Citrus Sinensis ID: 040292

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------
Protein Sequence
FCVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccEEEEcHHHHHHHHccccccccccccccEEEEEccccccHHHHHHHHHHHHHHcccccccEEcEEEcccEEEEEEEEEccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccccccccEEEcHHHHHHHHcccEEEEEEcccccEEEEEEcccccHHHHHHHHHHHHHHHcHcHHHEEEEEcccccEEEEEEEcccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHcHEEEccccEEEcccccccHHHHHHccccHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
fcvgymslslrtSNSLEKakerkfmpknGKFLLQKLIAScngkyypiRNFIALElegatnnydpgkgflqdhpisefgdnlnteeYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGtladrihdpngsqlepFLMKHRLKVAMEIANAVAYLHvgfsrpivfrdikpftthvndndkligtfgfiapecittgncneksdvYSFGALLLELLTGKKG
Flexible Loop (DISEMBL)
fcvgymslslrtsnslekakerkfmpknGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG
Low Complexity Region (SEG)
FCVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG
Disordered region (IsUnstruct)
***************************NGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT****
Disordered Region (DISOPRED)
FCVGYMSLSLRTSN*********************************RNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK**
Disordered Region (DISEMBL)
FCVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG
Disordered Region (DISPRO)
FCVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FCVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	227	2.2.26 [Sep-21-2011]
Q9LSV3	433	Putative wall-associated	yes	no	0.942	0.494	0.351	2e-35
Q9LMN6	738	Wall-associated receptor	no	no	0.929	0.285	0.351	3e-34
Q9LMN7	733	Wall-associated receptor	no	no	0.969	0.300	0.338	1e-33
Q39191	735	Wall-associated receptor	no	no	0.969	0.299	0.347	7e-33
Q7X8C5	748	Wall-associated receptor	no	no	0.894	0.271	0.369	1e-32
Q9LMN8	741	Wall-associated receptor	no	no	0.885	0.271	0.357	3e-32
Q9LMP1	732	Wall-associated receptor	no	no	0.969	0.300	0.341	2e-31
Q9SA25	720	Wall-associated receptor	no	no	0.894	0.281	0.349	1e-30
Q9S9M2	761	Wall-associated receptor	no	no	0.964	0.287	0.342	3e-30
Q9S9M3	730	Wall-associated receptor	no	no	0.863	0.268	0.360	4e-30

>sp|Q9LSV3|WAKLS_ARATH Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1

 Score =  149 bits (375), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 138/259 (53%), Gaps = 45/259 (17%)

Query: 9   SLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG--- 65
           ++R      K + + F  KNG  +L + ++         + F   +++ ATN YD     
Sbjct: 55  NIRKHQKDTKIQRQLFFEKNGGGMLIERLSGAGSSNIDFKIFTEEDMKEATNGYDVSRIL 114

Query: 66  ---------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCL 111
                    KG L D+ I     +  GDN   E++   N +   SQ++H+N++K +GCCL
Sbjct: 115 GQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQF--INEVLVLSQINHRNVVKLLGCCL 172

Query: 112 ETEVPILVFEFVACGTLADRIHDPNGSQ-LEPFLMKHRLKVAMEIANAVAYLHVGFSRPI 170
           ETEVP+LV+EF+  G+L D +H   GS  +     +HRL++A+E+A A+AYLH G S PI
Sbjct: 173 ETEVPLLVYEFITGGSLFDHLH---GSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPI 229

Query: 171 VFRDIKPFTTHVNDN----------------DK------LIGTFGFIAPECITTGNCNEK 208
           + RDIK     +++N                DK      + GT G++ PE  TT   NEK
Sbjct: 230 IHRDIKTENILLDENLTAKVADFGASKLKPMDKEQLTTMVQGTLGYLDPEYYTTWLLNEK 289

Query: 209 SDVYSFGALLLELLTGKKG 227
           SDVYSFG +L+EL++G+K 
Sbjct: 290 SDVYSFGVVLMELISGQKA 308

Putative serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: -

>sp|Q9LMN6|WAK4_ARATH Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1

 Score =  145 bits (365), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 45/256 (17%)

Query: 11  RTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG----- 65
           +  N+ +    ++F  +NG  +L + ++        ++ F    ++ AT+ YD       
Sbjct: 359 KMKNTKDTELRQQFFEQNGGGMLMQRLSGAGPSNVDVKIFTEEGMKEATDGYDENRILGQ 418

Query: 66  -------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLET 113
                  KG L D+ I     +  GDN   E++   N +   SQ++H+N++K +GCCLET
Sbjct: 419 GGQGTVYKGILPDNSIVAIKKARLGDNSQVEQF--INEVLVLSQINHRNVVKLLGCCLET 476

Query: 114 EVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAMEIANAVAYLHVGFSRPIVF 172
           EVP+LV+EF++ GTL D +H   GS  +  L  +HRL++A+EIA  +AYLH   S PI+ 
Sbjct: 477 EVPLLVYEFISSGTLFDHLH---GSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIH 533

Query: 173 RDIKPFTTHVNDN----------DKLI------------GTFGFIAPECITTGNCNEKSD 210
           RDIK     +++N           +LI            GT G++ PE   TG  NEKSD
Sbjct: 534 RDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSD 593

Query: 211 VYSFGALLLELLTGKK 226
           VYSFG +L+ELL+G+K
Sbjct: 594 VYSFGVVLMELLSGQK 609

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN7|WAK5_ARATH Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1

 Score =  142 bits (359), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 144/272 (52%), Gaps = 52/272 (19%)

Query: 3   VGYMSLSLRTSNSLEKAKERK-------FMPKNGKFLLQKLIASCNGKYYPIRNFIALEL 55
           +G++ + L  S   +K + RK       F  +NG  +L + ++        ++ F    +
Sbjct: 342 IGFLIILLTISYIQQKMRHRKNTELRQQFFEQNGGGMLIQRLSGAGPSNVDVKIFTEEGM 401

Query: 56  EGATNNYDPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQM 98
           + AT+ Y+              KG LQD+ I     +  GD    E++   N +   SQ+
Sbjct: 402 KEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQF--INEVLVLSQI 459

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAMEIAN 157
           +H+N++K +GCCLETEVP+LV+EF++ GTL D +H   GS  +  L  +HRL++A+E+A 
Sbjct: 460 NHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLH---GSMFDSSLTWEHRLRIAIEVAG 516

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDN----------DKLI------------GTFGFI 195
            +AYLH   S PI+ RD+K     +++N           +LI            GT G++
Sbjct: 517 TLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYL 576

Query: 196 APECITTGNCNEKSDVYSFGALLLELLTGKKG 227
            PE   TG  NEKSDVYSFG +L+ELL+G+K 
Sbjct: 577 DPEYYNTGLLNEKSDVYSFGVVLMELLSGEKA 608

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q39191|WAK1_ARATH Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2

 Score =  140 bits (353), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 137/265 (51%), Gaps = 45/265 (16%)

Query: 3   VGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNY 62
           +G   +  R  +  +     +F  +NG  +L + ++        ++ F    ++ ATN Y
Sbjct: 350 LGVACIQQRMKHLKDTKLREQFFEQNGGGMLTQRLSGAGPSNVDVKIFTEDGMKKATNGY 409

Query: 63  DPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILK 105
                          KG L D+ I     +  GD+   E++   N +   SQ++H+N++K
Sbjct: 410 AESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQF--INEVLVLSQINHRNVVK 467

Query: 106 FVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAMEIANAVAYLHV 164
            +GCCLETEVP+LV+EF+  GTL D +H   GS ++  L  +HRLK+A+E+A  +AYLH 
Sbjct: 468 LLGCCLETEVPLLVYEFITNGTLFDHLH---GSMIDSSLTWEHRLKIAIEVAGTLAYLHS 524

Query: 165 GFSRPIVFRDIKP--------FTTHVND--NDKLI------------GTFGFIAPECITT 202
             S PI+ RDIK          T  V D    +LI            GT G++ PE   T
Sbjct: 525 SASIPIIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNT 584

Query: 203 GNCNEKSDVYSFGALLLELLTGKKG 227
           G  NEKSDVYSFG +L+ELL+G+K 
Sbjct: 585 GLLNEKSDVYSFGVVLMELLSGQKA 609

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development. Required during plant's response to pathogen infection and in plant defense against heavy metal toxicity. Phosphorylates the oxygen-evolving enhancer protein 2 (OEE2) in an GRP-3-dependent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1

 Score =  139 bits (350), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 129/246 (52%), Gaps = 43/246 (17%)

Query: 20  KERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG------------KG 67
           + RKF  +NG  LL++ +A   G     R F + ELE AT+N++              KG
Sbjct: 374 RMRKFFRRNGGMLLKQQLARKEGNVEMSRIFSSHELEKATDNFNKNRVLGQGGQGTVYKG 433

Query: 68  FLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEF 122
            L D  I     S+  D    EE+   N +   +Q++H+NI+K +GCCLETEVP+LV+EF
Sbjct: 434 MLVDGRIVAVKRSKAVDEDRVEEF--INEVVVLAQINHRNIVKLLGCCLETEVPVLVYEF 491

Query: 123 VACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV 182
           V  G L  R+HD   S       + RL +A+EIA A++YLH   S PI  RDIK     +
Sbjct: 492 VPNGDLCKRLHDE--SDDYTMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILL 549

Query: 183 NDNDK----------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLE 220
           ++ ++                      + GTFG++ PE   +    EKSDVYSFG +L+E
Sbjct: 550 DERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVE 609

Query: 221 LLTGKK 226
           LLTG+K
Sbjct: 610 LLTGEK 615

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2

 Score =  138 bits (347), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/246 (35%), Positives = 132/246 (53%), Gaps = 45/246 (18%)

Query: 22  RKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG------------KGFL 69
           R+F  +NG  +L + ++         + F    ++ ATN YD              KG L
Sbjct: 375 RQFFEQNGGGMLIQRLSGAGLSNIDFKIFTEEGMKEATNGYDESRILGQGGQGTVYKGIL 434

Query: 70  QDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVA 124
            D+ I     +   D+   +++   + +   SQ++H+N++K +GCCLETEVP+LV+EF+ 
Sbjct: 435 PDNTIVAIKKARLADSRQVDQF--IHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFIT 492

Query: 125 CGTLADRIHDPNGSQLEPFL-MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN 183
            GTL D +H   GS  +  L  +HRL++A+E+A  +AYLH   S PI+ RDIK     ++
Sbjct: 493 NGTLFDHLH---GSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLD 549

Query: 184 DN----------DKLI------------GTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
           +N           KLI            GT G++ PE  TTG  NEKSDVYSFG +L+EL
Sbjct: 550 ENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMEL 609

Query: 222 LTGKKG 227
           L+G+K 
Sbjct: 610 LSGQKA 615

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMP1|WAK2_ARATH Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 139/272 (51%), Gaps = 52/272 (19%)

Query: 3   VGYMSLSLRTSNSLEKAKERK-------FMPKNGKFLLQKLIASCNGKYYPIRNFIALEL 55
           +G+  + L  S   +K K RK       F  +NG  +L + ++        ++ F    +
Sbjct: 338 IGFSVIMLGISCLQQKIKHRKNTELRQKFFEQNGGGMLIQRVSGAGPSNVDVKIFTEKGM 397

Query: 56  EGATNNYDPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQM 98
           + ATN Y               KG L D+ I     +  G+    E++   N +   SQ+
Sbjct: 398 KEATNGYHESRILGQGGQGTVYKGILPDNSIVAIKKARLGNRSQVEQF--INEVLVLSQI 455

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAMEIAN 157
           +H+N++K +GCCLETEVP+LV+EF+  GTL D +H   GS  +  L  +HRL++A E+A 
Sbjct: 456 NHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLH---GSLYDSSLTWEHRLRIATEVAG 512

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDN----------DKLI------------GTFGFI 195
           ++AYLH   S PI+ RDIK     ++ N           +LI            GT G++
Sbjct: 513 SLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYL 572

Query: 196 APECITTGNCNEKSDVYSFGALLLELLTGKKG 227
            PE   TG  NEKSDVYSFG +L+ELL+G+K 
Sbjct: 573 DPEYYNTGLLNEKSDVYSFGVVLMELLSGQKA 604

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1

 Score =  133 bits (334), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 131/246 (53%), Gaps = 43/246 (17%)

Query: 20  KERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG------------KG 67
           ++RKF  +NG  LLQ+  +  +G     + F + +LE AT+ ++              KG
Sbjct: 348 QKRKFFQRNGGLLLQQQTSFLHGSVNRTKVFSSNDLENATDRFNASRILGQGGQGTVYKG 407

Query: 68  FLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEF 122
            L+D  I     S+     N EE+   N I   SQ++H+N++K +GCCLETEVPILV+EF
Sbjct: 408 MLEDGMIVAVKKSKALKEENLEEF--INEIILLSQINHRNVVKILGCCLETEVPILVYEF 465

Query: 123 VACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV 182
           +    L D +H+P  S+  P   + RL +A E+A+A++YLH   S PI  RD+K     +
Sbjct: 466 IPNRNLFDHLHNP--SEDFPMSWEVRLCIACEVADALSYLHSAVSIPIYHRDVKSTNILL 523

Query: 183 NDNDK----------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLE 220
           ++  +                      + GT G++ PE + + +   KSDVYSFG LL+E
Sbjct: 524 DEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIE 583

Query: 221 LLTGKK 226
           LLTG+K
Sbjct: 584 LLTGEK 589

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 133/266 (50%), Gaps = 47/266 (17%)

Query: 1   FCVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATN 60
           F  G   L          ++ R F  +NG  LL++ +A   G     + F + ELE AT+
Sbjct: 363 FAFGIFGLYKFIKKQRRSSRMRVFFRRNGGMLLKQQLARKEGNVEMSKIFSSNELEKATD 422

Query: 61  NYDPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNI 103
           N++              KG L D  I     S+  D    EE+   N +   +Q++H+NI
Sbjct: 423 NFNTNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAMDEDKVEEF--INEVVVLAQINHRNI 480

Query: 104 LKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH--RLKVAMEIANAVAY 161
           +K +GCCLETEVP+LV+EFV  G L  R+ D    + + ++M    RL +A+EIA A++Y
Sbjct: 481 VKLLGCCLETEVPVLVYEFVPNGDLCKRLRD----ECDDYIMTWEVRLHIAIEIAGALSY 536

Query: 162 LHVGFSRPIVFRDIK--------PFTTHVND--------------NDKLIGTFGFIAPEC 199
           LH   S PI  RDIK         +   V+D                ++ GTFG++ PE 
Sbjct: 537 LHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEY 596

Query: 200 ITTGNCNEKSDVYSFGALLLELLTGK 225
             +    +KSDVYSFG +L+EL+TGK
Sbjct: 597 FQSSKFTDKSDVYSFGVVLVELITGK 622

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Plays a role in plant mineral nutrients response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2

 Score =  131 bits (329), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 133/247 (53%), Gaps = 51/247 (20%)

Query: 23  KFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNY-------DPGKG-----FLQ 70
           KF  +NG  LL++ + + +G     + F + ELE AT+N+         G+G      L 
Sbjct: 389 KFFKRNGGLLLKQQLTTKDGSVEMSKIFSSRELEKATDNFSIDRVLGQGGQGTVYKRMLV 448

Query: 71  DHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVAC 125
           D  I     S+  D    EE+   N I   SQ++H+NI+K +GCCLETEVPILV+E++  
Sbjct: 449 DGSIVAVKRSKVVDEDKMEEF--INEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPN 506

Query: 126 GTLADRIHDPNGSQLEPFLMKH--RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN 183
           G L  R+HD    + + ++M    RL++A+EIA A++Y+H   S PI  RDIK  TT++ 
Sbjct: 507 GDLFKRLHD----EYDDYMMTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIK--TTNIL 560

Query: 184 DNDK------------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLL 219
            ++K                        + GTFG++ PE   +     KSDVYSFG +L+
Sbjct: 561 LDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLV 620

Query: 220 ELLTGKK 226
           EL+TG+K
Sbjct: 621 ELITGEK 627

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
255582635	331	receptor protein kinase, putative [Ricin	0.916	0.628	0.467	6e-51
224123144	344	predicted protein [Populus trichocarpa]	0.955	0.630	0.445	1e-47
255542662	330	serine-threonine protein kinase, plant-t	0.859	0.590	0.433	3e-39
255542658	356	serine-threonine protein kinase, plant-t	0.881	0.561	0.423	1e-38
242071025	520	hypothetical protein SORBIDRAFT_05g01853	0.982	0.428	0.356	2e-35
224083492	666	predicted protein [Populus trichocarpa]	0.907	0.309	0.396	2e-35
242073744	576	hypothetical protein SORBIDRAFT_06g02299	0.955	0.376	0.360	3e-35
359495254	331	PREDICTED: wall-associated receptor kina	0.907	0.622	0.407	5e-35
297740943	321	unnamed protein product [Vitis vinifera]	0.889	0.629	0.409	1e-34
225460075	380	PREDICTED: wall-associated receptor kina	0.845	0.505	0.412	4e-34

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 116/248 (46%), Positives = 151/248 (60%), Gaps = 40/248 (16%)

Query: 17  EKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPGK---------- 66
           +KA+  +    NG+ LL+KLIASC+G+  PIR F A EL  AT++YDP K          
Sbjct: 4   KKAESERISLMNGRMLLEKLIASCDGRCNPIRIFSADELSRATDDYDPRKIITQDSGYKL 63

Query: 67  --GFLQDHPIS--EFGDNLNTEEY-YCFNCIAFASQMS-HKNILKFVGCCLETEVPILVF 120
             G L +  IS  +F D   +E+Y YC+N I FA+QMS HKN LK +GCCLET++P+LVF
Sbjct: 64  YNGLLHERTISVKKFKDK--SEQYKYCYNDIMFATQMSKHKNFLKLLGCCLETQIPVLVF 121

Query: 121 EFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTT 180
           E +  GTLA R++ PN +  +P L +HRLK+A+EIANAV+YLH  FSRPIVFR+IKP   
Sbjct: 122 EPIEYGTLAGRLYGPNKTLYQPLLWRHRLKIAVEIANAVSYLHTAFSRPIVFRNIKPLNI 181

Query: 181 HVND----------------------NDKLIGTFGFIAPECITTGNCNEKSDVYSFGALL 218
            +++                       D L G +G IAPE   T   NE  DVY+FG  L
Sbjct: 182 FLDECHVAKLSDFSLAVSIPEGESHVKDMLAGAWGLIAPEYAKTSCFNESQDVYNFGVFL 241

Query: 219 LELLTGKK 226
           L LLTG+K
Sbjct: 242 LMLLTGQK 249

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/258 (44%), Positives = 152/258 (58%), Gaps = 41/258 (15%)

Query: 6   MSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG 65
           MS    T    +  KE  F+ KNG  LL+KL+  C+GK   IR+F A EL+ ATNNYDP 
Sbjct: 1   MSTCWETKKDKKVNKETAFI-KNGSKLLEKLVDICDGKCNSIRSFSATELKKATNNYDPQ 59

Query: 66  K------------GFLQDHPIS--EFGDNLNTEEY-YCFNCIAFASQMS-HKNILKFVGC 109
           K            GFLQ  P+S  +F D+   E+Y YCFN I +AS+MS HK+ +K +GC
Sbjct: 60  KILTGDSGYKLYKGFLQGRPVSVKKFKDD--DEQYEYCFNDIVYASKMSVHKSFMKLLGC 117

Query: 110 CLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP 169
           CLE  +PILVFE+V   TL+D +     ++ +P L   R K+AM++ANAVA+LH  FS+P
Sbjct: 118 CLEARIPILVFEYVGDWTLSDFLWGSEEARCQPLLWIPRSKIAMDMANAVAFLHAAFSKP 177

Query: 170 IVFRDIKPFTTHVNDN----------------------DKLIGTFGFIAPECITTGNCNE 207
           IVFR+IKP    ++DN                      D + G  G IAPE +TTGN NE
Sbjct: 178 IVFRNIKPLNILLDDNHEAKLSDFSISISIPKGESHVRDSVAGATGLIAPEYLTTGNFNE 237

Query: 208 KSDVYSFGALLLELLTGK 225
           K DV++FG  LL LL+G+
Sbjct: 238 KQDVFNFGVFLLVLLSGQ 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/240 (43%), Positives = 127/240 (52%), Gaps = 45/240 (18%)

Query: 28  NGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG------------KGFLQDHPIS 75
           NG  LL+K +A CNG+  PIRNF + ELE AT NY+              KGFLQD P+ 
Sbjct: 10  NGSKLLEKSVAFCNGRCNPIRNFSSEELEKATRNYNEKQVLKLDGYFELYKGFLQDRPVI 69

Query: 76  -----EFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLA 129
                E G      E    N I +AS MS H N +K +GCCLET  PILVFE     TLA
Sbjct: 70  VKKFLEVG-----VEQLAINEIVYASAMSVHINSIKLLGCCLETPSPILVFESAKEKTLA 124

Query: 130 DRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN---- 185
           DRI D N    EP   K RLK+  +IAN V Y+H  F RPIV R+IK     ++++    
Sbjct: 125 DRIIDRNDDHFEPVKWKLRLKIVADIANVVVYIHTAFPRPIVHRNIKASNILLDEDYVAK 184

Query: 186 ------------------DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG 227
                             D + GT G IA E + TG  NEKSDVYSFG +LL +LTG++ 
Sbjct: 185 LSDFSLCVSIPEGKSRVRDIMAGTMGLIASESLATGYFNEKSDVYSFGVVLLVVLTGQRS 244

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/236 (42%), Positives = 130/236 (55%), Gaps = 36/236 (15%)

Query: 27  KNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG------------KGFLQDHPI 74
           +NG  LL+K IA  NG+  PIR F   EL+ ATN+Y               KGFL+D P+
Sbjct: 18  RNGGILLEKSIAFNNGRGNPIRWFSVDELQTATNSYSQNNVIYEGGWHTLYKGFLRDRPV 77

Query: 75  SEFGDNLNTEEYYC-FNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRI 132
                  N  E  C  N I FAS+MS HKN+LK +GCCLE+E+PILVFE+   G L D I
Sbjct: 78  IVKRYRNNIHERVCPINDIVFASEMSRHKNVLKLLGCCLESEIPILVFEYAEKGKLQDYI 137

Query: 133 HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND 184
           +  + +   P L K RLK+A++ AN +AYLH    RP+V RDI        + +   V D
Sbjct: 138 YKTDSASFRPLLWKSRLKIAVDAANVIAYLHTACPRPVVHRDITLSNIWLDEDYVAKVTD 197

Query: 185 --------------NDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                          D ++GT G+ APE + +G  NEK DV+SFG LLL LLT +K
Sbjct: 198 FTVSMSILEGETHIEDFVLGTCGYAAPEYVRSGIFNEKIDVFSFGVLLLVLLTDQK 253

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242071025|ref|XP_002450789.1| hypothetical protein SORBIDRAFT_05g018530 [Sorghum bicolor] gi|241936632|gb|EES09777.1| hypothetical protein SORBIDRAFT_05g018530 [Sorghum bicolor]

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 138/264 (52%), Gaps = 41/264 (15%)

Query: 2   CVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNN 61
           C  +  L  +  +S++K   +++  KN   LL++LI+S          F   ELE ATNN
Sbjct: 136 CNVFAILRRKWKSSVQKRLRKRYFHKNKGILLEQLISSDQSAGDGTNIFSHEELEKATNN 195

Query: 62  YDPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNIL 104
           +D              KG L D  +     S+    +  E+  C N ++  S ++H+N++
Sbjct: 196 FDRSRVVGHGGHGTVYKGILTDQRVVAIKRSKLVAEIEIEQ--CINEVSILSHVNHRNVV 253

Query: 105 KFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV 164
           K  GCCLETE+P+LV+EF++ GTL D +H      L P   + RL++++EIA+A+AYLH 
Sbjct: 254 KLYGCCLETEIPLLVYEFISNGTLYDILHREQNGALLPVSWEERLRISIEIASALAYLHS 313

Query: 165 GFSRPIVFRDIKPFTTHVNDN----------------------DKLIGTFGFIAPECITT 202
             S  I+ RD+K     +ND+                        + GTFG++ PE   T
Sbjct: 314 AASVSILHRDVKSMNILLNDSYIAKVSDFGASRSIPIDQTHLVTAVQGTFGYLDPEYYHT 373

Query: 203 GNCNEKSDVYSFGALLLELLTGKK 226
           G  NEKSDVYSFG +LLELLT KK
Sbjct: 374 GQLNEKSDVYSFGVILLELLTRKK 397

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083492|ref|XP_002307049.1| predicted protein [Populus trichocarpa] gi|222856498|gb|EEE94045.1| predicted protein [Populus trichocarpa]

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/252 (39%), Positives = 133/252 (52%), Gaps = 46/252 (18%)

Query: 19  AKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG------------K 66
           A+ ++    NG  L +KLI+S NG+YYP  NF   ELE ATNNY P             K
Sbjct: 3   AERKRLFITNGSLLQEKLISSSNGRYYPFHNFSIEELEKATNNYAPHCFLSYNLLGTWYK 62

Query: 67  GFLQ---------DHPISEFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLETEVP 116
           G L           +P  +   N    E    N +A A+Q+S  +N L+ +GCCLET VP
Sbjct: 63  GSLDGRVLSICIPRYPNVQASRNQIINE--IVNDVAIAAQLSRQRNFLRLIGCCLETPVP 120

Query: 117 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK 176
           +LV+E V  G ++++IH       +P   K RLK+A EIA+AV+YLH  FSRPIV R I 
Sbjct: 121 LLVYESVKRGNVSEQIHVTGEFHSQPMTWKCRLKIAREIAHAVSYLHTAFSRPIVHRGIN 180

Query: 177 PFTTHVND----------------------NDKLIGTFGFIAPECITTGNCNEKSDVYSF 214
           P    ++D                       D++IGT G++ PE +  G   EK DVYSF
Sbjct: 181 PLNIFLDDYNVAKLSNFSQSLYICEDEIIKTDRIIGTLGYLPPEYLEHGEITEKFDVYSF 240

Query: 215 GALLLELLTGKK 226
           G LLLELLTG++
Sbjct: 241 GTLLLELLTGRR 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242073744|ref|XP_002446808.1| hypothetical protein SORBIDRAFT_06g022990 [Sorghum bicolor] gi|241937991|gb|EES11136.1| hypothetical protein SORBIDRAFT_06g022990 [Sorghum bicolor]

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 136/258 (52%), Gaps = 41/258 (15%)

Query: 8   LSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG-- 65
           L  +  +S++K   +++  KN   LL++LI+S          F   ELE ATNN+D    
Sbjct: 198 LRRKWKSSVQKRLRKRYFHKNKGILLEQLISSDQSAGDGTNIFSHEELEKATNNFDRSRV 257

Query: 66  ----------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCC 110
                     KG L D  +     S+    +  E+  C N ++  S ++H+N++K  GCC
Sbjct: 258 VGHGGHGTVYKGILTDQRVVAIKRSKLVAEIEIEQ--CINEVSILSHVNHRNVVKLYGCC 315

Query: 111 LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPI 170
           LETE+P+LV+EF++ GTL D +H      L P   + RL++++EIA+A+AYLH   S  I
Sbjct: 316 LETEIPLLVYEFISNGTLYDILHREQNGALLPVSWEERLRISIEIASALAYLHSAASVSI 375

Query: 171 VFRDIKPFTTHVNDN----------------------DKLIGTFGFIAPECITTGNCNEK 208
           + RD+K     +ND+                        + GTFG++ PE   TG  NEK
Sbjct: 376 LHRDVKSMNILLNDSYIAKVSDFGASRSIPIDQTHLVTAVQGTFGYLDPEYYHTGQLNEK 435

Query: 209 SDVYSFGALLLELLTGKK 226
           SDVYSFG +LLELLT KK
Sbjct: 436 SDVYSFGVILLELLTRKK 453

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495254|ref|XP_002271826.2| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/248 (40%), Positives = 138/248 (55%), Gaps = 42/248 (16%)

Query: 17  EKAKERKFMPKNGKFLLQKLIASCNGKYY-PIRNFIALELEGATNNYDPG---------- 65
            K  +++ M KNG  LL++ I+  NGKY+ PIR+F   EL+ AT++Y+ G          
Sbjct: 6   RKEMKKESMLKNGSLLLKERISYFNGKYFNPIRSFCMKELQNATDDYNTGLIFDHDVGNC 65

Query: 66  ---KGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFE 121
              KG L+   IS    N         N I  ASQMS HKN LK +GCCLET +PILV+E
Sbjct: 66  IWYKGSLEGRTIS-VRTNFYEGVEMAINEIVIASQMSAHKNALKLLGCCLETRIPILVYE 124

Query: 122 FVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH 181
           F + G+L DRI  P      P   K RL++A +IAN +AYLH+ F R I+  DIKP +  
Sbjct: 125 FPSGGSLIDRIFSPPN----PLSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFF 180

Query: 182 VNDN----------------------DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLL 219
           ++ +                      D++ GTFG++APE + +G   EK+DV+SFG LLL
Sbjct: 181 LDQDCAAKLSDFSLSITLPEGEMHVEDEIRGTFGYLAPETLISGVYTEKNDVFSFGILLL 240

Query: 220 ELLTGKKG 227
           ELL GK+ 
Sbjct: 241 ELLIGKRA 248

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740943|emb|CBI31255.3| unnamed protein product [Vitis vinifera]

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/244 (40%), Positives = 137/244 (56%), Gaps = 42/244 (17%)

Query: 21  ERKFMPKNGKFLLQKLIASCNGKYY-PIRNFIALELEGATNNYDPG-------------K 66
           +++ M KNG  LL++ I+  NGKY+ PIR+F   EL+ AT++Y+ G             K
Sbjct: 2   KKESMLKNGSLLLKERISYFNGKYFNPIRSFCMKELQNATDDYNTGLIFDHDVGNCIWYK 61

Query: 67  GFLQDHPISEFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVAC 125
           G L+   IS    N         N I  ASQMS HKN LK +GCCLET +PILV+EF + 
Sbjct: 62  GSLEGRTIS-VRTNFYEGVEMAINEIVIASQMSAHKNALKLLGCCLETRIPILVYEFPSG 120

Query: 126 GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN 185
           G+L DRI  P      P   K RL++A +IAN +AYLH+ F R I+  DIKP +  ++ +
Sbjct: 121 GSLIDRIFSPPN----PLSWKSRLRIAYDIANVIAYLHIAFPRSIIHTDIKPSSFFLDQD 176

Query: 186 ----------------------DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                                 D++ GTFG++APE + +G   EK+DV+SFG LLLELL 
Sbjct: 177 CAAKLSDFSLSITLPEGEMHVEDEIRGTFGYLAPETLISGVYTEKNDVFSFGILLLELLI 236

Query: 224 GKKG 227
           GK+ 
Sbjct: 237 GKRA 240

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225460075|ref|XP_002271888.1| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/250 (41%), Positives = 132/250 (52%), Gaps = 58/250 (23%)

Query: 25  MPKNGKFLLQKLIASCNGKYY-PIRNFIALELEGATNN--------------YDPGKGFL 69
           M KNG  LL+K I+   G+Y  PI NF   E++ AT+N              Y   KG L
Sbjct: 16  MLKNGSLLLEKRISYFGGRYSNPIHNFSIQEIQRATDNFNGNLIFNDDVSSFYKWYKGSL 75

Query: 70  QDHPI-------SEFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFE 121
           +   I       S F +N         N IA A+QMS HKN LK +GCCLET VPILV+E
Sbjct: 76  EGRVICIRKIFRSSFAENPQI----VTNEIAVATQMSSHKNALKLLGCCLETRVPILVYE 131

Query: 122 FVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPF--- 178
           F +C  LA++I D N    EPF +K RLK+A EIA+ +AYLH  F RPI+ RDIKP    
Sbjct: 132 FSSCEPLAEKIFDCN----EPFPLKGRLKIAYEIASVIAYLHTAFPRPIIHRDIKPHHFF 187

Query: 179 ---------------------TTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGAL 217
                                 T V D  +  GT G++APE + +    EK+DV+SFG L
Sbjct: 188 LDNGSTPKLSNFELSIALPEGETRVKDVPR--GTLGYLAPE-LFSWEYTEKTDVFSFGTL 244

Query: 218 LLELLTGKKG 227
           +LELLT ++ 
Sbjct: 245 ILELLTRRRA 254

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	227
TAIR|locus:2094468	433	AT3G25490 [Arabidopsis thalian	0.814	0.427	0.338	5.8e-35
TAIR|locus:2014952	738	WAK4 "wall associated kinase 4	0.784	0.241	0.331	5.7e-33
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.519	0.332	0.393	1.4e-32
TAIR|locus:2014962	733	WAK5 "wall associated kinase 5	0.810	0.251	0.319	5.2e-32
TAIR|locus:2076586	351	AT3G57710 [Arabidopsis thalian	0.418	0.270	0.43	6.5e-32
TAIR|locus:2014902	735	WAK1 "cell wall-associated kin	0.744	0.229	0.333	1.4e-31
TAIR|locus:2200562	748	WAKL2 "wall associated kinase-	0.832	0.252	0.345	2.5e-31
TAIR|locus:2076681	359	AT3G57720 [Arabidopsis thalian	0.519	0.328	0.370	2.7e-31
TAIR|locus:2014897	741	WAK3 "wall associated kinase 3	0.735	0.225	0.329	1.4e-30
TAIR|locus:2014912	732	WAK2 "wall-associated kinase 2	0.819	0.254	0.314	1.7e-30

TAIR|locus:2094468 AT3G25490 [Arabidopsis thaliana (taxid:3702)]

 Score = 281 (104.0 bits), Expect = 5.8e-35, Sum P(2) = 5.8e-35
 Identities = 71/210 (33%), Positives = 112/210 (53%)

Query:     3 VGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNY 62
             + Y+  ++R      K + + F  KNG  +L + ++         + F   +++ ATN Y
Sbjct:    50 ISYIK-NIRKHQKDTKIQRQLFFEKNGGGMLIERLSGAGSSNIDFKIFTEEDMKEATNGY 108

Query:    63 DPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILK 105
             D              KG L D+ I     +  GDN   E++   N +   SQ++H+N++K
Sbjct:   109 DVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQF--INEVLVLSQINHRNVVK 166

Query:   106 FVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM-KHRLKVAMEIANAVAYLHV 164
              +GCCLETEVP+LV+EF+  G+L D +H   GS     L  +HRL++A+E+A A+AYLH 
Sbjct:   167 LLGCCLETEVPLLVYEFITGGSLFDHLH---GSMFVSSLTWEHRLEIAIEVAGAIAYLHS 223

Query:   165 GFSRPIVFRDIKPFTTHVNDN-DKLIGTFG 193
             G S PI+ RDIK     +++N    +  FG
Sbjct:   224 GASIPIIHRDIKTENILLDENLTAKVADFG 253

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2014952 WAK4 "wall associated kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 5.7e-33, Sum P(2) = 5.7e-33
 Identities = 67/202 (33%), Positives = 109/202 (53%)

Query:    11 RTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG----- 65
             +  N+ +    ++F  +NG  +L + ++        ++ F    ++ AT+ YD       
Sbjct:   359 KMKNTKDTELRQQFFEQNGGGMLMQRLSGAGPSNVDVKIFTEEGMKEATDGYDENRILGQ 418

Query:    66 -------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLET 113
                    KG L D+ I     +  GDN   E++   N +   SQ++H+N++K +GCCLET
Sbjct:   419 GGQGTVYKGILPDNSIVAIKKARLGDNSQVEQF--INEVLVLSQINHRNVVKLLGCCLET 476

Query:   114 EVPILVFEFVACGTLADRIHDPNGSQLEPFLM-KHRLKVAMEIANAVAYLHVGFSRPIVF 172
             EVP+LV+EF++ GTL D +H   GS  +  L  +HRL++A+EIA  +AYLH   S PI+ 
Sbjct:   477 EVPLLVYEFISSGTLFDHLH---GSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIH 533

Query:   173 RDIKPFTTHVNDN-DKLIGTFG 193
             RDIK     +++N    +  FG
Sbjct:   534 RDIKTANILLDENLTAKVADFG 555

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA;IMP

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 199 (75.1 bits), Expect = 1.4e-32, Sum P(3) = 1.4e-32
 Identities = 50/127 (39%), Positives = 73/127 (57%)

Query:    66 KGFLQD--HPISEFGDNLNTEEYYC--FNCIAFASQMS-HKNILKFVGCCLETEVPILVF 120
             KG ++D  + I  F +   T+      +  I  +++MS H N LK +GCCLE   P+LVF
Sbjct:    83 KGVIEDRSYMIKRFSEYKVTDYRVSEVYKDIVLSARMSNHNNFLKLLGCCLEFPFPVLVF 142

Query:   121 EFVACGTLADRIH-DPNGSQ-LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPF 178
             EF   G L  R     NG + L P  +  RLK+  EIANA+AYLH+ F + I++RD+KP 
Sbjct:   143 EFAEHGVLNYRGGITVNGEESLLPLSL--RLKIGKEIANALAYLHMAFPKIIIYRDVKPL 200

Query:   179 TTHVNDN 185
                +++N
Sbjct:   201 HVFLDNN 207

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2014962 WAK5 "wall associated kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
 Identities = 67/210 (31%), Positives = 112/210 (53%)

Query:     3 VGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNY 62
             + Y+   +R   + E  +++ F    G  L+Q+L +        ++ F    ++ AT+ Y
Sbjct:   351 ISYIQQKMRHRKNTE-LRQQFFEQNGGGMLIQRL-SGAGPSNVDVKIFTEEGMKEATDGY 408

Query:    63 DPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILK 105
             +              KG LQD+ I     +  GD    E++   N +   SQ++H+N++K
Sbjct:   409 NESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQF--INEVLVLSQINHRNVVK 466

Query:   106 FVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM-KHRLKVAMEIANAVAYLHV 164
              +GCCLETEVP+LV+EF++ GTL D +H   GS  +  L  +HRL++A+E+A  +AYLH 
Sbjct:   467 LLGCCLETEVPLLVYEFISSGTLFDHLH---GSMFDSSLTWEHRLRIAIEVAGTLAYLHS 523

Query:   165 GFSRPIVFRDIKPFTTHVNDN-DKLIGTFG 193
               S PI+ RD+K     +++N    +  FG
Sbjct:   524 YASIPIIHRDVKTANILLDENLTAKVADFG 553

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2076586 AT3G57710 [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 6.5e-32, Sum P(3) = 6.5e-32
 Identities = 43/100 (43%), Positives = 60/100 (60%)

Query:    89 FNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHD-PNGSQ-LEPFLM 145
             +N I  +++MS H N L+ +GCCLE   P+LVFEF   G +  R     NG + L P+ +
Sbjct:   105 YNDIVLSARMSNHSNFLQLLGCCLEFPFPVLVFEFAEHGAMNQRGGVIVNGEESLLPWSV 164

Query:   146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN 185
               RLK+  EIANAV YLH  F + I+ RD+KP    ++ N
Sbjct:   165 --RLKIGKEIANAVTYLHTAFPKIIIHRDVKPMHVFLDKN 202

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2014902 WAK1 "cell wall-associated kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 260 (96.6 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
 Identities = 64/192 (33%), Positives = 102/192 (53%)

Query:     3 VGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNY 62
             +G   +  R  +  +     +F  +NG  +L + ++        ++ F    ++ ATN Y
Sbjct:   350 LGVACIQQRMKHLKDTKLREQFFEQNGGGMLTQRLSGAGPSNVDVKIFTEDGMKKATNGY 409

Query:    63 DPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILK 105
                            KG L D+ I     +  GD+   E++   N +   SQ++H+N++K
Sbjct:   410 AESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQF--INEVLVLSQINHRNVVK 467

Query:   106 FVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM-KHRLKVAMEIANAVAYLHV 164
              +GCCLETEVP+LV+EF+  GTL D +H   GS ++  L  +HRLK+A+E+A  +AYLH 
Sbjct:   468 LLGCCLETEVPLLVYEFITNGTLFDHLH---GSMIDSSLTWEHRLKIAIEVAGTLAYLHS 524

Query:   165 GFSRPIVFRDIK 176
               S PI+ RDIK
Sbjct:   525 SASIPIIHRDIK 536

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0007166 "cell surface receptor signaling pathway" evidence=IPI

GO:0005773 "vacuole" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009615 "response to virus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0009505 "plant-type cell wall" evidence=IDA

TAIR|locus:2200562 WAKL2 "wall associated kinase-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 259 (96.2 bits), Expect = 2.5e-31, Sum P(2) = 2.5e-31
 Identities = 73/211 (34%), Positives = 108/211 (51%)

Query:     1 FCVGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATN 60
             F  G   L        +  + RKF  +NG  LL++ +A   G     R F + ELE AT+
Sbjct:   355 FAFGIFGLYKFVQKRRKLIRMRKFFRRNGGMLLKQQLARKEGNVEMSRIFSSHELEKATD 414

Query:    61 NYDPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNI 103
             N++              KG L D  I     S+  D    EE+   N +   +Q++H+NI
Sbjct:   415 NFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEF--INEVVVLAQINHRNI 472

Query:   104 LKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH 163
             +K +GCCLETEVP+LV+EFV  G L  R+HD +      + +  RL +A+EIA A++YLH
Sbjct:   473 VKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEV--RLHIAIEIAGALSYLH 530

Query:   164 VGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG 193
                S PI  RDIK     +++ ++  +  FG
Sbjct:   531 SAASFPIYHRDIKTTNILLDERNRAKVSDFG 561

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2076681 AT3G57720 [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 2.7e-31, Sum P(3) = 2.7e-31
 Identities = 47/127 (37%), Positives = 71/127 (55%)

Query:    66 KGFLQD--HPISEFGDNLNTEEYYC--FNCIAFASQMS-HKNILKFVGCCLETEVPILVF 120
             KG ++D  + I  F +   T+      +N I  +++MS H N LK +G CLE  +P+LVF
Sbjct:    86 KGIIEDRSYMIKRFSEYKVTQYRVAEVYNEIVLSARMSNHNNFLKLIGFCLEFSLPVLVF 145

Query:   121 EFVACGTLADRIHD-PNGSQ-LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPF 178
             E+   G L  R     NG + + P  +  RLK+  EIANAV YLH+ F + ++ R IKP 
Sbjct:   146 EYAEHGVLNHRGGVIVNGEEVILPLSL--RLKIGKEIANAVTYLHMAFPKILIHRHIKPR 203

Query:   179 TTHVNDN 185
                +++N
Sbjct:   204 NVFLDEN 210

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2014897 WAK3 "wall associated kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 246 (91.7 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
 Identities = 63/191 (32%), Positives = 102/191 (53%)

Query:    22 RKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNYDPG------------KGFL 69
             R+F  +NG  +L + ++         + F    ++ ATN YD              KG L
Sbjct:   375 RQFFEQNGGGMLIQRLSGAGLSNIDFKIFTEEGMKEATNGYDESRILGQGGQGTVYKGIL 434

Query:    70 QDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVA 124
              D+ I     +   D+   +++   + +   SQ++H+N++K +GCCLETEVP+LV+EF+ 
Sbjct:   435 PDNTIVAIKKARLADSRQVDQF--IHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFIT 492

Query:   125 CGTLADRIHDPNGSQLEPFLM-KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN 183
              GTL D +H   GS  +  L  +HRL++A+E+A  +AYLH   S PI+ RDIK     ++
Sbjct:   493 NGTLFDHLH---GSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLD 549

Query:   184 DN-DKLIGTFG 193
             +N    +  FG
Sbjct:   550 ENLTAKVADFG 560

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2014912 WAK2 "wall-associated kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
 Identities = 66/210 (31%), Positives = 106/210 (50%)

Query:     3 VGYMSLSLRTSNSLEKAKERKFMPKNGKFLLQKLIASCNGKYYPIRNFIALELEGATNNY 62
             +G   L  +  +       +KF  +NG  +L + ++        ++ F    ++ ATN Y
Sbjct:   345 LGISCLQQKIKHRKNTELRQKFFEQNGGGMLIQRVSGAGPSNVDVKIFTEKGMKEATNGY 404

Query:    63 DPG------------KGFLQDHPI-----SEFGDNLNTEEYYCFNCIAFASQMSHKNILK 105
                            KG L D+ I     +  G+    E++   N +   SQ++H+N++K
Sbjct:   405 HESRILGQGGQGTVYKGILPDNSIVAIKKARLGNRSQVEQF--INEVLVLSQINHRNVVK 462

Query:   106 FVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM-KHRLKVAMEIANAVAYLHV 164
              +GCCLETEVP+LV+EF+  GTL D +H   GS  +  L  +HRL++A E+A ++AYLH 
Sbjct:   463 VLGCCLETEVPLLVYEFINSGTLFDHLH---GSLYDSSLTWEHRLRIATEVAGSLAYLHS 519

Query:   165 GFSRPIVFRDIKPFTTHVNDN-DKLIGTFG 193
               S PI+ RDIK     ++ N    +  FG
Sbjct:   520 SASIPIIHRDIKTANILLDKNLTAKVADFG 549

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009751 "response to salicylic acid stimulus" evidence=IDA

GO:0009311 "oligosaccharide metabolic process" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009992 "cellular water homeostasis" evidence=IMP;IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016226 "iron-sulfur cluster assembly" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	227
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-24
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-23
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-22
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-21
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-20
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-20
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	6e-20
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-18
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-17
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-13
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-12
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-12
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-12
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-12
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	3e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	7e-11
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-10
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-09
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-09
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-09
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-09
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	5e-09
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-09
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-09
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	6e-09
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	8e-09
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-08
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-08
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-08
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-08
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-08
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-08
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	7e-08
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	9e-08
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-07
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-07
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-07
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-07
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	4e-07
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	5e-07
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-07
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	8e-07
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-06
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	2e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-06
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	4e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-06
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	6e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	8e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-05
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	1e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	3e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-05
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-05
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-05
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-05
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	4e-05
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-05
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	5e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	7e-05
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	8e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	1e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-04
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	2e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-04
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-04
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	2e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	3e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	3e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	4e-04
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-04
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	4e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	5e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	6e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	6e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	7e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	8e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	8e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	8e-04
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	9e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.001
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	0.001
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.001
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	0.001
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.001
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.001
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.002
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.002
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	0.002
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	0.002
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.002
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	0.002
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.002
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	0.002
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.003
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.003
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.003
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.004
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	0.004
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.004
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.004
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 95.4 bits (238), Expect = 3e-24
 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 30/166 (18%)

Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           ++ ++        I    +++H NI+K  G   +     LV E+   G+L D + +  G 
Sbjct: 29  EDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGK 88

Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------------- 177
             E  ++    ++ ++I   + YLH   S  I+ RD+KP                     
Sbjct: 89  LSEDEIL----RILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSK 141

Query: 178 -FTTHVNDNDKLIGTFGFIAPECIT-TGNCNEKSDVYSFGALLLEL 221
             T+  +    ++GT  ++APE +   G  +EKSD++S G +L EL
Sbjct: 142 LLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 94.5 bits (236), Expect = 1e-23
 Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 30/152 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            ++SH NI++ +G C + E   +V E++  G L D +        E   +K  L++A++I
Sbjct: 56  KKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHG----EKLTLKDLLQMALQI 111

Query: 156 ANAVAYLHVGFSRPIVFRDI--------KPFT----------THVNDNDKLIGTFGFI-- 195
           A  + YL    S+  V RD+        +                 D+       G +  
Sbjct: 112 AKGMEYLE---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPI 168

Query: 196 ---APECITTGNCNEKSDVYSFGALLLELLTG 224
              APE +  G    KSDV+SFG LL E+ T 
Sbjct: 169 KWMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 91.8 bits (229), Expect = 1e-22
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 28/154 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    ++ H NI++      + +   LV E+   G L D +                   
Sbjct: 48  IKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRG-----RLSEDEARFY 102

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKL---IGT 191
             +I +A+ YLH   S+ IV RD+KP                     ++  +KL   +GT
Sbjct: 103 LRQILSALEYLH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGT 159

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             ++APE +      +  D++S G +L ELLTGK
Sbjct: 160 PEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 89.1 bits (222), Expect = 1e-21
 Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 36/158 (22%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEP--FLMKHRLKV 151
            ++ H N+++ +G C E E   LV E++  G L D  R   P     E     +K  L  
Sbjct: 51  KKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSF 110

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTH---VNDNDKL-IGTFGF------------- 194
           A++IA  + YL    S+  V RD+         V ++  + I  FG              
Sbjct: 111 AIQIAKGMEYLA---SKKFVHRDL---AARNCLVGEDLVVKISDFGLSRDVYDDDYYRKK 164

Query: 195 ---------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                    +APE +  G    KSDV+SFG LL E+ T
Sbjct: 165 TGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 86.4 bits (215), Expect = 1e-20
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 29/150 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            ++ H N++K +G C E E   +V E++  G L   +            +   L  A++I
Sbjct: 56  RKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNR----PKLSLSDLLSFALQI 111

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------- 193
           A  + YL    S+  + RD+      V +N  + I  FG                     
Sbjct: 112 ARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIR 168

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G    KSDV+SFG LL E+ T
Sbjct: 169 WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 86.4 bits (215), Expect = 2e-20
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 28/150 (18%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            ++ H NI+K +G C E E  ++V E++  G L D +      +L    +   L  A++I
Sbjct: 56  RKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELS---LSDLLSFALQI 112

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------- 193
           A  + YL    S+  + RD+      V +N  + I  FG                     
Sbjct: 113 ARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIR 169

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G    KSDV+SFG LL E+ T
Sbjct: 170 WMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 84.9 bits (211), Expect = 6e-20
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 33/159 (20%)

Query: 92  IAFASQMSHKNILKFVGCCL-ETEVPILVF-EFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           I   S + H NI+++ G    E +  + +F E+V+ G+L+  +      +L   +++   
Sbjct: 50  IRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLK--KFGKLPEPVIRKYT 107

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP---------------FTT--HVNDNDK----- 187
           +   +I   +AYLH   S  IV RDIK                F     + D +      
Sbjct: 108 R---QILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTG 161

Query: 188 -LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            + GT  ++APE I        +D++S G  ++E+ TGK
Sbjct: 162 SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGK 200

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 78.8 bits (195), Expect = 9e-18
 Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 30/150 (20%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           +SH NI++ +    + +   LV E+   G L D +     S+  P       K+A++I  
Sbjct: 55  LSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYL-----SRGGPLSEDEAKKIALQILR 109

Query: 158 AVAYLHVGFSRPIVFRDIKP--FTTHVNDNDKLI-------------------GTFGFIA 196
            + YLH   S  I+ RD+KP       N   K+                    GT  ++A
Sbjct: 110 GLEYLH---SNGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMA 166

Query: 197 PECITTGN-CNEKSDVYSFGALLLELLTGK 225
           PE +  GN    K DV+S G +L ELLTGK
Sbjct: 167 PEVLLGGNGYGPKVDVWSLGVILYELLTGK 196

Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 77.2 bits (191), Expect = 4e-17
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 27/154 (17%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    +  H NI+K+ G  L+ +   +V EF + G+L D +     S  +         V
Sbjct: 48  IQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLK----STNQTLTESQIAYV 103

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVND---NDKLIGT 191
             E+   + YLH   S  I+ RDIK                   +  ++D    + ++GT
Sbjct: 104 CKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGT 160

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             ++APE I     + K+D++S G   +EL  GK
Sbjct: 161 PYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 66.7 bits (163), Expect = 3e-13
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 36/164 (21%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDP-------NGSQLEPFLMK 146
           +   H+NI+KF G C E + PI+VFE++  G L    R H P         S +    + 
Sbjct: 63  TNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------ 193
             L++A++IA+ + YL    S+  V RD+      V  +  + IG FG            
Sbjct: 123 QLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYR 179

Query: 194 ----------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                     ++ PE I       +SDV+SFG +L E+ T GK+
Sbjct: 180 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQ 223

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 31/150 (20%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L T   ++V E    G+L DR+       L  FL+      A++IAN
Sbjct: 53  LDHENLIRLYGVVL-THPLMMVTELAPLGSLLDRLRKD---ALGHFLISTLCDYAVQIAN 108

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +  +DK+ IG FG +                     
Sbjct: 109 GMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFA 165

Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SDV+ FG  L E+ T
Sbjct: 166 WCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 64.8 bits (159), Expect = 1e-12
 Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 29/154 (18%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            +++H NI+K+     E     +V E+   G L+ +I        +PF  +  L   +++
Sbjct: 54  KKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEG-KPFPEEQILDWFVQL 112

Query: 156 ANAVAYLHVGFSRPIVFRDIKP---FTTHVNDNDKLIGTFGF------------------ 194
             A+ YLH   SR I+ RDIKP   F T  ++    +G FG                   
Sbjct: 113 CLALKYLH---SRKILHRDIKPQNIFLT--SNGLVKLGDFGISKVLSSTVDLAKTVVGTP 167

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
             ++PE       N KSD++S G +L EL T K 
Sbjct: 168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 65.5 bits (158), Expect = 2e-12
 Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 36/158 (22%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA 158
              NI+K      +     LV E+V  G+L D +      +  P      L +  +I +A
Sbjct: 56  HPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLK--KIGRKGPLSESEALFILAQILSA 113

Query: 159 VAYLHVGFSRPIVFRDIKP----------------------------FTTHVNDNDKLIG 190
           + YLH   S+ I+ RDIKP                             ++        +G
Sbjct: 114 LEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVG 170

Query: 191 TFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           T G++APE +   +       SD++S G  L ELLTG 
Sbjct: 171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGL 208

Length = 384

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 63.2 bits (154), Expect = 6e-12
 Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 51/161 (31%)

Query: 98  MSHKNILKFVGCCLETEVPI--LVFEFVACGTLADRIHDPNGSQLEPFLMKHR------- 148
           + H+NI+K+ G C +       L+ E++  G+L D            +L +HR       
Sbjct: 63  LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRD------------YLQRHRDQINLKR 110

Query: 149 -LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--IGTFG------------ 193
            L  + +I   + YL    S+  + RD+      V +++ L  I  FG            
Sbjct: 111 LLLFSSQICKGMDYLG---SQRYIHRDLAARNILV-ESEDLVKISDFGLAKVLPEDKDYY 166

Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                      + APEC+ T   +  SDV+SFG  L EL T
Sbjct: 167 YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 62.2 bits (151), Expect = 3e-11
 Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 34/157 (21%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM---- 145
           + IA   ++ H NI+K +G C   +   L+ E++             G  L   L     
Sbjct: 732 SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI------------EGKNLSEVLRNLSW 779

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-----------------DNDKL 188
           + R K+A+ IA A+ +LH   S  +V  ++ P    ++                 D    
Sbjct: 780 ERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCF 839

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           I +  ++APE   T +  EKSD+Y FG +L+ELLTGK
Sbjct: 840 ISS-AYVAPETRETKDITEKSDIYGFGLILIELLTGK 875

Length = 968

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 59.6 bits (145), Expect = 7e-11
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 29/155 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I     + H NI+K++G    ++   ++ E+   G+L   I    G   E  +  +   V
Sbjct: 50  IDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIK-KFGPFPESLVAVY---V 105

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------F--TTHVNDNDK----LIG 190
             ++   +AYLH    + ++ RDIK                F   T +ND  K    ++G
Sbjct: 106 Y-QVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVG 161

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE I     +  SD++S G  ++ELLTG 
Sbjct: 162 TPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGN 196

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 59.1 bits (143), Expect = 2e-10
 Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 41/155 (26%)

Query: 98  MSHKNILKFVGCCLET--EVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAM 153
           + H+NI+K+ GCC E   +   L+ E+V  G+L D +  H  N +QL  F        A 
Sbjct: 63  LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLF--------AQ 114

Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--IGTFG------------------ 193
           +I   +AYLH   S+  + RD+      + DND+L  IG FG                  
Sbjct: 115 QICEGMAYLH---SQHYIHRDLAARNVLL-DNDRLVKIGDFGLAKAVPEGHEYYRVREDG 170

Query: 194 -----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                + A EC+     +  SDV+SFG  L ELLT
Sbjct: 171 DSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 36/161 (22%)

Query: 95  ASQM----SHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHR 148
           AS M     H ++++ +G     +  ++V E +A G L    R   P             
Sbjct: 60  ASVMKEFNCH-HVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL 118

Query: 149 LKV---AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF---------- 194
            K    A EIA+ +AYL    ++  V RD+      V ++  + IG FG           
Sbjct: 119 QKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY 175

Query: 195 ------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                       +APE +  G    KSDV+SFG +L E+ T
Sbjct: 176 RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMAT 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 57.9 bits (140), Expect = 3e-10
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 30/151 (19%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q  H NI+K +G C++ +   +V E V  G+L   +     ++L    +K  L+++++ A
Sbjct: 48  QYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKK-KNRLT---VKKLLQMSLDAA 103

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------- 193
             + YL    S+  + RD+      V +N+ L I  FG                      
Sbjct: 104 AGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK 160

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           + APE +  G    +SDV+S+G LL E  + 
Sbjct: 161 WTAPEALNYGRYTSESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H  +++    C E E PI +V E+++ G+L D +    G +L    +   + +A +I
Sbjct: 57  KLRHDKLVQLYAVCSEEE-PIYIVTEYMSKGSLLDFLKSGEGKKL---RLPQLVDMAAQI 112

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------- 193
           A  +AYL    SR  + RD+      V +N    I  FG                     
Sbjct: 113 AEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIK 169

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE    G    KSDV+SFG LL E++T
Sbjct: 170 WTAPEAANYGRFTIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 24/147 (16%)

Query: 93  AFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 152
           +  + + H N+++ +G  L+     +V E++A G+L D +     + +    +  +L  A
Sbjct: 52  SVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVIT---LAQQLGFA 108

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-KLIGTFG-----------------F 194
           +++   + YL     +  V RD+      V+++    +  FG                 +
Sbjct: 109 LDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKW 165

Query: 195 IAPECITTGNCNEKSDVYSFGALLLEL 221
            APE +     + KSDV+SFG LL E+
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 27/151 (17%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           +++    I+++    L+     +V E+   G L   +    G  L    +    +  ++I
Sbjct: 54  AKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQV---WRFFIQI 110

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------F 194
              +A+LH   S+ I+ RDIK     ++  D   IG  G                    +
Sbjct: 111 LLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYY 167

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           ++PE       NEKSDV++ G +L E  TGK
Sbjct: 168 LSPELCEDKPYNEKSDVWALGVVLYECCTGK 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 55.8 bits (134), Expect = 2e-09
 Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 37/163 (22%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLE--------PFLMKH 147
           + H++I++F G C E    ++VFE++  G L    R H P+   L            +  
Sbjct: 64  LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQ 123

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------- 193
            L +A +IA+ + YL    S   V RD+      V     + IG FG             
Sbjct: 124 MLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 180

Query: 194 ---------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                    ++ PE I       +SD++SFG +L E+ T GK+
Sbjct: 181 GGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQ 223

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 31/166 (18%)

Query: 84  EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPF 143
           E     N I   S + H NI+ +    ++    ++  E+   GTL D+I      + +  
Sbjct: 42  ERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKI-----VRQKGQ 96

Query: 144 LMKHRLKVAM--EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------- 193
           L +  + +    +I +AV+Y+H      I+ RDIK     +     + +G FG       
Sbjct: 97  LFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153

Query: 194 -------------FIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                        +++PE       N KSD+++ G +L ELLT K+
Sbjct: 154 EYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 54.7 bits (132), Expect = 4e-09
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 36/159 (22%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
             + H N++K+ G  +  E   +  E+ + GTL + +      ++    +       +++
Sbjct: 54  ELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLE---HGRILDEHVIRVY--TLQL 108

Query: 156 ANAVAYLHVGFSRPIVFRDIKP---------------F----------TTHVNDNDKLIG 190
              +AYLH   S  IV RDIKP               F          TT   +   L G
Sbjct: 109 LEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAG 165

Query: 191 TFGFIAPECITTGNCNEK---SDVYSFGALLLELLTGKK 226
           T  ++APE IT G        +D++S G ++LE+ TGK+
Sbjct: 166 TPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKR 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 25/155 (16%)

Query: 88  CFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           C   I    Q+ H N++K++   +E     +V E    G L+  I      Q      + 
Sbjct: 49  CLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFK-KQKRLIPERT 107

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDND 186
             K  +++ +A+ ++H   S+ I+ RDIKP                     F++      
Sbjct: 108 IWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH 164

Query: 187 KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
            L+GT  +++PE I     N KSD++S G LL E+
Sbjct: 165 SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 54.9 bits (133), Expect = 5e-09
 Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 42/164 (25%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
            N I       H NI+ +    L  +   +V E++  G+L D I     +Q    + + +
Sbjct: 63  INEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDII-----TQNFVRMNEPQ 117

Query: 149 LK-VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------IGTFGF------ 194
           +  V  E+   + YLH   S+ ++ RDIK      +DN  L       +  FGF      
Sbjct: 118 IAYVCREVLQGLEYLH---SQNVIHRDIK------SDNILLSKDGSVKLADFGFAAQLTK 168

Query: 195 --------------IAPECITTGNCNEKSDVYSFGALLLELLTG 224
                         +APE I   +   K D++S G + +E+  G
Sbjct: 169 EKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 54.5 bits (131), Expect = 6e-09
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 35/155 (22%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H NI++++G CL+     +  EFV  G+++  I +  G   EP   K+      +I +
Sbjct: 59  LKHVNIVQYLGTCLDDNTISIFMEFVPGGSIS-SILNRFGPLPEPVFCKY----TKQILD 113

Query: 158 AVAYLHVGFSRPIVFRDIK---------------------------PFTTHVNDNDKLIG 190
            VAYLH   +  +V RDIK                              TH N    + G
Sbjct: 114 GVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHG 170

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE I       KSD++S G  + E+ TGK
Sbjct: 171 TPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 205

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 54.5 bits (131), Expect = 6e-09
 Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 35/161 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           IA   ++ H+NI++++G  L+ +   +  E+V  G++A  ++  N    E  L+++ ++ 
Sbjct: 57  IALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVR- 113

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG----------------- 193
             +I   + YLH   +R I+ RDIK     V++   + I  FG                 
Sbjct: 114 --QILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGA 168

Query: 194 ---------FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                    ++APE +   +   K+D++S G L++E+LTGK
Sbjct: 169 RPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 53.9 bits (130), Expect = 8e-09
 Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 35/162 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHD--PNGSQLEPFLMKHRL 149
           +   SQ +H N++K+    +  +   LV  +++ G+L D +    P G   E  +     
Sbjct: 50  VQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIA---- 105

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------- 193
            V  E+   + YLH   S   + RDIK     + ++  + I  FG               
Sbjct: 106 TVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKV 162

Query: 194 ---------FIAPECITTGN-CNEKSDVYSFGALLLELLTGK 225
                    ++APE +   +  + K+D++SFG   +EL TG 
Sbjct: 163 RKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGA 204

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 45/146 (30%), Positives = 63/146 (43%), Gaps = 34/146 (23%)

Query: 103 ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV--- 159
           I+ F G  L      +  EF+ CG+L DRI+   G    P      +++  +IA AV   
Sbjct: 65  IVSFYGAFLNENNICMCMEFMDCGSL-DRIYKKGG----PI----PVEILGKIAVAVVEG 115

Query: 160 -AYLHVGFSRPIVFRDIKPFTTHVNDN-------------------DKLIGTFGFIAPEC 199
             YL+      I+ RDIKP    VN                     D  +GT  +++PE 
Sbjct: 116 LTYLY--NVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPER 173

Query: 200 ITTGNCNEKSDVYSFGALLLELLTGK 225
           I  G    KSDV+S G  ++EL  GK
Sbjct: 174 IQGGKYTVKSDVWSLGISIIELALGK 199

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 53.4 bits (128), Expect = 1e-08
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 29/152 (19%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH  +++  G C E     LVFEF+  G L+D +    G     F  +  L + +++ 
Sbjct: 55  KLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGK----FSQETLLGMCLDVC 110

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL    S  ++ RD+      V +N  + +  FG                     +
Sbjct: 111 EGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKW 167

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 168 SSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGK 199

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 33/161 (20%)

Query: 93  AFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM--KHRLK 150
              S  +H NI+K +G CL  E   ++ E +  G L   + D    +  P L+  K  L 
Sbjct: 51  HLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLD 110

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------IGTFG----------- 193
           + +++A    YL        + RD+      V++          IG FG           
Sbjct: 111 ICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYY 167

Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                      ++APE +  G    +SDV+SFG L+ E+LT
Sbjct: 168 RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 52.7 bits (126), Expect = 2e-08
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 27/156 (17%)

Query: 88  CFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI-HDPNGSQLEPFLMK 146
           C   I    Q++H N++K++   +E     +V E    G L+  I +     +L P   +
Sbjct: 49  CVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIP--ER 106

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDN 185
              K  +++ +AV ++H   SR ++ RDIKP                     F++     
Sbjct: 107 TVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163

Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
             L+GT  +++PE I     N KSD++S G LL E+
Sbjct: 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 36/155 (23%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H ++++ +G CL +    L+ + +  G L D + +     +    +   L   ++IA 
Sbjct: 66  VDHPHVVRLLGICL-SSQVQLITQLMPLGCLLDYVRNHKD-NIGSQYL---LNWCVQIAK 120

Query: 158 AVAYLHVGFSRPIVFRDI--------KPFTTHVN------------DNDKLIGTFG---- 193
            ++YL     + +V RD+         P   HV             D  +     G    
Sbjct: 121 GMSYLE---EKRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLDVDEKEYHAEGGKVPI 175

Query: 194 -FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
            ++A E I       KSDV+S+G  + EL+T G K
Sbjct: 176 KWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK 210

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 52.3 bits (125), Expect = 3e-08
 Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 27/156 (17%)

Query: 88  CFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI-HDPNGSQLEPFLMK 146
           C   I    Q++H N++K+    +E     +V E    G L+  I H     +L P   K
Sbjct: 49  CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP--EK 106

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDN 185
              K  +++ +A+ ++H   SR ++ RDIKP                     F++     
Sbjct: 107 TVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 163

Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
             L+GT  +++PE I     N KSD++S G LL E+
Sbjct: 164 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 52.1 bits (125), Expect = 3e-08
 Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 27/145 (18%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 159
           HK+++     C   E   ++ E +  G+L   +  P G  L    +   + +A ++A  +
Sbjct: 61  HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLP---VASLIDMACQVAEGM 117

Query: 160 AYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------FIAPE 198
           AYL     +  + RD+      V ++    +  FG                    + APE
Sbjct: 118 AYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPE 174

Query: 199 CITTGNCNEKSDVYSFGALLLELLT 223
             + G  + KSDV+SFG LL E+ T
Sbjct: 175 AASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 52.2 bits (126), Expect = 3e-08
 Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 28/129 (21%)

Query: 118 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 177
           +V E++  G+LAD +    G   EP L      +A +I   + YLH    R I+ RDIKP
Sbjct: 76  IVLEYMDGGSLAD-LLKKVGKIPEPVLAY----IARQILKGLDYLHT--KRHIIHRDIKP 128

Query: 178 ---------------F--TTHVNDNDKL----IGTFGFIAPECITTGNCNEKSDVYSFGA 216
                          F  +  + +        +GT  +++PE I   + +  +D++S G 
Sbjct: 129 SNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGL 188

Query: 217 LLLELLTGK 225
            LLE   GK
Sbjct: 189 TLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 52.4 bits (125), Expect = 4e-08
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 35/163 (21%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPN------GSQLEPFLMKH 147
           + + H++I+KF G C+E +  I+VFE++  G L    R H P+      G++        
Sbjct: 62  TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQ 121

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------- 193
            L +A +IA  + YL    S+  V RD+      V +N  + IG FG             
Sbjct: 122 MLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 178

Query: 194 ---------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                    ++ PE I       +SDV+S G +L E+ T GK+
Sbjct: 179 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 221

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 28/153 (18%)

Query: 93  AFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 152
           A   ++ H N+++ +G C       ++ EF+  G L D + + N  ++   ++   L +A
Sbjct: 54  AVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMA 110

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------------ 193
            +I++A+ YL     +  + RD+      V +N  + +  FG                  
Sbjct: 111 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 167

Query: 194 ---FIAPECITTGNCNEKSDVYSFGALLLELLT 223
              + APE +     + KSDV++FG LL E+ T
Sbjct: 168 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 51.5 bits (123), Expect = 7e-08
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 38/166 (22%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---EPFLMK---- 146
           + + H++I+KF G C + +  I+VFE++  G L    R H P+   L   +P   K    
Sbjct: 62  TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 121

Query: 147 --HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------- 193
               L +A +IA+ + YL    S+  V RD+      V  N  + IG FG          
Sbjct: 122 LSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 178

Query: 194 ------------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                       ++ PE I       +SDV+SFG +L E+ T GK+
Sbjct: 179 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 224

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 50.9 bits (122), Expect = 9e-08
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 27/156 (17%)

Query: 92  IAFASQMSHKNILKFVGCCL---ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           +          I+K+ G  L    + + I + E+   G+L D I+     +      K  
Sbjct: 50  LEINKSCKSPYIVKYYGAFLDESSSSIGIAM-EYCEGGSL-DSIYKKVKKRGGRIGEKVL 107

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN---------------DKLIGTFG 193
            K+A  +   ++YLH   SR I+ RDIKP    +                  + L GTF 
Sbjct: 108 GKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFT 164

Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
               ++APE I     +  SDV+S G  LLE+   +
Sbjct: 165 GTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 50.6 bits (121), Expect = 1e-07
 Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 33/160 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           IA  S + H+NI++++G   E     +  E V  G+L+  +     S+  P     +  +
Sbjct: 56  IALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLR----SKWGPLKDNEQTII 111

Query: 152 --AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------------NDK 187
               +I   + YLH      IV RDIK     VN                        + 
Sbjct: 112 FYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTET 168

Query: 188 LIGTFGFIAPECITTG--NCNEKSDVYSFGALLLELLTGK 225
             GT  ++APE I  G       +D++S G  ++E+ TGK
Sbjct: 169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGK 208

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 50.4 bits (121), Expect = 1e-07
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 25/110 (22%)

Query: 138 SQLEPFLMKHRLKVAM-EIANAVAYLHVGFSRPIVFRDIKP-----------------FT 179
           SQ   F  + ++K  + EI  A+ YLH   S+ I+ RDIKP                   
Sbjct: 92  SQKVKF-SEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIA 147

Query: 180 THVNDNDKLI---GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
           T V  +       GT G++APE +     +   D +S G    E L GK+
Sbjct: 148 TKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKR 197

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 31/155 (20%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDP--NGSQLEPFLMKHRLKV 151
            ++SHKN+++ +G C E E   ++ E+   G L    R         +  P   K ++ +
Sbjct: 63  RKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL 122

Query: 152 AMEIANAVAYLH---------------------VGFSRPIVFRDI--KPFTTHVNDNDKL 188
             +IA  + +L                      V  S   + +D+    +    N     
Sbjct: 123 CTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRN----A 178

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT 223
           +    ++APE +   + + KSDV+SFG L+ E+ T
Sbjct: 179 LIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFT 213

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 50.0 bits (119), Expect = 2e-07
 Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 29/149 (19%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q  H NI+K +G C + +   +V E V  G     +      + +    K  +K A++ A
Sbjct: 48  QYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLR----KKKDELKTKQLVKFALDAA 103

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL    S+  + RD+      V +N+ L I  FG                     +
Sbjct: 104 AGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKW 160

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLT 223
            APE +  G  + +SDV+S+G LL E  +
Sbjct: 161 TAPEALNYGRYSSESDVWSYGILLWETFS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 49.4 bits (119), Expect = 3e-07
 Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 31/130 (23%)

Query: 118 LVFEFVACGTLADRIHDPNGSQLEPFLMKH-RLKVAMEIANAVAYLHVGFSRPIVFRDIK 176
           LV E+   G L   +     S+   F  +  R   A EI  A+ YLH   S  I++RD+K
Sbjct: 70  LVLEYAPGGELFSHL-----SKEGRFSEERARFYAA-EIVLALEYLH---SLGIIYRDLK 120

Query: 177 P---------------------FTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFG 215
           P                      ++  +  +   GT  ++APE +      +  D +S G
Sbjct: 121 PENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLG 180

Query: 216 ALLLELLTGK 225
            LL E+LTGK
Sbjct: 181 VLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 3e-07
 Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 47/159 (29%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------L 149
           +Q+ H  I++ +G C   E  +LV E    G L              +L K R      L
Sbjct: 51  AQLDHPCIVRLIGVCKG-EPLMLVMELAPLGPLLK------------YLKKRREIPVSDL 97

Query: 150 KV-AMEIANAVAYLHVGFSRPIVFRDIKPFTTH-VNDNDKLIGTFG-------------- 193
           K  A ++A  +AYL    S+  V RD+       VN +   I  FG              
Sbjct: 98  KELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154

Query: 194 ---------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                    + APECI  G  + KSDV+S+G  L E  +
Sbjct: 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 34/160 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   ++++H +I++ +G   E     L  E++A G+++  +          F     +  
Sbjct: 54  IRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-----YGAFKEAVIINY 108

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIK----------------------PFTTHVNDND--- 186
             ++   ++YLH      I+ RD+K                                   
Sbjct: 109 TEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQ 165

Query: 187 -KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            +L+GT  F+APE +         DV+S G +++E+ T K
Sbjct: 166 GQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAK 205

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 31/156 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
           S+ +H+NI++ +G   E     ++ E +A G L    R + P   +     MK  L  A 
Sbjct: 64  SKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLIGTFG---------------- 193
           ++A    YL        + RDI       T         I  FG                
Sbjct: 124 DVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGR 180

Query: 194 ------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                 ++ PE    G    K+DV+SFG LL E+ +
Sbjct: 181 AMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 48.6 bits (116), Expect = 5e-07
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 29/155 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           IA  S++ H NI++++G   E +   +  E V  G+LA ++    GS  EP +  +    
Sbjct: 53  IALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLA-KLLKKYGSFPEPVIRLY---- 107

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----------KLIGTFGFI------ 195
             +I   + YLH    R  V RDIK     V+ N           K +  F F       
Sbjct: 108 TRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGS 164

Query: 196 ----APECI-TTGNCNEKSDVYSFGALLLELLTGK 225
               APE I   G     +D++S G  +LE+ TGK
Sbjct: 165 PYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 48.2 bits (115), Expect = 7e-07
 Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 29/152 (19%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH N+++  G C +     +V E++A G L + +      +      +  L +  ++ 
Sbjct: 55  KLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLR----ERKGKLGTEWLLDMCSDVC 110

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDN----------------DKLIGTFG------F 194
            A+ YL    S   + RD+      V ++                D+   + G      +
Sbjct: 111 EAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKW 167

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
             PE       + KSDV+SFG L+ E+ +  K
Sbjct: 168 APPEVFDYSRFSSKSDVWSFGVLMWEVFSEGK 199

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 48.4 bits (115), Expect = 8e-07
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 45/169 (26%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH--------------DPNGSQL-- 140
           Q++H +++K  G C +    +L+ E+   G+L   +               + N S L  
Sbjct: 59  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118

Query: 141 ---EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--- 193
                  M   +  A +I+  + YL       +V RD+      V +  K+ I  FG   
Sbjct: 119 PDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSR 175

Query: 194 -------------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                              ++A E +       +SDV+SFG LL E++T
Sbjct: 176 DVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 224

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 40/167 (23%), Positives = 62/167 (37%), Gaps = 49/167 (29%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 159
           H  I+K      + E    V E+   G L   I    GS  E      R   A EI  A+
Sbjct: 61  HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIR-KYGSLDEKCT---RFYAA-EILLAL 115

Query: 160 AYLHVGFSRPIVFRDIKP---------------FTT--HVNDNDK--------------- 187
            YLH   S+ I+ RD+KP               F T   ++ N                 
Sbjct: 116 EYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQI 172

Query: 188 ---------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                     +GT  +++PE +      + SD+++ G ++ ++LTGK
Sbjct: 173 EKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK 219

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 33/158 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           I     + H+NI+K+ G C E       L+ EF+  G+L + +   N +++    +K +L
Sbjct: 57  IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PRNKNKIN---LKQQL 112

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFGFI------------- 195
           K A++I   + YL    SR  V RD+      V +++   IG FG               
Sbjct: 113 KYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVK 169

Query: 196 ----------APECITTGNCNEKSDVYSFGALLLELLT 223
                     APEC+        SDV+SFG  L ELLT
Sbjct: 170 DDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 35/155 (22%)

Query: 98  MSHKNILKFVGCCLETEVPILVF-EFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           + H NI++++G    TE  + +F E+V  G++   +      + E  L++       ++ 
Sbjct: 65  LDHLNIVQYLGF-ETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRF---FTEQVL 118

Query: 157 NAVAYLHVGFSRPIVFRDIKP---------------F-----TTHVNDNDK---LIGTFG 193
             +AYLH   S+ I+ RD+K                F     +  + DND+   + G+  
Sbjct: 119 EGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVF 175

Query: 194 FIAPECITTGNC--NEKSDVYSFGALLLELLTGKK 226
           ++APE I + +   + K D++S G ++LE+  G++
Sbjct: 176 WMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 20/92 (21%)

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP------FTTHVNDND-----------KLIGTF 192
           +   E+   V  LH    R I+ RDIKP       T H+   D           K +GT 
Sbjct: 101 QYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTP 157

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE I     ++ SD +S G ++ E L G
Sbjct: 158 DYLAPETILGVGDDKMSDWWSLGCVIFEFLFG 189

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 27/152 (17%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
             +SH NI+++    LE +  ++V E+   GTLA+ I     S L+       L   ++I
Sbjct: 54  KLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDE---DTILHFFVQI 110

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--IGTFG-------------------F 194
             A+ ++H   ++ I+ RD+K     ++ +  +  IG FG                   +
Sbjct: 111 LLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCY 167

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
           I+PE       N+KSD+++ G +L EL + K+
Sbjct: 168 ISPELCEGKPYNQKSDIWALGCVLYELASLKR 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 28/146 (19%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 159
           H  +++    C   E   +V E +  G+L + +    G  L+   +   + +A ++A+ +
Sbjct: 60  HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALK---LPQLIDMAAQVASGM 116

Query: 160 AYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------FIAP 197
           AYL    ++  + RD+      V +N+   +  FG                     + AP
Sbjct: 117 AYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAP 173

Query: 198 ECITTGNCNEKSDVYSFGALLLELLT 223
           E       + KSDV+SFG LL E++T
Sbjct: 174 EAALYNRFSIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 25/145 (17%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L    +   LK +++
Sbjct: 54  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 110

Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-----------------FIA 196
           +  A+ YL    +   V RD+      V+ DN   +  FG                 + A
Sbjct: 111 VCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 167

Query: 197 PECITTGNCNEKSDVYSFGALLLEL 221
           PE +     + KSDV+SFG LL E+
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 37/158 (23%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     +V E+ A G L D  R   P G            E    K  
Sbjct: 75  HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDL 134

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +  A ++A  + +L    S+  + RD+      V ++  + I  FG              
Sbjct: 135 VSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKT 191

Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 192 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)

Query: 99  SHKNILKFVGCCL-ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           +   I+ F G      ++ I + E++  G+L   + +  G   E  L K    +A+ +  
Sbjct: 57  NSPYIVGFYGAFYNNGDISICM-EYMDGGSLDKILKEVQGRIPERILGK----IAVAVLK 111

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVND--NDKL-----------------IGTFGFIAPE 198
            + YLH      I+ RD+KP    VN     KL                 +GT  ++APE
Sbjct: 112 GLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPE 169

Query: 199 CITTGNCNEKSDVYSFGALLLELLTGK 225
            I   + + KSD++S G  L+EL TG+
Sbjct: 170 RIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 43/163 (26%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI--HDPN------------GSQLE 141
           S + H NI+  +G C + +   ++FE++A G L + +  + P+             S L+
Sbjct: 63  SDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLD 122

Query: 142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------- 193
                H   +A++IA  + YL    S   V RD+      V +   + I  FG       
Sbjct: 123 CSDFLH---IAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYS 176

Query: 194 ---------------FIAPECITTGNCNEKSDVYSFGALLLEL 221
                          ++ PE I  G    +SD++SFG +L E+
Sbjct: 177 ADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 46.5 bits (110), Expect = 3e-06
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 30/147 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q SH NI++ +G C + +   +V E V  G     +    G +L+   +K  +++    A
Sbjct: 49  QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT-EGPRLK---VKELIQMVENAA 104

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------- 193
             + YL    S+  + RD+      V + + L I  FG                      
Sbjct: 105 AGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVK 161

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLE 220
           + APE +  G  + +SDV+SFG LL E
Sbjct: 162 WTAPEALNYGRYSSESDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 46.3 bits (110), Expect = 3e-06
 Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 40/163 (24%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPF 143
           FN +       H NI++     L  +   +V EF+  G L D     R+++    Q+   
Sbjct: 64  FNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE---QIA-- 118

Query: 144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDN- 185
                  V + +  A+++LH   ++ ++ RDIK                  F   V+   
Sbjct: 119 ------TVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169

Query: 186 ---DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 36/159 (22%)

Query: 92  IAFASQMSH---KNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           +A  SQ+      NI K+ G  L+   + I + E+   G++          +  P   K+
Sbjct: 50  VALLSQLRQSQPPNITKYYGSYLKGPRLWI-IMEYAEGGSVRTL------MKAGPIAEKY 102

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDND 186
              +  E+  A+ Y+H      ++ RDIK                         + +   
Sbjct: 103 ISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRS 159

Query: 187 KLIGTFGFIAPECITTGNC-NEKSDVYSFGALLLELLTG 224
             +GT  ++APE IT G   + K+D++S G  + E+ TG
Sbjct: 160 TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 31/151 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q+ H+NI+             LVFE+V    L      P G  L P  ++       ++ 
Sbjct: 56  QLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGG--LPPDAVR---SYIWQLL 110

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI-------------------- 195
            A+AY H   S  I+ RDIKP    V+++  L +  FGF                     
Sbjct: 111 QAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWY 167

Query: 196 -APEC-ITTGNCNEKSDVYSFGALLLELLTG 224
            APE  +   N  +  DV++ G ++ ELL G
Sbjct: 168 RAPELLVGDTNYGKPVDVWAIGCIMAELLDG 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 31/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H  +++       T+ PI ++ E++  G+L D +  P G +L    +   + +A +I
Sbjct: 57  QLQHPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLT---INKLIDMAAQI 111

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------- 193
           A  +A++     +  + RD++     V++     I  FG                     
Sbjct: 112 AEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIK 168

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 169 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 198

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 45.7 bits (108), Expect = 6e-06
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 26/155 (16%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           F   +   Q+SHK+I+   G C+     I+V EFV  G L   +H     + +      +
Sbjct: 52  FETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMH----RKSDVLTTPWK 107

Query: 149 LKVAMEIANAVAYL-------------HVGFSRPIVFRDIKPFTT--------HVNDNDK 187
            KVA ++A+A++YL             ++  +R  +  +  PF           V    +
Sbjct: 108 FKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQE 167

Query: 188 LIGTFGFIAPECIT-TGNCNEKSDVYSFGALLLEL 221
            +    +IAPEC+  + N +  +D +SFG  L E+
Sbjct: 168 CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 8e-06
 Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 32/158 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I     + H+ I+++ GC  + E   +  E++  G++ D++    G+  E    K+    
Sbjct: 55  IQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLK-AYGALTETVTRKY---- 109

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP--FTTHVNDNDKL--------------------- 188
             +I   V YLH   S  IV RDIK          N KL                     
Sbjct: 110 TRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKS 166

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             GT  +++PE I+      K+DV+S G  ++E+LT K
Sbjct: 167 VTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEK 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 44.9 bits (106), Expect = 1e-05
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 25/149 (16%)

Query: 93  AFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 152
           A  +++ HKN+++ +G  L   + I V E ++ G L + +    G  L    +   L+ +
Sbjct: 51  AVMTKLHHKNLVRLLGVILHNGLYI-VMELMSKGNLVNFLRT-RGRALVS--VIQLLQFS 106

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-----------------F 194
           +++A  + YL    S+ +V RD+      V+ D    +  FG                 +
Sbjct: 107 LDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKW 163

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLT 223
            APE +     + KSDV+S+G LL E+ +
Sbjct: 164 TAPEALKHKKFSSKSDVWSYGVLLWEVFS 192

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 44.8 bits (107), Expect = 1e-05
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 21/91 (23%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK-LIGTFG 193
           A ++  A+ YLH   S  IV+RD+KP                 F   V      L GT  
Sbjct: 107 AAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPE 163

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           ++APE I +    +  D ++ G L+ E+L G
Sbjct: 164 YLAPEIILSKGYGKAVDWWALGILIYEMLAG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 28/148 (18%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H  +++      + E   ++ E++A G+L D +    G ++   L+   +  + +IA 
Sbjct: 58  LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKV---LLPKLIDFSAQIAE 114

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------FI 195
            +AY+     +  + RD++     V+++    I  FG                     + 
Sbjct: 115 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 171

Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APE I  G+   KSDV+SFG LL E++T
Sbjct: 172 APEAINFGSFTIKSDVWSFGILLYEIVT 199

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 43/140 (30%)

Query: 114 EVPILVFEFVACGTL-ADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVF 172
           E+ +L+ EF+  G+L    I D      E FL      VA +I + +AYLH    R IV 
Sbjct: 146 EIQVLL-EFMDGGSLEGTHIAD------EQFLAD----VARQILSGIAYLH---RRHIVH 191

Query: 173 RDIKPFTTHVND--NDKL-------------------IGTFGFIAPECITTGNCNE---- 207
           RDIKP    +N   N K+                   +GT  +++PE I T + N     
Sbjct: 192 RDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINT-DLNHGAYD 250

Query: 208 --KSDVYSFGALLLELLTGK 225
               D++S G  +LE   G+
Sbjct: 251 GYAGDIWSLGVSILEFYLGR 270

Length = 353

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 27/148 (18%)

Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA--MEI 155
           SH N+L  +G CL +E  P++V  ++  G L + I     +     L+   L+VA  ME 
Sbjct: 54  SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEY 113

Query: 156 ANAVAYLH--------------------VGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFI 195
             +  ++H                     G +R I   D + ++ H +   KL     ++
Sbjct: 114 LASKKFVHRDLAARNCMLDESFTVKVADFGLARDIY--DKEYYSVHNHTGAKL--PVKWM 169

Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           A E + T     KSDV+SFG LL EL+T
Sbjct: 170 ALESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 21/92 (22%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDND-KLIGTFG 193
           A EI  A+ YLH   S+ IV+RD+KP                 F   + D    L GT  
Sbjct: 107 ASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPE 163

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           ++APE I +   N+  D ++ G L+ E+L G 
Sbjct: 164 YLAPEVIQSKGHNKAVDWWALGILIYEMLVGY 195

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 32/153 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++SH+ +++  G C   + PI +V E+++ G L + +        + F     L++  ++
Sbjct: 55  KLSHEKLVQLYGVC-TKQRPIYIVTEYMSNGCLLNYLR----EHGKRFQPSQLLEMCKDV 109

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDN----------------DKLIGTFG------ 193
              +AYL    S+  + RD+      V+D                 D+   + G      
Sbjct: 110 CEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVR 166

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT-GK 225
           +  PE +     + KSDV++FG L+ E+ + GK
Sbjct: 167 WSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGK 199

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 43.7 bits (103), Expect = 3e-05
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 43/171 (25%)

Query: 93  AFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE----------- 141
           A  ++  H NI+K +G C   +   L+FE++A G L + +   +                
Sbjct: 60  ALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARK 119

Query: 142 ------PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG- 193
                 P     +L +A ++A  +AYL     R  V RD+      V +N  + I  FG 
Sbjct: 120 CGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGL 176

Query: 194 ---------------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                                ++ PE I       +SDV+++G +L E+ +
Sbjct: 177 SRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 43.6 bits (103), Expect = 3e-05
 Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 23/147 (15%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q+ H NI+++    LE +   +V + +    L +  +     + + F  +    + +++ 
Sbjct: 65  QLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLK-EKKQRFTEERIWNIFVQMV 123

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIA 196
            A+ YLH    + IV RD+ P    + ++DK+                    +GT  +  
Sbjct: 124 LALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSC 181

Query: 197 PECITTGNCNEKSDVYSFGALLLELLT 223
           PE +      EK+DV++FG +L ++ T
Sbjct: 182 PEIVKNEPYGEKADVWAFGCILYQMCT 208

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 23/91 (25%)

Query: 155 IANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK---LIGTFGF 194
           +  A  YLH   +R I++RD+KP                 F   +    K     GT  +
Sbjct: 102 VVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEY 158

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           +APE I     +   D +S G LL ELLTG+
Sbjct: 159 VAPEIILNKGYDFSVDYWSLGILLYELLTGR 189

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 42/167 (25%)

Query: 92  IAFASQMSHKNILKFV--GCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
            A  +++ H NI+  +  G      +   VFE+V   TL + +       L         
Sbjct: 29  TALCARLYHPNIVALLDSGEA-PPGLLFAVFEYVPGRTLREVLA--ADGALPAGETGR-- 83

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP-----FTTHVNDNDKL----IGTFG------- 193
            + +++ +A+A  H   ++ IV RD+KP       T V  + K+    IGT         
Sbjct: 84  -LMLQVLDALACAH---NQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLLPGVRDAD 139

Query: 194 ---------------FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                          + APE +        SD+Y++G + LE LTG+
Sbjct: 140 VATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQ 186

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 37/158 (23%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P     E    K  
Sbjct: 83  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDL 142

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 143 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 199

Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 200 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 32/100 (32%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------------------FTTHVND 184
           EI  A+ YLH   S  I+ RD+KP                                   +
Sbjct: 101 EIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157

Query: 185 NDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           + +++GT  +IAPE I     ++  D +S G +L E L G
Sbjct: 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVG 197

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 43.4 bits (102), Expect = 4e-05
 Identities = 39/158 (24%), Positives = 63/158 (39%), Gaps = 37/158 (23%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ A G L +  R   P G            E    K  
Sbjct: 77  HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDL 136

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +  A ++A  + YL    SR  + RD+      V +++ + I  FG              
Sbjct: 137 VSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKT 193

Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 194 SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 43.1 bits (101), Expect = 5e-05
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 80  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDL 139

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 140 VSCTYQVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKT 196

Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 197 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 42/168 (25%), Positives = 61/168 (36%), Gaps = 54/168 (32%)

Query: 99  SHKNILKFVGCCLETEVPI------LVFEFVACGT---LADRIHDPNGSQLEP---FLMK 146
           +H NI  F G  ++   P       LV E    G+   L   +        E    ++++
Sbjct: 61  NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILR 120

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KL---------------- 188
                  E    +AYLH      ++ RDIK     +  N   KL                
Sbjct: 121 -------ETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRR 170

Query: 189 ---IGTFGFIAPECITTGNCNE--------KSDVYSFGALLLELLTGK 225
              IGT  ++APE I    C+E        +SDV+S G   +EL  GK
Sbjct: 171 NTFIGTPYWMAPEVIA---CDEQPDASYDARSDVWSLGITAIELADGK 215

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 42.7 bits (100), Expect = 6e-05
 Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 29/134 (21%)

Query: 113 TEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIV 171
           +E PI +V EF+  G+L D + + +G  L+   +   + +A +IA+ +AY+        +
Sbjct: 71  SEEPIYIVTEFMGKGSLLDFLKEGDGKYLK---LPQLVDMAAQIADGMAYIE---RMNYI 124

Query: 172 FRDIKPFTTHVNDNDKL-IGTFG---------------------FIAPECITTGNCNEKS 209
            RD++     V DN    I  FG                     + APE    G    KS
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 210 DVYSFGALLLELLT 223
           DV+SFG LL EL+T
Sbjct: 185 DVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.6 bits (100), Expect = 7e-05
 Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 30/157 (19%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N I    +  H NI+ ++   L  +   +V E++A G+L D + +   + ++   +    
Sbjct: 65  NEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIA--- 118

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDNDKL 188
            V  E   A+ +LH   S  ++ RDIK                       T   +    +
Sbjct: 119 AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 175

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           +GT  ++APE +T      K D++S G + +E++ G+
Sbjct: 176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 42.1 bits (99), Expect = 8e-05
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 27/155 (17%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +A  S M H NI+++     E     +V ++   G L  +I+   G     F     L  
Sbjct: 50  VAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGV---LFPEDQILDW 106

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---FTTH--------------VNDNDKL----IG 190
            ++I  A+ ++H    R I+ RDIK    F T               +N   +L    IG
Sbjct: 107 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIG 163

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  +++PE       N KSD+++ G +L E+ T K
Sbjct: 164 TPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)

Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 27  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 86

Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N     P  +K  +++A EIA+ +AYL+   +   V R
Sbjct: 87  IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHR 143

Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 144 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 203

Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 204 VWSFGVVLWEIAT 216

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 29/134 (21%)

Query: 113 TEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIV 171
           +E PI +V E+++ G+L D + D  G  L+   + + + +A ++A  +AY+        +
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKDGEGRALK---LPNLVDMAAQVAAGMAYIE---RMNYI 124

Query: 172 FRDIKPFTTHVNDNDKL-IGTFG---------------------FIAPECITTGNCNEKS 209
            RD++     V D     I  FG                     + APE    G    KS
Sbjct: 125 HRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 210 DVYSFGALLLELLT 223
           DV+SFG LL EL+T
Sbjct: 185 DVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 38/164 (23%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDP-------NGSQLEP 142
           +   S++S  NI + +G C       ++ E++  G L    + H         N   L  
Sbjct: 70  VKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSF 129

Query: 143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------- 193
             + +   +A +IA+ + YL    S   V RD+      V  N  + I  FG        
Sbjct: 130 STLLY---MATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSS 183

Query: 194 --------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                         ++A E +  G    KSDV++FG  L E+LT
Sbjct: 184 DYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 30/139 (21%)

Query: 109 CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS 167
            C +T   +  V E+V  G L   I      Q+  F   H +  A EIA  + +LH   S
Sbjct: 68  SCFQTMDRLYFVMEYVNGGDLMYHIQ-----QVGKFKEPHAVFYAAEIAIGLFFLH---S 119

Query: 168 RPIVFRDIK---------------PF---TTHVNDNDK---LIGTFGFIAPECITTGNCN 206
           + I++RD+K                F     ++          GT  +IAPE I      
Sbjct: 120 KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYG 179

Query: 207 EKSDVYSFGALLLELLTGK 225
           +  D ++FG LL E+L G+
Sbjct: 180 KSVDWWAFGVLLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 28/152 (18%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++M H NI+ F     E     +V E+   G L  RI+   G           L   ++I
Sbjct: 54  AKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSE---DQILSWFVQI 110

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--IGTFG-------------------- 193
           +  + ++H    R I+ RDIK     ++ N  +  +G FG                    
Sbjct: 111 SLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPY 167

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           +++PE       N K+D++S G +L EL T K
Sbjct: 168 YLSPEICQNRPYNNKTDIWSLGCVLYELCTLK 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 40/164 (24%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH--------------DPNGSQLE 141
           S++   NI++ +G C++ +   ++ E++  G L   +                P    L 
Sbjct: 74  SRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLP 133

Query: 142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------- 193
                  L VA++IA+ + YL    S   V RD+      V +N  + I  FG       
Sbjct: 134 AISYSSLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYA 190

Query: 194 ---------------FIAPECITTGNCNEKSDVYSFGALLLELL 222
                          ++A ECI  G     SDV++FG  L E+L
Sbjct: 191 GDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 32/156 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    Q+ H+N++  +      +   LVFEFV    L D    PNG  L+   ++   K 
Sbjct: 51  IRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNG--LDESRVR---KY 105

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KLIGTFGFI-------------- 195
             +I   + + H   S  I+ RDIKP    V+ +   KL   FGF               
Sbjct: 106 LFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLC-DFGFARTLAAPGEVYTDYV 161

Query: 196 ------APECITTGNCNEKS-DVYSFGALLLELLTG 224
                 APE +       ++ D+++ G L+ E+LTG
Sbjct: 162 ATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTG 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 38/161 (23%)

Query: 89  FNCIAFASQMSHKNILKFV-GCCLETEVPILVFEFVACGTL-----ADRIHDPNGSQLEP 142
           F   +  SQ+SH + L FV G C+     I+V EFV  G L      ++   P       
Sbjct: 64  FETASLMSQVSHIH-LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVP------- 115

Query: 143 FLMKHRLKVAMEIANAVAYL-------------HVGFSRPIVFRDIKPF--------TTH 181
             +  ++ VA ++A+A++YL             ++  +R  +     PF        +  
Sbjct: 116 --VAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFT 173

Query: 182 VNDNDKLIGTFGFIAPECITTGN-CNEKSDVYSFGALLLEL 221
               ++ +    +IAPEC+  GN  +  +D +SFG  LLE+
Sbjct: 174 ALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 38/159 (23%), Positives = 58/159 (36%), Gaps = 39/159 (24%)

Query: 98  MSHKNILKFVG---------CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           M+ K +L   G          C +T+  +  V E+V  G L   I      +   F    
Sbjct: 43  MTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQ-----RSGRFDEPR 97

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIK------PFTTHVNDND--------------- 186
               A EI   + +LH    R I++RD+K          H+   D               
Sbjct: 98  ARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154

Query: 187 KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
              GT  +IAPE ++        D ++ G LL E+L G+
Sbjct: 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQ 193

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 30/149 (20%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHD--PNGSQL-EPFLMKHRLKVA 152
           S++ H  I+KF    LE +   ++ E+     L  ++ +    G  L E  + +  +++ 
Sbjct: 57  SKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLL 116

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFG------------------- 193
           +     V Y+H    R I+ RD+K     + +N   IG FG                   
Sbjct: 117 L----GVHYMHQ---RRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTP 169

Query: 194 -FIAPECITTGNCNEKSDVYSFGALLLEL 221
            +++PE +     + KSD++S G +L E+
Sbjct: 170 YYMSPEALKHQGYDSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 37/154 (24%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH---DPNGSQLEPFLMKHRLKVA 152
           + M H ++++ +G CL   +  LV + +  G L D +H   D  GSQL        L   
Sbjct: 64  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQL-------LLNWC 115

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKLIGTFG------------------ 193
           ++IA  + YL     R +V RD+      V   N   I  FG                  
Sbjct: 116 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 172

Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               ++A ECI       +SDV+S+G  + EL+T
Sbjct: 173 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 27/159 (16%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           F   +  SQ+SHK+++   G C+  +  I+V E+V  G+L D     N + +     K  
Sbjct: 47  FEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSL-DTYLKKNKNLI-NISWK-- 102

Query: 149 LKVAMEIANAVAYL--------HVGFSRPIVFR--DIK----PF--------TTHVNDND 186
           L+VA ++A A+ +L        +V     ++ R  D K    PF        +  V   +
Sbjct: 103 LEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE 162

Query: 187 KLIGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTG 224
            L+    ++ PECI    N +  +D +SFG  L E+ +G
Sbjct: 163 ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSG 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 37/158 (23%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G            E    K  
Sbjct: 77  HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDL 136

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V +++ + I  FG              
Sbjct: 137 VSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKT 193

Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 194 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 32/152 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRL 149
           + F  Q+ H N +++ GC L+     LV E+   G+ +D   +H     ++E   + H  
Sbjct: 72  VKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAITH-- 128

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVND---------NDKLIGTF 192
                    +AYLH   S  ++ RDIK        P    + D          +  +GT 
Sbjct: 129 ----GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTP 181

Query: 193 GFIAPECITT---GNCNEKSDVYSFGALLLEL 221
            ++APE I     G  + K DV+S G   +EL
Sbjct: 182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 45/166 (27%), Positives = 65/166 (39%), Gaps = 49/166 (29%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           I     + H NI+K+ G C         LV E++  G+L D            +L KHR 
Sbjct: 56  IEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRD------------YLQKHRE 103

Query: 150 KV--------AMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
           ++        A +I   + YL    S+  V RD+      V ++N   IG FG       
Sbjct: 104 RLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160

Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 31/150 (20%)

Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 70  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 129

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V RD+      V +D    IG FG                      
Sbjct: 130 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 186

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 187 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 40.0 bits (93), Expect = 4e-04
 Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 32/159 (20%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H+N+++     L  E   ++ EF+  G L D +     SQ    L + +
Sbjct: 66  FNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIV-----SQTR--LNEEQ 118

Query: 149 LKVAME-IANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDND 186
           +    E +  A+ YLH   S+ ++ RDIK                       +  V    
Sbjct: 119 IATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175

Query: 187 KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 44/160 (27%)

Query: 98  MSHKNILKFVGCCLE-TEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRL-K 150
           +SH+NIL  +  C+E  E P +++ ++  G L       R+ + N  Q    L   +L  
Sbjct: 65  LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQA---LSTQQLVH 121

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIK------------------------PFTTHV---N 183
           +A++IA  ++YLH    R ++ +DI                         P   H    N
Sbjct: 122 MAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDN 178

Query: 184 DNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT 223
           +N  +     ++A E +     +  SDV+SFG LL EL+T
Sbjct: 179 ENRPV----KWMALESLVNKEYSSASDVWSFGVLLWELMT 214

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 30/155 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I F SQ     I K+ G  L+     ++ E+   G+  D +      +       +   +
Sbjct: 50  IQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL------KPGKLDETYIAFI 103

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------F--TTHVNDN----DKLIG 190
             E+   + YLH       + RDIK                F  +  +       +  +G
Sbjct: 104 LREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVG 160

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE I     +EK+D++S G   +EL  G+
Sbjct: 161 TPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 30/156 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I+   ++ H NI+K +          LVFE+     L   +       L P L+K  +  
Sbjct: 49  ISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDK-RPGPLSPNLIKSIMY- 105

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-----IAPECITTG-- 203
             ++   +AY H   S  I+ RD+KP    +N +  L +  FG      I     T    
Sbjct: 106 --QLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVV 160

Query: 204 -----------NCNEKS---DVYSFGALLLELLTGK 225
                           S   D++S G +  E++TGK
Sbjct: 161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGK 196

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 23/155 (14%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N I   + ++H NI+ +    L+     +V E+   G L+  I      + +    +   
Sbjct: 48  NEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISK-RKKKRKLIPEQEIW 106

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IG 190
           ++ +++   +  LH    + I+ RD+K     +  ND +                   IG
Sbjct: 107 RIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIG 163

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE       + KSD++S G LL E+ T  
Sbjct: 164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFA 198

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 46/164 (28%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I+   Q     I+K+ G   +     +V E+   G+++D             +MK   K 
Sbjct: 49  ISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSD-------------IMKITNKT 95

Query: 152 AME--IA-------NAVAYLHVGFSRPIVFRDIKPFTTHVND--NDKL------------ 188
             E  IA         + YLH   S   + RDIK     +N+    KL            
Sbjct: 96  LTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152

Query: 189 -------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                  IGT  ++APE I     N K+D++S G   +E+  GK
Sbjct: 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 34/160 (21%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDP--NGSQLEPFLMK 146
           FN +       H+N++      L  +   +V EF+  G L D +     N  Q+      
Sbjct: 67  FNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----- 121

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDN 185
               V + +  A++YLH   ++ ++ RDIK                       +  V   
Sbjct: 122 ---TVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR 175

Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 39.5 bits (92), Expect = 8e-04
 Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 53/166 (31%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTL-----ADRIHDPNGSQLEPFLMKHRLKVA 152
           ++H N+L+ +G C+E+   +LV EF   G L     ++R      +Q    ++    ++A
Sbjct: 52  LNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQ--KDVL---QRMA 106

Query: 153 MEIANAVAYLH----------------------------VGFSRPIVFRDIKPFTTHVND 184
            E+A+ + +LH                            +   +   + +      +   
Sbjct: 107 CEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQ---YPE-----DYYIT 158

Query: 185 NDKLIGTFGFIAPECIT-------TGNCNEKSDVYSFGALLLELLT 223
            D       ++APE +          +  +KS+++S G  + EL T
Sbjct: 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 39.3 bits (91), Expect = 8e-04
 Identities = 35/159 (22%), Positives = 68/159 (42%), Gaps = 34/159 (21%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDP--NGSQLEPFLMKH 147
           N I    ++ + NI+ F+   L  +   +V E++A G+L D + +   + +Q+       
Sbjct: 65  NEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIA------ 118

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDND 186
              V  E   A+ +LH   +  ++ RDIK                       T   +   
Sbjct: 119 --AVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRS 173

Query: 187 KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            ++GT  ++APE +T      K D++S G + +E++ G+
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 39.3 bits (91), Expect = 8e-04
 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 37/171 (21%)

Query: 83  TEEYYCFNC-IAFASQMSHKNILKFVGCCLE-TEVPILVF-EFVACGTLADRIHDPNGSQ 139
           ++E     C I     + H+ I+++ GC  +  E  + +F E++  G++ D++    G+ 
Sbjct: 45  SKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQL-KAYGAL 103

Query: 140 LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND--NDKLIGTFG---- 193
            E    K+      +I   ++YLH   S  IV RDIK      +   N KL G FG    
Sbjct: 104 TESVTRKY----TRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKL-GDFGASKR 155

Query: 194 -------------------FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                              +++PE I+      K+DV+S G  ++E+LT K
Sbjct: 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 39.2 bits (91), Expect = 9e-04
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 34/160 (21%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDP--NGSQLEPFLMK 146
           FN +       H+N+++     L  +   +V EF+  G L D +     N  Q+      
Sbjct: 65  FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA----- 119

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTH------------------VNDN 185
               V + +  A++ LH   ++ ++ RDIK      TH                  V   
Sbjct: 120 ---AVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR 173

Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 21/89 (23%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDND-KLIGTFGFI 195
           E+  A  YLH   S+ I++RD+KP                 F   V D    L GT  ++
Sbjct: 126 ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYL 182

Query: 196 APECITTGNCNEKSDVYSFGALLLELLTG 224
           APE I +    +  D ++ G LL E + G
Sbjct: 183 APEVIQSKGHGKAVDWWTMGVLLYEFIAG 211

Length = 329

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 29/134 (21%)

Query: 113 TEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIV 171
           +E PI +V E+++ G+L D +    G  L    +   + +A +IA+ +AY+        V
Sbjct: 71  SEEPIYIVTEYMSKGSLLDFLKGEMGKYLR---LPQLVDMAAQIASGMAYVE---RMNYV 124

Query: 172 FRDIKPFTTHVNDNDKL-IGTFG---------------------FIAPECITTGNCNEKS 209
            RD++     V +N    +  FG                     + APE    G    KS
Sbjct: 125 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 184

Query: 210 DVYSFGALLLELLT 223
           DV+SFG LL EL T
Sbjct: 185 DVWSFGILLTELTT 198

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 24/92 (26%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTT------HVN-----------DNDK----LIGTF 192
           E+A A+ +LH   S  I++RD+KP         H+            D++K      GT 
Sbjct: 106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 162

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +      + +D +SFG L+ E+LTG
Sbjct: 163 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 48/162 (29%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAMEI 155
           + H NIL+ +G C+E    +LVFE+   G L   +     +    +  L++   ++A EI
Sbjct: 52  LQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ---RMACEI 108

Query: 156 ANAVAYLH----------------------------VGFSRPIVFRDIKPFTTHVNDNDK 187
           A  V ++H                            +G SR   +++      ++   D 
Sbjct: 109 AAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSR---YKE-----DYIETEDD 160

Query: 188 LIGTFGFIAPECIT-------TGNCNEKSDVYSFGALLLELL 222
                 ++APE +        T    + S+V++ G  L EL 
Sbjct: 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELF 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 32/152 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRL 149
           + F  ++ H N +++ GC L      LV E+   G+ +D   +H     ++E   + H  
Sbjct: 76  VKFLQRIKHPNSIEYKGCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAITHG- 133

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVND---------NDKLIGTF 192
             A++    +AYLH   S  ++ RDIK        P    + D          +  +GT 
Sbjct: 134 --ALQ---GLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTP 185

Query: 193 GFIAPECITT---GNCNEKSDVYSFGALLLEL 221
            ++APE I     G  + K DV+S G   +EL
Sbjct: 186 YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 32/152 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRL 149
           + F  ++ H N +++ GC L      LV E+   G+ +D   +H     ++E   + H  
Sbjct: 66  VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHG- 123

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVND---------NDKLIGTF 192
             A++    +AYLH   S  ++ RD+K        P    + D          +  +GT 
Sbjct: 124 --ALQ---GLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTP 175

Query: 193 GFIAPECITT---GNCNEKSDVYSFGALLLEL 221
            ++APE I     G  + K DV+S G   +EL
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 51/163 (31%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHR------- 148
           Q  H +I+K +G    TE P+ +V E    G            +L  +L  ++       
Sbjct: 63  QFDHPHIVKLIGVI--TENPVWIVMELAPLG------------ELRSYLQVNKYSLDLAS 108

Query: 149 -LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KLIGTFG------------ 193
            +  + +++ A+AYL    S+  V RDI      V+  D  KL G FG            
Sbjct: 109 LILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKL-GDFGLSRYLEDESYYK 164

Query: 194 ---------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                    ++APE I        SDV+ FG  + E+L  G K
Sbjct: 165 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVK 207

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 44/158 (27%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVAC-GTLADRIHDPNGSQLEPFLMKHRLK 150
           + F  Q+ H N +++ GC L      LV E+  C G+ +D +           + K  L+
Sbjct: 66  VRFLQQLRHPNTIEYKGCYLREHTAWLVMEY--CLGSASDILE----------VHKKPLQ 113

Query: 151 VAMEIA-------NAVAYLHVGFSRPIVFRDIKP----FTTH-------------VNDND 186
             +EIA         +AYLH   S   + RDIK      T               V+  +
Sbjct: 114 -EVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169

Query: 187 KLIGTFGFIAPECITT---GNCNEKSDVYSFGALLLEL 221
             +GT  ++APE I     G  + K DV+S G   +EL
Sbjct: 170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 32/154 (20%)

Query: 96  SQMSHKNILKFVGCCLETEVPIL--VFEFVACGTLADRIHDPNGSQL-EPFLMKHRLKVA 152
           SQ+ H NI+ +     E E  +L  V  F   G L  ++ +  G  L E  +++  +++A
Sbjct: 54  SQLKHPNIVAYRES-WEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIA 112

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP---FTTHVN---------------DND---KLIGT 191
           M    A+ YLH    + I+ RD+K    F T  N                 D    LIGT
Sbjct: 113 M----ALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGT 165

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             +++PE  +    N KSDV++ G  + E+ T K
Sbjct: 166 PYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 42/140 (30%)

Query: 122 FVACGTLADRIHDP----------NGSQLEPFLMKHRLK-------VAMEIANAVAYLHV 164
           F+ C T A   H P          NG  L   L +H +         A EI   + ++H 
Sbjct: 58  FIVCMTYA--FHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMH- 114

Query: 165 GFSRPIVFRDIKPFTT------HVNDND-------------KLIGTFGFIAPECITTGNC 205
             +R +V+RD+KP         HV  +D               +GT G++APE +  G  
Sbjct: 115 --NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTA 172

Query: 206 NEKS-DVYSFGALLLELLTG 224
            + S D +S G +L +LL G
Sbjct: 173 YDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 29/134 (21%)

Query: 113 TEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIV 171
           T+ PI ++ EF+A G+L D +    GS+     +   +  + +IA  +A++     R  +
Sbjct: 71  TKEPIYIITEFMAKGSLLDFLKSDEGSKQP---LPKLIDFSAQIAEGMAFIE---QRNYI 124

Query: 172 FRDIKPFTTHVN----------------DNDKLIGTFG------FIAPECITTGNCNEKS 209
            RD++     V+                ++++     G      + APE I  G+   KS
Sbjct: 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 184

Query: 210 DVYSFGALLLELLT 223
           DV+SFG LL+E++T
Sbjct: 185 DVWSFGILLMEIVT 198

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 23/93 (24%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTT------HVNDND-------------KLIGTF 192
           A EI   + ++H  F   +V+RD+KP         HV  +D               +GT 
Sbjct: 103 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 159

Query: 193 GFIAPECITTGNCNEKS-DVYSFGALLLELLTG 224
           G++APE +  G   + S D +S G +L +LL G
Sbjct: 160 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 192

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 30/119 (25%)

Query: 131 RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-I 189
           +++D   +  E  L K    +A+ I  A+ YLH   S  ++ RD+KP    +N N ++ +
Sbjct: 92  KVYDKGLTIPEDILGK----IAVSIVKALEYLHSKLS--VIHRDVKPSNVLINRNGQVKL 145

Query: 190 GTFG-------------------FIAPECIT-TGNC---NEKSDVYSFGALLLELLTGK 225
             FG                   ++APE I    N    + KSDV+S G  ++EL TG+
Sbjct: 146 CDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 41/161 (25%)

Query: 97  QMSHKNILKFVGCCLETE------VPILVFEFVACGTL-----ADRIHDPNGSQLEPFLM 145
              H N++K +G C E         P+++  F+  G L       R+    G   E   +
Sbjct: 57  DFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRL----GGLPEKLPL 112

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG----------- 193
           +  LK  ++IA  + YL    +R  + RD+      + ++  + +  FG           
Sbjct: 113 QTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY 169

Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                      +IA E +       KSDV++FG  + E+ T
Sbjct: 170 RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 24/94 (25%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI---------------------G 190
           A EIA+A+ YLH   S  I++RD+KP    ++    ++                     G
Sbjct: 102 AAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           T  ++APE +     +   D +  GA+L E+L G
Sbjct: 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYG 192

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 37.5 bits (88), Expect = 0.003
 Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 51/163 (31%)

Query: 97  QMSHKNILKFVGCCLETEVP--ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM- 153
           ++ H NI++              +VFE++         HD  G      L    +K    
Sbjct: 54  KLRHPNIVRLKEIVTSKGKGSIYMVFEYMD--------HDLTG-----LLDSPEVKFTES 100

Query: 154 -------EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------ 193
                  ++   + YLH   S  I+ RDIK     +N++  L +  FG            
Sbjct: 101 QIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157

Query: 194 ---------FIAPECITTG--NCNEKSDVYSFGALLLELLTGK 225
                    +  PE +  G      + D++S G +L EL  GK
Sbjct: 158 YTNRVITLWYRPPE-LLLGATRYGPEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 24/92 (26%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTT------HVNDND---------------KLIGTF 192
           EI+ A+ +LH    + I++RD+KP         HV   D                  GT 
Sbjct: 108 EISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTI 164

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +      +  D +S GAL+ ++LTG
Sbjct: 165 EYMAPEILMRSGHGKAVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 24/95 (25%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIK------PFTTHV---------------NDNDKLIG 190
           A EI   + +LH    + I++RD+K          H+                      G
Sbjct: 102 AAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  +IAPE +     NE  D +SFG LL E+L G+
Sbjct: 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 34/155 (21%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR----------- 148
           H NI+  +G C       +  E+   G L D +      + +P   K             
Sbjct: 62  HPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQL 121

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-DKLIGTFG-------------- 193
           L+ A ++A  + YL     +  + RD+      V +N    I  FG              
Sbjct: 122 LQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMG 178

Query: 194 -----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E +       KSDV+SFG LL E+++
Sbjct: 179 RLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 29/129 (22%)

Query: 118 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK- 176
            V E+V  G L  +I      Q+  F   H +  A EIA  + +LH   S+ I++RD+K 
Sbjct: 78  FVMEYVNGGDLMYQIQ-----QVGRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKL 129

Query: 177 -----PFTTHVNDND---------------KLIGTFGFIAPECITTGNCNEKSDVYSFGA 216
                    H+   D                  GT  +IAPE I      +  D ++FG 
Sbjct: 130 DNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGV 189

Query: 217 LLLELLTGK 225
           LL E+L G+
Sbjct: 190 LLYEMLAGQ 198

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 37.0 bits (85), Expect = 0.004
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 34/159 (21%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDP--NGSQLEPFLMKH 147
           N I    +  + NI+ ++   L  +   +V E++A G+L D + +   +  Q+       
Sbjct: 66  NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA------ 119

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDND 186
              V  E   A+ +LH   S  ++ RDIK                       T   +   
Sbjct: 120 --AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174

Query: 187 KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            ++GT  ++APE +T      K D++S G + +E++ G+
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 27/149 (18%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG--SQLEPFLMKHRLKVAME 154
           Q SH NI++  G   + +  +++ E++  G L   + D +G  S  +   M   +   M+
Sbjct: 62  QFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMK 121

Query: 155 IANAVAYLH--------------------VGFSRPIVFRDIKPFTTHVNDNDKLIGTFGF 194
             + + Y+H                     G SR  V  D  P  T+     K+     +
Sbjct: 122 YLSDMNYVHRDLAARNILVNSNLECKVSDFGLSR--VLED-DPEGTYTTSGGKI--PIRW 176

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLT 223
            APE I        SDV+SFG ++ E+++
Sbjct: 177 TAPEAIAYRKFTSASDVWSFGIVMWEVMS 205

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	227
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.98
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.98
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.97
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.97
PHA02988	283	hypothetical protein; Provisional	99.97
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
KOG0198	313	consensus MEKK and related serine/threonine protei	99.97
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
KOG0605	550	consensus NDR and related serine/threonine kinases	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
PTZ00267	478	NIMA-related protein kinase; Provisional	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.96
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.96
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.96
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.96
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
KOG0589	426	consensus Serine/threonine protein kinase [General	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.96
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.96
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.96
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.96
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.96
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.96
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
KOG0610	459	consensus Putative serine/threonine protein kinase	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.96
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.96
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.96
PHA03212	391	serine/threonine kinase US3; Provisional	99.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.96
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.96
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.96
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.96
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.96
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.96
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.95
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.95
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.95
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.95
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.95
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.95
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.95
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.95
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.95
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.95
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.95
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.95
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.95
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.95
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.95
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.95
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.95
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
PHA03207	392	serine/threonine kinase US3; Provisional	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.95
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.95
KOG0584	632	consensus Serine/threonine protein kinase [General	99.95
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.95
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.95
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.95
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.95
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.95
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.95
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.95
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.95
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.95
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.95
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.95
PHA03211	461	serine/threonine kinase US3; Provisional	99.95
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.95
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.95
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.95
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.95
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.95
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.95
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.95
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.95
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.95
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.95
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.95
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.95
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.95
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
PTZ00036	440	glycogen synthase kinase; Provisional	99.95
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.95
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.95
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.95
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.95
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.95
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.94
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.94
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.94
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.94
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.94
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.94
PHA03209	357	serine/threonine kinase US3; Provisional	99.94
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.94
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.94
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.94
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.94
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.94
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.94
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.94
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.94
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.94
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.94
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.94
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.94
KOG0586	596	consensus Serine/threonine protein kinase [General	99.94
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.94
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.94
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.94
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.94
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.94
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.94
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.94
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.94
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.94
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.94
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.94
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.94
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.94
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.94
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.94
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.94
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.94
PTZ00284	467	protein kinase; Provisional	99.94
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.94
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.94
PHA03210	501	serine/threonine kinase US3; Provisional	99.94
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.93
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.93
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.93
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.93
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.93
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.93
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.93
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.93
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.93
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.93
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.93
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.93
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.93
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.93
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.93
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.93
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.93
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.93
KOG3653	534	consensus Transforming growth factor beta/activin	99.93
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.93
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.93
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.93
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.93
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.92
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.92
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.92
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.92
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.92
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.92
PLN00009	294	cyclin-dependent kinase A; Provisional	99.92
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.92
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.92
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.92
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.92
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.92
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.92
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.92
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.92
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.92
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.92
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.92
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.92
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.92
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.91
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.91
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.91
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.91
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.91
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.91
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.91
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.91
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.91
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.91
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.91
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.91
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.91
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.91
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.91
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.9
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.9
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.9
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.9
PHA02882	294	putative serine/threonine kinase; Provisional	99.9
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.9
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.9
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.9
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.9
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.9
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.89
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.89
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.89
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.89
PLN00181	793	protein SPA1-RELATED; Provisional	99.88
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.88
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.87
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.87
KOG1152	772	consensus Signal transduction serine/threonine kin	99.87
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.87
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.87
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.87
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.87
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.85
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.84
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.83
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.82
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.82
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.82
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.81
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.81
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.8
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.79
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.77
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.74
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.66
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.62
PRK10345	210	hypothetical protein; Provisional	99.57
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.56
PRK09188	365	serine/threonine protein kinase; Provisional	99.56
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.55
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.54
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.53
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.49
PRK12274	218	serine/threonine protein kinase; Provisional	99.48
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.48
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.43
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.41
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.39
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.39
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.31
PRK14879	211	serine/threonine protein kinase; Provisional	99.27
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.25
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.24
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.22
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.21
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.17
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.11
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.11
smart00090	237	RIO RIO-like kinase.	99.08
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.08
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.05
KOG1243	690	consensus Protein kinase [General function predict	99.02
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.84
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.75
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.69
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.62
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.52
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.47
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.46
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.35
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.31
KOG3087	229	consensus Serine/threonine protein kinase [General	98.3
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.28
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.22
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.21
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.12
COG4248	637	Uncharacterized protein with protein kinase and he	97.96
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.83
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.8
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.72
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.71
PRK09902	216	hypothetical protein; Provisional	97.64
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.63
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.37
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.99
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.81
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	96.79
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.5
COG0661	517	AarF Predicted unusual protein kinase [General fun	95.97
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.66
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.62
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	94.51
PLN02876	822	acyl-CoA dehydrogenase	94.48
KOG1235	538	consensus Predicted unusual protein kinase [Genera	94.44
PRK10593	297	hypothetical protein; Provisional	93.74
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.52
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	92.59
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	91.23
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	88.33
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	87.62
KOG2268	465	consensus Serine/threonine protein kinase [Signal	87.55
KOG2270	520	consensus Serine/threonine protein kinase involved	87.35
PHA03111	444	Ser/Thr kinase; Provisional	80.66

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-42  Score=288.10  Aligned_cols=177  Identities=41%  Similarity=0.745  Sum_probs=158.9

Q ss_pred             CcccccHHHHHHhhcCCCCCC------------eeecCCC---eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEE
Q 040292           46 PIRNFIALELEGATNNYDPGK------------GFLQDHP---ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVG  108 (227)
Q Consensus        46 ~~~~~~~~~l~~~~~~f~~~~------------~~~~~~~---vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g  108 (227)
                      ..+.|++.|+..||++|+..+            |.++++.   ||++.....+  .+|.  +|+.+|++++|||+|+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~--~Ei~~ls~l~H~Nlv~LlG  138 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFL--NEVEILSRLRHPNLVKLLG  138 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHH--HHHHHHhcCCCcCcccEEE
Confidence            678899999999999999766            7776633   9998877663  5688  9999999999999999999


Q ss_pred             EEeeCC-cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc
Q 040292          109 CCLETE-VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK  187 (227)
Q Consensus       109 ~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~  187 (227)
                      ||.+.+ ..+||+|||++|+|.++++.....   +++|..|+.|+.++|+||+|||+.+..+|+||||||+|||+|++..
T Consensus       139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~  215 (361)
T KOG1187|consen  139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFN  215 (361)
T ss_pred             EEecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCC
Confidence            999998 499999999999999999876532   7899999999999999999999988889999999999999996532


Q ss_pred             -------------e---------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 -------------L---------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 -------------~---------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                   .         .||.+|+|||+...+..+.|+||||||++++|++||++|
T Consensus       216 aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~  277 (361)
T KOG1187|consen  216 AKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKA  277 (361)
T ss_pred             EEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcc
Confidence                         1         589999999999999999999999999999999999975

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-38  Score=258.12  Aligned_cols=144  Identities=27%  Similarity=0.468  Sum_probs=131.7

Q ss_pred             eEEEcCCC-Cc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNL-NT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~-~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+.... ..   +...  +||.+|+.++|||||++++++..++..|||||||.||+|.++++..+     .+++..+.
T Consensus        40 IK~i~~~~l~~k~~e~L~--~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~-----~l~e~t~r  112 (429)
T KOG0595|consen   40 IKCIAKKKLNKKLVELLL--SEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRG-----RLPEATAR  112 (429)
T ss_pred             eeeehhhccCHHHHHHHH--HHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcC-----CCCHHHHH
Confidence            88887664 22   3445  99999999999999999999999999999999999999999999876     68999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC-C-------------------------ceecccCccccccccCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-D-------------------------KLIGTFGFIAPECITTG  203 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~-~-------------------------~~~g~~~y~aPE~~~~~  203 (227)
                      .++.|+|.||++||   +++|+||||||+|||++.. .                         +++|++.|||||++...
T Consensus       113 ~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~  189 (429)
T KOG0595|consen  113 HFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQ  189 (429)
T ss_pred             HHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhc
Confidence            99999999999999   9999999999999999874 1                         12799999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +|+.|+|+||.|+++|++++|++|
T Consensus       190 ~YdAKADLWSiG~Ilyq~l~g~~P  213 (429)
T KOG0595|consen  190 QYDAKADLWSIGTILYQCLTGKPP  213 (429)
T ss_pred             cccchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999987

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-36  Score=255.54  Aligned_cols=161  Identities=31%  Similarity=0.525  Sum_probs=139.9

Q ss_pred             hhcCCCCCC-eeecCCC---eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC-cceeEeecccCCCh
Q 040292           58 ATNNYDPGK-GFLQDHP---ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE-VPILVFEFVACGTL  128 (227)
Q Consensus        58 ~~~~f~~~~-~~~~~~~---vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~lV~E~~~~gsL  128 (227)
                      +++.|+.+. |.+.|..   ||.+......    ++|.  +|+.+|++++|||||+++|+|.+.. ..++|||||++|+|
T Consensus        50 G~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~--~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL  127 (362)
T KOG0192|consen   50 GSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFR--REASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSL  127 (362)
T ss_pred             ccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHH--HHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcH
Confidence            345555555 8887766   8888866543    3677  9999999999999999999999887 78999999999999


Q ss_pred             hhhhcCC-CCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC-eEEecCCCCceeecCCC-ce-----------------
Q 040292          129 ADRIHDP-NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP-IVFRDIKPFTTHVNDND-KL-----------------  188 (227)
Q Consensus       129 ~~~l~~~-~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~-i~H~dlkp~nil~~~~~-~~-----------------  188 (227)
                      .+++... .    ..+++..++.++.|||+||+|||   +.+ |+||||||+|+|++.+. .+                 
T Consensus       128 ~~~l~~~~~----~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~  200 (362)
T KOG0192|consen  128 SVLLHKKRK----RKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTS  200 (362)
T ss_pred             HHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccccc
Confidence            9999873 2    27999999999999999999999   788 99999999999999875 32                 


Q ss_pred             ----ecccCcccccccc--CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ----IGTFGFIAPECIT--TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ----~g~~~y~aPE~~~--~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                          .||+.|||||++.  ...|+.|+||||||+++|||+||+.|
T Consensus       201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~P  245 (362)
T KOG0192|consen  201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIP  245 (362)
T ss_pred             ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCC
Confidence                5888999999999  55899999999999999999999876

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-35  Score=239.38  Aligned_cols=145  Identities=26%  Similarity=0.394  Sum_probs=129.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCc-ceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEV-PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      .|.+......   ++..  +|++++.+.+||+||.+||+|+.++. ..++||||.+|||.+++...+     .+++...-
T Consensus       109 lK~I~~~~~~~~~~Qi~--rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g-----~i~E~~L~  181 (364)
T KOG0581|consen  109 LKVILLNIDPALQKQIL--RELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVG-----RIPEPVLG  181 (364)
T ss_pred             EEeecccCCHHHHHHHH--HHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcC-----CCCHHHHH
Confidence            6776444333   4455  99999999999999999999999985 999999999999999998654     68999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .++.++++||.|||.  .++|+||||||+|+|++..|.+                   +||..|||||.+.+..|+.++|
T Consensus       182 ~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sD  259 (364)
T KOG0581|consen  182 KIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSD  259 (364)
T ss_pred             HHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccc
Confidence            999999999999994  4899999999999999987754                   7999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||||+.++|+++|+-|
T Consensus       260 IWSLGLsllE~a~GrfP  276 (364)
T KOG0581|consen  260 IWSLGLSLLELAIGRFP  276 (364)
T ss_pred             eecccHHHHHHhhCCCC
Confidence            99999999999999866

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=245.07  Aligned_cols=157  Identities=26%  Similarity=0.452  Sum_probs=137.2

Q ss_pred             hcCCCCCC-eeecCCC---eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhc
Q 040292           59 TNNYDPGK-GFLQDHP---ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH  133 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~---vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~  133 (227)
                      ++.|..+. |.+++..   ||.++..... ++|.  +|+.+|++|+|+|||+++|+|..+.+.|||||||+.|+|.++|.
T Consensus       216 ~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~--~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr  293 (468)
T KOG0197|consen  216 SGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFL--REAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLR  293 (468)
T ss_pred             CCccceEEEEEEcCCCcccceEEeccccChhHHH--HHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhh
Confidence            55566655 8887774   9999875444 7898  99999999999999999999999899999999999999999998


Q ss_pred             CCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-e---------------------cc
Q 040292          134 DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-I---------------------GT  191 (227)
Q Consensus       134 ~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-~---------------------g~  191 (227)
                      ...+   ..+...+.+.++.|||+|++||.   ++++|||||.++|||++++..+ +                     -.
T Consensus       294 ~~~~---~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfP  367 (468)
T KOG0197|consen  294 TREG---GLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFP  367 (468)
T ss_pred             hcCC---CccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCC
Confidence            7332   25778889999999999999999   9999999999999999987644 1                     12


Q ss_pred             cCccccccccCCCCCchhhHHHHHHHHHHHHh
Q 040292          192 FGFIAPECITTGNCNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       192 ~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t  223 (227)
                      ..|+|||++..+.++.+||||||||+||||+|
T Consensus       368 IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT  399 (468)
T KOG0197|consen  368 IKWTAPEALNYGKFSSKSDVWSFGVLLWELFT  399 (468)
T ss_pred             ceecCHHHHhhCCcccccceeehhhhHHHHhc
Confidence            34999999999999999999999999999988

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4e-35  Score=240.97  Aligned_cols=146  Identities=27%  Similarity=0.402  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc-------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++.....       ..+.+.+|+++|++|+|||||++++++...+..|+||||+.||+|.+.+-...     .+.+.
T Consensus       202 iKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk-----~l~ed  276 (475)
T KOG0615|consen  202 IKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANK-----YLRED  276 (475)
T ss_pred             eeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhcc-----ccccc
Confidence            8887654322       12223499999999999999999999999999999999999999999997765     67788


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-----------------------ceecccCccccccccCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-----------------------KLIGTFGFIAPECITTG  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-----------------------~~~g~~~y~aPE~~~~~  203 (227)
                      ....++.|++.|+.|||   +.+|+||||||+|||+..+.                       +.||||.|.|||++.+.
T Consensus       277 ~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~k  353 (475)
T KOG0615|consen  277 LGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASK  353 (475)
T ss_pred             hhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecC
Confidence            88999999999999999   99999999999999998762                       23899999999999765


Q ss_pred             C---CCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 N---CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~---~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .   +..+.|+||+||+||-+++|.+|
T Consensus       354 g~~~~~~kVDiWSlGcvLfvcLsG~pP  380 (475)
T KOG0615|consen  354 GVEYYPSKVDIWSLGCVLFVCLSGYPP  380 (475)
T ss_pred             CeecccchheeeeccceEEEEeccCCC
Confidence            4   34588999999999999999998

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-34  Score=231.52  Aligned_cols=130  Identities=28%  Similarity=0.435  Sum_probs=124.8

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|..+|.+++||.||+++-.|+++...|||+||+.||.|..+|...+     .+++..+..++..|+.||.|||   +++
T Consensus        74 ~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg-----~F~E~~arfYlaEi~lAL~~LH---~~g  145 (357)
T KOG0598|consen   74 AERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREG-----RFSEDRARFYLAEIVLALGYLH---SKG  145 (357)
T ss_pred             HHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcC-----CcchhHHHHHHHHHHHHHHHHH---hCC
Confidence            89999999999999999999999999999999999999999998766     7899999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |+||||||+|||+|.+|.+                     +||+.|||||++....|+..+|.||+|+++|||++|.+|
T Consensus       146 IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pP  224 (357)
T KOG0598|consen  146 IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPP  224 (357)
T ss_pred             eeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCC
Confidence            9999999999999998754                     799999999999999999999999999999999999998

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-33  Score=241.70  Aligned_cols=144  Identities=26%  Similarity=0.413  Sum_probs=131.6

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|++......     +...  +||++.++|+|||||+++++|++.+..|+|.|+|++++|.++++.+.     ++++.++
T Consensus        48 ~KvVpk~~l~k~~~reKv~--~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk-----~ltEpEa  120 (592)
T KOG0575|consen   48 VKVVPKKLLKKPKQREKVL--NEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRK-----PLTEPEA  120 (592)
T ss_pred             EEEeehHHhcCcchHHHHH--HHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcC-----CCCcHHH
Confidence            8887663222     4556  99999999999999999999999999999999999999999998544     8999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---------------------eecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---------------------LIGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---------------------~~g~~~y~aPE~~~~~~~~~  207 (227)
                      +.++.||+.||.|||   +++|+|||||-.|++++++..                     +||||.|.|||++....++.
T Consensus       121 ry~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsf  197 (592)
T KOG0575|consen  121 RYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSF  197 (592)
T ss_pred             HHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCC
Confidence            999999999999999   999999999999999988632                     38999999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      .+||||+||++|.|+.|+||
T Consensus       198 EvDiWSlGcvmYtLL~G~PP  217 (592)
T KOG0575|consen  198 EVDIWSLGCVMYTLLVGRPP  217 (592)
T ss_pred             chhhhhhhhHHHhhhhCCCC
Confidence            99999999999999999998

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-34  Score=226.96  Aligned_cols=139  Identities=27%  Similarity=0.404  Sum_probs=119.8

Q ss_pred             chhHHHHHhcCCCcccceeEE-EEeeCCc-ceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           88 CFNCIAFASQMSHKNILKFVG-CCLETEV-PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        88 ~~~Ei~~l~~l~H~niv~l~g-~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      ++.|+.+|++|+|||||++++ .+.+++. .++|||+|.+|+|...+..... +.+.++++.++.++.|++.||..+|.-
T Consensus        65 ~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~-qkr~ipE~~Vwk~f~QL~~AL~~cH~~  143 (375)
T KOG0591|consen   65 CVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKK-QKRLIPEKTVWKYFVQLCRALYHCHSK  143 (375)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHh-ccccCchHHHHHHHHHHHHHHHHHhcc
Confidence            349999999999999999998 5555555 8899999999999998864322 223789999999999999999999942


Q ss_pred             C-CCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh
Q 040292          166 F-SRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       166 ~-~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t  223 (227)
                      . ...++||||||.||+++.+|.+                     +|||+||+||.+....|+.+|||||+||++|||+.
T Consensus       144 ~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMca  223 (375)
T KOG0591|consen  144 IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCA  223 (375)
T ss_pred             ccccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHh
Confidence            1 1249999999999999988754                     79999999999999999999999999999999998


Q ss_pred             CCCC
Q 040292          224 GKKG  227 (227)
Q Consensus       224 g~~p  227 (227)
                      =++|
T Consensus       224 L~~P  227 (375)
T KOG0591|consen  224 LQSP  227 (375)
T ss_pred             cCCC
Confidence            7766

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-34  Score=241.00  Aligned_cols=145  Identities=24%  Similarity=0.409  Sum_probs=132.8

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      ||++........=.+++|+.+|+..+|+|||.+++.|..++..|.|||||+||+|.|.+...      .+++.++..++.
T Consensus       303 iK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~------~~~E~qIA~Icr  376 (550)
T KOG0578|consen  303 IKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT------RMTEGQIAAICR  376 (550)
T ss_pred             EEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc------cccHHHHHHHHH
Confidence            88887666553333459999999999999999999999999999999999999999999764      589999999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHH
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVY  212 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~Dvw  212 (227)
                      ++++||+|||   .++|+|||||.+||+++.++.+                     +|||+|||||++....|+++.|||
T Consensus       377 e~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIW  453 (550)
T KOG0578|consen  377 EILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIW  453 (550)
T ss_pred             HHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccch
Confidence            9999999999   9999999999999999887643                     799999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCC
Q 040292          213 SFGALLLELLTGKKG  227 (227)
Q Consensus       213 S~G~il~el~tg~~p  227 (227)
                      |||++++||+.|++|
T Consensus       454 SLGIMaIEMveGEPP  468 (550)
T KOG0578|consen  454 SLGIMAIEMVEGEPP  468 (550)
T ss_pred             hhhhHHHHHhcCCCC
Confidence            999999999999998

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2e-33  Score=222.61  Aligned_cols=144  Identities=28%  Similarity=0.415  Sum_probs=132.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|+++....-     +...  +|..+|+.+.||.++++++.|.+.+..|+||||.+||.|..+++..+     .+++..+
T Consensus        74 mKvL~k~~vVklKQveH~~--nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~-----rF~e~~a  146 (355)
T KOG0616|consen   74 MKVLDKQKVVKLKQVEHTH--NEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSG-----RFSEPHA  146 (355)
T ss_pred             hhhcCHHHHHHHHHHHHHh--hHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcC-----CCCchhH
Confidence            7777654322     3445  99999999999999999999999999999999999999999999765     7999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.++.||+.||+|||   ++.|++|||||+|||+|.+|.+                  ||||.|+|||.+....++..+|
T Consensus       147 rFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavD  223 (355)
T KOG0616|consen  147 RFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVD  223 (355)
T ss_pred             HHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchh
Confidence            999999999999999   9999999999999999998743                  8999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      .|||||++|||+.|.+|
T Consensus       224 WWalGVLIYEMlaG~pP  240 (355)
T KOG0616|consen  224 WWALGVLIYEMLAGYPP  240 (355)
T ss_pred             HHHHHHHHHHHHcCCCC
Confidence            99999999999999998

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.98  E-value=2.8e-33  Score=238.16  Aligned_cols=146  Identities=29%  Similarity=0.520  Sum_probs=130.7

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      |.+++..  ||+++...     .  .+|+-|++|+||||+.+.|+|.+...+|+|||||+.|-|.++|+...     ++.
T Consensus       143 Grl~netVAVKKV~elk-----E--TdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~-----~it  210 (904)
T KOG4721|consen  143 GRLHNETVAVKKVRELK-----E--TDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGR-----PIT  210 (904)
T ss_pred             eeccCceehhHHHhhhh-----h--hhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccC-----ccC
Confidence            6666665  77776431     2  77999999999999999999999999999999999999999998765     677


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCC
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~  204 (227)
                      ......+..+||.|++|||   .+.|+|||||.-|||++.+..+                    .||..|||||++.+..
T Consensus       211 p~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrneP  287 (904)
T KOG4721|consen  211 PSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEP  287 (904)
T ss_pred             HHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCC
Confidence            7888899999999999999   9999999999999999866543                    6999999999999999


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.|+|||||||+||||+||..|
T Consensus       288 csEKVDIwSfGVVLWEmLT~EiP  310 (904)
T KOG4721|consen  288 CSEKVDIWSFGVVLWEMLTGEIP  310 (904)
T ss_pred             cccccceehhHHHHHHHHhcCCC
Confidence            99999999999999999999876

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.98  E-value=4.1e-32  Score=228.10  Aligned_cols=174  Identities=22%  Similarity=0.291  Sum_probs=141.5

Q ss_pred             CcccccHHHHHHhhcC-CCCCC-eee--cCCC--eEEEcCCCCccccc--chhHHHHHhcCCCcccceeEEEEeeC--Cc
Q 040292           46 PIRNFIALELEGATNN-YDPGK-GFL--QDHP--ISEFGDNLNTEEYY--CFNCIAFASQMSHKNILKFVGCCLET--EV  115 (227)
Q Consensus        46 ~~~~~~~~~l~~~~~~-f~~~~-~~~--~~~~--vK~~~~~~~~~~~~--~~~Ei~~l~~l~H~niv~l~g~~~~~--~~  115 (227)
                      +.+.-.|+.++....+ |+.++ +.-  .+..  +|++.-+.....|-  +++||.+|++|+||||++|.+...+.  ..
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~s  192 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGS  192 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCce
Confidence            3444566777666554 44444 221  2322  88887665444332  45999999999999999999998876  68


Q ss_pred             ceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------
Q 040292          116 PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------  188 (227)
Q Consensus       116 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------  188 (227)
                      .|||+|||++ +|.-++....-    .+++.++..++.|++.||+|||   .++++|||||.+|||+|.+|.+       
T Consensus       193 iYlVFeYMdh-DL~GLl~~p~v----kft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGL  264 (560)
T KOG0600|consen  193 IYLVFEYMDH-DLSGLLSSPGV----KFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGL  264 (560)
T ss_pred             EEEEEecccc-hhhhhhcCCCc----ccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccc
Confidence            9999999985 99888876543    6899999999999999999999   9999999999999999998754       


Q ss_pred             ---------------ecccCccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ---------------IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ---------------~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                     +-|.+|.|||.+.+. .|+...|+||.|||+.||++|++.
T Consensus       265 Ar~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI  319 (560)
T KOG0600|consen  265 ARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPI  319 (560)
T ss_pred             eeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCC
Confidence                           578899999999987 499999999999999999999873

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-32  Score=232.18  Aligned_cols=170  Identities=24%  Similarity=0.364  Sum_probs=141.2

Q ss_pred             cccHHHHHHhhcCCCCCC-eee--cCCC--eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeE
Q 040292           49 NFIALELEGATNNYDPGK-GFL--QDHP--ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILV  119 (227)
Q Consensus        49 ~~~~~~l~~~~~~f~~~~-~~~--~~~~--vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV  119 (227)
                      .|.|+++.+.. .|+.+. +.-  .+..  ||++...-.-   +.-.+..|-.+|.+| .||.|++|+-.|.++..+|+|
T Consensus        74 DF~Fg~~lGeG-SYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   74 DFKFGKILGEG-SYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hcchhheeccc-cceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            47777765543 344443 222  2222  7777544222   111123788889999 999999999999999999999


Q ss_pred             eecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------
Q 040292          120 FEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------  188 (227)
Q Consensus       120 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------  188 (227)
                      +||+++|+|.++|+..+     .+++..++.++.+|+.||+|||   +++|+||||||+|||++.++.+           
T Consensus       153 Le~A~nGdll~~i~K~G-----sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKYG-----SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEecCCCcHHHHHHHhC-----cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence            99999999999999876     7999999999999999999999   9999999999999999987643           


Q ss_pred             -----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                             +||..|.+||++.+...+..+|+|+|||++|+|+.|++|
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PP  286 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPP  286 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCC
Confidence                                   799999999999999999999999999999999999998

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.4e-32  Score=243.14  Aligned_cols=149  Identities=26%  Similarity=0.503  Sum_probs=131.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC--------CC-Cc
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG--------SQ-LE  141 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~--------~~-~~  141 (227)
                      ||.++.....   ++|+  +|+++|..++|||||+++|+|.++++.|+|+|||.+|+|.++|....+        .. +.
T Consensus       521 VK~LKd~a~~~~~~dF~--REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~  598 (774)
T KOG1026|consen  521 VKALKDKAENQARQDFR--REAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPP  598 (774)
T ss_pred             HhhhcccccHHHHHHHH--HHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCC
Confidence            9999887665   6899  999999999999999999999999999999999999999999975432        11 23


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPE  198 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE  198 (227)
                      +++..+.+.++.|||.|++||-   ++.++||||..+|+|++++..+                       .-...||+||
T Consensus       599 ~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppE  675 (774)
T KOG1026|consen  599 PLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPE  675 (774)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHH
Confidence            5888999999999999999999   9999999999999999876543                       2345699999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+.+++|+.+||||||||+|||++| |+.|
T Consensus       676 sIly~kFTteSDVWs~GVvLWEIFsyG~QP  705 (774)
T KOG1026|consen  676 SILYGKFTTESDVWSFGVVLWEIFSYGKQP  705 (774)
T ss_pred             HhhcCcccchhhhhhhhhhhhhhhccccCc
Confidence            9999999999999999999999987 5554

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.8e-31  Score=225.82  Aligned_cols=130  Identities=29%  Similarity=0.462  Sum_probs=121.4

Q ss_pred             hHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           90 NCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        90 ~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      +|+.++++++ ||||+++++++......++||||+.||+|.+++...+     ++.+..+..++.|++.|++|||   ++
T Consensus        68 rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g-----~l~E~~ar~~F~Qlisav~y~H---~~  139 (370)
T KOG0583|consen   68 REISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKG-----RLKEDEARKYFRQLISAVAYCH---SR  139 (370)
T ss_pred             HHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcC-----CCChHHHHHHHHHHHHHHHHHH---hC
Confidence            8999999998 9999999999999999999999999999999998854     7889999999999999999999   99


Q ss_pred             CeEEecCCCCceeecCC-Cce---------------------ecccCccccccccCCC-CC-chhhHHHHHHHHHHHHhC
Q 040292          169 PIVFRDIKPFTTHVNDN-DKL---------------------IGTFGFIAPECITTGN-CN-EKSDVYSFGALLLELLTG  224 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~-~~~---------------------~g~~~y~aPE~~~~~~-~~-~~~DvwS~G~il~el~tg  224 (227)
                      +|+||||||+|++++.+ +.+                     +||+.|+|||++.+.. |+ .++||||+|++||.|++|
T Consensus       140 gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G  219 (370)
T KOG0583|consen  140 GIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCG  219 (370)
T ss_pred             CEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhC
Confidence            99999999999999987 433                     7999999999999877 75 789999999999999999


Q ss_pred             CCC
Q 040292          225 KKG  227 (227)
Q Consensus       225 ~~p  227 (227)
                      +.|
T Consensus       220 ~~P  222 (370)
T KOG0583|consen  220 RLP  222 (370)
T ss_pred             CCC
Confidence            987

>PHA02988 hypothetical protein; Provisional

Probab=99.97  E-value=4e-31  Score=217.29  Aligned_cols=151  Identities=21%  Similarity=0.363  Sum_probs=128.6

Q ss_pred             eeecCCC--eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCC
Q 040292           67 GFLQDHP--ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDP  135 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~  135 (227)
                      |..++..  ||.++.....     +.|.  +|+.+|++++||||++++|++.+    ....++||||+++|+|.+++...
T Consensus        39 ~~~~~~~vavK~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  116 (283)
T PHA02988         39 GIFNNKEVIIRTFKKFHKGHKVLIDITE--NEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE  116 (283)
T ss_pred             EEECCEEEEEEeccccccccHHHHHHHH--HHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC
Confidence            6666655  8888754332     3455  99999999999999999999977    34678999999999999999764


Q ss_pred             CCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce------------------ecccCccc
Q 040292          136 NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIA  196 (227)
Q Consensus       136 ~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~a  196 (227)
                      .     .+++.....++.|++.||.|||   . .+++||||||+|+++++++.+                  .|+..|+|
T Consensus       117 ~-----~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~a  188 (283)
T PHA02988        117 K-----DLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFS  188 (283)
T ss_pred             C-----CCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccccC
Confidence            3     6788899999999999999999   6 478899999999999987543                  46788999


Q ss_pred             cccccC--CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          197 PECITT--GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       197 PE~~~~--~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||.+.+  ..++.++|||||||++|||++|+.|
T Consensus       189 PE~~~~~~~~~~~k~Di~SlGvil~el~~g~~P  221 (283)
T PHA02988        189 YKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIP  221 (283)
T ss_pred             HHHhhhccccccchhhhhHHHHHHHHHHHCCCC
Confidence            999976  5789999999999999999999987

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.9e-31  Score=229.08  Aligned_cols=146  Identities=25%  Similarity=0.360  Sum_probs=131.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   ....+.+||.+|+-+.||||+++|+++.+....|||.||+++|.|++++-..+     ++++.++..
T Consensus        42 iKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG-----~l~e~eaa~  116 (786)
T KOG0588|consen   42 IKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKG-----PLPEREAAH  116 (786)
T ss_pred             EEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhC-----CCCCHHHHH
Confidence            8888765221   22223399999999999999999999999999999999999999999998776     799999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCC-Cchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNC-NEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~-~~~~  209 (227)
                      +++||+.|+.|||   ..+|+||||||+|+++|..+.+                    ||+|.|.|||.+.+.+| +.++
T Consensus       117 ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~s  193 (786)
T KOG0588|consen  117 FFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPS  193 (786)
T ss_pred             HHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCcc
Confidence            9999999999999   9999999999999999986543                    89999999999999887 5889


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||.|||||.|+||+.|
T Consensus       194 DVWSCGVILfALLtG~LP  211 (786)
T KOG0588|consen  194 DVWSCGVILFALLTGKLP  211 (786)
T ss_pred             ccchhHHHHHHHHhCCCC
Confidence            999999999999999987

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=9.5e-32  Score=220.53  Aligned_cols=145  Identities=30%  Similarity=0.464  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCC--cceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETE--VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||........  +.+.  +|+.+|++++|||||+++|......  .+++.|||+++|+|.+++...++    .+++..+.
T Consensus        47 vK~v~~~~~~~~~~l~--~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~----~l~E~~v~  120 (313)
T KOG0198|consen   47 VKSVELEDSPTSESLE--REIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG----KLPEPLVR  120 (313)
T ss_pred             eeeeecccchhHHHHH--HHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCC----CCCHHHHH
Confidence            8877665222  3456  9999999999999999999754444  58899999999999999987654    58999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-CCc------------------------eecccCccccccccCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDK------------------------LIGTFGFIAPECITTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-~~~------------------------~~g~~~y~aPE~~~~~~  204 (227)
                      .+.+|+++||+|||   +++++|+||||+|||++. ++.                        ..||+.|||||++.++.
T Consensus       121 ~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~  197 (313)
T KOG0198|consen  121 RYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGE  197 (313)
T ss_pred             HHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCC
Confidence            99999999999999   999999999999999988 332                        26899999999998643


Q ss_pred             -CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 -CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 -~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       ...++||||+||++.||+||++|
T Consensus       198 ~~~~~sDiWSlGCtVvEM~Tg~~P  221 (313)
T KOG0198|consen  198 VARRESDIWSLGCTVVEMLTGKPP  221 (313)
T ss_pred             cCCccchhhhcCCEEEeccCCCCc
Confidence             34599999999999999999887

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.97  E-value=7.1e-32  Score=214.53  Aligned_cols=145  Identities=23%  Similarity=0.360  Sum_probs=125.2

Q ss_pred             eEEEcCCCCccc--ccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTEE--YYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~~--~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||++..+.....  -.+++||++|++++|+|+|.++++|......+||+|||+..-|.++-....     -++......+
T Consensus        32 IKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~-----G~~~~~vk~~  106 (396)
T KOG0593|consen   32 IKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPN-----GVPSELVKKY  106 (396)
T ss_pred             EEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccC-----CCCHHHHHHH
Confidence            899887766532  225599999999999999999999999999999999998754444433333     5788889999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~~~  209 (227)
                      +.|++.|+.|+|   +++++||||||+||+++.++.+                     +.|.+|.|||.+.+ ..|+.++
T Consensus       107 l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pV  183 (396)
T KOG0593|consen  107 LYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPV  183 (396)
T ss_pred             HHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcc
Confidence            999999999999   9999999999999999988754                     57889999999987 5799999


Q ss_pred             hHHHHHHHHHHHHhCCC
Q 040292          210 DVYSFGALLLELLTGKK  226 (227)
Q Consensus       210 DvwS~G~il~el~tg~~  226 (227)
                      ||||.||++.||++|.+
T Consensus       184 DiWAiGCv~aEl~~G~p  200 (396)
T KOG0593|consen  184 DIWAIGCVFAELLTGEP  200 (396)
T ss_pred             cchhhhHHHHHHhcCCc
Confidence            99999999999999985

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=2.2e-31  Score=226.47  Aligned_cols=143  Identities=22%  Similarity=0.355  Sum_probs=129.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    ....  +|+++++.++|||||.++++|+...+.++|.||+.| +|..++...+     .++++.+.
T Consensus        32 ik~i~K~gr~~k~l~~l~--~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~-----~lpEe~v~  103 (808)
T KOG0597|consen   32 IKFIDKSGRNEKELKNLR--QEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDG-----KLPEEQVR  103 (808)
T ss_pred             EEEehhcCCchHHHHHHH--HHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhcc-----CCCHHHHH
Confidence            6666544333    2355  999999999999999999999999999999999985 9999998765     79999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.++..||.|||   +++|+|||+||+||+++..+.+                     .|||.|||||.+.+..|+..
T Consensus       104 ~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~  180 (808)
T KOG0597|consen  104 AIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHT  180 (808)
T ss_pred             HHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccch
Confidence            99999999999999   9999999999999999887643                     69999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|.||+||++||+.+|++|
T Consensus       181 sDlWslGcilYE~~~G~PP  199 (808)
T KOG0597|consen  181 SDLWSLGCILYELYVGQPP  199 (808)
T ss_pred             hhHHHHHHHHHHHhcCCCC
Confidence            9999999999999999998

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6e-31  Score=218.33  Aligned_cols=146  Identities=23%  Similarity=0.321  Sum_probs=130.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||+++-+..+   +..+  +|+..|+.++||||++++..|..+...|+||.||.+||+.+.+...-.   .-+.+..+..
T Consensus        56 IK~inLEkc~~~ld~l~--kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~---~Gl~E~~Ia~  130 (516)
T KOG0582|consen   56 IKIINLEKCNNDLDALR--KEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYP---DGLEEASIAT  130 (516)
T ss_pred             EEEeehhhhhhhHHHHH--HHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHcc---ccccHHHHHH
Confidence            9998766555   4455  999999999999999999999999999999999999999999975432   2478888999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCC--
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTG--  203 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~--  203 (227)
                      +.+++++||.|||   .++.+|||+|+.|||++++|.+                         +||+.|||||++...  
T Consensus       131 iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~  207 (516)
T KOG0582|consen  131 ILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLH  207 (516)
T ss_pred             HHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhccc
Confidence            9999999999999   9999999999999999998764                         689999999996543  


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .|+.|+||||||++..|+++|..|
T Consensus       208 GYdfKaDIwSfGITA~ELA~G~aP  231 (516)
T KOG0582|consen  208 GYDFKADIWSFGITACELAHGHAP  231 (516)
T ss_pred             CccchhhhhhhhHHHHHHhcCCCC
Confidence            589999999999999999999987

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=8.6e-31  Score=222.46  Aligned_cols=144  Identities=18%  Similarity=0.238  Sum_probs=127.2

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++.+++||||+++++.+.++...|+||||+++|+|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~l~~~~~  103 (363)
T cd05628          31 MKILRKADMLEKEQVGHIR--AERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD-----TLTEEET  103 (363)
T ss_pred             EEEEEHHHHHHhhHHHHHH--HHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            8887643211     3455  89999999999999999999999999999999999999999997643     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------------------------  187 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------------------------  187 (227)
                      ..++.|++.||+|||   +++|+||||||+||+++.++.                                         
T Consensus       104 ~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (363)
T cd05628         104 QFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKR  180 (363)
T ss_pred             HHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccccccccccccccccccc
Confidence            999999999999999   999999999999999976542                                         


Q ss_pred             ---------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 ---------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 ---------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                     .+||+.|+|||++.+..++.++|+|||||++|||++|+.|
T Consensus       181 ~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P  235 (363)
T cd05628         181 KAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (363)
T ss_pred             ccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence                           2478899999999988899999999999999999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=5.6e-31  Score=221.87  Aligned_cols=144  Identities=23%  Similarity=0.342  Sum_probs=127.7

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+.....     .+.+.  +|+.+++.++||||+++++++..++..++||||+++|+|.+++....     .+++..+
T Consensus        61 vK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~-----~~~~~~~  133 (340)
T PTZ00426         61 IKRFEKSKIIKQKQVDHVF--SERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNK-----RFPNDVG  133 (340)
T ss_pred             EEEEEHHHhhhhhhHHHHH--HHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHHH
Confidence            777754321     13455  89999999999999999999999999999999999999999997654     6888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                  .||+.|+|||++.+..++.++|
T Consensus       134 ~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  210 (340)
T PTZ00426        134 CFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAAD  210 (340)
T ss_pred             HHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCcccc
Confidence            999999999999999   9999999999999999876543                  4788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +|||||++|||++|+.|
T Consensus       211 iwSlGvil~ell~G~~P  227 (340)
T PTZ00426        211 WWTLGIFIYEILVGCPP  227 (340)
T ss_pred             ccchhhHHHHHhcCCCC
Confidence            99999999999999987

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.1e-31  Score=216.89  Aligned_cols=144  Identities=26%  Similarity=0.390  Sum_probs=127.4

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.++++++||||+++++++.+++..++||||+++|+|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~  103 (291)
T cd05612          31 LKVMAIPEVIRLKQEQHVH--NEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG-----RFSNSTG  103 (291)
T ss_pred             EEEEEHHHHhhhHHHHHHH--HHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcC-----CCCHHHH
Confidence            787754321     13466  99999999999999999999999999999999999999999997654     6888899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||+|||   +++++||||||+||+++.++.+                  .|++.|+|||.+.+..++.++|
T Consensus       104 ~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (291)
T cd05612         104 LFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVD  180 (291)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhh
Confidence            999999999999999   9999999999999999876543                  4788999999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      ||||||++|+|++|+.|
T Consensus       181 iwSlG~il~~l~~g~~p  197 (291)
T cd05612         181 WWALGILIYEMLVGYPP  197 (291)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-31  Score=212.34  Aligned_cols=169  Identities=23%  Similarity=0.353  Sum_probs=139.9

Q ss_pred             cHHHHHHhhcCCCCCC---------eeecCCC--eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCccee
Q 040292           51 IALELEGATNNYDPGK---------GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPIL  118 (227)
Q Consensus        51 ~~~~l~~~~~~f~~~~---------~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~l  118 (227)
                      +|.++++.|+..-...         .+..|..  ||.+.....-..-++++|+.++.+. .|+||++++++|+++..+||
T Consensus        74 ~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYL  153 (463)
T KOG0607|consen   74 KFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYL  153 (463)
T ss_pred             hHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEE
Confidence            4677777665533322         2224444  8888776544444455999999999 79999999999999999999


Q ss_pred             EeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------
Q 040292          119 VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------  188 (227)
Q Consensus       119 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------  188 (227)
                      |||.|.||+|..++....     .+++.++..+..+|+.||.+||   .++|.||||||+|||..+...+          
T Consensus       154 VfEKm~GGplLshI~~~~-----~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL  225 (463)
T KOG0607|consen  154 VFEKMRGGPLLSHIQKRK-----HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDL  225 (463)
T ss_pred             EEecccCchHHHHHHHhh-----hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeecccc
Confidence            999999999999998765     7999999999999999999999   9999999999999998764322          


Q ss_pred             ---------------------ecccCcccccccc-----CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ---------------------IGTFGFIAPECIT-----TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ---------------------~g~~~y~aPE~~~-----~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                           +|+..|||||++.     ...|+.++|.||+|+++|-|++|.+|
T Consensus       226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpP  290 (463)
T KOG0607|consen  226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPP  290 (463)
T ss_pred             ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCC
Confidence                                 6778899999873     23588999999999999999999988

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.7e-31  Score=218.04  Aligned_cols=144  Identities=21%  Similarity=0.295  Sum_probs=127.1

Q ss_pred             eEEEcCCCC---c--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN---T--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~---~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+.....   .  ..+.  +|+.++.+++||||+++++++..++..++||||+++|+|.+++....     .+++..+
T Consensus        23 iK~i~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~   95 (312)
T cd05585          23 LKTIRKAHIVSRSEVTHTL--AERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREG-----RFDLSRA   95 (312)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            787764321   1  3445  89999999999999999999999999999999999999999997643     6888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++.
T Consensus        96 ~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  172 (312)
T cd05585          96 RFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTK  172 (312)
T ss_pred             HHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCC
Confidence            999999999999999   9999999999999999876532                     4888999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|++|+.|
T Consensus       173 ~~DvwslGvil~el~tg~~p  192 (312)
T cd05585         173 AVDWWTLGVLLYEMLTGLPP  192 (312)
T ss_pred             ccceechhHHHHHHHhCCCC
Confidence            99999999999999999987

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=6.5e-31  Score=220.41  Aligned_cols=144  Identities=23%  Similarity=0.366  Sum_probs=127.7

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++....     .+++..+
T Consensus        48 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~  120 (329)
T PTZ00263         48 IKCLKKREILKMKQVQHVA--QEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG-----RFPNDVA  120 (329)
T ss_pred             EEEEEHHHHhhhhhHHHHH--HHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcC-----CCCHHHH
Confidence            787764321     13456  99999999999999999999999999999999999999999997654     5788888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||+|||   +++++||||||+||+++.++.+                  .|++.|+|||.+.+..++.++|
T Consensus       121 ~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  197 (329)
T PTZ00263        121 KFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVD  197 (329)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcce
Confidence            999999999999999   9999999999999999876543                  4788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +|||||++|+|++|+.|
T Consensus       198 iwslG~il~elltg~~p  214 (329)
T PTZ00263        198 WWTMGVLLYEFIAGYPP  214 (329)
T ss_pred             eechHHHHHHHHcCCCC
Confidence            99999999999999987

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=4.7e-31  Score=217.24  Aligned_cols=146  Identities=21%  Similarity=0.329  Sum_probs=130.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.+...   +...+.+||++|+.|+||||+.+|++|.+.+...+||||..+|.|+|++...+     .+++.++..
T Consensus        83 iKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~-----~LsErEaRh  157 (668)
T KOG0611|consen   83 IKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERG-----SLSEREARH  157 (668)
T ss_pred             hhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhc-----cccHHHHHH
Confidence            6766655443   22223399999999999999999999999999999999999999999998876     799999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCC-Cchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNC-NEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~-~~~~  209 (227)
                      +++||..|+.|||   .++++|||||-+|||+|.++.+                    ||++-|.+||.+.+..| ++..
T Consensus       158 fFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEV  234 (668)
T KOG0611|consen  158 FFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEV  234 (668)
T ss_pred             HHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCcc
Confidence            9999999999999   9999999999999999988754                    79999999999998887 6889


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |.||+|++||.++.|..|
T Consensus       235 DsWsLGvLLYtLVyGtMP  252 (668)
T KOG0611|consen  235 DSWSLGVLLYTLVYGTMP  252 (668)
T ss_pred             chhhHHHHHHHHhhcccc
Confidence            999999999999999876

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=8.7e-31  Score=219.08  Aligned_cols=144  Identities=18%  Similarity=0.290  Sum_probs=127.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     ..+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++....     .+++..+
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~   97 (323)
T cd05571          25 MKILKKEVIIAKDEVAHTL--TESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRA   97 (323)
T ss_pred             EEEEEHHHhhhhHHHHHHH--HHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHHH
Confidence            7877643211     3444  89999999999999999999999999999999999999999987643     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||+|||   +.+++||||||+||+++.++.+                     +||+.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05571          98 RFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCc
Confidence            999999999999999   9999999999999999876532                     4789999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+||++|||++|+.|
T Consensus       175 ~~DiwSlG~il~elltg~~P  194 (323)
T cd05571         175 AVDWWGLGVVMYEMMCGRLP  194 (323)
T ss_pred             cccCcccchhhhhhhcCCCC
Confidence            99999999999999999977

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=2.2e-30  Score=216.71  Aligned_cols=144  Identities=19%  Similarity=0.310  Sum_probs=126.8

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     ..+.  +|+.++++++||||+++++++...+..++||||+++|+|.+++....     .+++..+
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-----~~~~~~~   97 (323)
T cd05595          25 MKILRKEVIIAKDEVAHTV--TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERA   97 (323)
T ss_pred             EEEEEHHHhhhhHHHHHHH--HHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHHH
Confidence            7877653211     3445  89999999999999999999999999999999999999998887543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++++||||||+||+++.++.+                     .|++.|+|||.+.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (323)
T cd05595          98 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  174 (323)
T ss_pred             HHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCc
Confidence            999999999999999   9999999999999999876532                     4788999999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+|||||++|||++|+.|
T Consensus       175 ~~DiwSlGvil~ell~g~~P  194 (323)
T cd05595         175 AVDWWGLGVVMYEMMCGRLP  194 (323)
T ss_pred             hhchhhhHHHHHHHHhCCCC
Confidence            99999999999999999976

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.97  E-value=2e-30  Score=219.35  Aligned_cols=144  Identities=18%  Similarity=0.278  Sum_probs=131.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|+++.+.-.     ....  .|-.+|...++|+||+++-.|.+...+||||||++||++..+|...+     .+++.++
T Consensus       171 mK~LkKS~M~~~~Qv~hV~--aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~-----~L~e~~a  243 (550)
T KOG0605|consen  171 MKILKKSEMLKKNQVEHVR--AERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKD-----TLTEDWA  243 (550)
T ss_pred             eecccHHHHHhhhhHHHHH--HHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcC-----cCchHHH
Confidence            7888765433     3444  88889999999999999999999999999999999999999998765     8999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------------------  188 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------------------  188 (227)
                      ..++.+++.|++-+|   ..+++||||||+|+|+|..|.+                                        
T Consensus       244 rfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (550)
T KOG0605|consen  244 RFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPK  320 (550)
T ss_pred             HHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccc
Confidence            999999999999999   9999999999999999986533                                        


Q ss_pred             ----------------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ----------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ----------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                                  +|||-|+|||++.+..|+..+|.||+|||+|||+.|.+|
T Consensus       321 ~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPP  387 (550)
T KOG0605|consen  321 FNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPP  387 (550)
T ss_pred             cccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCC
Confidence                                        699999999999999999999999999999999999998

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=1.2e-30  Score=222.98  Aligned_cols=144  Identities=18%  Similarity=0.274  Sum_probs=126.6

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++.+++||||+++++++.+++..++||||+++|+|.+++....     .+++..+
T Consensus        31 iK~i~~~~~~~~~~~~~~~--~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~e~~~  103 (381)
T cd05626          31 MKTLRKKDVLNRNQVAHVK--AERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRME-----VFPEVLA  103 (381)
T ss_pred             EEEEEHHHhhhhHHHHHHH--HHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcC-----CCCHHHH
Confidence            8887653221     3456  89999999999999999999999999999999999999999987643     5788888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------------------------  187 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------------------------  187 (227)
                      ..++.|++.||+|||   ..+|+||||||+||+++.++.                                         
T Consensus       104 ~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (381)
T cd05626         104 RFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDV  180 (381)
T ss_pred             HHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccc
Confidence            999999999999999   999999999999999975432                                         


Q ss_pred             ---------------------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 ---------------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 ---------------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                                 .+||+.|+|||.+.+..++.++|||||||++|||++|+.|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~P  247 (381)
T cd05626         181 SNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPP  247 (381)
T ss_pred             cccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCC
Confidence                                       2478899999999888899999999999999999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=1.8e-30  Score=217.67  Aligned_cols=144  Identities=19%  Similarity=0.304  Sum_probs=127.0

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     ..+.  +|+.+++.++||||+++++++...+..++||||+++|+|.+++....     .+++..+
T Consensus        25 vK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~-----~l~~~~~   97 (328)
T cd05593          25 MKILKKEVIIAKDEVAHTL--TESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRER-----VFSEDRT   97 (328)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcC-----CCCHHHH
Confidence            7887654211     3455  89999999999999999999999999999999999999998886543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++.
T Consensus        98 ~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  174 (328)
T cd05593          98 RFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGR  174 (328)
T ss_pred             HHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCc
Confidence            999999999999999   9999999999999999875432                     4788999999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+|||||++|+|++|+.|
T Consensus       175 ~~DiwslGvil~elltG~~P  194 (328)
T cd05593         175 AVDWWGLGVVMYEMMCGRLP  194 (328)
T ss_pred             cCCccccchHHHHHhhCCCC
Confidence            99999999999999999987

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=4.1e-30  Score=225.65  Aligned_cols=137  Identities=23%  Similarity=0.300  Sum_probs=121.7

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.+|+.++||||++++++|..++..++||||+++|+|.+++....... .++++..+..++.|++.||.||| 
T Consensus       111 ~~~--~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~-~~l~~~~~~~i~~qi~~aL~~lH-  186 (478)
T PTZ00267        111 YAR--SELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEH-LPFQEYEVGLLFYQIVLALDEVH-  186 (478)
T ss_pred             HHH--HHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH-
Confidence            445  89999999999999999999999999999999999999998876422111 26888899999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLEL  221 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el  221 (227)
                        +++|+||||||+||+++.++.+                       +||+.|+|||++.+..++.++|||||||++|||
T Consensus       187 --~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  264 (478)
T PTZ00267        187 --SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL  264 (478)
T ss_pred             --hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHH
Confidence              9999999999999999876532                       488899999999988899999999999999999


Q ss_pred             HhCCCC
Q 040292          222 LTGKKG  227 (227)
Q Consensus       222 ~tg~~p  227 (227)
                      ++|+.|
T Consensus       265 ~tg~~P  270 (478)
T PTZ00267        265 LTLHRP  270 (478)
T ss_pred             HhCCCC
Confidence            999887

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=222.89  Aligned_cols=144  Identities=19%  Similarity=0.241  Sum_probs=126.2

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.++++++||||+++++++.+.+..|+||||+++|+|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~~~~~  103 (377)
T cd05629          31 MKTLLKSEMFKKDQLAHVK--AERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYD-----TFSEDVT  103 (377)
T ss_pred             EEEEEHHHHHHhHHHHHHH--HHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            787754321     13455  89999999999999999999999999999999999999999987543     6788889


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------------------------  187 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------------------------  187 (227)
                      ..++.|++.||+|||   +.+++||||||+||+++.++.                                         
T Consensus       104 ~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (377)
T cd05629         104 RFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVA  180 (377)
T ss_pred             HHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccc
Confidence            999999999999999   999999999999999976532                                         


Q ss_pred             ---------------------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 ---------------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 ---------------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                                 .+||+.|+|||++....++.++|+|||||++|||++|..|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~P  247 (377)
T cd05629         181 VDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPP  247 (377)
T ss_pred             cccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCC
Confidence                                       2478889999999888899999999999999999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.6e-30  Score=204.50  Aligned_cols=130  Identities=28%  Similarity=0.464  Sum_probs=120.8

Q ss_pred             hHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           90 NCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        90 ~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      +|+.+|+++ .||||+++.+++..+...++|+|.|+.|.|.|++.+.-     .++++....++.|+..|++|||   .+
T Consensus        71 ~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~V-----tlSEK~tR~iMrqlfegVeylH---a~  142 (411)
T KOG0599|consen   71 QEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKV-----TLSEKETRRIMRQLFEGVEYLH---AR  142 (411)
T ss_pred             HHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhhe-----eecHHHHHHHHHHHHHHHHHHH---Hh
Confidence            899999999 89999999999999999999999999999999998764     7899999999999999999999   99


Q ss_pred             CeEEecCCCCceeecCCCce--------------------ecccCccccccccC------CCCCchhhHHHHHHHHHHHH
Q 040292          169 PIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT------GNCNEKSDVYSFGALLLELL  222 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~------~~~~~~~DvwS~G~il~el~  222 (227)
                      +|+||||||+|||++++..+                    ||||+|+|||.+..      ..|+...|.||.|+++|.++
T Consensus       143 ~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL  222 (411)
T KOG0599|consen  143 NIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL  222 (411)
T ss_pred             hhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence            99999999999999987543                    89999999998843      24788999999999999999


Q ss_pred             hCCCC
Q 040292          223 TGKKG  227 (227)
Q Consensus       223 tg~~p  227 (227)
                      .|.+|
T Consensus       223 aGcpP  227 (411)
T KOG0599|consen  223 AGCPP  227 (411)
T ss_pred             cCCCc
Confidence            99988

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.4e-30  Score=221.08  Aligned_cols=144  Identities=18%  Similarity=0.291  Sum_probs=127.5

Q ss_pred             eEEEcCCCC---c--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN---T--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~---~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....   .  ..+.  +|+.++..++||||+++++++..++..++||||+++|+|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----~l~~~~~  103 (364)
T cd05599          31 MKKLRKSEMLEKEQVAHVR--AERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKD-----TFTEEET  103 (364)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcC-----CCCHHHH
Confidence            888864321   1  3455  89999999999999999999999999999999999999999997643     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------------------  188 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------------------  188 (227)
                      ..++.|++.||+|||   +.+++||||||+||+++.++.+                                        
T Consensus       104 ~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (364)
T cd05599         104 RFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS  180 (364)
T ss_pred             HHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccccccccccccc
Confidence            999999999999999   9999999999999999875532                                        


Q ss_pred             -------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                         +||+.|+|||++....++.++|+|||||++|||++|..|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P  238 (364)
T cd05599         181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP  238 (364)
T ss_pred             ccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence                               378899999999888899999999999999999999987

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.4e-30  Score=211.60  Aligned_cols=168  Identities=21%  Similarity=0.271  Sum_probs=130.8

Q ss_pred             ccHHHH-HHhhcCCCCCC-eeecCCC----eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC---c--cee
Q 040292           50 FIALEL-EGATNNYDPGK-GFLQDHP----ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE---V--PIL  118 (227)
Q Consensus        50 ~~~~~l-~~~~~~f~~~~-~~~~~~~----vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~---~--~~l  118 (227)
                      .++.+. .-+++.|+.+. |++....    ||+...+..-.  .  +|+.+|+.+.|||||++.-+|....   .  ..|
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k--n--rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK--N--RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC--c--HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            444333 33567788776 6663332    88877654432  2  8999999999999999988876532   2  349


Q ss_pred             EeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------
Q 040292          119 VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------  188 (227)
Q Consensus       119 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------  188 (227)
                      |||||| -+|.++++...... +.++.-.+.-+.+|+++||.|||   ..+|+||||||+|+|+|.+...          
T Consensus       100 VleymP-~tL~~~~r~~~~~~-~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK  174 (364)
T KOG0658|consen  100 VLEYMP-ETLYRVIRHYTRAN-QRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAK  174 (364)
T ss_pred             HHHhch-HHHHHHHHHHhhcC-CCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence            999998 59999887421111 25777788899999999999999   9999999999999999987432          


Q ss_pred             -----------ecccCccccccccCCC-CCchhhHHHHHHHHHHHHhCCC
Q 040292          189 -----------IGTFGFIAPECITTGN-CNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       189 -----------~g~~~y~aPE~~~~~~-~~~~~DvwS~G~il~el~tg~~  226 (227)
                                 ..|..|.|||.+.+.. |+.+.||||.||++.||+-|++
T Consensus       175 ~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p  224 (364)
T KOG0658|consen  175 VLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP  224 (364)
T ss_pred             eeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence                       4677899999998875 8999999999999999999975

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=2.3e-30  Score=221.24  Aligned_cols=144  Identities=18%  Similarity=0.282  Sum_probs=126.3

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++++++||||+++++.+.+++..++||||+++|+|.+++....     .+++..+
T Consensus        31 iK~i~~~~~~~~~~~~~~~--~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~e~~~  103 (382)
T cd05625          31 MKTLRKKDVLLRNQVAHVK--AERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG-----IFPEDLA  103 (382)
T ss_pred             EEEEeHHHhhhHHHHHHHH--HHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            7777643211     3455  89999999999999999999999999999999999999999987543     5788888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------------------------  187 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------------------------  187 (227)
                      ..++.|++.||+|||   +.+|+||||||+||+++.++.                                         
T Consensus       104 ~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (382)
T cd05625         104 RFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDP  180 (382)
T ss_pred             HHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccccccccccccccccc
Confidence            999999999999999   999999999999999976432                                         


Q ss_pred             ---------------------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 ---------------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 ---------------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                                 .+||+.|+|||++.+..++.++||||+||++|||++|++|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~P  247 (382)
T cd05625         181 ANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPP  247 (382)
T ss_pred             ccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCC
Confidence                                       2478889999999988899999999999999999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=1.6e-30  Score=221.68  Aligned_cols=144  Identities=18%  Similarity=0.283  Sum_probs=126.4

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.+|++++||||+++++.+..++..++||||+++|+|.+++....     .+++..+
T Consensus        31 vK~~~~~~~~~~~~~~~~~--~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~-----~~~~~~~  103 (376)
T cd05598          31 MKTLRKADVLMRNQAAHVK--AERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLG-----IFEEDLA  103 (376)
T ss_pred             EEEEcHHHHHhhhhHHHHH--HHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            787754321     13455  89999999999999999999999999999999999999999997643     5788888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------------------------  187 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------------------------  187 (227)
                      ..++.|++.||+|||   +++|+||||||+||+++.++.                                         
T Consensus       104 ~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (376)
T cd05598         104 RFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEI  180 (376)
T ss_pred             HHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccccccccccccccccc
Confidence            899999999999999   999999999999999976542                                         


Q ss_pred             -----------------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 -----------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 -----------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                             .+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~P  243 (376)
T cd05598         181 DRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPP  243 (376)
T ss_pred             ccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCC
Confidence                                   2478899999999988899999999999999999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.96  E-value=6.6e-30  Score=199.94  Aligned_cols=145  Identities=23%  Similarity=0.292  Sum_probs=129.3

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||+++-....  -...+++||++|+.++|+||+.++++|-+.+..-||+|||+ .+|...+++...    .+...++..+
T Consensus        32 IKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i----~l~pa~iK~y  106 (318)
T KOG0659|consen   32 IKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNI----ILSPADIKSY  106 (318)
T ss_pred             EEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhccccc----ccCHHHHHHH
Confidence            8888765443  25557799999999999999999999999999999999998 699999987664    7888999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~~~  209 (227)
                      +.++++|++|||   .+.|+||||||.|+|++++|.+                     +-|.+|.|||.+.+.+ |+...
T Consensus       107 ~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~V  183 (318)
T KOG0659|consen  107 MLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGV  183 (318)
T ss_pred             HHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcc
Confidence            999999999999   9999999999999999988754                     4677899999998765 89999


Q ss_pred             hHHHHHHHHHHHHhCCC
Q 040292          210 DVYSFGALLLELLTGKK  226 (227)
Q Consensus       210 DvwS~G~il~el~tg~~  226 (227)
                      |+||.||++.||+-|.+
T Consensus       184 DmWavGCI~AELllr~P  200 (318)
T KOG0659|consen  184 DMWAVGCIFAELLLRVP  200 (318)
T ss_pred             hhhhHHHHHHHHHccCC
Confidence            99999999999998865

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.1e-30  Score=216.51  Aligned_cols=144  Identities=19%  Similarity=0.300  Sum_probs=128.0

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++.+++||||+++++++..++..|+||||+++|+|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----~l~~~~~  103 (333)
T cd05600          31 LKRMKKSLLFKLNEVRHVL--TERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLG-----VLSEDHA  103 (333)
T ss_pred             EEEEEHHHHhhhhHHHHHH--HHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC-----CCCHHHH
Confidence            7887643211     3455  89999999999999999999999999999999999999999997543     6788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                  .||+.|+|||++.+..++.++|
T Consensus       104 ~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (333)
T cd05600         104 RFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVD  180 (333)
T ss_pred             HHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccc
Confidence            999999999999999   9999999999999999876533                  5788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      ||||||++|||++|..|
T Consensus       181 vwslG~il~ell~g~~p  197 (333)
T cd05600         181 YWSLGCMLYEFLCGFPP  197 (333)
T ss_pred             eecchHHHhhhhhCCCC
Confidence            99999999999999987

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.96  E-value=2.4e-30  Score=216.53  Aligned_cols=144  Identities=18%  Similarity=0.297  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     ..+.  +|+.++..++||||+++++++...+..++||||+++|+|.+++....     .+++..+
T Consensus        25 ~K~~~~~~~~~~~~~~~~~--~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-----~l~~~~~   97 (325)
T cd05594          25 MKILKKEVIVAKDEVAHTL--TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRA   97 (325)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            7777643211     3444  89999999999999999999999999999999999999999887543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ..++.|++.||.|||   + .+++||||||+||+++.++.+                     .||+.|+|||++.+..++
T Consensus        98 ~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05594          98 RFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG  174 (325)
T ss_pred             HHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCC
Confidence            999999999999999   6 799999999999999876532                     478899999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|+|++|+.|
T Consensus       175 ~~~DiwslG~il~el~tG~~P  195 (325)
T cd05594         175 RAVDWWGLGVVMYEMMCGRLP  195 (325)
T ss_pred             CccccccccceeeeeccCCCC
Confidence            999999999999999999877

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=1.1e-29  Score=208.16  Aligned_cols=148  Identities=19%  Similarity=0.293  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  .|+.++++++||||+++.+++..+...++||||+++|+|.+++....... ..+++..+
T Consensus        23 vK~~~~~~~~~~~~~~~~~--~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~-~~l~~~~~   99 (280)
T cd05608          23 CKKLNKKRLKKRKGYEGAM--VEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEEN-PGFPEPRA   99 (280)
T ss_pred             EEeeeHHHHhhhHHHHHHH--HHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccC-CCCCHHHH
Confidence            7777543221     3445  89999999999999999999999999999999999999988875422111 26889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++++||||||+||++++++.+                     .|++.|+|||.+.+..++.
T Consensus       100 ~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  176 (280)
T cd05608         100 CFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDF  176 (280)
T ss_pred             HHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCc
Confidence            999999999999999   9999999999999999875432                     4678899999999889999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|||++|+.|
T Consensus       177 ~~DvwslG~il~el~~g~~p  196 (280)
T cd05608         177 SVDYFALGVTLYEMIAARGP  196 (280)
T ss_pred             cccHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.96  E-value=2.3e-29  Score=204.69  Aligned_cols=145  Identities=20%  Similarity=0.346  Sum_probs=125.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.++.....   ..|.  +|+..+++++||||++++|++..++..++||||+++|+|.+++.....    .+++..++.
T Consensus        38 ik~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~l~~~~~~~  111 (266)
T cd05064          38 IHTLRAGCSDKQRRGFL--AEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEG----QLVAGQLMG  111 (266)
T ss_pred             EEecCCCCCHHHHHHHH--HHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCC----CCCHHHHHH
Confidence            6777654332   3566  999999999999999999999999999999999999999999976432    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.||+|||   +.+++||||||+|++++.++.+                      .++..|+|||.+.+..++.+
T Consensus       112 ~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  188 (266)
T cd05064         112 MLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSA  188 (266)
T ss_pred             HHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccch
Confidence            9999999999999   9999999999999999876533                      13457999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +|||||||++||+++ |..|
T Consensus       189 ~Di~slG~~l~ell~~g~~p  208 (266)
T cd05064         189 SDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             hHHHHHHHHHHHHhcCCCCC
Confidence            999999999999775 8776

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.96  E-value=1.3e-29  Score=208.38  Aligned_cols=146  Identities=20%  Similarity=0.332  Sum_probs=126.0

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     ..+.  +|+.++++++|+||+++++++..++..++||||+++|+|.+++.....   ..+++..+
T Consensus        30 vK~~~~~~~~~~~~~~~~~--~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~---~~~~~~~~  104 (285)
T cd05631          30 CKKLEKKRIKKRKGEAMAL--NEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN---PGFDEQRA  104 (285)
T ss_pred             EEEeeHhhhhhhhhHHHHH--HHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCC---CCCCHHHH
Confidence            7777543221     2345  899999999999999999999999999999999999999888754321   15788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||+|||   +.+++||||||+||++++++.+                    .|++.|+|||++.+..++.+
T Consensus       105 ~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  181 (285)
T cd05631         105 IFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFS  181 (285)
T ss_pred             HHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcc
Confidence            999999999999999   9999999999999999875432                    47889999999998899999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|||||||++|+|++|+.|
T Consensus       182 ~DvwslGvil~el~~g~~p  200 (285)
T cd05631         182 PDWWGLGCLIYEMIQGQSP  200 (285)
T ss_pred             cCchhHHHHHHHHHhCCCC
Confidence            9999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-30  Score=222.33  Aligned_cols=145  Identities=26%  Similarity=0.440  Sum_probs=127.3

Q ss_pred             eEEEcCCC-Cc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-NT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||..+.+. ..    .+|.  +|+++|++++|||||++||++....+.++|||+|+||+|.++|.....    .++..++
T Consensus       191 vK~~k~~~~~~~~~~~e~m--~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~----~v~~~ek  264 (474)
T KOG0194|consen  191 VKTTKGSSELTKEQIKEFM--KEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKK----SLPTLEK  264 (474)
T ss_pred             EEeecccccccHHHHHHHH--HHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCC----CCCHHHH
Confidence            77776532 11    4666  999999999999999999999999999999999999999999998753    5889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.++|.||+|||   +++++||||..+|+|++.++.+                     .-...|+|||.+....|+.
T Consensus       265 ~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~  341 (474)
T KOG0194|consen  265 LRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSF  341 (474)
T ss_pred             HHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCcccc
Confidence            999999999999999   9999999999999999986542                     1235699999999999999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|||||||++||+.+ |..|
T Consensus       342 kTDV~sfGV~~~Eif~~g~~P  362 (474)
T KOG0194|consen  342 KTDVWSFGVLLWEIFENGAEP  362 (474)
T ss_pred             ccchhheeeeEEeeeccCCCC
Confidence            9999999999999988 5544

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=7.8e-30  Score=213.87  Aligned_cols=144  Identities=22%  Similarity=0.356  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++.....     +.+.  +|+.++.++ +||||+++++++...+..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~i~~~~~~~~~~~~~~~--~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-----~l~~~~   97 (329)
T cd05588          25 MKVIKKELVNDDEDIDWVQ--TEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQR-----KLPEEH   97 (329)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcC-----CCCHHH
Confidence            7887653221     3355  899999988 79999999999999999999999999999999886543     689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05588          98 ARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876432                     478889999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|+|++|+.|
T Consensus       175 ~~~DiwslG~~l~el~~g~~P  195 (329)
T cd05588         175 FSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             CccceechHHHHHHHHHCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=2.9e-29  Score=210.52  Aligned_cols=144  Identities=21%  Similarity=0.356  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++....     .+++..+..
T Consensus        35 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~  107 (331)
T cd06649          35 RKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK-----RIPEEILGK  107 (331)
T ss_pred             EEEeecccCHHHHHHHH--HHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcC-----CCCHHHHHH
Confidence            6666544322   3566  99999999999999999999999999999999999999999997643     578888999


Q ss_pred             HHHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.|++.||.|||   +. +++||||||+||+++.++.+                   .|++.|+|||++.+..++.++|
T Consensus       108 ~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~D  184 (331)
T cd06649         108 VSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD  184 (331)
T ss_pred             HHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHh
Confidence            9999999999999   64 69999999999999876543                   4788999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +|||||++|||++|+.|
T Consensus       185 iwslG~il~el~tg~~p  201 (331)
T cd06649         185 IWSMGLSLVELAIGRYP  201 (331)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999976

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=4.1e-30  Score=216.52  Aligned_cols=148  Identities=28%  Similarity=0.403  Sum_probs=130.1

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCc-ceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEV-PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+.-....  ..-.+++|+.++++++|||||.+++.|..++. .++||+||+||++.+.+....+   ..++++.+..
T Consensus        34 lK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~---~~f~E~~i~~  110 (426)
T KOG0589|consen   34 LKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKG---VLFPEERILK  110 (426)
T ss_pred             EEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhh---ccccHHHHHH
Confidence            7777655433  22245699999999999999999999999988 9999999999999999986542   3689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---------------------eecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---------------------LIGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---------------------~~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++.|++.|++|||   ++.|+|||||+.||+++.++.                     ++||+.|++||.+.+.+|+.|+
T Consensus       111 ~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KS  187 (426)
T KOG0589|consen  111 WFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKS  187 (426)
T ss_pred             HHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccC
Confidence            9999999999999   999999999999999987653                     3799999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||+||++|||++=+++
T Consensus       188 DiWsLGC~~yEm~~lk~a  205 (426)
T KOG0589|consen  188 DIWSLGCCLYEMCTLKPA  205 (426)
T ss_pred             cchhhcchHHHHHhcccc
Confidence            999999999999986653

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=7.6e-30  Score=213.39  Aligned_cols=144  Identities=21%  Similarity=0.327  Sum_probs=126.1

Q ss_pred             eEEEcCCCC----c--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN----T--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~----~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++....    .  ..+.  +|+.+|++++||||+++++++..++..|+||||+++++|.+++....     .+.+..
T Consensus        29 vK~~~~~~~~~~~~~~~~~~--~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~  101 (323)
T cd05584          29 MKVLKKATIVRNQKDTAHTK--AERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREG-----IFMEDT  101 (323)
T ss_pred             EEEEEHHHHHhhhhhHHHHH--HHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcC-----CCCHHH
Confidence            777764321    1  3445  89999999999999999999999999999999999999999987644     577888


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     .|++.|+|||++.+..++
T Consensus       102 ~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  178 (323)
T cd05584         102 ACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHG  178 (323)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCC
Confidence            8899999999999999   9999999999999999876532                     478889999999888889


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|||||||++|||++|+.|
T Consensus       179 ~~~DiwslG~il~ell~G~~p  199 (323)
T cd05584         179 KAVDWWSLGALMYDMLTGAPP  199 (323)
T ss_pred             CcceecccHHHHHHHhcCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-29  Score=231.57  Aligned_cols=146  Identities=24%  Similarity=0.498  Sum_probs=127.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCC--CcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQ--LEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~--~~~l~~~~~  148 (227)
                      ||.++.....   .+|.  +|..+|+.++|||||+++|+|.+....++++|||++|+|..+|++.....  ...+...+.
T Consensus       727 iK~l~~~~~~~~~~~Fl--~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dL  804 (1025)
T KOG1095|consen  727 VKSLKRLSSEQEVSDFL--KEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDL  804 (1025)
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHH
Confidence            7777766554   4677  99999999999999999999999999999999999999999998764322  236788899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-e----------------------cccCccccccccCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-I----------------------GTFGFIAPECITTGNC  205 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-~----------------------g~~~y~aPE~~~~~~~  205 (227)
                      +.++.|||+|++||+   +++++||||..+|+|++....+ +                      -...|||||.+.++.+
T Consensus       805 l~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iF  881 (1025)
T KOG1095|consen  805 LAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIF  881 (1025)
T ss_pred             HHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhccc
Confidence            999999999999999   9999999999999999976443 1                      1235999999999999


Q ss_pred             CchhhHHHHHHHHHHHHhC
Q 040292          206 NEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg  224 (227)
                      +.|+|||||||++||++|-
T Consensus       882 tskSDvWsFGVllWEifsl  900 (1025)
T KOG1095|consen  882 TSKSDVWSFGVLLWEIFSL  900 (1025)
T ss_pred             ccccchhhhHHHHHHHHhC
Confidence            9999999999999999984

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.96  E-value=1.4e-29  Score=212.16  Aligned_cols=144  Identities=24%  Similarity=0.355  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......     +.+.  +|+.++.++ +||||+.+++++...+..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~l~~~~   97 (327)
T cd05617          25 MKVVKKELVHDDEDIDWVQ--TEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQR-----KLPEEH   97 (327)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHH
Confidence            7777654221     3455  899999888 79999999999999999999999999999998886543     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (327)
T cd05617          98 ARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYG  174 (327)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|+|++|+.|
T Consensus       175 ~~~DiwslGvil~ell~g~~p  195 (327)
T cd05617         175 FSVDWWALGVLMFEMMAGRSP  195 (327)
T ss_pred             chheeehhHHHHHHHHhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.96  E-value=1.6e-29  Score=210.83  Aligned_cols=144  Identities=25%  Similarity=0.352  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++.....     +.+.  .|..++... +||||+++++++..++..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~-----~~~~~~   97 (316)
T cd05592          25 IKALKKDVVLEDDDVECTM--VERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSG-----RFDEAR   97 (316)
T ss_pred             EEEEEHHHhhhhhhHHHHH--HHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcC-----CCCHHH
Confidence            7877643211     2333  677777654 89999999999999999999999999999999987543     688889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05592          98 ARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYN  174 (316)
T ss_pred             HHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|||++|+.|
T Consensus       175 ~~~DvwslG~il~ell~G~~P  195 (316)
T cd05592         175 ESVDWWSFGVLLYEMLIGQSP  195 (316)
T ss_pred             CcccchhHHHHHHHHHhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-30  Score=216.83  Aligned_cols=144  Identities=22%  Similarity=0.379  Sum_probs=125.7

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-CcccceeEEEEeeCC-cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-HKNILKFVGCCLETE-VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||+|+..... ++..-+||++.|++++ |||||++.+++.+.+ .+++|||||+ -+|+++++.++.    ++++..++.
T Consensus        40 IK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r----~fse~~irn  114 (538)
T KOG0661|consen   40 IKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNR----LFSESDIRN  114 (538)
T ss_pred             HHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCC----cCCHHHHHH
Confidence            8888877655 4444459999999998 999999999998887 8999999997 599999998753    899999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC-CCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG-NCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~-~~~~~~  209 (227)
                      |+.||++||+|+|   .+++.|||+||+|||+..+..+                    +.|.+|.|||++... .|+.+.
T Consensus       115 im~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pv  191 (538)
T KOG0661|consen  115 IMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPV  191 (538)
T ss_pred             HHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCch
Confidence            9999999999999   9999999999999999843322                    688899999999754 589999


Q ss_pred             hHHHHHHHHHHHHhCC
Q 040292          210 DVYSFGALLLELLTGK  225 (227)
Q Consensus       210 DvwS~G~il~el~tg~  225 (227)
                      |+||+||+++|+.+=+
T Consensus       192 D~wA~GcI~aEl~sLr  207 (538)
T KOG0661|consen  192 DMWAVGCIMAELYSLR  207 (538)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999997643

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=3.1e-29  Score=210.67  Aligned_cols=149  Identities=21%  Similarity=0.423  Sum_probs=122.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCC-cceeEeecccCCChhhhhcCCCCC----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETE-VPILVFEFVACGTLADRIHDPNGS----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~----------  138 (227)
                      ||.+......   +.+.  +|+.++.++ +||||++++++|...+ ..++||||+++|+|.+++......          
T Consensus        42 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~  119 (338)
T cd05102          42 VKMLKEGATASEHKALM--SELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPK  119 (338)
T ss_pred             eeccccccchHHHHHHH--HHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchh
Confidence            8888654332   3455  999999999 9999999999987654 578999999999999988643210          


Q ss_pred             -----------------------------------------------CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeE
Q 040292          139 -----------------------------------------------QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIV  171 (227)
Q Consensus       139 -----------------------------------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~  171 (227)
                                                                     ...++++..+..++.|++.||.|||   +++++
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iv  196 (338)
T cd05102         120 QRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCI  196 (338)
T ss_pred             hhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEE
Confidence                                                           0125778888999999999999999   99999


Q ss_pred             EecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          172 FRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       172 H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ||||||+||+++.++.+                       .+++.|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       197 HrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~p  276 (338)
T cd05102         197 HRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP  276 (338)
T ss_pred             CCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCC
Confidence            99999999999875532                       13457999999988889999999999999999997 8765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.96  E-value=1.2e-29  Score=212.76  Aligned_cols=144  Identities=22%  Similarity=0.361  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.++.....     +.+.  +|+.++.++ +||||+++++++..++..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~-----~l~~~~   97 (329)
T cd05618          25 MKVVKKELVNDDEDIDWVQ--TEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEH   97 (329)
T ss_pred             EEEEEhhHhcchhHHHHHH--HHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcC-----CCCHHH
Confidence            7777654221     2344  888888777 89999999999999999999999999999998886543     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     .||+.|+|||++.+..++
T Consensus        98 ~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05618          98 ARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|+|++|+.|
T Consensus       175 ~~~DiwslG~il~el~~g~~P  195 (329)
T cd05618         175 FSVDWWALGVLMFEMMAGRSP  195 (329)
T ss_pred             CccceecccHHHHHHhhCCCC
Confidence            999999999999999999887

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.96  E-value=1.2e-29  Score=212.04  Aligned_cols=144  Identities=20%  Similarity=0.313  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......     +.+.  .|..++..+ +||||+++++++..++..|+||||+++|+|.+.+....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~-----~~~~~~   97 (321)
T cd05591          25 IKVLKKDVILQDDDVDCTM--TEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSR-----KFDEPR   97 (321)
T ss_pred             EEEEeHHHhhhhhHHHHHH--HHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcC-----CCCHHH
Confidence            7887653211     2344  788888866 89999999999999999999999999999999887543     678889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     .|++.|+|||++....++
T Consensus        98 ~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (321)
T cd05591          98 SRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYG  174 (321)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876533                     478899999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|+|++|+.|
T Consensus       175 ~~~DvwslG~il~el~tg~~P  195 (321)
T cd05591         175 PSVDWWALGVLMYEMMAGQPP  195 (321)
T ss_pred             CccceechhHHHHHHhcCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.96  E-value=5.6e-30  Score=241.67  Aligned_cols=142  Identities=30%  Similarity=0.499  Sum_probs=124.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      ||++.....  ...  .|++.+++++|||||+++|+|.+++..++||||+++|+|.+++.        .++|..+..++.
T Consensus       720 vK~~~~~~~--~~~--~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~  787 (968)
T PLN00113        720 VKEINDVNS--IPS--SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR--------NLSWERRRKIAI  787 (968)
T ss_pred             EEEccCCcc--ccH--HHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh--------cCCHHHHHHHHH
Confidence            776654322  223  67999999999999999999999999999999999999999995        478899999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------ecccCccccccccCCCCCchhhHHHHHHH
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------IGTFGFIAPECITTGNCNEKSDVYSFGAL  217 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~i  217 (227)
                      |++.||+|||+.++++++|||+||+||+++.++..                .+++.|+|||++.+..++.++|||||||+
T Consensus       788 ~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvv  867 (968)
T PLN00113        788 GIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLI  867 (968)
T ss_pred             HHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCCCCCcccchhhHHHH
Confidence            99999999997777899999999999999875432                35688999999998889999999999999


Q ss_pred             HHHHHhCCCC
Q 040292          218 LLELLTGKKG  227 (227)
Q Consensus       218 l~el~tg~~p  227 (227)
                      +|||+||+.|
T Consensus       868 l~el~tg~~p  877 (968)
T PLN00113        868 LIELLTGKSP  877 (968)
T ss_pred             HHHHHhCCCC
Confidence            9999999987

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=2.8e-29  Score=209.44  Aligned_cols=144  Identities=26%  Similarity=0.354  Sum_probs=124.4

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++....     .+.+.  .|..++... +||||+++++++...+..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~   97 (316)
T cd05619          25 IKALKKDVVLMDDDVECTM--VEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCH-----KFDLPR   97 (316)
T ss_pred             EEEEEHHHhhhcchHHHHH--HHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHH
Confidence            787765421     12344  778888764 99999999999999999999999999999999997543     578889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     .||+.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05619          98 ATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYN  174 (316)
T ss_pred             HHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876432                     478899999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|||++|+.|
T Consensus       175 ~~~DvwslG~il~el~~G~~p  195 (316)
T cd05619         175 TSVDWWSFGVLLYEMLIGQSP  195 (316)
T ss_pred             chhhhhhHHHHHHHHHhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.96  E-value=8.3e-29  Score=200.96  Aligned_cols=148  Identities=20%  Similarity=0.344  Sum_probs=127.3

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcc-cceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKN-ILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~n-iv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      +|+++-....  -...+++|+.+|++++|+| |+++++++...+      ..++|+||+. -+|..++...+..+ +.++
T Consensus        41 LKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~-~g~~  118 (323)
T KOG0594|consen   41 LKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKP-QGLP  118 (323)
T ss_pred             EEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccc-cCCC
Confidence            8888766553  2333569999999999999 999999998877      7889999996 69999998765322 2466


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~  203 (227)
                      ...+..++.|++.||+|||   +++|+||||||+|+++++++.+                     ++|.+|.|||++.+.
T Consensus       119 ~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  119 PRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCC
Confidence            6789999999999999999   9999999999999999998754                     688899999999887


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCC
Q 040292          204 -NCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       204 -~~~~~~DvwS~G~il~el~tg~~  226 (227)
                       .|+...|+||+||++.||+++++
T Consensus       196 ~~Ys~~vDiWs~GcIfaEm~~~~~  219 (323)
T KOG0594|consen  196 TSYSTSVDIWSLGCIFAEMFTRRP  219 (323)
T ss_pred             CcCCCCcchHhHHHHHHHHHhCCC
Confidence             58999999999999999999764

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=2.2e-29  Score=207.27  Aligned_cols=144  Identities=19%  Similarity=0.353  Sum_probs=122.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.++.....   ..+.  +|+.++++++||||+++++++..++..++||||++ ++|.+++.....    .+++..+..
T Consensus        35 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~~~~~~~~~  107 (288)
T cd07871          35 LKEIRLEHEEGAPCTAI--REVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYLDNCGN----LMSMHNVKI  107 (288)
T ss_pred             EEEecccccCCcchhHH--HHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCHHHHHHhcCC----CCCHHHHHH
Confidence            7777644322   3445  99999999999999999999999889999999997 599998865432    578889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~~  208 (227)
                      ++.|++.||+|||   +++++||||||+||+++.++.+                     .+++.|+|||.+.+ ..++.+
T Consensus       108 ~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  184 (288)
T cd07871         108 FMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTP  184 (288)
T ss_pred             HHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcH
Confidence            9999999999999   9999999999999999876532                     46778999998865 458999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+||++|+|++|++|
T Consensus       185 ~DiwslG~~l~~l~~g~~p  203 (288)
T cd07871         185 IDMWGVGCILYEMATGRPM  203 (288)
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=3.4e-30  Score=219.45  Aligned_cols=143  Identities=18%  Similarity=0.312  Sum_probs=123.2

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+.....     .+.+.  +|+.+++.++||||+++++++..++..|+||||+++|+|.+++...      .+++..+
T Consensus        73 iK~~~~~~~~~~~~~~~~~--~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~------~~~~~~~  144 (370)
T cd05621          73 MKLLSKFEMIKRSDSAFFW--EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY------DVPEKWA  144 (370)
T ss_pred             EEEEEHHHhhhhhhHHHHH--HHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc------CCCHHHH
Confidence            777653211     13455  8999999999999999999999999999999999999999998643      4678889


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCC---
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTG---  203 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~---  203 (227)
                      ..++.|++.||+|||   +++|+||||||+||++++++.+                      +||+.|+|||++...   
T Consensus       145 ~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~  221 (370)
T cd05621         145 KFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGD  221 (370)
T ss_pred             HHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCC
Confidence            999999999999999   9999999999999999876432                      488999999998653   


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 -NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 -~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .++.++|+||+||++|||++|+.|
T Consensus       222 ~~~~~~~DiwSlG~ilyell~G~~P  246 (370)
T cd05621         222 GYYGRECDWWSVGVFLFEMLVGDTP  246 (370)
T ss_pred             CCCCcccCEEeehHHHHHHHhCCCC
Confidence             378899999999999999999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=3e-29  Score=206.56  Aligned_cols=148  Identities=24%  Similarity=0.341  Sum_probs=129.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.-++..|-++|+.++||.++.||..+..+...||+||||+||+|..+.+.+.+   ..+++..++.
T Consensus       107 mKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~---~~fse~~aRF  183 (459)
T KOG0610|consen  107 MKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPG---KRFSESAARF  183 (459)
T ss_pred             EEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCC---CccchhhHHH
Confidence            8888765432   222233788899999999999999999999999999999999999998876543   3689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------------------
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------------------  188 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------------------  188 (227)
                      ++..++-||+|||   -.+|+.|||||+|||+-++|.+                                          
T Consensus       184 YaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~  260 (459)
T KOG0610|consen  184 YAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSP  260 (459)
T ss_pred             HHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCccccccccccccc
Confidence            9999999999999   9999999999999998765432                                          


Q ss_pred             -----------------------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -----------------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -----------------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                                         +||-.|.|||++.+..++..+|.|+|||++|||+.|..|
T Consensus       261 r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TP  334 (459)
T KOG0610|consen  261 RCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTP  334 (459)
T ss_pred             chhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                                               588889999999999999999999999999999999987

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=5e-30  Score=218.48  Aligned_cols=132  Identities=20%  Similarity=0.330  Sum_probs=118.0

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.+++.++||||+++++.+..++..++||||+++|+|.+++...      .+++..+..++.|++.||.||| 
T Consensus        89 ~~~--~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH-  159 (371)
T cd05622          89 FFW--EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIH-  159 (371)
T ss_pred             HHH--HHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHH-
Confidence            455  8999999999999999999999999999999999999999998643      4678888899999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCC----CCCchhhHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTG----NCNEKSDVYSFGALL  218 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~----~~~~~~DvwS~G~il  218 (227)
                        +++|+||||||+||+++.++.+                      +||+.|+|||++...    .++.++|+|||||++
T Consensus       160 --~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil  237 (371)
T cd05622         160 --SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL  237 (371)
T ss_pred             --HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHH
Confidence              9999999999999999876532                      488899999998653    378899999999999


Q ss_pred             HHHHhCCCC
Q 040292          219 LELLTGKKG  227 (227)
Q Consensus       219 ~el~tg~~p  227 (227)
                      |||++|+.|
T Consensus       238 yell~G~~P  246 (371)
T cd05622         238 YEMLVGDTP  246 (371)
T ss_pred             HHHHhCCCC
Confidence            999999987

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.96  E-value=6.5e-29  Score=199.93  Aligned_cols=145  Identities=21%  Similarity=0.339  Sum_probs=125.2

Q ss_pred             eEEEcCCCCcccc--cchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNTEEY--YCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~~~~--~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|+++.+...+-|  ..++||.+|.+++|||||.+..+....  +..|+|||||++ +|..++..-.    +++...+..
T Consensus       106 LKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~----q~F~~~evK  180 (419)
T KOG0663|consen  106 LKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMK----QPFLPGEVK  180 (419)
T ss_pred             eeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhcc----CCCchHHHH
Confidence            7777766544333  245999999999999999999988754  468999999984 9999887654    489999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~  207 (227)
                      .++.|+++|++|||   .+-|+||||||+|+|++..|.+                     +-|.+|.|||.+.+.+ |+.
T Consensus       181 ~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst  257 (419)
T KOG0663|consen  181 TLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYST  257 (419)
T ss_pred             HHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCc
Confidence            99999999999999   9999999999999999987643                     5678999999999875 899


Q ss_pred             hhhHHHHHHHHHHHHhCCC
Q 040292          208 KSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~  226 (227)
                      ..|+||+|||+.|++++++
T Consensus       258 ~iDMWSvGCI~aE~l~~kP  276 (419)
T KOG0663|consen  258 AVDMWSVGCIFAELLTQKP  276 (419)
T ss_pred             chhhhhHHHHHHHHHhcCC
Confidence            9999999999999999875

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.96  E-value=5.4e-29  Score=208.45  Aligned_cols=146  Identities=19%  Similarity=0.269  Sum_probs=123.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.+++.++||||++++++|..++..++||||+++|+|.+++.....   ..+++..+.
T Consensus        30 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~l~~~~~~  104 (327)
T cd08227          30 VRRINLEACTNEMVTFLQ--GELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM---DGMSELAIA  104 (327)
T ss_pred             EEEechhhccHHHHHHHH--HHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhcc---CCCCHHHHH
Confidence            8887654332    3445  899999999999999999999999999999999999999999865321   157888999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------ecccCcccccccc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------~g~~~y~aPE~~~  201 (227)
                      .++.|++.||+|||   +.+++||||||+||+++.++.+                            .++..|+|||++.
T Consensus       105 ~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (327)
T cd08227         105 YILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQ  181 (327)
T ss_pred             HHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhh
Confidence            99999999999999   9999999999999999865432                            2345699999997


Q ss_pred             C--CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 T--GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~--~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .  ..++.++|||||||++|||++|+.|
T Consensus       182 ~~~~~~~~~~DiwslG~il~el~~g~~p  209 (327)
T cd08227         182 QNLQGYDAKSDIYSVGITACELANGHVP  209 (327)
T ss_pred             cccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            6  3588999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=4.8e-30  Score=217.60  Aligned_cols=144  Identities=18%  Similarity=0.244  Sum_probs=126.7

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++....     .+.+.  +|+.++.+++||||+++++.+..++..++||||+++|+|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~l~~~~~  103 (360)
T cd05627          31 MKILRKADMLEKEQVAHIR--AERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKD-----TLSEEAT  103 (360)
T ss_pred             EEEEEHHHHhhhhhHHHHH--HHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcC-----CCCHHHH
Confidence            787764321     13455  89999999999999999999999999999999999999999997654     6888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------------------------  187 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------------------------  187 (227)
                      ..++.|++.||+|||   +++++||||||+||+++.++.                                         
T Consensus       104 ~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (360)
T cd05627         104 QFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKR  180 (360)
T ss_pred             HHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccccccccccccc
Confidence            999999999999999   999999999999999976542                                         


Q ss_pred             ---------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 ---------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 ---------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                     .+||+.|+|||++.+..++.++|+|||||++|||++|+.|
T Consensus       181 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P  235 (360)
T cd05627         181 KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP  235 (360)
T ss_pred             ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence                           1478889999999988899999999999999999999987

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.96  E-value=2.6e-29  Score=209.93  Aligned_cols=144  Identities=24%  Similarity=0.346  Sum_probs=125.4

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+.....     .+.+.  +|+.++..+ +||||+++++++...+..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~-----~l~~~~   97 (320)
T cd05590          25 VKVLKKDVILQDDDVECTM--TEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSR-----RFDEAR   97 (320)
T ss_pred             EEEEEHHHHhhccHHHHHH--HHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcC-----CCCHHH
Confidence            787764321     13444  788888876 79999999999999999999999999999999887543     688899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||++++++.+                     .||+.|+|||.+.+..++
T Consensus        98 ~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (320)
T cd05590          98 ARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYG  174 (320)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|+|++|+.|
T Consensus       175 ~~~DiwslG~il~el~~g~~P  195 (320)
T cd05590         175 PSVDWWAMGVLLYEMLCGHAP  195 (320)
T ss_pred             CccchhhhHHHHHHHhhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=6.9e-30  Score=197.12  Aligned_cols=146  Identities=23%  Similarity=0.393  Sum_probs=130.2

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+-.+...     .++.  +|+++-+.|+||||+++|++|.+....||++||.++|++...|.....   ..+++...
T Consensus        52 lKVlfKsqi~~~~v~~qlr--REiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~---~~f~e~~~  126 (281)
T KOG0580|consen   52 LKVLFKSQILKTQVEHQLR--REIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRM---KRFDEQRA  126 (281)
T ss_pred             EeeeeHHHHHHhcchhhhh--heeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhccc---ccccccch
Confidence            7776544322     4566  999999999999999999999999999999999999999999985432   25788888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-------------------eecccCccccccccCCCCCchh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-------------------LIGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-------------------~~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ..++.|+|.||.|+|   .++++||||||+|+|++.++.                   ++||.-|.+||...+..++...
T Consensus       127 a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~V  203 (281)
T KOG0580|consen  127 ATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFV  203 (281)
T ss_pred             hHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchh
Confidence            999999999999999   999999999999999987653                   3899999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+|++|+++||++.|.+|
T Consensus       204 d~w~lgvl~yeflvg~pp  221 (281)
T KOG0580|consen  204 DLWSLGVLCYEFLVGLPP  221 (281)
T ss_pred             hHHHHHHHHHHHHhcCCc
Confidence            999999999999999988

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=6.1e-29  Score=208.85  Aligned_cols=144  Identities=19%  Similarity=0.340  Sum_probs=125.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|++++++++||||++++++|..++..++||||+++|+|.+++....     .+++.....
T Consensus        35 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~  107 (333)
T cd06650          35 RKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-----RIPEQILGK  107 (333)
T ss_pred             EEEeecccCHHHHHHHH--HHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcC-----CCCHHHHHH
Confidence            5665544322   3566  99999999999999999999999999999999999999999997543     578888899


Q ss_pred             HHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.|++.||.|||   + .+++|+||||+||++++++.+                   .|+..|+|||++.+..++.++|
T Consensus       108 ~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  184 (333)
T cd06650         108 VSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD  184 (333)
T ss_pred             HHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHH
Confidence            9999999999999   6 479999999999999876532                   4778899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +|||||++|+|++|+.|
T Consensus       185 vwslG~il~~l~~g~~p  201 (333)
T cd06650         185 IWSMGLSLVEMAIGRYP  201 (333)
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            99999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=8.8e-29  Score=204.95  Aligned_cols=146  Identities=18%  Similarity=0.348  Sum_probs=122.8

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... ....+.+|+.++++++||||+++++++..+...++||||+. ++|.+++.....    .+++..+..++
T Consensus        35 iK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~  109 (303)
T cd07869          35 LKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPG----GLHPENVKLFL  109 (303)
T ss_pred             EEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCC----CCCHHHHHHHH
Confidence            8887654332 22233399999999999999999999999999999999996 688888765432    57888899999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~~~D  210 (227)
                      .|++.||+|||   +.+++||||||+||++++++.+                     .+++.|+|||.+.+. .++.++|
T Consensus       110 ~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  186 (303)
T cd07869         110 FQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLD  186 (303)
T ss_pred             HHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHH
Confidence            99999999999   9999999999999999876533                     357789999998654 5788999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||+||++|+|++|+.|
T Consensus       187 iwslG~il~~l~~g~~p  203 (303)
T cd07869         187 MWGVGCIFVEMIQGVAA  203 (303)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.96  E-value=4.2e-29  Score=208.33  Aligned_cols=144  Identities=24%  Similarity=0.334  Sum_probs=124.4

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++....     .+.+.  .|..++... +||||+++++++...+..|+||||+++|+|.+++....     .+++..
T Consensus        25 vK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~-----~~~~~~   97 (316)
T cd05620          25 VKALKKDVVLIDDDVECTM--VEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKG-----RFDLYR   97 (316)
T ss_pred             EEEEEHHHhhhcchHHHHH--HHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcC-----CCCHHH
Confidence            787765321     12334  788777755 99999999999999999999999999999999887643     678889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (316)
T cd05620          98 ATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYT  174 (316)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|||++|+.|
T Consensus       175 ~~~DiwslGvil~el~~g~~P  195 (316)
T cd05620         175 FSVDWWSFGVLLYEMLIGQSP  195 (316)
T ss_pred             cccchhhhHHHHHHHHhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=3.5e-29  Score=208.97  Aligned_cols=144  Identities=23%  Similarity=0.353  Sum_probs=125.9

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++....     ...+.  +|+.++..+ +||||+++++++...+..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~l~~~~   97 (318)
T cd05570          25 VKVLKKDVILQDDDVECTM--TEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSG-----RFDEPR   97 (318)
T ss_pred             EEEEEHHHHhhhhHHHHHH--HHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC-----CCCHHH
Confidence            788764321     13344  888888888 79999999999999999999999999999999887643     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +.+++||||||+||++++++.+                     +|++.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  174 (318)
T cd05570          98 ARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYG  174 (318)
T ss_pred             HHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478889999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|+|++|+.|
T Consensus       175 ~~~DiwslGvil~~l~~G~~p  195 (318)
T cd05570         175 PAVDWWALGVLLYEMLAGQSP  195 (318)
T ss_pred             cchhhhhHHHHHHHHhhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=4.1e-29  Score=205.05  Aligned_cols=144  Identities=25%  Similarity=0.330  Sum_probs=123.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||++......    +.+.  +|+.++++++||||+++++++...+..++||||++++.+..+.....     .+++..+.
T Consensus        31 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~  103 (287)
T cd07848          31 IKKFKDSEENEEVKETTL--RELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPN-----GVPPEKVR  103 (287)
T ss_pred             EEEEecccccccchhhHH--HHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCC-----CCCHHHHH
Confidence            8887654332    3455  89999999999999999999999999999999999876665543322     57888999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                      .|++.|+|||++.+..++.
T Consensus       104 ~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (287)
T cd07848         104 SYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGK  180 (287)
T ss_pred             HHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCC
Confidence            99999999999999   9999999999999999876532                      4678899999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+||++|||++|++|
T Consensus       181 ~~DiwslGvil~el~~g~~p  200 (287)
T cd07848         181 AVDMWSVGCILGELSDGQPL  200 (287)
T ss_pred             chhHHhHHHHHHHHHhCCCC
Confidence            99999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=4.6e-30  Score=214.14  Aligned_cols=144  Identities=24%  Similarity=0.347  Sum_probs=126.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++..++..|+||||+++|+|.+++....     .+++..+.
T Consensus        29 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~  101 (318)
T cd05582          29 MKVLKKATLKVRDRVRTK--MERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-----MFTEEDVK  101 (318)
T ss_pred             EEEEEHHHhhhhhHHHHH--HHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-----CCCHHHHH
Confidence            7777643221    2344  89999999999999999999999999999999999999999986543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                     .|++.|+|||.+....++.+
T Consensus       102 ~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  178 (318)
T cd05582         102 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS  178 (318)
T ss_pred             HHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCc
Confidence            99999999999999   9999999999999999876533                     47788999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+|||||++|||++|+.|
T Consensus       179 ~DiwslG~il~el~tg~~p  197 (318)
T cd05582         179 ADWWSFGVLMFEMLTGSLP  197 (318)
T ss_pred             cceeccceEeeeeccCCCC
Confidence            9999999999999999876

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=9.2e-29  Score=202.45  Aligned_cols=132  Identities=21%  Similarity=0.330  Sum_probs=118.9

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      .|+.++++++||||+++.+++..+...++||||+++++|.+++.....   ..+++..+..++.|++.||+|||   +.+
T Consensus        42 ~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~  115 (277)
T cd05607          42 LEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGE---RGLEMERVIHYSAQITCGILHLH---SMD  115 (277)
T ss_pred             HHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            799999999999999999999999999999999999999988864321   25788888999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||||+||++++++.+                    .|+..|+|||++.+..++.++|+||+||++|||++|+.|
T Consensus       116 ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p  193 (277)
T cd05607         116 IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTP  193 (277)
T ss_pred             EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCC
Confidence            9999999999999876532                    467889999999888899999999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-29  Score=216.96  Aligned_cols=168  Identities=26%  Similarity=0.449  Sum_probs=141.8

Q ss_pred             ccHHHHHHh----hcCCCCCC-eeecCCC-eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeE
Q 040292           50 FIALELEGA----TNNYDPGK-GFLQDHP-ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILV  119 (227)
Q Consensus        50 ~~~~~l~~~----~~~f~~~~-~~~~~~~-vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV  119 (227)
                      +.++|+.-+    ++.|..++ |.+.|.+ ||.++-....    +.|.  +|+.++++-+|.||+=+.|+|...+. .+|
T Consensus       389 Ip~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFK--nEVa~lkkTRH~NIlLFMG~~~~p~~-AIi  465 (678)
T KOG0193|consen  389 IPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFK--NEVAVLKKTRHENILLFMGACMNPPL-AII  465 (678)
T ss_pred             cCHHHhhccceeccccccceeecccccceEEEEEecCCCCHHHHHHHH--HHHHHHhhcchhhheeeehhhcCCce-eee
Confidence            455555444    44455544 8888888 9999876554    5777  99999999999999999999988776 899


Q ss_pred             eecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------
Q 040292          120 FEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------  188 (227)
Q Consensus       120 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------  188 (227)
                      +-+|+|.+|+.+++-..    ..+.....+.|+.|+++|+.|||   .++|+|||||..||++.+++.+           
T Consensus       466 TqwCeGsSLY~hlHv~e----tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk  538 (678)
T KOG0193|consen  466 TQWCEGSSLYTHLHVQE----TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK  538 (678)
T ss_pred             ehhccCchhhhhccchh----hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeee
Confidence            99999999999998654    27888999999999999999999   9999999999999999986654           


Q ss_pred             ------------ecccCccccccccC---CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ------------IGTFGFIAPECITT---GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ------------~g~~~y~aPE~~~~---~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                  .|..-|||||++..   ..|+..+||||||+++|||+||..|
T Consensus       539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lP  592 (678)
T KOG0193|consen  539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELP  592 (678)
T ss_pred             eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCC
Confidence                        24455999999953   3589999999999999999999876

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=6.2e-29  Score=207.90  Aligned_cols=144  Identities=26%  Similarity=0.370  Sum_probs=124.3

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCc-ccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHK-NILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~-niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+.....     .+.+.  .|+.++..++|+ +|+.+++++...+..|+||||+++|+|.+++....     .+++..
T Consensus        30 vK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~-----~~~~~~  102 (324)
T cd05587          30 IKILKKDVIIQDDDVECTM--VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-----KFKEPH  102 (324)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-----CCCHHH
Confidence            888764321     13455  889999999665 58889999998899999999999999999987543     578889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       103 ~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  179 (324)
T cd05587         103 AVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYG  179 (324)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|+|+||+.|
T Consensus       180 ~~~DiwslGvil~elltG~~p  200 (324)
T cd05587         180 KSVDWWAFGVLLYEMLAGQPP  200 (324)
T ss_pred             cccchhhhHHHHHHHHhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.96  E-value=1.5e-28  Score=198.51  Aligned_cols=145  Identities=22%  Similarity=0.420  Sum_probs=125.4

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +++.  +|+.++++++||||+++++++...+..++||||+++|+|.+++.....    .+++..+..++
T Consensus        33 ~K~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~  106 (256)
T cd05114          33 IKAINEGAMSEEDFI--EEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQG----KLSKDMLLSMC  106 (256)
T ss_pred             EEecccCCccHHHHH--HHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCcc----CCCHHHHHHHH
Confidence            7776644333 5677  999999999999999999999999999999999999999999875432    57889999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +++++|+||+|+|+++++++.+                      .++..|+|||.+....++.++|
T Consensus       107 ~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (256)
T cd05114         107 QDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhh
Confidence            99999999999   9999999999999999876532                      1234699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|||++ |+.|
T Consensus       184 i~s~G~~l~el~~~g~~p  201 (256)
T cd05114         184 VWSFGVLMWEVFTEGKMP  201 (256)
T ss_pred             hHHHHHHHHHHHcCCCCC
Confidence            9999999999999 7765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=6e-29  Score=208.58  Aligned_cols=143  Identities=24%  Similarity=0.368  Sum_probs=120.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||++......    ..+.  +|+.++++++||||+++++++....     ..|+||||+. ++|.+++....     .++
T Consensus        30 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-----~~~  101 (338)
T cd07859          30 IKKINDVFEHVSDATRIL--REIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKAND-----DLT  101 (338)
T ss_pred             EEEechhhccchhHHHHH--HHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcc-----cCC
Confidence            8887643221    3455  9999999999999999999886533     4789999995 68999887543     688


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECI  200 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~  200 (227)
                      +..+..++.|++.||.|||   +.+++||||||+||+++.++.+                        +|++.|+|||++
T Consensus       102 ~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  178 (338)
T cd07859         102 PEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC  178 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHH
Confidence            9999999999999999999   9999999999999999876532                        467789999998


Q ss_pred             cC--CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TT--GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~--~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..  ..++.++|||||||++|||++|++|
T Consensus       179 ~~~~~~~~~~~DvwSlGvvl~el~tg~~p  207 (338)
T cd07859         179 GSFFSKYTPAIDIWSIGCIFAEVLTGKPL  207 (338)
T ss_pred             hccccccCchhHHHHHHHHHHHHHcCCCC
Confidence            65  5689999999999999999999876

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.96  E-value=2.2e-29  Score=214.46  Aligned_cols=143  Identities=19%  Similarity=0.310  Sum_probs=123.1

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+.....     ...+.  +|+.+++.++||||+++++++..++..++||||+++|+|.+++...      .+++..+
T Consensus        73 iK~~~~~~~~~~~~~~~~~--~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~------~l~~~~~  144 (370)
T cd05596          73 MKLLSKFEMIKRSDSAFFW--EERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNY------DIPEKWA  144 (370)
T ss_pred             EEEEEHHHhhhhhhHHHHH--HHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhc------CCCHHHH
Confidence            787754221     13355  8999999999999999999999999999999999999999998643      4678888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCC---
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTG---  203 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~---  203 (227)
                      ..++.|++.||+|||   +++++||||||+||+++.++.+                      +||+.|+|||.+...   
T Consensus       145 ~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  221 (370)
T cd05596         145 RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGD  221 (370)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCC
Confidence            899999999999999   9999999999999999876532                      478899999998653   


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 -NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 -~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .++.++|+|||||++|||++|+.|
T Consensus       222 ~~~~~~~DiwSlGvilyelltG~~P  246 (370)
T cd05596         222 GYYGRECDWWSVGVFLYEMLVGDTP  246 (370)
T ss_pred             CCCCCceeeeehhHHHHHHHhCCCC
Confidence             378899999999999999999987

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.4e-30  Score=220.26  Aligned_cols=144  Identities=26%  Similarity=0.435  Sum_probs=127.3

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||++.-+.++     +++.  +|+..|.+++|||+|.+.|+|..+...|||||||- ||-.|++.-..    +|+.+-++
T Consensus        56 IKKMsySGKQs~EKWqDIl--KEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhk----KplqEvEI  128 (948)
T KOG0577|consen   56 IKKMSYSGKQSNEKWQDIL--KEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEI  128 (948)
T ss_pred             eeeccccccccHHHHHHHH--HHHHHHHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHh----ccchHHHH
Confidence            8998876665     4566  99999999999999999999999999999999996 57666665333    27888899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCcccccccc---CCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECIT---TGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~---~~~~~~~  208 (227)
                      ..|..+.++||.|||   +.+.+|||||..|||+++.+.+                 +|||+|||||++.   .+.|+-+
T Consensus       129 AAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgk  205 (948)
T KOG0577|consen  129 AAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK  205 (948)
T ss_pred             HHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccccchhHheeccccccCCc
Confidence            999999999999999   9999999999999999987644                 7999999999995   3569999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+|+++.|+..+++|
T Consensus       206 vDvWSLGITCIELAERkPP  224 (948)
T KOG0577|consen  206 VDVWSLGITCIELAERKPP  224 (948)
T ss_pred             cceeeccchhhhhhhcCCC
Confidence            9999999999999999998

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=5e-29  Score=208.40  Aligned_cols=144  Identities=26%  Similarity=0.371  Sum_probs=124.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......     +.+.  .|..++..+ .||+|+.+++++...+..++||||+++|+|.+++....     .+++..
T Consensus        30 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~-----~~~~~~  102 (323)
T cd05616          30 IKILKKDVVIQDDDVECTM--VEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVG-----RFKEPH  102 (323)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC-----CCCHHH
Confidence            7877654221     2334  778888777 68999999999999999999999999999999887543     688899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +.+++||||||+||++++++.+                     .||+.|+|||++....++
T Consensus       103 ~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  179 (323)
T cd05616         103 AVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYG  179 (323)
T ss_pred             HHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|||+||+.|
T Consensus       180 ~~~DiwSlGvil~elltg~~P  200 (323)
T cd05616         180 KSVDWWAFGVLLYEMLAGQAP  200 (323)
T ss_pred             CccchhchhHHHHHHHhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=4.9e-29  Score=208.36  Aligned_cols=130  Identities=26%  Similarity=0.401  Sum_probs=114.2

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS  167 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~  167 (227)
                      +||.+|+++.|||||+|+++..+.  +..|||+|||..|.+...-....     .+.+.+++.++.++..||+|||   .
T Consensus       157 ~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~-----els~~~Ar~ylrDvv~GLEYLH---~  228 (576)
T KOG0585|consen  157 REIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP-----ELSEQQARKYLRDVVLGLEYLH---Y  228 (576)
T ss_pred             HHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcc-----cccHHHHHHHHHHHHHHHHHHH---h
Confidence            899999999999999999998764  57899999999888765433221     3899999999999999999999   9


Q ss_pred             CCeEEecCCCCceeecCCCce--------------------------ecccCccccccccCCC----CCchhhHHHHHHH
Q 040292          168 RPIVFRDIKPFTTHVNDNDKL--------------------------IGTFGFIAPECITTGN----CNEKSDVYSFGAL  217 (227)
Q Consensus       168 ~~i~H~dlkp~nil~~~~~~~--------------------------~g~~~y~aPE~~~~~~----~~~~~DvwS~G~i  217 (227)
                      ++|+||||||+|+|+++++.+                          +|||.|+|||.+.++.    .+.+.||||+||+
T Consensus       229 QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT  308 (576)
T KOG0585|consen  229 QGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT  308 (576)
T ss_pred             cCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence            999999999999999988754                          6999999999998743    3567899999999


Q ss_pred             HHHHHhCCCC
Q 040292          218 LLELLTGKKG  227 (227)
Q Consensus       218 l~el~tg~~p  227 (227)
                      ||-++.|+-|
T Consensus       309 LYCllfG~~P  318 (576)
T KOG0585|consen  309 LYCLLFGQLP  318 (576)
T ss_pred             HHHhhhccCC
Confidence            9999999877

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1.4e-28  Score=210.98  Aligned_cols=132  Identities=20%  Similarity=0.297  Sum_probs=118.6

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.++++++||||+++++++..+...++|+|++. ++|.+++....     .+++..+..++.|++.||.||| 
T Consensus       129 ~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~ylH-  199 (391)
T PHA03212        129 GTA--TEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKR-----NIAICDILAIERSVLRAIQYLH-  199 (391)
T ss_pred             hhH--HHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH-
Confidence            455  99999999999999999999999999999999995 78988886543     5788999999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELL  222 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~  222 (227)
                        +++|+||||||+||+++.++.+                      .||+.|+|||++....++.++|+||+||++|||+
T Consensus       200 --~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  277 (391)
T PHA03212        200 --ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMA  277 (391)
T ss_pred             --hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence              8999999999999999865432                      4788999999999888999999999999999999


Q ss_pred             hCCCC
Q 040292          223 TGKKG  227 (227)
Q Consensus       223 tg~~p  227 (227)
                      +|+.|
T Consensus       278 tg~~p  282 (391)
T PHA03212        278 TCHDS  282 (391)
T ss_pred             HCCCC
Confidence            99864

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.96  E-value=2.6e-28  Score=197.47  Aligned_cols=145  Identities=22%  Similarity=0.426  Sum_probs=125.9

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +++.  +|+.++++++||||+++++++...+..++||||+++|+|.+++.....    .+++..+..++
T Consensus        33 ik~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~----~~~~~~~~~~~  106 (256)
T cd05113          33 IKMIKEGSMSEDEFI--EEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGK----RFQPSQLLEMC  106 (256)
T ss_pred             EEEcCCCcccHHHHH--HHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCC----CCCHHHHHHHH
Confidence            7877654332 5677  999999999999999999999988899999999999999999975432    57899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++|+||+|+||+++.++.+                      .++..|++||...+..++.++|
T Consensus       107 ~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~D  183 (256)
T cd05113         107 KDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSD  183 (256)
T ss_pred             HHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhH
Confidence            99999999999   9999999999999999876543                      1234699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|+|++ |+.|
T Consensus       184 i~slG~~l~~l~~~g~~p  201 (256)
T cd05113         184 VWAFGVLMWEVYSLGKMP  201 (256)
T ss_pred             HHHHHHHHHHHhcCCCCC
Confidence            9999999999998 8765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=1.5e-28  Score=200.96  Aligned_cols=145  Identities=23%  Similarity=0.420  Sum_probs=121.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  .+|.  +|+.++++++||||++++++|......++||||+++|+|..++....+    .+++..+..+
T Consensus        49 ~k~~~~~~~~~~~~~~--~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~----~~~~~~~~~i  122 (274)
T cd05076          49 LKVLDPSHRDIALAFF--ETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG----RVPVAWKITV  122 (274)
T ss_pred             EEecChHHHHHHHHHH--HHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC----CCCHHHHHHH
Confidence            6666544332  3566  899999999999999999999999999999999999999998865332    5788899999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc------------------------eecccCccccccccC-CCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------LIGTFGFIAPECITT-GNCN  206 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~------------------------~~g~~~y~aPE~~~~-~~~~  206 (227)
                      +.|++.||+|||   +++++||||||+||+++..+.                        ..++..|+|||.+.. ..++
T Consensus       123 ~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~  199 (274)
T cd05076         123 AQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLS  199 (274)
T ss_pred             HHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCC
Confidence            999999999999   999999999999999975321                        135678999998875 4579


Q ss_pred             chhhHHHHHHHHHHHH-hCCCC
Q 040292          207 EKSDVYSFGALLLELL-TGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~-tg~~p  227 (227)
                      .++|+||||+++||++ +|+.|
T Consensus       200 ~~~Dv~slG~~l~el~~~g~~p  221 (274)
T cd05076         200 TAADKWSFGTTLLEICFDGEVP  221 (274)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCC
Confidence            9999999999999995 67665

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.4e-30  Score=211.08  Aligned_cols=144  Identities=24%  Similarity=0.365  Sum_probs=130.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+.-....   ++..  +|+.+|.+++++||.++||.+..+...+++||||.||++.+.+...+     .+.+..+..
T Consensus        43 iKii~Le~~~deIediq--qei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~-----~~~E~~i~~  115 (467)
T KOG0201|consen   43 IKIIDLEEAEDEIEDIQ--QEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGN-----ILDEFEIAV  115 (467)
T ss_pred             EEEechhhcchhhHHHH--HHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCC-----CCccceeee
Confidence            8888755444   5677  99999999999999999999999999999999999999999998654     457788888


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++++++.||.|||   ..+.+|||||+.||++..++.+                     +||+.|||||++....|+.|+
T Consensus       116 ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KA  192 (467)
T KOG0201|consen  116 ILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKA  192 (467)
T ss_pred             ehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchh
Confidence            9999999999999   9999999999999999887543                     799999999999988999999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||||++.+||++|.+|
T Consensus       193 DIWSLGITaiEla~GePP  210 (467)
T KOG0201|consen  193 DIWSLGITAIELAKGEPP  210 (467)
T ss_pred             hhhhhhHHHHHHhcCCCC
Confidence            999999999999999998

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.96  E-value=3.4e-29  Score=209.44  Aligned_cols=144  Identities=22%  Similarity=0.340  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHH-HHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIA-FASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......     .++.  +|.. +++.++||||+++++.+...+..++||||+++|+|.+++....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~   97 (323)
T cd05575          25 VKVLQKKAILKKKEQKHIM--AERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRER-----SFPEPR   97 (323)
T ss_pred             EEEEEHHHHhhhhHHHHHH--HHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcC-----CCCHHH
Confidence            8887643211     2233  5554 5678999999999999999999999999999999999887543     688889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (323)
T cd05575          98 ARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYD  174 (323)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478899999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|||||||++|+|++|+.|
T Consensus       175 ~~~DvwslG~il~ell~g~~p  195 (323)
T cd05575         175 RTVDWWCLGAVLYEMLYGLPP  195 (323)
T ss_pred             ccccccccchhhhhhhcCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.4e-28  Score=197.49  Aligned_cols=145  Identities=23%  Similarity=0.438  Sum_probs=125.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +++.  +|+.++++++||||+++++++...+..++||||+++++|.+++.....    .+++..+..++
T Consensus        33 iK~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~  106 (256)
T cd05059          33 IKMIREGAMSEDDFI--EEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKG----KLGTEWLLDMC  106 (256)
T ss_pred             EEEeccCCCCHHHHH--HHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc----CCCHHHHHHHH
Confidence            7877654333 4677  999999999999999999999999999999999999999999975432    67899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------e---cccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------I---GTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~---g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||++++++.+                   .   ++..|+|||.+....++.++|
T Consensus       107 ~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~D  183 (256)
T cd05059         107 SDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD  183 (256)
T ss_pred             HHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhh
Confidence            99999999999   9999999999999999876532                   1   123599999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|++++ |+.|
T Consensus       184 i~slG~il~~l~~~g~~p  201 (256)
T cd05059         184 VWSFGVLMWEVFSEGKMP  201 (256)
T ss_pred             HHHHHHHHHHHhccCCCC
Confidence            9999999999999 6654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.96  E-value=1.8e-28  Score=203.16  Aligned_cols=146  Identities=25%  Similarity=0.440  Sum_probs=123.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-------------  137 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-------------  137 (227)
                      ||.+......   .+|.  +|+.++.+++||||+++++++...+..++||||+++|+|.+++.....             
T Consensus        51 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  128 (304)
T cd05096          51 VKILRPDANKNARNDFL--KEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPP  128 (304)
T ss_pred             EEEecCCCCHHHHHHHH--HHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccccccc
Confidence            7877654332   3566  999999999999999999999999999999999999999998864321             


Q ss_pred             -CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccC
Q 040292          138 -SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFG  193 (227)
Q Consensus       138 -~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~  193 (227)
                       .....+++.....++.|++.||.|||   +.+++||||||+||+++.++.+                       .++..
T Consensus       129 ~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~  205 (304)
T cd05096         129 AHCLPAISYSSLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIR  205 (304)
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCcc
Confidence             01124678889999999999999999   9999999999999999876533                       12557


Q ss_pred             ccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          194 FIAPECITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       194 y~aPE~~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                      |+|||++....++.++||||||+++|||+++
T Consensus       206 y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~  236 (304)
T cd05096         206 WMAWECILMGKFTTASDVWAFGVTLWEILML  236 (304)
T ss_pred             ccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence            9999999888899999999999999999874

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=2.2e-28  Score=198.70  Aligned_cols=145  Identities=25%  Similarity=0.436  Sum_probs=121.0

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  ..|.  +|+.++++++||||+++++++......++||||+++|+|..++.....    ++++..+..+
T Consensus        37 ~k~~~~~~~~~~~~~~--~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~i  110 (262)
T cd05077          37 LKVLDPSHRDISLAFF--ETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSD----VLTTPWKFKV  110 (262)
T ss_pred             EeecChhhhhHHHHHH--HHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCC----CCCHHHHHHH
Confidence            5665543322  3455  889999999999999999999998899999999999999988865432    6888999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc------------------------eecccCccccccccC-CCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------LIGTFGFIAPECITT-GNCN  206 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~------------------------~~g~~~y~aPE~~~~-~~~~  206 (227)
                      +.|++.||.|||   +++++||||||+||+++.++.                        ..++..|+|||.+.. ..++
T Consensus       111 ~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  187 (262)
T cd05077         111 AKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLS  187 (262)
T ss_pred             HHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcCCCCCC
Confidence            999999999999   999999999999999975432                        136678999998874 5688


Q ss_pred             chhhHHHHHHHHHHHH-hCCCC
Q 040292          207 EKSDVYSFGALLLELL-TGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~-tg~~p  227 (227)
                      .++|||||||++|||+ +|..|
T Consensus       188 ~~~DiwslG~~l~el~~~~~~p  209 (262)
T cd05077         188 IAADKWSFGTTLWEICYNGEIP  209 (262)
T ss_pred             chhHHHHHHHHHHHHHhCCCCC
Confidence            9999999999999997 46554

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=1.1e-28  Score=206.50  Aligned_cols=143  Identities=24%  Similarity=0.363  Sum_probs=122.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHH---HhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAF---ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~---l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.++.....     +.+.  +|+.+   ++.++||||+++++++..++..|+||||+++++|..++...      .+++
T Consensus        29 iK~~~~~~~~~~~~~~~l~--~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~------~l~~  100 (324)
T cd05589          29 IKALKKGDIIARDEVESLM--CEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTD------VFSE  100 (324)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcC------CCCH
Confidence            8887643211     2344  66554   46778999999999999999999999999999999888642      5889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||++++++.+                     +|++.|+|||.+.+..
T Consensus       101 ~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  177 (324)
T cd05589         101 PRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETS  177 (324)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCC
Confidence            999999999999999999   9999999999999999876533                     4788999999999888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+|||||++|||++|+.|
T Consensus       178 ~~~~~DiwslG~il~el~~G~~p  200 (324)
T cd05589         178 YTRAVDWWGLGVLIYEMLVGESP  200 (324)
T ss_pred             CCcccchhhHHHHHHHHHhCCCC
Confidence            99999999999999999999987

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=3.5e-28  Score=199.04  Aligned_cols=149  Identities=25%  Similarity=0.460  Sum_probs=125.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCC----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQL----------  140 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~----------  140 (227)
                      +|.++.....   +.|.  +|+.++++++||||+++++++...+..+++|||+++++|.+++........          
T Consensus        40 ~K~~~~~~~~~~~~~~~--~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  117 (283)
T cd05048          40 IKTLKENAEPKVQQEFR--QEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETV  117 (283)
T ss_pred             EEecccCCCHHHHHHHH--HHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccc
Confidence            7777644332   4566  999999999999999999999998999999999999999999875422111          


Q ss_pred             -cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccc
Q 040292          141 -EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIA  196 (227)
Q Consensus       141 -~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~a  196 (227)
                       ..+++..+..++.|++.||.|||   +++++|+||||+||++++++.+                       .+++.|+|
T Consensus       118 ~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  194 (283)
T cd05048         118 KSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMP  194 (283)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccC
Confidence             25788889999999999999999   9999999999999999876532                       23456999


Q ss_pred             cccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          197 PECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       197 PE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ||.+....++.++|+|||||++|||++ |..|
T Consensus       195 PE~~~~~~~~~~sDv~slG~il~el~~~g~~p  226 (283)
T cd05048         195 PEAILYGKFTTESDIWSFGVVLWEIFSYGLQP  226 (283)
T ss_pred             HHHhccCcCchhhhHHHHHHHHHHHHcCCCCC
Confidence            999988889999999999999999998 8765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=2.7e-28  Score=200.84  Aligned_cols=149  Identities=26%  Similarity=0.459  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------CC
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------QL  140 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------~~  140 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++......           ..
T Consensus        40 ~k~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~  117 (291)
T cd05094          40 VKALKDPTLAARKDFQ--REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK  117 (291)
T ss_pred             EEecCCccHHHHHHHH--HHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCc
Confidence            6666544433  4566  9999999999999999999999999999999999999999999754310           11


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccc
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAP  197 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aP  197 (227)
                      ..+++..+..++.|++.|++|||   +++++||||||+||++++++.+                       .++..|+||
T Consensus       118 ~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  194 (291)
T cd05094         118 GELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  194 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecCh
Confidence            24789999999999999999999   9999999999999999876533                       235579999


Q ss_pred             ccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          198 ECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       198 E~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |.+.+..++.++|+||||+++|||+| |+.|
T Consensus       195 E~~~~~~~~~~~Di~slG~il~el~t~g~~p  225 (291)
T cd05094         195 ESIMYRKFTTESDVWSFGVILWEIFTYGKQP  225 (291)
T ss_pred             HHhccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99988889999999999999999999 8876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.96  E-value=3.4e-28  Score=200.01  Aligned_cols=149  Identities=26%  Similarity=0.481  Sum_probs=126.0

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC--------CCCccc
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG--------SQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~--------~~~~~l  143 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++...+..++|+||+++++|.+++.....        .....+
T Consensus        40 ik~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l  117 (288)
T cd05093          40 VKTLKDASDNARKDFH--REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAEL  117 (288)
T ss_pred             EEecCCcCHHHHHHHH--HHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCC
Confidence            6666544332  4566  999999999999999999999999999999999999999999875431        112258


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECI  200 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~  200 (227)
                      ++..+..++.|++.||+|||   +.+++||||||+||++++++.+                       .++..|+|||.+
T Consensus       118 ~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  194 (288)
T cd05093         118 TQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI  194 (288)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHh
Confidence            99999999999999999999   9999999999999999876543                       124579999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+..++.++|+||||+++|+|++ |.+|
T Consensus       195 ~~~~~~~~sDiwslG~il~~l~t~g~~p  222 (288)
T cd05093         195 MYRKFTTESDVWSLGVVLWEIFTYGKQP  222 (288)
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            88889999999999999999998 7765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=5.2e-29  Score=209.11  Aligned_cols=134  Identities=20%  Similarity=0.266  Sum_probs=119.1

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.++..++|+||+++++++...+..++||||+++|+|.+++.....    .+++..+..++.|++.||.||| 
T Consensus        47 ~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~----~l~~~~~~~~~~qi~~al~~lH-  119 (332)
T cd05623          47 CFR--EERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED----RLPEDMARFYLAEMVIAIDSVH-  119 (332)
T ss_pred             HHH--HHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH-
Confidence            356  899999999999999999999999999999999999999999975332    6788889999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce----------------------ecccCcccccccc-----CCCCCchhhHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECIT-----TGNCNEKSDVYSFGAL  217 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~-----~~~~~~~~DvwS~G~i  217 (227)
                        +.+++||||||+||+++.++.+                      +||+.|+|||++.     ...++.++|+|||||+
T Consensus       120 --~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvi  197 (332)
T cd05623         120 --QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVC  197 (332)
T ss_pred             --HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHH
Confidence              9999999999999999865432                      4788999999986     3457889999999999


Q ss_pred             HHHHHhCCCC
Q 040292          218 LLELLTGKKG  227 (227)
Q Consensus       218 l~el~tg~~p  227 (227)
                      +|||++|+.|
T Consensus       198 l~ell~g~~P  207 (332)
T cd05623         198 MYEMLYGETP  207 (332)
T ss_pred             HHHHhcCCCC
Confidence            9999999987

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.96  E-value=2e-28  Score=198.69  Aligned_cols=146  Identities=25%  Similarity=0.434  Sum_probs=125.1

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... .++.  +|+.++++++||||+++++++..++..+++|||+++++|.+++.....   ..+++..+..++
T Consensus        36 ~K~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~l~~~~~~~~~  110 (263)
T cd05052          36 VKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVNAVVLLYMA  110 (263)
T ss_pred             EEEecCCchHHHHHH--HHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCC---CCCCHHHHHHHH
Confidence            7777644332 4566  999999999999999999999999999999999999999999865432   257888899999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||+|||   +++++||||||+||++++++.+                      .++..|+|||.+.+..++.++|
T Consensus       111 ~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  187 (263)
T cd05052         111 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD  187 (263)
T ss_pred             HHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhH
Confidence            99999999999   9999999999999999876543                      1234699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      |||||+++|||++ |..|
T Consensus       188 v~slG~il~el~t~g~~p  205 (263)
T cd05052         188 VWAFGVLLWEIATYGMSP  205 (263)
T ss_pred             HHHHHHHHHHHHcCCCCC
Confidence            9999999999998 7765

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=7.9e-29  Score=206.96  Aligned_cols=144  Identities=23%  Similarity=0.352  Sum_probs=122.7

Q ss_pred             eEEEcCCCCc-----ccccchhHHH-HHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIA-FASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+......     ..+.  +|.. +++.++||||+++++++...+..++||||+++|+|.+.+....     .+++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~   97 (321)
T cd05603          25 VKVLQKKTILKKKEQNHIM--AERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRER-----CFLEPR   97 (321)
T ss_pred             EEEEEHHHHHHhhHHHHHH--HHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcC-----CCCHHH
Confidence            7777543211     2333  5554 6788999999999999999999999999999999998886543     578888


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +.+++||||||+||+++.++.+                     +|++.|+|||.+.+..++
T Consensus        98 ~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (321)
T cd05603          98 ARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYD  174 (321)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCC
Confidence            8999999999999999   9999999999999999876532                     478889999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|||++|+.|
T Consensus       175 ~~~DiwslG~il~el~~g~~p  195 (321)
T cd05603         175 RTVDWWCLGAVLYEMLYGLPP  195 (321)
T ss_pred             CcCcccccchhhhhhhcCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=2e-28  Score=208.85  Aligned_cols=149  Identities=20%  Similarity=0.341  Sum_probs=124.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||.++.....   +.+.  +|+.+|..+ +||||++++++|..++..++||||+++|+|.+++......           
T Consensus        70 vK~l~~~~~~~~~~~~~--~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~  147 (375)
T cd05104          70 VKMLKPSAHLTEREALM--SELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAE  147 (375)
T ss_pred             EEeccCCcCcHHHHHHH--HHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhh
Confidence            8888654333   3455  999999999 8999999999999999999999999999999988643210           


Q ss_pred             -----------------------------------------------------------CCcccCHHHHHHHHHHHHHHH
Q 040292          139 -----------------------------------------------------------QLEPFLMKHRLKVAMEIANAV  159 (227)
Q Consensus       139 -----------------------------------------------------------~~~~l~~~~~~~i~~~i~~gl  159 (227)
                                                                                 ...++++..+..++.|++.||
T Consensus       148 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l  227 (375)
T cd05104         148 AALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGM  227 (375)
T ss_pred             hHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence                                                                       001477888999999999999


Q ss_pred             HHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHH
Q 040292          160 AYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGA  216 (227)
Q Consensus       160 ~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~  216 (227)
                      .|||   +++++||||||+||+++.++.+                       .++..|+|||++....++.++|||||||
T Consensus       228 ~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~  304 (375)
T cd05104         228 SFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI  304 (375)
T ss_pred             HHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHH
Confidence            9999   9999999999999999875432                       1234699999998888999999999999


Q ss_pred             HHHHHHh-CCCC
Q 040292          217 LLLELLT-GKKG  227 (227)
Q Consensus       217 il~el~t-g~~p  227 (227)
                      ++|||++ |..|
T Consensus       305 ~l~ellt~g~~p  316 (375)
T cd05104         305 LLWEIFSLGSSP  316 (375)
T ss_pred             HHHHHHhcCCCC
Confidence            9999998 6654

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.95  E-value=4.5e-28  Score=197.99  Aligned_cols=149  Identities=28%  Similarity=0.520  Sum_probs=127.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC---------CCCc
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG---------SQLE  141 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~~~  141 (227)
                      ||.++.....   +.+.  +|+.++++++||||+++++++..+...++||||+++++|.+++...+.         ....
T Consensus        40 iK~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~  117 (280)
T cd05049          40 VKTLKETASNDARKDFE--REAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG  117 (280)
T ss_pred             EEeecccCCHHHHHHHH--HHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccc
Confidence            8887655443   4677  999999999999999999999999999999999999999999975431         1112


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPE  198 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE  198 (227)
                      .+++..+..++.|++.|+.|||   +++++||||||+||+++.++.+                       .+++.|+|||
T Consensus       118 ~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (280)
T cd05049         118 ELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPE  194 (280)
T ss_pred             cccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChh
Confidence            5788899999999999999999   9999999999999999875533                       1345699999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+.+..++.++||||||+++|||++ |..|
T Consensus       195 ~~~~~~~~~~~Di~slG~il~e~~~~g~~p  224 (280)
T cd05049         195 SIMYRKFTTESDVWSFGVVLWEIFTYGKQP  224 (280)
T ss_pred             hhccCCcchhhhHHHHHHHHHHHHhcCCCC
Confidence            9998889999999999999999998 8876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=8.5e-29  Score=207.78  Aligned_cols=145  Identities=19%  Similarity=0.250  Sum_probs=124.3

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.++..++||||+++++++..++..|+||||+++|+|.+++.....    .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~----~~~~~~~  104 (331)
T cd05597          31 MKILNKWEMLKRAETACFR--EERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED----RLPEDMA  104 (331)
T ss_pred             EEEEEHHHHhhhhhHHHHH--HHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcC----CCCHHHH
Confidence            787764211     13456  899999999999999999999999999999999999999999975332    5788899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccC----
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITT----  202 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~----  202 (227)
                      ..++.|++.||+|||   +++++||||||+||+++.++.+                      .||+.|+|||++..    
T Consensus       105 ~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (331)
T cd05597         105 RFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDG  181 (331)
T ss_pred             HHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhcccc
Confidence            999999999999999   9999999999999999875432                      47889999999863    


Q ss_pred             -CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 -GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 -~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       ..++.++||||+||++|+|++|+.|
T Consensus       182 ~~~~~~~~DiwslG~~l~el~~g~~P  207 (331)
T cd05597         182 KGRYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             ccCCCCcceeehhhhHHHHHhhCCCC
Confidence             3478899999999999999999987

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.95  E-value=1.8e-28  Score=209.08  Aligned_cols=149  Identities=23%  Similarity=0.408  Sum_probs=124.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG------------  137 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~------------  137 (227)
                      ||.++.....   +.+.  +|+.+++.+ +||||++++++|...+..++||||+++|+|.+++.....            
T Consensus        73 vK~~~~~~~~~~~~~~~--~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~  150 (374)
T cd05106          73 VKMLKASAHTDEREALM--SELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEI  150 (374)
T ss_pred             EEeccCCCCHHHHHHHH--HHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhcccccccccc
Confidence            7888755433   3455  999999999 899999999999999999999999999999998853210            


Q ss_pred             -----------------------------------------------------CCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292          138 -----------------------------------------------------SQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus       138 -----------------------------------------------------~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                                                                           ....++++..+..++.|++.||.||| 
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH-  229 (374)
T cd05106         151 SETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA-  229 (374)
T ss_pred             ccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH-
Confidence                                                                 00124788889999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLEL  221 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el  221 (227)
                        +++++||||||+||++++++.+                       .++..|+|||++....++.++|||||||++|||
T Consensus       230 --~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~el  307 (374)
T cd05106         230 --SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI  307 (374)
T ss_pred             --HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHH
Confidence              9999999999999999875432                       123469999999888899999999999999999


Q ss_pred             Hh-CCCC
Q 040292          222 LT-GKKG  227 (227)
Q Consensus       222 ~t-g~~p  227 (227)
                      ++ |+.|
T Consensus       308 lt~G~~P  314 (374)
T cd05106         308 FSLGKSP  314 (374)
T ss_pred             HhCCCCC
Confidence            97 8876

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.95  E-value=3.2e-28  Score=196.08  Aligned_cols=145  Identities=25%  Similarity=0.370  Sum_probs=128.9

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      +|.+......+++.  +|+.++++++||||+++++.+..+...++++||+++++|.+++.....    .+++..+..++.
T Consensus        33 ~k~~~~~~~~~~~~--~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~----~l~~~~~~~~~~  106 (256)
T cd06612          33 IKVVPVEEDLQEII--KEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK----TLTEEEIAAILY  106 (256)
T ss_pred             EEEeecHHHHHHHH--HHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCcc----CCCHHHHHHHHH
Confidence            77776554456777  999999999999999999999999999999999999999999875432    688999999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHH
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVY  212 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~Dvw  212 (227)
                      |++.||.|||   +.+++|+||+|+||++++++.+                     .++..|+|||.+.+..++.++|+|
T Consensus       107 ~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~  183 (256)
T cd06612         107 QTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIW  183 (256)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHH
Confidence            9999999999   8999999999999999876533                     356789999999888899999999


Q ss_pred             HHHHHHHHHHhCCCC
Q 040292          213 SFGALLLELLTGKKG  227 (227)
Q Consensus       213 S~G~il~el~tg~~p  227 (227)
                      |||+++|+|++|+.|
T Consensus       184 s~G~il~~l~~g~~p  198 (256)
T cd06612         184 SLGITAIEMAEGKPP  198 (256)
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.95  E-value=1.1e-28  Score=206.45  Aligned_cols=130  Identities=25%  Similarity=0.393  Sum_probs=116.4

Q ss_pred             hHHH-HHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           90 NCIA-FASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        90 ~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      +|.. +++.++||||+++++++...+..++||||+++|+|.+++....     .+.+..+..++.|++.||.|||   ++
T Consensus        44 ~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH---~~  115 (325)
T cd05602          44 SERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-----CFLEPRARFYAAEIASALGYLH---SL  115 (325)
T ss_pred             HHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HC
Confidence            4544 5688899999999999999999999999999999999987643     5778888889999999999999   99


Q ss_pred             CeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          169 PIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +++||||||+||+++.++.+                     +||+.|+|||++.+..++.++||||+||++|+|++|+.|
T Consensus       116 giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  195 (325)
T cd05602         116 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP  195 (325)
T ss_pred             CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCC
Confidence            99999999999999876432                     478899999999988899999999999999999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=3.3e-28  Score=197.92  Aligned_cols=149  Identities=20%  Similarity=0.370  Sum_probs=120.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.+++.++||||+++++.+...+..++||||+++|+|.+++...........++.....
T Consensus        27 ~k~~~~~~~~~~~~~~~--~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  104 (269)
T cd05042          27 VKELRASATPDEQLLFL--QEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQR  104 (269)
T ss_pred             EeecCccCChHHHHHHH--HHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHH
Confidence            5655443322   3455  9999999999999999999999999999999999999999999765432222356777889


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC-----
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT-----  202 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~-----  202 (227)
                      ++.|++.||+|||   +.+++||||||+|+++++++.+                       .+++.|+|||+...     
T Consensus       105 ~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  181 (269)
T cd05042         105 MACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDL  181 (269)
T ss_pred             HHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccc
Confidence            9999999999999   9999999999999999876543                       12345999998742     


Q ss_pred             --CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 --GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 --~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                        ..++.++|+|||||++|||++ |..|
T Consensus       182 ~~~~~~~~~DiwslG~~l~el~~~~~~p  209 (269)
T cd05042         182 LPKDQTKKSNIWSLGVTMWELFTAADQP  209 (269)
T ss_pred             cccccchhhHHHHHHHHHHHHHhCCCCC
Confidence              346789999999999999999 5554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2e-28  Score=201.25  Aligned_cols=146  Identities=21%  Similarity=0.342  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     ..+.  +|+.++++++||||+++++.+..++..++||||+++|+|.+++.....   ..+++..+
T Consensus        30 vK~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~  104 (285)
T cd05605          30 CKKLEKKRIKKRKGEAMAL--NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGN---PGFDEERA  104 (285)
T ss_pred             EEEEehhhhhhhhhHHHHH--HHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCc---CCCCHHHH
Confidence            7777643222     2344  899999999999999999999999999999999999999988864321   25889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||.|||   +.+++||||||+||++++++.+                    +|++.|+|||++.+..++.+
T Consensus       105 ~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (285)
T cd05605         105 VFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFS  181 (285)
T ss_pred             HHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCcc
Confidence            999999999999999   8999999999999999876432                    46788999999988889999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|||++|+.|
T Consensus       182 ~Diws~G~~l~el~~g~~p  200 (285)
T cd05605         182 PDWWGLGCLIYEMIEGKSP  200 (285)
T ss_pred             ccchhHHHHHHHHHHCCCC
Confidence            9999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.95  E-value=7.2e-29  Score=207.61  Aligned_cols=144  Identities=26%  Similarity=0.369  Sum_probs=123.7

Q ss_pred             eEEEcCCCC---c--ccccchhHHH-HHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN---T--EEYYCFNCIA-FASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~---~--~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+.....   .  ..+.  +|.. +++.++||||+++++++..++..++||||+++|+|.+++....     ++++..
T Consensus        25 iK~~~~~~~~~~~~~~~~~--~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~   97 (325)
T cd05604          25 VKVLQKKIVLNRKEQKHIM--AERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRER-----SFPEPR   97 (325)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcC-----CCCHHH
Confidence            787754321   1  2333  5654 5678899999999999999999999999999999998887543     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +.+++||||||+||++++++.+                     +|++.|+|||++.+..++
T Consensus        98 ~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (325)
T cd05604          98 ARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYD  174 (325)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876532                     478889999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|||||||++|+|++|+.|
T Consensus       175 ~~~DvwslG~il~el~~G~~p  195 (325)
T cd05604         175 NTVDWWCLGAVLYEMLYGLPP  195 (325)
T ss_pred             CcCccccccceehhhhcCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.95  E-value=7e-28  Score=194.09  Aligned_cols=145  Identities=24%  Similarity=0.429  Sum_probs=123.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.++++++||||++++++|...+..++||||+++++|.+++.....    .+++..+..
T Consensus        25 ~k~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~   98 (252)
T cd05084          25 VKSCRETLPPDLKAKFL--QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGP----RLKVKELIQ   98 (252)
T ss_pred             EEecCccCCHHHHHHHH--HHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCC----CCCHHHHHH
Confidence            6666543222   3566  999999999999999999999999999999999999999999865432    578999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee-----------------------cccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI-----------------------GTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~-----------------------g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +++++|+||+|+||+++.++.+.                       .+..|+|||.+.+..++.
T Consensus        99 ~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  175 (252)
T cd05084          99 MVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSS  175 (252)
T ss_pred             HHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCCh
Confidence            9999999999999   99999999999999998765430                       123499999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|+||||+++|||++ |..|
T Consensus       176 ~~Dv~slG~il~e~~~~~~~p  196 (252)
T cd05084         176 ESDVWSFGILLWEAFSLGAVP  196 (252)
T ss_pred             HHHHHHHHHHHHHHHhCCCCC
Confidence            9999999999999998 6655

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.95  E-value=1.1e-28  Score=200.20  Aligned_cols=146  Identities=36%  Similarity=0.638  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   ++|.  +|+..+++++||||++++|+|...+..++|+||+++|+|.+++.....   ..+++..+..
T Consensus        33 vk~~~~~~~~~~~~~~~--~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~---~~~~~~~~~~  107 (259)
T PF07714_consen   33 VKILKPSSSEEEEEEFL--NEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNK---EPLSEQQRLS  107 (259)
T ss_dssp             EEEESTTSSHHHHHHHH--HHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCT---TTSBHHHHHH
T ss_pred             EEEeccccccccceeee--eccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccc
Confidence            8888664443   4666  999999999999999999999988889999999999999999987511   2688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +++++|+||+|+||+++.++.+                       .+...|+|||.+.+..++.
T Consensus       108 i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  184 (259)
T PF07714_consen  108 IAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTK  184 (259)
T ss_dssp             HHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESH
T ss_pred             ccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999   8899999999999999976543                       2445699999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++||||||+++||+++ |+.|
T Consensus       185 ksDVysfG~~l~ei~~~~~~p  205 (259)
T PF07714_consen  185 KSDVYSFGMLLYEILTLGKFP  205 (259)
T ss_dssp             HHHHHHHHHHHHHHHTTSSGT
T ss_pred             ccccccccccccccccccccc
Confidence            9999999999999999 5554

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2e-28  Score=212.41  Aligned_cols=143  Identities=25%  Similarity=0.373  Sum_probs=126.6

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++....-     +...  .|-+++... +||.++.++.+|...+++|+||||+.||++..+.+..      .+++..
T Consensus       398 IK~LKK~~Il~~d~Ve~~~--~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~------~F~e~r  469 (694)
T KOG0694|consen  398 IKVLKKGDILQRDEVESLM--CEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTD------VFSEPR  469 (694)
T ss_pred             EEEeeccceeccccHHHHH--HHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEecc------cccHHH
Confidence            9998876543     2333  777777766 6999999999999999999999999999965555432      689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++..++.||+|||   +++|++||||-+|||+|.+|.+                     +|||.|+|||++.+..|+
T Consensus       470 arfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt  546 (694)
T KOG0694|consen  470 ARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYT  546 (694)
T ss_pred             HHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCChhhcChhhhccCccc
Confidence            9999999999999999   9999999999999999987644                     899999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..+|.|||||++|||+.|++|
T Consensus       547 ~aVDWW~lGVLlyeML~Gq~P  567 (694)
T KOG0694|consen  547 RAVDWWGLGVLLYEMLVGESP  567 (694)
T ss_pred             chhhHHHHHHHHHHHHcCCCC
Confidence            999999999999999999988

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=3.5e-28  Score=196.81  Aligned_cols=143  Identities=23%  Similarity=0.463  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++.....    .+++..+..+
T Consensus        32 ~k~~~~~~~~~~~~~~--~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~  105 (258)
T cd05078          32 LKVLDKSHRNYSESFF--EAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKN----LINISWKLEV  105 (258)
T ss_pred             HHhhcchhHHHHHHHH--HHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCC----CCCHHHHHHH
Confidence            5555443322  4566  899999999999999999999998999999999999999999976542    5788899999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-------------------------eecccCccccccccCC-CC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-------------------------LIGTFGFIAPECITTG-NC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-------------------------~~g~~~y~aPE~~~~~-~~  205 (227)
                      +.|++.||+|||   +++++||||||+||+++.++.                         ..+++.|+|||++.+. .+
T Consensus       106 ~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  182 (258)
T cd05078         106 AKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIENPQNL  182 (258)
T ss_pred             HHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccCCCCC
Confidence            999999999999   999999999999999976542                         1466789999999864 47


Q ss_pred             CchhhHHHHHHHHHHHHhCC
Q 040292          206 NEKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~  225 (227)
                      +.++|+||||+++|+|++|.
T Consensus       183 ~~~~DiwslG~~l~~l~~g~  202 (258)
T cd05078         183 SLAADKWSFGTTLWEIFSGG  202 (258)
T ss_pred             CchhhHHHHHHHHHHHHcCC
Confidence            89999999999999999985

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.95  E-value=3.5e-28  Score=205.72  Aligned_cols=140  Identities=26%  Similarity=0.388  Sum_probs=117.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.+++.++|+||+++++++..++..++||||+++|+|.+..         ...+..+..
T Consensus       104 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~---------~~~~~~~~~  172 (353)
T PLN00034        104 LKVIYGNHEDTVRRQIC--REIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTH---------IADEQFLAD  172 (353)
T ss_pred             EEEEecCCcHHHHHHHH--HHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccc---------cCCHHHHHH
Confidence            8887654332   4566  9999999999999999999999999999999999999986532         345667788


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-----C
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-----N  204 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-----~  204 (227)
                      ++.|++.||.|||   +.+++||||||+||++++++.+                     .||..|+|||.+...     .
T Consensus       173 i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  249 (353)
T PLN00034        173 VARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAY  249 (353)
T ss_pred             HHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccccCccccccccccCcC
Confidence            9999999999999   9999999999999999876532                     477889999987432     2


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.++|||||||++|||++|+.|
T Consensus       250 ~~~~~DvwslGvil~el~~g~~p  272 (353)
T PLN00034        250 DGYAGDIWSLGVSILEFYLGRFP  272 (353)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCC
Confidence            35689999999999999999876

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.6e-28  Score=198.17  Aligned_cols=145  Identities=21%  Similarity=0.309  Sum_probs=125.0

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++.+..++..++||||+++++|.+++.....    ++++..+..+
T Consensus        35 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~l~~~~~~~~  108 (280)
T cd06611          35 AKIIQIESEEELEDFM--VEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELER----GLTEPQIRYV  108 (280)
T ss_pred             EEEEeeCCHHHHHHHH--HHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcC----CCCHHHHHHH
Confidence            7777644333  4666  999999999999999999999999999999999999999999876432    6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc-----CCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT-----TGNC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~-----~~~~  205 (227)
                      +.|++.||.|||   +.+++|+||+|+|++++.++.+                     .+++.|++||.+.     ...+
T Consensus       109 ~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~  185 (280)
T cd06611         109 CRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPY  185 (280)
T ss_pred             HHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCC
Confidence            999999999999   9999999999999999865432                     4677899999875     2346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+||||+++|+|++|+.|
T Consensus       186 ~~~sDi~slG~il~~l~~g~~p  207 (280)
T cd06611         186 DYKADIWSLGITLIELAQMEPP  207 (280)
T ss_pred             CccccHHHHHHHHHHHHhCCCC
Confidence            7899999999999999999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.95  E-value=7.4e-29  Score=215.65  Aligned_cols=147  Identities=24%  Similarity=0.406  Sum_probs=127.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.++.....   +...  +|+++|++++|||||++++.-.+..      ...+|||||+||||+..+.++.+..  -++
T Consensus        43 vK~~~~~~~~r~~e~~~--~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~--GLp  118 (732)
T KOG4250|consen   43 VKTFNKESSLRPRERWC--REIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAY--GLP  118 (732)
T ss_pred             HHhhhhhcccchHHHHH--HHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCccccc--CCC
Confidence            8988875543   4555  9999999999999999998865543      5689999999999999999876544  589


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC--C----------------------ceecccCccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN--D----------------------KLIGTFGFIAPECI  200 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~--~----------------------~~~g~~~y~aPE~~  200 (227)
                      +.+.+.++.++..||.|||   .++|+||||||.||++-..  +                      +++||..|.+||..
T Consensus       119 E~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~  195 (732)
T KOG4250|consen  119 ESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELY  195 (732)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHH
Confidence            9999999999999999999   9999999999999987432  1                      23799999999999


Q ss_pred             cC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .. ..|+..+|.|||||++|+.+||..|
T Consensus       196 E~q~~y~~tVDLWS~GvtlY~caTG~lP  223 (732)
T KOG4250|consen  196 ERQKKYTATVDLWSFGVTLYECATGELP  223 (732)
T ss_pred             hhccCcCceeehhhhhhHHHHHhccCCC
Confidence            85 7789999999999999999999987

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.6e-28  Score=207.38  Aligned_cols=159  Identities=19%  Similarity=0.283  Sum_probs=134.8

Q ss_pred             cCCCCCC---eeecCCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhh
Q 040292           60 NNYDPGK---GFLQDHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD  130 (227)
Q Consensus        60 ~~f~~~~---~~~~~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~  130 (227)
                      +.|..+.   .++.|..  ||.+......    ..+.  +|+++|+-++|||||++|++...+...|||+|.-.+|+|.|
T Consensus        29 GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlf--qEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~D  106 (864)
T KOG4717|consen   29 GHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLF--QEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFD  106 (864)
T ss_pred             CceehhhhhhhhcccceeEEEEecccccchhhhhHHH--HHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHH
Confidence            3455444   4556665  8888765444    3444  99999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC---------------------cee
Q 040292          131 RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND---------------------KLI  189 (227)
Q Consensus       131 ~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~---------------------~~~  189 (227)
                      ++.+...    -+.+..+..++.||+.|+.|||   ...++||||||+|+.+.+..                     +.|
T Consensus       107 yImKHe~----Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsC  179 (864)
T KOG4717|consen  107 YIMKHEE----GLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSC  179 (864)
T ss_pred             HHHhhhc----cccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhccc
Confidence            9976542    5888899999999999999999   99999999999999775431                     127


Q ss_pred             cccCccccccccCCCCC-chhhHHHHHHHHHHHHhCCCC
Q 040292          190 GTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       190 g~~~y~aPE~~~~~~~~-~~~DvwS~G~il~el~tg~~p  227 (227)
                      |+..|-|||.+.+..|+ +..||||+||+||.+++|++|
T Consensus       180 GSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~P  218 (864)
T KOG4717|consen  180 GSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPP  218 (864)
T ss_pred             chhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCc
Confidence            99999999999999885 678999999999999999998

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=7e-28  Score=196.08  Aligned_cols=149  Identities=21%  Similarity=0.317  Sum_probs=121.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.++.....   ..+.  +|+.++++++||||+++++++.+....++||||+++|+|.+++...........++..+..
T Consensus        27 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  104 (269)
T cd05087          27 VKELRVSASVQEQMKFL--EEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQR  104 (269)
T ss_pred             EEecCCCCChHHHHHHH--HHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHH
Confidence            7776654433   2455  8999999999999999999999988999999999999999999753321112456777788


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCC----
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTG----  203 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~----  203 (227)
                      ++.|++.|+.|||   +.+++|+||||+|++++.++.+                       .++..|+|||++...    
T Consensus       105 ~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  181 (269)
T cd05087         105 MACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNL  181 (269)
T ss_pred             HHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccc
Confidence            9999999999999   9999999999999999875432                       234569999988532    


Q ss_pred             ---CCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          204 ---NCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       204 ---~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                         .++.++|+||||+++|||++ |+.|
T Consensus       182 ~~~~~~~~~DiwslG~~l~el~~~g~~p  209 (269)
T cd05087         182 LVVDQTKESNVWSLGVTIWELFELGSQP  209 (269)
T ss_pred             cccCCCccchhHHHHHHHHHHHhCCCCC
Confidence               35789999999999999996 8866

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.95  E-value=1.2e-28  Score=206.65  Aligned_cols=144  Identities=22%  Similarity=0.277  Sum_probs=124.1

Q ss_pred             eEEEcCCCC------cccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLN------TEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~------~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      +|.+.....      .+.+.  +|+.++..+ +||||+++++++..++..++||||+++|+|.+++....     .+++.
T Consensus        33 iK~~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~  105 (332)
T cd05614          33 MKVLQKAALVQKAKTVEHTR--TERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRD-----NFSED  105 (332)
T ss_pred             EEEEEHHHHhhhhhHHHHHH--HHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHH
Confidence            777754211      13455  899999999 69999999999999999999999999999999987543     68889


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~  204 (227)
                      .+..++.|++.||.|||   +.+++||||||+||+++.++.+                      .||+.|+|||++.+..
T Consensus       106 ~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  182 (332)
T cd05614         106 EVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKG  182 (332)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCC
Confidence            99999999999999999   9999999999999999876532                      4788999999997654


Q ss_pred             -CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 -CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 -~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       ++.++|||||||++|||+||+.|
T Consensus       183 ~~~~~~DiwslG~il~elltg~~p  206 (332)
T cd05614         183 GHGKAVDWWSLGILIFELLTGASP  206 (332)
T ss_pred             CCCCccccccchhhhhhhhcCCCC
Confidence             78899999999999999999977

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=3.8e-28  Score=200.65  Aligned_cols=143  Identities=24%  Similarity=0.384  Sum_probs=125.8

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++.+..+...++||||+++++|.+++...      .+++.++..+
T Consensus        50 ik~~~~~~~~~~~~~~--~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~i  121 (296)
T cd06654          50 IRQMNLQQQPKKELII--NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAV  121 (296)
T ss_pred             EEEEecCCcchHHHHH--HHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhc------CCCHHHHHHH
Confidence            7777654433  4555  9999999999999999999999999999999999999999998642      5788899999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||.|||   +.+++|+||+|+||+++.++.+                     .+++.|+|||.+....++.++|
T Consensus       122 ~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  198 (296)
T cd06654         122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD  198 (296)
T ss_pred             HHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccch
Confidence            999999999999   9999999999999999876532                     4667899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +|||||++|+|++|+.|
T Consensus       199 v~s~Gvil~~l~~g~~p  215 (296)
T cd06654         199 IWSLGIMAIEMIEGEPP  215 (296)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.8e-29  Score=210.95  Aligned_cols=144  Identities=21%  Similarity=0.272  Sum_probs=127.3

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++....     ...+.  +|+.++..++||||+++++++.+++..++||||+++++|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~  103 (350)
T cd05573          31 MKVLRKSDMIKRNQIAHVR--AERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKD-----VFPEETA  103 (350)
T ss_pred             EEEEEHHHHhhccHHHHHH--HHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcC-----CCCHHHH
Confidence            888764321     13456  89999999999999999999999999999999999999999997653     6888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------------------  188 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------------------  188 (227)
                      ..++.|++.||+|||   +.+++||||||+||+++.++.+                                        
T Consensus       104 ~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (350)
T cd05573         104 RFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDH  180 (350)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccccccc
Confidence            999999999999999   9999999999999999875432                                        


Q ss_pred             ----------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ----------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ----------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                .||+.|+|||.+.+..++.++|||||||++|||++|+.|
T Consensus       181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~P  229 (350)
T cd05573         181 KQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP  229 (350)
T ss_pred             ccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCC
Confidence                      377889999999988999999999999999999999987

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.95  E-value=2.6e-28  Score=204.12  Aligned_cols=144  Identities=24%  Similarity=0.355  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......     +.+.  .|+.++..+. |++|+++++++...+..++||||+++|+|.+++....     .+++..
T Consensus        30 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~-----~l~~~~  102 (323)
T cd05615          30 IKILKKDVVIQDDDVECTM--VEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG-----KFKEPQ  102 (323)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcC-----CCCHHH
Confidence            7877643211     3344  7888888885 5778889999998899999999999999999987543     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++++||||||+||++++++.+                     .||+.|+|||++.+..++
T Consensus       103 ~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  179 (323)
T cd05615         103 AVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYG  179 (323)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCC
Confidence            9999999999999999   9999999999999999876532                     378899999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|+|++|+.|
T Consensus       180 ~~~DiwslGvil~elltG~~p  200 (323)
T cd05615         180 KSVDWWAYGVLLYEMLAGQPP  200 (323)
T ss_pred             CccchhhhHHHHHHHHhCCCC
Confidence            999999999999999999987

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=2.2e-28  Score=197.08  Aligned_cols=146  Identities=25%  Similarity=0.404  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +++.  +|+.++++++|||++++++++...+..++||||+++++|.+++.....   ..+++..+.
T Consensus        30 ~k~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~  104 (256)
T cd08529          30 MKQIDLSKMNRREREEAI--DEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRG---RPLPEDQVW  104 (256)
T ss_pred             EEEeehhhCCHHHHHHHH--HHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcC---CCCCHHHHH
Confidence            7776543221    4555  999999999999999999999999999999999999999999976421   267888999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++.+                     .|++.|+|||+..+..++.+
T Consensus       105 ~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (256)
T cd08529         105 RFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEK  181 (256)
T ss_pred             HHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCc
Confidence            99999999999999   8999999999999999875432                     36678999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||||+++|+|++|+.|
T Consensus       182 ~Di~slG~il~~l~~g~~p  200 (256)
T cd08529         182 SDVWALGVVLYECCTGKHP  200 (256)
T ss_pred             cchHHHHHHHHHHHhCCCC
Confidence            9999999999999999977

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.95  E-value=2.9e-28  Score=197.25  Aligned_cols=146  Identities=23%  Similarity=0.418  Sum_probs=125.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +.+.  +|+.++++++||||+++++.+..++..+++|||+++++|.+++.....   ..+++..+..++
T Consensus        35 iK~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~  109 (261)
T cd05072          35 VKTLKPGTMSVQAFL--EEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEG---GKVLLPKLIDFS  109 (261)
T ss_pred             EEEccCCchhHHHHH--HHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcC---CCCCHHHHHHHH
Confidence            7776644332 5677  999999999999999999999999999999999999999999865321   257788889999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||+|||   ..+++|+||+|+||++++++.+                      .++..|+|||++....++.++|
T Consensus       110 ~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05072         110 AQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD  186 (261)
T ss_pred             HHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhh
Confidence            99999999999   8999999999999999876543                      1344699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|+|+| |+.|
T Consensus       187 i~slG~~l~~l~t~g~~p  204 (261)
T cd05072         187 VWSFGILLYEIVTYGKIP  204 (261)
T ss_pred             hhhhHHHHHHHHccCCCC
Confidence            9999999999998 7765

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.95  E-value=5.6e-29  Score=193.13  Aligned_cols=134  Identities=26%  Similarity=0.422  Sum_probs=120.3

Q ss_pred             ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhh
Q 040292           84 EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH  163 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH  163 (227)
                      ++..  +|+.+-+.|+||||+++.+...+....|+|+|+|+|++|..-+-.+.     -+++..+...+.||+.+|.|+|
T Consensus        55 e~l~--rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~-----~ySEa~aSH~~rQiLeal~yCH  127 (355)
T KOG0033|consen   55 QKLE--REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-----FYSEADASHCIQQILEALAYCH  127 (355)
T ss_pred             HHHH--HHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence            5666  99999999999999999999999999999999999999976554332     5788888999999999999999


Q ss_pred             hcCCCCeEEecCCCCceeecCCCc-----------------------eecccCccccccccCCCCCchhhHHHHHHHHHH
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDNDK-----------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLE  220 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~~-----------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~e  220 (227)
                         .++|+|||+||+|+++.+...                       .+|||+|+|||++...+|+.++|||+-|++||-
T Consensus       128 ---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfi  204 (355)
T KOG0033|consen  128 ---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYI  204 (355)
T ss_pred             ---hcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHH
Confidence               999999999999999865321                       169999999999999999999999999999999


Q ss_pred             HHhCCCC
Q 040292          221 LLTGKKG  227 (227)
Q Consensus       221 l~tg~~p  227 (227)
                      ++.|.+|
T Consensus       205 LL~G~~P  211 (355)
T KOG0033|consen  205 LLVGYPP  211 (355)
T ss_pred             HHhCCCC
Confidence            9999988

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=6.1e-28  Score=195.51  Aligned_cols=146  Identities=23%  Similarity=0.425  Sum_probs=126.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.++..... +++.  +|+.++++++||||+++++++...+..++||||+++++|.+++....+   ..+++..+..++
T Consensus        35 iK~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~  109 (261)
T cd05068          35 VKTLKPGTMDPKDFL--AEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAG---RALKLPQLIDMA  109 (261)
T ss_pred             EEeeCCCcccHHHHH--HHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCC---CCCCHHHHHHHH
Confidence            7777654332 5677  999999999999999999999999999999999999999999976431   257899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ec---ccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IG---TFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g---~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.|+.|||   +++++|+||||+||++++++.+                   .+   +..|+|||++.+..++.++|
T Consensus       110 ~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05068         110 AQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSD  186 (261)
T ss_pred             HHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhh
Confidence            99999999999   9999999999999999876643                   11   23599999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|||++ |+.|
T Consensus       187 i~slG~~l~el~t~g~~p  204 (261)
T cd05068         187 VWSFGILLTEIVTYGRMP  204 (261)
T ss_pred             HHHHHHHHHHHHhcCCCC
Confidence            9999999999999 7765

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.95  E-value=8.7e-29  Score=207.71  Aligned_cols=145  Identities=19%  Similarity=0.231  Sum_probs=124.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.++..++|+||+++++++..++..|+||||+++|+|.+++.....    .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~----~l~~~~~  104 (331)
T cd05624          31 MKILNKWEMLKRAETACFR--EERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFED----RLPEDMA  104 (331)
T ss_pred             EEEEeHHHHHhhHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcC----CCCHHHH
Confidence            7777542111     3355  889999999999999999999999999999999999999999976332    6788889


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccC----
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITT----  202 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~----  202 (227)
                      ..++.|++.||+|||   +++++||||||+||+++.++.+                      .|++.|+|||++..    
T Consensus       105 ~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (331)
T cd05624         105 RFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDG  181 (331)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccC
Confidence            999999999999999   9999999999999999875532                      47889999999865    


Q ss_pred             -CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 -GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 -~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       ..++.++|+|||||++|+|++|+.|
T Consensus       182 ~~~~~~~~DiwSlGvil~ell~g~~P  207 (331)
T cd05624         182 MGKYGPECDWWSLGVCMYEMLYGETP  207 (331)
T ss_pred             CCCCCCcccEEeeehhhhhhhhCCCC
Confidence             4578899999999999999999987

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=8.9e-28  Score=194.50  Aligned_cols=144  Identities=21%  Similarity=0.406  Sum_probs=121.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +++.  +|+.++++++||||+++++++. ....++||||+++++|.+++.....    .+++..+..
T Consensus        27 vk~~~~~~~~~~~~~~~--~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~   99 (257)
T cd05115          27 IKVLKNENEKSVRDEMM--REAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKD----EITVSNVVE   99 (257)
T ss_pred             EEEcccccChHHHHHHH--HHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCC----CCCHHHHHH
Confidence            7777654332   4566  9999999999999999999885 4578899999999999999875432    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||.|||   +++++||||||+||+++.++.+                        .++..|+|||.+....++
T Consensus       100 ~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  176 (257)
T cd05115         100 LMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFS  176 (257)
T ss_pred             HHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCC
Confidence            9999999999999   8999999999999999876532                        113569999999888889


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++|+||||+++|++++ |+.|
T Consensus       177 ~~~Di~slG~~l~el~~~g~~p  198 (257)
T cd05115         177 SRSDVWSYGITMWEAFSYGQKP  198 (257)
T ss_pred             chhhHHHHHHHHHHHhcCCCCC
Confidence            99999999999999996 8776

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=6.7e-28  Score=195.77  Aligned_cols=144  Identities=26%  Similarity=0.369  Sum_probs=124.6

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.++.....  ..+.  +|+.+++.++||||+++++.+..++..++|+||+++++|.+++....     .+++.....+
T Consensus        39 ik~~~~~~~~~~~~~~--~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~  111 (267)
T cd06645          39 IKVIKLEPGEDFAVVQ--QEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG-----PLSESQIAYV  111 (267)
T ss_pred             EEEEecCchhHHHHHH--HHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcC-----CCCHHHHHHH
Confidence            7777654333  3455  89999999999999999999999999999999999999999987544     6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc---CCCCCc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT---TGNCNE  207 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~---~~~~~~  207 (227)
                      +.|++.|+.|||   +.+++|+||||+||+++.++.+                     .|+..|+|||++.   ...++.
T Consensus       112 ~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (267)
T cd06645         112 SRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQ  188 (267)
T ss_pred             HHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCc
Confidence            999999999999   8999999999999999865432                     4678899999874   345788


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+||++|+|++|+.|
T Consensus       189 ~~DvwSlG~il~~l~~~~~p  208 (267)
T cd06645         189 LCDIWAVGITAIELAELQPP  208 (267)
T ss_pred             hhhhHHHHHHHHHHhcCCCC
Confidence            99999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.95  E-value=5e-29  Score=208.88  Aligned_cols=145  Identities=21%  Similarity=0.282  Sum_probs=125.5

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++....     .+.+.  +|+.+++.++||||+++++++..++..++||||+++|+|.+++.....    .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~l~~~~~  104 (330)
T cd05601          31 MKVMKKSVLLAQETVSFFE--EERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYED----QFDEDMA  104 (330)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcC----CCCHHHH
Confidence            787765422     13455  899999999999999999999999999999999999999999976532    6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCcccccccc-----
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECIT-----  201 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~-----  201 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                      .||+.|+|||++.     
T Consensus       105 ~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (330)
T cd05601         105 QFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGD  181 (330)
T ss_pred             HHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhcccccc
Confidence            999999999999999   9999999999999999876532                      4788899999986     


Q ss_pred             -CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 -TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 -~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       ...++.++|||||||++|||++|+.|
T Consensus       182 ~~~~~~~~~DiwslG~il~el~~g~~P  208 (330)
T cd05601         182 GKGTYGVECDWWSLGVIAYEMIYGRSP  208 (330)
T ss_pred             ccCCCCCcceeecccceeeeeccCCCC
Confidence             34577899999999999999999987

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=9e-28  Score=199.49  Aligned_cols=144  Identities=19%  Similarity=0.335  Sum_probs=125.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   .++.  +|+.++.+++||||++++++|..++..++|+||+++++|.+++....     ++++..+..
T Consensus        31 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~-----~~~~~~~~~  103 (308)
T cd06615          31 RKLIHLEIKPAIRNQII--RELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-----RIPENILGK  103 (308)
T ss_pred             EEEeccccCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcC-----CCCHHHHHH
Confidence            5655543222   3455  99999999999999999999999999999999999999999997643     678899999


Q ss_pred             HHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.|++.||.|||   + .+++|+||+|+||++++++.+                   .++..|+|||++.+..++.++|
T Consensus       104 ~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D  180 (308)
T cd06615         104 ISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSD  180 (308)
T ss_pred             HHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccch
Confidence            9999999999999   6 589999999999999876532                   3677899999998878899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|+|++|+.|
T Consensus       181 iwslG~~l~~l~~g~~p  197 (308)
T cd06615         181 IWSLGLSLVEMAIGRYP  197 (308)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=5.9e-28  Score=201.06  Aligned_cols=148  Identities=20%  Similarity=0.297  Sum_probs=119.4

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCC----CCCcccCHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNG----SQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~----~~~~~l~~~~  147 (227)
                      +|.+........+.  +|+.++++++||||+++++++..  +...++|+||+. ++|.+++.....    .....+++..
T Consensus        33 iK~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~  109 (317)
T cd07868          33 LKQIEGTGISMSAC--REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGM  109 (317)
T ss_pred             EEEECCCCCcHHHH--HHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHH
Confidence            77776554445556  99999999999999999998865  345789999996 588887653211    1112588889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC----C------------------------ceecccCcccccc
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN----D------------------------KLIGTFGFIAPEC  199 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~----~------------------------~~~g~~~y~aPE~  199 (227)
                      +..++.|++.||.|||   +.+++||||||+||+++.+    +                        ...||+.|+|||+
T Consensus       110 ~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~  186 (317)
T cd07868         110 VKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL  186 (317)
T ss_pred             HHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHH
Confidence            9999999999999999   9999999999999999421    1                        1246788999999


Q ss_pred             ccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.+. .++.++|+||+||++|+|++|++|
T Consensus       187 ~~~~~~~~~~~DiwslG~il~el~~g~~~  215 (317)
T cd07868         187 LLGARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             HcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            9764 478999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.95  E-value=8.4e-28  Score=200.28  Aligned_cols=144  Identities=23%  Similarity=0.389  Sum_probs=122.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   +++.  +|+.+++.++||||++++|+|... ..++|+||+++|+|.+++.....    .+++.....
T Consensus        41 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~----~~~~~~~~~  113 (316)
T cd05108          41 IKELREATSPKANKEIL--DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD----NIGSQYLLN  113 (316)
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccc----cCCHHHHHH
Confidence            6777644332   4666  999999999999999999999764 57799999999999999976432    578888999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||+|||   +.+++||||||+||++++++.+                       .++..|+|||.+....++.
T Consensus       114 ~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  190 (316)
T cd05108         114 WCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTH  190 (316)
T ss_pred             HHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCc
Confidence            9999999999999   9999999999999999876533                       1234699999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++||||||+++||+++ |+.|
T Consensus       191 ~~Di~slGv~l~el~t~g~~p  211 (316)
T cd05108         191 QSDVWSYGVTVWELMTFGSKP  211 (316)
T ss_pred             hhhhHHHHHHHHHHHcCCCCC
Confidence            9999999999999998 7765

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=7.8e-28  Score=194.73  Aligned_cols=133  Identities=27%  Similarity=0.438  Sum_probs=120.2

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.++++++||||+++++++..++..++|+||+++++|.+++....     .+++..+..++.|++.||.||| 
T Consensus        50 ~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH-  121 (263)
T cd06625          50 ALE--CEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYG-----ALTETVTRKYTRQILEGVEYLH-  121 (263)
T ss_pred             HHH--HHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH-
Confidence            455  89999999999999999999999999999999999999999987543     6788889999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCCchhhHHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLE  220 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~e  220 (227)
                        +.+++|+||+|+||++++++.+                        .++..|+|||.+.+..++.++|+||+|+++||
T Consensus       122 --~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  199 (263)
T cd06625         122 --SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVE  199 (263)
T ss_pred             --hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHH
Confidence              9999999999999999876532                        24567999999998889999999999999999


Q ss_pred             HHhCCCC
Q 040292          221 LLTGKKG  227 (227)
Q Consensus       221 l~tg~~p  227 (227)
                      +++|+.|
T Consensus       200 l~~g~~p  206 (263)
T cd06625         200 MLTEKPP  206 (263)
T ss_pred             HHhCCCC
Confidence            9999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=2e-27  Score=192.15  Aligned_cols=143  Identities=23%  Similarity=0.388  Sum_probs=121.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.++.....    +++.  +|+.+++.++||||+++++++. .+..++||||+++|+|.+++....     .+++..+.
T Consensus        27 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~   98 (257)
T cd05116          27 VKILKNDNNDPALKDELL--REANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNK-----HVTEKNIT   98 (257)
T ss_pred             EEEccCCCCcHHHHHHHH--HHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcC-----CCCHHHHH
Confidence            7877654333    4566  9999999999999999999885 456789999999999999997543     67889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||.|||   +++++||||||+|+++++++.+                        .++..|+|||.+....+
T Consensus        99 ~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (257)
T cd05116          99 ELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKF  175 (257)
T ss_pred             HHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCc
Confidence            99999999999999   9999999999999999876532                        12357999999988888


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++|+||||+++|||++ |+.|
T Consensus       176 ~~~~Di~slG~~l~el~t~g~~p  198 (257)
T cd05116         176 SSKSDVWSFGVLMWEAFSYGQKP  198 (257)
T ss_pred             CchhHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999998 8876

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=6.5e-28  Score=206.86  Aligned_cols=129  Identities=21%  Similarity=0.359  Sum_probs=117.5

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+.+|++++||||+++++++......++|||++. ++|.+++....     .+++..+..++.|++.||.|||   ..+
T Consensus       135 ~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-----~l~~~~~~~i~~ql~~aL~~LH---~~g  205 (392)
T PHA03207        135 REIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSG-----PLPLEQAITIQRRLLEALAYLH---GRG  205 (392)
T ss_pred             HHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            89999999999999999999999999999999996 68988885432     6889999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      |+||||||+||+++.++.+                       .||+.|+|||++....++.++|||||||++|||++|+.
T Consensus       206 ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~  285 (392)
T PHA03207        206 IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV  285 (392)
T ss_pred             ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            9999999999999875432                       47889999999998889999999999999999999987


Q ss_pred             C
Q 040292          227 G  227 (227)
Q Consensus       227 p  227 (227)
                      |
T Consensus       286 p  286 (392)
T PHA03207        286 T  286 (392)
T ss_pred             C
Confidence            6

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=6.9e-28  Score=195.57  Aligned_cols=148  Identities=24%  Similarity=0.376  Sum_probs=125.3

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     ..+.  +|+.++++++||||+++++++...+..++|+||+++++|.+++....... ..+++..+
T Consensus        32 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~-~~~~~~~~  108 (267)
T cd08228          32 LKKVQIFEMMDAKARQDCV--KEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQK-RLIPERTV  108 (267)
T ss_pred             EEEeeccccCCHHHHHHHH--HHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhcc-CCCCHHHH
Confidence            7776542221     3455  89999999999999999999999999999999999999998885322111 25788889


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++++|+||+|+||+++.++.+                     .+++.|+|||.+.+..++.
T Consensus       109 ~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  185 (267)
T cd08228         109 WKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCc
Confidence            999999999999999   9999999999999999876533                     3667899999998888899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+|+++|||++|+.|
T Consensus       186 ~~Di~slG~~l~el~~g~~p  205 (267)
T cd08228         186 KSDIWSLGCLLYEMAALQSP  205 (267)
T ss_pred             hhhHHHHHHHHHHHhcCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.95  E-value=7.6e-28  Score=194.43  Aligned_cols=153  Identities=23%  Similarity=0.403  Sum_probs=127.2

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEee-CCcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      +...+..  +|.++.....+.+.  +|+.++++++|+|++++++++.. ++..++|+||+++++|.+++.....   ..+
T Consensus        25 ~~~~~~~~~~k~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~   99 (256)
T cd05082          25 GDYRGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVL   99 (256)
T ss_pred             EEEcCCcEEEEEeCCCchHHHHH--HHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCC---CCC
Confidence            4444444  77776554445677  99999999999999999998654 4568999999999999999875432   247


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ++..+..++.|++.||+|||   +++++||||||+||++++++.+                  .++..|+|||++....+
T Consensus       100 ~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  176 (256)
T cd05082         100 GGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF  176 (256)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceeecCHHHHccCCC
Confidence            88899999999999999999   9999999999999999877643                  12346999999988889


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++|+|||||++|+|++ |+.|
T Consensus       177 ~~~~Dv~slG~i~~~l~~~g~~p  199 (256)
T cd05082         177 STKSDVWSFGILLWEIYSFGRVP  199 (256)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCC
Confidence            999999999999999997 7765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.95  E-value=1e-27  Score=195.88  Aligned_cols=143  Identities=24%  Similarity=0.368  Sum_probs=125.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+.++++++||||+++++++..++..++|+||+++++|.+++...      ++++..+..
T Consensus        34 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~  105 (277)
T cd06642          34 IKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG------PLEETYIAT  105 (277)
T ss_pred             EEEeccccchHHHHHHH--HHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcC------CCCHHHHHH
Confidence            7776644322   3566  9999999999999999999999999999999999999999988642      578889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++.|++.|+.|||   +++++|+||+|+||++++++.+                     .++..|+|||.+.+..++.++
T Consensus       106 ~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  182 (277)
T cd06642         106 ILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKA  182 (277)
T ss_pred             HHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhh
Confidence            9999999999999   9999999999999999876533                     356779999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||||+++|||++|+.|
T Consensus       183 Dv~slG~il~el~tg~~p  200 (277)
T cd06642         183 DIWSLGITAIELAKGEPP  200 (277)
T ss_pred             hHHHHHHHHHHHHhCCCC
Confidence            999999999999999876

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=2.1e-27  Score=190.91  Aligned_cols=145  Identities=26%  Similarity=0.452  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.++++++||||+++++++...+..++||||+++++|.+++.....    .+++..+..
T Consensus        24 ~K~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~   97 (250)
T cd05085          24 VKTCKEDLPQELKIKFL--SEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKD----ELKTKQLVK   97 (250)
T ss_pred             EEecCCcCCHHHHHHHH--HHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCC----CCCHHHHHH
Confidence            7766654332   3455  999999999999999999999999999999999999999999865432    578899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.+|.|+|   +++++|+||+|+|+++++++.+                      .+++.|+|||++....++.+
T Consensus        98 ~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  174 (250)
T cd05085          98 FALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSE  174 (250)
T ss_pred             HHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCch
Confidence            9999999999999   9999999999999999876543                      12345999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +|+||||+++|++++ |..|
T Consensus       175 ~Di~slG~ll~~~~~~g~~p  194 (250)
T cd05085         175 SDVWSYGILLWETFSLGVCP  194 (250)
T ss_pred             hHHHHHHHHHHHHhcCCCCC
Confidence            999999999999998 7765

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.95  E-value=1.6e-27  Score=197.99  Aligned_cols=144  Identities=19%  Similarity=0.357  Sum_probs=122.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   ..+.  +|+.++++++||||+++++++..++..++||||++ ++|.+++.....    .+++..+..
T Consensus        36 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~  108 (309)
T cd07872          36 LKEIRLEHEEGAPCTAI--REVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQYMDDCGN----IMSMHNVKI  108 (309)
T ss_pred             EEEeeccccCCcchhHH--HHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-CCHHHHHHhcCC----CCCHHHHHH
Confidence            7877644322   2445  89999999999999999999999999999999997 588888765432    578888999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~~  208 (227)
                      ++.|++.||.|||   +++++||||||+||+++.++.+                     .+++.|+|||.+.+ ..++.+
T Consensus       109 ~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  185 (309)
T cd07872         109 FLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQ  185 (309)
T ss_pred             HHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcH
Confidence            9999999999999   9999999999999999876532                     35778999998865 457899


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+||++|+|+||++|
T Consensus       186 ~DiwslG~il~el~tg~~p  204 (309)
T cd07872         186 IDMWGVGCIFFEMASGRPL  204 (309)
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999876

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=3.4e-28  Score=209.11  Aligned_cols=135  Identities=31%  Similarity=0.470  Sum_probs=122.0

Q ss_pred             ccccchhHHHHHhcCCCcccceeEEEEeeCCc--ceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHH
Q 040292           84 EEYYCFNCIAFASQMSHKNILKFVGCCLETEV--PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAY  161 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~  161 (227)
                      +.|.  .|+.+|+.|+|||||++|.+|.+...  ..+|+|.++.|+|..|....+     .++.+....|++||+.||.|
T Consensus        86 eR~~--~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~-----~vn~kaik~W~RQILkGL~y  158 (632)
T KOG0584|consen   86 ERLY--SEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHR-----RVNIKAIKSWCRQILKGLVY  158 (632)
T ss_pred             HHHH--HHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhc-----cCCHHHHHHHHHHHHHHhhh
Confidence            6788  99999999999999999999988665  669999999999999998765     67888999999999999999


Q ss_pred             hhhcCCCCeEEecCCCCceeecCCC--------------------ceecccCccccccccCCCCCchhhHHHHHHHHHHH
Q 040292          162 LHVGFSRPIVFRDIKPFTTHVNDND--------------------KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL  221 (227)
Q Consensus       162 LH~~~~~~i~H~dlkp~nil~~~~~--------------------~~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el  221 (227)
                      ||+. +++|+|||||.+||+++-+.                    .++|||.|||||... ..|+...||||||++++||
T Consensus       159 LHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEM  236 (632)
T KOG0584|consen  159 LHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEM  236 (632)
T ss_pred             hhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHH
Confidence            9976 78999999999999997542                    237999999999887 6799999999999999999


Q ss_pred             HhCCCC
Q 040292          222 LTGKKG  227 (227)
Q Consensus       222 ~tg~~p  227 (227)
                      +|+..|
T Consensus       237 vT~eYP  242 (632)
T KOG0584|consen  237 VTSEYP  242 (632)
T ss_pred             HhccCC
Confidence            999877

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.95  E-value=1.6e-27  Score=192.76  Aligned_cols=169  Identities=22%  Similarity=0.388  Sum_probs=135.4

Q ss_pred             ccHHHHHHhhcCCCCCC-eeecCCC---eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecc
Q 040292           50 FIALELEGATNNYDPGK-GFLQDHP---ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFV  123 (227)
Q Consensus        50 ~~~~~l~~~~~~f~~~~-~~~~~~~---vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~  123 (227)
                      |.+.+.... ++|.... +...+..   +|.+......  +++.  +|+.+++.++||||+++++++...+..++||||+
T Consensus         8 y~~~~~ig~-g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           8 FTLERKLGS-GYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQ--KEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHhhhhcc-CCCccEEEeEecCCCcEEEEeccccchhhHHHHH--HHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            444444433 3333332 4443333   7777655442  5666  9999999999999999999999999999999999


Q ss_pred             cCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------
Q 040292          124 ACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------  188 (227)
Q Consensus       124 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------  188 (227)
                      ++++|.+++.....   ..+++..+..++.|++.||.|||   +++++|+||+|+|+++++++.+               
T Consensus        85 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~  158 (261)
T cd05148          85 EKGSLLAFLRSPEG---QVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV  158 (261)
T ss_pred             ccCCHHHHHhcCCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence            99999999976432   25788999999999999999999   8999999999999999876543               


Q ss_pred             ------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 ------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 ------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                            .++..|++||......++.++|+||||+++|+|++ |+.|
T Consensus       159 ~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p  204 (261)
T cd05148         159 YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVP  204 (261)
T ss_pred             ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence                  12346999999988889999999999999999998 6665

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=1.2e-27  Score=193.01  Aligned_cols=141  Identities=28%  Similarity=0.522  Sum_probs=120.7

Q ss_pred             eEEEcCCCC-cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLN-TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+..... ...|.  +|+.++++++||||+++++++.. ...++|+||+++|+|.+++.....    .+++..+..++
T Consensus        35 ~k~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~  107 (259)
T cd05037          35 LKVLGSDHRDSLAFF--ETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKN----NVSLHWKLDVA  107 (259)
T ss_pred             eeccccchhhHHHHH--HHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhcc----CCCHHHHHHHH
Confidence            555544333 35666  99999999999999999999988 778999999999999999976542    57888999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-------ce-----------------ecccCccccccccCC--CCC
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-------KL-----------------IGTFGFIAPECITTG--NCN  206 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-------~~-----------------~g~~~y~aPE~~~~~--~~~  206 (227)
                      .|++.||.|||   +.+++||||||+||+++.++       .+                 .++..|+|||++...  .++
T Consensus       108 ~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  184 (259)
T cd05037         108 KQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLT  184 (259)
T ss_pred             HHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcCCCCCcc
Confidence            99999999999   99999999999999998766       11                 356779999999776  688


Q ss_pred             chhhHHHHHHHHHHHHhC
Q 040292          207 EKSDVYSFGALLLELLTG  224 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg  224 (227)
                      .++|+||||+++|++++|
T Consensus       185 ~~~Di~slG~~~~~l~~~  202 (259)
T cd05037         185 IAADKWSFGTTLLEICSN  202 (259)
T ss_pred             hhhHHHHHHHHHHHHHhC
Confidence            999999999999999995

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-28  Score=212.60  Aligned_cols=135  Identities=22%  Similarity=0.353  Sum_probs=124.6

Q ss_pred             ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhh
Q 040292           84 EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH  163 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH  163 (227)
                      ++|.  -||.+|..+.||+||++++.|+.++.+++..|||.||.....+-..+.    ++++.++..++.|++.||+|||
T Consensus        74 EDyl--VEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r----~LtE~QIqvvc~q~ldALn~LH  147 (1187)
T KOG0579|consen   74 EDYL--VEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGR----VLTEDQIQVVCYQVLDALNWLH  147 (1187)
T ss_pred             hhhh--hhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhcc----ccchHHHHHHHHHHHHHHHHHh
Confidence            6777  999999999999999999999999999999999999999998877664    7999999999999999999999


Q ss_pred             hcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc-----CCCCCchhhHHHHHHH
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT-----TGNCNEKSDVYSFGAL  217 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~-----~~~~~~~~DvwS~G~i  217 (227)
                         +++|+|||||..|||++-+|.+                     +|||+|||||+..     +.+|+.++||||||++
T Consensus       148 ---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGIT  224 (1187)
T KOG0579|consen  148 ---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGIT  224 (1187)
T ss_pred             ---hcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhH
Confidence               9999999999999999877654                     7999999999874     4568999999999999


Q ss_pred             HHHHHhCCCC
Q 040292          218 LLELLTGKKG  227 (227)
Q Consensus       218 l~el~tg~~p  227 (227)
                      |.||..+.+|
T Consensus       225 LIEMAqiEPP  234 (1187)
T KOG0579|consen  225 LIEMAQIEPP  234 (1187)
T ss_pred             HHHHhccCCC
Confidence            9999999987

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.95  E-value=1.4e-27  Score=195.54  Aligned_cols=145  Identities=23%  Similarity=0.342  Sum_probs=123.0

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.+++.++||||+++++++..++..++|+||+++++|.+++.....    ++++..+..+
T Consensus        35 ~k~~~~~~~~~~~~~~--~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~----~l~~~~~~~~  108 (282)
T cd06643          35 AKVIDTKSEEELEDYM--VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER----PLTEPQIRVV  108 (282)
T ss_pred             EEEeCCCCHHHHHHHH--HHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCC----CCCHHHHHHH
Confidence            5555433222  4566  899999999999999999999999999999999999999988765332    6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc-----CCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT-----TGNC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~-----~~~~  205 (227)
                      +.|++.||.|||   +.+++||||+|+||+++.++.+                     .+++.|+|||++.     ...+
T Consensus       109 ~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (282)
T cd06643         109 CKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY  185 (282)
T ss_pred             HHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCC
Confidence            999999999999   9999999999999999876533                     3677899999984     3346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+|||||++|+|++|++|
T Consensus       186 ~~~~Dv~slGvil~el~~g~~p  207 (282)
T cd06643         186 DYKADVWSLGITLIEMAQIEPP  207 (282)
T ss_pred             CccchhhhHHHHHHHHccCCCC
Confidence            7899999999999999999987

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.95  E-value=9.3e-28  Score=194.81  Aligned_cols=148  Identities=24%  Similarity=0.357  Sum_probs=126.3

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +++.  +|+.+++.++||||+++++++..++..+++|||+++++|.+++...... ...+++..+
T Consensus        32 vK~~~~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~-~~~~~~~~~  108 (267)
T cd08229          32 LKKVQIFDLMDAKARADCI--KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ-KRLIPEKTV  108 (267)
T ss_pred             EEeeeehhhhhHHHHHHHH--HHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhcc-CCCCCHHHH
Confidence            7776543221     3566  9999999999999999999999999999999999999999988642211 126789999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++++|+||+|+||+++.++.+                     .++..|+|||++.+..++.
T Consensus       109 ~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~  185 (267)
T cd08229         109 WKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccc
Confidence            999999999999999   9999999999999999876533                     4667899999998888899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|++|..|
T Consensus       186 ~~Dv~slG~il~~l~~g~~p  205 (267)
T cd08229         186 KSDIWSLGCLLYEMAALQSP  205 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.95  E-value=9.9e-28  Score=203.30  Aligned_cols=143  Identities=29%  Similarity=0.433  Sum_probs=128.3

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+......     +...  +|+.+|+++. |||||.+++++......++|||++.||.|.+.+...      .+++..
T Consensus        65 ~K~i~k~~~~~~~~~~~v~--~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~------~~sE~d  136 (382)
T KOG0032|consen   65 CKVIPKRKLRGKEDREDVR--REVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK------HYSERD  136 (382)
T ss_pred             EEEeehhhccccccHHHHH--HHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc------cCCHHH
Confidence            7777654432     3556  9999999997 999999999999999999999999999999999764      288999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc------------------------eecccCccccccccCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------LIGTFGFIAPECITTG  203 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~------------------------~~g~~~y~aPE~~~~~  203 (227)
                      +..++.|++.++.|||   +.+++||||||+|+++.....                        ++||++|+|||++...
T Consensus       137 a~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~  213 (382)
T KOG0032|consen  137 AAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGR  213 (382)
T ss_pred             HHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCC
Confidence            9999999999999999   999999999999999875421                        2799999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .|+..+|+||+|+++|.|++|.+|
T Consensus       214 ~y~~~~DiWS~Gvi~yiLL~G~~P  237 (382)
T KOG0032|consen  214 PYGDEVDVWSIGVILYILLSGVPP  237 (382)
T ss_pred             CCCcccchhHHHHHHHHHhhCCCC
Confidence            999999999999999999999988

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.4e-27  Score=191.59  Aligned_cols=145  Identities=25%  Similarity=0.362  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..+++|||+++++|.+++.....    ++++..+..+
T Consensus        33 ik~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~----~l~~~~~~~~  106 (262)
T cd06613          33 IKVIKLEPGDDFEIIQ--QEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRG----PLSELQIAYV  106 (262)
T ss_pred             EEEEEcCchhhHHHHH--HHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhcc----CCCHHHHHHH
Confidence            7777654333  4566  999999999999999999999999999999999999999999876522    6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC---CCCc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG---NCNE  207 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~---~~~~  207 (227)
                      +.|++.||.|||   +.+++|+||+|+||++++++.+                     .++..|+|||.+...   .++.
T Consensus       107 ~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~  183 (262)
T cd06613         107 CRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDG  183 (262)
T ss_pred             HHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCc
Confidence            999999999999   9999999999999999976533                     356679999998776   7889


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|++|++|
T Consensus       184 ~~Di~slG~~l~~~~tg~~p  203 (262)
T cd06613         184 KCDIWALGITAIELAELQPP  203 (262)
T ss_pred             hhhhHHHHHHHHHHHhCCCC
Confidence            99999999999999999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.95  E-value=1.3e-27  Score=197.49  Aligned_cols=149  Identities=21%  Similarity=0.378  Sum_probs=123.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      +|.++.....   +.+.  +|+.++.++ +||||+++++++...+..++|+||+++++|.+++......           
T Consensus        34 ik~~~~~~~~~~~~~~~--~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  111 (297)
T cd05089          34 IKMLKEFASENDHRDFA--GELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHG  111 (297)
T ss_pred             EEEccccCCHHHHHHHH--HHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccC
Confidence            6666543222   4566  999999999 7999999999999999999999999999999998653210           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPE  198 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE  198 (227)
                      ....+++..+..++.|++.||+|||   +++++||||||+|++++.++..                    ..+..|+|||
T Consensus       112 ~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  188 (297)
T cd05089         112 TASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIE  188 (297)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCch
Confidence            1125788899999999999999999   9999999999999999876432                    1134599999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.....++.++|||||||++|||++ |..|
T Consensus       189 ~~~~~~~~~~~DvwSlG~il~el~t~g~~p  218 (297)
T cd05089         189 SLNYSVYTTKSDVWSFGVLLWEIVSLGGTP  218 (297)
T ss_pred             hhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            9988889999999999999999997 8765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.95  E-value=1.1e-27  Score=205.89  Aligned_cols=149  Identities=20%  Similarity=0.378  Sum_probs=123.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||.++.....   +.+.  +|+.+|+++. ||||++++++|...+..++||||+++|+|.+++......           
T Consensus        72 vK~l~~~~~~~~~~~~~--~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~  149 (400)
T cd05105          72 VKMLKPTARSSEKQALM--SELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKK  149 (400)
T ss_pred             EEecCCCCChHHHHHHH--HHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccc
Confidence            7888654332   4566  9999999995 999999999999999999999999999999887542100           


Q ss_pred             --------------------------------------------------------------------------------
Q 040292          139 --------------------------------------------------------------------------------  138 (227)
Q Consensus       139 --------------------------------------------------------------------------------  138 (227)
                                                                                                      
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  229 (400)
T cd05105         150 DLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDD  229 (400)
T ss_pred             cccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhc
Confidence                                                                                            


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||+|||   +.+++||||||+||++++++.+                       .+++.|+
T Consensus       230 ~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~  306 (400)
T cd05105         230 GSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWM  306 (400)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceE
Confidence            0124677888999999999999999   9999999999999999876432                       2446799


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||.+.+..++.++|||||||++|||++ |..|
T Consensus       307 aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P  339 (400)
T cd05105         307 APESIFDNLYTTLSDVWSYGILLWEIFSLGGTP  339 (400)
T ss_pred             ChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            9999988889999999999999999997 7655

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=1.4e-27  Score=198.56  Aligned_cols=148  Identities=20%  Similarity=0.304  Sum_probs=118.9

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCC----CCCcccCHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNG----SQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~----~~~~~l~~~~  147 (227)
                      +|.+........+.  +|+.++++++||||+++++++..  +...++|+||+. ++|.+++.....    .....+++..
T Consensus        33 ~k~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~  109 (317)
T cd07867          33 LKQIEGTGISMSAC--REIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSM  109 (317)
T ss_pred             EEEecCCCCcHHHH--HHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHH
Confidence            77776554445566  99999999999999999999864  456789999996 578777643211    1122578888


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC----CCc------------------------eecccCcccccc
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----NDK------------------------LIGTFGFIAPEC  199 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~----~~~------------------------~~g~~~y~aPE~  199 (227)
                      +..++.|++.||.|||   +.+++||||||+||++..    ++.                        ..+|+.|+|||.
T Consensus       110 ~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~  186 (317)
T cd07867         110 VKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL  186 (317)
T ss_pred             HHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHH
Confidence            9999999999999999   999999999999999832    211                        146778999999


Q ss_pred             ccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.+. .++.++|||||||++|||+||++|
T Consensus       187 ~~~~~~~~~~~DiwSlG~il~el~tg~~~  215 (317)
T cd07867         187 LLGARHYTKAIDIWAIGCIFAELLTSEPI  215 (317)
T ss_pred             hcCCCccCcHHHHHhHHHHHHHHHhCCCC
Confidence            8764 478999999999999999999876

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.95  E-value=2.2e-27  Score=195.50  Aligned_cols=145  Identities=21%  Similarity=0.325  Sum_probs=123.2

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++.+..++..++||||+++++|..++.....    .+++..+..+
T Consensus        42 ~k~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~----~l~~~~~~~~  115 (292)
T cd06644          42 AKVIETKSEEELEDYM--VEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDR----GLTEPQIQVI  115 (292)
T ss_pred             EEEeccCCHHHHHHHH--HHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcC----CCCHHHHHHH
Confidence            6666544332  4566  899999999999999999999999999999999999999888765332    6789999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc-----CCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT-----TGNC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~-----~~~~  205 (227)
                      +.|++.||.|||   +.+++||||+|+||+++.++.+                     .+++.|+|||++.     ...+
T Consensus       116 ~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  192 (292)
T cd06644         116 CRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPY  192 (292)
T ss_pred             HHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCC
Confidence            999999999999   9999999999999999865432                     3567899999884     3346


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+|||||++|+|++|..|
T Consensus       193 ~~~~Dv~slG~il~el~~g~~p  214 (292)
T cd06644         193 DYKADIWSLGITLIEMAQIEPP  214 (292)
T ss_pred             CchhhhHhHHHHHHHHhcCCCC
Confidence            7899999999999999999876

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=1.9e-27  Score=193.08  Aligned_cols=144  Identities=26%  Similarity=0.361  Sum_probs=123.8

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  ..+.  +|+.++++++||||+++++++..++..++|+||+++++|.+++....     ++++..+..+
T Consensus        39 ik~~~~~~~~~~~~~~--~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~  111 (267)
T cd06646          39 VKIIKLEPGDDFSLIQ--QEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG-----PLSELQIAYV  111 (267)
T ss_pred             EEEEecCccchHHHHH--HHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHHHHHH
Confidence            7777654332  3455  89999999999999999999999999999999999999999887543     6788999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc---CCCCCc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT---TGNCNE  207 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~---~~~~~~  207 (227)
                      +.|++.||.|||   +.+++|||++|+|+++++++.+                     .+++.|+|||.+.   ...++.
T Consensus       112 ~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~  188 (267)
T cd06646         112 CRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQ  188 (267)
T ss_pred             HHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcc
Confidence            999999999999   8999999999999999876532                     3567899999884   334778


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|||++|+.|
T Consensus       189 ~~Dvws~G~il~el~~g~~p  208 (267)
T cd06646         189 LCDIWAVGITAIELAELQPP  208 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.95  E-value=2.2e-27  Score=194.56  Aligned_cols=149  Identities=22%  Similarity=0.399  Sum_probs=124.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC------------C
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG------------S  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~------------~  138 (227)
                      +|.+......   .++.  +|+.++++++||||+++++++..++..++||||+++++|.+++.....            .
T Consensus        39 ik~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  116 (283)
T cd05090          39 IKTLKDINNPQQWGEFQ--QEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGT  116 (283)
T ss_pred             EEeccCCCCHHHHHHHH--HHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccc
Confidence            7777644333   3566  999999999999999999999999999999999999999999853221            0


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++.....++.|++.||.|||   +++++||||||+|+++++++.+                       .++..|+
T Consensus       117 ~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~  193 (283)
T cd05090         117 VKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWM  193 (283)
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceec
Confidence            0124788889999999999999999   9999999999999999876533                       1234599


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||++.+..++.++|+||||+++|||++ |..|
T Consensus       194 aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p  226 (283)
T cd05090         194 PPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP  226 (283)
T ss_pred             ChHHhccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence            9999988889999999999999999998 7665

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=1.2e-27  Score=196.71  Aligned_cols=146  Identities=21%  Similarity=0.343  Sum_probs=125.8

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     ..+.  +|+.++++++|+|++.+++.+...+..++||||+++++|.+++.....   ..+++..+
T Consensus        30 vK~~~~~~~~~~~~~~~~~--~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~---~~l~~~~~  104 (285)
T cd05630          30 CKKLEKKRIKKRKGESMAL--NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGE---AGFEEGRA  104 (285)
T ss_pred             EEEEehhhccchHHHHHHH--HHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcc---cCCCHHHH
Confidence            7777543222     2344  899999999999999999999999999999999999999998864321   25788899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||.|||   +.+++||||||+||++++++.+                    .|+..|+|||++....++.+
T Consensus       105 ~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  181 (285)
T cd05630         105 VFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS  181 (285)
T ss_pred             HHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCc
Confidence            999999999999999   9999999999999999875432                    46788999999988889999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|+|++|+.|
T Consensus       182 ~DiwslG~~l~~l~~g~~P  200 (285)
T cd05630         182 PDWWALGCLLYEMIAGQSP  200 (285)
T ss_pred             cccHHHHHHHHHHHhCCCC
Confidence            9999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.95  E-value=1.5e-27  Score=194.92  Aligned_cols=149  Identities=21%  Similarity=0.403  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----CCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----QLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~  145 (227)
                      ||.+......   .++.  +|+.+++.++||||+++++++..+...++||||+++++|.+++......     ....+++
T Consensus        41 ik~~~~~~~~~~~~~~~--~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  118 (277)
T cd05062          41 IKTVNEAASMRERIEFL--NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSL  118 (277)
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCH
Confidence            7776543322   3466  9999999999999999999999999999999999999999998653210     0124677


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..+..++.|++.||.|||   +.+++|+||||+||++++++.+                       .+++.|+|||.+.+
T Consensus       119 ~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05062         119 KKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  195 (277)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc
Confidence            888999999999999999   8999999999999999976543                       12456999999988


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..++.++|+||||+++|||++ |..|
T Consensus       196 ~~~~~~~Di~slG~~l~el~~~~~~p  221 (277)
T cd05062         196 GVFTTYSDVWSFGVVLWEIATLAEQP  221 (277)
T ss_pred             CCcCchhHHHHHHHHHHHHHcCCCCC
Confidence            889999999999999999999 5554

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.2e-27  Score=193.51  Aligned_cols=143  Identities=24%  Similarity=0.351  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.++++++|||++++.+++..+...++|+||+++++|.+++...      ++++..+..
T Consensus        31 ik~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~------~~~~~~~~~  102 (274)
T cd06609          31 IKVIDLEEAEDEIEDIQ--QEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG------KLDETYIAF  102 (274)
T ss_pred             EEEeeccccchHHHHHH--HHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc------CCCHHHHHH
Confidence            7777654322   3556  9999999999999999999999999999999999999999998753      578899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++.|++.|+.|||   +.+++|+||+|+|+++++++.+                     .+++.|+|||.+.+..++.++
T Consensus       103 ~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~s  179 (274)
T cd06609         103 ILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKA  179 (274)
T ss_pred             HHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchh
Confidence            9999999999999   9999999999999999876532                     356679999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||||+++|+|+||+.|
T Consensus       180 Dv~slG~il~~l~tg~~p  197 (274)
T cd06609         180 DIWSLGITAIELAKGEPP  197 (274)
T ss_pred             hHHHHHHHHHHHHhCCCC
Confidence            999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.95  E-value=2.1e-29  Score=220.76  Aligned_cols=145  Identities=22%  Similarity=0.404  Sum_probs=128.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++..-..   .+|.  .|+.+|.+++||||++|.|+.....+.++|.|||++|+|..+|+.+.+    .+.+-+...
T Consensus       662 IKTLK~GytekqrrdFL--~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG----qftviQLVg  735 (996)
T KOG0196|consen  662 IKTLKAGYTEKQRRDFL--SEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG----QFTVIQLVG  735 (996)
T ss_pred             EeeeccCccHHHHhhhh--hhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC----ceEeehHHH
Confidence            8888865433   5788  999999999999999999999999999999999999999999998765    688899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      .+++||.|++||.   +.+.+||||.++|||++.+-.+                        .-...|.|||.+...+++
T Consensus       736 MLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFT  812 (996)
T KOG0196|consen  736 MLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFT  812 (996)
T ss_pred             HHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccC
Confidence            9999999999999   9999999999999999875332                        112469999999999999


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..|||||||+++||.++ |.+|
T Consensus       813 sASDVWSyGIVmWEVmSyGERP  834 (996)
T KOG0196|consen  813 SASDVWSYGIVMWEVMSYGERP  834 (996)
T ss_pred             chhhccccceEEEEecccCCCc
Confidence            99999999999999765 6665

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.95  E-value=2.1e-27  Score=194.58  Aligned_cols=149  Identities=23%  Similarity=0.444  Sum_probs=124.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC----------CCCc
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG----------SQLE  141 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~----------~~~~  141 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..+++|||+++++|.+++.....          ....
T Consensus        40 ~k~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~  117 (280)
T cd05092          40 VKALKEASESARQDFQ--REAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPG  117 (280)
T ss_pred             EEecCcCCHHHHHHHH--HHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCcc
Confidence            5665543333  4566  999999999999999999999999999999999999999999875421          0112


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPE  198 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE  198 (227)
                      .+++..+..++.|++.|++|||   +.+++||||||+||++++++.+                       .+++.|+|||
T Consensus       118 ~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (280)
T cd05092         118 QLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE  194 (280)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHH
Confidence            4788999999999999999999   9999999999999999876533                       1245699999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+.+..++.++|+|||||++|||++ |++|
T Consensus       195 ~~~~~~~~~~~Di~slG~il~el~~~g~~p  224 (280)
T cd05092         195 SILYRKFTTESDIWSFGVVLWEIFTYGKQP  224 (280)
T ss_pred             HhccCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence            9988889999999999999999998 7765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-28  Score=208.65  Aligned_cols=142  Identities=22%  Similarity=0.391  Sum_probs=124.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   .+|.  +||++|.+++|||||+++|+|..+++.++|+|||++|+|..++......   .........
T Consensus       567 VK~Lr~~a~~~~r~~F~--kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheap---t~~t~~~vs  641 (807)
T KOG1094|consen  567 VKILRPDATKNARNDFL--KEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELP---TAETAPGVS  641 (807)
T ss_pred             EeecCcccchhHHHHHH--HHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCc---ccccchhHH
Confidence            8888877665   4677  9999999999999999999999999999999999999999999865321   234456678


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.||+.|++||.   +.+++|||+.+.|+|++.+..+                       +-...|||+|.+..++++.
T Consensus       642 i~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFtt  718 (807)
T KOG1094|consen  642 ICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTT  718 (807)
T ss_pred             HHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccc
Confidence            9999999999999   9999999999999999987644                       3446799999999999999


Q ss_pred             hhhHHHHHHHHHHHHh
Q 040292          208 KSDVYSFGALLLELLT  223 (227)
Q Consensus       208 ~~DvwS~G~il~el~t  223 (227)
                      ++|+|+||+++||+++
T Consensus       719 aSDvWafgvTlwE~~~  734 (807)
T KOG1094|consen  719 ASDVWAFGVTLWEVFM  734 (807)
T ss_pred             hhhhhhhHHHHHHHHH
Confidence            9999999999999865

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=2.1e-27  Score=206.96  Aligned_cols=129  Identities=22%  Similarity=0.318  Sum_probs=116.5

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+.+|++++||||+++++++..++..++|||++. ++|.+++.....    .+++..+..++.|++.||.|||   +++
T Consensus       209 ~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~yLH---~~g  280 (461)
T PHA03211        209 HEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLR----PLGLAQVTAVARQLLSAIDYIH---GEG  280 (461)
T ss_pred             HHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            89999999999999999999999999999999995 789888865432    6899999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      |+||||||+||+++.++.+                       .||+.|+|||++.+..++.++|||||||++|||++|..
T Consensus       281 IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~  360 (461)
T PHA03211        281 IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTA  360 (461)
T ss_pred             EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCC
Confidence            9999999999999875422                       47889999999998889999999999999999998764

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.95  E-value=2.6e-27  Score=193.98  Aligned_cols=144  Identities=21%  Similarity=0.376  Sum_probs=120.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   .++.  +|+..+++++||||+++++++. +...++++||+++|+|.+++.....    .+++..+..
T Consensus        41 ~k~~~~~~~~~~~~~~~--~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~----~~~~~~~~~  113 (279)
T cd05111          41 IKTIQDRSGRQTFQEIT--DHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRD----SLDPQRLLN  113 (279)
T ss_pred             EeecccccchHHHHHHH--HHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhccc----CCCHHHHHH
Confidence            5666433322   3445  7888999999999999999885 4567899999999999999975432    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +++++||||||+||+++.++.+                       .++..|+|||.+.+..++.
T Consensus       114 i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~  190 (279)
T cd05111         114 WCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTH  190 (279)
T ss_pred             HHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCc
Confidence            9999999999999   8999999999999999876532                       2345799999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|+||||+++||+++ |+.|
T Consensus       191 ~~Dv~slG~il~el~t~g~~p  211 (279)
T cd05111         191 QSDVWSYGVTVWEMMSYGAEP  211 (279)
T ss_pred             hhhHHHHHHHHHHHHcCCCCC
Confidence            9999999999999998 8765

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9.6e-29  Score=214.69  Aligned_cols=145  Identities=30%  Similarity=0.469  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCccc--CHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPF--LMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l--~~~~~~  149 (227)
                      ||.+......  +...  .||++.++|+|+|||+++|.|.+++..-+.||-.+||||.+++.+..+    |+  ++...-
T Consensus       605 IKEIpekdsr~~QPLh--EEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWG----PlKDNEstm~  678 (1226)
T KOG4279|consen  605 IKEIPEKDSREVQPLH--EEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWG----PLKDNESTMN  678 (1226)
T ss_pred             eeecccccchhhccHH--HHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccC----CCccchhHHH
Confidence            6666544433  4556  999999999999999999999999999999999999999999998776    66  677778


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc----------------------eecccCccccccccCCC--C
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK----------------------LIGTFGFIAPECITTGN--C  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~----------------------~~g~~~y~aPE~~~~~~--~  205 (227)
                      .+..||++||.|||   ++.|+|||||-+|+|++.-..                      ..||..|||||++..+.  |
T Consensus       679 fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGY  755 (1226)
T KOG4279|consen  679 FYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGY  755 (1226)
T ss_pred             HHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCC
Confidence            89999999999999   999999999999999964211                      25899999999997664  8


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..+|||||||+..||.||++|
T Consensus       756 G~aADIWS~GCT~vEMATGrPP  777 (1226)
T KOG4279|consen  756 GKAADIWSFGCTMVEMATGRPP  777 (1226)
T ss_pred             CchhhhhhccceeEeeccCCCC
Confidence            9999999999999999999998

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=2.1e-27  Score=195.20  Aligned_cols=145  Identities=19%  Similarity=0.329  Sum_probs=119.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC---CCcccceeEEEEee-----CCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM---SHKNILKFVGCCLE-----TEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.++.....    ..+.  +|+.+++.+   +||||++++++|..     ....++||||+. ++|.+++.....   .
T Consensus        32 vK~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~  105 (290)
T cd07862          32 LKRVRVQTGEEGMPLSTI--REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE---P  105 (290)
T ss_pred             EEEEecccCCCCchHHHH--HHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCC---C
Confidence            7777654332    2344  787777665   69999999999853     345789999996 699998865322   2


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~  201 (227)
                      .+++..+..++.|++.||.|||   +++++||||||+||+++.++.+                    .|++.|+|||.+.
T Consensus       106 ~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (290)
T cd07862         106 GVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL  182 (290)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcccccccccccccChHHHh
Confidence            5788999999999999999999   9999999999999999876532                    4688899999998


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ...++.++|||||||++|||++|++|
T Consensus       183 ~~~~~~~~DiwslG~il~el~~g~~~  208 (290)
T cd07862         183 QSSYATPVDLWSVGCIFAEMFRRKPL  208 (290)
T ss_pred             CCCCCCccchHHHHHHHHHHHcCCCC
Confidence            88899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=2.7e-27  Score=193.81  Aligned_cols=140  Identities=23%  Similarity=0.351  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +++.  +|+.++++++||||+++++.+...+..++|+||+++++|..+.         .+++..+..
T Consensus        31 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~---------~~~~~~~~~   99 (279)
T cd06619          31 VKVIPLDITVELQKQIM--SELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYR---------KIPEHVLGR   99 (279)
T ss_pred             EEEEecCCChHHHHHHH--HHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhh---------cCCHHHHHH
Confidence            7777544322   4566  9999999999999999999999999999999999999986542         467788889


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhhH
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSDV  211 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~Dv  211 (227)
                      ++.|++.||.|||   +.+++|+||||+|++++.++.+                   .|+..|+|||++.+..++.++|+
T Consensus       100 ~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  176 (279)
T cd06619         100 IAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDV  176 (279)
T ss_pred             HHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchH
Confidence            9999999999999   9999999999999999876543                   46788999999988889999999


Q ss_pred             HHHHHHHHHHHhCCCC
Q 040292          212 YSFGALLLELLTGKKG  227 (227)
Q Consensus       212 wS~G~il~el~tg~~p  227 (227)
                      ||||+++|+|++|+.|
T Consensus       177 wslG~~l~~l~~g~~p  192 (279)
T cd06619         177 WSLGISFMELALGRFP  192 (279)
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999999976

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.95  E-value=3.4e-27  Score=192.23  Aligned_cols=149  Identities=21%  Similarity=0.384  Sum_probs=123.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----------C
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----------S  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----------~  138 (227)
                      +|.++.....   +.+.  +|+.++.++ +||||+++++++...+..++||||+++|+|.+++.....           .
T Consensus        27 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~  104 (270)
T cd05047          27 IKRMKEYASKDDHRDFA--GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  104 (270)
T ss_pred             EEEccccCCHHHHHHHH--HHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccC
Confidence            5666543222   4566  899999999 899999999999999999999999999999999865321           0


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPE  198 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE  198 (227)
                      ....+++..+..++.|++.|++|||   +++++||||||+|+++++++.+                    ..+..|+|||
T Consensus       105 ~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE  181 (270)
T cd05047         105 TASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE  181 (270)
T ss_pred             CcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChH
Confidence            1124788999999999999999999   8999999999999999876543                    1234599999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++....++.++|+||||+++|||++ |..|
T Consensus       182 ~~~~~~~~~~~Di~slG~il~el~~~g~~p  211 (270)
T cd05047         182 SLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  211 (270)
T ss_pred             HHccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            9988889999999999999999997 7765

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.95  E-value=2.4e-27  Score=192.68  Aligned_cols=145  Identities=29%  Similarity=0.453  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCccc--CHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPF--LMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l--~~~~~~  149 (227)
                      +|.+......  +.+.  +|+.++++++|+||+++++++..++..++|+||+++++|.+++.....    ++  ++..+.
T Consensus        38 ~k~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~  111 (268)
T cd06624          38 IKEIPERDSRYVQPLH--EEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWG----PLKDNEQTII  111 (268)
T ss_pred             EEEecCCCHHHHHHHH--HHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcc----cCCCcHHHHH
Confidence            6666554333  4566  999999999999999999999999999999999999999999975421    34  677888


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-ce---------------------ecccCccccccccCCC--C
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-KL---------------------IGTFGFIAPECITTGN--C  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-~~---------------------~g~~~y~aPE~~~~~~--~  205 (227)
                      .++.|++.||.|||   +.+++||||+|+||+++.+. .+                     .+++.|+|||++....  +
T Consensus       112 ~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  188 (268)
T cd06624         112 FYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGY  188 (268)
T ss_pred             HHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccC
Confidence            89999999999999   99999999999999997522 11                     3567899999986543  7


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+||||+++|+|++|+.|
T Consensus       189 ~~~~Dv~slGvvl~~l~~g~~p  210 (268)
T cd06624         189 GAPADIWSLGCTIVEMATGKPP  210 (268)
T ss_pred             CchhhhHHHHHHHHHHHhCCCC
Confidence            8899999999999999999876

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.95  E-value=1.8e-27  Score=192.86  Aligned_cols=148  Identities=24%  Similarity=0.378  Sum_probs=125.7

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.++....     .+.+.  +|++++++++|+|++++++++...+..++||||+++++|.+++....... ..+++..+
T Consensus        32 ik~~~~~~~~~~~~~~~~~--~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~  108 (267)
T cd08224          32 LKKVQIFEMMDAKARQDCL--KEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQK-RLIPERTI  108 (267)
T ss_pred             EEEeecccccchhhHHHHH--HHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccC-CCcCHHHH
Confidence            776653221     13556  99999999999999999999999999999999999999999886432111 25788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.+++.||.|||   +.+++|+||+|+||+++.++.+                     .+++.|+|||.+.+..++.
T Consensus       109 ~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  185 (267)
T cd08224         109 WKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  185 (267)
T ss_pred             HHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCc
Confidence            999999999999999   9999999999999999876532                     3667799999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|++|+.|
T Consensus       186 ~~Di~slG~il~~l~~g~~p  205 (267)
T cd08224         186 KSDIWSLGCLLYEMAALQSP  205 (267)
T ss_pred             hhcHHHHHHHHHHHHHCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.95  E-value=3.2e-27  Score=193.09  Aligned_cols=143  Identities=25%  Similarity=0.384  Sum_probs=125.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++...      ++++.....
T Consensus        34 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~------~l~~~~~~~  105 (277)
T cd06640          34 IKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG------PFDEFQIAT  105 (277)
T ss_pred             EEEEeccccHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcC------CCCHHHHHH
Confidence            7777644332   3566  8999999999999999999999999999999999999999998642      578888899


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++.|++.||+|||   +.+++|+||+|+||++++++.+                     .++..|+|||.+.+...+.++
T Consensus       106 ~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~  182 (277)
T cd06640         106 MLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA  182 (277)
T ss_pred             HHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHH
Confidence            9999999999999   9999999999999999876532                     356679999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||||+++|||++|+.|
T Consensus       183 Dv~slG~il~el~tg~~p  200 (277)
T cd06640         183 DIWSLGITAIELAKGEPP  200 (277)
T ss_pred             HHHHHHHHHHHHHHCCCC
Confidence            999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.3e-27  Score=191.91  Aligned_cols=146  Identities=27%  Similarity=0.438  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +++.  +|+.++++++||||+++++++......++||||+++++|.+++.....   ..+++..+..++
T Consensus        35 vK~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~---~~~~~~~~~~~~  109 (261)
T cd05034          35 VKTLKPGTMSPEAFL--QEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEG---KKLRLPQLVDMA  109 (261)
T ss_pred             EEEecCCccCHHHHH--HHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhcccc---CCCCHHHHHHHH
Confidence            8877754433 5677  999999999999999999999988899999999999999999976431   257889999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee----------------------cccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI----------------------GTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~----------------------g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.|+.|||   +++++|+||+|+||++++++.+.                      ++..|+|||.+.+..++.++|
T Consensus       110 ~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  186 (261)
T cd05034         110 AQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSD  186 (261)
T ss_pred             HHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhH
Confidence            99999999999   99999999999999998876431                      224699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||+|++++++++ |+.|
T Consensus       187 i~slG~il~~l~t~g~~p  204 (261)
T cd05034         187 VWSFGILLTEIVTYGRVP  204 (261)
T ss_pred             HHHHHHHHHHHHhCCCCC
Confidence            9999999999998 7765

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=1.9e-27  Score=201.59  Aligned_cols=141  Identities=23%  Similarity=0.345  Sum_probs=119.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++....      ..|+||||+. ++|.+.+..       .+
T Consensus        51 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~~  120 (359)
T cd07876          51 VKKLSRPFQNQTHAKRAY--RELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIHM-------EL  120 (359)
T ss_pred             EEEecccccchhHHHHHH--HHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC-cCHHHHHhc-------cC
Confidence            8887644222    3455  9999999999999999999986543      4689999997 467666642       46


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~  203 (227)
                      ++..+..++.|++.||.|||   +++++||||||+||+++.++.+                    .||+.|+|||++.+.
T Consensus       121 ~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~  197 (359)
T cd07876         121 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGM  197 (359)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCC
Confidence            78888899999999999999   9999999999999999876543                    467889999999988


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++||||+||++|+|++|+.|
T Consensus       198 ~~~~~~DiwSlG~il~el~tg~~p  221 (359)
T cd07876         198 GYKENVDIWSVGCIMGELVKGSVI  221 (359)
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCC
Confidence            899999999999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.95  E-value=2.8e-27  Score=195.60  Aligned_cols=143  Identities=24%  Similarity=0.403  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.+++.++|||++++++++..++..++|+||+++++|.+++...      .+++.++..+
T Consensus        49 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~l~~~~~~~i  120 (296)
T cd06655          49 IKQINLQKQPKKELII--NEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET------CMDEAQIAAV  120 (296)
T ss_pred             EEEEecccCchHHHHH--HHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhc------CCCHHHHHHH
Confidence            7877654333  4555  9999999999999999999999999999999999999999988642      5788999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.|+.|||   +.+++|+||+|+||+++.++.+                     .+++.|+|||.+.+..++.++|
T Consensus       121 ~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  197 (296)
T cd06655         121 CRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD  197 (296)
T ss_pred             HHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhh
Confidence            999999999999   9999999999999999876533                     3566899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +|||||++|++++|+.|
T Consensus       198 v~slGvil~~lltg~~p  214 (296)
T cd06655         198 IWSLGIMAIEMVEGEPP  214 (296)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=3.4e-27  Score=195.59  Aligned_cols=146  Identities=21%  Similarity=0.387  Sum_probs=124.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....   +.+.  +|+.+++++ +||||+++++++...+..++||||+++|+|.+++.....   ..+++..+.
T Consensus        70 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~---~~l~~~~~~  144 (302)
T cd05055          70 VKMLKPTAHSSEREALM--SELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRE---SFLTLEDLL  144 (302)
T ss_pred             EEecCccCChHHHHHHH--HHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCC---CCCCHHHHH
Confidence            6766654332   3566  999999999 899999999999999999999999999999999975332   137899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      .++.|++.||.|||   +++++|+||||+||+++.++.+                       .++..|+|||.+....++
T Consensus       145 ~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  221 (302)
T cd05055         145 SFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYT  221 (302)
T ss_pred             HHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCC
Confidence            99999999999999   9999999999999999875532                       124569999999888899


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++||||+|+++|||++ |..|
T Consensus       222 ~~~DiwslGvil~el~t~g~~p  243 (302)
T cd05055         222 FESDVWSYGILLWEIFSLGSNP  243 (302)
T ss_pred             cHhHHHHHHHHHHHHHhCCCCC
Confidence            99999999999999998 8765

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=2.5e-27  Score=194.16  Aligned_cols=143  Identities=27%  Similarity=0.463  Sum_probs=122.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......   ..+.  +|+.++++++||||+++++++...  ...++||||+++++|.+++...      .+++.++
T Consensus        38 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------~l~~~~~  109 (283)
T cd05080          38 VKTLKRECGQQNTSGWK--KEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKH------KLNLAQL  109 (283)
T ss_pred             EEEeccccChHHHHHHH--HHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHc------CCCHHHH
Confidence            7877654332   4566  999999999999999999988754  3578999999999999998653      5889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..++.|++.||.|||   +++++||||||+||++++++.+                        .++..|+|||......
T Consensus       110 ~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  186 (283)
T cd05080         110 LLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENK  186 (283)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccC
Confidence            999999999999999   9999999999999999876533                        1234589999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||||+++|||+||..|
T Consensus       187 ~~~~~Di~slG~~l~el~tg~~p  209 (283)
T cd05080         187 FSYASDVWSFGVTLYELLTHCDS  209 (283)
T ss_pred             CCcccccHHHHHHHHHHHhCCCC
Confidence            89999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.95  E-value=3.6e-27  Score=191.48  Aligned_cols=145  Identities=23%  Similarity=0.399  Sum_probs=125.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   .+|.  +|+.++++++||||+++++++...+..++||||+++++|.+++....+    .+++..+..
T Consensus        37 ik~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~  110 (266)
T cd05033          37 IKTLKAGSSDKQRLDFL--TEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDG----KFTVGQLVG  110 (266)
T ss_pred             EEEcCCCCChHHHHHHH--HHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccC----CCCHHHHHH
Confidence            7776644332   3566  899999999999999999999999999999999999999999976432    678999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.|+.|||   +++++|+||+|+||++++++.+                       .+++.|+|||.+.+..++.
T Consensus       111 ~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~  187 (266)
T cd05033         111 MLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTS  187 (266)
T ss_pred             HHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCcc
Confidence            9999999999999   9999999999999999876532                       1235699999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|+||||+++|++++ |..|
T Consensus       188 ~~Dv~slG~~l~~l~~~g~~p  208 (266)
T cd05033         188 ASDVWSFGIVMWEVMSYGERP  208 (266)
T ss_pred             ccchHHHHHHHHHHHccCCCC
Confidence            9999999999999998 8765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.95  E-value=3.5e-27  Score=191.75  Aligned_cols=145  Identities=23%  Similarity=0.395  Sum_probs=123.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.++.....   +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++.....    .+++..+..
T Consensus        37 ik~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~  110 (267)
T cd05066          37 IKTLKAGYTEKQRRDFL--SEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDG----QFTVIQLVG  110 (267)
T ss_pred             EEECCCCCCHHHHHHHH--HHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCC----CCCHHHHHH
Confidence            6666543322   3566  999999999999999999999999999999999999999999976432    578889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee------------------------cccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI------------------------GTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~------------------------g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.|+.|||   +.+++||||||+|++++.++.+.                        ++..|+|||++.+..++
T Consensus       111 i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  187 (267)
T cd05066         111 MLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT  187 (267)
T ss_pred             HHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccC
Confidence            9999999999999   99999999999999998765430                        12459999999888899


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++|+||||+++||+++ |..|
T Consensus       188 ~~~Dv~slG~~l~ell~~g~~p  209 (267)
T cd05066         188 SASDVWSYGIVMWEVMSYGERP  209 (267)
T ss_pred             chhhhHHHHHHHHHHhcCCCCC
Confidence            99999999999999886 8865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.2e-27  Score=191.64  Aligned_cols=153  Identities=22%  Similarity=0.417  Sum_probs=130.1

Q ss_pred             eeecCCC--eEEEcCCCC-cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           67 GFLQDHP--ISEFGDNLN-TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      +...+..  ||.+..... .+++.  +|+.++++++|+||+++++++...+..++||||+++++|.+++.....   ..+
T Consensus        25 ~~~~~~~v~iK~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---~~~   99 (256)
T cd05039          25 GDYRGQKVAVKCLKDDSTAAQAFL--AEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGR---AVI   99 (256)
T ss_pred             EEecCcEEEEEEeccchhHHHHHH--HHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCC---CCC
Confidence            3444444  888876655 35666  999999999999999999999988999999999999999999975432   257


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ++..+..++.|++.||.|||   +++++|+||+|+||+++.++.+                  ..+..|+|||.+....+
T Consensus       100 ~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~  176 (256)
T cd05039         100 TLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKF  176 (256)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccccCchhhcCCcC
Confidence            89999999999999999999   9999999999999999877643                  12346999999988888


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++|+||||+++|++++ |..|
T Consensus       177 ~~~~Di~slG~il~~l~~~g~~p  199 (256)
T cd05039         177 STKSDVWSFGILLWEIYSFGRVP  199 (256)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCCC
Confidence            999999999999999997 7765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=2.2e-27  Score=217.37  Aligned_cols=149  Identities=19%  Similarity=0.350  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC------CCCcc
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG------SQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~------~~~~~  142 (227)
                      ||++......     ++|.  +|+.++++++||||+++++++.+++..++||||++||+|.+++.....      .....
T Consensus        32 IK~I~~~l~~~e~~~~rfl--rEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~  109 (932)
T PRK13184         32 LKKIREDLSENPLLKKRFL--REAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEK  109 (932)
T ss_pred             EEEECcccccCHHHHHHHH--HHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcc
Confidence            8888654322     3566  999999999999999999999999999999999999999998864211      00124


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------------------
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------------------  187 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------------------  187 (227)
                      .++..+..++.|++.||+|||   +++++||||||+||+++.++.                                   
T Consensus       110 lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t  186 (932)
T PRK13184        110 TSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMT  186 (932)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccc
Confidence            566778899999999999999   899999999999999976431                                   


Q ss_pred             ----eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 ----LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 ----~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                          .+||+.|+|||.+.+..++.++|||||||++|||+||+.|
T Consensus       187 ~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        187 IPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             cCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence                2478999999999988899999999999999999999987

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=2e-27  Score=194.96  Aligned_cols=144  Identities=28%  Similarity=0.457  Sum_probs=122.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.++.....   +.+.  +|+.++++++|||++++.+++...  ...++||||+++++|.+++.....    .+++..+
T Consensus        38 ~K~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~----~~~~~~~  111 (284)
T cd05079          38 VKSLKPESGGNHIADLK--KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKN----KINLKQQ  111 (284)
T ss_pred             EEEcCccccHHHHHHHH--HHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccC----CCCHHHH
Confidence            7887654333   4566  999999999999999999998775  567899999999999999865432    5789999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..++.|++.||+|||   +++++||||||+||+++.++.+                        .++..|+|||++.+..
T Consensus       112 ~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~  188 (284)
T cd05079         112 LKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSK  188 (284)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCC
Confidence            999999999999999   9999999999999999876532                        2344699999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~  226 (227)
                      ++.++|+||||+++|||+|++.
T Consensus       189 ~~~~~Di~slG~il~ellt~~~  210 (284)
T cd05079         189 FYIASDVWSFGVTLYELLTYCD  210 (284)
T ss_pred             CCccccchhhhhhhhhhhcCCC
Confidence            8999999999999999999754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.95  E-value=3.9e-27  Score=191.41  Aligned_cols=145  Identities=24%  Similarity=0.417  Sum_probs=124.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +++.  +|+.++++++|||++++.+++...+..++||||+++++|.+++.....    .+++..+..
T Consensus        38 ik~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~  111 (268)
T cd05063          38 IKTLKPGYTEKQRQDFL--SEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDG----EFSSYQLVG  111 (268)
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCC----CCCHHHHHH
Confidence            6666544322   4566  999999999999999999999999999999999999999999975432    678899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee------------------------cccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI------------------------GTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~------------------------g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.|++|||   +.+++|+||||+||++++++.+.                        .++.|+|||++....++
T Consensus       112 ~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  188 (268)
T cd05063         112 MLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFT  188 (268)
T ss_pred             HHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcC
Confidence            9999999999999   89999999999999998765430                        12359999999888889


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++|+||||+++||+++ |+.|
T Consensus       189 ~~~Dv~slG~il~ell~~g~~p  210 (268)
T cd05063         189 SASDVWSFGIVMWEVMSFGERP  210 (268)
T ss_pred             hHhHHHHHHHHHHHHHhCCCCC
Confidence            99999999999999997 8876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.95  E-value=2e-27  Score=192.80  Aligned_cols=144  Identities=28%  Similarity=0.463  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......        ..+.  +|+.++++++|+||+++.+++...+..++|+||+++++|.+++....     ++++
T Consensus        29 vk~~~~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~  101 (265)
T cd06631          29 VKQVELDTSNVLAAEKEYEKLQ--EEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG-----PLPE  101 (265)
T ss_pred             EEEeecCccchhhHHHHHHHHH--HHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcC-----CCCH
Confidence            7777644321        2355  89999999999999999999999999999999999999999997543     5788


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------------ecccCccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------------IGTFGFIAPE  198 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------------~g~~~y~aPE  198 (227)
                      ..+..++.|++.||+|||   +.+++|+||+|+|+++++++.+                           .++..|+|||
T Consensus       102 ~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  178 (265)
T cd06631         102 PVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE  178 (265)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChh
Confidence            889999999999999999   8999999999999999865432                           2566799999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.+..++.++|+||||+++|+|++|+.|
T Consensus       179 ~~~~~~~~~~~Dv~slG~~~~~l~~g~~p  207 (265)
T cd06631         179 VINESGYGRKSDIWSIGCTVFEMATGKPP  207 (265)
T ss_pred             hhcCCCCcchhhHHHHHHHHHHHHhCCCc
Confidence            99888889999999999999999999987

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=2.1e-27  Score=192.79  Aligned_cols=133  Identities=28%  Similarity=0.514  Sum_probs=119.9

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.++++++||||+++++++...+..++|+||+++++|.+++....     ++++..+..++.|++.||+||| 
T Consensus        52 ~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~~l~~~l~~lH-  123 (267)
T cd06628          52 ALA--REIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYG-----AFEETLVRNFVRQILKGLNYLH-  123 (267)
T ss_pred             HHH--HHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHH-
Confidence            355  89999999999999999999999999999999999999999997643     6788889999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce---------------------------ecccCccccccccCCCCCchhhHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL---------------------------IGTFGFIAPECITTGNCNEKSDVYSFGAL  217 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~---------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~i  217 (227)
                        +.+++||||+|+||++++++.+                           .|+..|+|||.+....++.++|+||+|++
T Consensus       124 --~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i  201 (267)
T cd06628         124 --NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCL  201 (267)
T ss_pred             --hcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHH
Confidence              8999999999999999876532                           25667999999988888999999999999


Q ss_pred             HHHHHhCCCC
Q 040292          218 LLELLTGKKG  227 (227)
Q Consensus       218 l~el~tg~~p  227 (227)
                      +|+|++|+.|
T Consensus       202 l~~l~~g~~p  211 (267)
T cd06628         202 VVEMLTGKHP  211 (267)
T ss_pred             HHHHhhCCCC
Confidence            9999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=2.7e-27  Score=194.52  Aligned_cols=146  Identities=21%  Similarity=0.332  Sum_probs=126.0

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     ..+.  +|+.++++++|+||+.+.+++..++..++||||+++++|.+++.....   ..+++..+
T Consensus        30 iK~~~~~~~~~~~~~~~~~--~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~  104 (285)
T cd05632          30 CKRLEKKRIKKRKGESMAL--NEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGN---PGFEEERA  104 (285)
T ss_pred             EEEeehhhhhhhhHHHHHH--HHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcC---CCCCHHHH
Confidence            7777543221     2345  899999999999999999999999999999999999999988864321   25889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||.|||   +++++||||||+|+++++++.+                    .|+..|+|||++.+..++.+
T Consensus       105 ~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~  181 (285)
T cd05632         105 LFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLS  181 (285)
T ss_pred             HHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcc
Confidence            999999999999999   9999999999999999865432                    46788999999988889999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|+|++|..|
T Consensus       182 ~Di~slG~~l~~l~~g~~P  200 (285)
T cd05632         182 PDYWGLGCLIYEMIEGQSP  200 (285)
T ss_pred             cchHHHHHHHHHHHhCCCC
Confidence            9999999999999999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.95  E-value=2.1e-27  Score=196.80  Aligned_cols=149  Identities=21%  Similarity=0.375  Sum_probs=123.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      +|.++.....   ..+.  +|+.++.++ +||||+++++++..++..++|+||+++++|.+++......           
T Consensus        39 ik~~~~~~~~~~~~~~~--~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  116 (303)
T cd05088          39 IKRMKEYASKDDHRDFA--GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  116 (303)
T ss_pred             EEEecccCCHHHHHHHH--HHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhccccccccccccccc
Confidence            5555533222   3566  899999999 8999999999999999999999999999999998653210           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPE  198 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE  198 (227)
                      ....+++..+..++.|++.|++|||   +++++||||||+|+++++++.+                    .++..|+|||
T Consensus       117 ~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  193 (303)
T cd05088         117 TASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE  193 (303)
T ss_pred             ccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHH
Confidence            1125788899999999999999999   9999999999999999876543                    1234699999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+.+..++.++|||||||++|||+| |..|
T Consensus       194 ~~~~~~~~~~~Di~slG~il~ellt~g~~p  223 (303)
T cd05088         194 SLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  223 (303)
T ss_pred             HHhccCCcccccchhhhhHHHHHHhcCCCC
Confidence            9988888999999999999999998 7765

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.95  E-value=6.6e-27  Score=189.81  Aligned_cols=145  Identities=26%  Similarity=0.373  Sum_probs=122.2

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +++.  +|+.++++++||||+++++.+. ....++||||+++|+|.+++.....   ..+++..+..++
T Consensus        35 lK~~~~~~~~~~~~~--~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~  108 (262)
T cd05071          35 IKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMG---KYLRLPQLVDMA  108 (262)
T ss_pred             EEecccCccCHHHHH--HHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccc---cCCCHHHHHHHH
Confidence            7877754332 5677  9999999999999999999874 4567999999999999999975321   157888999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +++++|+||+|+||++++++.+                      .++..|+|||+.....++.++|
T Consensus       109 ~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  185 (262)
T cd05071         109 AQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD  185 (262)
T ss_pred             HHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhh
Confidence            99999999999   9999999999999999876543                      1334699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|+|+| |..|
T Consensus       186 vwslG~~l~ellt~g~~p  203 (262)
T cd05071         186 VWSFGILLTELTTKGRVP  203 (262)
T ss_pred             HHHHHHHHHHHHcCCCCC
Confidence            9999999999999 6654

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.95  E-value=2.5e-27  Score=195.87  Aligned_cols=143  Identities=24%  Similarity=0.382  Sum_probs=125.8

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.+++.++||||+++++++..++..++||||+++++|.+++...      .+++.++..+
T Consensus        49 iK~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~  120 (297)
T cd06656          49 IKQMNLQQQPKKELII--NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAV  120 (297)
T ss_pred             EEEEecCccchHHHHH--HHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhC------CCCHHHHHHH
Confidence            8877654333  4455  8999999999999999999999999999999999999999998642      5788899999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||.|||   +.+++||||+|+||+++.++.+                     .+++.|+|||.+.+..++.++|
T Consensus       121 ~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  197 (297)
T cd06656         121 CRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD  197 (297)
T ss_pred             HHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHH
Confidence            999999999999   8999999999999999876532                     3567899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|++++|+.|
T Consensus       198 i~slGvil~~l~tg~~p  214 (297)
T cd06656         198 IWSLGIMAIEMVEGEPP  214 (297)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.95  E-value=7.4e-28  Score=208.08  Aligned_cols=144  Identities=23%  Similarity=0.303  Sum_probs=124.2

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-C-----cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-H-----KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-H-----~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++....- .+-.  .|+.+|..|+ |     -|+|+++++|...++.|||+|.+. -+|+++++....   ..++..
T Consensus       216 IKIiKN~k~f~~Q~~--~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f---~Glsl~  289 (586)
T KOG0667|consen  216 IKIIKNKKRFLRQAQ--IEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKF---RGLSLP  289 (586)
T ss_pred             EEeeccChHHHHHHH--HHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCC---CCCCHH
Confidence            7777765443 3334  7999999996 4     389999999999999999999995 799999987654   357889


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      .++.++.||+.||.+||   ..+|+|+||||+|||+.+.+..                    +-+..|.|||++.+.+|+
T Consensus       290 ~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~  366 (586)
T KOG0667|consen  290 LVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYD  366 (586)
T ss_pred             HHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCC
Confidence            99999999999999999   9999999999999999875432                    345679999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCC
Q 040292          207 EKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~  226 (227)
                      .+.|+||||||++||++|.+
T Consensus       367 ~~IDmWSLGCIlAEL~tG~P  386 (586)
T KOG0667|consen  367 TAIDMWSLGCILAELFTGEP  386 (586)
T ss_pred             CccceeehhhhHHhHhcCcc
Confidence            99999999999999999964

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=2.3e-27  Score=195.29  Aligned_cols=144  Identities=24%  Similarity=0.374  Sum_probs=126.7

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+.....     .+.+.  +|++++++++||||+++++++..++..++||||+++++|.+++....     .+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-----~l~~~~~  103 (290)
T cd05580          31 LKILSKAKIVKLKQVEHVL--NEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSG-----RFPEPVA  103 (290)
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcC-----CCCHHHH
Confidence            777754321     13455  89999999999999999999999999999999999999999987653     6888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||.|||   +.+++|+||+|+||+++.++.+                  .+++.|+|||.+.+...+.++|
T Consensus       104 ~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  180 (290)
T cd05580         104 RFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVD  180 (290)
T ss_pred             HHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCcccc
Confidence            999999999999999   8999999999999999877543                  4677899999998888889999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|+|++|+.|
T Consensus       181 i~slG~il~~l~~g~~p  197 (290)
T cd05580         181 WWALGILIYEMLAGYPP  197 (290)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999976

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-28  Score=196.20  Aligned_cols=145  Identities=23%  Similarity=0.386  Sum_probs=133.1

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      ||++.-...-++..  +||.+++++..|++|++||.+.....+|+|||||--|+..+.++.++.    ++.++++..++.
T Consensus        63 IK~VPV~sDLQEII--KEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K----~L~E~EIs~iL~  136 (502)
T KOG0574|consen   63 IKKVPVDTDLQEII--KEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRK----PLSEQEISAVLR  136 (502)
T ss_pred             EEecCccchHHHHH--HHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcC----CccHHHHHHHHH
Confidence            77776665567777  999999999999999999999999999999999999999999987663    899999999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCC---------------------ceecccCccccccccCCCCCchhhHH
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND---------------------KLIGTFGFIAPECITTGNCNEKSDVY  212 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~---------------------~~~g~~~y~aPE~~~~~~~~~~~Dvw  212 (227)
                      .-+.||+|||   ...-+|||||..|||++.+|                     +++|||.|||||++..-.|+.++|||
T Consensus       137 ~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIW  213 (502)
T KOG0574|consen  137 DTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIW  213 (502)
T ss_pred             HHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHh
Confidence            9999999999   88899999999999998765                     24799999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCC
Q 040292          213 SFGALLLELLTGKKG  227 (227)
Q Consensus       213 S~G~il~el~tg~~p  227 (227)
                      |+|++..||..|++|
T Consensus       214 SLGITaIEMAEG~PP  228 (502)
T KOG0574|consen  214 SLGITAIEMAEGRPP  228 (502)
T ss_pred             hhcchhhhhhcCCCC
Confidence            999999999999998

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=4e-27  Score=195.71  Aligned_cols=146  Identities=23%  Similarity=0.339  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    +.+.  +|+.++++++||||+++++++...+..+++|||+++|+|.+++.....   ..+++....
T Consensus        30 vK~~~~~~~~~~~~~~~~--~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~---~~~~~~~~~  104 (314)
T cd08216          30 VKKINLDSCSKEDLKLLQ--QEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFP---EGLPELAIA  104 (314)
T ss_pred             EEEEeccccchhHHHHHH--HHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcc---cCCCHHHHH
Confidence            8887654221    4566  999999999999999999999999999999999999999999875421   157788889


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------ecccCcccccccc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------~g~~~y~aPE~~~  201 (227)
                      .++.|++.||+|||   +.+++||||||+||+++.++.+                            .++..|+|||.+.
T Consensus       105 ~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (314)
T cd08216         105 FILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQ  181 (314)
T ss_pred             HHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhc
Confidence            99999999999999   9999999999999999875432                            2445799999986


Q ss_pred             CC--CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TG--NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~--~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..  .++.++|+|||||++|||++|+.|
T Consensus       182 ~~~~~~~~~~Diws~G~il~el~~g~~p  209 (314)
T cd08216         182 QNLQGYNEKSDIYSVGITACELANGHVP  209 (314)
T ss_pred             CCCCCCCcchhHHHHHHHHHHHHhCCCC
Confidence            53  478899999999999999999877

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=7.8e-29  Score=226.63  Aligned_cols=144  Identities=25%  Similarity=0.381  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|-++.....    ....  +|+.+|..++|||+|++||+-.+.+..++.||||++|+|.+.+...+     -.++....
T Consensus      1265 vKEI~iq~~~~k~~~~i~--eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gr-----i~dE~vt~ 1337 (1509)
T KOG4645|consen 1265 VKEIKIQDSDHKTFKLIA--EEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGR-----IEDEMVTR 1337 (1509)
T ss_pred             hhhhhcCccccccCcchH--HHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcc-----hhhhhHHH
Confidence            5555443332    3344  89999999999999999999999999999999999999999987543     45667777


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~  204 (227)
                      .+..|++.|+.|||   ..+|||||+||.||+++.+|.+                         .||+.|||||++.+.+
T Consensus      1338 vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~ 1414 (1509)
T KOG4645|consen 1338 VYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTK 1414 (1509)
T ss_pred             HHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccc
Confidence            88999999999999   9999999999999999987743                         6999999999997654


Q ss_pred             ---CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 ---CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ---~~~~~DvwS~G~il~el~tg~~p  227 (227)
                         ...++||||+||++.||+||++|
T Consensus      1415 ~kG~~~A~DiWslGCVVlEM~tGkrP 1440 (1509)
T KOG4645|consen 1415 GKGHGGAADIWSLGCVVLEMATGKRP 1440 (1509)
T ss_pred             cCCCCcchhhhcccceEEEeecCCCc
Confidence               56789999999999999999998

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=4.8e-27  Score=193.26  Aligned_cols=149  Identities=22%  Similarity=0.407  Sum_probs=124.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-------------  137 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-------------  137 (227)
                      +|.+......   +++.  +|+.++++++||||+++++.|..++..++++||+++++|.+++.....             
T Consensus        35 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  112 (290)
T cd05045          35 VKMLKENASSSELRDLL--SEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRN  112 (290)
T ss_pred             EEecCCCCCHHHHHHHH--HHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccc
Confidence            6666544332   3456  999999999999999999999999999999999999999998864211             


Q ss_pred             ------CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------
Q 040292          138 ------SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------  188 (227)
Q Consensus       138 ------~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------  188 (227)
                            ....++++..+..++.|++.||.|||   +.+++||||||+||++++++.+                       
T Consensus       113 ~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  189 (290)
T cd05045         113 SSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKG  189 (290)
T ss_pred             cccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCC
Confidence                  11125788899999999999999999   9999999999999999876533                       


Q ss_pred             ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++..|+|||.+.+..++.++||||||+++|||++ |..|
T Consensus       190 ~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p  229 (290)
T cd05045         190 RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP  229 (290)
T ss_pred             CCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCC
Confidence            13457999999988889999999999999999998 7765

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.95  E-value=2.9e-27  Score=205.69  Aligned_cols=145  Identities=21%  Similarity=0.298  Sum_probs=115.5

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeC--------CcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLET--------EVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||++....  ....  +|+.+|++++||||+++++++...        ...++||||++ ++|.+++....... ..+++
T Consensus        96 iK~i~~~~--~~~~--~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~-~~l~~  169 (440)
T PTZ00036         96 IKKVLQDP--QYKN--RELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNN-HALPL  169 (440)
T ss_pred             EEEEecCc--chHH--HHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcC-CCCCH
Confidence            77764332  2234  899999999999999999887532        13568999998 57777664321111 26888


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-e--------------------ecccCccccccccCC-
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-L--------------------IGTFGFIAPECITTG-  203 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-~--------------------~g~~~y~aPE~~~~~-  203 (227)
                      ..+..++.|++.||.|||   +.+|+||||||+||+++.++. +                    .||+.|+|||++.+. 
T Consensus       170 ~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~  246 (440)
T PTZ00036        170 FLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGAT  246 (440)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCC
Confidence            999999999999999999   999999999999999986532 1                    467889999998654 


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++|||||||++|||++|.+|
T Consensus       247 ~~~~~~DiwSlGvil~elltG~~p  270 (440)
T PTZ00036        247 NYTTHIDLWSLGCIIAEMILGYPI  270 (440)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999876

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.95  E-value=4.7e-28  Score=187.95  Aligned_cols=152  Identities=21%  Similarity=0.287  Sum_probs=124.8

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|++......+.-.+.+|++..++++||||+++++++..+.     ..|++++|...|||.+.+......+ ..+++.+.
T Consensus        51 lKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg-~~~sE~~i  129 (302)
T KOG2345|consen   51 LKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKG-NFVSEAQI  129 (302)
T ss_pred             hheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcC-CccCHHHH
Confidence            88887776553333449999999999999999998876543     4899999999999999987544322 26899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------ecccCccccc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------IGTFGFIAPE  198 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------~g~~~y~aPE  198 (227)
                      +.++.++.+||++||.. ..+..||||||.||++++++..                              ..|..|.|||
T Consensus       130 L~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPE  208 (302)
T KOG2345|consen  130 LWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPE  208 (302)
T ss_pred             HHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCch
Confidence            99999999999999932 2349999999999999886543                              3677899999


Q ss_pred             cccCC---CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          199 CITTG---NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       199 ~~~~~---~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.-.   ..+.++|||||||++|+|+.|..|
T Consensus       209 Lf~vk~~~ti~ertDIWSLGCtLYa~mf~~sP  240 (302)
T KOG2345|consen  209 LFNVKSHCTITERTDIWSLGCTLYAMMFGESP  240 (302)
T ss_pred             heecccCcccccccchhhhhHHHHHHHHcCCc
Confidence            99644   467899999999999999999877

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.95  E-value=4.2e-27  Score=191.46  Aligned_cols=146  Identities=27%  Similarity=0.429  Sum_probs=121.7

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      +|.+...... .++.  +|+.++.++ +||||+++++++...      ...++||||+++++|.+++.....   ..+++
T Consensus        36 ik~~~~~~~~~~~~~--~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~---~~l~~  110 (272)
T cd06637          36 IKVMDVTGDEEEEIK--QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKE  110 (272)
T ss_pred             EEEEEcCCccHHHHH--HHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccC---CCCCH
Confidence            7777654333 4566  999999999 799999999998753      347899999999999999875321   25788


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc---
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT---  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~---  201 (227)
                      ..+..++.|++.|++|||   +++++|+||+|+||++++++.+                     .|++.|+|||++.   
T Consensus       111 ~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~  187 (272)
T cd06637         111 EWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  187 (272)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccccccCHhHhcccc
Confidence            999999999999999999   8999999999999999876532                     4677899999985   


Q ss_pred             --CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 --TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 --~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        ...++.++|+||+||++|||++|+.|
T Consensus       188 ~~~~~~~~~~Dv~slGv~l~el~~g~~p  215 (272)
T cd06637         188 NPDATYDFKSDLWSLGITAIEMAEGAPP  215 (272)
T ss_pred             CcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence              23578899999999999999999976

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1e-27  Score=199.54  Aligned_cols=137  Identities=26%  Similarity=0.395  Sum_probs=126.8

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      +-.+++|-.+|.+++.|.||.+--+|...+.+|||+..|.||+|.-+|...++   .-++++.++.++.+|+.||++|| 
T Consensus       229 e~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~---~gF~e~ra~FYAAEi~cGLehlH-  304 (591)
T KOG0986|consen  229 ETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGN---PGFDEQRARFYAAEIICGLEHLH-  304 (591)
T ss_pred             hHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCC---CCCchHHHHHHHHHHHhhHHHHH-
Confidence            33456999999999999999999999999999999999999999999987664   25899999999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                        ..+|+.|||||+|||+|+.|.+                    +||.+|||||++.+..|+...|.||+||++|||+.|
T Consensus       305 --~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G  382 (591)
T KOG0986|consen  305 --RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAG  382 (591)
T ss_pred             --hcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcc
Confidence              9999999999999999998764                    799999999999999999999999999999999999


Q ss_pred             CCC
Q 040292          225 KKG  227 (227)
Q Consensus       225 ~~p  227 (227)
                      +.|
T Consensus       383 ~sP  385 (591)
T KOG0986|consen  383 HSP  385 (591)
T ss_pred             cCc
Confidence            987

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.95  E-value=2.5e-27  Score=200.51  Aligned_cols=141  Identities=23%  Similarity=0.321  Sum_probs=119.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    ..+.  +|+.+++.++||||+++++++....      ..++||||++ +++.+.+..       .+
T Consensus        47 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~l  116 (355)
T cd07874          47 IKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM-------EL  116 (355)
T ss_pred             EEEeCCcccChHHHHHHH--HHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc-ccHHHHHhh-------cC
Confidence            8887654322    3444  8999999999999999999886543      4689999997 467776643       57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~  203 (227)
                      ++..+..++.|++.||.|||   +++++||||||+||+++.++.+                    .||+.|+|||++.+.
T Consensus       117 ~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  193 (355)
T cd07874         117 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCC
Confidence            78888999999999999999   9999999999999999876533                    477889999999888


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++|+|||||++|+|++|+.|
T Consensus       194 ~~~~~~DiwslG~il~el~~g~~p  217 (355)
T cd07874         194 GYKENVDIWSVGCIMGEMVRHKIL  217 (355)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.95  E-value=3e-27  Score=200.69  Aligned_cols=141  Identities=22%  Similarity=0.330  Sum_probs=119.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.+++.++||||+++++++...      ...|+||||++ ++|.+.+..       .+
T Consensus        54 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~~  123 (364)
T cd07875          54 IKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-------EL  123 (364)
T ss_pred             EEEeCccccCchhHHHHH--HHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC-CCHHHHHHh-------cC
Confidence            8887654322    3445  899999999999999999987643      24689999997 577777643       46


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~  203 (227)
                      ++..+..++.|++.||+|||   +++++||||||+||+++.++.+                    .+|+.|+|||++.+.
T Consensus       124 ~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~  200 (364)
T cd07875         124 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM  200 (364)
T ss_pred             CHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCC
Confidence            78888999999999999999   9999999999999999876533                    477889999999988


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++|||||||++|+|++|+.|
T Consensus       201 ~~~~~~DiwSlG~il~ell~g~~p  224 (364)
T cd07875         201 GYKENVDIWSVGCIMGEMIKGGVL  224 (364)
T ss_pred             CCCchhhHHhHHHHHHHHHhCCCC
Confidence            899999999999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.95  E-value=4e-27  Score=190.05  Aligned_cols=145  Identities=26%  Similarity=0.471  Sum_probs=126.1

Q ss_pred             eEEEcCCCC-c--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLN-T--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~-~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+..... .  +++.  +|+.++++++||||+++++.+.. ...++|+||+++++|.+++.....   ..+++.....
T Consensus        28 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~  101 (257)
T cd05040          28 VKCLKSDKLSDIMDDFL--KEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDAL---GHFLISTLCD  101 (257)
T ss_pred             EeecCCcccHHHHHHHH--HHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhccc---ccCcHHHHHH
Confidence            777766554 2  4666  99999999999999999999988 888999999999999999976432   2678999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||.|||   +++++|+||+|+|++++.++.+                        .++..|+|||.+....++
T Consensus       102 ~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~  178 (257)
T cd05040         102 YAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFS  178 (257)
T ss_pred             HHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcC
Confidence            9999999999999   9999999999999999876532                        244579999999888899


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++|+||||+++|+|++ |+.|
T Consensus       179 ~~~Di~slG~~l~el~t~g~~p  200 (257)
T cd05040         179 HASDVWMFGVTLWEMFTYGEEP  200 (257)
T ss_pred             chhhhHHHHHHHHHHHhCCCCC
Confidence            99999999999999998 8876

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.94  E-value=5.7e-27  Score=191.59  Aligned_cols=149  Identities=22%  Similarity=0.408  Sum_probs=123.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC--CCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG--SQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~--~~~~~l~~~~~  148 (227)
                      +|.+......   .+|.  +|+.++++++|+||+++++++.+.+..++||||+++++|.+++.....  .....+++..+
T Consensus        41 ik~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~  118 (277)
T cd05036          41 VKTLPESCSEQDESDFL--MEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDL  118 (277)
T ss_pred             EEEcCCCCCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHH
Confidence            6655543322   3466  999999999999999999999999999999999999999999865431  11125889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---e-----------------------ecccCccccccccC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---L-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..++.|++.||+|||   +++++|+||||+||+++.++.   +                       ..+..|+|||++.+
T Consensus       119 ~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05036         119 LFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD  195 (277)
T ss_pred             HHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhc
Confidence            999999999999999   899999999999999976431   1                       01245999999988


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..++.++|||||||++|||++ |..|
T Consensus       196 ~~~~~~~DiwslG~il~el~~~g~~p  221 (277)
T cd05036         196 GIFTSKTDVWSFGVLLWEIFSLGYMP  221 (277)
T ss_pred             CCcCchhHHHHHHHHHHHHHcCCCCC
Confidence            889999999999999999997 7665

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.94  E-value=8.3e-27  Score=188.75  Aligned_cols=145  Identities=24%  Similarity=0.426  Sum_probs=123.8

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +++.  +|+.++++++||||+++++++. .+..+++|||+++++|.+++....+   ..+++..+..++
T Consensus        35 ~K~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~  108 (260)
T cd05067          35 IKSLKQGSMSPEAFL--AEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEG---IKLTINKLIDMA  108 (260)
T ss_pred             EEEecCCCCcHHHHH--HHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCC---CCCCHHHHHHHH
Confidence            8888755443 5677  9999999999999999999864 5678999999999999999865432   257888999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||+|||   +.+++|+||+|+|+++++++.+                      .++..|+|||++....++.++|
T Consensus       109 ~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~D  185 (260)
T cd05067         109 AQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD  185 (260)
T ss_pred             HHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccc
Confidence            99999999999   9999999999999999876533                      1335699999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++||+++ |+.|
T Consensus       186 i~slG~~l~el~~~g~~p  203 (260)
T cd05067         186 VWSFGILLTEIVTYGRIP  203 (260)
T ss_pred             hHHHHHHHHHHHhCCCCC
Confidence            9999999999998 8776

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=1.9e-27  Score=196.16  Aligned_cols=143  Identities=22%  Similarity=0.432  Sum_probs=125.1

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+..+++++||||+++++.+..++..++||||+++++|.+++...      .+++..+..+
T Consensus        52 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~l~~~~~~~~  123 (292)
T cd06658          52 VKKMDLRKQQRRELLF--NEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIATV  123 (292)
T ss_pred             EEEEecchHHHHHHHH--HHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcC------CCCHHHHHHH
Confidence            7776543322  3455  9999999999999999999999999999999999999999988532      5788899999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||.|||   +.+++||||+|+|+++++++.+                     .|+..|+|||.+....++.++|
T Consensus       124 ~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  200 (292)
T cd06658         124 CLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVD  200 (292)
T ss_pred             HHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhh
Confidence            999999999999   8999999999999999876432                     4677899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|||++|+.|
T Consensus       201 v~slGvil~el~~g~~p  217 (292)
T cd06658         201 IWSLGIMVIEMIDGEPP  217 (292)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.94  E-value=3.8e-27  Score=190.14  Aligned_cols=146  Identities=26%  Similarity=0.374  Sum_probs=125.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.++.....   +.+.  +|+.++++++||||+++++.+..++..++|+||+++++|.+++.....   ..+++.....
T Consensus        30 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~  104 (255)
T cd08219          30 MKEIRLPKSSSAVEDSR--KEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRG---KLFPEDTILQ  104 (255)
T ss_pred             EEEEEcCcchHHHHHHH--HHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccC---CCCCHHHHHH
Confidence            7776543222   4566  899999999999999999999999999999999999999998864322   2578888999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++.|++.||.|||   +++++|+||+|+||++++++.+                     .|++.|+|||++.+..++.++
T Consensus       105 ~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  181 (255)
T cd08219         105 WFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKS  181 (255)
T ss_pred             HHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchh
Confidence            9999999999999   9999999999999999876532                     366779999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||||+++|+|++|+.|
T Consensus       182 Dv~slG~i~~~l~~g~~p  199 (255)
T cd08219         182 DIWSLGCILYELCTLKHP  199 (255)
T ss_pred             hhhhhchhheehhhccCC
Confidence            999999999999999887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=4e-27  Score=192.05  Aligned_cols=149  Identities=25%  Similarity=0.446  Sum_probs=125.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCC-----CcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQ-----LEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~-----~~~l~~  145 (227)
                      +|.+......   ..+.  +|+.+++.++||||+++++++......++||||+++|+|.+++.......     ...+++
T Consensus        41 ik~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  118 (277)
T cd05032          41 IKTVNENASMRERIEFL--NEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL  118 (277)
T ss_pred             EEecCCccCHHHHHHHH--HHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCH
Confidence            7776544332   3566  99999999999999999999999999999999999999999986533211     124678


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+                       .++..|+|||.+..
T Consensus       119 ~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  195 (277)
T cd05032         119 QKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (277)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc
Confidence            889999999999999999   9999999999999999876543                       23457999999988


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..++.++|+|||||++||++| |+.|
T Consensus       196 ~~~~~~~Di~slG~il~el~t~g~~p  221 (277)
T cd05032         196 GVFTTKSDVWSFGVVLWEMATLAEQP  221 (277)
T ss_pred             CCCCcccchHHHHHHHHHhhccCCCC
Confidence            889999999999999999998 7765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.94  E-value=8e-27  Score=191.04  Aligned_cols=146  Identities=18%  Similarity=0.304  Sum_probs=122.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++..++..++||||++ ++|.+++......  ..+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~--~~~~~~~~~  104 (285)
T cd07861          30 MKKIRLESEEEGVPSTAI--REISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKG--QYMDAELVK  104 (285)
T ss_pred             EEEeccccccCCchHHHH--HHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCC--CcCCHHHHH
Confidence            7777543322    3455  89999999999999999999999999999999997 6898888653321  268899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||+|||   +.+++|+||+|+||++++++.+                     .+++.|+|||.+.+. .++.
T Consensus       105 ~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (285)
T cd07861         105 SYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYST  181 (285)
T ss_pred             HHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCc
Confidence            99999999999999   9999999999999999877643                     246789999988654 4788


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|+||++|
T Consensus       182 ~~Dv~slG~il~~l~tg~~~  201 (285)
T cd07861         182 PVDIWSIGTIFAEMATKKPL  201 (285)
T ss_pred             HHHHHHHHHHHHHHHHCCCC
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.9e-28  Score=203.52  Aligned_cols=130  Identities=21%  Similarity=0.286  Sum_probs=115.1

Q ss_pred             hHHHHHhcC---CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292           90 NCIAFASQM---SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus        90 ~Ei~~l~~l---~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                      +|..++.+.   .||||+++++.+...+..++||||+++|+|.+++....     .+++..+..++.|++.||+|||   
T Consensus        42 ~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qil~al~~LH---  113 (330)
T cd05586          42 GERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG-----RFSEDRAKFYIAELVLALEHLH---  113 (330)
T ss_pred             HHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---
Confidence            566666655   79999999999999999999999999999999887543     6889999999999999999999   


Q ss_pred             CCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCchhhHHHHHHHHHHHHhC
Q 040292          167 SRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       167 ~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg  224 (227)
                      +++++||||||+||+++.++.+                     +||+.|+|||.+.+. .++.++||||+||++|+|++|
T Consensus       114 ~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG  193 (330)
T cd05586         114 KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCG  193 (330)
T ss_pred             HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccC
Confidence            9999999999999999876432                     478899999998765 478999999999999999999


Q ss_pred             CCC
Q 040292          225 KKG  227 (227)
Q Consensus       225 ~~p  227 (227)
                      +.|
T Consensus       194 ~~P  196 (330)
T cd05586         194 WSP  196 (330)
T ss_pred             CCC
Confidence            877

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=3.8e-27  Score=207.59  Aligned_cols=148  Identities=22%  Similarity=0.284  Sum_probs=124.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC--------cceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE--------VPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--------~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.+......    ..+.  +|+.++..++|+|++++++.+...+        ..++||||+++|+|.+++....... .
T Consensus        62 vK~i~~~~~~~~~~~~~~--~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~-~  138 (496)
T PTZ00283         62 VKVVDMEGMSEADKNRAQ--AEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTN-R  138 (496)
T ss_pred             EEEEecccCCHHHHHHHH--HHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccC-C
Confidence            8888654332    2444  8999999999999999988775432        2579999999999999987543211 2


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPE  198 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE  198 (227)
                      ++++..+..++.|++.||.|||   +++++||||||+||+++.++.+                       +||+.|+|||
T Consensus       139 ~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE  215 (496)
T PTZ00283        139 TFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPE  215 (496)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHH
Confidence            6889999999999999999999   9999999999999999876432                       4788999999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.+..++.++|||||||++|||++|+.|
T Consensus       216 ~~~~~~~s~k~DVwSlGvilyeLltG~~P  244 (496)
T PTZ00283        216 IWRRKPYSKKADMFSLGVLLYELLTLKRP  244 (496)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            99988899999999999999999999987

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=3.4e-27  Score=195.18  Aligned_cols=143  Identities=22%  Similarity=0.408  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.++..++||||+++++++..++..++|+||+++++|.+++...      .+++..+..+
T Consensus        51 iK~~~~~~~~~~~~~~--~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~------~~~~~~~~~~  122 (297)
T cd06659          51 VKMMDLRKQQRRELLF--NEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQT------RLNEEQIATV  122 (297)
T ss_pred             EEEEEecccchHHHHH--HHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhc------CCCHHHHHHH
Confidence            7877543332  3455  9999999999999999999999999999999999999999887542      5788999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||.|||   +.+++|+||+|+||+++.++.+                     .++..|+|||.+.+..++.++|
T Consensus       123 ~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (297)
T cd06659         123 CESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVD  199 (297)
T ss_pred             HHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhh
Confidence            999999999999   9999999999999999876532                     4677899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|||++|+.|
T Consensus       200 v~slG~il~el~~g~~p  216 (297)
T cd06659         200 IWSLGIMVIEMVDGEPP  216 (297)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=5.2e-27  Score=192.30  Aligned_cols=144  Identities=26%  Similarity=0.441  Sum_probs=121.2

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++...  ...++|+||+++++|.+++.....    .+++..+.
T Consensus        38 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~l~~~~~~  111 (284)
T cd05081          38 VKKLQHSTAEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRE----RLDHRKLL  111 (284)
T ss_pred             EEEeccCCHHHHHHHH--HHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCc----CCCHHHHH
Confidence            7877655433  4566  999999999999999999987643  457899999999999999975432    57899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee------------------------cccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI------------------------GTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~------------------------g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||.|||   +++++||||||+||++++++.+.                        ++..|+|||.+.+..+
T Consensus       112 ~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  188 (284)
T cd05081         112 LYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKF  188 (284)
T ss_pred             HHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCc
Confidence            99999999999999   99999999999999998765430                        1224899999988889


Q ss_pred             CchhhHHHHHHHHHHHHhCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~  226 (227)
                      +.++|+||||+++|||++|..
T Consensus       189 ~~~~Di~slG~~l~el~~~~~  209 (284)
T cd05081         189 SVASDVWSFGVVLYELFTYSD  209 (284)
T ss_pred             ChHHHHHHHHHHHHHHhhcCC
Confidence            999999999999999999754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=8.8e-27  Score=189.71  Aligned_cols=146  Identities=22%  Similarity=0.341  Sum_probs=117.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.|.  +|+.+++.++||||+++++.|......++||||+++|+|.+++...... ....++.....
T Consensus        27 ~k~~~~~~~~~~~~~~~--~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~  103 (268)
T cd05086          27 VKELKANASSKEQNEFL--QQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWH-RRNSQLLLLQR  103 (268)
T ss_pred             EEEecCCCChHHHHHHH--HHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcc-cccccHHHHHH
Confidence            5555443322   4566  9999999999999999999999999999999999999999999754211 12456667788


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC-----
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT-----  202 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~-----  202 (227)
                      ++.|++.||+|||   +.+++||||||+||+++.++.+                       .++..|+|||++..     
T Consensus       104 ~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  180 (268)
T cd05086         104 MACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGL  180 (268)
T ss_pred             HHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCcc
Confidence            9999999999999   8999999999999999765432                       34567999998743     


Q ss_pred             --CCCCchhhHHHHHHHHHHHHhCC
Q 040292          203 --GNCNEKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       203 --~~~~~~~DvwS~G~il~el~tg~  225 (227)
                        ..++.++|+||||+++|||+++.
T Consensus       181 ~~~~~~~~~DiwslG~~l~el~~~~  205 (268)
T cd05086         181 ITAEQTKPSNVWALGVTLWELFENA  205 (268)
T ss_pred             ccCCCCCcchhHHHHHHHHHHHhCC
Confidence              23577899999999999999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.94  E-value=4.5e-27  Score=189.67  Aligned_cols=145  Identities=22%  Similarity=0.436  Sum_probs=123.6

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      +|.++.....+.+.  +|+.++++++|||++++++++... ..++||||+++++|.+++.....   ..+++..+..++.
T Consensus        34 iK~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~  107 (254)
T cd05083          34 VKNIKCDVTAQAFL--EETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGR---ALVSVIQLLQFSL  107 (254)
T ss_pred             EEeecCcchHHHHH--HHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCc---CCCCHHHHHHHHH
Confidence            78776654446677  999999999999999999998654 57999999999999999975432   2578888999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhhHHHHH
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSDVYSFG  215 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G  215 (227)
                      |++.||.|||   +.+++||||+|+|++++.++.+                  ..+..|+|||.+.+..++.++|+||||
T Consensus       108 qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG  184 (254)
T cd05083         108 DVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYG  184 (254)
T ss_pred             HHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHH
Confidence            9999999999   9999999999999999876643                  123459999999888899999999999


Q ss_pred             HHHHHHHh-CCCC
Q 040292          216 ALLLELLT-GKKG  227 (227)
Q Consensus       216 ~il~el~t-g~~p  227 (227)
                      +++|+|++ |+.|
T Consensus       185 ~~l~el~~~g~~p  197 (254)
T cd05083         185 VLLWEVFSYGRAP  197 (254)
T ss_pred             HHHHHHHhCCCCC
Confidence            99999997 7765

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.94  E-value=6.5e-27  Score=189.40  Aligned_cols=145  Identities=24%  Similarity=0.394  Sum_probs=122.7

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +.+.  +|+.++++++|||++++++++. ....+++|||+++++|.+++.....   ..+++..+..++
T Consensus        35 ~k~~~~~~~~~~~~~--~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~  108 (260)
T cd05070          35 VKTLKPGTMSPESFL--EEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEG---RALKLPNLVDMA  108 (260)
T ss_pred             EEEecCCCCCHHHHH--HHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCC---CCCCHHHHHHHH
Confidence            7777654333 5677  9999999999999999999875 4568899999999999999875321   257889999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +++++|+||+|+|+++++++.+                      .++..|+|||......++.++|
T Consensus       109 ~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  185 (260)
T cd05070         109 AQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhh
Confidence            99999999999   8999999999999999876533                      1234699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|+|++ |..|
T Consensus       186 i~slG~~l~~l~~~g~~p  203 (260)
T cd05070         186 VWSFGILLTELVTKGRVP  203 (260)
T ss_pred             hHHHHHHHHHHHhcCCCC
Confidence            9999999999999 7665

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.94  E-value=6.9e-27  Score=190.13  Aligned_cols=145  Identities=23%  Similarity=0.398  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   ++|.  +|+.++++++||||+++.+++..+...++||||+++++|.+++....+    .+++..+..
T Consensus        37 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~  110 (269)
T cd05065          37 IKTLKSGYTEKQRRDFL--SEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDG----QFTVIQLVG  110 (269)
T ss_pred             EEEcCCCCCHHHHHHHH--HHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCC----CCCHHHHHH
Confidence            7777654322   4677  999999999999999999999999999999999999999999876432    578899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee--------------------------cccCccccccccCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI--------------------------GTFGFIAPECITTGN  204 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~--------------------------g~~~y~aPE~~~~~~  204 (227)
                      ++.|++.||.|||   +++++|+||+|+|++++.++.+.                          .+..|+|||.+....
T Consensus       111 i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  187 (269)
T cd05065         111 MLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRK  187 (269)
T ss_pred             HHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCc
Confidence            9999999999999   99999999999999998754320                          023599999998888


Q ss_pred             CCchhhHHHHHHHHHHHHh-CCCC
Q 040292          205 CNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++.++||||||+++||+++ |..|
T Consensus       188 ~~~~~DvwslG~~l~e~l~~g~~p  211 (269)
T cd05065         188 FTSASDVWSYGIVMWEVMSYGERP  211 (269)
T ss_pred             ccchhhhhhhHHHHHHHhcCCCCC
Confidence            9999999999999999886 8765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=3.5e-27  Score=199.95  Aligned_cols=129  Identities=22%  Similarity=0.414  Sum_probs=116.1

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      .|+.++++++||||+++++++..++..++|+|++. ++|.+++.....    ++++..+..++.|++.||.|||   .++
T Consensus       106 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~  177 (357)
T PHA03209        106 IEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSR----PLPIDQALIIEKQILEGLRYLH---AQR  177 (357)
T ss_pred             HHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            89999999999999999999999999999999995 688888865432    6889999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      |+||||||+||+++.++.+                    .||+.|+|||++.+..++.++|+|||||++|||+++..
T Consensus       178 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~  254 (357)
T PHA03209        178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPS  254 (357)
T ss_pred             eecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCC
Confidence            9999999999999875532                    47888999999998889999999999999999998643

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.94  E-value=3.6e-27  Score=200.85  Aligned_cols=143  Identities=24%  Similarity=0.346  Sum_probs=121.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.+......    +.+.  +|+.+++.++||||+++++++...+     ..|+|+||+. ++|.+.+....     .++
T Consensus        30 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----~l~  101 (372)
T cd07853          30 LKKMPNVFQNLVSCKRVF--RELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQ-----PLS  101 (372)
T ss_pred             EEeccccccchHHHHHHH--HHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCC-----CCC
Confidence            7877543222    3455  9999999999999999999998766     6899999996 68888876543     688


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccC
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~  202 (227)
                      +..+..++.|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+.+
T Consensus       102 ~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         102 SDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcC
Confidence            9999999999999999999   9999999999999999876533                      35678999999876


Q ss_pred             C-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 G-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      . .++.++||||+||++|||++|+.|
T Consensus       179 ~~~~~~~~DiwslG~il~el~~g~~p  204 (372)
T cd07853         179 SRHYTSAVDIWSVGCIFAELLGRRIL  204 (372)
T ss_pred             CCCCCcHHHHHhHHHHHHHHHcCCCC
Confidence            5 478999999999999999999876

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.94  E-value=8.1e-27  Score=188.18  Aligned_cols=146  Identities=28%  Similarity=0.425  Sum_probs=126.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +++.  +|+.++++++|+||+++++++.+.+..+++|||+++++|.+++.....   ..+++..+.
T Consensus        30 ~k~~~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~---~~~~~~~~~  104 (256)
T cd08221          30 WKEVNLTRLSEKERRDAL--NEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKG---QLFEEEMVL  104 (256)
T ss_pred             EEEEeecccchhHHHHHH--HHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccc---cCCCHHHHH
Confidence            7776543222    4566  999999999999999999999999999999999999999999976421   257889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++.+                     .+++.|.|||.+.+..++.+
T Consensus       105 ~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~  181 (256)
T cd08221         105 WYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFK  181 (256)
T ss_pred             HHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCc
Confidence            99999999999999   8999999999999999876532                     46788999999988888899


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||||+++|+|++|..|
T Consensus       182 ~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08221         182 SDIWALGCVLYELLTLKRT  200 (256)
T ss_pred             chhHHHHHHHHHHHHCCCC
Confidence            9999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.94  E-value=9.2e-27  Score=189.47  Aligned_cols=149  Identities=24%  Similarity=0.446  Sum_probs=119.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCC-CCCCcc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPN-GSQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~-~~~~~~  142 (227)
                      ||.++.....    +.+.  +|+.++++++||||+++++++...      ...++++||+++|+|.+++.... ......
T Consensus        31 ~k~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~  108 (272)
T cd05075          31 VKTMKIAICTRSEMEDFL--SEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQY  108 (272)
T ss_pred             EEecccCcCCHHHHHHHH--HHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCccc
Confidence            6666543222    4566  899999999999999999988542      24689999999999998874321 112235


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccccc
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPEC  199 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~  199 (227)
                      +++.....++.|++.||+|||   +++++||||||+||++++++.+                       .+++.|++||.
T Consensus       109 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~  185 (272)
T cd05075         109 LPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIES  185 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHH
Confidence            889999999999999999999   8999999999999999875432                       13446999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .....++.++|+||||+++|||++ |+.|
T Consensus       186 ~~~~~~~~~~Di~slG~il~el~~~g~~p  214 (272)
T cd05075         186 LADRVYTTKSDVWSFGVTMWEIATRGQTP  214 (272)
T ss_pred             ccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence            988889999999999999999999 6654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.94  E-value=6.6e-27  Score=192.67  Aligned_cols=145  Identities=24%  Similarity=0.397  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCC------CcccC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQ------LEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~------~~~l~  144 (227)
                      +|.+......   +++.  +|+.++++++||||+++++++..++..++++||+++++|.+++.......      ...++
T Consensus        51 ~K~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  128 (296)
T cd05051          51 VKVLRPDASDNAREDFL--KEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLS  128 (296)
T ss_pred             EEEecCccCHHHHHHHH--HHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCC
Confidence            7777655433   4566  89999999999999999999999999999999999999999987543211      12588


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECIT  201 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~  201 (227)
                      +..+..++.|++.||.|||   +.+++|+||||+|+++++++.+                       .+++.|+|||.+.
T Consensus       129 ~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (296)
T cd05051         129 FSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL  205 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh
Confidence            9999999999999999999   9999999999999999876432                       2345799999998


Q ss_pred             CCCCCchhhHHHHHHHHHHHHh
Q 040292          202 TGNCNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~t  223 (227)
                      ...++.++|||||||++|||++
T Consensus       206 ~~~~~~~~Dv~slG~~l~el~~  227 (296)
T cd05051         206 LGKFTTKSDVWAFGVTLWEILT  227 (296)
T ss_pred             cCCCCccchhhhhHHHHHHHHh
Confidence            8889999999999999999998

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.94  E-value=7.8e-27  Score=193.30  Aligned_cols=149  Identities=22%  Similarity=0.427  Sum_probs=123.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      +|.+......   +++.  +|+.+++.+ +||||+++++++...+..++||||+++|+|.+++......           
T Consensus        52 iK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  129 (304)
T cd05101          52 VKMLKDDATEKDLSDLV--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARV  129 (304)
T ss_pred             eeecccccchHHHHHHH--HHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccC
Confidence            6666543222   4566  999999999 8999999999999999999999999999999999754211           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||.|||   +++++||||||+||+++.++.+                       .+++.|+
T Consensus       130 ~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~  206 (304)
T cd05101         130 PDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWM  206 (304)
T ss_pred             CcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceee
Confidence            1125788889999999999999999   9999999999999999875532                       1235699


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||++.+..++.++||||||+++|++++ |..|
T Consensus       207 aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p  239 (304)
T cd05101         207 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP  239 (304)
T ss_pred             CchhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            9999988889999999999999999998 5544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=9.4e-27  Score=188.43  Aligned_cols=144  Identities=25%  Similarity=0.433  Sum_probs=118.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEee-CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......   +.+.  +|+.+++.++||||+++++++.. ++..++|+||+++|+|.+++.....    ...+....
T Consensus        28 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~  101 (262)
T cd05058          28 VKSLNRITDLEEVEQFL--KEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETH----NPTVKDLI  101 (262)
T ss_pred             EEecCccCCHHHHHHHH--HHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCC----CCCHHHHH
Confidence            6766443222   3555  89999999999999999998764 5568899999999999999975432    45677788


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~  204 (227)
                      .++.|++.||.|||   +.+++||||||+||++++++.+                         .++..|+|||......
T Consensus       102 ~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  178 (262)
T cd05058         102 GFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQK  178 (262)
T ss_pred             HHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCc
Confidence            89999999999999   9999999999999999876533                         1244699999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~  226 (227)
                      ++.++||||||+++|||++|..
T Consensus       179 ~~~~~Di~slG~~l~el~~~~~  200 (262)
T cd05058         179 FTTKSDVWSFGVLLWELMTRGA  200 (262)
T ss_pred             cchHHHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999643

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.94  E-value=7.4e-27  Score=195.61  Aligned_cols=146  Identities=19%  Similarity=0.231  Sum_probs=122.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.+++.++||||++++++|..++..++|+||+.+++|.+++.....   ..+++..+.
T Consensus        30 iK~~~~~~~~~~~~~~~~--~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~---~~~~~~~~~  104 (328)
T cd08226          30 VRITDLENCTEEHLKALQ--NEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFP---EGMSEALIG  104 (328)
T ss_pred             EEEeccccCCHHHHHHHH--HHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcc---cCCCHHHHH
Confidence            7777654322    3455  899999999999999999999999999999999999999998875431   247888889


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------ecccCcccccccc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------~g~~~y~aPE~~~  201 (227)
                      .++.|++.||+|||   +.+++||||||+||+++.++.+                            .++..|+|||++.
T Consensus       105 ~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (328)
T cd08226         105 NILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLR  181 (328)
T ss_pred             HHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhc
Confidence            99999999999999   9999999999999999865422                            1234599999997


Q ss_pred             CC--CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TG--NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~--~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.  .++.++|+|||||++|+|++|+.|
T Consensus       182 ~~~~~~~~~~DiwslG~~l~el~~g~~p  209 (328)
T cd08226         182 QDLYGYNVKSDIYSVGITACELATGRVP  209 (328)
T ss_pred             CCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            64  478999999999999999999876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.94  E-value=1.6e-26  Score=187.18  Aligned_cols=145  Identities=26%  Similarity=0.397  Sum_probs=122.1

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +.+.  +|+.++++++|||++++++++. .+..+++|||+++++|.+++.....   ..+++..+..++
T Consensus        35 lK~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~  108 (260)
T cd05069          35 IKTLKPGTMMPEAFL--QEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDG---KYLKLPQLVDMA  108 (260)
T ss_pred             EEEcccCCccHHHHH--HHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCC---CCCCHHHHHHHH
Confidence            7776544333 5677  9999999999999999999875 4568899999999999999975321   257888999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++|+||+|+|+++++++.+                      .++..|+|||......++.++|
T Consensus       109 ~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~D  185 (260)
T cd05069         109 AQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHH
Confidence            99999999999   8999999999999999876533                      1334699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|+|+| |+.|
T Consensus       186 i~slG~~l~el~t~g~~p  203 (260)
T cd05069         186 VWSFGILLTELVTKGRVP  203 (260)
T ss_pred             HHHHHHHHHHHHhCCCCC
Confidence            9999999999999 7765

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.94  E-value=6.6e-27  Score=189.43  Aligned_cols=144  Identities=25%  Similarity=0.345  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.++++++||||+++++.+..++..++|+||+++++|.+++....     .+++..+
T Consensus        23 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~   95 (262)
T cd05572          23 LKCVKKRHIVETGQQEHIF--SEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRG-----LFDEYTA   95 (262)
T ss_pred             EEEEehhcchhhhHHHHHH--HHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcC-----CCCHHHH
Confidence            7777643321     3566  99999999999999999999999999999999999999999997643     5788899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||.|||   +.+++|+||+|+||+++.++.+                    .+++.|++||.+....++.+
T Consensus        96 ~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  172 (262)
T cd05572          96 RFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFS  172 (262)
T ss_pred             HHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCCh
Confidence            999999999999999   9999999999999999876533                    35778999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|+|++|..|
T Consensus       173 ~Di~slG~il~~l~~g~~p  191 (262)
T cd05572         173 VDYWSLGILLYELLTGRPP  191 (262)
T ss_pred             hhhhhhHHHHHHHHhCCCC
Confidence            9999999999999999987

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.94  E-value=5.2e-27  Score=189.28  Aligned_cols=145  Identities=27%  Similarity=0.503  Sum_probs=124.9

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... .+|.  +|+.++++++|||++++++++......++|+||+++++|.+++.....    ++++..+..++
T Consensus        33 ~k~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~  106 (256)
T cd05112          33 IKTIREGAMSEEDFI--EEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRG----KFSQETLLGMC  106 (256)
T ss_pred             EEECCCCCCCHHHHH--HHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCcc----CCCHHHHHHHH
Confidence            7777654333 5677  999999999999999999999999999999999999999999875432    57888999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.|++|||   +.+++|+||+|+|++++.++.+                      .++..|+|||.+.+..++.++|
T Consensus       107 ~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~D  183 (256)
T cd05112         107 LDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHH
Confidence            99999999999   8999999999999999875532                      1234699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|||++ |..|
T Consensus       184 v~slG~~l~el~~~g~~p  201 (256)
T cd05112         184 VWSFGVLMWEVFSEGKTP  201 (256)
T ss_pred             HHHHHHHHHHHHcCCCCC
Confidence            9999999999998 7765

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.94  E-value=8.5e-27  Score=190.07  Aligned_cols=149  Identities=23%  Similarity=0.469  Sum_probs=125.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCC----CcccCHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQ----LEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~----~~~l~~~  146 (227)
                      +|.+......   +++.  +|+.++++++||||+++++++...+..++||||+++|+|.+++.......    ..++++.
T Consensus        40 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~  117 (275)
T cd05046          40 VKALQKTKDENLQSEFR--RELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTK  117 (275)
T ss_pred             EEccCCccchHHHHHHH--HHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHH
Confidence            6666544333   4577  99999999999999999999998889999999999999999997543111    1258899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~  204 (227)
                      .+..++.|++.||.|||   +.+++||||||+|++++.++.+                      .++..|++||.+.+..
T Consensus       118 ~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  194 (275)
T cd05046         118 QKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDD  194 (275)
T ss_pred             HHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCC
Confidence            99999999999999999   9999999999999999876543                      2345599999998888


Q ss_pred             CCchhhHHHHHHHHHHHHh-CCCC
Q 040292          205 CNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+.++|+||||+++|++++ |..|
T Consensus       195 ~~~~~Di~slG~~l~~l~~~~~~p  218 (275)
T cd05046         195 FSTKSDVWSFGVLMWEVFTQGELP  218 (275)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCC
Confidence            8999999999999999998 5543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=7.8e-27  Score=189.41  Aligned_cols=133  Identities=26%  Similarity=0.415  Sum_probs=116.8

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      .+.  +|+.++++++||||+++++++.+.  ...+++|||+++++|.+++....     .+++.....++.|++.||.||
T Consensus        50 ~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~l  122 (265)
T cd06652          50 ALE--CEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYG-----ALTENVTRKYTRQILEGVSYL  122 (265)
T ss_pred             HHH--HHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHH
Confidence            445  899999999999999999988764  45779999999999999987543     577888899999999999999


Q ss_pred             hhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCCchhhHHHHHHHH
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALL  218 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il  218 (227)
                      |   +.+++|+||+|+||++++++.+                        .++..|+|||.+.+..++.++|+||||+++
T Consensus       123 H---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il  199 (265)
T cd06652         123 H---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV  199 (265)
T ss_pred             H---hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHH
Confidence            9   9999999999999999875432                        256679999999888889999999999999


Q ss_pred             HHHHhCCCC
Q 040292          219 LELLTGKKG  227 (227)
Q Consensus       219 ~el~tg~~p  227 (227)
                      |+|++|+.|
T Consensus       200 ~el~~g~~p  208 (265)
T cd06652         200 VEMLTEKPP  208 (265)
T ss_pred             HHHhhCCCC
Confidence            999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.3e-26  Score=189.61  Aligned_cols=144  Identities=23%  Similarity=0.390  Sum_probs=123.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   .++.  +|+.++++++||||++++++|.. ...++|+||+++|+|.+++.....    .+++..+..
T Consensus        41 ik~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~----~~~~~~~~~  113 (279)
T cd05057          41 IKVLREETSPKANKEIL--DEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKD----NIGSQYLLN  113 (279)
T ss_pred             EEeccCCCCHHHHHHHH--HHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccC----CCCHHHHHH
Confidence            5666544332   3556  99999999999999999999987 788999999999999999976432    588999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||+|||   +.+++|+||+|+|+++++++.+                       .++..|+|||.+....++.
T Consensus       114 ~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  190 (279)
T cd05057         114 WCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTH  190 (279)
T ss_pred             HHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCc
Confidence            9999999999999   8999999999999999876533                       0134699999998888899


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|+||||+++||+++ |+.|
T Consensus       191 ~~Di~slG~~l~el~~~g~~p  211 (279)
T cd05057         191 KSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             hhhHHHHHHHHHHHhcCCCCC
Confidence            9999999999999998 8876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=1e-26  Score=187.87  Aligned_cols=143  Identities=26%  Similarity=0.456  Sum_probs=122.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +++.  +|+.+++++.||||+++++++. .+..++||||+++|+|.+++....     .+++..+..
T Consensus        28 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~   99 (257)
T cd05060          28 VKTLKQEHIAAGKKEFL--REASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRR-----EIPVSDLKE   99 (257)
T ss_pred             EEecccccchHHHHHHH--HHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCC-----CCCHHHHHH
Confidence            7777655442   4566  9999999999999999999876 456899999999999999997653     578999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||.|||   ..+++|+||||+|++++.++.+                        .++..|+|||.+....++
T Consensus       100 ~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  176 (257)
T cd05060         100 LAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFS  176 (257)
T ss_pred             HHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCC
Confidence            9999999999999   8999999999999999876643                        012469999999888899


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++|+||||+++|+|++ |.+|
T Consensus       177 ~~~Di~slG~~l~~~~~~g~~p  198 (257)
T cd05060         177 SKSDVWSYGVTLWEAFSYGAKP  198 (257)
T ss_pred             ccchHHHHHHHHHHHHcCCCCC
Confidence            99999999999999998 8776

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.94  E-value=1.2e-26  Score=190.36  Aligned_cols=145  Identities=25%  Similarity=0.376  Sum_probs=128.1

Q ss_pred             eEEEcCCCC-cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLN-TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+..... .+.+.  +|+..+++++|+|++++++.+...+..++|+||+++++|.+++....    ..+++..+..++
T Consensus        49 iK~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~i~  122 (286)
T cd06614          49 IKKMRLRKQNKELII--NEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNF----VRMNEPQIAYVC  122 (286)
T ss_pred             EEEEecCchhHHHHH--HHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhc----cCCCHHHHHHHH
Confidence            788775544 34566  99999999999999999999999999999999999999999998653    268899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhH
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDV  211 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~Dv  211 (227)
                      .|++.||.|||   +.+++|+||+|+||+++.++.+                     .++..|++||.+.+..++.++|+
T Consensus       123 ~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv  199 (286)
T cd06614         123 REVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDI  199 (286)
T ss_pred             HHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCcccc
Confidence            99999999999   8999999999999999876543                     25567999999988888999999


Q ss_pred             HHHHHHHHHHHhCCCC
Q 040292          212 YSFGALLLELLTGKKG  227 (227)
Q Consensus       212 wS~G~il~el~tg~~p  227 (227)
                      ||||+++|+|++|+.|
T Consensus       200 ~slGvil~~l~~g~~p  215 (286)
T cd06614         200 WSLGIMCIEMAEGEPP  215 (286)
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.94  E-value=8.7e-27  Score=190.86  Aligned_cols=149  Identities=20%  Similarity=0.366  Sum_probs=124.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----------CC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----------SQ  139 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----------~~  139 (227)
                      ||.++.....   +.+.  +|+.++++++||||+++++++...+..++++||+++++|.+++.....           ..
T Consensus        40 iK~~~~~~~~~~~~~~~--~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  117 (283)
T cd05091          40 IKTLKDKAEGPLREEFK--HEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTV  117 (283)
T ss_pred             EEEccCCCCHHHHHHHH--HHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCcccccccccccc
Confidence            7887754433   3466  899999999999999999999999999999999999999999853211           00


Q ss_pred             CcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccc
Q 040292          140 LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIA  196 (227)
Q Consensus       140 ~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~a  196 (227)
                      ...+++..+..++.|++.||.|||   +++++||||||+|+++++++.+                       .+++.|+|
T Consensus       118 ~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~a  194 (283)
T cd05091         118 KSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMS  194 (283)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccC
Confidence            124788889999999999999999   9999999999999999875432                       23457999


Q ss_pred             cccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          197 PECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       197 PE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ||.+....++.++||||||+++|||++ |..|
T Consensus       195 PE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p  226 (283)
T cd05091         195 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP  226 (283)
T ss_pred             HHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence            999988889999999999999999998 6554

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.94  E-value=8.9e-27  Score=192.71  Aligned_cols=144  Identities=19%  Similarity=0.349  Sum_probs=122.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.++++++||||+++++++..++..++||||++ ++|.+++.....    .+++..+..
T Consensus        36 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~~~~~~~~~  108 (301)
T cd07873          36 LKEIRLEHEEGAPCTAI--REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN----SINMHNVKL  108 (301)
T ss_pred             EEEEecccccCchhHHH--HHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCC----CCCHHHHHH
Confidence            7777643322   2444  89999999999999999999999999999999997 689888865432    578889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~~  208 (227)
                      ++.|++.||.|||   +.+++|+||||+||++++++.+                     .+++.|+|||.+.+. .++.+
T Consensus       109 ~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  185 (301)
T cd07873         109 FLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQ  185 (301)
T ss_pred             HHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccH
Confidence            9999999999999   9999999999999999876533                     356779999988654 47889


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||||+++|+|++|++|
T Consensus       186 ~Dv~slG~~l~el~tg~~~  204 (301)
T cd07873         186 IDMWGVGCIFYEMSTGRPL  204 (301)
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999876

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.94  E-value=9.5e-27  Score=187.55  Aligned_cols=149  Identities=27%  Similarity=0.497  Sum_probs=127.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC----CCcccCHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS----QLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~----~~~~l~~~  146 (227)
                      ||.+......   +.+.  +|+..++.++|+||+++++++......++||||+++++|.+++......    ....+++.
T Consensus        28 ik~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  105 (262)
T cd00192          28 VKTLKEDASEEERKDFL--KEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLK  105 (262)
T ss_pred             eEeeccccchhHHHHHH--HHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHH
Confidence            7877765543   4566  9999999999999999999999989999999999999999999865211    01268999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~  203 (227)
                      .+..++.|++.||+|||   +++++|+||+|+||++++++.+                       .+++.|+|||.+...
T Consensus       106 ~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (262)
T cd00192         106 DLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDG  182 (262)
T ss_pred             HHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccC
Confidence            99999999999999999   9999999999999999986533                       245679999999888


Q ss_pred             CCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          204 NCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++.++|+||+|+++|+|++ |..|
T Consensus       183 ~~~~~~Di~slG~il~~l~~~g~~p  207 (262)
T cd00192         183 IFTSKSDVWSFGVLLWEIFTLGATP  207 (262)
T ss_pred             CcchhhccHHHHHHHHHHHhcCCCC
Confidence            89999999999999999999 4665

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=1.4e-27  Score=205.01  Aligned_cols=144  Identities=24%  Similarity=0.344  Sum_probs=128.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+++|..++|||||+++.+...+..+|+||||+.+|.+++++...+     ...+..+.
T Consensus        86 iK~idkt~ln~~~~~k~~--rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~g-----r~~e~~ar  158 (596)
T KOG0586|consen   86 IKIIDKTQLNPSKRQKLG--REVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHG-----RMKEKEAR  158 (596)
T ss_pred             EEEehhcccChHHHHHHH--HHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcc-----cchhhhhh
Confidence            8877766544    3455  99999999999999999999999999999999999999999998776     46668889


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCC-Cch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNC-NEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~-~~~  208 (227)
                      .++.|+.++++|||   ++.|+|||||++|++++.+..+                    +|++.|.|||++.+..| ++.
T Consensus       159 ~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe  235 (596)
T KOG0586|consen  159 AKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPE  235 (596)
T ss_pred             hhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcc
Confidence            99999999999999   9999999999999999876532                    79999999999998876 688


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|.|+.|..|
T Consensus       236 ~D~Wslgvvly~LV~GsLP  254 (596)
T KOG0586|consen  236 VDIWSLGVVLYALVEGSLP  254 (596)
T ss_pred             eehhhhhhhheeeeecccc
Confidence            9999999999999999876

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=7.3e-27  Score=191.63  Aligned_cols=145  Identities=26%  Similarity=0.423  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.+++.++||||+++++++...+..++|+||+++++|.+++...+     ++++..+..
T Consensus        35 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~  107 (284)
T cd06620          35 KKVVHIGAKSSVRKQIL--RELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGG-----PIPVEILGK  107 (284)
T ss_pred             EEEEEecCcchHHHHHH--HHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhcc-----CCCHHHHHH
Confidence            6665543222   4566  99999999999999999999999999999999999999999887543     688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhhH
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSDV  211 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~Dv  211 (227)
                      ++.+++.||.|||+  ..+++|+||+|+|+++++++.+                   .|+..|+|||++.+..++.++|+
T Consensus       108 ~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di  185 (284)
T cd06620         108 IAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDV  185 (284)
T ss_pred             HHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchH
Confidence            99999999999993  3589999999999999876532                   46788999999988888999999


Q ss_pred             HHHHHHHHHHHhCCCC
Q 040292          212 YSFGALLLELLTGKKG  227 (227)
Q Consensus       212 wS~G~il~el~tg~~p  227 (227)
                      |||||++|++++|+.|
T Consensus       186 ~slG~~l~~l~tg~~p  201 (284)
T cd06620         186 WSLGISIIELALGKFP  201 (284)
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=7.6e-27  Score=189.12  Aligned_cols=145  Identities=24%  Similarity=0.422  Sum_probs=127.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +++.  +|+.++++++||||+++++.+..++..++++||+++++|.+++....    .++++.....
T Consensus        31 ik~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~  104 (265)
T cd06605          31 VKTIRLEINEAIQKQIL--RELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQ----GRIPERILGK  104 (265)
T ss_pred             EEEEecccChHHHHHHH--HHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHcc----CCCCHHHHHH
Confidence            7777655433   3566  99999999999999999999999999999999999999999997543    2688889999


Q ss_pred             HHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.|++.|++|||   + .+++|+||+|+||++++++.+                   .++..|+|||.+.+..++.++|
T Consensus       105 ~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  181 (265)
T cd06605         105 IAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSD  181 (265)
T ss_pred             HHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhh
Confidence            9999999999999   8 999999999999999986543                   3567899999998888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|+|++|+.|
T Consensus       182 v~slG~~l~~l~~g~~p  198 (265)
T cd06605         182 IWSLGLSLIELATGRFP  198 (265)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.94  E-value=8.3e-27  Score=193.48  Aligned_cols=149  Identities=22%  Similarity=0.425  Sum_probs=124.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      +|.+......   .++.  +|+.+++++ +||||++++++|...+..++||||+++|+|.+++......           
T Consensus        55 iK~~~~~~~~~~~~~~~--~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~  132 (307)
T cd05098          55 VKMLKSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQV  132 (307)
T ss_pred             EEeccCCCChHHHHHHH--HHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccC
Confidence            6777654332   3455  899999999 8999999999999999999999999999999999754211           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||+|||   +++++||||||+||+++.++.+                       .+++.|+
T Consensus       133 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~  209 (307)
T cd05098         133 PEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM  209 (307)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCcccee
Confidence            1125788899999999999999999   9999999999999999876533                       1224699


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||.+.+..++.++|+|||||++|||++ |..|
T Consensus       210 aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p  242 (307)
T cd05098         210 APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP  242 (307)
T ss_pred             ChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence            9999988889999999999999999998 6655

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.2e-26  Score=191.35  Aligned_cols=146  Identities=22%  Similarity=0.412  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-------CCCccc
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-------SQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-------~~~~~l  143 (227)
                      ||.++.....   +.|.  +|++++++++|||++++++++...+..++||||+++++|.+++.....       .....+
T Consensus        49 vK~~~~~~~~~~~~~~~--~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  126 (295)
T cd05097          49 VKMLRADVTKTARNDFL--KEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSV  126 (295)
T ss_pred             EEecCCCCCHHHHHHHH--HHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcc
Confidence            7777654322   3566  999999999999999999999999999999999999999998864321       011246


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECI  200 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~  200 (227)
                      ++..+..++.|++.||.|||   +.+++|+||||+|+++++++.+                       .++..|+|||.+
T Consensus       127 ~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  203 (295)
T cd05097         127 SIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESI  203 (295)
T ss_pred             cHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhh
Confidence            78889999999999999999   9999999999999999876432                       124579999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHhC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                      ....++.++|+||||+++|+|+++
T Consensus       204 ~~~~~~~~~DvwSlG~~l~el~~~  227 (295)
T cd05097         204 LLGKFTTASDVWAFGVTLWEMFTL  227 (295)
T ss_pred             ccCCcCchhhHHHHHHHHHHHHHc
Confidence            888899999999999999999984

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=6.2e-27  Score=215.38  Aligned_cols=151  Identities=20%  Similarity=0.341  Sum_probs=120.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+......    ..|.  +|+.+|++++|||||+++++|...  ...|+||||+++|+|.+++...... ...+++..
T Consensus        43 lKvIk~~~l~e~~~~~~~--~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~-~g~L~E~~  119 (1021)
T PTZ00266         43 WKAISYRGLKEREKSQLV--IEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKM-FGKIEEHA  119 (1021)
T ss_pred             EEEEeccccCHHHHHHHH--HHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhc-cCCCCHHH
Confidence            6666543222    3455  999999999999999999988654  4588999999999999998643211 12688999


Q ss_pred             HHHHHHHHHHHHHHhhhcC----CCCeEEecCCCCceeecCCC-------------------------------------
Q 040292          148 RLKVAMEIANAVAYLHVGF----SRPIVFRDIKPFTTHVNDND-------------------------------------  186 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~----~~~i~H~dlkp~nil~~~~~-------------------------------------  186 (227)
                      ++.++.||+.||.|||...    ..+|+||||||+||+++...                                     
T Consensus       120 Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~  199 (1021)
T PTZ00266        120 IVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAH  199 (1021)
T ss_pred             HHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccccc
Confidence            9999999999999999321    14699999999999996421                                     


Q ss_pred             ceecccCccccccccC--CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          187 KLIGTFGFIAPECITT--GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       187 ~~~g~~~y~aPE~~~~--~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ...||+.|+|||++..  ..++.++|||||||++|||+||+.|
T Consensus       200 s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~P  242 (1021)
T PTZ00266        200 SCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTP  242 (1021)
T ss_pred             ccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCC
Confidence            1257889999999854  3478999999999999999999987

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=2.8e-27  Score=192.02  Aligned_cols=144  Identities=23%  Similarity=0.425  Sum_probs=124.8

Q ss_pred             eEEEcCCCC--------cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLN--------TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~--------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      +|.+.....        .+.+.  +|++++++++||||+++++++.+.+..++|+||+++++|.+++....     ++++
T Consensus        30 lk~~~~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-----~~~~  102 (268)
T cd06630          30 VKQVTYVRNTSSEQEEVVEALR--KEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYG-----AFKE  102 (268)
T ss_pred             EEEeecccCCchhHHHHHHHHH--HHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhC-----CCCH
Confidence            777754321        13455  99999999999999999999999999999999999999999987543     6888


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-e-------------------------ecccCcccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-L-------------------------IGTFGFIAPEC  199 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-~-------------------------~g~~~y~aPE~  199 (227)
                      ..+..++.|++.||+|||   +++++|+||+|+||+++.++. +                         .++..|+|||.
T Consensus       103 ~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  179 (268)
T cd06630         103 AVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV  179 (268)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhH
Confidence            999999999999999999   999999999999999976542 1                         34567999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.+..++.++|+||+|++++++++|..|
T Consensus       180 ~~~~~~~~~~Dv~slG~~l~~l~~g~~p  207 (268)
T cd06630         180 LRGEQYGRSCDVWSVGCVIIEMATAKPP  207 (268)
T ss_pred             hccCCCCcccchHHHHHHHHHHHhCCCC
Confidence            9888889999999999999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.94  E-value=6.9e-27  Score=192.37  Aligned_cols=149  Identities=24%  Similarity=0.428  Sum_probs=124.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----------C
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----------S  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----------~  138 (227)
                      +|.+......   .++.  +|+.++.++ +||||+++++++..++..+++|||+++|+|.+++.....           .
T Consensus        47 ~k~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  124 (293)
T cd05053          47 VKMLKDDATEKDLSDLV--SEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRP  124 (293)
T ss_pred             EEEccCCCCHHHHHHHH--HHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccc
Confidence            7777654333   2455  899999999 899999999999999999999999999999999864310           1


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||+|||   +++++||||||+||++++++.+                       .++..|+
T Consensus       125 ~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  201 (293)
T cd05053         125 PEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWM  201 (293)
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCcccc
Confidence            1236888999999999999999999   9999999999999999876643                       1234699


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||.+.+..++.++|||||||++||+++ |..|
T Consensus       202 aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  234 (293)
T cd05053         202 APEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP  234 (293)
T ss_pred             CHHHhccCCcCcccceeehhhHHHHHhcCCCCC
Confidence            9999988889999999999999999997 7654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=1.7e-26  Score=188.86  Aligned_cols=144  Identities=23%  Similarity=0.375  Sum_probs=121.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.++.....   +++.  +|+.++..++||||+++++++.. ...++++||+++|+|.+++.....    .+++..+..
T Consensus        41 ~K~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~----~~~~~~~~~  113 (279)
T cd05109          41 IKVLRENTSPKANKEIL--DEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKD----RIGSQDLLN  113 (279)
T ss_pred             EEEecCCCCHHHHHHHH--HHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccC----CCCHHHHHH
Confidence            6777644333   3555  99999999999999999999975 457799999999999999976432    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +++++||||||+||++++++.+                       .+++.|++||...+..++.
T Consensus       114 ~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  190 (279)
T cd05109         114 WCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTH  190 (279)
T ss_pred             HHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCc
Confidence            9999999999999   9999999999999999875533                       1235699999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|||||||++|||++ |..|
T Consensus       191 ~~Di~slG~~l~el~t~g~~p  211 (279)
T cd05109         191 QSDVWSYGVTVWELMTFGAKP  211 (279)
T ss_pred             hhHHHHHHHHHHHHHcCCCCC
Confidence            9999999999999998 7665

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.94  E-value=5.7e-27  Score=188.87  Aligned_cols=144  Identities=28%  Similarity=0.389  Sum_probs=124.8

Q ss_pred             eEEEcCCCC-------cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLN-------TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~-------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      +|.+.....       .+.+.  +|+.++++++||||+++++++..+...++++||+++++|.+++....     ++++.
T Consensus        30 ik~~~~~~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~  102 (258)
T cd06632          30 VKEVSLADDGQTGQEAVKQLE--QEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYG-----SFPEP  102 (258)
T ss_pred             EEEEEEccccccchHHHHHHH--HHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcC-----CCCHH
Confidence            777654331       13456  99999999999999999999999999999999999999999997543     57888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCC-C
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGN-C  205 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~-~  205 (227)
                      .+..++.|++.|+.|||   +.+++|+||+|+||+++.++.+                    .++..|++||.+.... +
T Consensus       103 ~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  179 (258)
T cd06632         103 VIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGY  179 (258)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCC
Confidence            99999999999999999   8999999999999999876533                    3567799999987766 8


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+||||+++|+|++|+.|
T Consensus       180 ~~~~D~~slG~~l~~l~~g~~p  201 (258)
T cd06632         180 GLAADIWSLGCTVLEMATGKPP  201 (258)
T ss_pred             CchhhhHHHHHHHHHHHhCCCC
Confidence            8999999999999999999987

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.94  E-value=1.3e-26  Score=189.67  Aligned_cols=144  Identities=22%  Similarity=0.347  Sum_probs=122.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|+.++++++|||++++++++..+...++||||+++++|..++....     .+++..+.
T Consensus        31 iK~~~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-----~~~~~~~~  103 (286)
T cd07847          31 IKKFVESEDDPVIKKIAL--REIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPR-----GVPEHLIK  103 (286)
T ss_pred             EEEEeecccCccccHHHH--HHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCC-----CCCHHHHH
Confidence            7777543222    3455  89999999999999999999999999999999999888887765433     58899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~  207 (227)
                      .++.|++.||+|||   +.+++|+||+|+||+++.++.+                     .++..|+|||.+.+ ..++.
T Consensus       104 ~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  180 (286)
T cd07847         104 KIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGP  180 (286)
T ss_pred             HHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCc
Confidence            99999999999999   8999999999999999876533                     24567999999865 45788


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|++|+.|
T Consensus       181 ~~Di~slG~i~~~l~~g~~p  200 (286)
T cd07847         181 PVDVWAIGCVFAELLTGQPL  200 (286)
T ss_pred             hhhhHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=9.8e-27  Score=192.88  Aligned_cols=144  Identities=20%  Similarity=0.274  Sum_probs=125.1

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.+++.++||||+++++.+..++..++||||+++++|.+++....     ++++..+
T Consensus        31 ik~~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~  103 (305)
T cd05609          31 MKKINKQNLILRNQIQQVF--VERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIG-----ALPVDMA  103 (305)
T ss_pred             EEEeehhhhhhHHHHHHHH--HHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcC-----CCCHHHH
Confidence            7777654321     3455  89999999999999999999999999999999999999999997643     6788889


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------------eccc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------------IGTF  192 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------------~g~~  192 (227)
                      ..++.|++.||.|||   +.+++||||+|+||++++++.+                                    .++.
T Consensus       104 ~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (305)
T cd05609         104 RMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTP  180 (305)
T ss_pred             HHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCc
Confidence            999999999999999   8999999999999999876532                                    2455


Q ss_pred             CccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       193 ~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .|+|||.+....++.++|+||||+++||+++|..|
T Consensus       181 ~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~p  215 (305)
T cd05609         181 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVP  215 (305)
T ss_pred             cccCchhccCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            79999999888899999999999999999999876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.94  E-value=1.4e-26  Score=191.01  Aligned_cols=146  Identities=22%  Similarity=0.395  Sum_probs=122.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCC------CcccC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQ------LEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~------~~~l~  144 (227)
                      +|.+......   +++.  +|+.+++.++||||+++++++..++..++||||+++++|.+++.......      ...++
T Consensus        51 ~K~~~~~~~~~~~~~~~--~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  128 (296)
T cd05095          51 VKMLREDANKNARNDFL--KEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS  128 (296)
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccC
Confidence            7777654322   4677  99999999999999999999999999999999999999999987543211      12467


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECIT  201 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~  201 (227)
                      +..+..++.|++.||+|||   +.+++|+||||+||++++++.+                       .+++.|++||...
T Consensus       129 ~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  205 (296)
T cd05095         129 YSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESIL  205 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHh
Confidence            8889999999999999999   9999999999999999865432                       1135699999888


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg  224 (227)
                      .+.++.++|+|||||++|||+++
T Consensus       206 ~~~~~~~~DiwSlG~~l~el~~~  228 (296)
T cd05095         206 LGKFTTASDVWAFGVTLWEILTL  228 (296)
T ss_pred             cCCccchhhhhHHHHHHHHHHHh
Confidence            88899999999999999999983

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=1.2e-26  Score=186.83  Aligned_cols=146  Identities=26%  Similarity=0.367  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++|||++++++.+..++..++|+||+++++|.+++....+   ..+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~  104 (256)
T cd08220          30 IKQIPVEQMTKDERLAAQ--NECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCN---SLLDEDTIL  104 (256)
T ss_pred             EEEEeccccccHHHHHHH--HHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcc---cCCCHHHHH
Confidence            7777654322    3566  999999999999999999999988999999999999999999976432   257888999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.+++.|++|||   +++++|+||+|+||++++++..                     .++..|+|||.+....++.+
T Consensus       105 ~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  181 (256)
T cd08220         105 HFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQK  181 (256)
T ss_pred             HHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcc
Confidence            99999999999999   9999999999999999754321                     35678999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||||+++|+|++|+.|
T Consensus       182 ~Dv~slG~~l~~l~~~~~~  200 (256)
T cd08220         182 SDIWALGCVLYELASLKRA  200 (256)
T ss_pred             cchHHHHHHHHHHHhCCCC
Confidence            9999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=1.5e-26  Score=186.61  Aligned_cols=146  Identities=24%  Similarity=0.371  Sum_probs=123.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC-CcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET-EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......    +.+.  +|+.++++++|||++++.+.+... ...+++|||+++++|.+++.....   .++++.++
T Consensus        30 ~k~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~---~~l~~~~~  104 (257)
T cd08223          30 IKKLNLRNASRRERKAAE--QEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKG---KLLPENQV  104 (257)
T ss_pred             EEEEehhhcCHHHHHHHH--HHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcC---CCCCHHHH
Confidence            7777644322    3455  899999999999999999987644 457899999999999999975321   25789999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.+++.|+++||   +.+++|+||+|+||+++.++.+                     .+++.|+|||...+..++.
T Consensus       105 ~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  181 (257)
T cd08223         105 VEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNY  181 (257)
T ss_pred             HHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCc
Confidence            999999999999999   9999999999999999876532                     3677899999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+|++++++++|+.|
T Consensus       182 ~~Dv~slG~il~~l~~g~~~  201 (257)
T cd08223         182 KSDVWALGCCVYEMATLKHA  201 (257)
T ss_pred             hhhhHHHHHHHHHHHcCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=1e-26  Score=188.95  Aligned_cols=133  Identities=26%  Similarity=0.437  Sum_probs=116.9

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      .+.  +|+.++++++||||+++++++...  ...++++||+++++|.+++....     .+++.....++.|++.||.||
T Consensus        50 ~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~L  122 (266)
T cd06651          50 ALE--CEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYG-----ALTESVTRKYTRQILEGMSYL  122 (266)
T ss_pred             HHH--HHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHH
Confidence            455  899999999999999999988753  56789999999999999997543     578888899999999999999


Q ss_pred             hhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCCchhhHHHHHHHH
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALL  218 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il  218 (227)
                      |   +.+++|+||+|+||++++++.+                        .++..|+|||++.+..++.++|+||+||++
T Consensus       123 H---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~  199 (266)
T cd06651         123 H---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTV  199 (266)
T ss_pred             H---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHH
Confidence            9   9999999999999999875432                        256679999999888889999999999999


Q ss_pred             HHHHhCCCC
Q 040292          219 LELLTGKKG  227 (227)
Q Consensus       219 ~el~tg~~p  227 (227)
                      ||+++|+.|
T Consensus       200 ~el~~g~~p  208 (266)
T cd06651         200 VEMLTEKPP  208 (266)
T ss_pred             HHHHHCCCC
Confidence            999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.4e-27  Score=192.46  Aligned_cols=144  Identities=24%  Similarity=0.389  Sum_probs=121.3

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEee-----CCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLE-----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||++...-..  ..-++.+|+++|+.++|+||+.+.+.+..     -+..|+|+|+|+ .+|...+++..     .++..
T Consensus        52 IKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~-----~L~d~  125 (359)
T KOG0660|consen   52 IKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQ-----DLTDD  125 (359)
T ss_pred             hhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHcCc-----cccHH
Confidence            7777633222  22234499999999999999999999866     346899999994 79999998753     58899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~  203 (227)
                      .+..++.|+++||.|+|   +.+++||||||+|++++.+..+                       +.|.+|.|||.+...
T Consensus       126 H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~  202 (359)
T KOG0660|consen  126 HAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNS  202 (359)
T ss_pred             HHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcc
Confidence            99999999999999999   9999999999999999876433                       567889999988654


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCC
Q 040292          204 -NCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       204 -~~~~~~DvwS~G~il~el~tg~~  226 (227)
                       .|+...||||.||++.||++|++
T Consensus       203 ~~Yt~aiDiWSvGCI~AEmL~gkp  226 (359)
T KOG0660|consen  203 SEYTKAIDIWSVGCILAEMLTGKP  226 (359)
T ss_pred             ccccchhhhhhhhHHHHHHHcCCC
Confidence             58999999999999999999985

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.94  E-value=2.9e-26  Score=184.44  Aligned_cols=145  Identities=26%  Similarity=0.478  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.++++++||||+++++++......++|+||+++++|.+++.....    .+++.....
T Consensus        24 ~K~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~----~~~~~~~~~   97 (251)
T cd05041          24 VKTCRSTLPPDLKRKFL--QEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKN----RLTVKKLLQ   97 (251)
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCC----CCCHHHHHH
Confidence            7777654433   3566  999999999999999999999999999999999999999999865432    578888999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.+++.||.|||   +++++||||+|+||+++.++.+                       .++..|+|||.+.+..++.
T Consensus        98 ~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  174 (251)
T cd05041          98 MSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTS  174 (251)
T ss_pred             HHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCc
Confidence            9999999999999   9999999999999999876533                       1133599999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|+||||+++|+|+| |..|
T Consensus       175 ~~Di~slG~i~~~l~t~~~~p  195 (251)
T cd05041         175 ESDVWSYGILLWETFSLGDTP  195 (251)
T ss_pred             chhHHHHHHHHHHHHhccCCC
Confidence            9999999999999999 6554

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.94  E-value=7.6e-27  Score=189.67  Aligned_cols=149  Identities=25%  Similarity=0.491  Sum_probs=123.9

Q ss_pred             eEEEcCCCC---cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC--CCcccCHHHH
Q 040292           74 ISEFGDNLN---TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS--QLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~  148 (227)
                      ||.+.....   ...+.  +|+.++++++||||+++++++...+..++||||+++++|.+++......  ....+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  108 (269)
T cd05044          31 VKTLRKGATDQEKKEFL--KEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKEL  108 (269)
T ss_pred             hhhhhcccchhhHHHHH--HHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHH
Confidence            666544332   24566  9999999999999999999999989999999999999999998643211  1124788899


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-----ce-----------------------ecccCccccccc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-----KL-----------------------IGTFGFIAPECI  200 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-----~~-----------------------~g~~~y~aPE~~  200 (227)
                      ..++.|++.||.|||   +.+++|+||+|+||++++++     .+                       .++..|+|||.+
T Consensus       109 ~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  185 (269)
T cd05044         109 LDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESL  185 (269)
T ss_pred             HHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHH
Confidence            999999999999999   89999999999999998755     21                       124569999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+..++.++||||||+++|||++ |+.|
T Consensus       186 ~~~~~~~~~Dv~slG~il~ellt~g~~p  213 (269)
T cd05044         186 LDGKFTTQSDVWSFGVLMWEILTLGQQP  213 (269)
T ss_pred             ccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence            98889999999999999999998 8765

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.94  E-value=7.5e-27  Score=191.23  Aligned_cols=144  Identities=20%  Similarity=0.335  Sum_probs=122.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    ..+.  +|+.++++++||||+++++++.+....++|+||+. ++|.+++.....    .+++..+.
T Consensus        30 ~k~~~~~~~~~~~~~~~~--~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~  102 (284)
T cd07839          30 LKRVRLDDDDEGVPSSAL--REICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNG----DIDPEIVK  102 (284)
T ss_pred             EEEeecccccccCccchh--HHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCC----CCCHHHHH
Confidence            7777644322    3455  89999999999999999999999999999999997 588887765332    68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~  207 (227)
                      .++.|+++||.|||   ..+++||||+|+||+++.++.+                     .+++.|+|||.+.+.. ++.
T Consensus       103 ~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  179 (284)
T cd07839         103 SFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST  179 (284)
T ss_pred             HHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCc
Confidence            99999999999999   9999999999999999876543                     2467799999987654 689


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+|||||++|+|+||..|
T Consensus       180 ~~DiwslG~il~~l~tg~~p  199 (284)
T cd07839         180 SIDMWSAGCIFAELANAGRP  199 (284)
T ss_pred             HHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=1.7e-26  Score=189.73  Aligned_cols=143  Identities=22%  Similarity=0.422  Sum_probs=125.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..++++||+++++|.+++...      ++++..+..+
T Consensus        49 iK~~~~~~~~~~~~~~--~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~------~~~~~~~~~~  120 (285)
T cd06648          49 VKKMDLRKQQRRELLF--NEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIATV  120 (285)
T ss_pred             EEEEeccchhHHHHHH--HHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhC------CCCHHHHHHH
Confidence            7777543332  3455  9999999999999999999999999999999999999999998762      5788899999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||+|||   +++++||||+|+||+++.++.+                     .|++.|+|||...+..++.++|
T Consensus       121 ~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  197 (285)
T cd06648         121 CLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVD  197 (285)
T ss_pred             HHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCccc
Confidence            999999999999   9999999999999999876533                     3677899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|+|++|+.|
T Consensus       198 v~slGv~l~ell~g~~p  214 (285)
T cd06648         198 IWSLGIMVIEMVDGEPP  214 (285)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.94  E-value=2e-26  Score=191.90  Aligned_cols=149  Identities=24%  Similarity=0.435  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----------C
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----------S  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----------~  138 (227)
                      +|.++.....   .++.  +|+.+++++ +||||++++++|...+..+++|||+++|+|.+++.....           .
T Consensus        49 iK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~  126 (314)
T cd05099          49 VKMLKDNATDKDLADLI--SEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKV  126 (314)
T ss_pred             EEecCCCCChHHHHHHH--HHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCC
Confidence            6766644332   3456  899999999 699999999999988899999999999999999965321           0


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||.|||   +++++||||||+|++++.++.+                       .++..|+
T Consensus       127 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  203 (314)
T cd05099         127 PEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWM  203 (314)
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCcccc
Confidence            1125788899999999999999999   9999999999999999876543                       0124599


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||.+.+..++.++|+||||+++|+|++ |..|
T Consensus       204 aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p  236 (314)
T cd05099         204 APEALFDRVYTHQSDVWSFGILMWEIFTLGGSP  236 (314)
T ss_pred             CHHHHccCCcCccchhhHHHHHHHHHHhCCCCC
Confidence            9999988889999999999999999998 6654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=7.7e-27  Score=196.61  Aligned_cols=142  Identities=23%  Similarity=0.398  Sum_probs=119.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++...      ...++++|++ +++|.+++...      .+
T Consensus        45 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~------~l  115 (343)
T cd07878          45 VKKLSRPFQSLIHARRTY--RELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQ------KL  115 (343)
T ss_pred             EEEeCchhhhhHHHHHHH--HHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhcC------CC
Confidence            7887654322    3455  899999999999999999987643      3468999988 68998887542      58


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||.|||   +++++||||||+||++++++.+                  +||+.|+|||++.+ ..
T Consensus       116 ~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  192 (343)
T cd07878         116 SDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMH  192 (343)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCcc
Confidence            89999999999999999999   9999999999999999876543                  47888999999876 46


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||+||++|+|++|+.|
T Consensus       193 ~~~~~DiwslG~il~el~~g~~p  215 (343)
T cd07878         193 YNQTVDIWSVGCIMAELLKGKAL  215 (343)
T ss_pred             CCchhhhHhHHHHHHHHHHCCCC
Confidence            88999999999999999999875

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.4e-27  Score=205.53  Aligned_cols=149  Identities=26%  Similarity=0.454  Sum_probs=128.9

Q ss_pred             eeecCCC----eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           67 GFLQDHP----ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        67 ~~~~~~~----vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      |+|..-.    ||.++.+... ++|.  +|..+|+.+.|||+|+++|+|..+..+|+|+|||..|+|.++|...+.   +
T Consensus       286 GvWKkyslTvAVKtLKEDtMeveEFL--kEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr---~  360 (1157)
T KOG4278|consen  286 GVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNR---S  360 (1157)
T ss_pred             eeeeccceeeehhhhhhcchhHHHHH--HHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhch---h
Confidence            6774433    8888877666 7899  999999999999999999999999999999999999999999987664   2


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee-------------------c---ccCcccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI-------------------G---TFGFIAPEC  199 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~-------------------g---~~~y~aPE~  199 (227)
                      .++.-..+.++.||+.|++||.   .++++||||..+|+|+.++..+.                   |   .+-|.|||.
T Consensus       361 ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEs  437 (1157)
T KOG4278|consen  361 EVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES  437 (1157)
T ss_pred             hcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCccc
Confidence            3444456778899999999999   99999999999999999875430                   1   234999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHh
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~t  223 (227)
                      +....++.|+|||+|||+|||+.|
T Consensus       438 LAyNtFSiKSDVWAFGVLLWEIAT  461 (1157)
T KOG4278|consen  438 LAYNTFSIKSDVWAFGVLLWEIAT  461 (1157)
T ss_pred             ccccccccchhhHHHHHHHHHHHh
Confidence            999999999999999999999987

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.94  E-value=2.1e-26  Score=197.85  Aligned_cols=149  Identities=22%  Similarity=0.401  Sum_probs=123.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG------------  137 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~------------  137 (227)
                      ||.++.....   +.+.  +|+.+|.++. ||||++++++|...+..++|+||+++|+|.+++.....            
T Consensus        72 vK~l~~~~~~~~~~~~~--~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~  149 (401)
T cd05107          72 VKMLKSTARSSEKQALM--SELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRD  149 (401)
T ss_pred             EEecCCCCChhHHHHHH--HHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccc
Confidence            8888755433   3455  9999999997 99999999999999999999999999999999864321            


Q ss_pred             --------------------------------------------------------------------------------
Q 040292          138 --------------------------------------------------------------------------------  137 (227)
Q Consensus       138 --------------------------------------------------------------------------------  137 (227)
                                                                                                      
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (401)
T cd05107         150 DGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTL  229 (401)
T ss_pred             cccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhh
Confidence                                                                                            


Q ss_pred             -CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccC
Q 040292          138 -SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFG  193 (227)
Q Consensus       138 -~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~  193 (227)
                       .....+++.....++.|++.||+|||   +++++||||||+||++++++.+                       .++..
T Consensus       230 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~  306 (401)
T cd05107         230 INESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLK  306 (401)
T ss_pred             hcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCc
Confidence             00113677778899999999999999   9999999999999999875422                       23456


Q ss_pred             ccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          194 FIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       194 y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |+|||.+....++.++|+||||+++|||++ |..|
T Consensus       307 y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P  341 (401)
T cd05107         307 WMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP  341 (401)
T ss_pred             eeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCC
Confidence            999999988889999999999999999998 6655

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=2.4e-26  Score=186.90  Aligned_cols=149  Identities=24%  Similarity=0.442  Sum_probs=122.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCc------ceeEeecccCCChhhhhcCCCC-CCCcc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEV------PILVFEFVACGTLADRIHDPNG-SQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~------~~lV~E~~~~gsL~~~l~~~~~-~~~~~  142 (227)
                      ||.++.....    +.+.  +|+..++.++||||+++++++.....      .++++||+++|+|.+++..... .....
T Consensus        32 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~  109 (273)
T cd05035          32 VKTMKLDIHTYSEIEEFL--SEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEK  109 (273)
T ss_pred             EEEeccCcCCHHHHHHHH--HHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCccc
Confidence            8887754332    3455  99999999999999999999876554      7899999999999998854321 12236


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccccc
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPEC  199 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~  199 (227)
                      +++.....++.|++.||.|||   +.+++||||||+||++++++.+                       .++..|+|||.
T Consensus       110 ~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~  186 (273)
T cd05035         110 LPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES  186 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhh
Confidence            888999999999999999999   8999999999999999876533                       12346999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +....++.++|||||||++|||++ |..|
T Consensus       187 ~~~~~~~~~~Dv~SlG~il~el~~~g~~p  215 (273)
T cd05035         187 LADRVYTSKSDVWAFGVTMWEIATRGQTP  215 (273)
T ss_pred             cccCCCCcccchHHHHHHHHHHHhCCCCC
Confidence            988889999999999999999999 6655

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=2.4e-26  Score=189.24  Aligned_cols=146  Identities=23%  Similarity=0.346  Sum_probs=121.7

Q ss_pred             eEEEcCCCCcccc--cchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNTEEY--YCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~~~~--~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....+.+  .+.+|+.++.+++||||+++++++...  +..++|+||+. ++|.+++.....    .+++..+.
T Consensus        35 ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~----~l~~~~~~  109 (293)
T cd07843          35 LKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQ----PFLQSEVK  109 (293)
T ss_pred             EEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccC----CCCHHHHH
Confidence            7777654433222  123899999999999999999999877  78999999997 599988875432    58899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~  207 (227)
                      .++.|++.||+|||   +.+++|+||+|+||++++++.+                     .+++.|+|||.+.+.. ++.
T Consensus       110 ~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  186 (293)
T cd07843         110 CLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYST  186 (293)
T ss_pred             HHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccc
Confidence            99999999999999   8999999999999999876533                     3566799999987554 688


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+|+++|+|++|.+|
T Consensus       187 ~~Di~slG~~l~~l~~g~~~  206 (293)
T cd07843         187 AIDMWSVGCIFAELLTKKPL  206 (293)
T ss_pred             hhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-26  Score=191.82  Aligned_cols=146  Identities=22%  Similarity=0.331  Sum_probs=126.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.+++.++||||+++++.+..+...++||||+.+++|.+++.....   ..+++..+
T Consensus        31 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~l~~~~~  105 (316)
T cd05574          31 LKVLDKKEMIKRNKVKRVL--TEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPG---KCLSEEVA  105 (316)
T ss_pred             EEEEeccccchHHHHHHHH--HHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCC---CccCHHHH
Confidence            7887654322     3455  899999999999999999999999999999999999999999875321   26888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------------------
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------------------  188 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------------------  188 (227)
                      ..++.|++.||+|||   +.+++|+||||+||+++.++.+                                        
T Consensus       106 ~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (316)
T cd05574         106 RFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFS  182 (316)
T ss_pred             HHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhc
Confidence            999999999999999   9999999999999999865421                                        


Q ss_pred             ----------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ----------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ----------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                +|+..|+|||++.+..++.++|+||||+++|+|++|+.|
T Consensus       183 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~p  231 (316)
T cd05574         183 EEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP  231 (316)
T ss_pred             ccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCC
Confidence                      356679999999888889999999999999999999976

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.94  E-value=2e-26  Score=193.98  Aligned_cols=149  Identities=20%  Similarity=0.436  Sum_probs=122.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeC-CcceeEeecccCCChhhhhcCCCCC----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLET-EVPILVFEFVACGTLADRIHDPNGS----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~----------  138 (227)
                      +|+++.....   +.+.  +|+.++.++ +||||++++++|... ...++++||+++++|.+++......          
T Consensus        42 ~K~~~~~~~~~~~~~~~--~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~  119 (337)
T cd05054          42 VKMLKEGATASEYKALM--TELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTR  119 (337)
T ss_pred             eeeccCCCCHHHHHHHH--HHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhcccccccccccccc
Confidence            8887754333   2344  899999999 899999999988754 5678999999999999988542210          


Q ss_pred             ----------------------------------------------CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEE
Q 040292          139 ----------------------------------------------QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVF  172 (227)
Q Consensus       139 ----------------------------------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H  172 (227)
                                                                    ...++++..+..++.|++.||+|||   +.+|+|
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH  196 (337)
T cd05054         120 KREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIH  196 (337)
T ss_pred             ccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence                                                          0125788999999999999999999   999999


Q ss_pred             ecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          173 RDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       173 ~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||||+||+++.++.+                       .++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus       197 rDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p  275 (337)
T cd05054         197 RDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASP  275 (337)
T ss_pred             CCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCC
Confidence            9999999999876533                       23457999999998899999999999999999998 8765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.94  E-value=1.4e-27  Score=190.77  Aligned_cols=149  Identities=23%  Similarity=0.348  Sum_probs=125.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEee-CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||+++.+...  -...+++||.+++.++||||+.+..++.. +...++++||+++ +|...++-...+....++......
T Consensus        58 iKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKs  136 (438)
T KOG0666|consen   58 IKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKS  136 (438)
T ss_pred             HHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHH
Confidence            8888877554  24456799999999999999999999887 6788999999985 999988754433333678888999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC----Cc------------------------eecccCccccccccC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN----DK------------------------LIGTFGFIAPECITT  202 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~----~~------------------------~~g~~~y~aPE~~~~  202 (227)
                      +++||+.|+.|||   ++=++||||||.||++.-+    |.                        ++-|++|.|||.+.+
T Consensus       137 ilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG  213 (438)
T KOG0666|consen  137 ILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG  213 (438)
T ss_pred             HHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcc
Confidence            9999999999999   8999999999999999766    22                        267889999999998


Q ss_pred             CC-CCchhhHHHHHHHHHHHHhCCC
Q 040292          203 GN-CNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       203 ~~-~~~~~DvwS~G~il~el~tg~~  226 (227)
                      .. |++..|+||.||++.||+|-++
T Consensus       214 a~hYT~AiDvWAiGCIfaElLtl~P  238 (438)
T KOG0666|consen  214 ARHYTKAIDVWAIGCIFAELLTLEP  238 (438)
T ss_pred             cccccchhhhHHHHHHHHHHHccCc
Confidence            86 7889999999999999998653

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.94  E-value=2.6e-26  Score=186.85  Aligned_cols=144  Identities=24%  Similarity=0.370  Sum_probs=121.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||........   +.+.  +|+.++++++||||+++++++.. +..++||||+++|+|.+++.....    .+++..+..
T Consensus        39 ik~~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~  111 (270)
T cd05056          39 VKTCKNCTSPSVREKFL--QEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKY----SLDLASLIL  111 (270)
T ss_pred             EEecCCcCCHHHHHHHH--HHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCC----CCCHHHHHH
Confidence            6776654432   4566  99999999999999999998865 567899999999999999975432    578999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.||+|||   +.+++|+||+|+||+++.++.+                      .++..|+|||.+....++.+
T Consensus       112 ~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  188 (270)
T cd05056         112 YSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSA  188 (270)
T ss_pred             HHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCch
Confidence            9999999999999   9999999999999999876533                      12346999999988888999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +|+||||+++||+++ |..|
T Consensus       189 ~Di~slG~il~el~~~g~~p  208 (270)
T cd05056         189 SDVWMFGVCMWEILMLGVKP  208 (270)
T ss_pred             hhhHHHHHHHHHHHHcCCCC
Confidence            999999999999986 8766

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=2.6e-26  Score=188.79  Aligned_cols=144  Identities=19%  Similarity=0.348  Sum_probs=122.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   ..+.  +|+.++++++||||+++++++..++..++||||++ ++|.+++.....    .+++..+..
T Consensus        35 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~  107 (291)
T cd07844          35 LKEIRLEHEEGAPFTAI--REASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYMDDCGG----GLSMHNVRL  107 (291)
T ss_pred             EEEEecccccCCchhHH--HHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCHHHHHHhCCC----CCCHHHHHH
Confidence            8887654322   2344  89999999999999999999999999999999998 599998875432    678899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~~  208 (227)
                      ++.|++.||.|||   +.+++|+||+|+||++++++.+                     .++..|+|||.+.+ ..++.+
T Consensus       108 ~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  184 (291)
T cd07844         108 FLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTS  184 (291)
T ss_pred             HHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcH
Confidence            9999999999999   9999999999999999876533                     24567999998875 447899


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|+|++|+.|
T Consensus       185 ~Dv~slG~il~~l~~g~~~  203 (291)
T cd07844         185 LDMWGVGCIFYEMATGRPL  203 (291)
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.94  E-value=1.9e-26  Score=186.03  Aligned_cols=146  Identities=28%  Similarity=0.407  Sum_probs=125.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    .++.  +|+.++++++||||+++.+++...+..++|+||+++++|.+++.....   ..+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~  104 (256)
T cd08218          30 IKEINISKMSPKEREESR--KEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRG---VLFPEDQIL  104 (256)
T ss_pred             EEEEEhHhCChHHHHHHH--HHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccC---CCCCHHHHH
Confidence            7777643221    3566  999999999999999999999999999999999999999998875321   146788899


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.|++.|+.|||   +.+++|+||+|+|++++.++.+                     .|++.|+|||+..+...+.+
T Consensus       105 ~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~  181 (256)
T cd08218         105 DWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNK  181 (256)
T ss_pred             HHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCc
Confidence            99999999999999   8999999999999999875533                     36678999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||||++++++++|+.|
T Consensus       182 ~Dv~slG~i~~~l~~g~~~  200 (256)
T cd08218         182 SDIWALGCVLYEMCTLKHA  200 (256)
T ss_pred             cchhHHHHHHHHHHcCCCC
Confidence            9999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=5.4e-27  Score=208.29  Aligned_cols=165  Identities=21%  Similarity=0.263  Sum_probs=130.1

Q ss_pred             HhhcCCCCCC-eeecC--CC--eEEEcCCCCc--ccccchhHHHHHhcC-CCcccceeEEEEe-e---C---CcceeEee
Q 040292           57 GATNNYDPGK-GFLQD--HP--ISEFGDNLNT--EEYYCFNCIAFASQM-SHKNILKFVGCCL-E---T---EVPILVFE  121 (227)
Q Consensus        57 ~~~~~f~~~~-~~~~~--~~--vK~~~~~~~~--~~~~~~~Ei~~l~~l-~H~niv~l~g~~~-~---~---~~~~lV~E  121 (227)
                      -|.++|+.++ +...+  ..  +|++-.....  +...  +||.+|++| .|||||.+++... .   .   -+++|.||
T Consensus        45 LAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~--~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmE  122 (738)
T KOG1989|consen   45 LAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVK--REIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLME  122 (738)
T ss_pred             EccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHH--HHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehh
Confidence            3566777766 33322  22  7777655333  3445  999999999 5999999999432 1   1   25679999


Q ss_pred             cccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------
Q 040292          122 FVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------  188 (227)
Q Consensus       122 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------  188 (227)
                      ||.||+|-|+++.+...   .|++.+++.|+.|+++|+.+||.. ..+|+|||||-+|+|++.++..             
T Consensus       123 yC~gg~Lvd~mn~Rlq~---~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~  198 (738)
T KOG1989|consen  123 YCKGGSLVDFMNTRLQT---RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKIL  198 (738)
T ss_pred             hccCCcHHHHHHHHHhc---cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccC
Confidence            99999999999865431   489999999999999999999954 6679999999999999988743             


Q ss_pred             -----------------ecccCcccccccc---CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -----------------IGTFGFIAPECIT---TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -----------------~g~~~y~aPE~~~---~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                       ..|+.|+|||.+.   +...+.|+|||+|||+||-|+....|
T Consensus       199 ~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~P  257 (738)
T KOG1989|consen  199 SPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTP  257 (738)
T ss_pred             CCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCC
Confidence                             3678899999884   44689999999999999999988766

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.94  E-value=1.5e-26  Score=189.23  Aligned_cols=149  Identities=23%  Similarity=0.431  Sum_probs=123.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEee-CCcceeEeecccCCChhhhhcCCCCC---CCcccCHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGS---QLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~---~~~~l~~~  146 (227)
                      +|.+......   +.+.  +|+.++++++||||+++++++.. +...++++||+++++|.+++......   ....+++.
T Consensus        40 ~k~~~~~~~~~~~~~~~--~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~  117 (280)
T cd05043          40 VKTVKDHASEIQVTLLL--QESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQ  117 (280)
T ss_pred             EEEccCCCCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHH
Confidence            7776644333   3455  99999999999999999999876 46788999999999999998654221   11268899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~  203 (227)
                      .+..++.|++.||+|||   +++++|+||+|+|+++++++.+                       .++..|+|||++...
T Consensus       118 ~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~  194 (280)
T cd05043         118 QLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNK  194 (280)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcC
Confidence            99999999999999999   9999999999999999875532                       134469999999888


Q ss_pred             CCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          204 NCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++.++||||||+++||+++ |+.|
T Consensus       195 ~~~~~~Di~slG~~l~el~~~g~~p  219 (280)
T cd05043         195 EYSSASDVWSFGVLLWELMTLGQTP  219 (280)
T ss_pred             CCCchhhHHHhHHHHHHHhcCCCCC
Confidence            89999999999999999998 8776

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.94  E-value=2.3e-26  Score=186.30  Aligned_cols=145  Identities=24%  Similarity=0.397  Sum_probs=122.5

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +.+.  +|+.++++++|+||+++.+.+.. ...+++|||+++++|.+++.....   ..+++..+..++
T Consensus        35 iK~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~  108 (260)
T cd05073          35 VKTMKPGSMSVEAFL--AEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFS  108 (260)
T ss_pred             EEecCCChhHHHHHH--HHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCc---cccCHHHHHHHH
Confidence            7766644332 5677  99999999999999999999877 778999999999999999976432   256788899999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++|+||+|+|++++.++.+                      .++..|+|||.+....++.++|
T Consensus       109 ~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  185 (260)
T cd05073         109 AQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD  185 (260)
T ss_pred             HHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCcccc
Confidence            99999999999   8999999999999999876543                      1234599999998888899999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||||+++|+++| |+.|
T Consensus       186 i~slG~~l~~l~t~g~~p  203 (260)
T cd05073         186 VWSFGILLMEIVTYGRIP  203 (260)
T ss_pred             chHHHHHHHHHHhcCCCC
Confidence            9999999999999 7765

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.94  E-value=2.3e-26  Score=188.97  Aligned_cols=149  Identities=24%  Similarity=0.450  Sum_probs=123.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-------------  137 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-------------  137 (227)
                      +|.+......   +++.  +|+.++++++||||+++++++..++..++|+||+++|+|.+++.....             
T Consensus        40 iK~~~~~~~~~~~~~~~--~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  117 (288)
T cd05050          40 VKMLKEEASADMQADFQ--REAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSA  117 (288)
T ss_pred             EEecCCCcCHHHHHHHH--HHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccc
Confidence            7777654332   4566  999999999999999999999999999999999999999999864221             


Q ss_pred             ----CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ec
Q 040292          138 ----SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IG  190 (227)
Q Consensus       138 ----~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g  190 (227)
                          .....+++..+..++.|++.||+|||   +++++||||+|+|+++++++.+                       .+
T Consensus       118 ~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  194 (288)
T cd05050         118 RKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAI  194 (288)
T ss_pred             ccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhheEecCCCceEECccccceecccCccccccCCCcc
Confidence                01124778889999999999999999   9999999999999999876533                       12


Q ss_pred             ccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       191 ~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +..|+|||...+..++.++|+|||||++|||++ |..|
T Consensus       195 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p  232 (288)
T cd05050         195 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP  232 (288)
T ss_pred             ChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence            345999999988889999999999999999997 6544

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.94  E-value=2.5e-26  Score=192.85  Aligned_cols=149  Identities=23%  Similarity=0.425  Sum_probs=123.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----------C
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----------S  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----------~  138 (227)
                      +|.++.....   +++.  +|+.+++++ +||||++++++|..++..++++||+++|+|.+++.....           .
T Consensus        49 iK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  126 (334)
T cd05100          49 VKMLKDDATDKDLSDLV--SEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKL  126 (334)
T ss_pred             EEEcccccCHHHHHHHH--HHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccC
Confidence            6766543322   3566  999999999 899999999999999999999999999999999875321           0


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||+|||   +++++||||||+||+++.++.+                       .++..|+
T Consensus       127 ~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  203 (334)
T cd05100         127 PEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWM  203 (334)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEc
Confidence            1125788889999999999999999   9999999999999999876532                       1234599


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||.+....++.++|+||||+++|||++ |..|
T Consensus       204 aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  236 (334)
T cd05100         204 APEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP  236 (334)
T ss_pred             CHHHhccCCcCchhhhHHHHHHHHHHHhcCCCC
Confidence            9999988889999999999999999998 6654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.94  E-value=2.5e-26  Score=190.31  Aligned_cols=144  Identities=26%  Similarity=0.458  Sum_probs=120.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   .++.  +|+.++++++||||++++|+|... ..++++||+++|+|.+++.....    .+++..+..
T Consensus        41 iK~~~~~~~~~~~~~~~--~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~----~~~~~~~~~  113 (303)
T cd05110          41 IKILNETTGPKANVEFM--DEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKD----NIGSQLLLN  113 (303)
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhccc----CCCHHHHHH
Confidence            5666544332   2455  999999999999999999998754 46799999999999999876432    578889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +++++|+||||+||++++++.+                       .++..|+|||.+.+..++.
T Consensus       114 ~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  190 (303)
T cd05110         114 WCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTH  190 (303)
T ss_pred             HHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCCh
Confidence            9999999999999   9999999999999999875432                       1345799999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++||||||+++||+++ |+.|
T Consensus       191 ~~DiwslG~~l~el~t~g~~p  211 (303)
T cd05110         191 QSDVWSYGVTIWELMTFGGKP  211 (303)
T ss_pred             HHHHHHHHHHHHHHHhCCCCC
Confidence            9999999999999997 7665

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=1.5e-26  Score=189.40  Aligned_cols=144  Identities=20%  Similarity=0.316  Sum_probs=124.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++..++..++|+||+ +++|.+++....    .++++..+.
T Consensus        30 vK~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~----~~~~~~~~~  102 (286)
T cd07832          30 LKKVALRRLEGGIPNQAL--REIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEE----RPLPEAQVK  102 (286)
T ss_pred             EEEEEcccccchhhHHHH--HHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcC----CCCCHHHHH
Confidence            7887654422    4566  9999999999999999999999999999999999 999999986543    268899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCC-CC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGN-CN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~-~~  206 (227)
                      .++.|++.||+|||   +.+++|+||+|+||++++++.+                      .++..|+|||.+.+.. ++
T Consensus       103 ~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  179 (286)
T cd07832         103 SYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYD  179 (286)
T ss_pred             HHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCC
Confidence            99999999999999   8999999999999999875432                      3567899999986544 68


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+|+++++|++|.+|
T Consensus       180 ~~~Di~slG~~l~~l~tg~~~  200 (286)
T cd07832         180 PGVDLWAVGCIFAELLNGSPL  200 (286)
T ss_pred             chhHHHHHHHHHHHHHcCCcC
Confidence            999999999999999999654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.94  E-value=1.3e-26  Score=185.58  Aligned_cols=141  Identities=24%  Similarity=0.261  Sum_probs=120.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      +|.+....   .+.  +|...+....||||+++++++...+..++||||+++|+|.+++....     ++++..+..++.
T Consensus        23 ~K~i~~~~---~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~   92 (237)
T cd05576          23 LKGLRKSS---EYS--RERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL-----NIPEECVKRWAA   92 (237)
T ss_pred             EEeecchh---hhh--hHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc-----CCCHHHHHHHHH
Confidence            77775542   233  66666666789999999999999999999999999999999987543     588999999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhhHHHHH
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSDVYSFG  215 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G  215 (227)
                      |++.||+|||   +++++||||||+|++++.++.+                  .++..|+|||......++.++|+||+|
T Consensus        93 ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  169 (237)
T cd05576          93 EMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLG  169 (237)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHH
Confidence            9999999999   9999999999999999987643                  234569999999888889999999999


Q ss_pred             HHHHHHHhCCCC
Q 040292          216 ALLLELLTGKKG  227 (227)
Q Consensus       216 ~il~el~tg~~p  227 (227)
                      +++|||++|..|
T Consensus       170 ~il~el~~g~~~  181 (237)
T cd05576         170 AILFELLTGKTL  181 (237)
T ss_pred             HHHHHHHHCcch
Confidence            999999999754

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=1.4e-26  Score=190.47  Aligned_cols=148  Identities=20%  Similarity=0.279  Sum_probs=120.2

Q ss_pred             eEEEcCCCC-cccccchhHHHHHhcC-CCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLN-TEEYYCFNCIAFASQM-SHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~-~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      +|.+..... ...+.  +|+.++.++ +|||++++++++...+     ..++|+||+++++|.+++....... ..+++.
T Consensus        52 ik~~~~~~~~~~~~~--~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~-~~~~~~  128 (291)
T cd06639          52 VKILDPISDVDEEIE--AEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICG-QRLDEA  128 (291)
T ss_pred             EEEecccccHHHHHH--HHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcC-CCCCHH
Confidence            666654322 24556  899999999 8999999999987543     5789999999999999886321111 267889


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC--
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG--  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~--  203 (227)
                      .+..++.|++.||.|||   +.+++|+||||+|+++++++.+                     .|+..|+|||.+...  
T Consensus       129 ~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  205 (291)
T cd06639         129 MISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ  205 (291)
T ss_pred             HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCC
Confidence            99999999999999999   9999999999999999876532                     356679999988543  


Q ss_pred             ---CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 ---NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ---~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                         .++.++|+|||||++|||++|+.|
T Consensus       206 ~~~~~~~~~Di~slGvi~~el~~g~~p  232 (291)
T cd06639         206 YDYSYDARCDVWSLGITAIELGDGDPP  232 (291)
T ss_pred             cccccCCccchHHHHHHHHHHhhCCCC
Confidence               257899999999999999999877

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.94  E-value=2.5e-26  Score=190.57  Aligned_cols=144  Identities=26%  Similarity=0.438  Sum_probs=121.6

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +++.  +|+.+++.++||||+++.++|..++..++|+||++ |++.+++....    .++++..+
T Consensus        45 iK~~~~~~~~~~~~~~~~~--~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~----~~l~~~~~  117 (307)
T cd06607          45 IKKMSYSGKQSNEKWQDII--KEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHK----KPLQEVEI  117 (307)
T ss_pred             EEEEeccccCcHHHHHHHH--HHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcc----cCCCHHHH
Confidence            7777543222     3455  99999999999999999999999999999999997 67777765432    26889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCcccccccc---CCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECIT---TGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~---~~~~~~~  208 (227)
                      ..++.|++.||.|||   +.+++|+||+|+||++++++.+                 .+++.|+|||++.   ...++.+
T Consensus       118 ~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  194 (307)
T cd06607         118 AAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGK  194 (307)
T ss_pred             HHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccccCceeeeccCCCCCCcc
Confidence            999999999999999   9999999999999999887643                 3667899999874   3457889


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||||+++|||+||++|
T Consensus       195 sDv~s~G~il~el~tg~~p  213 (307)
T cd06607         195 VDVWSLGITCIELAERKPP  213 (307)
T ss_pred             cchHHHHHHHHHHHcCCCC
Confidence            9999999999999999876

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=4.1e-26  Score=186.50  Aligned_cols=143  Identities=24%  Similarity=0.387  Sum_probs=125.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++...      ++++..+..
T Consensus        34 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~------~~~~~~~~~  105 (277)
T cd06641          34 IKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIAT  105 (277)
T ss_pred             EEEeccccchHHHHHHH--HHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcC------CCCHHHHHH
Confidence            7776543322   3566  8999999999999999999999999999999999999999988642      578899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++.|++.|+.|||   +.+++|+||+|+|+++++++.+                     .++..|+|||.+.+...+.++
T Consensus       106 ~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  182 (277)
T cd06641         106 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA  182 (277)
T ss_pred             HHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchh
Confidence            9999999999999   9999999999999999876533                     356779999999888889999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||||+++|+|++|..|
T Consensus       183 Dv~slG~~l~~l~~g~~p  200 (277)
T cd06641         183 DIWSLGITAIELAKGEPP  200 (277)
T ss_pred             hHHHHHHHHHHHHcCCCC
Confidence            999999999999999876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.94  E-value=2.6e-26  Score=185.59  Aligned_cols=144  Identities=24%  Similarity=0.374  Sum_probs=128.7

Q ss_pred             eEEEcCCCC---cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLN---TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+.....   .+.+.  +|+..+.+++|||++++++++..++..++|+||+++++|.+++....     ++++..+..
T Consensus        31 vk~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~  103 (264)
T cd06623          31 LKKIHVDGDEEFRKQLL--RELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVG-----KIPEPVLAY  103 (264)
T ss_pred             EEEeccCcchHHHHHHH--HHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcC-----CCCHHHHHH
Confidence            788776644   25677  99999999999999999999999999999999999999999997643     688999999


Q ss_pred             HHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.|++|||   + .+++|+||+|+||++++++.+                     .++..|+|||.+.+..++.+
T Consensus       104 ~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~  180 (264)
T cd06623         104 IARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYA  180 (264)
T ss_pred             HHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCch
Confidence            9999999999999   8 999999999999999876532                     35678999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||||+++|+|++|+.|
T Consensus       181 ~Dv~slG~il~~l~tg~~p  199 (264)
T cd06623         181 ADIWSLGLTLLECALGKFP  199 (264)
T ss_pred             hhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999877

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.94  E-value=2.2e-26  Score=188.66  Aligned_cols=144  Identities=21%  Similarity=0.334  Sum_probs=119.2

Q ss_pred             eEEEcCCCCc-----ccccchhHHHH---HhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAF---ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~---l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......     ..+.  +|..+   +...+||||+.+++.+..++..++||||+++++|.+++....     .+++
T Consensus        24 iK~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-----~l~~   96 (279)
T cd05633          24 MKCLDKKRIKMKQGETLAL--NERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHG-----VFSE   96 (279)
T ss_pred             EEEEEccccccchHHHHHH--HHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcC-----CCCH
Confidence            7777544322     1222  44433   344589999999999999999999999999999999887543     6899


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccC-CCC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITT-GNC  205 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~-~~~  205 (227)
                      ..+..++.|++.||.|||   +.+++|+||||+||++++++.+                   .|+..|+|||.+.. ..+
T Consensus        97 ~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  173 (279)
T cd05633          97 KEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAY  173 (279)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCC
Confidence            999999999999999999   9999999999999999876532                   47889999999864 457


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+||+||++|+|++|..|
T Consensus       174 ~~~~Di~slG~~l~~l~~g~~p  195 (279)
T cd05633         174 DSSADWFSLGCMLFKLLRGHSP  195 (279)
T ss_pred             CchhhhHHHHHHHHHHHhCCCC
Confidence            8999999999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.5e-26  Score=187.45  Aligned_cols=143  Identities=25%  Similarity=0.408  Sum_probs=123.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCC---CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMS---HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++.....   +++.  +|+.++++++   |||++++++++..+...++||||+++++|.+++...      ++++..
T Consensus        31 iK~~~~~~~~~~~~~~~--~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~l~~~~  102 (277)
T cd06917          31 LKIINLDTPDDDVSDIQ--REVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG------PIAEKY  102 (277)
T ss_pred             EEEecCCCCchhHHHHH--HHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc------CCCHHH
Confidence            7877654332   3566  8999999996   999999999999999999999999999999988642      578899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NC  205 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~  205 (227)
                      ...++.|++.||.|||   +.+++|+||+|+||++++++.+                     .|+..|+|||.+.++ .+
T Consensus       103 ~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  179 (277)
T cd06917         103 ISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY  179 (277)
T ss_pred             HHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCcc
Confidence            9999999999999999   9999999999999999976543                     366679999988654 46


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+||||+++|+|++|..|
T Consensus       180 ~~~~Dv~slG~~l~~ll~g~~p  201 (277)
T cd06917         180 DTKADIWSLGITIYEMATGNPP  201 (277)
T ss_pred             ccchhHHHHHHHHHHHHhCCCC
Confidence            8899999999999999999987

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.94  E-value=4e-26  Score=187.66  Aligned_cols=149  Identities=21%  Similarity=0.408  Sum_probs=122.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----CCCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----SQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----~~~~~l~~  145 (227)
                      +|.+......   ..+.  +|+.++++++||||+++++++...+..++||||+++|+|.+++.....     .......+
T Consensus        41 vK~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  118 (288)
T cd05061          41 VKTVNESASLRERIEFL--NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL  118 (288)
T ss_pred             EEECCCcCCHHHHHHHH--HHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCH
Confidence            6766544322   2455  899999999999999999999999999999999999999999964321     01124566


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..+..++.|++.||.|||   +++++||||||+||++++++.+                       .++..|+|||.+.+
T Consensus       119 ~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  195 (288)
T cd05061         119 QEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (288)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc
Confidence            778899999999999999   9999999999999999876543                       12456999999988


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..++.++|+|||||++|||++ |..|
T Consensus       196 ~~~~~~~DvwslG~~l~el~~~~~~p  221 (288)
T cd05061         196 GVFTTSSDMWSFGVVLWEITSLAEQP  221 (288)
T ss_pred             CCCChHhHHHHHHHHHHHHHhCCCCC
Confidence            889999999999999999998 5554

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.94  E-value=1.4e-26  Score=189.84  Aligned_cols=148  Identities=22%  Similarity=0.284  Sum_probs=120.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEEEee-----CCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGCCLE-----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      +|.+...... .++.  +|+.+++++ +||||+++++++..     ++..++||||+++++|.+++....... ..+++.
T Consensus        48 ik~~~~~~~~~~~~~--~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~  124 (286)
T cd06638          48 VKILDPIHDIDEEIE--AEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRG-ERMEEP  124 (286)
T ss_pred             EEeeccccchHHHHH--HHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccC-ccccHH
Confidence            6666543222 4566  899999999 79999999998853     346899999999999999875321111 257888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC---
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT---  202 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~---  202 (227)
                      .+..++.|++.||.|||   +.+++||||||+||++++++.+                     .|++.|+|||++..   
T Consensus       125 ~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (286)
T cd06638         125 IIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ  201 (286)
T ss_pred             HHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhh
Confidence            89999999999999999   9999999999999999876532                     36778999998753   


Q ss_pred             --CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 --GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 --~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        ..++.++|+||+||++|||++|+.|
T Consensus       202 ~~~~~~~~~Dv~slGvi~~el~~g~~p  228 (286)
T cd06638         202 LDSTYDARCDVWSLGITAIELGDGDPP  228 (286)
T ss_pred             ccccccchhhhhhHHHHHHHHhcCCCC
Confidence              3478899999999999999999876

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2e-26  Score=189.02  Aligned_cols=148  Identities=22%  Similarity=0.383  Sum_probs=123.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   ..+.  +|+.++.+++||||+++++.+...+..++||||+++++|..++.....  ...+++..+..
T Consensus        31 ~k~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~  106 (286)
T cd06622          31 MKEIRLELDESKFNQII--MELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVA--TEGIPEDVLRR  106 (286)
T ss_pred             EEEeecccCHHHHHHHH--HHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccc--cCCCCHHHHHH
Confidence            7777644332   3566  999999999999999999999999999999999999999988875311  12688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCC------C
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGN------C  205 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~------~  205 (227)
                      ++.|++.||.|||.  ..+++|+||+|+||+++.++.+                   .+++.|+|||.+....      +
T Consensus       107 ~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  184 (286)
T cd06622         107 ITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTY  184 (286)
T ss_pred             HHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCC
Confidence            99999999999993  3589999999999999876533                   3566899999985443      4


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+|||||++|+|++|+.|
T Consensus       185 ~~~~DiwslG~il~~l~~g~~p  206 (286)
T cd06622         185 TVQSDVWSLGLSILEMALGRYP  206 (286)
T ss_pred             CcccchHhHHHHHHHHHhCCCC
Confidence            7899999999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.94  E-value=2.4e-26  Score=188.57  Aligned_cols=145  Identities=21%  Similarity=0.331  Sum_probs=118.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC---CCcccceeEEEEeeC-----CcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM---SHKNILKFVGCCLET-----EVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      +|.++.....    ..+.  +|+.+++++   +||||+++++++...     ...++|+||++ ++|.+++.....   .
T Consensus        30 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~  103 (288)
T cd07863          30 LKSVRVQTNEDGLPLSTV--REVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVD-QDLRTYLDKVPP---P  103 (288)
T ss_pred             EEEeccCcCCCCCchHHH--HHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccc-cCHHHHHHhcCC---C
Confidence            7777654322    2334  787777665   799999999988642     34789999997 589888865321   2


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~  201 (227)
                      .+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                    .++..|+|||++.
T Consensus       104 ~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (288)
T cd07863         104 GLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLL  180 (288)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCccccccccCchHhh
Confidence            5789999999999999999999   9999999999999999876543                    3577899999998


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++|+||+||++|+|++|++|
T Consensus       181 ~~~~~~~~DiwslG~~l~~l~~g~~~  206 (288)
T cd07863         181 QSTYATPVDMWSVGCIFAEMFRRKPL  206 (288)
T ss_pred             CCCCCCcchhhhHHHHHHHHHhCCcC
Confidence            88899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PTZ00284 protein kinase; Provisional

Probab=99.94  E-value=1.6e-26  Score=202.54  Aligned_cols=143  Identities=20%  Similarity=0.291  Sum_probs=117.4

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCc------ccceeEEEEeeC-CcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHK------NILKFVGCCLET-EVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~------niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.++..... .++.  .|+.++..++|.      +++.+++++..+ ...|+|||++ +++|.+++....     ++++
T Consensus       159 vK~i~~~~~~~~~~~--~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~-----~l~~  230 (467)
T PTZ00284        159 VKIVRNVPKYTRDAK--IEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHG-----PFSH  230 (467)
T ss_pred             EEEEecchhhHHHHH--HHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcC-----CCCH
Confidence            8887643222 3445  677777776554      588888888764 4678999988 678999887543     6889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCc----------------------------------eec
Q 040292          146 KHRLKVAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDK----------------------------------LIG  190 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~----------------------------------~~g  190 (227)
                      ..+..++.|++.||+|||   . .+|+||||||+||+++.++.                                  .+|
T Consensus       231 ~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~g  307 (467)
T PTZ00284        231 RHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVS  307 (467)
T ss_pred             HHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccccccccC
Confidence            999999999999999999   7 59999999999999975431                                  257


Q ss_pred             ccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       191 ~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       308 t~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~p  344 (467)
T PTZ00284        308 TRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLL  344 (467)
T ss_pred             CccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            8899999999998999999999999999999999986

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.94  E-value=6.7e-27  Score=188.51  Aligned_cols=146  Identities=28%  Similarity=0.415  Sum_probs=125.4

Q ss_pred             eEEEcCCC----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNL----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+....    ..+.+.  +|+.++++++||||+++++.+...+..++|+||+++++|.+++.....   ..+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~  104 (257)
T cd08225          30 IKEIDLTKMPVKEKEASK--KEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRG---VLFSEDQIL  104 (257)
T ss_pred             EEEeeHhhccchhhHHHH--HHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccC---CCCCHHHHH
Confidence            67765432    123555  999999999999999999999999999999999999999999875432   147889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++..                      .|++.|+|||+.....++.
T Consensus       105 ~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~  181 (257)
T cd08225         105 SWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNN  181 (257)
T ss_pred             HHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCc
Confidence            99999999999999   8999999999999999876421                      3667799999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|++++|..|
T Consensus       182 ~~Dv~slG~il~~l~~g~~p  201 (257)
T cd08225         182 KTDIWSLGCVLYELCTLKHP  201 (257)
T ss_pred             hhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=1.7e-26  Score=190.51  Aligned_cols=146  Identities=23%  Similarity=0.268  Sum_probs=122.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     ....+.+|+.++++++|+||+++++++...+..++||||+ +++|.+++....    ..+++..+
T Consensus        30 iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~----~~~~~~~~  104 (298)
T cd07841          30 IKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKS----IVLTPADI  104 (298)
T ss_pred             EEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccC----CCCCHHHH
Confidence            8888755432     1122238999999999999999999999988999999999 899999997643    15889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCN  206 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~  206 (227)
                      ..++.|+++||.|||   +++++|+||+|+||+++.++.+                     .+++.|+|||.+.+ ..++
T Consensus       105 ~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  181 (298)
T cd07841         105 KSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYG  181 (298)
T ss_pred             HHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCC
Confidence            999999999999999   9999999999999999876643                     23456999998854 3578


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|+|++|.+|
T Consensus       182 ~~~Dv~slG~il~e~~~g~~~  202 (298)
T cd07841         182 VGVDMWSVGCIFAELLLRVPF  202 (298)
T ss_pred             cHHHHHHHHHHHHHHHcCCcc
Confidence            999999999999999999653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=2.6e-26  Score=187.67  Aligned_cols=146  Identities=22%  Similarity=0.326  Sum_probs=125.5

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+.....     .+.+.  +|+.++++++||||+++++.+...+..|+|+||+++++|.+++.....   ..+++..+
T Consensus        23 ik~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~   97 (277)
T cd05577          23 CKKLDKKRLKKRKGEQMAL--NEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGE---PGFPEARA   97 (277)
T ss_pred             EEEEehhhhhhhhhhHHHH--HHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCc---CCCCHHHH
Confidence            677654321     13345  899999999999999999999999999999999999999999875432   25788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||.|||   +.+++|+||+|+||++++++.+                    .++..|++||.+.+..++.+
T Consensus        98 ~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  174 (277)
T cd05577          98 IFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFS  174 (277)
T ss_pred             HHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCch
Confidence            999999999999999   9999999999999999876543                    35567999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++++|++|+.|
T Consensus       175 ~Di~slG~il~~l~~g~~p  193 (277)
T cd05577         175 VDWFALGCTLYEMIAGRSP  193 (277)
T ss_pred             hhhHHHHHHHHHHhhCCCC
Confidence            9999999999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-26  Score=187.19  Aligned_cols=148  Identities=26%  Similarity=0.366  Sum_probs=122.2

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      +|.+...... +.+.  +|+.+++++ +||||+++++++....      ..++||||+++++|.+++...... ...+++
T Consensus        36 ~k~~~~~~~~~~~~~--~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~  112 (275)
T cd06608          36 IKIMDIIEDEEEEIK--EEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKK-GKRLKE  112 (275)
T ss_pred             EEEEecCchhHHHHH--HHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhc-CCCCCH
Confidence            7776654433 5677  999999999 7999999999997654      379999999999999988643210 126889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC--
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT--  202 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~--  202 (227)
                      ..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+                     .++..|+|||.+..  
T Consensus       113 ~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  189 (275)
T cd06608         113 EWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDE  189 (275)
T ss_pred             HHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccccCHhHhcccc
Confidence            999999999999999999   9999999999999999876533                     36677999998753  


Q ss_pred             ---CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 ---GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ---~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                         ..++.++|+||||+++|+|++|+.|
T Consensus       190 ~~~~~~~~~~Dv~slG~il~~l~~g~~p  217 (275)
T cd06608         190 QPDASYDARSDVWSLGITAIELADGKPP  217 (275)
T ss_pred             cccCCccccccHHHhHHHHHHHHhCCCC
Confidence               2367889999999999999999987

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.94  E-value=3.9e-26  Score=185.99  Aligned_cols=121  Identities=24%  Similarity=0.369  Sum_probs=111.3

Q ss_pred             CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCC
Q 040292           99 SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPF  178 (227)
Q Consensus        99 ~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~  178 (227)
                      +||||+++++.+...+..++||||+++++|.+++....     ++++..+..++.|++.||.|||   +.+++||||+|+
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~  138 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG-----KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLE  138 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHH
Confidence            79999999999999999999999999999999997653     6899999999999999999999   999999999999


Q ss_pred             ceeecCCC-ce-----------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          179 TTHVNDND-KL-----------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       179 nil~~~~~-~~-----------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |++++.++ .+                 .++..|+|||++....++.++|+||+|+++|+|++|+.|
T Consensus       139 nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p  205 (267)
T PHA03390        139 NVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHP  205 (267)
T ss_pred             HEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            99998876 32                 367789999999888899999999999999999999877

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.94  E-value=3.4e-26  Score=188.78  Aligned_cols=143  Identities=21%  Similarity=0.404  Sum_probs=124.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  ..+.  +|+.++++++|+|++++++.+...+..++||||+++++|.+++...      .+++.....+
T Consensus        50 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~  121 (292)
T cd06657          50 VKKMDLRKQQRRELLF--NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAV  121 (292)
T ss_pred             EEEecccchhHHHHHH--HHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcC------CCCHHHHHHH
Confidence            7776543322  3455  9999999999999999999999999999999999999999987542      5788889999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.|++|||   +.+++|+||+|+||++++++.+                     .+++.|++||.+.+..++.++|
T Consensus       122 ~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  198 (292)
T cd06657         122 CLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD  198 (292)
T ss_pred             HHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhh
Confidence            999999999999   8999999999999999876532                     3667899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||+|+++|+|++|..|
T Consensus       199 v~slGvil~el~tg~~p  215 (292)
T cd06657         199 IWSLGIMVIEMVDGEPP  215 (292)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=2.8e-26  Score=202.37  Aligned_cols=136  Identities=24%  Similarity=0.311  Sum_probs=114.8

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.+|++++||||+++++++...+..|+|+|++. ++|.+++...............+..++.|++.||.||| 
T Consensus       209 ~~~--~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH-  284 (501)
T PHA03210        209 QLE--NEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH-  284 (501)
T ss_pred             HHH--HHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH-
Confidence            455  99999999999999999999999999999999985 67877775432211112335567789999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELL  222 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~  222 (227)
                        +++|+||||||+||+++.++.+                      +||..|+|||++.+..++.++|||||||++|||+
T Consensus       285 --~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  362 (501)
T PHA03210        285 --DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDML  362 (501)
T ss_pred             --hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHH
Confidence              9999999999999999876432                      5888999999999888999999999999999999


Q ss_pred             hCCC
Q 040292          223 TGKK  226 (227)
Q Consensus       223 tg~~  226 (227)
                      +|..
T Consensus       363 ~~~~  366 (501)
T PHA03210        363 SHDF  366 (501)
T ss_pred             HCCC
Confidence            9863

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.94  E-value=3.1e-26  Score=188.96  Aligned_cols=143  Identities=25%  Similarity=0.394  Sum_probs=124.7

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++.+..++..++|+||+++++|.+++...      .+++..+..+
T Consensus        49 iK~~~~~~~~~~~~~~--~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~l~~~~~~~i  120 (293)
T cd06647          49 IKQMNLQQQPKKELII--NEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAV  120 (293)
T ss_pred             EEEeccccchHHHHHH--HHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhc------CCCHHHHHHH
Confidence            7777543333  4556  9999999999999999999999999999999999999999998653      4678889999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||.|||   +++++|+||+|+|++++.++.+                     .+++.|++||.+....++.++|
T Consensus       121 ~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  197 (293)
T cd06647         121 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD  197 (293)
T ss_pred             HHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhh
Confidence            999999999999   9999999999999999875432                     3566799999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|++++|+.|
T Consensus       198 v~slG~ll~~ll~g~~p  214 (293)
T cd06647         198 IWSLGIMAIEMVEGEPP  214 (293)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=7.2e-26  Score=186.23  Aligned_cols=146  Identities=18%  Similarity=0.332  Sum_probs=120.4

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... ..+.+.+|+.++++++|+||+++++++..++..++|+||+. +++.+++.....    .+++..+..++
T Consensus        35 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~  109 (291)
T cd07870          35 LKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPG----GLHPYNVRLFM  109 (291)
T ss_pred             EEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCC----CCCHHHHHHHH
Confidence            8887654333 22222389999999999999999999999889999999996 677777654321    56778888999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~~~D  210 (227)
                      .|++.||.|||   +.+++|+||||+||+++.++.+                     .+++.|+|||.+.+. .++.++|
T Consensus       110 ~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  186 (291)
T cd07870         110 FQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALD  186 (291)
T ss_pred             HHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHH
Confidence            99999999999   8999999999999999876533                     256779999998754 4788999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++|+|++|..|
T Consensus       187 v~slG~~l~~l~~g~~~  203 (291)
T cd07870         187 IWGAGCIFIEMLQGQPA  203 (291)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.94  E-value=7.2e-26  Score=188.81  Aligned_cols=144  Identities=26%  Similarity=0.442  Sum_probs=121.8

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     ..+.  +|+.++++++|||++++++++..++..++||||++ |+|.+.+.....    ++++..+
T Consensus        55 lK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~----~l~~~~~  127 (317)
T cd06635          55 IKKMSYSGKQSNEKWQDII--KEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKK----PLQEVEI  127 (317)
T ss_pred             EEEEecCCCCchHHHHHHH--HHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcC----CCCHHHH
Confidence            7777643222     2455  89999999999999999999999999999999997 588777754332    6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCcccccccc---CCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECIT---TGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~---~~~~~~~  208 (227)
                      ..++.|++.|+.|||   +++++|+||+|+||+++.++.+                 .+++.|+|||.+.   ...++.+
T Consensus       128 ~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  204 (317)
T cd06635         128 AAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGK  204 (317)
T ss_pred             HHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccccChhhhhcCCCCCCCcc
Confidence            999999999999999   9999999999999999876533                 4677899999974   3457889


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+|||||++|+|++|+.|
T Consensus       205 ~Dv~slGvil~el~~g~~p  223 (317)
T cd06635         205 VDVWSLGITCIELAERKPP  223 (317)
T ss_pred             ccHHHHHHHHHHHHhCCCC
Confidence            9999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.93  E-value=8.6e-27  Score=188.35  Aligned_cols=144  Identities=24%  Similarity=0.331  Sum_probs=126.4

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+.....     .+.+.  +|+.++++++||||+++++++..+...++|+||+.+++|.+++....     ++++..+
T Consensus        30 ik~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~  102 (258)
T cd05578          30 MKYMNKQKCVEKGSVRNVL--NERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV-----KFSEEQV  102 (258)
T ss_pred             EEEEehhhhcchhHHHHHH--HHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcC-----CcCHHHH
Confidence            777764321     14556  99999999999999999999999999999999999999999997652     6888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||.|||   +++++|+||+|+||++++++.+                    .|+..|+|||.+.+..++.+
T Consensus       103 ~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  179 (258)
T cd05578         103 KFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVA  179 (258)
T ss_pred             HHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCc
Confidence            999999999999999   8999999999999999876543                    35667999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|+|++|..|
T Consensus       180 ~Di~slG~~l~~l~~g~~p  198 (258)
T cd05578         180 VDWWSLGVTAYECLRGKRP  198 (258)
T ss_pred             ccchhhHHHHHHHHhCCCC
Confidence            9999999999999999977

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.93  E-value=3.4e-26  Score=185.23  Aligned_cols=147  Identities=24%  Similarity=0.348  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+.+++.++|+||+++++.+..++..++|+|++++++|.+++......  ..+++.....
T Consensus        31 ik~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~  106 (267)
T cd06610          31 IKRIDLEKCQTSVDELR--KEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPR--GGLDEAIIAT  106 (267)
T ss_pred             EEEeccCCcchHHHHHH--HHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhccc--CCCCHHHHHH
Confidence            7777644322   4566  9999999999999999999999999999999999999999999753211  1578899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCC-C
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTG-N  204 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~-~  204 (227)
                      ++.|++.||.|||   +.+++|+||+|+||++++++.+                         .|+..|++||.+... .
T Consensus       107 ~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~  183 (267)
T cd06610         107 VLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHG  183 (267)
T ss_pred             HHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccC
Confidence            9999999999999   9999999999999999876532                         366779999998776 6


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||||+++|+|++|+.|
T Consensus       184 ~~~~~Dv~slG~i~~~l~~g~~p  206 (267)
T cd06610         184 YDFKADIWSFGITAIELATGAAP  206 (267)
T ss_pred             cCcccchHhHhHHHHHHHhCCCC
Confidence            88999999999999999999987

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.93  E-value=4.5e-26  Score=185.53  Aligned_cols=133  Identities=24%  Similarity=0.414  Sum_probs=118.4

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.++++++|||++++++++...+..++|+||+++++|.+++....     ++++..+..++.|++.||.||| 
T Consensus        54 ~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH-  125 (272)
T cd06629          54 ALR--SEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYG-----RFEEQLVRFFTEQVLEGLAYLH-  125 (272)
T ss_pred             HHH--HHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHh-
Confidence            345  89999999999999999999999999999999999999999997653     6888889999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCC--CCchhhHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGN--CNEKSDVYSFGALLL  219 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~--~~~~~DvwS~G~il~  219 (227)
                        +.+++|+||+|+||++++++.+                       .++..|+|||.+....  ++.++|+||+|+++|
T Consensus       126 --~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~  203 (272)
T cd06629         126 --SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL  203 (272)
T ss_pred             --hCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence              8999999999999999865532                       3566799999987654  788999999999999


Q ss_pred             HHHhCCCC
Q 040292          220 ELLTGKKG  227 (227)
Q Consensus       220 el~tg~~p  227 (227)
                      ++++|..|
T Consensus       204 ~l~~g~~p  211 (272)
T cd06629         204 EMFAGRRP  211 (272)
T ss_pred             HHHhCCCC
Confidence            99999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=4.7e-26  Score=187.17  Aligned_cols=148  Identities=24%  Similarity=0.339  Sum_probs=123.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......   ..+.  +|++++++++||||++++++|...  +..++||||+++++|.+++..... ....+++...
T Consensus        31 ~k~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~l~~~~~  107 (287)
T cd06621          31 LKTITTDPNPDLQKQIL--RELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKK-RGGRIGEKVL  107 (287)
T ss_pred             EEEEecCCchHHHHHHH--HHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHh-cCCCCCHHHH
Confidence            7776644332   4566  999999999999999999998654  367999999999999987653211 1125788889


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ..++.|++.||.|||   +.+++|+||+|+|+++++++.+                   .++..|+|||.+.+..++.++
T Consensus       108 ~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~  184 (287)
T cd06621         108 GKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITS  184 (287)
T ss_pred             HHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchh
Confidence            999999999999999   9999999999999999876533                   356679999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||+|+++|+|++|+.|
T Consensus       185 Dv~slG~il~~l~~g~~p  202 (287)
T cd06621         185 DVWSLGLTLLEVAQNRFP  202 (287)
T ss_pred             hHHHHHHHHHHHHhCCCC
Confidence            999999999999999876

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.93  E-value=9.1e-27  Score=190.80  Aligned_cols=144  Identities=26%  Similarity=0.387  Sum_probs=122.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|+++++.++||||+++++++..++..++|+||+++++|.++.....     .+++..+.
T Consensus        31 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~  103 (286)
T cd07846          31 IKKFLESEDDKMVKKIAM--REIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPN-----GLDESRVR  103 (286)
T ss_pred             EEeHhhccCcchhhHHHH--HHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccC-----CCCHHHHH
Confidence            6766543322    3455  89999999999999999999999999999999999988888765432     57899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||.|||   +.+++|+||+|+|+++++++.+                     .++..|+|||.+.+. .++.
T Consensus       104 ~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  180 (286)
T cd07846         104 KYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGR  180 (286)
T ss_pred             HHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCc
Confidence            99999999999999   8999999999999999876533                     356679999998653 4678


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|||++|++|
T Consensus       181 ~~Dv~slG~~l~el~~g~~~  200 (286)
T cd07846         181 AVDIWAVGCLVTEMLTGEPL  200 (286)
T ss_pred             hHhHHHHHHHHHHHHcCCCC
Confidence            99999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.5e-26  Score=184.94  Aligned_cols=133  Identities=25%  Similarity=0.411  Sum_probs=117.4

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      .+.  +|+.++++++||||+++++++...  ...++++||+++++|.+++....     ++++.....++.|++.||.||
T Consensus        50 ~~~--~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-----~l~~~~~~~~~~~i~~al~~L  122 (264)
T cd06653          50 ALE--CEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYG-----ALTENVTRRYTRQILQGVSYL  122 (264)
T ss_pred             HHH--HHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHH
Confidence            455  899999999999999999998764  45789999999999999987543     578888999999999999999


Q ss_pred             hhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCCchhhHHHHHHHH
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALL  218 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il  218 (227)
                      |   +.+++|+||+|+||++++++.+                        .++..|+|||.+.+...+.++|+||||+++
T Consensus       123 H---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  199 (264)
T cd06653         123 H---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV  199 (264)
T ss_pred             H---hCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence            9   9999999999999999876532                        256779999999888889999999999999


Q ss_pred             HHHHhCCCC
Q 040292          219 LELLTGKKG  227 (227)
Q Consensus       219 ~el~tg~~p  227 (227)
                      |++++|+.|
T Consensus       200 ~~l~~g~~p  208 (264)
T cd06653         200 VEMLTEKPP  208 (264)
T ss_pred             HHHHhCCCC
Confidence            999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.93  E-value=4.5e-26  Score=186.65  Aligned_cols=145  Identities=20%  Similarity=0.329  Sum_probs=122.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|++++++++||||+++++++..++..++||||+. ++|.+++.....   ..+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~---~~l~~~~~~  103 (284)
T cd07860          30 LKKIRLDTETEGVPSTAI--REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPL---SGIPLPLIK  103 (284)
T ss_pred             EEEccccccccccchHHH--HHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCC---CCCCHHHHH
Confidence            7777644322    3455  99999999999999999999999999999999996 689888865332   267889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~  207 (227)
                      .++.|++.||+|||   +.+++|+||+|+||++++++.+                     .+++.|+|||.+.+.. ++.
T Consensus       104 ~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  180 (284)
T cd07860         104 SYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST  180 (284)
T ss_pred             HHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCc
Confidence            99999999999999   9999999999999999876543                     2456799999887654 588


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|+||+.|
T Consensus       181 ~~Dv~slG~il~~l~tg~~p  200 (284)
T cd07860         181 AVDIWSLGCIFAEMVTRRAL  200 (284)
T ss_pred             HHHHHHHHHHHHHHHHCCCC
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.93  E-value=4.6e-26  Score=186.47  Aligned_cols=146  Identities=26%  Similarity=0.430  Sum_probs=120.3

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEEEee------CCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGCCLE------TEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      +|.+...... .++.  .|+.++.++ +||||+++++++..      .+..+++|||+++|+|.+++.....   ..+++
T Consensus        46 ~K~~~~~~~~~~~~~--~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~---~~~~~  120 (282)
T cd06636          46 IKVMDVTEDEEEEIK--LEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG---NALKE  120 (282)
T ss_pred             EEEEecChHHHHHHH--HHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC---CCCCH
Confidence            6766544322 4556  899999998 79999999999863      3467899999999999998875332   25778


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc---
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT---  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~---  201 (227)
                      ..+..++.|++.|+.|||   +.+++|+||+|+||++++++.+                     .|++.|+|||.+.   
T Consensus       121 ~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~  197 (282)
T cd06636         121 DWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  197 (282)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCccc
Confidence            888999999999999999   8999999999999999876533                     3677899999875   


Q ss_pred             --CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 --TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 --~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        ...++.++|+|||||++|||++|+.|
T Consensus       198 ~~~~~~~~~~DvwslG~~l~el~~g~~p  225 (282)
T cd06636         198 NPDATYDYRSDIWSLGITAIEMAEGAPP  225 (282)
T ss_pred             CcCcCCCcccchhHHHHHHHHHHhCCCC
Confidence              34577899999999999999999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=8.2e-26  Score=184.98  Aligned_cols=146  Identities=18%  Similarity=0.352  Sum_probs=123.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   +.+.  +|+.++++++||||+++++++...+..++||||++ ++|.+++......  .++++..+..
T Consensus        30 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~--~~~~~~~~~~  104 (284)
T cd07836          30 LKEIHLDAEEGTPSTAI--REISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVR--GALDPNTVKS  104 (284)
T ss_pred             EEEecccccccchHHHH--HHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-ccHHHHHHhcCCC--CCcCHHHHHH
Confidence            7877654332   3445  89999999999999999999999999999999998 5898888654321  2688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~~  208 (227)
                      ++.|++.||.|||   +.+++|+||+|+||++++++.+                     .++..|++||.+.+. .++.+
T Consensus       105 ~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  181 (284)
T cd07836         105 FTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTS  181 (284)
T ss_pred             HHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcH
Confidence            9999999999999   8999999999999999876532                     346779999988654 46889


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||||+++|++++|+.|
T Consensus       182 ~Dv~slG~~l~~l~~g~~~  200 (284)
T cd07836         182 IDIWSVGCIMAEMITGRPL  200 (284)
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=4.1e-26  Score=186.51  Aligned_cols=145  Identities=26%  Similarity=0.450  Sum_probs=124.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......   ++|.  +|+.++++++||||+++++++..  ....++||||+++++|.+++.....    .+++..+
T Consensus        38 vK~~~~~~~~~~~~~~~--~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~----~~~~~~~  111 (284)
T cd05038          38 VKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRD----QINLKRL  111 (284)
T ss_pred             EEEeccccchHHHHHHH--HHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCcc----ccCHHHH
Confidence            8888765542   4677  99999999999999999999877  5578999999999999999976432    5889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..++.|++.||+|||   +++++|+||+|+||+++.++.+                        .++..|++||......
T Consensus       112 ~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  188 (284)
T cd05038         112 LLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSK  188 (284)
T ss_pred             HHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCC
Confidence            999999999999999   8999999999999999876533                        1123489999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||||++++||++|+.|
T Consensus       189 ~~~~~Di~slG~~l~el~tg~~p  211 (284)
T cd05038         189 FSSASDVWSFGVTLYELFTYGDP  211 (284)
T ss_pred             CCcccchHHHhhhhheeeccCCC
Confidence            89999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.93  E-value=4.3e-26  Score=184.47  Aligned_cols=144  Identities=28%  Similarity=0.474  Sum_probs=125.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|+.++++++|+||+++++.+...+..++|+||+++++|.+++....     .+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~  102 (264)
T cd06626          30 VKEIRIQDNDPKTIKEIA--DEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR-----ILDEHVIR  102 (264)
T ss_pred             EEEEECcccchHHHHHHH--HHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC-----CCChHHHH
Confidence            7777655442    4556  99999999999999999999999999999999999999999997643     47788899


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~  204 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++.+                         .++..|++||++....
T Consensus       103 ~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  179 (264)
T cd06626         103 VYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK  179 (264)
T ss_pred             HHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCC
Confidence            99999999999999   9999999999999999876532                         2456899999998766


Q ss_pred             ---CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 ---CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ---~~~~~DvwS~G~il~el~tg~~p  227 (227)
                         .+.++|+||||+++|++++|+.|
T Consensus       180 ~~~~~~~~Dv~s~G~il~~l~~g~~p  205 (264)
T cd06626         180 GKGHGRAADIWSLGCVVLEMATGKRP  205 (264)
T ss_pred             CCCCCcccchHHHHHHHHHHHhCCCC
Confidence               78999999999999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.93  E-value=9.6e-26  Score=181.58  Aligned_cols=146  Identities=29%  Similarity=0.535  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+..+.+++||||+++++++...+..+++|||+++++|.+++.....   ..+++..+..
T Consensus        33 iK~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~---~~~~~~~~~~  107 (258)
T smart00219       33 VKTLKEDADEQQIEEFL--REARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRP---KELSLSDLLS  107 (258)
T ss_pred             EEEccCCCChHHHHHHH--HHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhh---ccCCHHHHHH
Confidence            7888665442   4666  999999999999999999999999999999999999999999976432   0188999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.||.|||   +.+++|+||+|+||++++++.+                      .+++.|+|||...+..++.+
T Consensus       108 ~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~  184 (258)
T smart00219      108 FALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSK  184 (258)
T ss_pred             HHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcc
Confidence            9999999999999   9999999999999999987632                      14467999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +|+||+|+++++|++ |.+|
T Consensus       185 ~Di~slG~i~~~l~~~g~~p  204 (258)
T smart00219      185 SDVWSFGVLLWEIFTLGESP  204 (258)
T ss_pred             hhHHHHHHHHHHHHhCCCCC
Confidence            999999999999998 6554

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.93  E-value=1.4e-25  Score=182.37  Aligned_cols=134  Identities=23%  Similarity=0.472  Sum_probs=116.4

Q ss_pred             hHHHHHhc-CCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC-
Q 040292           90 NCIAFASQ-MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS-  167 (227)
Q Consensus        90 ~Ei~~l~~-l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~-  167 (227)
                      +|+.++.+ ++||||+++++++..++..+++|||+++++|.+++...... ...+++..+..++.|++.||.|||   + 
T Consensus        57 ~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~  132 (269)
T cd08528          57 SEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLH---KE  132 (269)
T ss_pred             HHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhc---cC
Confidence            78887765 69999999999999999999999999999999887532111 126888899999999999999999   5 


Q ss_pred             CCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          168 RPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       168 ~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+++|+||+|+||++++++.+                    .++..|++||.+.+..++.++|+||||+++|+|++|++|
T Consensus       133 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p  212 (269)
T cd08528         133 KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP  212 (269)
T ss_pred             CceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence            679999999999999876533                    467789999999988899999999999999999999877

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.93  E-value=7.5e-26  Score=185.31  Aligned_cols=127  Identities=23%  Similarity=0.413  Sum_probs=112.4

Q ss_pred             HHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEE
Q 040292           93 AFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVF  172 (227)
Q Consensus        93 ~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H  172 (227)
                      ..++...||||+.+.+++...+..++||||+++|+|.+++....     .+++..+..++.|++.|+.|||   +.+++|
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~-----~l~~~~~~~~~~ql~~~l~~lH---~~~i~H  120 (278)
T cd05606          49 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----VFSEAEMRFYAAEIILGLEHMH---NRFVVY  120 (278)
T ss_pred             HHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCEEc
Confidence            34555689999999999999999999999999999999886543     6899999999999999999999   899999


Q ss_pred             ecCCCCceeecCCCce-------------------ecccCccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          173 RDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       173 ~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |||+|+||+++.++.+                   .|+..|+|||.+..+ .++.++|+||+|+++|+|++|+.|
T Consensus       121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p  195 (278)
T cd05606         121 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP  195 (278)
T ss_pred             CCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCC
Confidence            9999999999876542                   478889999998754 588999999999999999999877

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.93  E-value=3.1e-26  Score=184.76  Aligned_cols=146  Identities=32%  Similarity=0.521  Sum_probs=126.3

Q ss_pred             eEEEcCCCCcccc--cchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTEEY--YCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~~~--~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+.........  ...+|+.++++++||||+++++++......++|||++++++|.+++....     .+++..+..+
T Consensus        29 ~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~-----~~~~~~~~~~  103 (260)
T PF00069_consen   29 VKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNK-----PLSEEEILKI  103 (260)
T ss_dssp             EEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHS-----SBBHHHHHHH
T ss_pred             EEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccccccccc-----cccccccccc
Confidence            8888776544221  11269999999999999999999999999999999999999999998322     6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc-CCCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT-TGNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~-~~~~~~~~  209 (227)
                      +.|+++||.+||   +.+++|+||||+||+++.++.+                     .++..|+|||+.. ....+.++
T Consensus       104 ~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  180 (260)
T PF00069_consen  104 AYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKS  180 (260)
T ss_dssp             HHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHH
T ss_pred             cccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999   8999999999999999976533                     4667899999998 77789999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||+|+++|+|++|..|
T Consensus       181 Di~slG~il~~l~~~~~p  198 (260)
T PF00069_consen  181 DIWSLGIILYELLTGKLP  198 (260)
T ss_dssp             HHHHHHHHHHHHHHSSSS
T ss_pred             cccccccccccccccccc
Confidence            999999999999999876

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.93  E-value=6e-26  Score=185.98  Aligned_cols=144  Identities=26%  Similarity=0.372  Sum_probs=122.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    +.+.  +|+.++++++|+||+++++++..++..++|+||++++.+..+.....     .+++..+.
T Consensus        31 vK~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~-----~~~~~~~~  103 (288)
T cd07833          31 IKKFKESEDDEDVKKTAL--REVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPG-----GLPPDAVR  103 (288)
T ss_pred             EehhhhhcccccchhHHH--HHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCC-----CCCHHHHH
Confidence            7776643322    3556  99999999999999999999999999999999999877766555432     57889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCC-CCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTG-NCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~-~~~  206 (227)
                      .++.|++.||.|||   ..+++|+||+|+||++++++.+                      .++..|+|||++... .++
T Consensus       104 ~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  180 (288)
T cd07833         104 SYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYG  180 (288)
T ss_pred             HHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcC
Confidence            99999999999999   8999999999999999876433                      345679999999887 788


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||||+++|+|++|++|
T Consensus       181 ~~~Dv~slG~~l~~l~~g~~~  201 (288)
T cd07833         181 KPVDVWAIGCIMAELLDGEPL  201 (288)
T ss_pred             chhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.93  E-value=1.4e-25  Score=186.18  Aligned_cols=148  Identities=24%  Similarity=0.332  Sum_probs=120.5

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      +|.+....     ..+.+.  +|+.++++++||||+++++++...  ...++||||++ ++|.+++..........+++.
T Consensus        32 lK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~  108 (316)
T cd07842          32 IKKFKGDKEQYTGISQSAC--REIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPS  108 (316)
T ss_pred             EEEeccccccccCccHHHH--HHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHH
Confidence            88877632     123445  899999999999999999999987  77999999997 477776653322111267888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC----CCce------------------------ecccCccccc
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----NDKL------------------------IGTFGFIAPE  198 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~----~~~~------------------------~g~~~y~aPE  198 (227)
                      .+..++.|++.||+|||   +.+++||||||+||+++.    ++.+                        .+++.|+|||
T Consensus       109 ~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  185 (316)
T cd07842         109 MVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPE  185 (316)
T ss_pred             HHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHH
Confidence            99999999999999999   999999999999999987    4322                        3466799999


Q ss_pred             cccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          199 CITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       199 ~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.+. .++.++|+||||+++++|++|++|
T Consensus       186 ~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~  215 (316)
T cd07842         186 LLLGARHYTKAIDIWAIGCIFAELLTLEPI  215 (316)
T ss_pred             HHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence            88664 478999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=1e-25  Score=185.24  Aligned_cols=144  Identities=22%  Similarity=0.314  Sum_probs=122.8

Q ss_pred             eEEEcCCCC------cccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLN------TEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~------~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      +|.+.....      .+.+.  +|+.++.++ +|+||+++++++..+...++|+||+++++|.+++....     ++++.
T Consensus        33 iK~~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~  105 (290)
T cd05613          33 MKVLKKATIVQKAKTTEHTR--TERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRE-----RFKEQ  105 (290)
T ss_pred             EEEeehhhhhhcchHHHHHH--HHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcC-----CCCHH
Confidence            777764321      13455  899999999 69999999999998888999999999999999987643     57888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCC-
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTG-  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~-  203 (227)
                      .+..++.|++.||.|||   +.+++||||+|+||+++.++.+                      .|+..|+|||.+... 
T Consensus       106 ~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  182 (290)
T cd05613         106 EVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGD  182 (290)
T ss_pred             HHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCC
Confidence            88889999999999999   9999999999999999876533                      367789999998753 


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 -NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 -~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .++.++|+||||+++|+|++|..|
T Consensus       183 ~~~~~~~Dv~slG~~l~~ll~g~~p  207 (290)
T cd05613         183 GGHDKAVDWWSMGVLMYELLTGASP  207 (290)
T ss_pred             CCCCccccHHHHHHHHHHHhcCCCC
Confidence             467889999999999999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-26  Score=184.47  Aligned_cols=132  Identities=24%  Similarity=0.378  Sum_probs=117.3

Q ss_pred             hHHHHHhcC-CCcccceeEEEEeeC----CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           90 NCIAFASQM-SHKNILKFVGCCLET----EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        90 ~Ei~~l~~l-~H~niv~l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      +|+++.=+. .|||||++++++.+.    ..+.+|||.|+||.|...+.+++.   +++++.++-.|+.||..|+.||| 
T Consensus       103 rEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~---~afTErea~eI~~qI~~Av~~lH-  178 (400)
T KOG0604|consen  103 REVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGD---QAFTEREASEIMKQIGLAVRYLH-  178 (400)
T ss_pred             hHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHccc---ccchHHHHHHHHHHHHHHHHHHH-
Confidence            899877666 899999999998753    246689999999999999987653   47999999999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCC-----------------------ceecccCccccccccCCCCCchhhHHHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDND-----------------------KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL  221 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~-----------------------~~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el  221 (227)
                        +.+|.||||||+|+|...+.                       +.+-||+|.|||++-..+|+..+|+||+||++|-|
T Consensus       179 --~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIl  256 (400)
T KOG0604|consen  179 --SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL  256 (400)
T ss_pred             --hcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHh
Confidence              99999999999999987542                       12678999999999988999999999999999999


Q ss_pred             HhCCCC
Q 040292          222 LTGKKG  227 (227)
Q Consensus       222 ~tg~~p  227 (227)
                      ++|.+|
T Consensus       257 LCGyPP  262 (400)
T KOG0604|consen  257 LCGYPP  262 (400)
T ss_pred             hcCCCc
Confidence            999988

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=1.9e-25  Score=178.73  Aligned_cols=145  Identities=29%  Similarity=0.448  Sum_probs=128.0

Q ss_pred             eEEEcCCCC--cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLN--TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+.....  .+.+.  +|+..+++++|||++++++++...+..++++||+++++|.+++....    .++++..+..+
T Consensus        30 ~k~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~----~~~~~~~~~~i  103 (253)
T cd05122          30 IKVIKLESKEKKEKII--NEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTN----QTLTESQIAYV  103 (253)
T ss_pred             EEEecccchhHHHHHH--HHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcC----CCCCHHHHHHH
Confidence            788776553  35667  99999999999999999999999999999999999999999987653    26889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhhH
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSDV  211 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~Dv  211 (227)
                      +.|++.||.+||   ..+++|+||+|+||++++++.+                    .++..|++||.+.....+.++|+
T Consensus       104 ~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv  180 (253)
T cd05122         104 CKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADI  180 (253)
T ss_pred             HHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccH
Confidence            999999999999   8999999999999999876532                    35677999999988888999999


Q ss_pred             HHHHHHHHHHHhCCCC
Q 040292          212 YSFGALLLELLTGKKG  227 (227)
Q Consensus       212 wS~G~il~el~tg~~p  227 (227)
                      ||||+++++|++|+.|
T Consensus       181 ~slG~il~~l~~g~~p  196 (253)
T cd05122         181 WSLGITAIELAEGKPP  196 (253)
T ss_pred             HHHHHHHHHHHhCCCC
Confidence            9999999999999876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.93  E-value=1.3e-25  Score=186.49  Aligned_cols=146  Identities=21%  Similarity=0.331  Sum_probs=119.4

Q ss_pred             eEEEcCCCCcc--cccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNTE--EYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+.......  .....+|+.++++++|+||+++++++...  +..++||||+. ++|.+++....    ..+++..+.
T Consensus        37 iK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~l~~~~~~  111 (309)
T cd07845          37 LKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMP----TPFSESQVK  111 (309)
T ss_pred             EEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCHHHHHHhcc----cCCCHHHHH
Confidence            78776443321  11223899999999999999999998765  45799999997 58888876533    268899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||+|||   +.+++||||+|+||++++++.+                     .+++.|+|||.+.+. .++.
T Consensus       112 ~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  188 (309)
T cd07845         112 CLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTT  188 (309)
T ss_pred             HHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCc
Confidence            99999999999999   9999999999999999876543                     235569999998654 4789


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+|+++|+|++|++|
T Consensus       189 ~~DvwslG~il~el~~g~~~  208 (309)
T cd07845         189 AIDMWAVGCILAELLAHKPL  208 (309)
T ss_pred             hHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.3e-25  Score=181.68  Aligned_cols=144  Identities=24%  Similarity=0.282  Sum_probs=120.9

Q ss_pred             eEEEcCCCCc-----ccccchhHHHH-HhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAF-ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......     ..+.  .|..+ ....+|||++++++++..++..++|+||+++++|.+++....     ++++..
T Consensus        26 vK~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~   98 (260)
T cd05611          26 IKVLKKSDMIAKNQVTNVK--AERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLG-----GLPEDW   98 (260)
T ss_pred             EEEecchhhhHHHHHHHHH--HHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcC-----CCCHHH
Confidence            7777543221     1223  45443 455699999999999999999999999999999999997543     678899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCccccccccCCCCCchhh
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +..++.|++.||.|||   +.+++|+||+|+||++++++.+                 .+++.|++||.+.+..++.++|
T Consensus        99 ~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~D  175 (260)
T cd05611          99 AKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSD  175 (260)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCccChhhhcCCCCcchhh
Confidence            9999999999999999   8999999999999999876533                 3677899999998877899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||+|+++|+|++|..|
T Consensus       176 v~slG~il~~l~~g~~p  192 (260)
T cd05611         176 WWSLGCVIFEFLFGYPP  192 (260)
T ss_pred             hHHHHHHHHHHHHCCCC
Confidence            99999999999999987

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.93  E-value=6e-26  Score=183.33  Aligned_cols=144  Identities=26%  Similarity=0.343  Sum_probs=125.6

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.++++++||||+++++.+..++..++++||+++++|.+++....     .+++..+
T Consensus        23 ~k~~~~~~~~~~~~~~~~~--~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~   95 (265)
T cd05579          23 IKVIKKADMIRKNQVDQVL--TERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVG-----SLDEDVA   95 (265)
T ss_pred             EEEecchhhhhhhHHHHHH--HHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcC-----CCCHHHH
Confidence            7877654331     3555  89999999999999999999999999999999999999999997643     6888999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------------ecccCcccccc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------------IGTFGFIAPEC  199 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------------~g~~~y~aPE~  199 (227)
                      ..++.|++.||.|||   +.+++|+||+|+||++++++.+                             .++..|++||.
T Consensus        96 ~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~  172 (265)
T cd05579          96 RIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV  172 (265)
T ss_pred             HHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHH
Confidence            999999999999999   9999999999999999876533                             24557999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ......+.++|+||||+++|++++|+.|
T Consensus       173 ~~~~~~~~~~Dv~slG~~~~~l~~g~~p  200 (265)
T cd05579         173 ILGQGHSKTVDWWSLGCILYEFLVGIPP  200 (265)
T ss_pred             hcCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence            9888889999999999999999999876

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.93  E-value=1e-25  Score=184.41  Aligned_cols=145  Identities=19%  Similarity=0.307  Sum_probs=122.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||++......    +.+.  +|+.++++++|||++++++++.+++..++++||++ ++|.+++.....   ..+++..+.
T Consensus        29 ik~~~~~~~~~~~~~~~~--~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~---~~~~~~~~~  102 (283)
T cd07835          29 LKKIRLETEDEGVPSTAI--REISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPL---TGLDPPLIK  102 (283)
T ss_pred             EEEeecccccccchhHHH--HHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCC---CCCCHHHHH
Confidence            7777644322    3455  89999999999999999999999999999999995 699998875432   257899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||+|||   +++++|+||+|+||++++++.+                     .+++.|+|||++.+. .++.
T Consensus       103 ~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  179 (283)
T cd07835         103 SYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYST  179 (283)
T ss_pred             HHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCc
Confidence            99999999999999   8999999999999999876533                     246679999988664 4688


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|++|++|
T Consensus       180 ~~Di~slG~~l~~l~~g~~p  199 (283)
T cd07835         180 PVDIWSIGCIFAEMVNRRPL  199 (283)
T ss_pred             HHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.7e-26  Score=193.04  Aligned_cols=172  Identities=26%  Similarity=0.330  Sum_probs=138.0

Q ss_pred             cccccHHHHHHhhcCCCCCCeeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC----cceeEe
Q 040292           47 IRNFIALELEGATNNYDPGKGFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE----VPILVF  120 (227)
Q Consensus        47 ~~~~~~~~l~~~~~~f~~~~~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV~  120 (227)
                      .+.+.+.++......-.+..|.+++..  ||.+..... +.|...++|--+--++|+||++++++-..+.    +++||+
T Consensus       209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~k-qs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt  287 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEK-QSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT  287 (534)
T ss_pred             CCchhhHHHhhcCccceeehhhccCceeEEEecCHHHH-HHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence            445677777665554445558887766  999876533 4566234455556679999999999877655    789999


Q ss_pred             ecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc------CCCCeEEecCCCCceeecCCCce------
Q 040292          121 EFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG------FSRPIVFRDIKPFTTHVNDNDKL------  188 (227)
Q Consensus       121 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~------~~~~i~H~dlkp~nil~~~~~~~------  188 (227)
                      ||.+.|+|.++|...      .++|....+++..+++||+|||+.      ..++|+|||||+.|||+.++.+.      
T Consensus       288 ~fh~kGsL~dyL~~n------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG  361 (534)
T KOG3653|consen  288 EFHPKGSLCDYLKAN------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG  361 (534)
T ss_pred             eeccCCcHHHHHHhc------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence            999999999999865      689999999999999999999953      46789999999999999988654      


Q ss_pred             -----------------ecccCccccccccCCC-CC-----chhhHHHHHHHHHHHHhCC
Q 040292          189 -----------------IGTFGFIAPECITTGN-CN-----EKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       189 -----------------~g~~~y~aPE~~~~~~-~~-----~~~DvwS~G~il~el~tg~  225 (227)
                                       +||..|||||++.+.. +.     .+.||||+|.++|||+++.
T Consensus       362 LAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC  421 (534)
T KOG3653|consen  362 LALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRC  421 (534)
T ss_pred             eeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence                             6999999999997653 22     4689999999999999864

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.2e-26  Score=191.22  Aligned_cols=166  Identities=23%  Similarity=0.364  Sum_probs=129.5

Q ss_pred             ccHHHHHHhhcCCCCCCeeecCCC--eEEEcCCCCcccccchhHHHHHhc--CCCcccceeEEEEeeCC----cceeEee
Q 040292           50 FIALELEGATNNYDPGKGFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQ--MSHKNILKFVGCCLETE----VPILVFE  121 (227)
Q Consensus        50 ~~~~~l~~~~~~f~~~~~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~~----~~~lV~E  121 (227)
                      +.+.+...-........|.++|..  ||.+....... +.  +|.++.+.  |+|+||+.+++.-..++    ..+||.+
T Consensus       213 I~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~S-Wf--rEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd  289 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERS-WF--RETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD  289 (513)
T ss_pred             eEEEEEecCccccceeeccccCCceEEEEecccchhh-hh--hHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence            333333333444444558888877  99997654333 33  56666554  59999999998876654    5789999


Q ss_pred             cccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh-----cCCCCeEEecCCCCceeecCCCce--------
Q 040292          122 FVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV-----GFSRPIVFRDIKPFTTHVNDNDKL--------  188 (227)
Q Consensus       122 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~-----~~~~~i~H~dlkp~nil~~~~~~~--------  188 (227)
                      |-++|||.|+|...      .++....+.++..+|.||++||.     ...+.|.|||||+.|||+.+++.+        
T Consensus       290 YHe~GSL~DyL~r~------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA  363 (513)
T KOG2052|consen  290 YHEHGSLYDYLNRN------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  363 (513)
T ss_pred             cccCCcHHHHHhhc------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence            99999999999873      68889999999999999999994     347789999999999999988754        


Q ss_pred             -----------------ecccCccccccccCCC----C--CchhhHHHHHHHHHHHHhC
Q 040292          189 -----------------IGTFGFIAPECITTGN----C--NEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 -----------------~g~~~y~aPE~~~~~~----~--~~~~DvwS~G~il~el~tg  224 (227)
                                       +||-.|||||++....    +  -..+||||||.++||++.+
T Consensus       364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarR  422 (513)
T KOG2052|consen  364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARR  422 (513)
T ss_pred             EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHH
Confidence                             7999999999996432    1  2468999999999998753

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.93  E-value=2.5e-25  Score=187.60  Aligned_cols=149  Identities=20%  Similarity=0.415  Sum_probs=120.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeC-CcceeEeecccCCChhhhhcCCCCC----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLET-EVPILVFEFVACGTLADRIHDPNGS----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~----------  138 (227)
                      ||.++.....   +.+.  +|+.++.++ +||||++++++|... ...++||||+++|+|.+++......          
T Consensus        42 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~  119 (343)
T cd05103          42 VKMLKEGATHSEHRALM--SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDAR  119 (343)
T ss_pred             EEEeccCCChHHHHHHH--HHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccc
Confidence            8888754433   3455  899999999 789999999988654 4678999999999999988643210          


Q ss_pred             ----------------------------------------------------CCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292          139 ----------------------------------------------------QLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus       139 ----------------------------------------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                                                                          ....+++..+..++.|++.||.|||   
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---  196 (343)
T cd05103         120 FRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---  196 (343)
T ss_pred             cccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---
Confidence                                                                0013677888899999999999999   


Q ss_pred             CCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh
Q 040292          167 SRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       167 ~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t  223 (227)
                      +++++||||||+||+++.++.+                       .+++.|+|||.+....++.++|+||||+++|+|++
T Consensus       197 ~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~  276 (343)
T cd05103         197 SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS  276 (343)
T ss_pred             hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHH
Confidence            9999999999999999875533                       12346999999988889999999999999999997


Q ss_pred             -CCCC
Q 040292          224 -GKKG  227 (227)
Q Consensus       224 -g~~p  227 (227)
                       |..|
T Consensus       277 ~g~~p  281 (343)
T cd05103         277 LGASP  281 (343)
T ss_pred             CCCCC
Confidence             7655

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.93  E-value=2.6e-25  Score=179.62  Aligned_cols=151  Identities=21%  Similarity=0.334  Sum_probs=124.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+......    +.+.  +|+.++++++||||+++++++..  +...++++||+++++|.+++...... ..++++..
T Consensus        30 ~k~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~-~~~l~~~~  106 (265)
T cd08217          30 WKEIDYGNMTEKEKQQLV--SEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKE-RKYIEEEF  106 (265)
T ss_pred             EEEEecccCCHHHHHHHH--HHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhc-ccCCCHHH
Confidence            6776543322    3455  89999999999999999998764  34578999999999999998653211 12688999


Q ss_pred             HHHHHHHHHHHHHHhhhcC--CCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC
Q 040292          148 RLKVAMEIANAVAYLHVGF--SRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~--~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~  204 (227)
                      +..++.|++.||.|||..+  +.+++|+||+|+||++++++.+                     .+++.|+|||.+....
T Consensus       107 ~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~  186 (265)
T cd08217         107 IWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMS  186 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcccccccccCCCccChhhhcCCC
Confidence            9999999999999999543  6789999999999999876532                     4677899999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||||+++++|++|+.|
T Consensus       187 ~~~~~Dv~slG~il~~l~~g~~p  209 (265)
T cd08217         187 YDEKSDIWSLGCLIYELCALSPP  209 (265)
T ss_pred             CCchhHHHHHHHHHHHHHHCCCc
Confidence            89999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=1.5e-25  Score=180.02  Aligned_cols=144  Identities=26%  Similarity=0.379  Sum_probs=126.6

Q ss_pred             eEEEcCCCC----cccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN----TEEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+.....    .+.+.  +|+.++++++||||+++++.+...  ...++|+||+++++|.+++....     .+++..
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~  102 (260)
T cd06606          30 VKSVELSGDSEEELEALE--REIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-----KLPEPV  102 (260)
T ss_pred             EEEeeccccchHHHHHHH--HHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-----CCCHHH
Confidence            777765543    25666  999999999999999999999988  78999999999999999997653     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~  204 (227)
                      +..++.|++.||.|||   +.+++|+||+|+||++++++.+                       .++..|++||......
T Consensus       103 ~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~  179 (260)
T cd06606         103 IRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE  179 (260)
T ss_pred             HHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCC
Confidence            9999999999999999   8999999999999999875432                       2556799999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.++|+||||++++++++|..|
T Consensus       180 ~~~~~Dv~slG~il~~l~~g~~p  202 (260)
T cd06606         180 YGRAADIWSLGCTVIEMATGKPP  202 (260)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=6.1e-25  Score=178.84  Aligned_cols=149  Identities=21%  Similarity=0.450  Sum_probs=119.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCC-CCCCcc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPN-GSQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~-~~~~~~  142 (227)
                      ||.+......    +++.  +|+.++++++||||+++++++....      ..++++||+++|+|.+++.... ......
T Consensus        32 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  109 (273)
T cd05074          32 VKMLKADIFSSSDIEEFL--REAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFT  109 (273)
T ss_pred             EEEeccccCChHHHHHHH--HHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCC
Confidence            7877654332    3566  9999999999999999999886542      2468899999999988875322 111125


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccccc
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPEC  199 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~  199 (227)
                      +++.....++.|++.||+|||   +.+++||||||+||++++++.+                       .+++.|++||.
T Consensus       110 l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~  186 (273)
T cd05074         110 LPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALES  186 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhH
Confidence            788889999999999999999   8999999999999999876543                       12356889999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +....++.++||||||+++|+|++ |++|
T Consensus       187 ~~~~~~~~~sDi~slG~il~el~~~g~~p  215 (273)
T cd05074         187 LADNVYTTHSDVWAFGVTMWEIMTRGQTP  215 (273)
T ss_pred             HhcCccchhhhhHHHHHHHHHHhhCCCCC
Confidence            888888999999999999999999 6655

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.8e-25  Score=177.11  Aligned_cols=144  Identities=25%  Similarity=0.441  Sum_probs=127.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|++++++++|||++++++++..++..++++||+++++|.+++....     ++++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~-----~l~~~~~~  102 (254)
T cd06627          30 IKQISLEKIKEEALKSIM--QEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFG-----PFPESLVA  102 (254)
T ss_pred             EEEecccccCHHHHHHHH--HHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhcc-----CCCHHHHH
Confidence            7777665432    4566  99999999999999999999999999999999999999999987653     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++.+                     .++..|+|||.......+.+
T Consensus       103 ~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~  179 (254)
T cd06627         103 VYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTA  179 (254)
T ss_pred             HHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcc
Confidence            99999999999999   9999999999999999876532                     35677999999987778899


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++|+|++|..|
T Consensus       180 ~Dv~~lG~~l~~l~~g~~p  198 (254)
T cd06627         180 SDIWSLGCTVIELLTGNPP  198 (254)
T ss_pred             hhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999876

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.93  E-value=6.2e-25  Score=182.92  Aligned_cols=144  Identities=26%  Similarity=0.448  Sum_probs=121.9

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.++++++|||++++++++......++||||+. |++.+++.....    ++++..+
T Consensus        51 ik~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~l~~~~~  123 (313)
T cd06633          51 VKKMSYSGKQTNEKWQDII--KEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKK----PLQEVEI  123 (313)
T ss_pred             EEEEeccccCchHHHHHHH--HHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCC----CCCHHHH
Confidence            7777543322     3455  89999999999999999999999999999999996 688877764332    6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCcccccccc---CCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECIT---TGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~---~~~~~~~  208 (227)
                      ..++.|++.|+.|||   +.+++|+||+|+||++++++.+                 .|+..|+|||++.   ...++.+
T Consensus       124 ~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  200 (313)
T cd06633         124 AAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGK  200 (313)
T ss_pred             HHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccccChhhccccCCCCCCch
Confidence            999999999999999   8999999999999999876533                 4677899999984   3457889


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||||+++|+|++|.+|
T Consensus       201 sDv~slGvil~el~~g~~p  219 (313)
T cd06633         201 VDVWSLGITCIELAERKPP  219 (313)
T ss_pred             hhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.92  E-value=5.1e-25  Score=179.95  Aligned_cols=145  Identities=26%  Similarity=0.400  Sum_probs=118.8

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.++..... .....++|+.++.++ +|||++++++++.++  +..++|+||++ ++|.+.+.....    .+++..+.
T Consensus        29 ik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~~~~~~~~  103 (282)
T cd07831          29 IKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKR----PLPEKRVK  103 (282)
T ss_pred             EEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccC----CCCHHHHH
Confidence            7777654322 222223799999999 499999999999887  78999999997 688888865432    68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC-CCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT-GNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~-~~~~~~  208 (227)
                      .++.|++.||.|||   +.+++||||+|+||++++ +.+                    .++..|+|||.+.. ..++.+
T Consensus       104 ~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (282)
T cd07831         104 SYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPK  179 (282)
T ss_pred             HHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcc
Confidence            99999999999999   899999999999999987 422                    35677999997654 456889


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+||++|||++|++|
T Consensus       180 ~Di~slGv~l~el~~~~~p  198 (282)
T cd07831         180 MDIWAVGCVFFEILSLFPL  198 (282)
T ss_pred             hhHHHHHHHHHHHHcCCcC
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.92  E-value=5.7e-25  Score=181.02  Aligned_cols=148  Identities=19%  Similarity=0.271  Sum_probs=119.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC-CCcccceeEEEEeeCCc-----ceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEV-----PILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~-----~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    ..+.  +|+.+++++ +||||+++++++...+.     .++||||+++ +|.+++..........+
T Consensus        31 lK~~~~~~~~~~~~~~~~--~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~  107 (295)
T cd07837          31 LKKTRLEMDEEGIPPTAL--REISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPL  107 (295)
T ss_pred             EEeehhhccccCCchHHH--HHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCC
Confidence            7776544322    3455  899999999 56999999999987665     7999999985 89888865432212368


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-CCce---------------------ecccCcccccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKL---------------------IGTFGFIAPECIT  201 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-~~~~---------------------~g~~~y~aPE~~~  201 (227)
                      ++..+..++.|++.||.|||   +++++||||+|+||+++. ++.+                     .+++.|+|||.+.
T Consensus       108 ~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~  184 (295)
T cd07837         108 PAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLL  184 (295)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCccccCCcccccCCCChHHhh
Confidence            89999999999999999999   999999999999999997 4322                     2356799999886


Q ss_pred             CC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +. .++.++|+||||+++|+|++|.+|
T Consensus       185 ~~~~~~~~~Di~slG~~l~~l~~g~~~  211 (295)
T cd07837         185 GSTHYSTPVDIWSVGCIFAEMSRKQPL  211 (295)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence            54 478999999999999999999865

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=1.8e-25  Score=190.07  Aligned_cols=134  Identities=23%  Similarity=0.327  Sum_probs=114.4

Q ss_pred             ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           84 EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      +-|.  +|+.+|.+| .|.+||++++|-..++..|+||||=+ -+|..+|.......   ..| .+..+..|++.++.++
T Consensus       404 ~gy~--nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~---~~~-~lk~ywkqML~aV~~I  476 (677)
T KOG0596|consen  404 DGYR--NEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSID---PDW-FLKFYWKQMLLAVKTI  476 (677)
T ss_pred             HHHH--HHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCC---chH-HHHHHHHHHHHHHHHH
Confidence            4677  999999999 79999999999999999999999864 69999998765421   223 6788999999999999


Q ss_pred             hhcCCCCeEEecCCCCceeecCCC----------------------ceecccCccccccccCCC-----------CCchh
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDND----------------------KLIGTFGFIAPECITTGN-----------CNEKS  209 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~----------------------~~~g~~~y~aPE~~~~~~-----------~~~~~  209 (227)
                      |   ..+|+|.||||.|+++-+..                      ..+||+.||+||.+....           .++++
T Consensus       477 H---~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~S  553 (677)
T KOG0596|consen  477 H---QHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKS  553 (677)
T ss_pred             H---HhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCcc
Confidence            9   99999999999999876421                      227999999999995432           46799


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||+||+||+|+.|++|
T Consensus       554 DvWSLGCILYqMvYgktP  571 (677)
T KOG0596|consen  554 DVWSLGCILYQMVYGKTP  571 (677)
T ss_pred             chhhhhhHHHHHHhcCCc
Confidence            999999999999999998

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.92  E-value=5.4e-25  Score=182.84  Aligned_cols=144  Identities=26%  Similarity=0.436  Sum_probs=121.0

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +++.  +|+.+++.++|||++++.+++..+...++|+||+. |++.+.+.....    ++++..+
T Consensus        45 ik~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~l~~~~~  117 (308)
T cd06634          45 IKKMSYSGKQSNEKWQDII--KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKK----PLQEVEI  117 (308)
T ss_pred             EEEEecccccChHHHHHHH--HHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCC----CCCHHHH
Confidence            7777543211     3455  89999999999999999999999999999999997 688877754332    6788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCcccccccc---CCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECIT---TGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~---~~~~~~~  208 (227)
                      ..++.|++.|+.|||   +.+++||||+|+||+++.++.+                 .+++.|+|||.+.   ...++.+
T Consensus       118 ~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  194 (308)
T cd06634         118 AAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGK  194 (308)
T ss_pred             HHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccccCHHHHhhcccCCCCcc
Confidence            999999999999999   8999999999999999876543                 3677899999874   3457889


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|||||||++|+|++|..|
T Consensus       195 ~Di~slG~il~el~~g~~p  213 (308)
T cd06634         195 VDVWSLGITCIELAERKPP  213 (308)
T ss_pred             cchHHHHHHHHHHHcCCCC
Confidence            9999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.92  E-value=4.5e-25  Score=180.52  Aligned_cols=149  Identities=23%  Similarity=0.359  Sum_probs=119.1

Q ss_pred             eEEEcCCCCc-ccccchhHHHH-HhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAF-ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.++..... .+.....|+.. ++.++||||+++++++..++..+++|||++ |+|.+++....... ..+++..+..+
T Consensus        31 iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~  108 (283)
T cd06617          31 VKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKG-LTIPEDILGKI  108 (283)
T ss_pred             EEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCC-CCCCHHHHHHH
Confidence            7887655332 22222267664 566799999999999999999999999997 68888776432212 36899999999


Q ss_pred             HHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCCce--------------------ecccCccccccccC----CCCC
Q 040292          152 AMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT----GNCN  206 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~----~~~~  206 (227)
                      +.|++.||.|||   ++ +++||||||+||+++.++.+                    .++..|+|||.+.+    ..++
T Consensus       109 ~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (283)
T cd06617         109 AVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYD  185 (283)
T ss_pred             HHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccC
Confidence            999999999999   76 99999999999999876532                    35677999998864    3468


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||||+++|+|++|+.|
T Consensus       186 ~~~Di~slG~~l~~l~~g~~p  206 (283)
T cd06617         186 VKSDVWSLGITMIELATGRFP  206 (283)
T ss_pred             ccccchhhHHHHHHHHhCCCC
Confidence            899999999999999999876

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.92  E-value=7.9e-25  Score=181.16  Aligned_cols=146  Identities=21%  Similarity=0.329  Sum_probs=117.9

Q ss_pred             eEEEcCCCCcc--cccchhHHHHHhcCCCcccceeEEEEeeCCc--------ceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNTE--EYYCFNCIAFASQMSHKNILKFVGCCLETEV--------PILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~--------~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......+  ...+.+|+.++++++||||++++++|.....        .++||||+. ++|.+.+.....    .+
T Consensus        42 ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----~~  116 (310)
T cd07865          42 LKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNV----KF  116 (310)
T ss_pred             EEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCC-cCHHHHHHhccc----CC
Confidence            77775443322  1122389999999999999999999876543        489999996 588888765432    57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPE  198 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE  198 (227)
                      ++..+..++.|++.||+|||   +++++|+||+|+||+++.++.+                         .++..|+|||
T Consensus       117 ~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  193 (310)
T cd07865         117 TLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPE  193 (310)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcH
Confidence            89999999999999999999   8999999999999999876532                         2455699999


Q ss_pred             cccCCC-CCchhhHHHHHHHHHHHHhCCCC
Q 040292          199 CITTGN-CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       199 ~~~~~~-~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.+.. ++.++|+||||+++|+|++|.+|
T Consensus       194 ~~~~~~~~~~~~Di~slG~~l~el~t~~~~  223 (310)
T cd07865         194 LLLGERDYGPPIDMWGAGCIMAEMWTRSPI  223 (310)
T ss_pred             HhcCCcccCchhhhHHHHHHHHHHHhCCCC
Confidence            886654 68899999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.92  E-value=5.1e-25  Score=186.32  Aligned_cols=141  Identities=23%  Similarity=0.335  Sum_probs=118.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++....      ..|+||||+. ++|.+.+..       .+
T Consensus        46 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~l  115 (353)
T cd07850          46 IKKLSRPFQNVTHAKRAY--RELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQM-------DL  115 (353)
T ss_pred             EEecCccccChhHHHHHH--HHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhh-------cC
Confidence            7877543222    3455  8999999999999999999886442      4689999996 588887753       36


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~  203 (227)
                      ++..+..++.|++.||+|||   ..+++||||||+||+++.++.+                    .++..|+|||.+.+.
T Consensus       116 ~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  192 (353)
T cd07850         116 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM  192 (353)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCC
Confidence            78888999999999999999   8999999999999999876533                    366789999999988


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++|+|||||++|+|++|+.|
T Consensus       193 ~~~~~~DvwslG~~l~~l~~g~~p  216 (353)
T cd07850         193 GYKENVDIWSVGCIMGEMIRGTVL  216 (353)
T ss_pred             CCCCchhhHhHHHHHHHHHHCCCC
Confidence            899999999999999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.92  E-value=8.1e-25  Score=180.24  Aligned_cols=145  Identities=20%  Similarity=0.308  Sum_probs=119.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|+.++++++||||+++++++..++..++||||++ ++|.+++.....   ..+++..+.
T Consensus        32 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~~  105 (294)
T PLN00009         32 LKKIRLEQEDEGVPSTAI--REISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPD---FAKNPRLIK  105 (294)
T ss_pred             EEehhhccccccchHHHH--HHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCC---CCcCHHHHH
Confidence            7776543322    3455  89999999999999999999999999999999996 588887754331   135777888


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-e---------------------ecccCccccccccCC-CCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-L---------------------IGTFGFIAPECITTG-NCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-~---------------------~g~~~y~aPE~~~~~-~~~  206 (227)
                      .++.|++.||+|||   +++++|+||+|+||+++.++. +                     .+++.|+|||++.+. .++
T Consensus       106 ~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  182 (294)
T PLN00009        106 TYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYS  182 (294)
T ss_pred             HHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCC
Confidence            99999999999999   899999999999999985431 1                     245679999988654 478


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+|+++|+|+||++|
T Consensus       183 ~~~Dv~slG~i~~~l~tg~~p  203 (294)
T PLN00009        183 TPVDIWSVGCIFAEMVNQKPL  203 (294)
T ss_pred             cHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999876

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.92  E-value=7.1e-25  Score=184.21  Aligned_cols=142  Identities=25%  Similarity=0.410  Sum_probs=117.4

Q ss_pred             eEEEcCCC----CcccccchhHHHHHhcC-CCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNL----NTEEYYCFNCIAFASQM-SHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||++....    ....+.  +|+.+++++ +||||++++++|...  ...++||||++ ++|.+++...      .+++.
T Consensus        37 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~------~~~~~  107 (337)
T cd07852          37 LKKIFDAFRNATDAQRTF--REIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRAN------ILEDV  107 (337)
T ss_pred             EEeeccccCcchhhhhhh--HHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcC------CCCHH
Confidence            77764321    113455  899999999 999999999998654  35799999997 5998888653      46788


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------------ecccCccccccc
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------------IGTFGFIAPECI  200 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------------~g~~~y~aPE~~  200 (227)
                      .+..++.|++.||.|||   +++++|+||+|+||+++.++.+                          .|+..|+|||.+
T Consensus       108 ~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  184 (337)
T cd07852         108 HKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEIL  184 (337)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceee
Confidence            88899999999999999   9999999999999999876532                          356679999987


Q ss_pred             cC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .. ..++.++|+||||+++|+|++|+.|
T Consensus       185 ~~~~~~~~~sDi~slG~~l~el~tg~~p  212 (337)
T cd07852         185 LGSTRYTKGVDMWSVGCILGEMLLGKPL  212 (337)
T ss_pred             eccccccccchHHHHHHHHHHHHhCCCC
Confidence            65 4578899999999999999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.92  E-value=1e-24  Score=183.01  Aligned_cols=130  Identities=23%  Similarity=0.363  Sum_probs=114.9

Q ss_pred             hhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           89 FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        89 ~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      .+|+.++++++||||+++++++..++..++||||+. |+|.+++....     .+++.....++.|++.||.|||   +.
T Consensus        68 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH---~~  138 (335)
T PTZ00024         68 LRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKI-----RLTESQVKCILLQILNGLNVLH---KW  138 (335)
T ss_pred             HHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---hC
Confidence            389999999999999999999999999999999997 69999887543     5788999999999999999999   99


Q ss_pred             CeEEecCCCCceeecCCCce-----------------------------------ecccCccccccccCCC-CCchhhHH
Q 040292          169 PIVFRDIKPFTTHVNDNDKL-----------------------------------IGTFGFIAPECITTGN-CNEKSDVY  212 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~~~-----------------------------------~g~~~y~aPE~~~~~~-~~~~~Dvw  212 (227)
                      +++|+||+|+||+++.++.+                                   .+++.|+|||.+.+.. ++.++|+|
T Consensus       139 ~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  218 (335)
T PTZ00024        139 YFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMW  218 (335)
T ss_pred             CeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHH
Confidence            99999999999999876533                                   1355799999987644 68999999


Q ss_pred             HHHHHHHHHHhCCCC
Q 040292          213 SFGALLLELLTGKKG  227 (227)
Q Consensus       213 S~G~il~el~tg~~p  227 (227)
                      |+|+++|+|++|++|
T Consensus       219 slG~~l~el~tg~~p  233 (335)
T PTZ00024        219 SVGCIFAELLTGKPL  233 (335)
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999999875

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=4.2e-25  Score=190.49  Aligned_cols=130  Identities=18%  Similarity=0.326  Sum_probs=121.9

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      .|-++|..-+++-||+||-.|.+++.+|+||+|++||++..+|-..+     -+.+..++.++..+..|+++.|   ..+
T Consensus       678 AERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmg-----IFeE~LARFYIAEltcAiesVH---kmG  749 (1034)
T KOG0608|consen  678 AERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMG-----IFEEDLARFYIAELTCAIESVH---KMG  749 (1034)
T ss_pred             hhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhc-----cCHHHHHHHHHHHHHHHHHHHH---hcc
Confidence            78889999999999999999999999999999999999999887665     6888899999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce-------------------------------------------------------------
Q 040292          170 IVFRDIKPFTTHVNDNDKL-------------------------------------------------------------  188 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~-------------------------------------------------------------  188 (227)
                      ++||||||+|||||.+|.+                                                             
T Consensus       750 FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ah  829 (1034)
T KOG0608|consen  750 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAH  829 (1034)
T ss_pred             ceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhh
Confidence            9999999999999987643                                                             


Q ss_pred             --ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 --IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 --~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        +||+.|+|||++....++..+|.||.||+||||+-|++|
T Consensus       830 slvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~p  870 (1034)
T KOG0608|consen  830 SLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPP  870 (1034)
T ss_pred             hhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCC
Confidence              699999999999999999999999999999999999987

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.9e-25  Score=176.90  Aligned_cols=144  Identities=28%  Similarity=0.386  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     ..+.  +|+.++++++||||+++++.+..++..++||||+++++|.+++....     .+++...
T Consensus        23 ~k~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~-----~l~~~~~   95 (250)
T cd05123          23 MKVLKKKKIIKRKEVEHTL--TERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEG-----RFSEERA   95 (250)
T ss_pred             EEEeehhhhcchHHHHHHH--HHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcC-----CCCHHHH
Confidence            7777654322     3566  99999999999999999999999999999999999999999997653     5788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.|+.|||   +.+++|+||+|+||++++++.+                     .++..|++||...+...+.
T Consensus        96 ~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~  172 (250)
T cd05123          96 RFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGK  172 (250)
T ss_pred             HHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCc
Confidence            999999999999999   8999999999999999876532                     3567899999998888899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|++++|+.|
T Consensus       173 ~~D~~slG~~~~~l~~g~~p  192 (250)
T cd05123         173 AVDWWSLGVLLYEMLTGKPP  192 (250)
T ss_pred             hhhHHHHHHHHHHHHHCCCC
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=2.6e-26  Score=202.47  Aligned_cols=144  Identities=24%  Similarity=0.385  Sum_probs=123.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   .++.  .|+..|.+++|||+++++|+|.... ..||++||+.|+|.|+++....    ++..+..+.
T Consensus       730 iKvl~~~t~~~~s~e~L--deAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~----~igsq~lLn  802 (1177)
T KOG1025|consen  730 IKVLIEFTSPKASIELL--DEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRD----NIGSQDLLN  802 (1177)
T ss_pred             EEEeeccCCchhhHHHH--HHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhc----cccHHHHHH
Confidence            7777665544   5666  9999999999999999999998765 8899999999999999987553    788889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      |..|||+||.|||   .++++||||..+|+|+.+...+                       .-.+.|+|-|.+....|+.
T Consensus       803 w~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~th  879 (1177)
T KOG1025|consen  803 WCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTH  879 (1177)
T ss_pred             HHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCc
Confidence            9999999999999   9999999999999999865432                       1234599999999999999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|||||||++||++| |.+|
T Consensus       880 qSDVWsfGVtiWElmTFGa~P  900 (1177)
T KOG1025|consen  880 QSDVWSFGVTIWELMTFGAKP  900 (1177)
T ss_pred             hhhhhhhhhhHHHHHhcCCCc
Confidence            9999999999999988 5554

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.92  E-value=4.1e-25  Score=190.70  Aligned_cols=141  Identities=28%  Similarity=0.407  Sum_probs=118.4

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+....  .+-.  +|+.++... +||||+++.+.+..+...|+|||.+.++-+.+.+....      .....+..|+
T Consensus       352 vkii~~~~--~~~~--~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~------~~~~e~~~w~  421 (612)
T KOG0603|consen  352 VKIISKRA--DDNQ--DEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKP------EFCSEASQWA  421 (612)
T ss_pred             heeccccc--cccc--cccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcc------hhHHHHHHHH
Confidence            66665542  2233  778666666 99999999999999999999999999998888776542      2336777899


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceee-cCCCce------------------ecccCccccccccCCCCCchhhHHH
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKL------------------IGTFGFIAPECITTGNCNEKSDVYS  213 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~-~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~DvwS  213 (227)
                      .+++.++.|||   +++++||||||+|||+ ++.+.+                  +-|..|.|||++....|+..+|+||
T Consensus       422 ~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WS  498 (612)
T KOG0603|consen  422 AELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWS  498 (612)
T ss_pred             HHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHH
Confidence            99999999999   9999999999999999 465533                  3466799999999888999999999


Q ss_pred             HHHHHHHHHhCCCC
Q 040292          214 FGALLLELLTGKKG  227 (227)
Q Consensus       214 ~G~il~el~tg~~p  227 (227)
                      ||++||+|++|+.|
T Consensus       499 LGvlLy~ML~G~tp  512 (612)
T KOG0603|consen  499 LGVLLYEMLTGRTL  512 (612)
T ss_pred             HHHHHHHHHhCCCc
Confidence            99999999999986

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.92  E-value=3.8e-25  Score=181.65  Aligned_cols=144  Identities=22%  Similarity=0.294  Sum_probs=123.0

Q ss_pred             eEEEcCCCC------cccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLN------TEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~------~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++....      .+.+.  +|+.++.++ +||||+++++.+..+...++||||+++|+|.+++....     .+++.
T Consensus        33 vk~~~~~~~~~~~~~~~~~~--~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~  105 (288)
T cd05583          33 MKVLKKATIVQKAKTAEHTR--TERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQRE-----HFTES  105 (288)
T ss_pred             EEEEehHHHHhhhhHHHHHH--HHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcC-----CcCHH
Confidence            777653221      13456  899999999 69999999999998889999999999999999987543     57888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~  204 (227)
                      .+..++.|+++||.|||   +.+++|+||+|+||+++.++.+                      .|+..|+|||...+..
T Consensus       106 ~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  182 (288)
T cd05583         106 EVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGS  182 (288)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCC
Confidence            89999999999999999   9999999999999999876432                      3677899999987655


Q ss_pred             --CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 --CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 --~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        .+.++|+||||+++|+|++|..|
T Consensus       183 ~~~~~~~Dv~slG~il~el~tg~~p  207 (288)
T cd05583         183 GGHDKAVDWWSLGVLTFELLTGASP  207 (288)
T ss_pred             CCCcchhhhHHHHHHHHHHHhCCCC
Confidence              68899999999999999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=5.7e-25  Score=180.53  Aligned_cols=149  Identities=22%  Similarity=0.290  Sum_probs=118.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......   ..+.  +|+.++.++. ||||+++++++..++..+++|||+. +++.++...........+++..+.
T Consensus        34 iK~~~~~~~~~~~~~~~--~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~  110 (288)
T cd06616          34 VKRIRSTVDEKEQKRLL--MDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILG  110 (288)
T ss_pred             EEEehhccChHHHHHHH--HHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHH
Confidence            7877654332   3455  9999999995 9999999999999889999999986 465543321000001268889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC---CCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG---NCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~---~~~  206 (227)
                      .++.|++.||+|||+  ..+++||||||+||++++++.+                    .|++.|+|||.+...   .++
T Consensus       111 ~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (288)
T cd06616         111 KIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYD  188 (288)
T ss_pred             HHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCc
Confidence            999999999999993  3589999999999999876532                    367789999998766   588


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+|+++|+|++|+.|
T Consensus       189 ~~~Di~slG~il~el~~g~~p  209 (288)
T cd06616         189 VRSDVWSLGITLYEVATGKFP  209 (288)
T ss_pred             chhhhhHHHHHHHHHHhCCCC
Confidence            999999999999999999987

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.1e-25  Score=203.88  Aligned_cols=133  Identities=22%  Similarity=0.314  Sum_probs=121.9

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      -|.  .|-.+|.--+.+-|+.+.-+|.++..+|+|||||+||+|..++....     ++++.+++.++..|.-||+-+| 
T Consensus       121 ~F~--EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH-  192 (1317)
T KOG0612|consen  121 CFR--EERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLH-  192 (1317)
T ss_pred             HHH--HHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHH-
Confidence            455  78888998899999999999999999999999999999999998765     6899999999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCce----------------------ecccCcccccccc----C-CCCCchhhHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECIT----T-GNCNEKSDVYSFGAL  217 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~----~-~~~~~~~DvwS~G~i  217 (227)
                        +.++|||||||+|+|+|..|.+                      +|||-|.+||++.    + +.|++.+|.||+||+
T Consensus       193 --~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~  270 (1317)
T KOG0612|consen  193 --SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVF  270 (1317)
T ss_pred             --hccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHH
Confidence              9999999999999999987654                      7999999999984    2 468999999999999


Q ss_pred             HHHHHhCCCC
Q 040292          218 LLELLTGKKG  227 (227)
Q Consensus       218 l~el~tg~~p  227 (227)
                      +|||+.|..|
T Consensus       271 ~YEMlyG~TP  280 (1317)
T KOG0612|consen  271 MYEMLYGETP  280 (1317)
T ss_pred             HHHHHcCCCc
Confidence            9999999987

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.92  E-value=9.1e-25  Score=178.66  Aligned_cols=144  Identities=22%  Similarity=0.332  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+......    +.+.  +|+.++++++|||++++++++...  +..++|+||++ ++|.+++....    ..+++..
T Consensus        29 ~K~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~  101 (287)
T cd07840          29 LKKIRMENEKEGFPITAI--REIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDLTGLLDSPE----VKFTESQ  101 (287)
T ss_pred             EEEEecccccccchHHHH--HHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccHHHHHhccC----CCCCHHH
Confidence            8888765322    3455  899999999999999999999887  78999999997 58988887543    2688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccC-CC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~-~~  204 (227)
                      +..++.|++.||+|||   +.+++|+||+|+||++++++.+                      .++..|+|||.+.+ ..
T Consensus       102 ~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  178 (287)
T cd07840         102 IKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATR  178 (287)
T ss_pred             HHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEcccc
Confidence            9999999999999999   8999999999999999976543                      23567999998764 35


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||||+++|||++|+.|
T Consensus       179 ~~~~~Dv~slG~~l~el~t~~~p  201 (287)
T cd07840         179 YGPEVDMWSVGCILAELFLGKPI  201 (287)
T ss_pred             CChHHHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.92  E-value=1.9e-25  Score=179.73  Aligned_cols=148  Identities=24%  Similarity=0.360  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    .++.  +|+.++++++||||+++.+++......++|+||+++++|.+++..... ....+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~  106 (256)
T cd08530          30 LKEVDLGSMSQKEREDAV--NEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKK-KRKLIPEQEIW  106 (256)
T ss_pred             EEEEehhhccHHHHHHHH--HHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHh-hcCCCCHHHHH
Confidence            7777643222    3455  899999999999999999999999999999999999999998865221 11267888999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++.+                   .+++.|++||.+.+..++.++|
T Consensus       107 ~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D  183 (256)
T cd08530         107 RIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSD  183 (256)
T ss_pred             HHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhh
Confidence            99999999999999   9999999999999999876532                   3677899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||+|+++|+|++|+.|
T Consensus       184 ~~slG~~~~~l~~g~~p  200 (256)
T cd08530         184 IWSLGCLLYEMATFAPP  200 (256)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999976

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=6.3e-25  Score=181.34  Aligned_cols=144  Identities=22%  Similarity=0.294  Sum_probs=118.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC----------cceeEeecccCCChhhhhcCCCCCC
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE----------VPILVFEFVACGTLADRIHDPNGSQ  139 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----------~~~lV~E~~~~gsL~~~l~~~~~~~  139 (227)
                      ||.++.....    ..+.  +|+.++++++||||+++++++....          ..++|+||+++ ++.+.+....   
T Consensus        37 iK~~~~~~~~~~~~~~~~--~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~---  110 (302)
T cd07864          37 LKKVRLDNEKEGFPITAI--REIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGL---  110 (302)
T ss_pred             EEEEeecccccCchHHHH--HHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCC---
Confidence            7877654322    3444  8999999999999999999987654          68899999985 7777776532   


Q ss_pred             CcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCcccc
Q 040292          140 LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAP  197 (227)
Q Consensus       140 ~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aP  197 (227)
                       ..+++..+..++.|++.||.|||   +.+++|+||+|+||++++++.+                      .++..|+||
T Consensus       111 -~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~P  186 (302)
T cd07864         111 -VHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPP  186 (302)
T ss_pred             -CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccCh
Confidence             26889999999999999999999   9999999999999999876533                      235569999


Q ss_pred             ccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          198 ECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       198 E~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |.+... .++.++|+|||||++|+|++|++|
T Consensus       187 E~~~~~~~~~~~~Di~slG~~~~el~~g~~~  217 (302)
T cd07864         187 ELLLGEERYGPAIDVWSCGCILGELFTKKPI  217 (302)
T ss_pred             HHhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            988643 478899999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.92  E-value=1.4e-24  Score=174.55  Aligned_cols=148  Identities=30%  Similarity=0.447  Sum_probs=127.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|++++++++|||++++.+.+..++..++|+||+++++|.+++...... ...+++..+.
T Consensus        30 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~  106 (258)
T cd08215          30 LKEIDLSNMSEKEREDAL--NEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKE-GKPFPEEQIL  106 (258)
T ss_pred             EEEeecccCChHHHHHHH--HHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhcc-CCCcCHHHHH
Confidence            7777654332    3455  9999999999999999999999999999999999999999998764211 1268899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.+++.||.|||   +.+++|+||+|+|+++++++.+                     .|++.|+|||......++.+
T Consensus       107 ~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~  183 (258)
T cd08215         107 DWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYK  183 (258)
T ss_pred             HHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCcc
Confidence            99999999999999   8999999999999999875432                     35677999999988888999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+|+++++|++|+.|
T Consensus       184 ~Dv~slG~~~~~l~~g~~p  202 (258)
T cd08215         184 SDIWSLGCVLYELCTLKHP  202 (258)
T ss_pred             ccHHHHHHHHHHHHcCCCC
Confidence            9999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.92  E-value=6.6e-25  Score=189.00  Aligned_cols=168  Identities=24%  Similarity=0.391  Sum_probs=135.4

Q ss_pred             ccHHHHHHhhcCCCCCCeeecCC---C-----eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCccee
Q 040292           50 FIALELEGATNNYDPGKGFLQDH---P-----ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPIL  118 (227)
Q Consensus        50 ~~~~~l~~~~~~f~~~~~~~~~~---~-----vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~l  118 (227)
                      ++...+.+.........|++.+-   .     ||..+.+...   +.|.  .|..+|++++|||||+++|+|.+ .+.|+
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekfl--qEa~iMrnfdHphIikLIGv~~e-~P~Wi  467 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFL--QEASIMRNFDHPHIIKLIGVCVE-QPMWI  467 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHH--HHHHHHHhCCCcchhheeeeeec-cceeE
Confidence            45555554443333344777433   2     8888765433   5677  99999999999999999999975 57899


Q ss_pred             EeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------
Q 040292          119 VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------  188 (227)
Q Consensus       119 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------  188 (227)
                      |||.++-|.|..++..+..    .++......++.|+..+|.|||   +.+++||||..+|||+.+..-+          
T Consensus       468 vmEL~~~GELr~yLq~nk~----sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~  540 (974)
T KOG4257|consen  468 VMELAPLGELREYLQQNKD----SLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRY  540 (974)
T ss_pred             EEecccchhHHHHHHhccc----cchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhh
Confidence            9999999999999987653    6778888899999999999999   9999999999999999875422          


Q ss_pred             ------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 ------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 ------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                                  .-..-|||||.+....++..+|||-|||++||+++ |.+|
T Consensus       541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkP  592 (974)
T KOG4257|consen  541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKP  592 (974)
T ss_pred             ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCc
Confidence                        12335999999999999999999999999999865 6665

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.92  E-value=8.3e-25  Score=183.80  Aligned_cols=142  Identities=22%  Similarity=0.313  Sum_probs=117.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......   ..+.  +|+.++++++||||+++++++....     ..++|+||+. ++|.+++...      .+++
T Consensus        35 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~------~l~~  105 (336)
T cd07849          35 IKKISPFEHQTFCQRTL--REIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TDLYKLIKTQ------HLSN  105 (336)
T ss_pred             EEEecccccchhHHHHH--HHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cCHHHHHhcC------CCCH
Confidence            7877643222   3455  8999999999999999999876543     4789999997 5888877542      6888


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCcccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~  201 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||++++++.+                        .|++.|+|||.+.
T Consensus       106 ~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (336)
T cd07849         106 DHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIML  182 (336)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhh
Confidence            999999999999999999   9999999999999999876432                        3567799999875


Q ss_pred             C-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 T-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      + ..++.++|+||+|+++|+|++|++|
T Consensus       183 ~~~~~~~~~DvwslGvil~el~~G~~~  209 (336)
T cd07849         183 NSKGYTKAIDIWSVGCILAEMLSNRPL  209 (336)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            5 4578999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=194.22  Aligned_cols=143  Identities=23%  Similarity=0.446  Sum_probs=124.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   ++|.  +|+.+|-+|+|||+++|||+..+ ....+|+|.++.|||.+.|++...   ..+.......
T Consensus       143 VKclr~d~l~~~mddfl--rEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~---~~llv~~Lcd  216 (1039)
T KOG0199|consen  143 VKCLRDDSLNAIMDDFL--REASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKK---AILLVSRLCD  216 (1039)
T ss_pred             EEeccCCccchhHHHHH--HHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccc---cceeHHHHHH
Confidence            8888876544   6888  99999999999999999999987 778899999999999999987221   2677888899


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|||.|+.||.   .++++||||..+|+++.....+                        .-.+.|.|||.+...+++
T Consensus       217 ya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFS  293 (1039)
T KOG0199|consen  217 YAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFS  293 (1039)
T ss_pred             HHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcccccc
Confidence            9999999999999   9999999999999998764332                        123459999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCC
Q 040292          207 EKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~  225 (227)
                      .++|||+|||++|||+|+.
T Consensus       294 haSDvWmyGVTiWEMFtyG  312 (1039)
T KOG0199|consen  294 HASDVWMYGVTIWEMFTYG  312 (1039)
T ss_pred             ccchhhhhhhhHHhhhccC
Confidence            9999999999999999853

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.92  E-value=7.5e-25  Score=178.94  Aligned_cols=144  Identities=24%  Similarity=0.332  Sum_probs=123.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    ..+.  +|+.++++++||||+++++++..++..++|+||++ +++.+++.....    ++++..+.
T Consensus        29 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~l~~~~~----~~~~~~~~  101 (283)
T cd05118          29 IKKIKLRFESEGIPKTAL--REIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TDLYKLIKDRQR----GLPESLIK  101 (283)
T ss_pred             EEEeccccccchhHHHHH--HHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-CCHHHHHHhhcc----cCCHHHHH
Confidence            7777654332    3455  89999999999999999999999999999999997 488888876432    68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++.+                     .++..|+|||.+... .++.
T Consensus       102 ~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  178 (283)
T cd05118         102 SYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYST  178 (283)
T ss_pred             HHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCc
Confidence            99999999999999   9999999999999999975532                     255679999998776 6889


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+|+++|+|+||+.|
T Consensus       179 ~~Di~slG~~l~~l~tg~~~  198 (283)
T cd05118         179 PVDIWSVGCIFAELLSRRPL  198 (283)
T ss_pred             hhHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999865

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.92  E-value=3.6e-25  Score=185.24  Aligned_cols=143  Identities=26%  Similarity=0.394  Sum_probs=122.9

Q ss_pred             eEEEcCCCC----cccccchhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLN----TEEYYCFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.+.....    .+.+.  +|+.++++++||||+++.+++....     ..|+||||++ ++|.+++....     +++
T Consensus        30 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~-----~l~  101 (330)
T cd07834          30 IKKISNVFDDLIDAKRIL--REIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQ-----PLT  101 (330)
T ss_pred             EEeeccccccchhhhhHH--HHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCC-----CCC
Confidence            777765432    24566  9999999999999999999988765     7899999997 58988887543     688


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECI  200 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~  200 (227)
                      +..+..++.|++.||.|||   +.+++|+||||+||+++.++.+                        .+++.|+|||.+
T Consensus       102 ~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  178 (330)
T cd07834         102 DDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELL  178 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceee
Confidence            9999999999999999999   9999999999999999876533                        246679999999


Q ss_pred             cCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+. .++.++|+||+|+++|+|++|++|
T Consensus       179 ~~~~~~~~~sDi~slG~il~~l~~g~~p  206 (330)
T cd07834         179 LSSSRYTKAIDIWSVGCIFAELLTRKPL  206 (330)
T ss_pred             ecccCCCcchhHHHHHHHHHHHHcCCCC
Confidence            877 789999999999999999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=3.8e-25  Score=180.95  Aligned_cols=147  Identities=23%  Similarity=0.377  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||++...... ++....+|+..+++++ |||++++++++..++..++||||+ +|+|.+++.....   ..+++..+..+
T Consensus        29 ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~---~~~~~~~~~~~  104 (283)
T cd07830          29 IKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKG---KPFSESVIRSI  104 (283)
T ss_pred             EEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhccc---ccCCHHHHHHH
Confidence            7877654332 2222237999999998 999999999999999999999999 7899998875431   25789999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC-CCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT-GNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~-~~~~~~~D  210 (227)
                      +.|++.+|.|||   +++++|+||+|+||++++++.+                    .++..|+|||.+.. ..++.++|
T Consensus       105 ~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~D  181 (283)
T cd07830         105 IYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVD  181 (283)
T ss_pred             HHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccc
Confidence            999999999999   8999999999999999976533                    35677999998854 45789999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||||+++++|++|++|
T Consensus       182 i~s~G~~l~el~~g~~~  198 (283)
T cd07830         182 IWALGCIMAELYTLRPL  198 (283)
T ss_pred             hhhHHHHHHHHHhCCCc
Confidence            99999999999999865

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.92  E-value=6.2e-25  Score=184.41  Aligned_cols=143  Identities=20%  Similarity=0.354  Sum_probs=119.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      +|.+......    +.+.  +|+.+|++++||||+++++++..    ....++|+||+. ++|.+++....     .+++
T Consensus        35 lK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----~~~~  106 (334)
T cd07855          35 IKKIPHAFDVPTLAKRTL--RELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQ-----PLTE  106 (334)
T ss_pred             EEEeccccccccchHHHH--HHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCC-----CCCH
Confidence            7877654322    3444  89999999999999999998763    345789999996 68999887543     5889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECI  200 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~  200 (227)
                      ..+..++.|++.||.|||   +++++||||||+||++++++.+                         .++..|+|||.+
T Consensus       107 ~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~  183 (334)
T cd07855         107 EHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELL  183 (334)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHh
Confidence            999999999999999999   8999999999999999886532                         356779999988


Q ss_pred             cC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .. ..++.++|+||||+++|+|++|+.|
T Consensus       184 ~~~~~~~~~~Di~slG~~l~el~~g~~p  211 (334)
T cd07855         184 LSLPEYTTAIDMWSVGCIFAEMLGRRQL  211 (334)
T ss_pred             cCCcccccccchHHHHHHHHHHHcCCCc
Confidence            65 4578999999999999999999876

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3.4e-24  Score=180.63  Aligned_cols=141  Identities=24%  Similarity=0.407  Sum_probs=116.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++....      ..++|+||+. .+|..+...       .+
T Consensus        45 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~~  114 (342)
T cd07879          45 IKKLSRPFQSEIFAKRAY--RELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMGH-------PL  114 (342)
T ss_pred             EEEecCccccccchhHHH--HHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHcC-------CC
Confidence            7777643222    2345  8999999999999999999987543      3589999996 477766532       57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||+|||   +.+++||||+|+||+++.++.+                  .++..|+|||.+.+ ..
T Consensus       115 ~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  191 (342)
T cd07879         115 SEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMH  191 (342)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccc
Confidence            88889999999999999999   8999999999999999876543                  35677999999876 45


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||||+++|||++|+.|
T Consensus       192 ~~~~~Dv~slGvil~el~~g~~p  214 (342)
T cd07879         192 YNQTVDIWSVGCIMAEMLTGKTL  214 (342)
T ss_pred             cCchHHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999876

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.91  E-value=9.1e-25  Score=178.35  Aligned_cols=144  Identities=23%  Similarity=0.373  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|+.++++++|+|++++++++...+..++|+||++ ++|.+++....    ..+++..+.
T Consensus        29 iK~~~~~~~~~~~~~~~~--~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~----~~~~~~~~~  101 (282)
T cd07829          29 LKKIRLDNEEEGIPSTAL--REISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRP----GPLSPNLIK  101 (282)
T ss_pred             EEEeccccccccccHHHH--HHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhc----cCCCHHHHH
Confidence            7777754322    3455  89999999999999999999999999999999997 59999997653    168899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||.|||   +.+++|+||+|+||++++++.+                     .++..|+|||.+... .++.
T Consensus       102 ~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  178 (282)
T cd07829         102 SIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYST  178 (282)
T ss_pred             HHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCc
Confidence            99999999999999   8999999999999999886543                     234569999998766 6889


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++||+++|++|
T Consensus       179 ~~Dv~slG~~l~~l~~~~~~  198 (282)
T cd07829         179 AVDIWSVGCIFAEMITGKPL  198 (282)
T ss_pred             cccHHHHHHHHHHHHhCCCC
Confidence            99999999999999999765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-24  Score=195.53  Aligned_cols=146  Identities=26%  Similarity=0.449  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCC---------CCCC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPN---------GSQL  140 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~---------~~~~  140 (227)
                      ||+++.....   +.+.  .|+++|+.+ .||||+.++|+|.+.+..++|+||+.+|+|.+++....         ....
T Consensus       333 VK~~k~~~~~~~~~~~~--~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~  410 (609)
T KOG0200|consen  333 VKMLKENASSSEKKDLM--SELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPN  410 (609)
T ss_pred             EEecccccCcHHHHHHH--HHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCcc
Confidence            8888766554   4666  999999999 79999999999999999999999999999999998765         1111


Q ss_pred             --cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------e---c--ccCc
Q 040292          141 --EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------I---G--TFGF  194 (227)
Q Consensus       141 --~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~---g--~~~y  194 (227)
                        ..++..+.+.++.|||.|++||+   +.+++||||..+||++..+..+                   .   +  ...|
T Consensus       411 ~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kW  487 (609)
T KOG0200|consen  411 ERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKW  487 (609)
T ss_pred             ccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceee
Confidence              13888899999999999999999   9999999999999999886433                   1   1  2349


Q ss_pred             cccccccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          195 IAPECITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       195 ~aPE~~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                      ||||.+....|+.++||||||++|||++|-
T Consensus       488 mApEsl~~~~ft~kSDVWSfGI~L~EifsL  517 (609)
T KOG0200|consen  488 MAPESLFDRVFTSKSDVWSFGILLWEIFTL  517 (609)
T ss_pred             cCHHHhccCcccccchhhHHHHHHHHHhhC
Confidence            999999998999999999999999999883

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3e-24  Score=181.21  Aligned_cols=142  Identities=23%  Similarity=0.404  Sum_probs=117.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||++......    +.+.  +|+.++++++||||+++++++...      ...+++++++ +++|.+++...      .+
T Consensus        47 iK~~~~~~~~~~~~~~~~--~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~------~l  117 (345)
T cd07877          47 VKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ------KL  117 (345)
T ss_pred             EEEecCcchhhHHHHHHH--HHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC------CC
Confidence            7777643221    3455  899999999999999999988643      2367888887 78998887642      57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||+|||   +.+++||||||+||++++++.+                  .++..|+|||.+.+ ..
T Consensus       118 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (345)
T cd07877         118 TDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH  194 (345)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccC
Confidence            88999999999999999999   9999999999999999887643                  46778999998866 45


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+|||||++|+|++|+.|
T Consensus       195 ~~~~~DvwslG~il~el~~g~~p  217 (345)
T cd07877         195 YNQTVDIWSVGCIMAELLTGRTL  217 (345)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Confidence            78899999999999999999876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.91  E-value=4.1e-24  Score=179.19  Aligned_cols=142  Identities=24%  Similarity=0.378  Sum_probs=118.0

Q ss_pred             eEEEcCCCC----cccccchhHHHHHhcCCCcccceeEEEEee-CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN----TEEYYCFNCIAFASQMSHKNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....    .+.+.  +|+.++++++||||+++.+++.. ....++|+||+ +++|.+++...      ++++...
T Consensus        40 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~------~~~~~~~  110 (328)
T cd07856          40 IKKIMKPFSTPVLAKRTY--RELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR------PLEKQFI  110 (328)
T ss_pred             EEEecccccccchhHHHH--HHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-ccCHHHHHhcC------CCCHHHH
Confidence            777653222    24566  89999999999999999998875 45788999999 56898887642      5677888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CCCCchh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GNCNEKS  209 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~~~~~~  209 (227)
                      ..++.|++.||.|||   +.+++|+||+|+|+++++++.+                  .++..|+|||.+.+ ..++.++
T Consensus       111 ~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  187 (328)
T cd07856         111 QYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEV  187 (328)
T ss_pred             HHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHH
Confidence            889999999999999   9999999999999999876532                  35677999998866 4588999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||||+++|+|++|++|
T Consensus       188 Dv~slG~il~el~tg~~~  205 (328)
T cd07856         188 DIWSAGCIFAEMLEGKPL  205 (328)
T ss_pred             HHHHHHHHHHHHHhCCCC
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.7e-24  Score=192.09  Aligned_cols=146  Identities=25%  Similarity=0.397  Sum_probs=127.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEEEee-----CCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGCCLE-----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.+...... ++..  .|..+|+.+ .|||++.++|++..     ++.+|||||||.+||..|+++...+   ..+.|.
T Consensus        49 ~kI~~~~~d~deEiE--~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g---~rl~E~  123 (953)
T KOG0587|consen   49 IKIMDPTEDEEEEIE--LEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKG---NRLKEE  123 (953)
T ss_pred             eEeecCCccccHHHH--HHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcc---cchhhH
Confidence            7777765444 5666  788889888 89999999999875     4579999999999999999987652   378999


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC--
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG--  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~--  203 (227)
                      .+..|++.++.|+.+||   .+.++|||+|-.|||++.++.+                     +||+.|||||++...  
T Consensus       124 ~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~  200 (953)
T KOG0587|consen  124 WIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDES  200 (953)
T ss_pred             HHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccC
Confidence            99999999999999999   9999999999999999887643                     799999999999643  


Q ss_pred             ---CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 ---NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ---~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                         .|+.++|+||+|++..||..|.+|
T Consensus       201 ~d~tyd~R~D~WsLGITaIEladG~PP  227 (953)
T KOG0587|consen  201 PDATYDYRSDLWSLGITAIEMAEGAPP  227 (953)
T ss_pred             CCCCcccccchhhccceeehhcCCCCC
Confidence               477899999999999999999987

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.91  E-value=3.5e-24  Score=180.62  Aligned_cols=142  Identities=23%  Similarity=0.363  Sum_probs=119.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++....      ..++|+||+ +++|.+++...      .+
T Consensus        45 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~------~l  115 (343)
T cd07880          45 IKKLYRPFQSELFAKRAY--RELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHE------KL  115 (343)
T ss_pred             EEEecccccchHHHHHHH--HHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhcC------CC
Confidence            7877543222    3455  8999999999999999999987654      358999999 67998888642      57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||.|||   +.+++||||+|+||++++++.+                  .+++.|+|||.+.+ ..
T Consensus       116 ~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (343)
T cd07880         116 SEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMH  192 (343)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcccCHHHHhCCCC
Confidence            88999999999999999999   9999999999999999876543                  35778999999876 35


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||+|+++|++++|+.|
T Consensus       193 ~~~~~Di~slG~ll~~l~~g~~p  215 (343)
T cd07880         193 YTQTVDIWSVGCIMAEMLTGKPL  215 (343)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999876

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.91  E-value=1.3e-24  Score=179.37  Aligned_cols=144  Identities=22%  Similarity=0.358  Sum_probs=117.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....   .++.  +|+.++.+. .||||++++++|..+...+++|||+. +++.+++.....    ++++..+.
T Consensus        45 vK~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~----~l~~~~~~  117 (296)
T cd06618          45 VKQMRRTGNKEENKRIL--MDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQG----PIPEDILG  117 (296)
T ss_pred             EEEEeccCChHHHHHHH--HHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcC----CCCHHHHH
Confidence            8888654332   2344  788767666 59999999999999999999999985 577776654332    68889999


Q ss_pred             HHHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCC----
Q 040292          150 KVAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGN----  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~----  204 (227)
                      .++.|++.|+.|||   + .+++||||+|+||++++++.+                    .++..|+|||.+....    
T Consensus       118 ~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  194 (296)
T cd06618         118 KMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPK  194 (296)
T ss_pred             HHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccc
Confidence            99999999999999   6 589999999999999876533                    2456799999987553    


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||||+++|+|++|+.|
T Consensus       195 ~~~~~Di~slG~il~el~~g~~p  217 (296)
T cd06618         195 YDIRADVWSLGISLVELATGQFP  217 (296)
T ss_pred             cccchhHHHHHHHHHHHHhCCCC
Confidence            78899999999999999999987

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.91  E-value=3e-24  Score=177.78  Aligned_cols=144  Identities=16%  Similarity=0.283  Sum_probs=117.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC--------cceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE--------VPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--------~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++....        ..++|+||+. +++.+.+.....    
T Consensus        38 ik~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~~~----  110 (311)
T cd07866          38 LKKILMHNEKDGFPITAL--REIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMD-HDLSGLLENPSV----  110 (311)
T ss_pred             EEEEEeccCCCCcchhHH--HHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCC-cCHHHHHhcccc----
Confidence            7777544322    2345  8999999999999999999876543        3589999996 577777765332    


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------------------e
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------------------I  189 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------------------~  189 (227)
                      .+++..+..++.|+++||.|||   +.+++|+||+|+||++++++.+                                .
T Consensus       111 ~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (311)
T cd07866         111 KLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLV  187 (311)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccce
Confidence            6889999999999999999999   9999999999999999876532                                2


Q ss_pred             cccCccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          190 GTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       190 g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +++.|+|||.+.+. .++.++|+||||+++|||++|++|
T Consensus       188 ~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~  226 (311)
T cd07866         188 VTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPI  226 (311)
T ss_pred             eccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCC
Confidence            35669999988654 478999999999999999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.91  E-value=7.9e-25  Score=177.05  Aligned_cols=134  Identities=22%  Similarity=0.371  Sum_probs=116.7

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+.++++++||||+++++++.+....++|+||+++++|.+++....... ..+++..+..++.|++.||.|||   +.+
T Consensus        51 ~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH---~~~  126 (260)
T cd08222          51 QEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTG-KTLSENQVCEWFIQLLLGVHYMH---QRR  126 (260)
T ss_pred             HHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHH---HcC
Confidence            89999999999999999999999889999999999999998886422111 26889999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCc--------------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          170 IVFRDIKPFTTHVNDNDK--------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~--------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+|+|++++++..                    ..|++.|+|||......++.++|+||||+++|+|++|..|
T Consensus       127 i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~  204 (260)
T cd08222         127 ILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHA  204 (260)
T ss_pred             ccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999999999999975321                    1356779999999877888999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.91  E-value=6.3e-25  Score=178.99  Aligned_cols=144  Identities=24%  Similarity=0.373  Sum_probs=125.0

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+.....     .+.+.  +|+.++.+++ ||||+++++++..++..++|||++++++|.+++....     .+++..
T Consensus        31 ik~~~~~~~~~~~~~~~~~--~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~  103 (280)
T cd05581          31 IKILDKRQLIKEKKVKYVK--IEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYG-----SLDEKC  103 (280)
T ss_pred             EEEechHhccchHHHHHHH--HHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcC-----CCCHHH
Confidence            677654322     13455  8999999998 9999999999999999999999999999999997654     689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------------------------
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------------------------  188 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------------------------  188 (227)
                      +..++.|++.||.|||   +.+++|+||+|+||+++.++.+                                       
T Consensus       104 ~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (280)
T cd05581         104 TRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFA  180 (280)
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccc
Confidence            9999999999999999   9999999999999999875432                                       


Q ss_pred             --ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 --IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 --~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        .++..|++||.......+.++|+||+|++++++++|+.|
T Consensus       181 ~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p  221 (280)
T cd05581         181 SFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP  221 (280)
T ss_pred             cccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCC
Confidence              245779999999888889999999999999999999876

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.91  E-value=6.3e-24  Score=173.79  Aligned_cols=145  Identities=24%  Similarity=0.365  Sum_probs=120.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC---CCcccceeEEEEeeCCc-----ceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM---SHKNILKFVGCCLETEV-----PILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~-----~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.++.....    ..+.  +|+.++.++   +|||++++++++...+.     .+++|||+. ++|.+++.....   .
T Consensus        29 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~---~  102 (287)
T cd07838          29 LKKVRVPLSEEGIPLSTL--REIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVD-QDLATYLSKCPK---P  102 (287)
T ss_pred             EEEeccccccchhhhhHH--HHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcc-cCHHHHHHHccC---C
Confidence            8887643322    2344  788777665   69999999999988776     899999997 589888865321   1


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~  201 (227)
                      .+++..+..++.|++.||.|||   +.+++|+||+|+|++++.++.+                    .++..|+|||.+.
T Consensus       103 ~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~  179 (287)
T cd07838         103 GLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLL  179 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccccChHHhc
Confidence            5789999999999999999999   8999999999999999887643                    2566799999998


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ...++.++|+||||+++|+|++|++|
T Consensus       180 ~~~~~~~~Di~s~G~~l~~l~~~~~~  205 (287)
T cd07838         180 QSSYATPVDMWSVGCIFAELFRRRPL  205 (287)
T ss_pred             cCCCCCcchhhhHHHHHHHHHhCCCc
Confidence            88889999999999999999999765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.91  E-value=2e-24  Score=161.10  Aligned_cols=146  Identities=21%  Similarity=0.340  Sum_probs=125.9

Q ss_pred             eEEEcCCCCcc--cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTE--EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~--~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|+.+-+...+  .-.+++||.+|+.+.|+|||+++++...+...-||+|||. .+|..+..+.++    .++.+....+
T Consensus        32 lkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkkyfdslng----~~d~~~~rsf  106 (292)
T KOG0662|consen   32 LKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSLNG----DLDPEIVRSF  106 (292)
T ss_pred             EEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHHHHHhcCC----cCCHHHHHHH
Confidence            67776554442  2234499999999999999999999999999999999996 689888887765    7888999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~~~  209 (227)
                      +.|+++||.++|   ++++.|||+||+|.+++.+|.+                     +-|.+|.+|.++.+.+ |+...
T Consensus       107 mlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsi  183 (292)
T KOG0662|consen  107 MLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI  183 (292)
T ss_pred             HHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccch
Confidence            999999999999   9999999999999999998764                     4677899999998876 88999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||.||++.|+.....|
T Consensus       184 dmwsagcifaelanagrp  201 (292)
T KOG0662|consen  184 DMWSAGCIFAELANAGRP  201 (292)
T ss_pred             HhhhcchHHHHHhhcCCC
Confidence            999999999999876554

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4.3e-25  Score=186.27  Aligned_cols=130  Identities=23%  Similarity=0.339  Sum_probs=123.9

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      .|-.+|...+.|.||++|-.|.+....|+.||-|-||.|...+..++     .++...+..++..+++|++|||   +++
T Consensus       469 sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg-----~Fdd~tarF~~acv~EAfeYLH---~k~  540 (732)
T KOG0614|consen  469 SERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRG-----SFDDYTARFYVACVLEAFEYLH---RKG  540 (732)
T ss_pred             hHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcC-----CcccchhhhhHHHHHHHHHHHH---hcC
Confidence            89999999999999999999999999999999999999999999876     7888889999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |+.|||||+|.+++.+|.+                    +|||.|.|||.+.+..++..+|.||+|+++||+++|.+|
T Consensus       541 iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pP  618 (732)
T KOG0614|consen  541 IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPP  618 (732)
T ss_pred             ceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCC
Confidence            9999999999999988754                    899999999999999999999999999999999999998

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.91  E-value=4.2e-24  Score=179.68  Aligned_cols=143  Identities=22%  Similarity=0.341  Sum_probs=118.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.+......    ..+.  +|+.+++.++||||+++++++....     ..++|+||+. ++|.+++....     +++
T Consensus        35 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-----~l~  106 (337)
T cd07858          35 IKKIANAFDNRIDAKRTL--REIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQ-----TLS  106 (337)
T ss_pred             EEEecccccccchhHHHH--HHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCC-----CCC
Confidence            7777643211    2344  8999999999999999999886542     4799999996 78988887543     688


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-  202 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-  202 (227)
                      +..+..++.|++.||.|||   +++++||||||+||+++.++.+                     .++..|+|||.+.. 
T Consensus       107 ~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (337)
T cd07858         107 DDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC  183 (337)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcccccccccccCccChHHHhcC
Confidence            9999999999999999999   9999999999999999876532                     35667999998865 


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..++.++|+|||||++|+|++|++|
T Consensus       184 ~~~~~~~DiwslG~il~~l~~g~~p  208 (337)
T cd07858         184 SEYTTAIDVWSVGCIFAELLGRKPL  208 (337)
T ss_pred             CCCCCcccHHHHHHHHHHHHcCCCC
Confidence            4588999999999999999999875

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.90  E-value=1.2e-23  Score=176.46  Aligned_cols=143  Identities=24%  Similarity=0.323  Sum_probs=117.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC-CCcccceeEEEEeeC----CcceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM-SHKNILKFVGCCLET----EVPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.+......    +.+.  +|+.++.++ +||||+++++.+...    ...++++||+. ++|.+++....     .++
T Consensus        32 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~-----~~~  103 (332)
T cd07857          32 IKKITNVFSKKILAKRAL--RELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQ-----PLT  103 (332)
T ss_pred             EEEeccccccchhHHHHH--HHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCC-----CCC
Confidence            7776543222    3455  899999999 699999999976543    34678899986 68999886543     688


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCcccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPEC  199 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~  199 (227)
                      +..+..++.|++.||.|||   +.+++||||||+||++++++.+                         .|++.|+|||.
T Consensus       104 ~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~  180 (332)
T cd07857         104 DAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEI  180 (332)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHH
Confidence            9999999999999999999   9999999999999999875432                         46778999998


Q ss_pred             ccC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..+ ..++.++|+||+|+++|++++|++|
T Consensus       181 ~~~~~~~~~~~Di~slGv~l~~l~~g~~p  209 (332)
T cd07857         181 MLSFQSYTKAIDVWSVGCILAELLGRKPV  209 (332)
T ss_pred             HhCCCCCCcHHHHHHHHHHHHHHHhCCcC
Confidence            765 4578999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=3e-24  Score=179.01  Aligned_cols=134  Identities=25%  Similarity=0.411  Sum_probs=117.5

Q ss_pred             chhHHHHHhcCCCcccceeEEEEe-eCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292           88 CFNCIAFASQMSHKNILKFVGCCL-ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus        88 ~~~Ei~~l~~l~H~niv~l~g~~~-~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                      +++|..+.+.|+||.||++|+++. +.+.+|-|+|||+|.+|.-+|....     .++++++..|+.||+.||.||..- 
T Consensus       514 AcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk-----lmSEKEARSIiMQiVnAL~YLNEi-  587 (775)
T KOG1151|consen  514 ACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK-----LMSEKEARSIIMQIVNALKYLNEI-  587 (775)
T ss_pred             HHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhh-----hhhHHHHHHHHHHHHHHHHHHhcc-
Confidence            559999999999999999999986 4567899999999999988887654     789999999999999999999844 


Q ss_pred             CCCeEEecCCCCceeecCCCce-------------------------------ecccCccccccccCC----CCCchhhH
Q 040292          167 SRPIVFRDIKPFTTHVNDNDKL-------------------------------IGTFGFIAPECITTG----NCNEKSDV  211 (227)
Q Consensus       167 ~~~i~H~dlkp~nil~~~~~~~-------------------------------~g~~~y~aPE~~~~~----~~~~~~Dv  211 (227)
                      ..+|+|-||||.|||+.+...+                               .||.+|++||++.-+    +.+.|+||
T Consensus       588 kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDV  667 (775)
T KOG1151|consen  588 KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDV  667 (775)
T ss_pred             CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceee
Confidence            7899999999999998754321                               589999999998543    47899999


Q ss_pred             HHHHHHHHHHHhCCCC
Q 040292          212 YSFGALLLELLTGKKG  227 (227)
Q Consensus       212 wS~G~il~el~tg~~p  227 (227)
                      ||.||++|..+.|++|
T Consensus       668 WSvGVIFyQClYGrKP  683 (775)
T KOG1151|consen  668 WSVGVIFYQCLYGRKP  683 (775)
T ss_pred             EeeehhhhhhhccCCC
Confidence            9999999999999988

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=170.56  Aligned_cols=147  Identities=20%  Similarity=0.337  Sum_probs=119.2

Q ss_pred             eEEEcCCCCccccc-chhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTEEYY-CFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~~~~-~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+....+.++.. ++..+.++..- ..|.||+.+|+|..+...++.||.|. .-+..++..-.    +++++...=.+
T Consensus       122 VK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ekLlkrik----~piPE~ilGk~  196 (391)
T KOG0983|consen  122 VKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAEKLLKRIK----GPIPERILGKM  196 (391)
T ss_pred             EEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHHHHHHHhc----CCchHHhhhhh
Confidence            99998887774332 23566655554 58999999999999999999999985 34444443322    27888777778


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC---CCCCch
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT---GNCNEK  208 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~---~~~~~~  208 (227)
                      ...+..||.||..  .++|+|||+||+|||+|+.|.+                    .|.+.|||||.+..   ..|+.+
T Consensus       197 tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiR  274 (391)
T KOG0983|consen  197 TVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIR  274 (391)
T ss_pred             HHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchh
Confidence            8889999999986  7799999999999999998765                    47889999999853   368999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||||+.++|++||+.|
T Consensus       275 aDVWSlGITlveLaTg~yP  293 (391)
T KOG0983|consen  275 ADVWSLGITLVELATGQYP  293 (391)
T ss_pred             hhhhhhccchhhhhcccCC
Confidence            9999999999999999987

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.90  E-value=5.4e-24  Score=179.38  Aligned_cols=142  Identities=22%  Similarity=0.352  Sum_probs=115.8

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeC--------------CcceeEeecccCCChhhhhcCCCC
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLET--------------EVPILVFEFVACGTLADRIHDPNG  137 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--------------~~~~lV~E~~~~gsL~~~l~~~~~  137 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++...              ...++|+||++ ++|.+++...  
T Consensus        35 iK~i~~~~~~~~~~~~--~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--  109 (342)
T cd07854          35 VKKIVLTDPQSVKHAL--REIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQG--  109 (342)
T ss_pred             EEEEecCCCchHHHHH--HHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcC--
Confidence            7777554333  3455  899999999999999999876543              34689999997 5898887532  


Q ss_pred             CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-e------------------------eccc
Q 040292          138 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-L------------------------IGTF  192 (227)
Q Consensus       138 ~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-~------------------------~g~~  192 (227)
                          .+++..+..++.|++.||.|||   +.+++||||||+|++++.++. +                        .++.
T Consensus       110 ----~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  182 (342)
T cd07854         110 ----PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTK  182 (342)
T ss_pred             ----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccc
Confidence                5788999999999999999999   899999999999999974321 1                        2456


Q ss_pred             CccccccccC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          193 GFIAPECITT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       193 ~y~aPE~~~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .|+|||.+.. ..++.++|+|||||++|+|++|+.|
T Consensus       183 ~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~p  218 (342)
T cd07854         183 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPL  218 (342)
T ss_pred             cccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCC
Confidence            7999998754 4578899999999999999999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.90  E-value=1.6e-23  Score=172.99  Aligned_cols=128  Identities=18%  Similarity=0.218  Sum_probs=104.3

Q ss_pred             HHHHHhcCCCcccceeEEEEeeCC----cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292           91 CIAFASQMSHKNILKFVGCCLETE----VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus        91 Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                      +...+..++|+|++++++++....    ..++++|++. .++.+.+....     +.++..+..++.|++.||+|||   
T Consensus        73 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH---  143 (294)
T PHA02882         73 LWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK-----CKNKKLIKNIMKDMLTTLEYIH---  143 (294)
T ss_pred             HHHHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhc-----cCCHHHHHHHHHHHHHHHHHHH---
Confidence            344566779999999999776543    2367788774 46666654322     3567778899999999999999   


Q ss_pred             CCCeEEecCCCCceeecCCCce----------------------------ecccCccccccccCCCCCchhhHHHHHHHH
Q 040292          167 SRPIVFRDIKPFTTHVNDNDKL----------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALL  218 (227)
Q Consensus       167 ~~~i~H~dlkp~nil~~~~~~~----------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il  218 (227)
                      +.+++||||||+||+++.++.+                            .||+.|+|||+..+..++.++|||||||++
T Consensus       144 ~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l  223 (294)
T PHA02882        144 EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCM  223 (294)
T ss_pred             hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHH
Confidence            9999999999999999764321                            478899999999988899999999999999


Q ss_pred             HHHHhCCCC
Q 040292          219 LELLTGKKG  227 (227)
Q Consensus       219 ~el~tg~~p  227 (227)
                      |||++|+.|
T Consensus       224 ~el~~g~~P  232 (294)
T PHA02882        224 LKWAGIKLP  232 (294)
T ss_pred             HHHHhCCCC
Confidence            999999987

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.90  E-value=9.8e-26  Score=176.86  Aligned_cols=160  Identities=19%  Similarity=0.267  Sum_probs=122.1

Q ss_pred             cCCCCCCeeec---CCC--eEEEcCCCCc---ccccchhHHHHH-hcCCCcccceeEEEEeeCCcceeEeecccCCChhh
Q 040292           60 NNYDPGKGFLQ---DHP--ISEFGDNLNT---EEYYCFNCIAFA-SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD  130 (227)
Q Consensus        60 ~~f~~~~~~~~---~~~--vK~~~~~~~~---~~~~~~~Ei~~l-~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~  130 (227)
                      +.|..++....   |..  ||+++.....   +++.  .|.+.. +.=+.||||++||.+..++..|+.||.|. .||..
T Consensus        75 G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll--~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDk  151 (361)
T KOG1006|consen   75 GAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLL--MEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDK  151 (361)
T ss_pred             CcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHH--HHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHH
Confidence            34555554332   222  9999876553   3455  888754 44589999999999999999999999996 56654


Q ss_pred             hhc---CCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------
Q 040292          131 RIH---DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------  188 (227)
Q Consensus       131 ~l~---~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------  188 (227)
                      +..   +-..   ..+++.-.-.+......||+||..  ...|+|||+||+|||++..|.+                   
T Consensus       152 lYk~vy~vq~---~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~  226 (361)
T KOG1006|consen  152 LYKRVYSVQK---SRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV  226 (361)
T ss_pred             HHHHHHHHHh---ccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence            332   1110   146676666677777899999986  6789999999999999988754                   


Q ss_pred             -ecccCccccccccCC--CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -IGTFGFIAPECITTG--NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -~g~~~y~aPE~~~~~--~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .|...|||||.+...  .|+.+|||||+|++++|+.||+-|
T Consensus       227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fP  268 (361)
T KOG1006|consen  227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFP  268 (361)
T ss_pred             ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCC
Confidence             477889999998543  489999999999999999999876

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.4e-24  Score=173.47  Aligned_cols=130  Identities=22%  Similarity=0.337  Sum_probs=121.6

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      .|-++|+..+||.+..+.-.|...+..|+||||+.||.|.-++....     .+++...+.+...|..||.|||   +++
T Consensus       217 TE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer-----~FsE~RtRFYGaEIvsAL~YLH---s~~  288 (516)
T KOG0690|consen  217 TENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRER-----VFSEDRTRFYGAEIVSALGYLH---SRN  288 (516)
T ss_pred             hHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhh-----cccchhhhhhhHHHHHHhhhhh---hCC
Confidence            67788999999999999888999999999999999999999887654     6889999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |+.||||-+|.++|.+|.+                     ||||.|+|||++....|+...|.|.+|+++|||++|+.|
T Consensus       289 ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLP  367 (516)
T KOG0690|consen  289 IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLP  367 (516)
T ss_pred             eeeeechhhhheeccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCc
Confidence            9999999999999998754                     799999999999999999999999999999999999987

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.90  E-value=1.4e-24  Score=184.00  Aligned_cols=159  Identities=20%  Similarity=0.300  Sum_probs=129.9

Q ss_pred             hcCCCCCCe-ee--cCCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChh
Q 040292           59 TNNYDPGKG-FL--QDHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLA  129 (227)
Q Consensus        59 ~~~f~~~~~-~~--~~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~  129 (227)
                      ++.|..++| +.  .|..  ||.+......    +.++  +|+.+|+++.||.||.+.-.|+..+..++|||.+. |+..
T Consensus       574 SGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR--~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GDML  650 (888)
T KOG4236|consen  574 SGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLR--NEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GDML  650 (888)
T ss_pred             CCcceeeecceecccCceeeeeeeecccCCCchHHHHH--HHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-chHH
Confidence            445655553 33  2333  8877654322    4677  99999999999999999999999999999999995 6776


Q ss_pred             hhhcC-CCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----------------------
Q 040292          130 DRIHD-PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----------------------  186 (227)
Q Consensus       130 ~~l~~-~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----------------------  186 (227)
                      +.+.+ ..+    .+++.....++.||+.||.|||   .++|+|.||||+|+|+.+..                      
T Consensus       651 EMILSsEkg----RL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR  723 (888)
T KOG4236|consen  651 EMILSSEKG----RLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR  723 (888)
T ss_pred             HHHHHhhcc----cchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh
Confidence            66643 332    6888888899999999999999   99999999999999998642                      


Q ss_pred             -ceecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          187 -KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       187 -~~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       +++|||.|+|||++.+..|+..-|+||.|+++|--++|.-|
T Consensus       724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFP  765 (888)
T KOG4236|consen  724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFP  765 (888)
T ss_pred             hhhcCCccccCHHHHhhccccccccceeeeEEEEEEeccccc
Confidence             23799999999999999999999999999999988887644

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.90  E-value=7.4e-24  Score=178.60  Aligned_cols=142  Identities=25%  Similarity=0.409  Sum_probs=118.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCc------ceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEV------PILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~------~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.++++++|||++++.+++...+.      .++|+||+ +++|.+++...      ++
T Consensus        45 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~------~l  115 (343)
T cd07851          45 IKKLSRPFQSAIHAKRTY--RELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQ------KL  115 (343)
T ss_pred             EEecccccchhhHHHHHH--HHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhcC------CC
Confidence            7776543221    3445  89999999999999999988766554      89999999 57999988752      68


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCC-C
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTG-N  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~-~  204 (227)
                      ++..+..++.|++.||.|||   +.+++|+||+|+||++++++.+                  .++..|+|||.+... .
T Consensus       116 ~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (343)
T cd07851         116 SDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH  192 (343)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccccCHHHHhCCCC
Confidence            89999999999999999999   9999999999999999876533                  356779999988653 5


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||+|+++|++++|+.|
T Consensus       193 ~~~~~DvwslGv~l~elltg~~p  215 (343)
T cd07851         193 YNQTVDIWSVGCIMAELLTGKTL  215 (343)
T ss_pred             CCchHhHHHHHHHHHHHHhCCCC
Confidence            78999999999999999999876

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.90  E-value=1.7e-23  Score=166.12  Aligned_cols=144  Identities=28%  Similarity=0.438  Sum_probs=126.9

Q ss_pred             eEEEcCCCC---cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLN---TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+.....   .+.+.  +|+..+++++|+|++++.+++......++++||+++++|.+++....     .+++..+..
T Consensus        19 ~k~~~~~~~~~~~~~~~--~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-----~~~~~~~~~   91 (244)
T smart00220       19 IKVIKKEKIKKKRERIL--REISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG-----RLSEDEARF   91 (244)
T ss_pred             EEEecccccccHHHHHH--HHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc-----CCCHHHHHH
Confidence            788766544   35666  99999999999999999999999999999999999999999987643     378889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.+++.++.+||   ..+++|+||+|+|+++++++.+                    .++..|++||......++.++|
T Consensus        92 ~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D  168 (244)
T smart00220       92 YARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVD  168 (244)
T ss_pred             HHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhh
Confidence            9999999999999   8899999999999999876433                    3567899999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||+|++++++++|..|
T Consensus       169 i~slG~~l~~l~~~~~p  185 (244)
T smart00220      169 VWSLGVILYELLTGKPP  185 (244)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999876

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=4.7e-24  Score=176.48  Aligned_cols=146  Identities=24%  Similarity=0.359  Sum_probs=125.8

Q ss_pred             eEEEcCCCCc--cccc-chhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT--EEYY-CFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~-~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.+-.-  ++.. ...|-++|.-. +-|.++++..+|..-+.+|+||||+.||+|..++...+     .+.+..+.
T Consensus       379 iKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~G-----kFKEp~Av  453 (683)
T KOG0696|consen  379 IKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-----KFKEPVAV  453 (683)
T ss_pred             hhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhc-----ccCCchhh
Confidence            7776655322  2222 12566666655 67889999999999999999999999999999998765     68888999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++..||-||-+||   +++|+.||||-+|++++.+|.+                     +|||.|+|||.+.+..|+..
T Consensus       454 FYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgks  530 (683)
T KOG0696|consen  454 FYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKS  530 (683)
T ss_pred             hhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccc
Confidence            99999999999999   9999999999999999987754                     79999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|.||||++||||+.|++|
T Consensus       531 vDWWa~GVLLyEmlaGQpP  549 (683)
T KOG0696|consen  531 VDWWAFGVLLYEMLAGQPP  549 (683)
T ss_pred             hhHHHHHHHHHHHHcCCCC
Confidence            9999999999999999998

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.89  E-value=8.3e-24  Score=169.59  Aligned_cols=125  Identities=26%  Similarity=0.351  Sum_probs=111.7

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhh
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH  163 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH  163 (227)
                      +|..++..++|+||++++.++....      +.|+|||+|. ++|...+..       .++......++.|++.|+.|||
T Consensus        64 rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lh  135 (369)
T KOG0665|consen   64 RELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILM-------ELDHETISYILYQMLCGIKHLH  135 (369)
T ss_pred             hhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999997543      5799999996 699888873       5677888899999999999999


Q ss_pred             hcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t  223 (227)
                         +.+|+||||||+||++..++..                    +.|..|.|||++.+..+...+||||.||++.||++
T Consensus       136 ---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~  212 (369)
T KOG0665|consen  136 ---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELIL  212 (369)
T ss_pred             ---hcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhh
Confidence               9999999999999999876543                    56778999999999889999999999999999999


Q ss_pred             CC
Q 040292          224 GK  225 (227)
Q Consensus       224 g~  225 (227)
                      |+
T Consensus       213 ~~  214 (369)
T KOG0665|consen  213 GT  214 (369)
T ss_pred             ce
Confidence            85

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.89  E-value=1.6e-23  Score=159.16  Aligned_cols=150  Identities=18%  Similarity=0.276  Sum_probs=120.3

Q ss_pred             eEEEcCCCCcc-cccchhHHHHHhc-CCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTE-EYYCFNCIAFASQ-MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~-~~~~~~Ei~~l~~-l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||++....+.+ +.+.++|+.+..+ ...|.+|.+||....+...++.||.|. .||..+-..--. ..+.+++.-.=.+
T Consensus        76 vKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~-~g~~ipE~vlGkI  153 (282)
T KOG0984|consen   76 VKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLK-KGGTIPEDVLGKI  153 (282)
T ss_pred             EeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHh-cCCcCchHHhhHh
Confidence            88888766552 2333488885544 489999999999999999999999996 577665432110 0126788888889


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC----CCCCc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT----GNCNE  207 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~----~~~~~  207 (227)
                      +..+..||.|||.  ...++|||+||+|||++.+|.+                    .|...|||||.+..    ..|+.
T Consensus       154 a~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~v  231 (282)
T KOG0984|consen  154 AVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSV  231 (282)
T ss_pred             HHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCccccee
Confidence            9999999999995  6689999999999999998865                    36678999998843    36899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+|+.+.||.+++.|
T Consensus       232 ksDvWSLGItmiElA~lr~P  251 (282)
T KOG0984|consen  232 KSDVWSLGITMIEMAILRFP  251 (282)
T ss_pred             ehhhhhhhhhhhhhhhcccc
Confidence            99999999999999999876

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.89  E-value=2.1e-24  Score=190.70  Aligned_cols=167  Identities=24%  Similarity=0.354  Sum_probs=131.7

Q ss_pred             ccHHHHH-HhhcCCCCCCeeecCCC--eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccC
Q 040292           50 FIALELE-GATNNYDPGKGFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVAC  125 (227)
Q Consensus        50 ~~~~~l~-~~~~~f~~~~~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~  125 (227)
                      |+.+|+. ..+++.....|+.+++.  ||++-.....   .+.+||..|..- .|||||++++.-.+....|+..|.|. 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~---~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-  586 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFD---FAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-  586 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHH---HHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-
Confidence            6667776 44555555558888887  8887654322   123999999888 89999999998888889999999997 


Q ss_pred             CChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC---Cce--------------
Q 040292          126 GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN---DKL--------------  188 (227)
Q Consensus       126 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~---~~~--------------  188 (227)
                      -+|.+++... .........-..+.+..|++.||++||   +.+|+||||||+|||++..   +.+              
T Consensus       587 ~sL~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  587 CSLQDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             hhHHHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            6999999874 111111111345778999999999999   9999999999999999872   321              


Q ss_pred             ------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          189 ------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 ------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                                  .||-+|+|||.+....-...+|++|+||++|..++|
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltg  710 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTG  710 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecC
Confidence                        489999999999988888899999999999999987

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.88  E-value=1.9e-23  Score=193.57  Aligned_cols=125  Identities=22%  Similarity=0.314  Sum_probs=104.4

Q ss_pred             HhcCCC-cccceeEEEE-------eeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292           95 ASQMSH-KNILKFVGCC-------LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus        95 l~~l~H-~niv~l~g~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                      .+.++| +||.+++++|       .+....++++|++ +++|.+++....    .++++.++..++.||++||.|||   
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH---   97 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD----RSVDAFECFHVFRQIVEIVNAAH---   97 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc----ccccHHHHHHHHHHHHHHHHHHH---
Confidence            456677 6888999988       3334677889988 569999997543    26899999999999999999999   


Q ss_pred             CCCeEEecCCCCceeecCCCc--------------------------------------------------------eec
Q 040292          167 SRPIVFRDIKPFTTHVNDNDK--------------------------------------------------------LIG  190 (227)
Q Consensus       167 ~~~i~H~dlkp~nil~~~~~~--------------------------------------------------------~~g  190 (227)
                      +++|+||||||+|||++..+.                                                        .+|
T Consensus        98 ~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  177 (793)
T PLN00181         98 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAME  177 (793)
T ss_pred             hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCC
Confidence            999999999999999953100                                                        136


Q ss_pred             ccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       191 ~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |++|+|||++.+..++.++|||||||++|||++|.+|
T Consensus       178 t~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~  214 (793)
T PLN00181        178 MSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSS  214 (793)
T ss_pred             CcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCc
Confidence            7779999999988999999999999999999998865

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.88  E-value=4e-23  Score=188.65  Aligned_cols=101  Identities=28%  Similarity=0.485  Sum_probs=82.7

Q ss_pred             eeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------
Q 040292          117 ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------  188 (227)
Q Consensus       117 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------  188 (227)
                      |+.||||+...+.+++......+    .....+.++++|+.||.|+|   +.+++||||||.||++++++.+        
T Consensus       672 YIQMEyCE~~ll~~iI~~N~~~~----~~d~~wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLA  744 (1351)
T KOG1035|consen  672 YIQMEYCEKTLLRDIIRRNHFNS----QRDEAWRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLA  744 (1351)
T ss_pred             EEEHhhhhhhHHHHHHHhcccch----hhHHHHHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccc
Confidence            67788888766666666543210    24567889999999999999   9999999999999999976433        


Q ss_pred             -------------------------------ecccCccccccccCCC---CCchhhHHHHHHHHHHHHhC
Q 040292          189 -------------------------------IGTFGFIAPECITTGN---CNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 -------------------------------~g~~~y~aPE~~~~~~---~~~~~DvwS~G~il~el~tg  224 (227)
                                                     +||.-|+|||++.+..   |+.|+|+||+|++++||+.-
T Consensus       745 t~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP  814 (1351)
T KOG1035|consen  745 TDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP  814 (1351)
T ss_pred             hhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence                                           6889999999997654   99999999999999999853

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=2.8e-23  Score=162.20  Aligned_cols=131  Identities=21%  Similarity=0.389  Sum_probs=114.0

Q ss_pred             chhHHHHHhcCCCcccceeEEEEeeC--------CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHH
Q 040292           88 CFNCIAFASQMSHKNILKFVGCCLET--------EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV  159 (227)
Q Consensus        88 ~~~Ei~~l~~l~H~niv~l~g~~~~~--------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl  159 (227)
                      +++|+++|..+.|+|++.+++.|...        ..+|+||.+|+ .+|.-++....    ..++..++..++.++..||
T Consensus        63 alreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~~----vr~sls~Ikk~Mk~Lm~GL  137 (376)
T KOG0669|consen   63 ALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCE-HDLAGLLSNRK----VRFSLSEIKKVMKGLMNGL  137 (376)
T ss_pred             HHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhh-hhHHHHhcCcc----ccccHHHHHHHHHHHHHHH
Confidence            44999999999999999999888642        23799999998 48888887653    2678888999999999999


Q ss_pred             HHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCC-CCchhhHHH
Q 040292          160 AYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGN-CNEKSDVYS  213 (227)
Q Consensus       160 ~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~-~~~~~DvwS  213 (227)
                      .|+|   +..|+|||+||.|+|++.++.+                         +-|.+|.+||.+.+.+ |+++.|+|+
T Consensus       138 ~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWg  214 (376)
T KOG0669|consen  138 YYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWG  214 (376)
T ss_pred             HHHH---HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHh
Confidence            9999   9999999999999999987654                         3478899999998765 899999999


Q ss_pred             HHHHHHHHHhCCC
Q 040292          214 FGALLLELLTGKK  226 (227)
Q Consensus       214 ~G~il~el~tg~~  226 (227)
                      .||++.||.||.+
T Consensus       215 AgCimaeMwtrsp  227 (376)
T KOG0669|consen  215 AGCIMAEMWTRSP  227 (376)
T ss_pred             HHHHHHHHHccCc
Confidence            9999999999875

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.87  E-value=6.7e-22  Score=179.93  Aligned_cols=100  Identities=19%  Similarity=0.180  Sum_probs=87.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++.....     ..+.  +|+.++..++||||+++++++...+..|+||||+.+++|.+++....     .+++..+
T Consensus        34 iKvi~~~~~~~~~~~~~~~--~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~-----~l~~~~~  106 (669)
T cd05610          34 VKVVKKADMINKNMVHQVQ--AERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYG-----YFDEEMA  106 (669)
T ss_pred             EEEEehhhccCHHHHHHHH--HHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcC-----CCCHHHH
Confidence            8887654322     3455  89999999999999999999999999999999999999999997543     5788889


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeec
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN  183 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~  183 (227)
                      ..++.|++.||.|||   ..+|+||||||+||+++
T Consensus       107 ~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~  138 (669)
T cd05610         107 VKYISEVALALDYLH---RHGIIHRDLKPDNMLIS  138 (669)
T ss_pred             HHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEc
Confidence            999999999999999   89999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.87  E-value=5.4e-23  Score=175.82  Aligned_cols=130  Identities=23%  Similarity=0.306  Sum_probs=116.5

Q ss_pred             hHHHHHhcCC---CcccceeEEEEeeCCcceeEeecc-cCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           90 NCIAFASQMS---HKNILKFVGCCLETEVPILVFEFV-ACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        90 ~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~E~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      -||.+|..++   |+||++++++|++++.+||+||-- ++-+|.+++.-..     .+++.++..|+.|++.|+++||  
T Consensus       615 ~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp-----~m~E~eAk~IFkQV~agi~hlh--  687 (772)
T KOG1152|consen  615 SEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKP-----RMDEPEAKLIFKQVVAGIKHLH--  687 (772)
T ss_pred             hhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccC-----ccchHHHHHHHHHHHhcccccc--
Confidence            8999999997   999999999999999999999965 4558999997654     6899999999999999999999  


Q ss_pred             CCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCC-CchhhHHHHHHHHHHHHhCC
Q 040292          166 FSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNC-NEKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~-~~~~DvwS~G~il~el~tg~  225 (227)
                       +.+|+|||||-+|+.++.+|-+                   +||..|.|||++.+.+| +..-|||++|++||.++...
T Consensus       688 -~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyke  766 (772)
T KOG1152|consen  688 -DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKE  766 (772)
T ss_pred             -ccCceecccccccEEEecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEecc
Confidence             9999999999999999987643                   79999999999998886 56789999999999887765


Q ss_pred             CC
Q 040292          226 KG  227 (227)
Q Consensus       226 ~p  227 (227)
                      -|
T Consensus       767 np  768 (772)
T KOG1152|consen  767 NP  768 (772)
T ss_pred             CC
Confidence            54

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.87  E-value=8.1e-22  Score=155.28  Aligned_cols=145  Identities=29%  Similarity=0.426  Sum_probs=124.0

Q ss_pred             eEEEcCCCC---cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLN---TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+.....   .+.+.  +|+..+.+++|+|++++++++......++++|++++++|.+++.....    .+++.....
T Consensus        29 iK~~~~~~~~~~~~~~~--~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~  102 (225)
T smart00221       29 VKVLKKEKTEKQREEFL--REIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGG----KLSEEEARF  102 (225)
T ss_pred             EEeeccccchHHHHHHH--HHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhccc----CCCHHHHHH
Confidence            787775543   24566  999999999999999999999988899999999999999999976531    278889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccc-cCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECI-TTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~-~~~~~~~  207 (227)
                      ++.+++.++.+||   ..+++|+|++|.|++++.++.+                      .++..|++||.+ ....++.
T Consensus       103 ~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~  179 (225)
T smart00221      103 YLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGE  179 (225)
T ss_pred             HHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCc
Confidence            9999999999999   8899999999999999875432                      345569999998 5566788


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+|+||+++++|++|+.|
T Consensus       180 ~~Dv~~lG~~~~~l~~g~~p  199 (225)
T smart00221      180 AVDIWSLGVILYELLWGPEP  199 (225)
T ss_pred             hhhHHHHHHHHHHHHHCCCC
Confidence            99999999999999999987

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=4.6e-22  Score=161.10  Aligned_cols=130  Identities=22%  Similarity=0.376  Sum_probs=119.3

Q ss_pred             hHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           90 NCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        90 ~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      .|-.+..+. +||.+|.+..+|..+..+++|.||.+||+|.-++....     .++++.+..+...|..||.|||   ++
T Consensus       299 tek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqr-----klpeeharfys~ei~lal~flh---~r  370 (593)
T KOG0695|consen  299 TEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEICLALNFLH---ER  370 (593)
T ss_pred             hhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhh-----cCcHHHhhhhhHHHHHHHHHHh---hc
Confidence            566666666 89999999999999999999999999999988777554     6899999999999999999999   99


Q ss_pred             CeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          169 PIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +|+.||||-+|++++..+.+                     +|||.|.|||.+.+..|....|.|++|++++||+.|+.|
T Consensus       371 giiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrsp  450 (593)
T KOG0695|consen  371 GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSP  450 (593)
T ss_pred             CeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCC
Confidence            99999999999999987643                     799999999999999999999999999999999999987

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.87  E-value=6.4e-23  Score=167.82  Aligned_cols=130  Identities=24%  Similarity=0.346  Sum_probs=113.2

Q ss_pred             hHHHHHhcCC--Ccc----cceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhh
Q 040292           90 NCIAFASQMS--HKN----ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH  163 (227)
Q Consensus        90 ~Ei~~l~~l~--H~n----iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH  163 (227)
                      -|+.+|.++.  .|+    +|.+.++|.-.++.|+|+|.+ |.|+.+++...+.   .+++...+..++.|++.++++||
T Consensus       134 iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y---~~fpi~~ir~m~~QL~~sv~fLh  209 (415)
T KOG0671|consen  134 IEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNY---IPFPIDHIRHMGYQLLESVAFLH  209 (415)
T ss_pred             HHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCc---cccchHHHHHHHHHHHHHHHHHH
Confidence            6888999993  233    788889999999999999998 5699999987543   37889999999999999999999


Q ss_pred             hcCCCCeEEecCCCCceeecCCCc--------------------------------------eecccCccccccccCCCC
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDNDK--------------------------------------LIGTFGFIAPECITTGNC  205 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~~--------------------------------------~~g~~~y~aPE~~~~~~~  205 (227)
                         +..++|-||||+||++.+...                                      ++.|..|.|||++.+-.+
T Consensus       210 ---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGw  286 (415)
T KOG0671|consen  210 ---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGW  286 (415)
T ss_pred             ---hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCc
Confidence               999999999999999865321                                      157788999999999999


Q ss_pred             CchhhHHHHHHHHHHHHhCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~  226 (227)
                      +.++||||+||||.|+.||..
T Consensus       287 S~pCDvWSiGCIL~ElytG~~  307 (415)
T KOG0671|consen  287 SQPCDVWSIGCILVELYTGET  307 (415)
T ss_pred             CCccCceeeeeEEEEeeccce
Confidence            999999999999999999963

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.87  E-value=2e-22  Score=155.47  Aligned_cols=140  Identities=21%  Similarity=0.309  Sum_probs=116.1

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCC-CcccceeEEEEeeCC--cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLETE--VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+++-. .....  +|+++|..|. ||||+.+++...+..  .+.||+||+.+.+...+..        .++...+..
T Consensus        68 iKiLKPVk-kkKIk--REikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~--------tl~d~dIry  136 (338)
T KOG0668|consen   68 IKILKPVK-KKKIK--REIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP--------TLTDYDIRY  136 (338)
T ss_pred             EeeechHH-HHHHH--HHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh--------hhchhhHHH
Confidence            77776543 34455  9999999995 999999999987653  5679999999877766553        566677889


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~~  208 (227)
                      ++.+++.||.|||   +.+|+|||+||.|++++.....                     +.+.+|..||.+.+-+ |+-.
T Consensus       137 Y~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYS  213 (338)
T KOG0668|consen  137 YIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYS  213 (338)
T ss_pred             HHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhcccc
Confidence            9999999999999   9999999999999999865321                     5677889999987654 7888


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      -|+|||||++.+|+..+.|
T Consensus       214 LD~WS~GcmlA~miFrkep  232 (338)
T KOG0668|consen  214 LDMWSLGCMLASMIFRKEP  232 (338)
T ss_pred             HHHHHHHHHHHHHHhccCc
Confidence            9999999999999988876

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=1e-22  Score=160.82  Aligned_cols=129  Identities=28%  Similarity=0.392  Sum_probs=111.1

Q ss_pred             chhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           88 CFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        88 ~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      +++|+++|..++|.|++..++......     +.|+++|.|. .+|...+-+..     +++...+.-+..||++||+||
T Consensus        99 vFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSPQ-----~Ls~DHvKVFlYQILRGLKYL  172 (449)
T KOG0664|consen   99 VFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVSPQ-----ALTPDHVKVFVYQILRGLKYL  172 (449)
T ss_pred             HHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheeccCC-----CCCcchhhhhHHHHHhhhHHH
Confidence            349999999999999999988776543     5689999996 58888887643     788888999999999999999


Q ss_pred             hhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCC-CCchhhHHHHHHHHH
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGN-CNEKSDVYSFGALLL  219 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~-~~~~~DvwS~G~il~  219 (227)
                      |   +.+|+||||||.|.+++++..+                      +-|.+|.|||.+.+.+ |+...||||.||++.
T Consensus       173 H---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFa  249 (449)
T KOG0664|consen  173 H---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFA  249 (449)
T ss_pred             h---hcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHH
Confidence            9   9999999999999999987643                      4677899999999875 899999999999999


Q ss_pred             HHHhCC
Q 040292          220 ELLTGK  225 (227)
Q Consensus       220 el~tg~  225 (227)
                      |++-++
T Consensus       250 ELLgRr  255 (449)
T KOG0664|consen  250 ELLQRK  255 (449)
T ss_pred             HHHhhh
Confidence            988654

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.84  E-value=4.2e-21  Score=158.00  Aligned_cols=149  Identities=22%  Similarity=0.365  Sum_probs=121.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC-CcceeEeecccCCChhhhhcCCC---CCCCcccCHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET-EVPILVFEFVACGTLADRIHDPN---GSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~---~~~~~~l~~~  146 (227)
                      ||.++....+   ..+.  .|--.+..+.|||+.++.+++.+. ..++.++.++--|+|..++.-..   .+..+.+...
T Consensus       319 vKTvk~~AS~iQv~~~L--~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~  396 (563)
T KOG1024|consen  319 VKTVKQHASQIQVNLLL--QESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTI  396 (563)
T ss_pred             HHHHHhcccHHHHHHHH--HHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHH
Confidence            7777766555   3445  888888899999999999999765 46778899998899999997221   1223467778


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ec-----ccCccccccccCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IG-----TFGFIAPECITTG  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g-----~~~y~aPE~~~~~  203 (227)
                      +....+.|++.|++|||   +++++|.||..+|.++++.-.+                  .|     ...||+||.+...
T Consensus       397 qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~  473 (563)
T KOG1024|consen  397 QLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNS  473 (563)
T ss_pred             HHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhh
Confidence            88999999999999999   9999999999999999875332                  22     2359999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          204 NCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .|+..+|+||||+++|||+| |+.|
T Consensus       474 ~yssasDvWsfGVllWELmtlg~~P  498 (563)
T KOG1024|consen  474 HYSSASDVWSFGVLLWELMTLGKLP  498 (563)
T ss_pred             hhcchhhhHHHHHHHHHHHhcCCCC
Confidence            99999999999999999987 5555

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.83  E-value=2.2e-20  Score=163.60  Aligned_cols=134  Identities=20%  Similarity=0.263  Sum_probs=102.4

Q ss_pred             hHHHHHhcCCCccc-----ceeEEEEee--------CCcceeEeecccCCChhhhhcCCCCCC-----------------
Q 040292           90 NCIAFASQMSHKNI-----LKFVGCCLE--------TEVPILVFEFVACGTLADRIHDPNGSQ-----------------  139 (227)
Q Consensus        90 ~Ei~~l~~l~H~ni-----v~l~g~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~~~~-----------------  139 (227)
                      .|+..+.+++|.|+     ++++++|..        ++..+||+||+++++|.+++....+..                 
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            57777788866654     677887753        346799999999999999987432110                 


Q ss_pred             --CcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCcc
Q 040292          140 --LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFI  195 (227)
Q Consensus       140 --~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~  195 (227)
                        ...+++..+..++.|++.||.|||   ..+++||||||+||+++.++.+                      .+++.|+
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~  377 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYS  377 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCccee
Confidence              013466778889999999999999   8999999999999999876532                      1367899


Q ss_pred             ccccccCCCC----------------------CchhhHHHHHHHHHHHHhCCC
Q 040292          196 APECITTGNC----------------------NEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       196 aPE~~~~~~~----------------------~~~~DvwS~G~il~el~tg~~  226 (227)
                      |||.+.....                      ..+.|+||+||++++|++|..
T Consensus       378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l  430 (507)
T PLN03224        378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPEL  430 (507)
T ss_pred             ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCC
Confidence            9998753321                      124699999999999999864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.82  E-value=1.2e-21  Score=169.87  Aligned_cols=130  Identities=27%  Similarity=0.410  Sum_probs=117.2

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      .|+-+++..+|||||.++|.+...+..+++||||.+|+|.+.-+-.+     ++++.++...++..++||+|||   +.+
T Consensus        61 qei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~Tg-----plselqiayvcRetl~gl~ylh---s~g  132 (829)
T KOG0576|consen   61 QEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTG-----PLSELQIAYVCRETLQGLKYLH---SQG  132 (829)
T ss_pred             cceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecc-----cchhHHHHHHHhhhhccchhhh---cCC
Confidence            88999999999999999999999999999999999999999887765     8999999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce---------------------ecccCcccccccc---CCCCCchhhHHHHHHHHHHHHhCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT---TGNCNEKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~---~~~~~~~~DvwS~G~il~el~tg~  225 (227)
                      -+|||||-.||++++.+.+                     +||++|||||+..   .+.|...+|+|+.|+...|+..=+
T Consensus       133 k~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLq  212 (829)
T KOG0576|consen  133 KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQ  212 (829)
T ss_pred             cccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcC
Confidence            9999999999999887643                     7999999999874   456899999999999988876554


Q ss_pred             CC
Q 040292          226 KG  227 (227)
Q Consensus       226 ~p  227 (227)
                      +|
T Consensus       213 pp  214 (829)
T KOG0576|consen  213 PP  214 (829)
T ss_pred             Cc
Confidence            44

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.82  E-value=9.9e-20  Score=140.96  Aligned_cols=139  Identities=30%  Similarity=0.519  Sum_probs=120.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+..++.++|++++++++++......++++|++++++|.+++....    ..+++..+..
T Consensus        23 ~K~~~~~~~~~~~~~~~--~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~----~~~~~~~~~~   96 (215)
T cd00180          23 IKIIKKEDSSSLLEELL--REIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENE----GKLSEDEILR   96 (215)
T ss_pred             EEEeccccchhHHHHHH--HHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhcc----CCCCHHHHHH
Confidence            8888776553   5677  99999999999999999999999899999999999999999987642    1578889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-CCce---------------------ecccCccccccccCC-CCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      ++.++++++.+||   ..+++|+||+|.||+++. ++.+                     .+...|++||..... ..+.
T Consensus        97 ~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~  173 (215)
T cd00180          97 ILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSE  173 (215)
T ss_pred             HHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCc
Confidence            9999999999999   889999999999999998 4432                     245568999998776 7788


Q ss_pred             hhhHHHHHHHHHHH
Q 040292          208 KSDVYSFGALLLEL  221 (227)
Q Consensus       208 ~~DvwS~G~il~el  221 (227)
                      +.|+|++|++++++
T Consensus       174 ~~D~~~lg~~~~~l  187 (215)
T cd00180         174 KSDIWSLGVILYEL  187 (215)
T ss_pred             hhhhHHHHHHHHHH
Confidence            99999999999886

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.82  E-value=3.9e-20  Score=141.30  Aligned_cols=89  Identities=27%  Similarity=0.277  Sum_probs=78.6

Q ss_pred             CChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------ecc
Q 040292          126 GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------IGT  191 (227)
Q Consensus       126 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------~g~  191 (227)
                      |+|.+++...+.    ++++..+..++.|++.||.|||   +.+      ||+||+++.++.+              .|+
T Consensus         1 GsL~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~fG~~~~~~~~~~~g~   67 (176)
T smart00750        1 VSLADILEVRGR----PLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKLDGSVAFKTPEQSRVD   67 (176)
T ss_pred             CcHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceeeccceEeeccccCCCc
Confidence            689999976442    6899999999999999999999   665      9999999876532              578


Q ss_pred             cCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       192 ~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.|+|||++.+..++.++|||||||++|||+||+.|
T Consensus        68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p  103 (176)
T smart00750       68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELP  103 (176)
T ss_pred             ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCC
Confidence            999999999998999999999999999999999987

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.81  E-value=1.7e-20  Score=155.23  Aligned_cols=141  Identities=24%  Similarity=0.345  Sum_probs=125.3

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...+......  +|+.+|..+ .+.||+.+.+++..++..++|+||+++-...++..        .++...+..++
T Consensus        69 lk~i~~ts~p~ri~--~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~--------~l~~~~i~~Yl  138 (418)
T KOG1167|consen   69 LKAIYRTSSPSRIL--NELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR--------SLSLAEIRWYL  138 (418)
T ss_pred             eeecccccCchHHH--HHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHh--------cCCHHHHHHHH
Confidence            88888888888888  999999999 89999999999999999999999999999998887        45678889999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------------------------------
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------------------------------  188 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------------------------------  188 (227)
                      +.++.||.++|   .++|+|||+||+|++.+.....                                            
T Consensus       139 ~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~  215 (418)
T KOG1167|consen  139 RNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVAT  215 (418)
T ss_pred             HHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccccc
Confidence            99999999999   9999999999999987652100                                            


Q ss_pred             ----------------------ecccCccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ----------------------IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ----------------------~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                            .||+||.|||++... ..+++.||||.|++++.+++++.|
T Consensus       216 ~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~P  277 (418)
T KOG1167|consen  216 ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYP  277 (418)
T ss_pred             ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccc
Confidence                                  499999999999654 578999999999999999999876

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.81  E-value=5.8e-20  Score=163.99  Aligned_cols=113  Identities=24%  Similarity=0.247  Sum_probs=84.1

Q ss_pred             eeCCcceeEeecccCCChhhhhcCCCCCCC---------------cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecC
Q 040292          111 LETEVPILVFEFVACGTLADRIHDPNGSQL---------------EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDI  175 (227)
Q Consensus       111 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~---------------~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dl  175 (227)
                      ..+...++|+||+.+++|.+++........               .......+..++.|++.||.|||   +++|+||||
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDL  281 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDV  281 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcC
Confidence            345678999999999999998875421000               01112345678999999999999   999999999


Q ss_pred             CCCceeecCC-Cce----------------------ecccCccccccccCC----------------------CCCchhh
Q 040292          176 KPFTTHVNDN-DKL----------------------IGTFGFIAPECITTG----------------------NCNEKSD  210 (227)
Q Consensus       176 kp~nil~~~~-~~~----------------------~g~~~y~aPE~~~~~----------------------~~~~~~D  210 (227)
                      ||+|||++.+ +.+                      ++++.|+|||.+...                      .+..++|
T Consensus       282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D  361 (566)
T PLN03225        282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD  361 (566)
T ss_pred             CHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence            9999999853 221                      467889999965322                      1334669


Q ss_pred             HHHHHHHHHHHHhCCC
Q 040292          211 VYSFGALLLELLTGKK  226 (227)
Q Consensus       211 vwS~G~il~el~tg~~  226 (227)
                      |||+||++|||+++..
T Consensus       362 VwSlGviL~el~~~~~  377 (566)
T PLN03225        362 IYSAGLIFLQMAFPNL  377 (566)
T ss_pred             cHHHHHHHHHHHhCcC
Confidence            9999999999998653

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.9e-19  Score=151.64  Aligned_cols=103  Identities=16%  Similarity=0.214  Sum_probs=81.3

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-----Cc---ccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCC
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-----HK---NILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQL  140 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-----H~---niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~  140 (227)
                      +|..+....- +.-.  .||++|++++     |+   +||+|++.|..    +.++|+|+|++ |-+|..+|.....   
T Consensus       108 lKVvKSAqhYtEaAl--DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~Y---  181 (590)
T KOG1290|consen  108 LKVVKSAQHYTEAAL--DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNY---  181 (590)
T ss_pred             EEEEehhhHHHHHHH--HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCC---
Confidence            6666554333 3333  8999999982     33   59999999975    44789999999 6789998875432   


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND  184 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~  184 (227)
                      +-++...+..|+.|++.||.|||.  ..+|+|-||||+|||+..
T Consensus       182 rGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~  223 (590)
T KOG1290|consen  182 RGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCS  223 (590)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeec
Confidence            257788899999999999999997  569999999999999854

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.79  E-value=9.7e-21  Score=160.54  Aligned_cols=144  Identities=22%  Similarity=0.223  Sum_probs=121.8

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCC------cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSH------KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H------~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.+...... ..=.  +|+.+|++|+.      -|+++++-.|...+++|||+|-+. .+|.++|...+..-  -+...
T Consensus       462 iKIIRnNE~M~KtGl--~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nv--GL~ik  536 (752)
T KOG0670|consen  462 IKIIRNNEVMHKTGL--KELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNV--GLHIK  536 (752)
T ss_pred             EEEeecchHHhhhhh--HHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCccc--ceeeh
Confidence            8888766544 3334  89999999943      489999999999999999999885 79999998766422  46667


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      .+..++.|+..||..|.   ..+++|.||||+|||+++...+                    .-+..|.|||.+.+-.|+
T Consensus       537 aVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd  613 (752)
T KOG0670|consen  537 AVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYD  613 (752)
T ss_pred             HHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCccc
Confidence            88999999999999999   8999999999999999876543                    122349999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCC
Q 040292          207 EKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~  225 (227)
                      ...|+||.||+|||+.||+
T Consensus       614 ~~iD~WSvgctLYElYtGk  632 (752)
T KOG0670|consen  614 YPIDTWSVGCTLYELYTGK  632 (752)
T ss_pred             CCccceeeceeeEEeeccc
Confidence            9999999999999999997

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.77  E-value=3.6e-19  Score=140.82  Aligned_cols=155  Identities=19%  Similarity=0.275  Sum_probs=122.7

Q ss_pred             eeecCCC--eEEEcCC----CCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCC
Q 040292           67 GFLQDHP--ISEFGDN----LNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQL  140 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~  140 (227)
                      |.++|..  +|.++-.    ..+++|.  .|.-.|+-+.||||..++|.|.......++..||+.|||+..++...+   
T Consensus       209 grwqgndivakil~vr~~t~risrdfn--eefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~---  283 (448)
T KOG0195|consen  209 GRWQGNDIVAKILNVREVTARISRDFN--EEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS---  283 (448)
T ss_pred             ccccCcchhhhhhhhhhcchhhcchhh--hhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCcc---
Confidence            7777766  5555422    2237888  999999999999999999999999999999999999999999987542   


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------ecccCccccccccCCC
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------~g~~~y~aPE~~~~~~  204 (227)
                      -.++..++..++.++++|+.|||+. ..-|.-.-|.+..+++|++-+.                .-+|.|++||.+....
T Consensus       284 vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkp  362 (448)
T KOG0195|consen  284 VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKP  362 (448)
T ss_pred             EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCc
Confidence            2457778999999999999999953 2333334577778888876432                3467899999997665


Q ss_pred             C---CchhhHHHHHHHHHHHHhCCCC
Q 040292          205 C---NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~---~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .   -..+|+|||.+++||+.|+.-|
T Consensus       363 ed~n~raadmwsfaillwel~trevp  388 (448)
T KOG0195|consen  363 EDLNIRAADMWSFAILLWELNTREVP  388 (448)
T ss_pred             hhcchhhhhHHHHHHHHHHhhccccc
Confidence            3   3568999999999999998765

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.74  E-value=4.1e-19  Score=140.20  Aligned_cols=143  Identities=22%  Similarity=0.346  Sum_probs=110.7

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEE-EeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGC-CLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~-~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+....-. .+|.  +|...--.| .|.||+.-|++ |...+.+++++||+|.|+|.+-+...      -+.+.....
T Consensus        54 lKavp~p~tt~~dF~--rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~------GigE~~~K~  125 (378)
T KOG1345|consen   54 LKAVPRPQTTQADFV--REFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAA------GIGEANTKK  125 (378)
T ss_pred             eeccCcchhhHHHHH--HHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcc------cccHHHHHH
Confidence            5555443332 6888  888765555 68999988765 45556667999999999999877653      367888899


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------e--------cccCccccccccCC---C--C
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------I--------GTFGFIAPECITTG---N--C  205 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------~--------g~~~y~aPE~~~~~---~--~  205 (227)
                      ++.|+++|+.|+|   +++++|||||.+|||+-+..-.            .        .+..|.+||.+...   .  .
T Consensus       126 v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~  202 (378)
T KOG1345|consen  126 VFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVV  202 (378)
T ss_pred             HHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEe
Confidence            9999999999999   9999999999999998653211            1        22358889877432   2  4


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.+|+|.||++++..+||+.|
T Consensus       203 ~ps~D~WqfGIi~f~cltG~~P  224 (378)
T KOG1345|consen  203 NPSTDIWQFGIIFFYCLTGKFP  224 (378)
T ss_pred             cccccchheeeeeeeeecCCCc
Confidence            6788999999999999999987

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.66  E-value=1.1e-15  Score=125.14  Aligned_cols=147  Identities=30%  Similarity=0.508  Sum_probs=121.6

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCc-ccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHK-NILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~-niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+......     ..+.  +|+.+++.+.|+ +++++.+.+......+++++++.++++.+++......  ..+....
T Consensus        27 ~k~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~  102 (384)
T COG0515          27 LKVLAKKLESKSKEVERFL--REIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRK--GPLSESE  102 (384)
T ss_pred             EEeechhhccchhHHHHHH--HHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccc--cCCCHHH
Confidence            5666544332     3566  999999999888 7999999997777789999999999999777654311  1577888


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc----------------------------eecccCcccccc
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK----------------------------LIGTFGFIAPEC  199 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~----------------------------~~g~~~y~aPE~  199 (227)
                      ...++.|++.++.|+|   ..+++|||+||+|++++..+.                            ..|+..|++||.
T Consensus       103 ~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~  179 (384)
T COG0515         103 ALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV  179 (384)
T ss_pred             HHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHH
Confidence            9999999999999999   899999999999999986541                            146678999999


Q ss_pred             ccC---CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITT---GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~---~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..   ...+...|+||+|++++++++|..|
T Consensus       180 ~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p  210 (384)
T COG0515         180 LLGLSLAYASSSSDIWSLGITLYELLTGLPP  210 (384)
T ss_pred             hcCCCCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            987   5788999999999999999999876

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.62  E-value=5.2e-17  Score=145.28  Aligned_cols=129  Identities=22%  Similarity=0.335  Sum_probs=110.5

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      .|+.+-..+.|||++.....+.+.....-+||||++ +|..++....     .+...++..++.|++.|++|+|   +.+
T Consensus       370 sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~-----~~~~~e~~c~fKqL~~Gv~y~h---~~G  440 (601)
T KOG0590|consen  370 SEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNG-----KLTPLEADCFFKQLLRGVKYLH---SMG  440 (601)
T ss_pred             hheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhccc-----ccchhhhhHHHHHHHHHHHHHH---hcC
Confidence            566667788999998887777766666666999998 9999998753     4677788899999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce-------------------------ecccCccccccccCCCCCch-hhHHHHHHHHHHHHh
Q 040292          170 IVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGNCNEK-SDVYSFGALLLELLT  223 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~~~~~-~DvwS~G~il~el~t  223 (227)
                      +.|||+||+|+++..++.+                         +|+-+|+|||++....|.+. .||||.|+++..|.+
T Consensus       441 iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~  520 (601)
T KOG0590|consen  441 LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMIL  520 (601)
T ss_pred             ceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEec
Confidence            9999999999999887533                         68889999999999988764 699999999999999


Q ss_pred             CCCC
Q 040292          224 GKKG  227 (227)
Q Consensus       224 g~~p  227 (227)
                      |+.|
T Consensus       521 ~~~~  524 (601)
T KOG0590|consen  521 GRFP  524 (601)
T ss_pred             CCCc
Confidence            9765

>PRK10345 hypothetical protein; Provisional

Probab=99.57  E-value=8.6e-15  Score=114.98  Aligned_cols=99  Identities=13%  Similarity=0.154  Sum_probs=77.8

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcC-----CCcccceeEEEEeeCC---cce-eEeec--ccCCChhhhhcCCCCCCC
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQM-----SHKNILKFVGCCLETE---VPI-LVFEF--VACGTLADRIHDPNGSQL  140 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l-----~H~niv~l~g~~~~~~---~~~-lV~E~--~~~gsL~~~l~~~~~~~~  140 (227)
                      ||++......  +.+.  +|+.+++++     .||||++++|++.++.   ..+ +|+||  +++|+|.+++...     
T Consensus        29 IKv~~~~~~~~~~~~~--rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~-----  101 (210)
T PRK10345         29 IKIVYHRGDGGDKEIR--RELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC-----  101 (210)
T ss_pred             EEEEeccccchHHHHH--HHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc-----
Confidence            7777654222  4566  999999999     5799999999998763   333 78999  6679999999652     


Q ss_pred             cccCHHHHHHHHHHHHHHH-HHhhhcCCCCeEEecCCCCceeecCC
Q 040292          141 EPFLMKHRLKVAMEIANAV-AYLHVGFSRPIVFRDIKPFTTHVNDN  185 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl-~~LH~~~~~~i~H~dlkp~nil~~~~  185 (227)
                       .+++.  ..++.+++.++ +|||   +++|+||||||+||+++..
T Consensus       102 -~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~  141 (210)
T PRK10345        102 -RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRI  141 (210)
T ss_pred             -cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEecc
Confidence             34444  35678888887 9999   9999999999999999753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.56  E-value=1.5e-15  Score=120.15  Aligned_cols=130  Identities=18%  Similarity=0.179  Sum_probs=95.2

Q ss_pred             eEEEcCCCCc-c----c------ccchhHHHHHhcCCCcccceeEEEEeeC--------CcceeEeecccCCChhhhhcC
Q 040292           74 ISEFGDNLNT-E----E------YYCFNCIAFASQMSHKNILKFVGCCLET--------EVPILVFEFVACGTLADRIHD  134 (227)
Q Consensus        74 vK~~~~~~~~-~----~------~~~~~Ei~~l~~l~H~niv~l~g~~~~~--------~~~~lV~E~~~~gsL~~~l~~  134 (227)
                      ||.+...... +    .      +.  +|+..+.++.||+|..+..++...        +..++||||++|.+|.++.. 
T Consensus        59 iKvf~~~~~~~~~~~~~f~~g~~~e--~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-  135 (232)
T PRK10359         59 LKVFAPKVKRTERFLKSFVKGDYYE--NLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-  135 (232)
T ss_pred             EEEechhcCchHHHHHhhhhhHHHH--HHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-
Confidence            9998765444 1    1      45  899999999999999998886532        35789999999999987632 


Q ss_pred             CCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCceecccCcc----cc----ccccCCCCC
Q 040292          135 PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFGFI----AP----ECITTGNCN  206 (227)
Q Consensus       135 ~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~g~~~y~----aP----E~~~~~~~~  206 (227)
                              ++.    ....+++.++..+|   ..+++|||++|+|+++++++..+..++..    .+    ..+....+.
T Consensus       136 --------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~gi~liDfg~~~~~~e~~a~d~~vler~y~  200 (232)
T PRK10359        136 --------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNGLRIIDLSGKRCTAQRKAKDRIDLERHYG  200 (232)
T ss_pred             --------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCCEEEEECCCcccccchhhHHHHHHHhHhc
Confidence                    222    24568999999999   99999999999999999877333332211    11    122333466


Q ss_pred             chhhHHHHHHHHHHH
Q 040292          207 EKSDVYSFGALLLEL  221 (227)
Q Consensus       207 ~~~DvwS~G~il~el  221 (227)
                      .++|+||||+++.-.
T Consensus       201 ~~~di~~lg~~~~~~  215 (232)
T PRK10359        201 IKNEIKDLGYYLLIY  215 (232)
T ss_pred             ccccccceeEeehHH
Confidence            799999999987643

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.56  E-value=8.2e-15  Score=123.76  Aligned_cols=98  Identities=16%  Similarity=0.083  Sum_probs=76.4

Q ss_pred             cccchhHHHHHhcCCCcccce-eEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhh
Q 040292           85 EYYCFNCIAFASQMSHKNILK-FVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH  163 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~-l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH  163 (227)
                      .|.  +|+.+|++++|+|++. +++    .+..++||||++|++|.. ..        +..   ...++.+++++|.|||
T Consensus        67 ~~~--~E~~iL~~L~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~-~~--------~~~---~~~~~~~i~~aL~~lH  128 (365)
T PRK09188         67 LAA--REIRALKTVRGIGVVPQLLA----TGKDGLVRGWTEGVPLHL-AR--------PHG---DPAWFRSAHRALRDLH  128 (365)
T ss_pred             HHH--HHHHHHHhccCCCCCcEEEE----cCCcEEEEEccCCCCHHH-hC--------ccc---hHHHHHHHHHHHHHHH
Confidence            466  9999999999999985 443    246799999999999963 21        111   1357889999999999


Q ss_pred             hcCCCCeEEecC-CCCceeecCCCce-----------------------------ecccCccccccccCC
Q 040292          164 VGFSRPIVFRDI-KPFTTHVNDNDKL-----------------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       164 ~~~~~~i~H~dl-kp~nil~~~~~~~-----------------------------~g~~~y~aPE~~~~~  203 (227)
                         +++|+|||| ||+||+++.++.+                             .+++.|+|||.+...
T Consensus       129 ---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        129 ---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             ---HCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence               999999999 9999999766532                             356668899988543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.55  E-value=1.1e-15  Score=139.64  Aligned_cols=168  Identities=19%  Similarity=0.225  Sum_probs=123.9

Q ss_pred             cccHHHHHHhhcCCCCCCeeecCCC--eEEEcCCCCc---ccccchhHHHH--HhcCCCcccceeEEEEeeCCcceeEee
Q 040292           49 NFIALELEGATNNYDPGKGFLQDHP--ISEFGDNLNT---EEYYCFNCIAF--ASQMSHKNILKFVGCCLETEVPILVFE  121 (227)
Q Consensus        49 ~~~~~~l~~~~~~f~~~~~~~~~~~--vK~~~~~~~~---~~~~~~~Ei~~--l~~l~H~niv~l~g~~~~~~~~~lV~E  121 (227)
                      ++-+.+-...|..+....+.-+.+.  ||.+-.....   +.|.  ++++-  ..-.+|||++++.-+-....-.|||-+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~--qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFK--QRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHH--HHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            3555555555655555556554444  8888665543   4554  44433  444599999998877777777899999


Q ss_pred             cccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee------------
Q 040292          122 FVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI------------  189 (227)
Q Consensus       122 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~------------  189 (227)
                      |.. .+|+|.+..++     -+...+...|+.|++.|+.-+|   ..+|+|||||.+|||+++-+.+.            
T Consensus       102 yvk-hnLyDRlSTRP-----FL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL  172 (1431)
T KOG1240|consen  102 YVK-HNLYDRLSTRP-----FLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYL  172 (1431)
T ss_pred             HHh-hhhhhhhccch-----HHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccC
Confidence            997 49999998764     3566678889999999999999   99999999999999998755431            


Q ss_pred             ------------cc----cCccccccccCC----------C-CCchhhHHHHHHHHHHHHhCCCC
Q 040292          190 ------------GT----FGFIAPECITTG----------N-CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       190 ------------g~----~~y~aPE~~~~~----------~-~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                  -|    ..|.|||.+...          . .+++.||+|+||++.|+++-..|
T Consensus       173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P  237 (1431)
T KOG1240|consen  173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP  237 (1431)
T ss_pred             CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence                        11    139999987431          1 46789999999999999875443

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.54  E-value=1.4e-14  Score=125.06  Aligned_cols=126  Identities=26%  Similarity=0.436  Sum_probs=105.2

Q ss_pred             HhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCe-EEe
Q 040292           95 ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPI-VFR  173 (227)
Q Consensus        95 l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i-~H~  173 (227)
                      |+.+.|.|+.+++|.+.++...+.|.+||+.|+|.|.+....    ..+++.-...++.+++.||.|+|   ..+| .|+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~----~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg   73 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED----IKLDYFFILSFIRDISKGLAYLH---NSPIGYHG   73 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc----cCccHHHHHHHHHHHHHHHHHHh---cCcceeee
Confidence            467899999999999999999999999999999999998743    26888888999999999999999   4444 999


Q ss_pred             cCCCCceeecCCCcee-----------------------cccCccccccccCCC-------CCchhhHHHHHHHHHHHHh
Q 040292          174 DIKPFTTHVNDNDKLI-----------------------GTFGFIAPECITTGN-------CNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       174 dlkp~nil~~~~~~~~-----------------------g~~~y~aPE~~~~~~-------~~~~~DvwS~G~il~el~t  223 (227)
                      .+++.|.+++..-.+.                       -..-|.|||.+....       .+.+.|+||||++++|+++
T Consensus        74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~  153 (484)
T KOG1023|consen   74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF  153 (484)
T ss_pred             eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence            9999999998643221                       112389999986642       3567999999999999999


Q ss_pred             CCCC
Q 040292          224 GKKG  227 (227)
Q Consensus       224 g~~p  227 (227)
                      .+.|
T Consensus       154 r~~~  157 (484)
T KOG1023|consen  154 RSGP  157 (484)
T ss_pred             ccCc
Confidence            8765

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.53  E-value=6.5e-15  Score=127.95  Aligned_cols=128  Identities=25%  Similarity=0.274  Sum_probs=114.4

Q ss_pred             hHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           90 NCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        90 ~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      .|-.++..++ ||.+|++.-.+..+...++++++..+|.|...+....     .+++.....+...++-+++++|   ..
T Consensus        45 ~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~-----~f~~~~~~~~~aelaLald~lh---~l  116 (612)
T KOG0603|consen   45 QERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEV-----MFDELDVAFYLAELALALDHLH---KL  116 (612)
T ss_pred             cHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCC-----chHHHHHHHHHHHHHHHHhhcc---hh
Confidence            7788888885 9999999999999999999999999999998887654     5677777888889999999999   99


Q ss_pred             CeEEecCCCCceeecCCCce-----------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          169 PIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++++||+|++||+++.+|.+                 +||..|||||.+.  .....+|.||||++.+||+||..|
T Consensus       117 ~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~p  190 (612)
T KOG0603|consen  117 GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLP  190 (612)
T ss_pred             HHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCC
Confidence            99999999999999998843                 6899999999998  567788999999999999999865

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.49  E-value=7.3e-14  Score=108.32  Aligned_cols=87  Identities=14%  Similarity=0.166  Sum_probs=67.0

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh-hhcCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL-HVGFSR  168 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L-H~~~~~  168 (227)
                      +|+.++.++.++++........  ...++||||++++++........     ++++.....++.|++.+|.++ |   +.
T Consensus        68 ~E~~~l~~l~~~~v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~-----~~~~~~~~~i~~qi~~~L~~l~H---~~  137 (190)
T cd05147          68 KEMRNLKRLVTAGIPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDA-----PLSESKARELYLQVIQIMRILYQ---DC  137 (190)
T ss_pred             HHHHHHHHHHHCCCCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcC-----CCCHHHHHHHHHHHHHHHHHHHH---hC
Confidence            3999999998877644333222  23489999999877665432222     678888999999999999999 7   88


Q ss_pred             CeEEecCCCCceeecCCC
Q 040292          169 PIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~  186 (227)
                      +++||||||+||+++++.
T Consensus       138 giiHrDlkP~NIli~~~~  155 (190)
T cd05147         138 RLVHADLSEYNLLYHDGK  155 (190)
T ss_pred             CcccCCCCHHHEEEECCc
Confidence            999999999999998543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.48  E-value=1.5e-13  Score=106.95  Aligned_cols=121  Identities=11%  Similarity=0.027  Sum_probs=88.3

Q ss_pred             ccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           86 YYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        86 ~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      |.  +|+++|++| .|+++++++++    +..+++|||+.|.+|...+..            ....++.|++++|.++| 
T Consensus        48 ~~--rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~------------~~~~~~~qi~~~L~~lH-  108 (218)
T PRK12274         48 AR--REALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR------------GDLAYFRAARRLLQQLH-  108 (218)
T ss_pred             HH--HHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh------------hhHHHHHHHHHHHHHHH-
Confidence            55  999999999 45889999886    456899999998888653311            11346789999999999 


Q ss_pred             cCCCCeEEecC-CCCceeecCCCcee----------------------------------cccCccccccccC-CCCC-c
Q 040292          165 GFSRPIVFRDI-KPFTTHVNDNDKLI----------------------------------GTFGFIAPECITT-GNCN-E  207 (227)
Q Consensus       165 ~~~~~i~H~dl-kp~nil~~~~~~~~----------------------------------g~~~y~aPE~~~~-~~~~-~  207 (227)
                        +.+++|||| ||+||+++.++.+.                                  .++.+++|+-..- ...+ .
T Consensus       109 --~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~  186 (218)
T PRK12274        109 --RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWI  186 (218)
T ss_pred             --HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhH
Confidence              999999999 79999998776431                                  2333444432211 1233 4


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ..+.++.|.-+|.++||.-|
T Consensus       187 ~~~w~~~g~~~~~~~~~~~~  206 (218)
T PRK12274        187 RELWFATGKPVYRFVTRRVL  206 (218)
T ss_pred             HHHHHHhcchHHHHHhccCC
Confidence            56777999999999998753

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.48  E-value=2.4e-13  Score=113.83  Aligned_cols=134  Identities=22%  Similarity=0.264  Sum_probs=110.8

Q ss_pred             cccchhHHHHHhcCCC----cccceeEEEE-eeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHH
Q 040292           85 EYYCFNCIAFASQMSH----KNILKFVGCC-LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV  159 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H----~niv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl  159 (227)
                      .+.  .|+.++..+..    +++..+++.. ..+...++||+.+ |.+|.++.....   ...++......++.|++.+|
T Consensus        62 ~l~--~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l  135 (322)
T KOG1164|consen   62 VLK--IEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNAL  135 (322)
T ss_pred             cch--hHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHH
Confidence            455  89999998863    5788888888 4667789999988 789999775443   13688889999999999999


Q ss_pred             HHhhhcCCCCeEEecCCCCceeecCCC-c-----------------------------------eecccCccccccccCC
Q 040292          160 AYLHVGFSRPIVFRDIKPFTTHVNDND-K-----------------------------------LIGTFGFIAPECITTG  203 (227)
Q Consensus       160 ~~LH~~~~~~i~H~dlkp~nil~~~~~-~-----------------------------------~~g~~~y~aPE~~~~~  203 (227)
                      +++|   +.+++||||||+|+++.... .                                   ..||..|.++.+-.+.
T Consensus       136 ~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~  212 (322)
T KOG1164|consen  136 EDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI  212 (322)
T ss_pred             HHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCC
Confidence            9999   99999999999999987532 0                                   0277778888887888


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..+.+.|+||++-++.++..|..|
T Consensus       213 e~~r~DDles~~Y~l~el~~g~LP  236 (322)
T KOG1164|consen  213 EQGRRDDLESLFYMLLELLKGSLP  236 (322)
T ss_pred             ccCCchhhhhHHHHHHHHhcCCCC
Confidence            889999999999999999999765

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.43  E-value=2.2e-13  Score=113.22  Aligned_cols=119  Identities=22%  Similarity=0.275  Sum_probs=91.3

Q ss_pred             CCcccceeEEEEeeCC---------------------------cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           99 SHKNILKFVGCCLETE---------------------------VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        99 ~H~niv~l~g~~~~~~---------------------------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      .|||||++.++|.+.-                           ..|+||...+ .+|.+++....      .+......+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~------~s~r~~~~~  346 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH------RSYRTGRVI  346 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC------CchHHHHHH
Confidence            6999999998886521                           2488888876 48999887653      344556778


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC--Cce-----------------------------ecccCccccccc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN--DKL-----------------------------IGTFGFIAPECI  200 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~--~~~-----------------------------~g~~~y~aPE~~  200 (227)
                      +.|+++|+.|||   .+++.|||+|++||++.-+  +..                             -|...-||||..
T Consensus       347 laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~  423 (598)
T KOG4158|consen  347 LAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA  423 (598)
T ss_pred             HHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence            899999999999   9999999999999997532  211                             244457899988


Q ss_pred             cCCC------CCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TTGN------CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~~~------~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ....      --.|+|.|+.|.+.||+++..-|
T Consensus       424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NP  456 (598)
T KOG4158|consen  424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNP  456 (598)
T ss_pred             hcCCCCceeeccchhhhhhhhhhHHHHhccCCc
Confidence            5432      13589999999999999987654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.41  E-value=2.3e-13  Score=106.29  Aligned_cols=144  Identities=19%  Similarity=0.208  Sum_probs=113.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCC-cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSH-KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.-+.....-...  -|.++.+.|++ ..|..+.-+..+...-.+||+.+ |.||.++.+-...    .++.+..+.++
T Consensus        45 iK~Es~~a~hpqL~--yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R----~ftmkTvLMLa  117 (341)
T KOG1163|consen   45 IKLESSKAKHPQLL--YESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSR----RFTMKTVLMLA  117 (341)
T ss_pred             EEeecccCCCcchh--HHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhh----hhhHHhHHHHH
Confidence            77666555555566  89999999966 45555666666777788999988 7899998875543    68889999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-------------------------------ceecccCcccccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-------------------------------KLIGTFGFIAPECIT  201 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-------------------------------~~~g~~~y~aPE~~~  201 (227)
                      -|++.-++|+|   .++++||||||+|+|..-+.                               .+.||..|.+--...
T Consensus       118 DQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~  194 (341)
T KOG1163|consen  118 DQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHL  194 (341)
T ss_pred             HHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhh
Confidence            99999999999   99999999999999875432                               236888888777666


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +...+.+.|+=|+|-++...-.|..|
T Consensus       195 g~eqSRRDDmeSvgYvLmYfnrG~LP  220 (341)
T KOG1163|consen  195 GIEQSRRDDMESVGYVLMYFNRGSLP  220 (341)
T ss_pred             hhhhhhhhhhhhhcceeeeeecCCCc
Confidence            66678899999999998877777655

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.39  E-value=1.2e-12  Score=101.56  Aligned_cols=85  Identities=12%  Similarity=0.110  Sum_probs=66.3

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC-C
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS-R  168 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~-~  168 (227)
                      +|...+.++.|+++.....+...  ..++||||++++++........     +++......++.|++.++.++|   . .
T Consensus        68 ~E~~~l~~l~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~-----~~~~~~~~~i~~~l~~~l~~lH---~~~  137 (190)
T cd05145          68 KEFRNLKRLYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDV-----PLEEEEAEELYEQVVEQMRRLY---QEA  137 (190)
T ss_pred             HHHHHHHHHHhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhhc-----cCCHHHHHHHHHHHHHHHHHHH---HhC
Confidence            78899999999987554444332  3489999999875543322221     4667788899999999999999   7 9


Q ss_pred             CeEEecCCCCceeecC
Q 040292          169 PIVFRDIKPFTTHVND  184 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~  184 (227)
                      +++||||||+||++++
T Consensus       138 givHrDlkP~NIll~~  153 (190)
T cd05145         138 GLVHGDLSEYNILYHD  153 (190)
T ss_pred             CEecCCCChhhEEEEC
Confidence            9999999999999983

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.39  E-value=1.6e-12  Score=105.76  Aligned_cols=144  Identities=17%  Similarity=0.238  Sum_probs=117.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.-...+..-++.  -|.+..+.| ..+.|..+|-+-.++..-.||+|.+ |-||.|+..-.++    .++.+.+..++
T Consensus        58 IKfEPrkS~APQLr--dEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR----~FSvKTV~miA  130 (449)
T KOG1165|consen   58 IKFEPRKSEAPQLR--DEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGR----RFSVKTVAMIA  130 (449)
T ss_pred             EEeccccCCcchHH--HHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcC----cccHHhHHHHH
Confidence            66654444333455  777777777 6688888887666777778999988 7899998865554    78899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---------------------------------eecccCcccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---------------------------------LIGTFGFIAPEC  199 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---------------------------------~~g~~~y~aPE~  199 (227)
                      .|++.-++|+|   ++.++.|||||+|+||...+.                                 +.||..||+--.
T Consensus       131 ~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINT  207 (449)
T KOG1165|consen  131 KQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINT  207 (449)
T ss_pred             HHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeec
Confidence            99999999999   999999999999999986542                                 258888888877


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      -.+..-+.+.|+=|+|-++...+-|..|
T Consensus       208 HlGrEQSRRDDLEaLGHvFmYFLRGsLP  235 (449)
T KOG1165|consen  208 HLGREQSRRDDLEALGHVFMYFLRGSLP  235 (449)
T ss_pred             cccchhhhhhhHHHhhhhhhhhccCCCc
Confidence            7777888999999999999999988876

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.31  E-value=8.2e-13  Score=113.01  Aligned_cols=101  Identities=31%  Similarity=0.505  Sum_probs=85.1

Q ss_pred             cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------
Q 040292          115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------  188 (227)
Q Consensus       115 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------  188 (227)
                      ..|+.|++|.-.+|.+++..+...  ...++.....++.|++.|++|      ++.+|+|+||.||....+..+      
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~--e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg  401 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTG--EERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG  401 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcc--cccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence            367999999999999999743321  145566778899999999998      678999999999987665421      


Q ss_pred             ---------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh
Q 040292          189 ---------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT  223 (227)
Q Consensus       189 ---------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t  223 (227)
                                           +||..||+||.+.+..|+.++||||+|++++|+++
T Consensus       402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence                                 68999999999999999999999999999999986

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.27  E-value=2.5e-11  Score=95.27  Aligned_cols=83  Identities=22%  Similarity=0.267  Sum_probs=73.2

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+.++..+.|+++.....++...+..+++|||++|++|.+++....        + .+..++.+++.+|.++|   ..+
T Consensus        48 ~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~--------~-~~~~i~~~i~~~l~~lH---~~~  115 (211)
T PRK14879         48 REARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG--------M-EELELSREIGRLVGKLH---SAG  115 (211)
T ss_pred             HHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc--------H-HHHHHHHHHHHHHHHHH---hCC
Confidence            89999999999998887777777788899999999999999886421        2 67889999999999999   999


Q ss_pred             eEEecCCCCceeecC
Q 040292          170 IVFRDIKPFTTHVND  184 (227)
Q Consensus       170 i~H~dlkp~nil~~~  184 (227)
                      ++|+|++|.|++++.
T Consensus       116 i~H~Dl~p~Nil~~~  130 (211)
T PRK14879        116 IIHGDLTTSNMILSG  130 (211)
T ss_pred             cccCCCCcccEEEEC
Confidence            999999999999983

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.25  E-value=1.4e-11  Score=95.83  Aligned_cols=80  Identities=24%  Similarity=0.277  Sum_probs=67.5

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+.++..++|+++.....++...+..++||||++|++|.+++....     .       .++.+++.+|.++|   +.+
T Consensus        46 ~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~-----~-------~~~~~i~~~l~~lH---~~g  110 (199)
T TIGR03724        46 NEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN-----D-------ELLREIGRLVGKLH---KAG  110 (199)
T ss_pred             HHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH-----H-------HHHHHHHHHHHHHH---HCC
Confidence            89999999998876655555666777899999999999998875421     1       68889999999999   999


Q ss_pred             eEEecCCCCceeecC
Q 040292          170 IVFRDIKPFTTHVND  184 (227)
Q Consensus       170 i~H~dlkp~nil~~~  184 (227)
                      ++|+|++|.|++++.
T Consensus       111 i~H~Dl~~~Nil~~~  125 (199)
T TIGR03724       111 IVHGDLTTSNIIVRD  125 (199)
T ss_pred             eecCCCCcceEEEEC
Confidence            999999999999983

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.24  E-value=1.6e-11  Score=109.52  Aligned_cols=84  Identities=19%  Similarity=0.210  Sum_probs=73.4

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.++.+++|++++....++......++||||+++++|.+++.             ....++.+++.+|.+|| 
T Consensus       382 ~~~--~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH-  445 (535)
T PRK09605        382 RTR--AEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLH-  445 (535)
T ss_pred             HHH--HHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHH-
Confidence            455  99999999999999988888887778899999999999988774             24568899999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCC
Q 040292          165 GFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~  186 (227)
                        +.+++|||+||+||+++++.
T Consensus       446 --~~giiHrDlkp~NILl~~~~  465 (535)
T PRK09605        446 --KAGIVHGDLTTSNFIVRDDR  465 (535)
T ss_pred             --hCCCccCCCChHHEEEECCc
Confidence              99999999999999995443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.22  E-value=5e-12  Score=102.96  Aligned_cols=132  Identities=27%  Similarity=0.388  Sum_probs=105.7

Q ss_pred             HHHHhcCCCcccceeEEEEeeC-----CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292           92 IAFASQMSHKNILKFVGCCLET-----EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus        92 i~~l~~l~H~niv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                      +.-|-++.|-|||++..++.+.     .+..++.|||..|++..+|+.....+. .+......+|+-||+.||.|||.. 
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~-a~~~~~wkkw~tqIlsal~yLhs~-  195 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQK-ALFQKAWKKWCTQILSALSYLHSC-  195 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhh-hhhHHHHHHHHHHHHhhhhhhhcc-
Confidence            3456677899999999988653     356799999999999999986443332 456666778999999999999964 


Q ss_pred             CCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCCCCchhhHHHHHHHHHHH
Q 040292          167 SRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLEL  221 (227)
Q Consensus       167 ~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el  221 (227)
                      +.+++|+++..+.+.+..++.+                         .+-++|.+||+-...+.+..+|||+||....||
T Consensus       196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem  275 (458)
T KOG1266|consen  196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM  275 (458)
T ss_pred             CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence            8999999999988887755432                         356789999988877788899999999999998


Q ss_pred             HhCC
Q 040292          222 LTGK  225 (227)
Q Consensus       222 ~tg~  225 (227)
                      ..+.
T Consensus       276 ailE  279 (458)
T KOG1266|consen  276 AILE  279 (458)
T ss_pred             HHhe
Confidence            7653

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.21  E-value=7.1e-12  Score=102.18  Aligned_cols=107  Identities=23%  Similarity=0.351  Sum_probs=73.5

Q ss_pred             ceeEeecccCCChhhhhcC---CCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----
Q 040292          116 PILVFEFVACGTLADRIHD---PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----  188 (227)
Q Consensus       116 ~~lV~E~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----  188 (227)
                      .+++|+-+. ++|.+++..   .... ...+....+..+..|+++.+++||   ..+++|+||+|+|++++.+|.+    
T Consensus       114 ~~~l~P~~~-~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~  188 (288)
T PF14531_consen  114 RFLLMPRAQ-GDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGD  188 (288)
T ss_dssp             EEEEEE--S-EEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--
T ss_pred             hhhccchhh-hcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcC
Confidence            357788775 688776542   1111 113344455677789999999999   9999999999999999998865    


Q ss_pred             --------------ecccCccccccccCC--------CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 --------------IGTFGFIAPECITTG--------NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 --------------~g~~~y~aPE~~~~~--------~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                    ..+..|.+||.....        .++.+.|.|++|+++|.|.+|..|
T Consensus       189 F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP  249 (288)
T PF14531_consen  189 FSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP  249 (288)
T ss_dssp             GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred             hHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence                          133458888876432        367899999999999999999876

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.17  E-value=3.3e-11  Score=111.38  Aligned_cols=131  Identities=21%  Similarity=0.252  Sum_probs=106.5

Q ss_pred             cccchhHHHHHhcCC---CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHH
Q 040292           85 EYYCFNCIAFASQMS---HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAY  161 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~  161 (227)
                      +|.  =-..++.+|+   -+.|..+..+..-.+..+||+||.+.|+|.++++...     .++|.-.+.++.|+++-++.
T Consensus       737 EfY--I~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~-----~m~e~lv~~~~~qml~ive~  809 (974)
T KOG1166|consen  737 EFY--ICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNK-----VMDEYLVMFFSCQMLRIVEH  809 (974)
T ss_pred             eee--ehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccccHHHhhccCC-----CCCchhhhHHHHHHHHHHHH
Confidence            555  3444566665   2345555555566777899999999999999998443     68888999999999999999


Q ss_pred             hhhcCCCCeEEecCCCCceeecCCC------------------------------ceecccCccccccccCCCCCchhhH
Q 040292          162 LHVGFSRPIVFRDIKPFTTHVNDND------------------------------KLIGTFGFIAPECITTGNCNEKSDV  211 (227)
Q Consensus       162 LH~~~~~~i~H~dlkp~nil~~~~~------------------------------~~~g~~~y~aPE~~~~~~~~~~~Dv  211 (227)
                      ||   ..+|||+||||+|.++...-                              ...+|-.+-++|...+..++...|.
T Consensus       810 lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~Dy  886 (974)
T KOG1166|consen  810 LH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDY  886 (974)
T ss_pred             HH---hcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhh
Confidence            99   99999999999999885421                              0146677889999999999999999


Q ss_pred             HHHHHHHHHHHhCC
Q 040292          212 YSFGALLLELLTGK  225 (227)
Q Consensus       212 wS~G~il~el~tg~  225 (227)
                      |.+..+++-|+.|+
T Consensus       887 fGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  887 FGLAATVHVMLFGK  900 (974)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999886

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.11  E-value=1.5e-10  Score=92.90  Aligned_cols=86  Identities=10%  Similarity=0.183  Sum_probs=67.0

Q ss_pred             hHHHHHhcCCCccc--ceeEEEEeeCC----cceeEeecccC-CChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           90 NCIAFASQMSHKNI--LKFVGCCLETE----VPILVFEFVAC-GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        90 ~Ei~~l~~l~H~ni--v~l~g~~~~~~----~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      +|+.++.+++|+++  +..+++.....    ..++|+|+++| .+|.+++...      +++..    .+.+++.++.+|
T Consensus        89 rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~l  158 (239)
T PRK01723         89 AEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARF  158 (239)
T ss_pred             HHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHH
Confidence            89999999988775  67777654432    23599999997 6898887542      34433    356899999999


Q ss_pred             hhcCCCCeEEecCCCCceeecCCCce
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~~~  188 (227)
                      |   +.+|+||||||.||+++.++.+
T Consensus       159 H---~~GI~HrDlkp~NILv~~~~~v  181 (239)
T PRK01723        159 H---DAGVYHADLNAHNILLDPDGKF  181 (239)
T ss_pred             H---HCCCCCCCCCchhEEEcCCCCE
Confidence            9   9999999999999999876643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=1.3e-11  Score=110.77  Aligned_cols=132  Identities=22%  Similarity=0.359  Sum_probs=110.6

Q ss_pred             hHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhh-cCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC
Q 040292           90 NCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRI-HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS  167 (227)
Q Consensus        90 ~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l-~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~  167 (227)
                      .|..+-..+. |+|++.+++...+.+..+++++|..++++.+-+ ....    ...+......++.|+..++.|+|.  .
T Consensus        69 ~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~----~~~~~~~~~~~~~ql~s~l~~~H~--~  142 (601)
T KOG0590|consen   69 TETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDS----TGTSSSSASRYLPQLNSGLSYLHP--E  142 (601)
T ss_pred             ccccccccccccccccccCCccCCCcccccccCcccccccccccccCCc----cCCCCcchhhhhhhhccCccccCc--c
Confidence            6777777775 999999999999999999999999999999888 3322    123444567789999999999996  6


Q ss_pred             CCeEEecCCCCceeecCCC-ce------------------------ec-ccCccccccccCC-CCCchhhHHHHHHHHHH
Q 040292          168 RPIVFRDIKPFTTHVNDND-KL------------------------IG-TFGFIAPECITTG-NCNEKSDVYSFGALLLE  220 (227)
Q Consensus       168 ~~i~H~dlkp~nil~~~~~-~~------------------------~g-~~~y~aPE~~~~~-~~~~~~DvwS~G~il~e  220 (227)
                      .++.|+|+||+|.+++..+ .+                        +| ++.|+|||...+. ...+..|+||.|+++..
T Consensus       143 ~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~  222 (601)
T KOG0590|consen  143 NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSA  222 (601)
T ss_pred             cccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccc
Confidence            7899999999999998776 32                        68 9999999999875 45678899999999999


Q ss_pred             HHhCCCC
Q 040292          221 LLTGKKG  227 (227)
Q Consensus       221 l~tg~~p  227 (227)
                      +++|..|
T Consensus       223 ~~~g~~p  229 (601)
T KOG0590|consen  223 MLTGELP  229 (601)
T ss_pred             cccCCCC
Confidence            9999876

>smart00090 RIO RIO-like kinase

Probab=99.08  E-value=2.3e-10  Score=91.79  Aligned_cols=82  Identities=13%  Similarity=0.141  Sum_probs=63.6

Q ss_pred             hHHHHHhcCCCc--ccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC
Q 040292           90 NCIAFASQMSHK--NILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS  167 (227)
Q Consensus        90 ~Ei~~l~~l~H~--niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~  167 (227)
                      +|+.++.++.+.  .+.++++.    ...++||||+++.+|........     ++.......++.|++.++.+||   .
T Consensus        99 ~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH---~  166 (237)
T smart00090       99 KEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-----EPEEEEEFELYDDILEEMRKLY---K  166 (237)
T ss_pred             HHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC-----CcchHHHHHHHHHHHHHHHHHH---h
Confidence            799999999753  23444432    24589999999888876543222     3455566789999999999999   8


Q ss_pred             CC-eEEecCCCCceeec
Q 040292          168 RP-IVFRDIKPFTTHVN  183 (227)
Q Consensus       168 ~~-i~H~dlkp~nil~~  183 (227)
                      .+ ++||||||+||+++
T Consensus       167 ~g~iiH~Dikp~NIli~  183 (237)
T smart00090      167 EGELVHGDLSEYNILVH  183 (237)
T ss_pred             cCCEEeCCCChhhEEEE
Confidence            98 99999999999998

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.08  E-value=2.2e-10  Score=105.22  Aligned_cols=69  Identities=36%  Similarity=0.513  Sum_probs=62.0

Q ss_pred             HHHHHHhhhcCCCCeEEecCCCCceeecCCCc------------------------------------eecccCcccccc
Q 040292          156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------------------LIGTFGFIAPEC  199 (227)
Q Consensus       156 ~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~------------------------------------~~g~~~y~aPE~  199 (227)
                      +.+++|||   +.+|+|||+||+|.++..-|.                                    ++||+.|.|||+
T Consensus       153 vla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV  229 (1205)
T KOG0606|consen  153 VLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV  229 (1205)
T ss_pred             hHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence            78899999   999999999999999876432                                    279999999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +....|+..+|.|++|+++||.+-|+-|
T Consensus       230 ilrqgygkpvdwwamGiIlyeFLVgcvp  257 (1205)
T KOG0606|consen  230 ILRQGYGKPVDWWAMGIILYEFLVGCVP  257 (1205)
T ss_pred             hhhhccCCCccHHHHHHHHHHHheeeee
Confidence            9999999999999999999999887654

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.05  E-value=6.9e-10  Score=81.51  Aligned_cols=100  Identities=15%  Similarity=0.128  Sum_probs=78.2

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCC--cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSH--KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||..........+.  +|+.++..++|  +++++++++...++..++++||++++++..+            +......+
T Consensus        26 iK~~~~~~~~~~~~--~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~------------~~~~~~~~   91 (155)
T cd05120          26 LKINPSREKGADRE--REVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV------------SEEEKEDI   91 (155)
T ss_pred             EEecCCCCchhHHH--HHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC------------CHHHHHHH
Confidence            77765543334567  99999999976  5899999988888889999999988777543            33455678


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK  187 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~  187 (227)
                      +.+++.++..+|.....+++|+|++|.|+++++.+.
T Consensus        92 ~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~  127 (155)
T cd05120          92 AEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKI  127 (155)
T ss_pred             HHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcE
Confidence            889999999999432357999999999999987443

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.02  E-value=1.5e-09  Score=95.78  Aligned_cols=135  Identities=20%  Similarity=0.284  Sum_probs=99.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      |...+.....  +...  +.++-|+.++||||++++..+...+..|||+|.+.  .|..++..        +.......-
T Consensus        42 VF~~~~~~~~~~~~~~--~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--------l~~~~v~~G  109 (690)
T KOG1243|consen   42 VFVYKRSNGEVTELAK--RAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--------LGKEEVCLG  109 (690)
T ss_pred             EEEEeCCCchhhHHHH--HHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------hHHHHHHHH
Confidence            5555544441  2233  77889999999999999999999999999999984  77777764        334455567


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-ecccCcc--------------------ccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------APECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-~g~~~y~--------------------aPE~~~~~~~~~~~D  210 (227)
                      +.||+.||.+||+  +.+++|+++.-+.+.++..|.. .|...|.                    .|+.....  ....|
T Consensus       110 l~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s--~~s~D  185 (690)
T KOG1243|consen  110 LFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS--EWSID  185 (690)
T ss_pred             HHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc--ccchh
Confidence            8899999999986  7799999999999999988754 2332222                    22211110  12359


Q ss_pred             HHHHHHHHHHHHhC
Q 040292          211 VYSFGALLLELLTG  224 (227)
Q Consensus       211 vwS~G~il~el~tg  224 (227)
                      .|-|||+++|++.|
T Consensus       186 ~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  186 SWGLGCLIEELFNG  199 (690)
T ss_pred             hhhHHHHHHHHhCc
Confidence            99999999999998

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.84  E-value=4.2e-09  Score=82.04  Aligned_cols=81  Identities=17%  Similarity=0.179  Sum_probs=63.3

Q ss_pred             hHHHHHhcCCCcc--cceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC
Q 040292           90 NCIAFASQMSHKN--ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS  167 (227)
Q Consensus        90 ~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~  167 (227)
                      +|+.++.++.|++  +...++    ....++||||+++++|.+....           .....++.+++.++.++|   .
T Consensus        82 ~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh---~  143 (198)
T cd05144          82 KEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAY---K  143 (198)
T ss_pred             HHHHHHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHH---H
Confidence            7888999997774  444443    2456899999999988765421           224568889999999999   8


Q ss_pred             CCeEEecCCCCceeecCCCce
Q 040292          168 RPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       168 ~~i~H~dlkp~nil~~~~~~~  188 (227)
                      .+++||||+|+|++++.++.+
T Consensus       144 ~gi~H~Dl~p~Nill~~~~~~  164 (198)
T cd05144         144 HGIIHGDLSEFNILVDDDEKI  164 (198)
T ss_pred             CCCCcCCCCcccEEEcCCCcE
Confidence            999999999999999876644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.75  E-value=4.8e-09  Score=96.67  Aligned_cols=119  Identities=22%  Similarity=0.299  Sum_probs=94.7

Q ss_pred             cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCce
Q 040292          101 KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTT  180 (227)
Q Consensus       101 ~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~ni  180 (227)
                      |-+++..-.+....+.+|+++|+.+++|...++..+     +.+..........+.+++++||   ...+.|+|++|.|.
T Consensus       864 P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~  935 (1205)
T KOG0606|consen  864 PAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSG-----CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSL  935 (1205)
T ss_pred             CceecccCCCCCCCCcchhhHHhccCCchhhhhcCC-----CcccccccchhHHHHhhhhccc---cchhhcccccccch
Confidence            444443333344567899999999999999888765     4455556667778889999999   77799999999988


Q ss_pred             eecCCCc----------------------------------------------------eecccCccccccccCCCCCch
Q 040292          181 HVNDNDK----------------------------------------------------LIGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       181 l~~~~~~----------------------------------------------------~~g~~~y~aPE~~~~~~~~~~  208 (227)
                      +...++.                                                    .+||+.|.+||...+......
T Consensus       936 l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ 1015 (1205)
T KOG0606|consen  936 LIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSA 1015 (1205)
T ss_pred             hhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCc
Confidence            7643221                                                    158889999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|.|++|++++|.++|.+|
T Consensus      1016 ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 1016 ADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred             chhhhhhhhhhhhhcCCCC
Confidence            9999999999999999886

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.69  E-value=2.3e-08  Score=76.89  Aligned_cols=80  Identities=15%  Similarity=0.214  Sum_probs=55.0

Q ss_pred             hHHHHHhcCCCc--ccceeEEEEeeCCcceeEeecccCCChhhh-hcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292           90 NCIAFASQMSHK--NILKFVGCCLETEVPILVFEFVACGTLADR-IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus        90 ~Ei~~l~~l~H~--niv~l~g~~~~~~~~~lV~E~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                      .|...+.++.+.  .+.+.+++    ...++||||++++++... +...      ... .....++.+++.++.++|   
T Consensus        66 ~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~------~~~-~~~~~~~~~~~~~l~~lh---  131 (187)
T cd05119          66 KEFRNLKRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV------RLL-EDPEELYDQILELMRKLY---  131 (187)
T ss_pred             HHHHHHHHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhh------hhc-ccHHHHHHHHHHHHHHHh---
Confidence            455555555333  23444433    346899999998654321 1111      011 556788999999999999   


Q ss_pred             C-CCeEEecCCCCceeec
Q 040292          167 S-RPIVFRDIKPFTTHVN  183 (227)
Q Consensus       167 ~-~~i~H~dlkp~nil~~  183 (227)
                      . .+++|+||+|+|++++
T Consensus       132 ~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119         132 REAGLVHGDLSEYNILVD  149 (187)
T ss_pred             hccCcCcCCCChhhEEEE
Confidence            7 9999999999999998

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.62  E-value=1.2e-07  Score=73.62  Aligned_cols=86  Identities=12%  Similarity=0.156  Sum_probs=62.2

Q ss_pred             chhHHHHHhcCCC--cccceeEEEEeeCCcceeEeecccCCChhh-hhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh-h
Q 040292           88 CFNCIAFASQMSH--KNILKFVGCCLETEVPILVFEFVACGTLAD-RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL-H  163 (227)
Q Consensus        88 ~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L-H  163 (227)
                      +.+|+..|+++..  -++...+++    ...++||||+.+..+.. .+...      .++......+..+++.+|..+ |
T Consensus        73 a~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~------~~~~~~~~~i~~~i~~~l~~l~H  142 (197)
T cd05146          73 AEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA------KLNDEEMKNAYYQVLSMMKQLYK  142 (197)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc------ccCHHHHHHHHHHHHHHHHHHHH
Confidence            3489999999943  466666654    56789999997643322 22211      234445667788999999988 7


Q ss_pred             hcCCCCeEEecCCCCceeecCCC
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                         ..+++|+||++.||+++++.
T Consensus       143 ---~~glVHGDLs~~NIL~~~~~  162 (197)
T cd05146         143 ---ECNLVHADLSEYNMLWHDGK  162 (197)
T ss_pred             ---hCCeecCCCCHHHEEEECCc
Confidence               88999999999999997544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.52  E-value=9.1e-08  Score=83.55  Aligned_cols=131  Identities=21%  Similarity=0.255  Sum_probs=106.1

Q ss_pred             ccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHH----HHH
Q 040292           86 YYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN----AVA  160 (227)
Q Consensus        86 ~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~----gl~  160 (227)
                      +.-.+|+.....+ .|+|.++.+..+...+..++-+|++. .+|.++......    .++.........+..+    |+.
T Consensus       162 ~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~----~~p~~~l~~~~~~~~~~~~~al~  236 (524)
T KOG0601|consen  162 KRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCN----FLPDNLLWNSLRDWLSRDVTALS  236 (524)
T ss_pred             ccccchhhcccccCccccccccCcccccCCcceeeecccc-chhHHhhhcccc----cCCchhhhhHHhhhhhccccccc
Confidence            3334888888888 79999999999999999999999985 788888876553    3556667777778888    999


Q ss_pred             HhhhcCCCCeEEecCCCCceeecCC-Cce--------------------------ecccCccccccccCCCCCchhhHHH
Q 040292          161 YLHVGFSRPIVFRDIKPFTTHVNDN-DKL--------------------------IGTFGFIAPECITTGNCNEKSDVYS  213 (227)
Q Consensus       161 ~LH~~~~~~i~H~dlkp~nil~~~~-~~~--------------------------~g~~~y~aPE~~~~~~~~~~~DvwS  213 (227)
                      ++|   ..+++|-|+||.|+....+ ...                          .|...|++||... +.++..+|+||
T Consensus       237 ~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~s  312 (524)
T KOG0601|consen  237 HLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFS  312 (524)
T ss_pred             ccC---CCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcc
Confidence            999   9999999999999998876 221                          2555699999775 45688999999


Q ss_pred             HHHHHHHHHhCC
Q 040292          214 FGALLLELLTGK  225 (227)
Q Consensus       214 ~G~il~el~tg~  225 (227)
                      +|.+..+..++.
T Consensus       313 l~ev~l~~~l~~  324 (524)
T KOG0601|consen  313 LGEVILEAILGS  324 (524)
T ss_pred             hhhhhHhhHhhc
Confidence            999999988764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.47  E-value=5e-08  Score=85.12  Aligned_cols=133  Identities=18%  Similarity=0.235  Sum_probs=102.2

Q ss_pred             cccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhh
Q 040292           85 EYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH  163 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH  163 (227)
                      +...+.|+-+...+ .|.++++++..+.+....|+-.||+.++++...+...     +-+++..++.+..|++.++.++|
T Consensus       309 di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~-----~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  309 DIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTS-----QMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             hhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHH-----HhcCcchhhhhHHHHHhcccccc
Confidence            34445677766666 7999999988888888888999999999887665221     25677788999999999999999


Q ss_pred             hcCCCCeEEecCCCCceeecCCCce-------e------------cccCcc--ccccccCCCCCchhhHHHHHHHHHHHH
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDNDKL-------I------------GTFGFI--APECITTGNCNEKSDVYSFGALLLELL  222 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~~~-------~------------g~~~y~--aPE~~~~~~~~~~~DvwS~G~il~el~  222 (227)
                         .+.++|+|++|+||++..++..       +            +.-++.  ++.......+..+.|++|||..+.+.+
T Consensus       384 ---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~  460 (524)
T KOG0601|consen  384 ---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAI  460 (524)
T ss_pred             ---chhhhcccccccceeeccchhhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccc
Confidence               9999999999999999885311       1            111233  444445556788999999999888888


Q ss_pred             hCC
Q 040292          223 TGK  225 (227)
Q Consensus       223 tg~  225 (227)
                      +|.
T Consensus       461 ~~~  463 (524)
T KOG0601|consen  461 TGS  463 (524)
T ss_pred             cCc
Confidence            775

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.46  E-value=4.9e-07  Score=68.18  Aligned_cols=92  Identities=20%  Similarity=0.131  Sum_probs=63.5

Q ss_pred             eEEEcCCCC-cccccchhHHHHHhcCCCcccc-eeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLN-TEEYYCFNCIAFASQMSHKNIL-KFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv-~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|....... ...+.  +|+.++..+.+.+++ +++.+.  ....++||||++|.++.+.-         ..    ...+
T Consensus        26 lK~~~~~~~~~~~~~--~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~~---------~~----~~~~   88 (170)
T cd05151          26 VRIPGNGTELLINRE--NEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTED---------FS----DPEN   88 (170)
T ss_pred             EEeCCCCcccccCHH--HHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcccccc---------cc----CHHH
Confidence            666554432 23456  899999998655544 455443  33458999999998876430         01    1235


Q ss_pred             HHHHHHHHHHhhhcCCCC-----eEEecCCCCceeecCC
Q 040292          152 AMEIANAVAYLHVGFSRP-----IVFRDIKPFTTHVNDN  185 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~-----i~H~dlkp~nil~~~~  185 (227)
                      +.+++++|..||   ..+     ++|+|++|.|++++.+
T Consensus        89 ~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~~~  124 (170)
T cd05151          89 LEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLDDG  124 (170)
T ss_pred             HHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEECC
Confidence            678999999999   665     5999999999999843

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.35  E-value=3.7e-06  Score=73.04  Aligned_cols=145  Identities=16%  Similarity=0.227  Sum_probs=100.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEee----CCcceeEeecccC-CChhhhhcCCC-CC-------
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVAC-GTLADRIHDPN-GS-------  138 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~-gsL~~~l~~~~-~~-------  138 (227)
                      .|+++.....  ..-.  .-++..+++.|+|+|++.+++..    +...+||++|.|+ ++|.+.-.... +.       
T Consensus       306 LkRlhg~r~~~~nk~t--~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~  383 (655)
T KOG3741|consen  306 LKRLHGDRDQSTNKDT--SLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFY  383 (655)
T ss_pred             eeeeccccccCcccch--HHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCcccccccccc
Confidence            6777443332  1122  45778999999999999998873    3467899999986 57777543221 11       


Q ss_pred             --CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee-cccCccccccccCCC-----CCchhh
Q 040292          139 --QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI-GTFGFIAPECITTGN-----CNEKSD  210 (227)
Q Consensus       139 --~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~-g~~~y~aPE~~~~~~-----~~~~~D  210 (227)
                        +....++...+.++.|+..||.++|   +.++.-+-|.|.+|+++.+.++. ...+.+  +++....     -..+-|
T Consensus       384 ~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~--Dvl~~d~~~~le~~Qq~D  458 (655)
T KOG3741|consen  384 PSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIM--DVLQEDPTEPLESQQQND  458 (655)
T ss_pred             ccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccce--eeecCCCCcchhHHhhhh
Confidence              1124678889999999999999999   88888899999999997664431 111222  2222111     134679


Q ss_pred             HHHHHHHHHHHHhCC
Q 040292          211 VYSFGALLLELLTGK  225 (227)
Q Consensus       211 vwS~G~il~el~tg~  225 (227)
                      .-.||.+++.|.||.
T Consensus       459 ~~~lG~ll~aLAt~~  473 (655)
T KOG3741|consen  459 LRDLGLLLLALATGT  473 (655)
T ss_pred             HHHHHHHHHHHhhcc
Confidence            999999999999984

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.31  E-value=1.9e-06  Score=70.30  Aligned_cols=89  Identities=16%  Similarity=0.050  Sum_probs=66.4

Q ss_pred             hHHHHHhcCCCcc--cceeEEEEee-----CCcceeEeecccCC-ChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHH
Q 040292           90 NCIAFASQMSHKN--ILKFVGCCLE-----TEVPILVFEFVACG-TLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAY  161 (227)
Q Consensus        90 ~Ei~~l~~l~H~n--iv~l~g~~~~-----~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~  161 (227)
                      +|...+.++...+  .....++...     ....+||+|++++- +|.+++.....   .+.+......++.+++..+.-
T Consensus        77 rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~---~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         77 REWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWAT---NPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcc---cCCCHHHHHHHHHHHHHHHHH
Confidence            8988888884333  3344445433     23478999999875 78888753211   134556677899999999999


Q ss_pred             hhhcCCCCeEEecCCCCceeecC
Q 040292          162 LHVGFSRPIVFRDIKPFTTHVND  184 (227)
Q Consensus       162 LH~~~~~~i~H~dlkp~nil~~~  184 (227)
                      ||   ..+++|+|+++.||+++.
T Consensus       154 LH---~~Gi~HgDL~~~NiLl~~  173 (268)
T PRK15123        154 MH---AAGINHRDCYICHFLLHL  173 (268)
T ss_pred             HH---HCcCccCCCChhhEEEec
Confidence            99   999999999999999975

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.30  E-value=1.4e-06  Score=66.23  Aligned_cols=93  Identities=14%  Similarity=0.091  Sum_probs=67.8

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccC-CChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVAC-GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      +|+++|.++.--.|.--.=++.+...-.++|||++| .++.+++.+....   +...+....++..+-+.+.-||   ++
T Consensus        59 ~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH---~n  132 (229)
T KOG3087|consen   59 QEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLH---DN  132 (229)
T ss_pred             HHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhh---hC
Confidence            899999888544443333345566667799999986 3778877654321   1222223678888999999999   99


Q ss_pred             CeEEecCCCCceeecCCCce
Q 040292          169 PIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~~~  188 (227)
                      .++|+||..+|+++.+++..
T Consensus       133 diiHGDLTTSNill~~~~~~  152 (229)
T KOG3087|consen  133 DIIHGDLTTSNILLRSDGNQ  152 (229)
T ss_pred             CeecccccccceEEecCCCc
Confidence            99999999999999877654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.28  E-value=3.2e-06  Score=66.38  Aligned_cols=89  Identities=17%  Similarity=0.151  Sum_probs=68.8

Q ss_pred             hHHHHHhcCCCc--ccceeEEEEeeCC----cceeEeecccCC-ChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           90 NCIAFASQMSHK--NILKFVGCCLETE----VPILVFEFVACG-TLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        90 ~Ei~~l~~l~H~--niv~l~g~~~~~~----~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      +|...+.++...  .+.+.+++.....    ..++|+|++++. +|.+++....     ..+......++.+++..+.-|
T Consensus        60 ~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~~i~~l  134 (206)
T PF06293_consen   60 REWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALARLIAKL  134 (206)
T ss_pred             HHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHHHHHHH
Confidence            888887777433  3455666665532    357999999874 7888887532     244556778999999999999


Q ss_pred             hhcCCCCeEEecCCCCceeecCCC
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                      |   ..+++|+|++|.|||++.++
T Consensus       135 H---~~gi~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  135 H---DAGIYHGDLNPSNILVDPDD  155 (206)
T ss_pred             H---HCcCCCCCCCcccEEEeCCC
Confidence            9   99999999999999999876

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.22  E-value=3.3e-06  Score=64.29  Aligned_cols=84  Identities=14%  Similarity=0.210  Sum_probs=64.0

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+.++.++.---|..-+=+..+.+...++|||++|..|.+.+...            ...++..+-.-+.-||   ..+
T Consensus        48 ~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH---~~g  112 (204)
T COG3642          48 REARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA------------RPDLLREVGRLVGKLH---KAG  112 (204)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc------------chHHHHHHHHHHHHHH---hcC
Confidence            8999998885443333333445667778999999988888888753            1346667777788899   999


Q ss_pred             eEEecCCCCceeecCCCce
Q 040292          170 IVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~  188 (227)
                      |+|+||.++|++++..+..
T Consensus       113 ivHGDLTtsNiIl~~~~i~  131 (204)
T COG3642         113 IVHGDLTTSNIILSGGRIY  131 (204)
T ss_pred             eecCCCccceEEEeCCcEE
Confidence            9999999999999877644

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.21  E-value=1.8e-06  Score=75.39  Aligned_cols=89  Identities=17%  Similarity=0.149  Sum_probs=58.2

Q ss_pred             hHHHHHhcC----CCcccceeEEEEe-eCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHH-HHHHhh
Q 040292           90 NCIAFASQM----SHKNILKFVGCCL-ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN-AVAYLH  163 (227)
Q Consensus        90 ~Ei~~l~~l----~H~niv~l~g~~~-~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~-gl~~LH  163 (227)
                      +|...+.++    +|.+-+.+-..+. .....+|||||++|++|.+.......    ..   ....++..++. .+..+|
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~----~~---~~~~ia~~~~~~~l~ql~  274 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA----GL---DRKALAENLARSFLNQVL  274 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc----CC---CHHHHHHHHHHHHHHHHH
Confidence            666666555    2333333333332 24467899999999999887643210    11   13345555555 467788


Q ss_pred             hcCCCCeEEecCCCCceeecCCCce
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~~~  188 (227)
                         ..+++|+|++|.|+++++++.+
T Consensus       275 ---~~g~~H~D~hPgNilv~~~g~i  296 (437)
T TIGR01982       275 ---RDGFFHADLHPGNIFVLKDGKI  296 (437)
T ss_pred             ---hCCceeCCCCcccEEECCCCcE
Confidence               8999999999999999887654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.14  E-value=6.5e-06  Score=63.58  Aligned_cols=84  Identities=15%  Similarity=0.166  Sum_probs=55.4

Q ss_pred             hHHHHHhcCCCc--ccceeEEEEeeCCcceeEeeccc--CCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHH-hhh
Q 040292           90 NCIAFASQMSHK--NILKFVGCCLETEVPILVFEFVA--CGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAY-LHV  164 (227)
Q Consensus        90 ~Ei~~l~~l~H~--niv~l~g~~~~~~~~~lV~E~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~-LH~  164 (227)
                      +|...|.++..-  ++.+++++.    ..++||||++  |..+..+...       .++......++.+++..+.. +| 
T Consensus        57 ~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~~-------~~~~~~~~~~~~~il~~~~~~~~-  124 (188)
T PF01163_consen   57 KEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKDV-------DLSPEEPKELLEEILEEIIKMLH-  124 (188)
T ss_dssp             HHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHHC-------GGGGSTHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHhc-------cccchhHHHHHHHHHHHHHHHHH-
Confidence            899999999665  566666542    4579999998  5455443332       12233456677778775554 57 


Q ss_pred             cCCCCeEEecCCCCceeecCCCc
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDK  187 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~  187 (227)
                        ..+++|+||.+.||+++++..
T Consensus       125 --~~givHGDLs~~NIlv~~~~~  145 (188)
T PF01163_consen  125 --KAGIVHGDLSEYNILVDDGKV  145 (188)
T ss_dssp             --CTTEEESS-STTSEEEETTCE
T ss_pred             --hcCceecCCChhhEEeecceE
Confidence              899999999999999987743

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.12  E-value=1.8e-05  Score=62.06  Aligned_cols=82  Identities=18%  Similarity=0.222  Sum_probs=57.3

Q ss_pred             eEEEcCCCC---cccccchhHHHHHhcCCC--cccceeEEEEeeCC---cceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLN---TEEYYCFNCIAFASQMSH--KNILKFVGCCLETE---VPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~---~~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~---~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      +|.......   ...+.  +|+.+++.+.+  .++.+++.+.....   ..++||||++|.++.+.+.. .     .++.
T Consensus        27 lK~~~~~~~~~~~~~~~--~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~-----~~~~   98 (223)
T cd05154          27 LRRPPPGALLPSAHDVA--REYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-P-----ELSP   98 (223)
T ss_pred             EEeCCCcccCcccccHH--HHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-C-----CCCH
Confidence            666554332   24566  99999999965  44677787776542   56899999999888775532 1     4556


Q ss_pred             HHHHHHHHHHHHHHHHhh
Q 040292          146 KHRLKVAMEIANAVAYLH  163 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH  163 (227)
                      .....++.++++.|..||
T Consensus        99 ~~~~~i~~~i~~~l~~lH  116 (223)
T cd05154          99 EERRALARALADTLAALH  116 (223)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            666777778888887777

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.96  E-value=2.5e-05  Score=66.57  Aligned_cols=109  Identities=22%  Similarity=0.271  Sum_probs=81.5

Q ss_pred             ceeEeecccCC-ChhhhhcCC-CCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----
Q 040292          116 PILVFEFVACG-TLADRIHDP-NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----  188 (227)
Q Consensus       116 ~~lV~E~~~~g-sL~~~l~~~-~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----  188 (227)
                      .-+.|..+++. ...+++... ...+.....|+-.++.++.++.+.+-||   ..+.+-+|+.++|+|+++++.+     
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVds  161 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDS  161 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcc
Confidence            34677777654 233333321 1222335789999999999999999999   8899999999999999887543     


Q ss_pred             ---------------ecccCccccccccCC-----CCCchhhHHHHHHHHHHHHhC-CCC
Q 040292          189 ---------------IGTFGFIAPECITTG-----NCNEKSDVYSFGALLLELLTG-KKG  227 (227)
Q Consensus       189 ---------------~g~~~y~aPE~~~~~-----~~~~~~DvwS~G~il~el~tg-~~p  227 (227)
                                     +|...|++||.-.-.     .-+...|.+.+|+++++++.| +.|
T Consensus       162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHP  221 (637)
T COG4248         162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHP  221 (637)
T ss_pred             cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCC
Confidence                           578889999976422     345778999999999999887 554

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.83  E-value=0.00011  Score=56.84  Aligned_cols=93  Identities=24%  Similarity=0.299  Sum_probs=71.0

Q ss_pred             hHHHHHhcCCC-cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC
Q 040292           90 NCIAFASQMSH-KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR  168 (227)
Q Consensus        90 ~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~  168 (227)
                      +|..+|+.+++ +++.+++|+|-    .++|.||...+++.......  .+.-..+|..+..++.++++.+.+++++...
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l--~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~   81 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPL--SQFLQSPWEQRAKIALQLLELLEELDHGPLG   81 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCcccccccccc--ccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            78899999966 69999999993    36799999877664321000  0001458999999999999999999976556


Q ss_pred             CeEEecCCCCceeecCCCce
Q 040292          169 PIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       169 ~i~H~dlkp~nil~~~~~~~  188 (227)
                      .+.-.|++|+|+-+++++.+
T Consensus        82 ~~~lcDv~~~nfgv~~~~~l  101 (188)
T PF12260_consen   82 FFYLCDVSPDNFGVNDDGRL  101 (188)
T ss_pred             cEEEeecchHHeEEeCCCcE
Confidence            67778999999999987654

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.80  E-value=2.2e-05  Score=69.94  Aligned_cols=86  Identities=13%  Similarity=0.121  Sum_probs=50.9

Q ss_pred             hHHHHHhcCC----CcccceeEEEEee-CCcceeEeecccCCChhhhh--cCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           90 NCIAFASQMS----HKNILKFVGCCLE-TEVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        90 ~Ei~~l~~l~----H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l--~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      +|+..+.++.    +.+.+.+-.++.+ ....+|||||++|+++.++-  ...+ .....+.......++.|+       
T Consensus       205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g-~d~~~la~~~v~~~~~Qi-------  276 (537)
T PRK04750        205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG-TDMKLLAERGVEVFFTQV-------  276 (537)
T ss_pred             HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC-CCHHHHHHHHHHHHHHHH-------
Confidence            5665555552    4444444444432 45678999999999997742  2211 011122222222333333       


Q ss_pred             hhcCCCCeEEecCCCCceeecCCC
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                      .   ..+++|+|++|.||+++.++
T Consensus       277 f---~~GffHaDpHPGNIlv~~~g  297 (537)
T PRK04750        277 F---RDGFFHADMHPGNIFVSYDP  297 (537)
T ss_pred             H---hCCeeeCCCChHHeEEecCC
Confidence            3   56899999999999999876

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.72  E-value=3.9e-06  Score=74.88  Aligned_cols=72  Identities=31%  Similarity=0.505  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------ecccCcccccccc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------~g~~~y~aPE~~~  201 (227)
                      +.+++.|+.|+|.  +..++|++|.|++|.++.++..                              .-...|.|||++.
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            4456699999997  7799999999999999877632                              1223499999998


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~  225 (227)
                      ....+.++|++|+|+++|.+..|.
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~g  206 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGG  206 (700)
T ss_pred             cccccccccceeeeeEEEEEecCC
Confidence            877889999999999988877444

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.71  E-value=7.8e-06  Score=72.72  Aligned_cols=127  Identities=17%  Similarity=0.158  Sum_probs=88.9

Q ss_pred             hHHHHHhcCCCcc-cceeEEEEeeCCcceeEeecccCC-ChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCC
Q 040292           90 NCIAFASQMSHKN-ILKFVGCCLETEVPILVFEFVACG-TLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFS  167 (227)
Q Consensus        90 ~Ei~~l~~l~H~n-iv~l~g~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~  167 (227)
                      -++++|.+++||| .+..++-+..+...+++++++.++ +-........    -.+..-+...+.+.-.++++++|   +
T Consensus       282 l~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se----~~~~~~~~~~~~r~et~~l~~l~---~  354 (829)
T KOG0576|consen  282 LAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSE----IALEQYQFAYPLRKETRPLAELH---S  354 (829)
T ss_pred             HHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCChhh----Hhhhhhhhhhhhhhhcccccccc---c
Confidence            5788999999999 777777777778889999999876 3222221110    02222233445566678899999   5


Q ss_pred             CCeEEecCCCCceeecCC-------------------CceecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          168 RPIVFRDIKPFTTHVNDN-------------------DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       168 ~~i~H~dlkp~nil~~~~-------------------~~~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      -.=+|+|    |++..+.                   ....+++.|+|||+.....+..+.|+|+.+.--.++..|-+|
T Consensus       355 ~~~~~~d----~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP  429 (829)
T KOG0576|consen  355 SYKVHRD----NILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP  429 (829)
T ss_pred             ccccCcc----cccccccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence            5457887    4444332                   123688899999999999999999999999876677666655

>PRK09902 hypothetical protein; Provisional

Probab=97.64  E-value=0.00022  Score=55.94  Aligned_cols=94  Identities=17%  Similarity=0.037  Sum_probs=69.3

Q ss_pred             ccccchhHHHHHhcCCC--cccceeEEEEe-eC----CcceeEeecccC-CChhhhhcCCCCCCCcccCHHHHHHHHHHH
Q 040292           84 EEYYCFNCIAFASQMSH--KNILKFVGCCL-ET----EVPILVFEFVAC-GTLADRIHDPNGSQLEPFLMKHRLKVAMEI  155 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~H--~niv~l~g~~~-~~----~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i  155 (227)
                      ..|.  +|+..|.++..  -++.+.. ++. ..    ...+||+|-+++ -+|.+++....-   .+.+...+..+..++
T Consensus        64 ptf~--rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~---~~~~~~~k~~il~~v  137 (216)
T PRK09902         64 PTIV--REVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAV---SPYSDEVRQAMLKAV  137 (216)
T ss_pred             hHHH--HHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCc---CCcchHHHHHHHHHH
Confidence            4567  99999988843  2344444 332 21    246799998864 488888754321   145677788999999


Q ss_pred             HHHHHHhhhcCCCCeEEecCCCCceeecCCC
Q 040292          156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       156 ~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                      +..+.-||   +.++.|+|+.+.||+++.++
T Consensus       138 a~~ia~LH---~~Gv~Hgdly~khIll~~~g  165 (216)
T PRK09902        138 ALAFKKMH---SVNRQHGCCYVRHIYVKTEG  165 (216)
T ss_pred             HHHHHHHH---HCCCcCCCCCHhheeecCCC
Confidence            99999999   99999999999999998555

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.63  E-value=7.8e-05  Score=60.24  Aligned_cols=84  Identities=14%  Similarity=0.152  Sum_probs=58.5

Q ss_pred             chhHHHHHhcCCCc--ccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           88 CFNCIAFASQMSHK--NILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        88 ~~~Ei~~l~~l~H~--niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      |.+|+.+|.+|...  .+.+.+++    +..++|||+++|-.|...-          ++....-.++..|+.-+.-.-  
T Consensus       156 A~rEf~~L~~L~~~G~~VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~--  219 (304)
T COG0478         156 AEREFEALQRLYPEGVKVPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAY--  219 (304)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHH--
Confidence            55899999999654  56665543    5668999999986655322          122333445555666555555  


Q ss_pred             CCCCeEEecCCCCceeecCCCce
Q 040292          166 FSRPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~~~~~~  188 (227)
                       ..+++|+|+++.||++++++..
T Consensus       220 -~~GiVHGDlSefNIlV~~dg~~  241 (304)
T COG0478         220 -RRGIVHGDLSEFNILVTEDGDI  241 (304)
T ss_pred             -HcCccccCCchheEEEecCCCE
Confidence             6789999999999999998654

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.37  E-value=0.00024  Score=56.02  Aligned_cols=58  Identities=22%  Similarity=0.228  Sum_probs=44.9

Q ss_pred             cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce
Q 040292          115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       115 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~  188 (227)
                      ..+++|||++|..|.+...         +++    .+...+.+++.-+|   ..++.|+|..|.|+++++++..
T Consensus       117 ~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~i~  174 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNGIR  174 (229)
T ss_pred             EEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCcEE
Confidence            4568999999988876542         222    24456777899999   9999999999999999977643

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.99  E-value=0.0024  Score=49.80  Aligned_cols=88  Identities=23%  Similarity=0.282  Sum_probs=61.8

Q ss_pred             ccccchhHHHHHhcCC------CcccceeEEEEeeCCcceeEeecccC------CChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           84 EEYYCFNCIAFASQMS------HKNILKFVGCCLETEVPILVFEFVAC------GTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~------H~niv~l~g~~~~~~~~~lV~E~~~~------gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      .++.  +|+....++.      +.+|.+++|+..++-..-+|+|.+.+      -+|.+++...      .++. .....
T Consensus        56 ~~~~--~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~------~~~~-~~~~~  126 (199)
T PF10707_consen   56 RQNR--RELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG------GLTE-ELRQA  126 (199)
T ss_pred             HHHH--HHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC------CccH-HHHHH
Confidence            4555  7877666665      78899999999998888999998743      3567777432      2333 22222


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                         +-+-..||-   +..|+.+|++|.||++....
T Consensus       127 ---L~~f~~~l~---~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen  127 ---LDEFKRYLL---DHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             ---HHHHHHHHH---HcCCeecCCCcccEEEEecC
Confidence               233445666   77899999999999997654

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.81  E-value=0.0097  Score=47.37  Aligned_cols=52  Identities=6%  Similarity=0.025  Sum_probs=35.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCc--ccceeEEEEeeCCcceeEeecccCCC
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHK--NILKFVGCCLETEVPILVFEFVACGT  127 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~--niv~l~g~~~~~~~~~lV~E~~~~gs  127 (227)
                      +|............  +|.++++.+..-  .+.+.+++....+...+|||+++|.+
T Consensus        27 lR~~~~~~~~~~i~--~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172        27 LKLYNPGFDKETIK--REFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             EEeCCCCCCHHHHH--HHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            45544433334455  999999888533  34677888777777889999998853

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=96.79  E-value=0.0087  Score=47.88  Aligned_cols=54  Identities=9%  Similarity=-0.086  Sum_probs=37.3

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhh
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLAD  130 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~  130 (227)
                      ||...... ..+..  +|+.++..+ .+--+.+++++....+..++|||+++|.++.+
T Consensus        27 vk~~~~~~-~~~~~--~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~   81 (244)
T cd05150          27 LKIAPSGP-TYELE--REAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA   81 (244)
T ss_pred             EEecCCCc-ccchH--HHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence            55544332 33455  899988888 34446677887776667889999999877754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.50  E-value=0.011  Score=56.64  Aligned_cols=129  Identities=17%  Similarity=0.188  Sum_probs=86.1

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCc----ceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEV----PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~----~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      -|+..+....|+|++.++++-.+...    ..+..|+++.-++...+..-.     ..+....+.+..++..||.|+|  
T Consensus       231 ~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~-----~i~~~~~r~~~~~~~~GL~~~h--  303 (1351)
T KOG1035|consen  231 IELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG-----SIPLETLRILHQKLLEGLAYLH--  303 (1351)
T ss_pred             HHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc-----ccCHHHHHHHHHHHhhhHHHHH--
Confidence            56778889999999999988766432    224457888778887777654     6778888899999999999999  


Q ss_pred             CCCCeEEecCCCC---ceeecCCCce----------------------ecccCccccccccCCCC--CchhhHHHHHHHH
Q 040292          166 FSRPIVFRDIKPF---TTHVNDNDKL----------------------IGTFGFIAPECITTGNC--NEKSDVYSFGALL  218 (227)
Q Consensus       166 ~~~~i~H~dlkp~---nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~--~~~~DvwS~G~il  218 (227)
                       +....|.-+..+   +-..+..+..                      ..+..|.++|.......  +...|+|.+|...
T Consensus       304 -~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~  382 (1351)
T KOG1035|consen  304 -SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL  382 (1351)
T ss_pred             -HhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence             554444433322   1111111110                      22334666666654443  3457999999999


Q ss_pred             HHHHhCCC
Q 040292          219 LELLTGKK  226 (227)
Q Consensus       219 ~el~tg~~  226 (227)
                      ..+..|..
T Consensus       383 ~~~~~~~~  390 (1351)
T KOG1035|consen  383 LQLSQGED  390 (1351)
T ss_pred             hhhhhcCc
Confidence            98877754

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=95.97  E-value=0.019  Score=51.17  Aligned_cols=89  Identities=15%  Similarity=0.085  Sum_probs=51.9

Q ss_pred             hHHHHHhcC----CCcccceeEEEEe-eCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHH-HHHhh
Q 040292           90 NCIAFASQM----SHKNILKFVGCCL-ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA-VAYLH  163 (227)
Q Consensus        90 ~Ei~~l~~l----~H~niv~l~g~~~-~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~g-l~~LH  163 (227)
                      +|...+.++    ....=+.+-.++. -.+...|+|||++|-.+.+...-...    ..+.+   .++..++++ +.-+-
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~----g~d~k---~ia~~~~~~f~~q~~  282 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA----GIDRK---ELAELLVRAFLRQLL  282 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc----CCCHH---HHHHHHHHHHHHHHH
Confidence            565555555    2222233333343 35677899999999888887422111    23322   222222222 22222


Q ss_pred             hcCCCCeEEecCCCCceeecCCCce
Q 040292          164 VGFSRPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       164 ~~~~~~i~H~dlkp~nil~~~~~~~  188 (227)
                         ..+++|.|.+|.|++++.++.+
T Consensus       283 ---~dgffHaDpHpGNi~v~~~g~i  304 (517)
T COG0661         283 ---RDGFFHADPHPGNILVRSDGRI  304 (517)
T ss_pred             ---hcCccccCCCccceEEecCCcE
Confidence               5689999999999999998765

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.66  E-value=0.042  Score=43.78  Aligned_cols=54  Identities=7%  Similarity=0.017  Sum_probs=31.3

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCc---ccceeEEEEeeC---CcceeEeecccCCChh
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHK---NILKFVGCCLET---EVPILVFEFVACGTLA  129 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~---niv~l~g~~~~~---~~~~lV~E~~~~gsL~  129 (227)
                      +|..........+.  +|.++|..+...   .+.++++.....   ...+++|++++|.++.
T Consensus        23 lR~~~~~~~~~~~~--~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~   82 (235)
T cd05155          23 VRLPSAAGYAGQVR--KEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETAT   82 (235)
T ss_pred             EEcCCccchHHHHH--HHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCC
Confidence            44433322234566  999988887432   344444443322   2347899999987764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.62  E-value=0.029  Score=45.09  Aligned_cols=85  Identities=15%  Similarity=0.217  Sum_probs=53.6

Q ss_pred             hHHHHHhcC--CCcccceeEEEEeeCCcceeEeecccCC-ChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcC
Q 040292           90 NCIAFASQM--SHKNILKFVGCCLETEVPILVFEFVACG-TLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGF  166 (227)
Q Consensus        90 ~Ei~~l~~l--~H~niv~l~g~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  166 (227)
                      +|+..|.++  -+-.+.+-+++.    .-.|||||+... .-.-.|...      ++...+...+..++++.+.-|-.  
T Consensus       117 kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv------~~e~~e~~~~~~~~v~~~~~l~~--  184 (268)
T COG1718         117 KEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV------PLELEEAEGLYEDVVEYMRRLYK--  184 (268)
T ss_pred             HHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcccC------CcCchhHHHHHHHHHHHHHHHHH--
Confidence            677777777  334444545443    346999999543 111122211      22222566777788888877762  


Q ss_pred             CCCeEEecCCCCceeecCCC
Q 040292          167 SRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       167 ~~~i~H~dlkp~nil~~~~~  186 (227)
                      ..+++|+||+.-|||+.++.
T Consensus       185 ~a~LVHgDLSEyNiL~~~~~  204 (268)
T COG1718         185 EAGLVHGDLSEYNILVHDGE  204 (268)
T ss_pred             hcCcccccchhhheEEECCe
Confidence            48999999999999998544

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=94.51  E-value=0.0077  Score=59.45  Aligned_cols=136  Identities=9%  Similarity=-0.110  Sum_probs=89.6

Q ss_pred             hHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhh--hc
Q 040292           90 NCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLH--VG  165 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH--~~  165 (227)
                      .|...++...|+++...+.-...  ..+.+..++|+.+|.+.+.+.+..... ++++..-......+......-+|  ++
T Consensus      1278 ~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~-~~ld~~~v~~~~kvsvl~~~~~ls~tn 1356 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEES-PDLDRSPVHLRHKVSVLNRNVILSLTN 1356 (2724)
T ss_pred             hhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccC-CcchhchHHHHHHHHHhccchhhhccc
Confidence            34445556789988776554432  345789999999999999886533211 13333333333333244444433  23


Q ss_pred             CCCCeEEecCCCCceeecCCCc---------------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          166 FSRPIVFRDIKPFTTHVNDNDK---------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~~~~~---------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                      ....-+|++||+-|.++..+..                     .++++.|+.|+......++.++|+|+.|+.+|+...|
T Consensus      1357 lg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~ 1436 (2724)
T KOG1826|consen 1357 LGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDG 1436 (2724)
T ss_pred             CCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcc
Confidence            3556689999999988765431                     1567778888888777888889999999999988776


Q ss_pred             CC
Q 040292          225 KK  226 (227)
Q Consensus       225 ~~  226 (227)
                      .+
T Consensus      1437 n~ 1438 (2724)
T KOG1826|consen 1437 NA 1438 (2724)
T ss_pred             cH
Confidence            54

>PLN02876 acyl-CoA dehydrogenase

Probab=94.48  E-value=0.093  Score=49.77  Aligned_cols=70  Identities=16%  Similarity=0.229  Sum_probs=47.6

Q ss_pred             cccchhHHHHHhcCC-Cccc--ceeEEEEeeC---CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHH
Q 040292           85 EYYCFNCIAFASQMS-HKNI--LKFVGCCLET---EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA  158 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~-H~ni--v~l~g~~~~~---~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~g  158 (227)
                      .+.  +|+.+|+.+. |+++  .+++.+|.+.   +..++||||++|..+.+..       ...++..++..+..++++.
T Consensus        84 ~~~--rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~~~~~-------~~~~~~~~r~~l~~~l~~~  154 (822)
T PLN02876         84 AVE--REYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIFVDPK-------LPGVAPERRRAIYRATAKV  154 (822)
T ss_pred             HHH--HHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcccCCcc-------CCCCCHHHHHHHHHHHHHH
Confidence            456  9999999995 6664  7788888664   4678999999975543211       0123455566677777777


Q ss_pred             HHHhh
Q 040292          159 VAYLH  163 (227)
Q Consensus       159 l~~LH  163 (227)
                      |..||
T Consensus       155 La~LH  159 (822)
T PLN02876        155 LAALH  159 (822)
T ss_pred             HHHHh
Confidence            77666

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=94.44  E-value=0.07  Score=47.71  Aligned_cols=62  Identities=18%  Similarity=0.163  Sum_probs=39.0

Q ss_pred             CCcceeEeecccCCChhhh--hcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC
Q 040292          113 TEVPILVFEFVACGTLADR--IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN  185 (227)
Q Consensus       113 ~~~~~lV~E~~~~gsL~~~--l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~  185 (227)
                      .....|+||||+|..+.|.  +.+.+      ++......-+.+...-+-+     ..+++|.|-.|.||++.++
T Consensus       274 st~RVLtME~~~G~~i~Dl~~i~~~g------i~~~~i~~~l~~~~~~qIf-----~~GffHaDPHPGNilv~~~  337 (538)
T KOG1235|consen  274 STKRVLTMEYVDGIKINDLDAIDKRG------ISPHDILNKLVEAYLEQIF-----KTGFFHADPHPGNILVRPN  337 (538)
T ss_pred             CcceEEEEEecCCccCCCHHHHHHcC------CCHHHHHHHHHHHHHHHHH-----hcCCccCCCCCCcEEEecC
Confidence            3467899999999877764  33332      3333333333322222222     4579999999999999854

>PRK10593 hypothetical protein; Provisional

Probab=93.74  E-value=0.29  Score=40.58  Aligned_cols=55  Identities=7%  Similarity=-0.004  Sum_probs=38.6

Q ss_pred             eEEEcCC-CCcccccchhHHHHHhcCCC---cccceeEEEEee---CCcceeEeecccCCChhh
Q 040292           74 ISEFGDN-LNTEEYYCFNCIAFASQMSH---KNILKFVGCCLE---TEVPILVFEFVACGTLAD  130 (227)
Q Consensus        74 vK~~~~~-~~~~~~~~~~Ei~~l~~l~H---~niv~l~g~~~~---~~~~~lV~E~~~~gsL~~  130 (227)
                      ++++... .....|.  +|...|+.+.-   ..+.+++++|..   .+..++|||+++++++.+
T Consensus        41 ~~k~~~~~~~~~~~~--~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~  102 (297)
T PRK10593         41 MPLMARSFSTPGVAQ--QEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVEA  102 (297)
T ss_pred             EEEEecccccchHHH--HHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecCC
Confidence            4344433 2345777  99999988842   467888888754   356899999999877643

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.52  E-value=0.13  Score=45.86  Aligned_cols=45  Identities=18%  Similarity=0.307  Sum_probs=33.9

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeC-CcceeEeecccCCChhhhhcCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLET-EVPILVFEFVACGTLADRIHDP  135 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~  135 (227)
                      --+.+++.+.|+|+..++.+-... ....+|+|++ +.||++.+...
T Consensus        31 gr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~   76 (725)
T KOG1093|consen   31 GRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTG   76 (725)
T ss_pred             hhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhc
Confidence            345577888999999988876543 3467999999 47999887653

>TIGR02721 ycfN_thiK thiamine kinase

Probab=92.59  E-value=0.44  Score=38.35  Aligned_cols=36  Identities=11%  Similarity=0.051  Sum_probs=23.9

Q ss_pred             hHHHHHhcCCCccc-ceeEEEEeeCCcceeEeecccCCChh
Q 040292           90 NCIAFASQMSHKNI-LKFVGCCLETEVPILVFEFVACGTLA  129 (227)
Q Consensus        90 ~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E~~~~gsL~  129 (227)
                      +|..+++.+....+ .+++..+.    -++|+||++|..+.
T Consensus        40 ~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~   76 (256)
T TIGR02721        40 REYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT   76 (256)
T ss_pred             HHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence            89888888854333 34444432    36899999986654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=91.23  E-value=0.84  Score=38.31  Aligned_cols=40  Identities=18%  Similarity=0.232  Sum_probs=28.3

Q ss_pred             hHHHHHhcCCC--cccceeEEEEeeCC--cceeEeecccCCChh
Q 040292           90 NCIAFASQMSH--KNILKFVGCCLETE--VPILVFEFVACGTLA  129 (227)
Q Consensus        90 ~Ei~~l~~l~H--~niv~l~g~~~~~~--~~~lV~E~~~~gsL~  129 (227)
                      +|..+++.+.-  .-+...++.|..+.  ..+.||+|++|..+.
T Consensus        70 re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~  113 (321)
T COG3173          70 REYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVW  113 (321)
T ss_pred             hHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceecc
Confidence            78888877732  33455678887766  778999999874443

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=88.33  E-value=1.2  Score=35.63  Aligned_cols=90  Identities=11%  Similarity=0.034  Sum_probs=55.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|++....-.   .-|.  ++.+++.++.  .|+++..  ......-++.|+|---.              -.+    ..
T Consensus        90 lKKi~slp~~~~~~~y~--nky~v~Armh--GilrL~N--Dn~~~yGvIlE~Cy~~~--------------i~~----~N  145 (308)
T PF07387_consen   90 LKKIRSLPCCINDALYF--NKYRVFARMH--GILRLKN--DNNYKYGVILERCYKIK--------------INF----SN  145 (308)
T ss_pred             hhhccCCCcccchhhhh--hhhhHHHHhh--heeEeec--CCCceeEEEEeeccCcc--------------cch----hH
Confidence            8888766544   3455  8888888774  3566552  12223448889883100              011    11


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~  188 (227)
                      ++..=+..|.-.|.+ +.+.+|+|-.|+||+.|..|.+
T Consensus       146 ~i~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~l  182 (308)
T PF07387_consen  146 FITAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYL  182 (308)
T ss_pred             HHHHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCE
Confidence            222224556777854 6789999999999999988765

The function of this family is unknown.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=87.62  E-value=3.8  Score=33.03  Aligned_cols=44  Identities=14%  Similarity=0.199  Sum_probs=33.0

Q ss_pred             ccccchhHHHHHhcC---CCcccceeEEEEeeCCcceeEeecccCCChh
Q 040292           84 EEYYCFNCIAFASQM---SHKNILKFVGCCLETEVPILVFEFVACGTLA  129 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~  129 (227)
                      ..|.  .|+.-|..+   +--++.+++.+-...+..|+|+||++-|.+.
T Consensus        53 ~~f~--AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          53 SMFT--AEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             HHHH--HHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            5566  787766655   4456777887777888999999999876654

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=87.55  E-value=0.74  Score=38.96  Aligned_cols=86  Identities=17%  Similarity=0.199  Sum_probs=53.5

Q ss_pred             cccchhHHHHHhcCC-Ccc-cceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHh
Q 040292           85 EYYCFNCIAFASQMS-HKN-ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYL  162 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~-H~n-iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~L  162 (227)
                      .+.+.+|+..|+.|. |.. +...++    .+..++|||++.+-.|...-+-.        +......   .+..-+.-|
T Consensus       154 Rlaa~kEfafmkaL~e~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v~--------d~~~ly~---~lm~~Iv~l  218 (465)
T KOG2268|consen  154 RLAATKEFAFMKALYERGFPVPKPID----HNRHCVVMELVDGYPLRQVRHVE--------DPPTLYD---DLMGLIVRL  218 (465)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCCccc----ccceeeHHHhhcccceeeeeecC--------ChHHHHH---HHHHHHHHH
Confidence            344568999999883 332 333343    35678999999887776543221        1122222   222223334


Q ss_pred             hhcCCCCeEEecCCCCceeecCCCce
Q 040292          163 HVGFSRPIVFRDIKPFTTHVNDNDKL  188 (227)
Q Consensus       163 H~~~~~~i~H~dlkp~nil~~~~~~~  188 (227)
                      -   .++++|+|..-.||++++++.+
T Consensus       219 a---~~GlIHgDFNEFNimv~dd~~i  241 (465)
T KOG2268|consen  219 A---NHGLIHGDFNEFNIMVKDDDKI  241 (465)
T ss_pred             H---HcCceecccchheeEEecCCCE
Confidence            4   7899999999999999976643

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=87.35  E-value=1.2  Score=38.43  Aligned_cols=87  Identities=14%  Similarity=0.125  Sum_probs=52.9

Q ss_pred             chhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhh--hhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           88 CFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        88 ~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~--~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      +.+|+..|.+++.-.|..-.-...  ....|||+|+- ++=..  .|..      .+++...+...-.+++.-+.-|.+ 
T Consensus       213 AEKE~RNLkRl~~aGIP~PePIlL--k~hVLVM~FlG-rdgw~aPkLKd------~~ls~~ka~~~Y~~~v~~MR~lY~-  282 (520)
T KOG2270|consen  213 AEKEMRNLKRLNNAGIPCPEPILL--KNHVLVMEFLG-RDGWAAPKLKD------ASLSTSKARELYQQCVRIMRRLYQ-  282 (520)
T ss_pred             HHHHHHHHHHHHhcCCCCCCceee--ecceEeeeecc-CCCCcCccccc------ccCChHHHHHHHHHHHHHHHHHHH-
Confidence            346787777775443322111111  23469999994 33211  2221      145555666677777777766664 


Q ss_pred             CCCCeEEecCCCCceeecCC
Q 040292          166 FSRPIVFRDIKPFTTHVNDN  185 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~~~  185 (227)
                       ..+++|.||.-.|+|+-+.
T Consensus       283 -~c~LVHADLSEfN~LyhdG  301 (520)
T KOG2270|consen  283 -KCRLVHADLSEFNLLYHDG  301 (520)
T ss_pred             -HhceeccchhhhhheEECC
Confidence             5689999999999988654

>PHA03111 Ser/Thr kinase; Provisional

Probab=80.66  E-value=2.7  Score=35.66  Aligned_cols=40  Identities=18%  Similarity=0.150  Sum_probs=26.5

Q ss_pred             HHHHHHHHHHHHHHHh-hhcCCCCeEEecCCCCceeecCCC
Q 040292          147 HRLKVAMEIANAVAYL-HVGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~L-H~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                      -...+..|++--.-.+ -..+....+|-||||+|||+-+..
T Consensus       280 YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        280 YIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCC
Confidence            3455666766544233 233356789999999999987654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	227
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		3e-15
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		8e-15
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-12
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		3e-12
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		9e-12
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-11
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		5e-11
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		6e-11
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		8e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-10
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		1e-10
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-10
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-10
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		5e-10
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		5e-10
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		8e-10
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		8e-10
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		8e-10
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-09
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-09
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-09
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-09
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-09
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-09
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-09
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-09
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-09
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-09
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-09
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-09
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-09
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-09
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-09
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-09
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-09
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-09
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-09
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-09
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-09
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-09
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-09
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-09
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-09
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-09
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		7e-09
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		1e-08
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-08
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		3e-08
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-08
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-08
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		8e-08
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		8e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-07
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-07
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-07
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		3e-07
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		3e-07
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		3e-07
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-07
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-07
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-07
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-07
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		3e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-07
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		3e-07
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		3e-07
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		4e-07
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		4e-07
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		4e-07
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		4e-07
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		4e-07
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-07
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		5e-07
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		5e-07
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		5e-07
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		6e-07
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		6e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		6e-07
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		6e-07
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		7e-07
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		7e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		7e-07
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		7e-07
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		7e-07
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		7e-07
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		8e-07
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		8e-07
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		8e-07
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-07
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		9e-07
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		9e-07
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		9e-07
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		9e-07
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		9e-07
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		9e-07
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-06
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-06
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-06
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-06
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-06
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-06
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-06
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-06
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-06
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-06
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-06
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-06
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-06
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-06
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-06
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-06
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-06
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		3e-06
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-06
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		4e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-06
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-06
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-06
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		4e-06
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-06
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		4e-06
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		4e-06
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-06
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		4e-06
4h58_A	275	Braf In Complex With Compound 3 Length = 275		4e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-06
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		5e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-06
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		5e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		5e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-06
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		5e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		5e-06
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-06
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		7e-06
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		7e-06
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		7e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		8e-06
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-05
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-05
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-05
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-05
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-05
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-05
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-05
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-05
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-05
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-05
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-05
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-05
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-05
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-05
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-05
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-05
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-05
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		4e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		5e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		5e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		5e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		6e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		6e-05
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-05
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-05
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		6e-05
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		6e-05
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		6e-05
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		6e-05
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		6e-05
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		6e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		7e-05
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		7e-05
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		7e-05
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		7e-05
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		7e-05
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		7e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		8e-05
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		8e-05
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		8e-05
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		8e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		8e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		8e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		9e-05
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		9e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		9e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		9e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		9e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		9e-05
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		9e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		9e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		9e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		9e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		9e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		9e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		9e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-04
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-04
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-04
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-04
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-04
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		1e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		1e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-04
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-04
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		1e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		1e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-04
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-04
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-04
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		2e-04
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		3e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		3e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		3e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-04
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-04
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		3e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		3e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		3e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		4e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		4e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		4e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		4e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		4e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		4e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		4e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		4e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		4e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		4e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		5e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		5e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		5e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		5e-04
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		5e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-04
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		5e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		5e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		6e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		6e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		6e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		6e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		7e-04
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		7e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		7e-04
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		7e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		7e-04
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		8e-04
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		8e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		8e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 23/158 (14%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +   S   H+N+L+  G C+     +LV+ ++A G++A  + +   SQ  P     R ++
Sbjct: 86  VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRI 144
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVND--------------NDKLI 189
           A+  A  +AYLH      I+ RD+K         F   V D                 + 
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG 227
           GT G IAPE ++TG  +EK+DV+ +G +LLEL+TG++ 
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 242

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 23/158 (14%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +   S   H+N+L+  G C+     +LV+ ++A G++A  + +   SQ  P     R ++
Sbjct: 78  VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRI 136
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-DKLIGTFGF---------------- 194
           A+  A  +AYLH      I+ RD+K     +++  + ++G FG                 
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 195 -----IAPECITTGNCNEKSDVYSFGALLLELLTGKKG 227
                IAPE ++TG  +EK+DV+ +G +LLEL+TG++ 
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 234

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           S+++H NI+K  G CL    P+ LV E+   G+L + +H      L  +   H +   ++
Sbjct: 56  SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQ 110
Query: 155 IANAVAYLHVGFSRPIVFRDIKP----------------------FTTHVNDNDKLIGTF 192
            +  VAYLH    + ++ RD+KP                        TH+ +N    G+ 
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSA 167
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            ++APE     N +EK DV+S+G +L E++T +K
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 31/154 (20%)
Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           S+++H NI+K  G CL    P+ LV E+   G+L + +H      L  +   H +   ++
Sbjct: 57  SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQ 111
Query: 155 IANAVAYLHVGFSRPIVFRDIKP----------------------FTTHVNDNDKLIGTF 192
            +  VAYLH    + ++ RD+KP                        TH+ +N    G+ 
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSA 168
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            ++APE     N +EK DV+S+G +L E++T +K
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 24/153 (15%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +A   ++ H NI+ F+G   +     +V E+++ G+L   +H  +G++ E    + RL +
Sbjct: 85  VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAR-EQLDERRRLSM 142
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVND-------------NDKLIG 190
           A ++A  + YLH   + PIV RD+K         +T  V D             +    G
Sbjct: 143 AYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAG 201
Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLT 223
           T  ++APE +     NEKSDVYSFG +L EL T
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 24/153 (15%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +A   ++ H NI+ F+G   +     +V E+++ G+L   +H  +G++ E    + RL +
Sbjct: 85  VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHK-SGAR-EQLDERRRLSM 142
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVND-------------NDKLIG 190
           A ++A  + YLH   + PIV R++K         +T  V D             +    G
Sbjct: 143 AYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG 201
Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLT 223
           T  ++APE +     NEKSDVYSFG +L EL T
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 31/153 (20%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM--KHRLKVAMEIAN 157
           H +++  +G C E    IL+++++  G L   ++   GS L    M  + RL++ +  A 
Sbjct: 94  HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAAR 150
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDN-----------------DK------LIGTFGF 194
            + YLH   +R I+ RD+K     +++N                 D+      + GT G+
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKKG 227
           I PE    G   EKSDVYSFG +L E+L  +  
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM--KHRLKVAMEIAN 157
           H +++  +G C E    IL+++++  G L   ++   GS L    M  + RL++ +  A 
Sbjct: 94  HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAAR 150
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDN-----------------------DKLIGTFGF 194
            + YLH   +R I+ RD+K     +++N                         + GT G+
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKKG 227
           I PE    G   EKSDVYSFG +L E+L  +  
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 29/156 (18%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   ++  H+N+++ +G   + +   LV+ ++  G+L DR+   +G+   P     R K+
Sbjct: 81  IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKI 138
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVND---------------NDKL 188
           A   AN + +LH       + RDIK         FT  ++D                 ++
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRI 195
Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +GT  ++APE +  G    KSD+YSFG +LLE++TG
Sbjct: 196 VGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 29/156 (18%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   ++  H+N+++ +G   + +   LV+ ++  G+L DR+   +G+   P     R K+
Sbjct: 81  IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKI 138
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVND---------------NDKL 188
           A   AN + +LH       + RDIK         FT  ++D                 ++
Sbjct: 139 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRI 195
Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +GT  ++APE +  G    KSD+YSFG +LLE++TG
Sbjct: 196 VGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 29/156 (18%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   ++  H+N+++ +G   + +   LV+ ++  G+L DR+   +G+   P     R K+
Sbjct: 75  IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKI 132
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVND---------------NDKL 188
           A   AN + +LH       + RDIK         FT  ++D                 ++
Sbjct: 133 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRI 189
Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +GT  ++APE +  G    KSD+YSFG +LLE++TG
Sbjct: 190 VGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 29/156 (18%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   ++  H+N+++ +G   + +   LV+ +   G+L DR+   +G+   P     R K+
Sbjct: 72  IKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWHXRCKI 129
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVND---------------NDKL 188
           A   AN + +LH       + RDIK         FT  ++D                 ++
Sbjct: 130 AQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI 186
Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +GT  + APE +  G    KSD+YSFG +LLE++TG
Sbjct: 187 VGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 78  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 132
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHV--NDN 185
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   +  
Sbjct: 133 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 189
Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           D L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 109
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHV--NDN 185
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   +  
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           D L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 167 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 107
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHV--NDN 185
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   +  
Sbjct: 108 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164
Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           D L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 165 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 78  GDNLNTEEYYCFNCIAF-ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPN 136
           G+    E++  F    F  S ++H NI+K  G  L    P +V EFV CG L  R+ D  
Sbjct: 59  GETEMIEKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD-- 114
Query: 137 GSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTHVNDN-------- 185
             +  P     +L++ ++IA  + Y+    + PIV RD++    F   +++N        
Sbjct: 115 --KAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 186 ------------DKLIGTFGFIAPECI--TTGNCNEKSDVYSFGALLLELLTGK 225
                         L+G F ++APE I     +  EK+D YSF  +L  +LTG+
Sbjct: 172 DFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 78  GDNLNTEEYYCFNCIAF-ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPN 136
           G+    E++  F    F  S ++H NI+K  G  L    P +V EFV CG L  R+ D  
Sbjct: 59  GETEMIEKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD-- 114
Query: 137 GSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTHVNDN-------- 185
             +  P     +L++ ++IA  + Y+    + PIV RD++    F   +++N        
Sbjct: 115 --KAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 186 ------------DKLIGTFGFIAPECI--TTGNCNEKSDVYSFGALLLELLTGK 225
                         L+G F ++APE I     +  EK+D YSF  +L  +LTG+
Sbjct: 172 DFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 33/174 (18%)
Query: 78  GDNLNTEEYYCFNCIAF-ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPN 136
           G+    E++  F    F  S ++H NI+K  G  L    P +V EFV CG L  R+ D  
Sbjct: 59  GETEMIEKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLD-- 114
Query: 137 GSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTHVNDN-------- 185
             +  P     +L++ ++IA  + Y+    + PIV RD++    F   +++N        
Sbjct: 115 --KAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171
Query: 186 ------------DKLIGTFGFIAPECI--TTGNCNEKSDVYSFGALLLELLTGK 225
                         L+G F ++APE I     +  EK+D YSF  +L  +LTG+
Sbjct: 172 DFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 49/212 (23%)
Query: 42  GKYYPIRNF-IALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAFASQMSH 100
           GK Y  R F I  E+      +DP      D  IS+  +N+  E           + + H
Sbjct: 21  GKVY--RAFWIGDEVAVKAARHDP------DEDISQTIENVRQEA-------KLFAMLKH 65
Query: 101 KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVA 160
            NI+   G CL+     LV EF   G L +R+   +G ++ P ++   +  A++IA  + 
Sbjct: 66  PNIIALRGVCLKEPNLCLVMEFARGGPL-NRVL--SGKRIPPDIL---VNWAVQIARGMN 119
Query: 161 YLHVGFSRPIVFRDIKP----FTTHVNDND---KLI--------------------GTFG 193
           YLH     PI+ RD+K         V + D   K++                    G + 
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA 179
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           ++APE I     ++ SDV+S+G LL ELLTG+
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   ++    L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 111
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 112 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 169 TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 78  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 132
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 133 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 189
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 190 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 69  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 123
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 124 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 180
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 181 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 54  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 108
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 109 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 165
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 166 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 111
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 112 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 107
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 108 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 109
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 167 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 109
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR 166
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 54  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 108
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 109 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR 165
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 166 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 111
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 112 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 169 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 109
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 109
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 56  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 110
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 111 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 167
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 55  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 109
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 110 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 166
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 167 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 56  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSRFD 110
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHV--NDN 185
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   +  
Sbjct: 111 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           D L GT  ++ PE I     +EK D++S G L  E L G
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 51  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 105
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 106 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 162
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 163 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 52  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 106
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 107 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 163
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 49  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-----QKLSKFD 103
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 104 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 160
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 161 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 53  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSKFD 107
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 108 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR 164
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 165 TTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   G +   +      +L  F 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-----KLSKFD 111
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 112 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 169 XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 27/159 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   GT+   +      +L  F 
Sbjct: 56  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQ-----KLSRFD 110
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 111 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR 167
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             L GT  ++ PE I     +EK D++S G L  E L G
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     +   S + H NIL+  G   +     L+ E+   G +   +      +L  F 
Sbjct: 57  EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ-----KLSKFD 111
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK 187
            +       E+ANA++Y H   S+ ++ RDIKP                 ++ H   + +
Sbjct: 112 EQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 168
Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  ++ PE I     +EK D++S G L  E L GK
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H    +    F MK  +
Sbjct: 69  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----ASETKFEMKKLI 123
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG--------------- 193
            +A + A  + YLH   ++ I+ RD+K     ++ DN   IG FG               
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 194 -------FIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
                  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H    +    F MK  +
Sbjct: 57  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH----ASETKFEMKKLI 111
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG--------------- 193
            +A + A  + YLH   ++ I+ RD+K     ++ DN   IG FG               
Sbjct: 112 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 194 -------FIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
                  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G     ++ I V ++    +L   +H    +    F MK  +
Sbjct: 69  NEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLH----ASETKFEMKKLI 123
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG--------------- 193
            +A + A  + YLH   ++ I+ RD+K     ++ DN   IG FG               
Sbjct: 124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180
Query: 194 -------FIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
                  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 88  CFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI-HDPNGSQLEPFLMK 146
           C   I    Q++H N++K+    +E     +V E    G L+  I H     +L P   +
Sbjct: 79  CIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP--ER 136
Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDN 185
              K  +++ +A+ ++H   SR ++ RDIKP                     F++     
Sbjct: 137 TVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193
Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
             L+GT  +++PE I     N KSD++S G LL E+
Sbjct: 194 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 41/161 (25%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPIL--VFEFVACGTLADRI--HDPNGSQLEPFLMKH 147
           I     + H++I+K+ GCC +     L  V E+V  G+L D +  H    +QL       
Sbjct: 84  IDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL------- 136
Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--IGTFG------------ 193
            L  A +I   +AYLH   ++  + RD+      + DND+L  IG FG            
Sbjct: 137 -LLFAQQICEGMAYLH---AQHYIHRDLAARNV-LLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                      + APEC+        SDV+SFG  L ELLT
Sbjct: 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 35/163 (21%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPN------GSQLEPFLMKH 147
           + + H++I+KF G C+E +  I+VFE++  G L    R H P+      G+         
Sbjct: 70  TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------- 193
            L +A +IA  + YL    S+  V RD+      V +N  + IG FG             
Sbjct: 130 MLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 194 ---------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                    ++ PE I       +SDV+S G +L E+ T GK+
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 41/161 (25%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKH 147
           I     + H++I+K+ GCC +   +   LV E+V  G+L D +  H    +QL       
Sbjct: 67  IDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL------- 119
Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--IGTFG------------ 193
            L  A +I   +AYLH   S+  + R++      + DND+L  IG FG            
Sbjct: 120 -LLFAQQICEGMAYLH---SQHYIHRNLAARNV-LLDNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                      + APEC+        SDV+SFG  L ELLT
Sbjct: 175 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 32/165 (19%)
Query: 79  DNLNTEEYY-CFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG 137
           D++N   Y  C++   +  + S KN  +    CL      +  EF   GTL   I    G
Sbjct: 62  DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRG 116
Query: 138 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--- 193
            +L+  L    L++  +I   V Y+H   S+ ++ RD+KP    + D  ++ IG FG   
Sbjct: 117 EKLDKVLA---LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELL 222
                           +++PE I++ +  ++ D+Y+ G +L ELL
Sbjct: 171 SLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 45/163 (27%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKH 147
           I     + H++I+K+ GCC +   +   LV E+V  G+L D +  H    +QL       
Sbjct: 67  IDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL------- 119
Query: 148 RLKVAMEIANAVAYLHVG--FSRPIVFRDIKPFTTHVNDNDKL--IGTFG---------- 193
            L  A +I   +AYLH      R +  R++      + DND+L  IG FG          
Sbjct: 120 -LLFAQQICEGMAYLHAQHYIHRNLAARNV------LLDNDRLVKIGDFGLAKAVPEGHE 172
Query: 194 -------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                        + APEC+        SDV+SFG  L ELLT
Sbjct: 173 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 45/163 (27%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKH 147
           I     + H++I+K+ GCC +   +   LV E+V  G+L D +  H    +QL       
Sbjct: 61  IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL------- 113
Query: 148 RLKVAMEIANAVAYLHVG--FSRPIVFRDIKPFTTHVNDNDKL--IGTFG---------- 193
            L  A +I   +AYLH      R +  R++      + DND+L  IG FG          
Sbjct: 114 -LLFAQQICEGMAYLHAQHYIHRALAARNV------LLDNDRLVKIGDFGLAKAVPEGHE 166
Query: 194 -------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                        + APEC+        SDV+SFG  L ELLT
Sbjct: 167 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 45/163 (27%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKH 147
           I     + H++I+K+ GCC +   +   LV E+V  G+L D +  H    +QL       
Sbjct: 62  IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL------- 114
Query: 148 RLKVAMEIANAVAYLHVG--FSRPIVFRDIKPFTTHVNDNDKL--IGTFG---------- 193
            L  A +I   +AYLH      R +  R++      + DND+L  IG FG          
Sbjct: 115 -LLFAQQICEGMAYLHAQHYIHRALAARNV------LLDNDRLVKIGDFGLAKAVPEGHE 167
Query: 194 -------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                        + APEC+        SDV+SFG  L ELLT
Sbjct: 168 YYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 70  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 124
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 125 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 181
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 72  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 126
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 127 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 183
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 184 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 213

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 64  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 175
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH  +++  G CLE     LVFEF+  G L+D +    G     F  +  L + +++ 
Sbjct: 58  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVC 113
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL       ++ RD+      V +N  + +  FG                     +
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 170
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 70  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 124
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 125 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 181
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 182 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 69  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 123
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 124 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 180
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 181 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 210

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 65  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 119
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 120 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 176
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 177 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 206

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 74  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 128
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 129 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 185
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 186 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 215

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 64  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 64  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 175
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 64  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 118
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK 175
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 66  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 120
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 121 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 177
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 178 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 207

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 73  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 127
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 128 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK 184
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 185 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 214

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 59  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 113
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 114 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 170
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 171 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 200

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 49  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 106
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 107 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 47  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 104
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 105 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 159 MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 30/153 (19%)
Query: 95  ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +SQ+SH+NI+  +    E +   LV E++   TL++ I + +G    P  +   +    +
Sbjct: 65  SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHG----PLSVDTAINFTNQ 119
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTF 192
           I + + + H      IV RDIKP    ++ N  L                      +GT 
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            + +PE       +E +D+YS G +L E+L G+
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 49  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 106
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 107 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 50  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 107
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 108 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 161
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 162 MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 33/158 (20%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           I     + H+NI+K+ G C E       L+ EF+  G+L + +   N +++    +K +L
Sbjct: 62  IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKIN---LKQQL 117
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------- 193
           K A++I   + YL    SR  V RD+      V    ++ IG FG               
Sbjct: 118 KYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   + APEC+        SDV+SFG  L ELLT
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 54  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ 111
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 112 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 166 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH  +++  G CLE     LVFEF+  G L+D +    G     F  +  L + +++ 
Sbjct: 61  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVC 116
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL       ++ RD+      V +N  + +  FG                     +
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 173
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 33/158 (20%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           I     + H+NI+K+ G C E       L+ EF+  G+L + +   N +++    +K +L
Sbjct: 74  IEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKIN---LKQQL 129
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------- 193
           K A++I   + YL    SR  V RD+      V    ++ IG FG               
Sbjct: 130 KYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   + APEC+        SDV+SFG  L ELLT
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 84  EEYYCF-NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP 142
           E++  F N +A   +  H NIL F+G   +  + I V ++    +L   +H     Q   
Sbjct: 74  EQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLH----VQETK 128
Query: 143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------- 193
           F M   + +A + A  + YLH   ++ I+ RD+K     +++   + IG FG        
Sbjct: 129 FQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185
Query: 194 --------------FIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
                         ++APE I   + N    +SDVYS+G +L EL+TG+
Sbjct: 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH  +++  G CLE     LVFEF+  G L+D +    G     F  +  L + +++ 
Sbjct: 56  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVC 111
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL       ++ RD+      V +N  + +  FG                     +
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 168
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 37/162 (22%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---EPFLMK---- 146
           + + H++I+KF G C + +  I+VFE++  G L    R H P+   L   +P   K    
Sbjct: 72  TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 147 --HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------- 193
               L +A +IA+ + YL    S+  V RD+      V  N  + IG FG          
Sbjct: 132 LSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188
Query: 194 ------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                       ++ PE I       +SDV+SFG +L E+ T
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 49  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 107 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH  +++  G CLE     LVFEF+  G L+D +    G     F  +  L + +++ 
Sbjct: 58  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVC 113
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL       ++ RD+      V +N  + +  FG                     +
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 170
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           S ++H  I++  G   + +   ++ +++  G L   +     SQ  P  +      A E+
Sbjct: 61  SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR---KSQRFPNPVAKFY--AAEV 115
Query: 156 ANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVND-NDKLIGTFGFIAP 197
             A+ YLH   S+ I++RD+KP                 F  +V D    L GT  +IAP
Sbjct: 116 CLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAP 172
Query: 198 ECITTGNCNEKSDVYSFGALLLELLTG 224
           E ++T   N+  D +SFG L+ E+L G
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAG 199

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 54  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 112 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 166 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 47  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 105 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 159 MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 29/152 (19%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH  +++  G CLE     LVFEF+  G L+D +    G     F  +  L + +++ 
Sbjct: 78  KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL----FAAETLLGMCLDVC 133
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL       ++ RD+      V +N  + +  FG                     +
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 190
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 49  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 107 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 47  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 105 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 159 MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 62  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 119
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 120 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 173
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 174 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 51  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 108
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 109 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 163 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 50  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 107
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 108 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 161
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 162 MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 49  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 107 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 51  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 108
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 109 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 163 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 51  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 108
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 109 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 163 MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 53  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 110
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 111 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 164
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 165 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 54  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 112 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 166 MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 54  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 112 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 166 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 49  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 106
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 107 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 54  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 111
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 112 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 166 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 56  IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 43/171 (25%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
           N ++  C N       ++H+N++KF G   E  +  L  E+ + G L DRI +P+    E
Sbjct: 50  NIKKEICIN-----KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE 103
Query: 142 PFLMK--HRLKVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND------------ 186
           P   +  H+L         V YLH +G    I  RDIKP    +++ D            
Sbjct: 104 PDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
Query: 187 -----------KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
                      K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 154 FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 43/171 (25%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
           N ++  C N +     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    E
Sbjct: 51  NIKKEICINAM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE 104
Query: 142 PFLMK--HRLKVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND------------ 186
           P   +  H+L         V YLH +G    I  RDIKP    +++ D            
Sbjct: 105 PDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
Query: 187 -----------KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
                      K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI ++ E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 60  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKL---TINKLLDMAAQI 114
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG--------------------- 193
           A  +A++     R  + R+++     V+D     I  FG                     
Sbjct: 115 AEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 171
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE I  G    KSDV+SFG LL E++T
Sbjct: 172 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 201

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 43/171 (25%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
           N ++  C N       ++H+N++KF G   E  +  L  E+ + G L DRI +P+    E
Sbjct: 50  NIKKEICIN-----KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE 103
Query: 142 PFLMK--HRLKVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND------------ 186
           P   +  H+L         V YLH +G    I  RDIKP    +++ D            
Sbjct: 104 PDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
Query: 187 -----------KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
                      K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 154 FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 54  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 112
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 113 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 162
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 43/171 (25%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
           N ++  C N       ++H+N++KF G   E  +  L  E+ + G L DRI +P+    E
Sbjct: 51  NIKKEICIN-----KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE 104
Query: 142 PFLMK--HRLKVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND------------ 186
           P   +  H+L         V YLH +G    I  RDIKP    +++ D            
Sbjct: 105 PDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATV 154
Query: 187 -----------KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
                      K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 56  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 56  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 56  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 56  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 43/171 (25%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
           N ++  C N       ++H+N++KF G   E  +  L  E+ + G L DRI +P+    E
Sbjct: 50  NIKKEICIN-----KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPE 103
Query: 142 PFLMK--HRLKVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND------------ 186
           P   +  H+L         V YLH +G    I  RDIKP    +++ D            
Sbjct: 104 PDAQRFFHQLMA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATV 153
Query: 187 -----------KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
                      K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 154 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 55  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 113
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 114 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 163
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 38/161 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK--HRL 149
           I     ++H+N++KF G   E  +  L  E+ + G L DRI +P+    EP   +  H+L
Sbjct: 56  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQL 114
Query: 150 KVAMEIANAVAYLH-VGFSRPIVFRDIKPFTTHVNDND---------------------- 186
                    V YLH +G    I  RDIKP    +++ D                      
Sbjct: 115 MA------GVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL 164
Query: 187 -KLIGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            K+ GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 42/160 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H N+LKF+G   + +    + E++  GTL   I   +      +    R+  A +IA+
Sbjct: 64  LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ----YPWSQRVSFAKDIAS 119
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDN-DKLIGTFG----------------------- 193
            +AYLH   S  I+ RD+      V +N + ++  FG                       
Sbjct: 120 GMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELL 222
                      ++APE I   + +EK DV+SFG +L E++
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 53  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 107
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 256 DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 313
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + R++      V +N  + +  FG    
Sbjct: 314 EVSAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 368 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 58  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 112
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 81  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 135
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 73  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 127
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 128 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 81  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 135
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 136 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 55  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 109
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 110 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 80  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 134
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 135 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 37/165 (22%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLE--------PFLM 145
           + + H++I++F G C E    ++VFE++  G L    R H P+   L         P  +
Sbjct: 98  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG----------- 193
              L VA ++A  + YL  G     V RD+      V     + IG FG           
Sbjct: 158 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 214
Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                      ++ PE I       +SDV+SFG +L E+ T GK+
Sbjct: 215 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 58  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 112
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 113 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G   + ++ I V ++    +L   +H         F M   +
Sbjct: 53  NEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 107
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 37/165 (22%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLE--------PFLM 145
           + + H++I++F G C E    ++VFE++  G L    R H P+   L         P  +
Sbjct: 69  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG----------- 193
              L VA ++A  + YL  G     V RD+      V     + IG FG           
Sbjct: 129 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 185
Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                      ++ PE I       +SDV+SFG +L E+ T GK+
Sbjct: 186 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       +V E++  G L D + + N  
Sbjct: 68  DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE 125
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + RD+      V +N  + +  FG    
Sbjct: 126 EVTAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRL 179
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 180 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 37/165 (22%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLE--------PFLM 145
           + + H++I++F G C E    ++VFE++  G L    R H P+   L         P  +
Sbjct: 75  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG----------- 193
              L VA ++A  + YL  G     V RD+      V     + IG FG           
Sbjct: 135 GQLLAVASQVAAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY 191
Query: 194 -----------FIAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
                      ++ PE I       +SDV+SFG +L E+ T GK+
Sbjct: 192 RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
           D +  EE+      A   ++ H N+++ +G C       ++ EF+  G L D + + N  
Sbjct: 295 DTMEVEEF--LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 352
Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---- 193
           ++   ++   L +A +I++A+ YL     +  + R++      V +N  + +  FG    
Sbjct: 353 EVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
Query: 194 -----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                            + APE +     + KSDV++FG LL E+ T
Sbjct: 407 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 174
           +P +V E+V   TL D +H        P   K  ++V   IA+A   L+      I+ RD
Sbjct: 90  LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 175 IKPFT------------------------THVNDNDKLIGTFGFIAPECITTGNCNEKSD 210
           +KP                            V     +IGT  +++PE     + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 211 VYSFGALLLELLTGK 225
           VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 174
           +P +V E+V   TL D +H        P   K  ++V   IA+A   L+      I+ RD
Sbjct: 90  LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 175 IKPFT------------------------THVNDNDKLIGTFGFIAPECITTGNCNEKSD 210
           +KP                            V     +IGT  +++PE     + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 211 VYSFGALLLELLTGK 225
           VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 174
           +P +V E+V   TL D +H        P   K  ++V   IA+A   L+      I+ RD
Sbjct: 90  LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 175 IKPFT------------------------THVNDNDKLIGTFGFIAPECITTGNCNEKSD 210
           +KP                            V     +IGT  +++PE     + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 211 VYSFGALLLELLTGK 225
           VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 174
           +P +V E+V   TL D +H        P   K  ++V   IA+A   L+      I+ RD
Sbjct: 90  LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 175 IKPFT------------------------THVNDNDKLIGTFGFIAPECITTGNCNEKSD 210
           +KP                            V     +IGT  +++PE     + + +SD
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 211 VYSFGALLLELLTGK 225
           VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 26/131 (19%)
Query: 112 ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIV 171
           +T+   +  EF   GTL   I    G +L+  L    L++  +I   V Y+H   S+ ++
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA---LELFEQITKGVDYIH---SKKLI 158
Query: 172 FRDIKPFTTHVNDNDKL-IGTFG-------------------FIAPECITTGNCNEKSDV 211
            RD+KP    + D  ++ IG FG                   +++PE I++ +  ++ D+
Sbjct: 159 HRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDL 218
Query: 212 YSFGALLLELL 222
           Y+ G +L ELL
Sbjct: 219 YALGLILAELL 229

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 174
           +P +V E+V   TL D +H        P   K  ++V   IA+A   L+      I+ RD
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 158
Query: 175 IKPFT------------------------THVNDNDKLIGTFGFIAPECITTGNCNEKSD 210
           +KP                            V     +IGT  +++PE     + + +SD
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 211 VYSFGALLLELLTGK 225
           VYS G +L E+LTG+
Sbjct: 219 VYSLGCVLYEVLTGE 233

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 46/177 (25%)
Query: 79  DNLNTEEYY--CFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPN 136
           DN N E+++   +N I+    + H NI+K      + +   LV EF   G L        
Sbjct: 82  DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-------- 133
Query: 137 GSQLEPFLMKHRLK------VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-- 188
               E  + +H+        +  +I + + YLH      IV RDIKP    + + + L  
Sbjct: 134 ---FEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLN 187
Query: 189 ---------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
                                +GT  +IAPE +     NEK DV+S G ++  LL G
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 29/152 (19%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++SH  +++  G CLE     LV EF+  G L+D +    G     F  +  L + +++ 
Sbjct: 59  KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG----LFAAETLLGMCLDVC 114
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------F 194
             +AYL       ++ RD+      V +N  + +  FG                     +
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 171
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 34/162 (20%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N +    +  H NIL F+G     ++ I V ++    +L   +H         F M   +
Sbjct: 53  NEVGVLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHIIETK----FEMIKLI 107
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDN---------------D 186
            +A + A  + YLH   ++ I+ RD+K          T  + D                +
Sbjct: 108 DIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 187 KLIGTFGFIAPECITTGNCNE---KSDVYSFGALLLELLTGK 225
           +L G+  ++APE I   + N    +SDVY+FG +L EL+TG+
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 43/165 (26%)
Query: 94  FASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 153
           +A+ +  +N +K +    +     +  E+   GTL D IH  N +Q          ++  
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR----DEYWRLFR 123
Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------------- 193
           +I  A++Y+H   S+ I+ RD+KP    ++++  + IG FG                   
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 194 ---------------FIAPECIT-TGNCNEKSDVYSFGALLLELL 222
                          ++A E +  TG+ NEK D+YS G +  E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRD 174
           +P +V E+V   TL D +H        P   K  ++V   IA+A   L+      I+ RD
Sbjct: 90  LPYIVMEYVDGVTLRDIVHTEG-----PMTPKRAIEV---IADACQALNFSHQNGIIHRD 141
Query: 175 IKPFT------------------------THVNDNDKLIGTFGFIAPECITTGNCNEKSD 210
           +KP                            V     +IGT  +++PE     + + +SD
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 211 VYSFGALLLELLTGK 225
           VYS G +L E+LTG+
Sbjct: 202 VYSLGCVLYEVLTGE 216

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 90  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 141
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND----NDKLIGTFG-------- 193
           ++A  + +L    S+  V RD+        + FT  V D     D L   F         
Sbjct: 142 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGA 198
Query: 194 -----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L    +   LK +++
Sbjct: 69  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 125
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-----------------FIA 196
           +  A+ YL        V RD+      V+ DN   +  FG                 + A
Sbjct: 126 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 182
Query: 197 PECITTGNCNEKSDVYSFGALLLELLT 223
           PE +     + KSDV+SFG LL E+ +
Sbjct: 183 PEALREKKFSTKSDVWSFGILLWEIYS 209

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 88  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 139
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 140 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGA 196
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L    +   LK +++
Sbjct: 60  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 116
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-----------------FIA 196
           +  A+ YL        V RD+      V+ DN   +  FG                 + A
Sbjct: 117 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 173
Query: 197 PECITTGNCNEKSDVYSFGALLLELLT 223
           PE +     + KSDV+SFG LL E+ +
Sbjct: 174 PEALREAAFSTKSDVWSFGILLWEIYS 200

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L    +   LK +++
Sbjct: 54  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 110
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-----------------FIA 196
           +  A+ YL        V RD+      V+ DN   +  FG                 + A
Sbjct: 111 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 167
Query: 197 PECITTGNCNEKSDVYSFGALLLELLT 223
           PE +     + KSDV+SFG LL E+ +
Sbjct: 168 PEALREKKFSTKSDVWSFGILLWEIYS 194

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L    +   LK +++
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 297
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-----------------FIA 196
           +  A+ YL        V RD+      V+ DN   +  FG                 + A
Sbjct: 298 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 354
Query: 197 PECITTGNCNEKSDVYSFGALLLELLT 223
           PE +     + KSDV+SFG LL E+ +
Sbjct: 355 PEALREKKFSTKSDVWSFGILLWEIYS 381

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 21/139 (15%)
Query: 98  MSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           + H  ++K       T+ PI ++ EF+A G+L D +    GS+ +P  +   +  + +IA
Sbjct: 234 LQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSK-QP--LPKLIDFSAQIA 288
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG-----------FIAPECITTGN 204
             +A++     R  + RD++     V+ +    I  FG           + APE I  G+
Sbjct: 289 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGS 345
Query: 205 CNEKSDVYSFGALLLELLT 223
              KSDV+SFG LL+E++T
Sbjct: 346 FTIKSDVWSFGILLMEIVT 364

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 84  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 135
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 136 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 192
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 74  ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH 133
           IS+      T++      +    Q+ H NI+K      +     LV E    G L D I 
Sbjct: 65  ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI- 123
Query: 134 DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------- 177
                  + F      ++  ++ + + Y+H      IV RD+KP                
Sbjct: 124 ----ISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 176
Query: 178 ----FTTHVNDNDKL---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
                +TH   + K+   IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 177 IDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 89  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 141 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 81  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 132
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 133 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 189
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 87  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 138
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 139 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 195
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 89  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 141 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 159
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 160 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 216
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 217 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 158
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 159 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 215
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 216 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 88  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 139
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 140 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 196
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 86  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 137
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + YL    S+  V RD+        + FT  V D        DK   +       
Sbjct: 138 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 194
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 32/166 (19%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
            T++      +    Q+ H NI+K      +     LV E    G L D I        +
Sbjct: 91  KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRK 145
Query: 142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTH 181
            F      ++  ++ + + Y+H      IV RD+KP                     +TH
Sbjct: 146 RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 202
Query: 182 VNDNDKL---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
              + K+   IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 32/166 (19%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
            T++      +    Q+ H NI+K      +     LV E    G L D I        +
Sbjct: 90  KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRK 144
Query: 142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTH 181
            F      ++  ++ + + Y+H      IV RD+KP                     +TH
Sbjct: 145 RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 201
Query: 182 VNDNDKL---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
              + K+   IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 32/166 (19%)
Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
            T++      +    Q+ H NI+K      +     LV E    G L D I        +
Sbjct: 67  KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRK 121
Query: 142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTH 181
            F      ++  ++ + + Y+H      IV RD+KP                     +TH
Sbjct: 122 RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 182 VNDNDKL---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
              + K+   IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 33/171 (19%)
Query: 77  FGDNLNTE--EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI-- 132
           F   L  E  E+     I   S + H NIL+      + +   L+ EF   G L   +  
Sbjct: 49  FKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK 108
Query: 133 HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------- 177
           H     Q     M+       E+A+A+ Y H    R ++ RDIKP               
Sbjct: 109 HGRFDEQRSATFME-------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIAD 158
Query: 178 --FTTHVND--NDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             ++ H        + GT  ++ PE I     +EK D++  G L  E L G
Sbjct: 159 FGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 89  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + +L    S+  V RD+        + FT  V D        DK   +       
Sbjct: 141 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 33/171 (19%)
Query: 77  FGDNLNTE--EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI-- 132
           F   L  E  E+     I   S + H NIL+      + +   L+ EF   G L   +  
Sbjct: 48  FKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK 107
Query: 133 HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------- 177
           H     Q     M+       E+A+A+ Y H    R ++ RDIKP               
Sbjct: 108 HGRFDEQRSATFME-------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIAD 157
Query: 178 --FTTHVND--NDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             ++ H        + GT  ++ PE I     +EK D++  G L  E L G
Sbjct: 158 FGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 87  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 138
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + +L    S+  V RD+        + FT  V D        DK   +       
Sbjct: 139 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 195
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 94  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 145
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + +L    S+  V RD+        + FT  V D        DK   +       
Sbjct: 146 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 202
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 90  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 141
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + +L    S+  V RD+        + FT  V D        DK   +       
Sbjct: 142 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 198
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 89  SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 140
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + +L    S+  V RD+        + FT  V D        DK   +       
Sbjct: 141 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 41/155 (26%)
Query: 99  SHKNILKFVGCCLETE-VPILVFEFVACGTLADRI----HDPNGSQLEPFLMKHRLKVAM 153
           SH N+L  +G CL +E  P++V  ++  G L + I    H+P    L  F         +
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF--------GL 199
Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVND-------NDKLIGTF------ 192
           ++A  + +L    S+  V RD+        + FT  V D        DK   +       
Sbjct: 200 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256
Query: 193 ----GFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                ++A E + T     KSDV+SFG LL EL+T
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 30/147 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q SH NI++ +G C + +   +V E V  G     +    G++L    +K  L++  + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT-EGARLR---VKTLLQMVGDAA 223
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------- 193
             + YL    S+  + RD+      V + + L I  FG                      
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLE 220
           + APE +  G  + +SDV+SFG LL E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWE 307

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 30/147 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q SH NI++ +G C + +   +V E V  G     +    G++L    +K  L++  + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT-EGARLR---VKTLLQMVGDAA 223
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---------------------- 193
             + YL    S+  + RD+      V + + L I  FG                      
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLE 220
           + APE +  G  + +SDV+SFG LL E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWE 307

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 32/150 (21%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + A+++A 
Sbjct: 72  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 126
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +   D + IG FG +                     
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SD + FG  L E+ T
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 32/150 (21%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + A+++A 
Sbjct: 72  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 126
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +   D + IG FG +                     
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 183
Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SD + FG  L E+ T
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 32/150 (21%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + A+++A 
Sbjct: 78  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 132
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +   D + IG FG +                     
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 189
Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SD + FG  L E+ T
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 32/150 (21%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + A+++A 
Sbjct: 78  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 132
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +   D + IG FG +                     
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 189
Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SD + FG  L E+ T
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 30/157 (19%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           N IA   ++ H+NI+        T    LV + V+ G L DRI +  G   E    K   
Sbjct: 55  NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTE----KDAS 109
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTHVNDNDKLI----------------- 189
            V  ++ +AV YLH      IV RD+KP         +N K++                 
Sbjct: 110 LVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMST 166
Query: 190 --GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             GT G++APE +     ++  D +S G +   LL G
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 68/165 (41%), Gaps = 43/165 (26%)
Query: 94  FASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 153
           +A+ +  +N +K +    +     +  E+    TL D IH  N +Q          ++  
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD----EYWRLFR 123
Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------- 188
           +I  A++Y+H   S+ I+ RD+KP    ++++  +                         
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 189 ----------IGTFGFIAPECIT-TGNCNEKSDVYSFGALLLELL 222
                     IGT  ++A E +  TG+ NEK D+YS G +  E++
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 32/150 (21%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + A+++A 
Sbjct: 68  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 122
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +   D + IG FG +                     
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SD + FG  L E+ T
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 27/159 (16%)
Query: 85  EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL 144
           E+     I   + + H NIL+      +     L+ E+   G L   +          F 
Sbjct: 67  EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT-----FD 121
Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVND--N 185
            +    +  E+A+A+ Y H    + ++ RDIKP                 ++ H      
Sbjct: 122 EQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR 178
Query: 186 DKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             + GT  ++ PE I     NEK D++  G L  ELL G
Sbjct: 179 KTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVG 217

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 32/156 (20%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +    ++ H NI+K      ++    +V E    G L D I      + + F      ++
Sbjct: 72  VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARI 126
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL--- 188
             ++ + + Y+H      IV RD+KP                     +T    N K+   
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 184 IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 31/156 (19%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
           S+++H+NI++ +G  L++    ++ E +A G L    R   P  SQ     M   L VA 
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLIGTFG---------------- 193
           +IA    YL        + RDI       T         IG FG                
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 194 ------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                 ++ PE    G    K+D +SFG LL E+ +
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 32/156 (20%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +    ++ H NI+K      ++    +V E    G L D I      + + F      ++
Sbjct: 72  VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARI 126
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL--- 188
             ++ + + Y+H      IV RD+KP                     +T    N K+   
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 184 IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 31  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 90
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 91  IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 147
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 148 DLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSD 207
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 208 VWSFGVVLWEIAT 220

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 33  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 92
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 93  IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 149
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 150 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 209
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 210 VWSFGVVLWEIAT 222

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 31/156 (19%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
           S+++H+NI++ +G  L++    ++ E +A G L    R   P  SQ     M   L VA 
Sbjct: 89  SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLIGTFG---------------- 193
           +IA    YL        + RDI       T         IG FG                
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 194 ------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                 ++ PE    G    K+D +SFG LL E+ +
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 32/150 (21%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + A+++A 
Sbjct: 68  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 122
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +   D + IG FG +                     
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA 179
Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SD + FG  L E+ T
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 40  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 99
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 100 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 156
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 157 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 216
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 217 VWSFGVVLWEIAT 229

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 39  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 98
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 99  IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 155
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 156 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 215
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 216 VWSFGVVLWEIAT 228

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 32/150 (21%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + A+++A 
Sbjct: 68  LDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAE 122
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFI--------------------- 195
            + YL    S+  + RD+      +   D + IG FG +                     
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA 179
Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE + T   +  SD + FG  L E+ T
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 33  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 92
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 93  IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 149
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 150 DLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 209
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 210 VWSFGVVLWEIAT 222

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 39  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 98
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 99  IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 155
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 156 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 215
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 216 VWSFGVVLWEIAT 228

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 40  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 99
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 100 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 156
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 157 DLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSD 216
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 217 VWSFGVVLWEIAT 229

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 68  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 127
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 128 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 184
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 185 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 244
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 245 VWSFGVVLWEIAT 257

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 37  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 96
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 97  IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 153
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 154 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 213
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 214 VWSFGVVLWEIAT 226

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 30/156 (19%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    Q+ H+N++  +  C + +   LVFEFV    L D    PNG   +        K 
Sbjct: 75  IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVV-----QKY 129
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN---------------------DKLIG 190
             +I N + + H   S  I+ RDIKP    V+ +                     D  + 
Sbjct: 130 LFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
Query: 191 TFGFIAPECITTGNCNEKS-DVYSFGALLLELLTGK 225
           T  + APE +       K+ DV++ G L+ E+  G+
Sbjct: 187 TRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 36  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 95
Query: 119 VFEFVACGTLADRIHD-----PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L   +        N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 96  IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 152
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 153 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 212
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 213 VWSFGVVLWEIAT 225

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 46  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105
Query: 119 VFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L       R    N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 106 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 162
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 222
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 223 VWSFGVVLWEIAT 235

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 32/156 (20%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +    ++ H NI+K      ++    +V E    G L D I      + + F      ++
Sbjct: 72  VELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARI 126
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL--- 188
             ++ + + Y+H      IV RD+KP                     +T    N K+   
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 184 IGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSG 218

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 69  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 116
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL    ++  + RD+      V N+N   IG FG       
Sbjct: 117 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 173
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 174 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 67  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 114
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL    ++  + RD+      V N+N   IG FG       
Sbjct: 115 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 171
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 172 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++SH  ++KF G C   E PI +V E+++ G L + +   +G  LEP      L++  ++
Sbjct: 59  KLSHPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRS-HGKGLEP---SQLLEMCYDV 113
Query: 156 ANAVAYLHVGFSRPIVFRDI--------KPFTTHVND--------NDKLIGTFG------ 193
              +A+L    S   + RD+        +     V+D        +D+ + + G      
Sbjct: 114 CEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK 170
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE       + KSDV++FG L+ E+ +
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 60  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 107
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL  G  R  + RD+      V N+N   IG FG       
Sbjct: 108 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 164
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 165 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 65  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 112
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL  G  R  + RD+      V N+N   IG FG       
Sbjct: 113 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 170 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 80  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 127
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL  G  R  + RD+      V N+N   IG FG       
Sbjct: 128 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 80  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 127
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL    ++  + RD+      V N+N   IG FG       
Sbjct: 128 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 184
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 185 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 65  GKGFLQDHPISEFGDNLNTEEYYCFNCIAF---ASQMSHKN---ILKFVGCCLETEVPIL 118
            KG ++D P +        E       I F   AS M   N   +++ +G   + +  ++
Sbjct: 46  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105
Query: 119 VFEFVACGTLADRIHD-----PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR 173
           + E +  G L   +        N   L P  +   +++A EIA+ +AYL+   +   V R
Sbjct: 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHR 162
Query: 174 DIKPFTTHVNDNDKL-IGTFG----------------------FIAPECITTGNCNEKSD 210
           D+      V ++  + IG FG                      +++PE +  G     SD
Sbjct: 163 DLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 222
Query: 211 VYSFGALLLELLT 223
           V+SFG +L E+ T
Sbjct: 223 VWSFGVVLWEIAT 235

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 62  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 109
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL  G  R  + RD+      V N+N   IG FG       
Sbjct: 110 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 167 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 68  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 115
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL    ++  + RD+      V N+N   IG FG       
Sbjct: 116 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 172
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 173 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 62  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 109
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL  G  R  + RD+      V N+N   IG FG       
Sbjct: 110 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 167 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 61  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 108
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL  G  R  + RD+      V N+N   IG FG       
Sbjct: 109 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 165
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 166 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 93  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 140
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL    ++  + RD+      V N+N   IG FG       
Sbjct: 141 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 198 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 85  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 62  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 109
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL    ++  + RD+      V N+N   IG FG       
Sbjct: 110 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 93  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 64/148 (43%), Gaps = 28/148 (18%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H  +++        E   ++ E++A G+L D +    G ++   L+   +  + +IA 
Sbjct: 65  LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKV---LLPKLIDFSAQIAE 121
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG---------------------FI 195
            +AY+     +  + RD++     V+++    I  FG                     + 
Sbjct: 122 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 178
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APE I  G    KSDV+SFG LL E++T
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIVT 206

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 93  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 82  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H N++      L  +   +V EF+  G L D +     ++      +  
Sbjct: 90  FNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 143
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDNDK 187
             V + +  A++YLH   ++ ++ RDIK                       +  V     
Sbjct: 144 ATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKX 200
Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 201 LVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 93  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ E++  G+L D            +L KH+ 
Sbjct: 66  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD------------YLQKHKE 113
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL  G  R  + RD+      V N+N   IG FG       
Sbjct: 114 RIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQ 170
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 171 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 32/159 (20%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H N+++     L  E   ++ EF+  G L D +     SQ+   L + +
Sbjct: 90  FNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV-----SQVR--LNEEQ 142
Query: 149 LKVAME-IANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDND 186
           +    E +  A+AYLH   ++ ++ RDIK                       +  V    
Sbjct: 143 IATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199
Query: 187 KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 200 XLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 80  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V RD+      V +D    IG FG                      
Sbjct: 140 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 226

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 78  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRI-----------HDPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +           ++P+ +  E    K  
Sbjct: 86  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V RD+      V +D    IG FG                      
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V RD+      V +D    IG FG                      
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 39/163 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----SQLEPFLMK 146
           IA    + HKNI++++G   E     +  E V  G+L+  +    G      Q   F  K
Sbjct: 56  IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 115
Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND---------------------- 184
                  +I   + YLH      IV RDIK     +N                       
Sbjct: 116 -------QILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 165
Query: 185 NDKLIGTFGFIAPECITTG--NCNEKSDVYSFGALLLELLTGK 225
            +   GT  ++APE I  G     + +D++S G  ++E+ TGK
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 78  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V RD+      V +D    IG FG                      
Sbjct: 138 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 224

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 39/163 (23%)
Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----SQLEPFLMK 146
           IA    + HKNI++++G   E     +  E V  G+L+  +    G      Q   F  K
Sbjct: 70  IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK 129
Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND---------------------- 184
                  +I   + YLH      IV RDIK     +N                       
Sbjct: 130 -------QILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179
Query: 185 NDKLIGTFGFIAPECITTG--NCNEKSDVYSFGALLLELLTGK 225
            +   GT  ++APE I  G     + +D++S G  ++E+ TGK
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V RD+      V +D    IG FG                      
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V RD+      V +D    IG FG                      
Sbjct: 141 DGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 49/166 (29%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR- 148
           I     + H NI+K+ G C         L+ EF+  G+L +            +L KH+ 
Sbjct: 65  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLRE------------YLQKHKE 112
Query: 149 -------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG------- 193
                  L+   +I   + YL    ++  + RD+      V N+N   IG FG       
Sbjct: 113 RIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 169
Query: 194 ----------------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                           + APE +T    +  SDV+SFG +L EL T
Sbjct: 170 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIH-----------DPNGSQLEPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L + +            +P+ +  E    K  
Sbjct: 93  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKLIGTFG-------------- 193
           +  A ++A  + YL    S+  + RD+      V  DN   I  FG              
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG LL E+ T
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 28/148 (18%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H  +++      + E   ++ EF+A G+L D +    G ++   L+   +  + +IA 
Sbjct: 64  LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKV---LLPKLIDFSAQIAE 120
Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-LIGTFG---------------------FI 195
            +AY+     +  + RD++     V+++    I  FG                     + 
Sbjct: 121 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 177
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APE I  G    KS+V+SFG LL E++T
Sbjct: 178 APEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 67  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 126 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APECI     + KSDV+SFG L+ E  +
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 31/149 (20%)
Query: 98  MSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           + H  ++K       T+ PI ++ EF+A G+L D +    GS+ +P  +   +  + +IA
Sbjct: 240 LQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSK-QP--LPKLIDFSAQIA 294
Query: 157 NAVAYLHVGFSRPIVFRDIKPFT----------------THVNDNDKLIGTFG------F 194
             +A++     R  + RD++                     V ++++     G      +
Sbjct: 295 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLT 223
            APE I  G+   KSDV+SFG LL+E++T
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H +I++ +G C  + +  LV +++  G+L D +    G+ L P L+   L   ++IA 
Sbjct: 72  LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA-LGPQLL---LNWGVQIAK 126
Query: 158 AVAYL--HVGFSRPIVFRDI---KPFTTHVND---------NDKLI------GTFGFIAP 197
            + YL  H    R +  R++    P    V D         +DK +          ++A 
Sbjct: 127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 198 ECITTGNCNEKSDVYSFGALLLELLT 223
           E I  G    +SDV+S+G  + EL+T
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMT 212

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAME 154
           Q  H NI++  G      + ++V E++  G+L    R HD   + ++   M   +   M 
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 155 IANAVAYLHVGFSRPIVFRD------IKPFTTHV---NDNDKLIGTFG------FIAPEC 199
             + + Y+H   +   V  D      +  F       +D D    T G      + APE 
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 200 ITTGNCNEKSDVYSFGALLLELLT 223
           I     +  SDV+SFG ++ E+L 
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 37/154 (24%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH---DPNGSQLEPFLMKHRLKVA 152
           + M H ++++ +G CL   +  LV + +  G L + +H   D  GSQL        L   
Sbjct: 72  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL-------LLNWC 123
Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKLIGTFG------------------ 193
           ++IA  + YL     R +V RD+      V   N   I  FG                  
Sbjct: 124 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 180
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               ++A ECI       +SDV+S+G  + EL+T
Sbjct: 181 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           + H +I++ +G C  + +  LV +++  G+L D +    G+ L P L+   L   ++IA 
Sbjct: 90  LDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA-LGPQLL---LNWGVQIAK 144
Query: 158 AVAYL--HVGFSRPIVFRDI---KPFTTHVND---------NDKLI------GTFGFIAP 197
            + YL  H    R +  R++    P    V D         +DK +          ++A 
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 198 ECITTGNCNEKSDVYSFGALLLELLT 223
           E I  G    +SDV+S+G  + EL+T
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMT 230

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAME 154
           Q  H NI++  G      + ++V E++  G+L    R HD   + ++   M   +   M 
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 155 IANAVAYLHVGFSRPIVFRD------IKPFTTHV---NDNDKLIGTFG------FIAPEC 199
             + + Y+H   +   V  D      +  F       +D D    T G      + APE 
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 200 ITTGNCNEKSDVYSFGALLLELLT 223
           I     +  SDV+SFG ++ E+L 
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 37/154 (24%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH---DPNGSQLEPFLMKHRLKVA 152
           + M H ++++ +G CL   +  LV + +  G L + +H   D  GSQL        L   
Sbjct: 95  ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQL-------LLNWC 146
Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKLIGTFG------------------ 193
           ++IA  + YL     R +V RD+      V   N   I  FG                  
Sbjct: 147 VQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK 203
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               ++A ECI       +SDV+S+G  + EL+T
Sbjct: 204 MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 31/149 (20%)
Query: 98  MSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           + H  ++K       T+ PI ++ EF+A G+L D +    GS+ +P  +   +  + +IA
Sbjct: 67  LQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSK-QP--LPKLIDFSAQIA 121
Query: 157 NAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLIGT-----FGF 194
             +A++     R  + RD++                      + DN+            +
Sbjct: 122 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLT 223
            APE I  G+   KSDV+SFG LL+E++T
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIVT 207

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 24/92 (26%)
Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK----LIGTF 192
           E+A A+ +LH   S  I++RD+KP                  +    D++K      GT 
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 191
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +      + +D +SFG L+ E+LTG
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 89  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 149 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 87  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 147 VSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 24/92 (26%)
Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK----LIGTF 192
           E+A A+ +LH   S  I++RD+KP                  +    D++K      GT 
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +      + +D +SFG L+ E+LTG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 35/159 (22%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRI--HDPNGSQLEPFLMKH 147
           I     + H NI+K+ G C         L+ E++  G+L D +  H      ++      
Sbjct: 63  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFG-------------- 193
           ++   ME      Y+H    R +  R+I       N+N   IG FG              
Sbjct: 123 QICKGMEYLGTKRYIH----RNLATRNI----LVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 194 ---------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                    + APE +T    +  SDV+SFG +L EL T
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 33/158 (20%)
Query: 92  IAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           I     + H NI+K+ G C         L+ E++  G+L D +     +  E       L
Sbjct: 65  IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ----AHAERIDHIKLL 120
Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG--------------- 193
           +   +I   + YL  G  R  + RD+      V N+N   IG FG               
Sbjct: 121 QYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   + APE +T    +  SDV+SFG +L EL T
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 92  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 152 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 63  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 121
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 122 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT-GKK 226
           APECI     + KSDV+SFG L+ E  + G+K
Sbjct: 178 APECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 67  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 126 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APECI     + KSDV+SFG L+ E  +
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMWEAFS 209

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 61  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 119
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 120 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APECI     + KSDV+SFG L+ E  +
Sbjct: 176 APECINYYKFSSKSDVWSFGVLMWEAFS 203

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 24/92 (26%)
Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK----LIGTF 192
           E+A A+ +LH   S  I++RD+KP                  +    D++K      GT 
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +      + +D +SFG L+ E+LTG
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 32/165 (19%)
Query: 83  TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP 142
           T++      +    Q+ H NI K      +     LV E    G L D I        + 
Sbjct: 68  TDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKR 122
Query: 143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHV 182
           F      ++  ++ + + Y H      IV RD+KP                     +TH 
Sbjct: 123 FSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179
Query: 183 NDNDKL---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             + K    IGT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 180 EASKKXKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 73  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 131
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 132 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT-GKK 226
           APECI     + KSDV+SFG L+ E  + G+K
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 83  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 142 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT-GKK 226
           APECI     + KSDV+SFG L+ E  + G+K
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 83  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 142 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT-GKK 226
           APECI     + KSDV+SFG L+ E  + G+K
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 81  QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 139
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 140 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 195
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT-GKK 226
           APECI     + KSDV+SFG L+ E  + G+K
Sbjct: 196 APECINYYKFSSKSDVWSFGVLMWEAFSYGQK 227

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 76  EFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPIL--VFEFVACGTLADRIH 133
           ++G     E+    + +    ++ H NI+++    ++     L  V E+   G LA  I 
Sbjct: 40  DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI- 98
Query: 134 DPNGSQLEPFLMKH---RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN------- 183
              G++   +L +    R+   + +A    +        ++ RD+KP    ++       
Sbjct: 99  -TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL 157
Query: 184 -----------DND---KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
                      D D   + +GT  +++PE +   + NEKSD++S G LL EL
Sbjct: 158 GDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 70  QDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLA 129
           Q+  I +       ++    N I    +  + NI+ ++   L  +   +V E++A G+L 
Sbjct: 46  QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 130 DRIHDP--NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------- 177
           D + +   +  Q+          V  E   A+ +LH   S  ++ RDIK           
Sbjct: 106 DVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGS 154
Query: 178 -----------FTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                       T   +   +++GT  ++APE +T      K D++S G + +E++ G+
Sbjct: 155 VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 151
           +SH+ +++  G C +     ++ E++A G L + + +          M+HR      L++
Sbjct: 76  LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 125
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------NDKLIGTFG-- 193
             ++  A+ YL    S+  + RD+      VND                +D+   + G  
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               +  PE +     + KSD+++FG L+ E+ +
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H+N+++     L  +   +V EF+  G L D +     ++      +  
Sbjct: 119 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 172
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTH------------------VNDNDK 187
             V + +  A++ LH   ++ ++ RDIK      TH                  V     
Sbjct: 173 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 229
Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 151
           +SH+ +++  G C +     ++ E++A G L + + +          M+HR      L++
Sbjct: 67  LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 116
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------NDKLIGTFG-- 193
             ++  A+ YL    S+  + RD+      VND                +D+   + G  
Sbjct: 117 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 173
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               +  PE +     + KSD+++FG L+ E+ +
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 151
           +SH+ +++  G C +     ++ E++A G L + + +          M+HR      L++
Sbjct: 61  LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------NDKLIGTFG-- 193
             ++  A+ YL    S+  + RD+      VND                +D+   + G  
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 167
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               +  PE +     + KSD+++FG L+ E+ +
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 37/158 (23%)
Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           HKNI+  +G C +     ++ E+ + G L +  R   P G +          E    K  
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------- 193
           +    ++A  + YL    S+  + RD+      V +N+ + I  FG              
Sbjct: 206 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 194 --------FIAPECITTGNCNEKSDVYSFGALLLELLT 223
                   ++APE +       +SDV+SFG L+ E+ T
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H+N+++     L  +   +V EF+  G L D +     ++      +  
Sbjct: 65  FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 118
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTH------------------VNDNDK 187
             V + +  A++ LH   ++ ++ RDIK      TH                  V     
Sbjct: 119 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 175
Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H+N+++     L  +   +V EF+  G L D +     ++      +  
Sbjct: 69  FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 122
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTH------------------VNDNDK 187
             V + +  A++ LH   ++ ++ RDIK      TH                  V     
Sbjct: 123 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 179
Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 217

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H+N+++     L  +   +V EF+  G L D +     ++      +  
Sbjct: 76  FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 129
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTH------------------VNDNDK 187
             V + +  A++ LH   ++ ++ RDIK      TH                  V     
Sbjct: 130 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 186
Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 224

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 82  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V R++      V +D    IG FG                      
Sbjct: 142 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H+N+++     L  +   +V EF+  G L D +     ++      +  
Sbjct: 74  FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 127
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTH------------------VNDNDK 187
             V + +  A++ LH   ++ ++ RDIK      TH                  V     
Sbjct: 128 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 184
Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 222

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 151
           +SH+ +++  G C +     ++ E++A G L + + +          M+HR      L++
Sbjct: 60  LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 109
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------NDKLIGTFG-- 193
             ++  A+ YL    S+  + RD+      VND                +D+   + G  
Sbjct: 110 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 166
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               +  PE +     + KSD+++FG L+ E+ +
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 24/92 (26%)
Query: 154 EIANAVAYLHVGFSRPIVFRDIKP------FTTHVNDND---------------KLIGTF 192
           EI+ A+ +LH    + I++RD+KP         HV   D                  GT 
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTI 185
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +     N   D +S GAL+ ++LTG
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 151
           +SH+ +++  G C +     ++ E++A G L + + +          M+HR      L++
Sbjct: 56  LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 105
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------NDKLIGTFG-- 193
             ++  A+ YL    S+  + RD+      VND                +D+   + G  
Sbjct: 106 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 162
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               +  PE +     + KSD+++FG L+ E+ +
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 24/92 (26%)
Query: 154 EIANAVAYLHVGFSRPIVFRDIKP------FTTHVNDND---------------KLIGTF 192
           EI+ A+ +LH    + I++RD+KP         HV   D                  GT 
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTI 185
Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +     N   D +S GAL+ ++LTG
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 31/150 (20%)
Query: 102 NILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLKVAMEIA 156
           ++++ +G   + +  ++V E +A G L       R    N     P  ++  +++A EIA
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHV-NDNDKLIGTFG---------------------- 193
           + +AYL+   ++  V R++      V +D    IG FG                      
Sbjct: 141 DGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           ++APE +  G     SD++SFG +L E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 15/150 (10%)
Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDP--NGSQLEPFLMKH 147
           N I+  +Q+ H N+++           +LV E+V  G L DRI D   N ++L+  L   
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 148 RLKVAMEIANAVAYLHVGFSRPIVF---RDIKP-------FTTHVNDNDKLIGTFG---F 194
           ++   +   + +  LH+      +    RD K                +KL   FG   F
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEF 254
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +APE +     +  +D++S G +   LL+G
Sbjct: 255 LAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 32/174 (18%)
Query: 74  ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--R 131
           +S  G   N +       + F  ++ H N +++ GC L      LV E+   G+ +D   
Sbjct: 87  MSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLE 145
Query: 132 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVN 183
           +H     ++E   + H           +AYLH   S  ++ RD+K        P    + 
Sbjct: 146 VHKKPLQEVEIAAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLG 196
Query: 184 D---------NDKLIGTFGFIAPECITT---GNCNEKSDVYSFGALLLELLTGK 225
           D          +  +GT  ++APE I     G  + K DV+S G   +EL   K
Sbjct: 197 DFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 34/179 (18%)
Query: 70  QDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLA 129
           Q+  I +       ++    N I    +  + NI+ ++   L  +   +V E++A G+L 
Sbjct: 47  QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 106
Query: 130 DRIHDP--NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------- 177
           D + +   +  Q+          V  E   A+ +LH   S  ++ RDIK           
Sbjct: 107 DVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGS 155
Query: 178 -----------FTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                       T   +    ++GT  ++APE +T      K D++S G + +E++ G+
Sbjct: 156 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 34/179 (18%)
Query: 70  QDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLA 129
           Q+  I +       ++    N I    +  + NI+ ++   L  +   +V E++A G+L 
Sbjct: 46  QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 130 DRIHDP--NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------- 177
           D + +   +  Q+          V  E   A+ +LH   S  ++ RDIK           
Sbjct: 106 DVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGS 154
Query: 178 -----------FTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                       T   +    ++GT  ++APE +T      K D++S G + +E++ G+
Sbjct: 155 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 32/174 (18%)
Query: 74  ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--R 131
           +S  G   N +       + F  ++ H N +++ GC L      LV E+   G+ +D   
Sbjct: 48  MSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-CLGSASDLLE 106
Query: 132 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK--------PFTTHVN 183
           +H     ++E   + H           +AYLH   S  ++ RD+K        P    + 
Sbjct: 107 VHKKPLQEVEIAAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLG 157
Query: 184 D---------NDKLIGTFGFIAPECITT---GNCNEKSDVYSFGALLLELLTGK 225
           D          +  +GT  ++APE I     G  + K DV+S G   +EL   K
Sbjct: 158 DFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 426 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 484
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 485 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APECI     + KSDV+SFG L+ E  +
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMWEAFS 568

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL-MKHRLKVAME 154
            Q+ +  I++ +G C E E  +LV E    G L   +      + +  + + H++ + M+
Sbjct: 425 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 483
Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTH--------------VNDNDKLIGTFG-----FI 195
                 ++H    R +  R++   T H               ++N     T G     + 
Sbjct: 484 YLEESNFVH----RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 196 APECITTGNCNEKSDVYSFGALLLELLT 223
           APECI     + KSDV+SFG L+ E  +
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMWEAFS 567

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 151
           +SH+ +++  G C +     ++ E++A G L + + +          M+HR      L++
Sbjct: 76  LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 125
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------NDKLIGTFG-- 193
             ++  A+ YL    S+  + RD+      VND                +D+   + G  
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSK 182
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               +  PE +     + KSD+++FG L+ E+ +
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/179 (20%), Positives = 72/179 (40%), Gaps = 34/179 (18%)
Query: 70  QDHPISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLA 129
           Q+  I +       ++    N I    +  + NI+ ++   L  +   +V E++A G+L 
Sbjct: 46  QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105
Query: 130 DRIHDP--NGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------- 177
           D + +   +  Q+          V  E   A+ +LH   S  ++ RDIK           
Sbjct: 106 DVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGS 154
Query: 178 -----------FTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                       T   +    ++GT  ++APE +T      K D++S G + +E++ G+
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 76  EFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPIL--VFEFVACGTLADRIH 133
           ++G     E+    + +    ++ H NI+++    ++     L  V E+   G LA  I 
Sbjct: 40  DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI- 98
Query: 134 DPNGSQLEPFLMKH---RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN--DNDKL 188
              G++   +L +    R+   + +A    +        ++ RD+KP    ++   N KL
Sbjct: 99  -TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL 157
Query: 189 -------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
                              +GT  +++PE +   + NEKSD++S G LL EL
Sbjct: 158 GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 26/94 (27%)
Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-----------------------DKLIG 190
           EI +A+ YLH    + I+ RD+KP    +N++                       +  +G
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           T  +++PE +T  + ++ SD+++ G ++ +L+ G
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 28/172 (16%)
Query: 76  EFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPIL--VFEFVACGTLADRIH 133
           ++G     E+    + +    ++ H NI+++    ++     L  V E+   G LA  I 
Sbjct: 40  DYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVI- 98
Query: 134 DPNGSQLEPFLMKH---RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN--DNDKL 188
              G++   +L +    R+   + +A    +        ++ RD+KP    ++   N KL
Sbjct: 99  -TKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKL 157
Query: 189 -------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLEL 221
                              +GT  +++PE +   + NEKSD++S G LL EL
Sbjct: 158 GDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR------LKV 151
           +SH+ +++  G C +     ++ E++A G L + + +          M+HR      L++
Sbjct: 61  LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND----------------NDKLIGTFG-- 193
             ++  A+ YL    S+  + RD+      VND                +D+   + G  
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSK 167
Query: 194 ----FIAPECITTGNCNEKSDVYSFGALLLELLT 223
               +  PE +     + KSD+++FG L+ E+ +
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H+ +++       +E PI +V E+++ G+L D +    G  L    +   + +A +I
Sbjct: 235 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 289
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------- 193
           A+ +AY+        V RD++     V +N    +  FG                     
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE    G    KSDV+SFG LL EL T
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 31/150 (20%)
Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H+ +++       +E PI +V E+++ G+L D +    G  L    +   + +A +I
Sbjct: 235 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLR---LPQLVDMAAQI 289
Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------- 193
           A+ +AY+        V RD++     V +N    +  FG                     
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346
Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE    G    KSDV+SFG LL EL T
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG--SQLEPFLMKHRLKVAME 154
           Q SH NI++  G   + +  +++ E++  G L   + + +G  S L+   M   +   M+
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 155 IANAVAYLH--------------------VGFSRPIVFRDIKPFTTHVNDNDKLIGTFGF 194
               + Y+H                     G SR  V  D  P  T+     K+     +
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR--VLED-DPEATYTTSGGKI--PIRW 216
Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLT 223
            APE I+       SDV+SFG ++ E++T
Sbjct: 217 TAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           FN +       H+N+++     L  +   +V EF+  G L D +     ++      +  
Sbjct: 196 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE------EQI 249
Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTH------------------VNDNDK 187
             V + +  A++ LH   ++ ++ RDIK      TH                  V     
Sbjct: 250 AAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKX 306
Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           L+GT  ++APE I+      + D++S G +++E++ G+
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	227
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-37
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-36
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-35
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-31
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-30
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	6e-30
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-29
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-28
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-25
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-24
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-23
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-23
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-23
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-20
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-19
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-18
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-18
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-18
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-17
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-16
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-16
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-15
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-15
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-15
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-15
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-13
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-13
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-13
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-13
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-13
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-13
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-13
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	7e-13
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-13
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	9e-13
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-12
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-12
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-12
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	1e-12
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-12
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-12
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-12
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-12
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-12
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-12
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-12
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-12
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-12
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-12
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-12
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	9e-12
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-11
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-11
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-11
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-11
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-11
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-11
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-11
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-11
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-11
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-11
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-11
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-11
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	5e-11
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-11
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	7e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	8e-11
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	9e-11
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	9e-11
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	9e-11
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-10
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-10
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-10
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-10
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-10
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-10
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-10
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-10
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-10
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	6e-10
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	8e-10
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-09
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-09
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-09
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-09
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-09
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	5e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-09
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-09
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-09
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	9e-09
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-08
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-08
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-08
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-08
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	8e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-07
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	9e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-06
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-06
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	6e-06
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-06
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-06
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-05
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	8e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	9e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	3e-04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	6e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	8e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	8e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  131 bits (333), Expect = 2e-37
 Identities = 59/230 (25%), Positives = 88/230 (38%), Gaps = 68/230 (29%)

Query: 48  RNFIALELEGATNNYDPG------------KGFLQD---------HPIS-----EFGDNL 81
                ++LE ATNN+D              KG L+D          P S     EF    
Sbjct: 27  YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF---- 82

Query: 82  NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE 141
            TE       I   S   H +++  +G C E    IL+++++  G L   ++  +     
Sbjct: 83  ETE-------IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT-M 134

Query: 142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIK------------------------- 176
               + RL++ +  A  + YLH      I+ RD+K                         
Sbjct: 135 SMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTE 191

Query: 177 PFTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
              TH++   K  GT G+I PE    G   EKSDVYSFG +L E+L  + 
Sbjct: 192 LDQTHLSTVVK--GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARS 239

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  129 bits (326), Expect = 1e-36
 Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 79/233 (33%)

Query: 54  ELEGATNNYDPG------------------KGFLQDHPI-----------------SEFG 78
           EL+  TNN+D                    KG++ +  +                  +F 
Sbjct: 19  ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQF- 77

Query: 79  DNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS 138
              + E       I   ++  H+N+++ +G   + +   LV+ ++  G+L DR+   +G+
Sbjct: 78  ---DQE-------IKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127

Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------F----- 178
               + M  R K+A   AN + +LH       + RDIK                F     
Sbjct: 128 PPLSWHM--RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARA 182

Query: 179 -----TTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                 T +    +++GT  ++APE +  G    KSD+YSFG +LLE++TG  
Sbjct: 183 SEKFAQTVM--TSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEIITGLP 232

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  126 bits (320), Expect = 2e-35
 Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 61/222 (27%)

Query: 54  ELEGATNNYDPG------------KGFLQDHPI---------------SEFGDNLNTEEY 86
           EL+ A++N+               KG L D  +                +F     TE  
Sbjct: 24  ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQF----QTE-- 77

Query: 87  YCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK 146
                +   S   H+N+L+  G C+     +LV+ ++A G++A  + +   SQ  P    
Sbjct: 78  -----VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PLDWP 131

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVND---------ND--- 186
            R ++A+  A  +AYLH      I+ RD+K         F   V D          D   
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 191

Query: 187 --KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
              + GT G IAPE ++TG  +EK+DV+ +G +LLEL+TG++
Sbjct: 192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 233

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  115 bits (290), Expect = 3e-31
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 23/150 (15%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           S+++H NI+K  G CL      LV E+   G+L + +H      L  +   H +   ++ 
Sbjct: 56  SRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQC 111

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI-------------------GTFGFIA 196
           +  VAYLH    + ++ RD+KP    +     ++                   G+  ++A
Sbjct: 112 SQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMA 171

Query: 197 PECITTGNCNEKSDVYSFGALLLELLTGKK 226
           PE     N +EK DV+S+G +L E++T +K
Sbjct: 172 PEVFEGSNYSEKCDVFSWGIILWEVITRRK 201

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  111 bits (280), Expect = 4e-30
 Identities = 29/151 (19%), Positives = 59/151 (39%), Gaps = 25/151 (16%)

Query: 96  SQMSHKNILKFVGCCLETEVPIL--VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 153
              SH N+L  +G C     P    +  ++  G+L + +H+     ++       +K A+
Sbjct: 62  RIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ---SQAVKFAL 118

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP--------FTTHVND--------NDKLIGTFGFIAP 197
           ++A  +A+LH      I    +           T  ++         +   +    ++AP
Sbjct: 119 DMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAP 177

Query: 198 ECIT---TGNCNEKSDVYSFGALLLELLTGK 225
           E +           +D++SF  LL EL+T +
Sbjct: 178 EALQKKPEDTNRRSADMWSFAVLLWELVTRE 208

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  111 bits (279), Expect = 6e-30
 Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 32/156 (20%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           S ++H NI+K  G       P +V EFV CG L  R+ D       P     +L++ ++I
Sbjct: 78  SNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDI 131

Query: 156 ANAVAYLHVGFSRPIVFRDIKP-------------FTTHVND----------NDKLIGTF 192
           A  + Y+    + PIV RD++                  V D             L+G F
Sbjct: 132 ALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNF 190

Query: 193 GFIAPECITTGN--CNEKSDVYSFGALLLELLTGKK 226
            ++APE I        EK+D YSF  +L  +LTG+ 
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  109 bits (275), Expect = 5e-29
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 24/151 (15%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            ++ H NI+ F+G   +     +V E+++ G+L   +H       E    + RL +A ++
Sbjct: 89  KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR--EQLDERRRLSMAYDV 146

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGF 194
           A  + YLH   + PIV R++K     V+    +                      GT  +
Sbjct: 147 AKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEW 205

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           +APE +     NEKSDVYSFG +L EL T +
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  106 bits (266), Expect = 5e-28
 Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 33/157 (21%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           + + H NI+   G CL+     LV EF   G L   +                +  A++I
Sbjct: 61  AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP------PDILVNWAVQI 114

Query: 156 ANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDNDKL------------------- 188
           A  + YLH     PI+ RD+K                N  L                   
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA 174

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            G + ++APE I     ++ SDV+S+G LL ELLTG+
Sbjct: 175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 99.7 bits (249), Expect = 3e-25
 Identities = 32/164 (19%), Positives = 57/164 (34%), Gaps = 41/164 (25%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            Q  H+N++ F+G C+      ++       TL   + D          +    ++A EI
Sbjct: 84  RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK----IVLDVNKTRQIAQEI 139

Query: 156 ANAVAYLHVGFSRPIVFRDIKP----------------------FTTHVNDNDKL---IG 190
              + YLH   ++ I+ +D+K                               DKL    G
Sbjct: 140 VKGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNG 196

Query: 191 TFGFIAPECITTGN---------CNEKSDVYSFGALLLELLTGK 225
               +APE I   +          ++ SDV++ G +  EL   +
Sbjct: 197 WLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 97.8 bits (244), Expect = 1e-24
 Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 36/157 (22%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
            +  H NIL F+G    T   + +V ++    +L   +H         F MK  + +A +
Sbjct: 75  RKTRHVNILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHASETK----FEMKKLIDIARQ 128

Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGT 191
            A  + YLH   ++ I+ RD+K     +++++ +                        G+
Sbjct: 129 TARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185

Query: 192 FGFIAPECITTGN---CNEKSDVYSFGALLLELLTGK 225
             ++APE I   +    + +SDVY+FG +L EL+TG+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 95.2 bits (237), Expect = 1e-23
 Identities = 36/174 (20%), Positives = 58/174 (33%), Gaps = 45/174 (25%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVP----ILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           +     M H+NIL+F+G             L+  F   G+L+D +               
Sbjct: 69  VYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA------NVVSWNE 122

Query: 148 RLKVAMEIANAVAYLH------VGFSRP-IVFRDIK-----------------------P 177
              +A  +A  +AYLH          +P I  RDIK                        
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182

Query: 178 FTTHVNDNDKLIGTFGFIAPECI-----TTGNCNEKSDVYSFGALLLELLTGKK 226
                 D    +GT  ++APE +        +   + D+Y+ G +L EL +   
Sbjct: 183 AGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCT 236

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 93.9 bits (234), Expect = 4e-23
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 42/166 (25%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
             + H N+LKF+G   + +    + E++  GTL   I   +      +    R+  A +I
Sbjct: 62  RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSFAKDI 117

Query: 156 ANAVAYLHVGFSRPIVFRDIK--------------------------PFTTHVNDNDK-- 187
           A+ +AYLH   S  I+ RD+                                   + K  
Sbjct: 118 ASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKP 174

Query: 188 -------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                  ++G   ++APE I   + +EK DV+SFG +L E++    
Sbjct: 175 DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN 220

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 85.5 bits (212), Expect = 4e-20
 Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 46/173 (26%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI----LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           +     + H+NIL F+   + +        L+  +   G+L D +               
Sbjct: 53  LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT------TLDTVS 106

Query: 148 RLKVAMEIANAVAYLH-----VGFSRPIVFRDIKP------------------------- 177
            L++ + IA+ +A+LH           I  RD+K                          
Sbjct: 107 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166

Query: 178 FTTHVNDNDKLIGTFGFIAPECI------TTGNCNEKSDVYSFGALLLELLTG 224
                  N+  +GT  ++APE +         +  ++ D+++FG +L E+   
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 85.7 bits (212), Expect = 2e-19
 Identities = 37/153 (24%), Positives = 58/153 (37%), Gaps = 32/153 (20%)

Query: 94  FASQMSHKNILK---FV--GCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           F +++ H +I++   FV         V  +V E+V   +L           L        
Sbjct: 132 FLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK----LPV---AEA 184

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------F--TTHVNDNDKLIGTF 192
           +   +EI  A++YLH   S  +V+ D+KP                  + +N    L GT 
Sbjct: 185 IAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTP 241

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           GF APE I        +D+Y+ G  L  L    
Sbjct: 242 GFQAPE-IVRTGPTVATDIYTVGRTLAALTLDL 273

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 82.0 bits (203), Expect = 6e-19
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 31/158 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVP----ILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
                 + H NI++F      T       +LV E +  GTL   +            +K 
Sbjct: 76  AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-----VMKIKV 130

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTHVNDNDKL---------------- 188
                 +I   + +LH   + PI+ RD+K    F T    + K+                
Sbjct: 131 LRSWCRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA 189

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            IGT  F+APE       +E  DVY+FG  +LE+ T +
Sbjct: 190 VIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSE 226

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 81.8 bits (202), Expect = 1e-18
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 53/183 (28%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-----LVFEFVACGTLADRIHDPNGSQLEPFLMK 146
           I     M H NI +F+               LV E+   G+L   +              
Sbjct: 58  IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD------WV 111

Query: 147 HRLKVAMEIANAVAYLH------VGFSRPIVFRDIKP--------FTTHVND-------- 184
              ++A  +   +AYLH        +   I  RD+           T  ++D        
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171

Query: 185 -------------NDKLIGTFGFIAPECI-------TTGNCNEKSDVYSFGALLLELLTG 224
                            +GT  ++APE +          +  ++ D+Y+ G +  E+   
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

Query: 225 KKG 227
              
Sbjct: 232 CTD 234

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 81.7 bits (202), Expect = 2e-18
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 46/173 (26%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI----LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           I     + H+NIL F+    +         LV ++   G+L D ++           ++ 
Sbjct: 87  IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEG 140

Query: 148 RLKVAMEIANAVAYLH-----VGFSRPIVFRDIKPFTTHVNDNDKL-------------- 188
            +K+A+  A+ +A+LH           I  RD+K     V  N                 
Sbjct: 141 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 200

Query: 189 -----------IGTFGFIAPECI------TTGNCNEKSDVYSFGALLLELLTG 224
                      +GT  ++APE +            +++D+Y+ G +  E+   
Sbjct: 201 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 80.9 bits (200), Expect = 3e-18
 Identities = 34/169 (20%), Positives = 58/169 (34%), Gaps = 46/169 (27%)

Query: 96  SQMSHKNILKFVGCCLETEVPI----LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
             M H+NIL F+   ++         L+ ++   G+L D +             K  LK+
Sbjct: 86  VLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST------TLDAKSMLKL 139

Query: 152 AMEIANAVAYLH-----VGFSRPIVFRDIKP---------------------FTTHVNDN 185
           A    + + +LH           I  RD+K                      F +  N+ 
Sbjct: 140 AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEV 199

Query: 186 DKL----IGTFGFIAPECI------TTGNCNEKSDVYSFGALLLELLTG 224
           D      +GT  ++ PE +              +D+YSFG +L E+   
Sbjct: 200 DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 77.7 bits (192), Expect = 3e-17
 Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 34/155 (21%)

Query: 95  ASQMSHKNILKF--VGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 152
           +SQ+SH+NI+    V    E +   LV E++   TL++ I   +G    P  +   +   
Sbjct: 65  SSQLSHQNIVSMIDVDE--EDDCYYLVMEYIEGPTLSEYIES-HG----PLSVDTAINFT 117

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP---------------F-------TTHVNDNDKLIG 190
            +I + + + H      IV RDIKP               F        T +   + ++G
Sbjct: 118 NQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG 174

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  + +PE       +E +D+YS G +L E+L G+
Sbjct: 175 TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 74.7 bits (184), Expect = 5e-16
 Identities = 41/156 (26%), Positives = 59/156 (37%), Gaps = 31/156 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
           S+ +H+NI++ +G  L++    ++ E +A G L    R   P  SQ     M   L VA 
Sbjct: 88  SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147

Query: 154 EIANAVAYLHVGFSRPIVFRDIK----PFTTHVNDNDKLIGTFGF--------------- 194
           +IA    YL        + RDI       T         IG FG                
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                  + PE    G    K+D +SFG LL E+ +
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 74.4 bits (183), Expect = 7e-16
 Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 31/153 (20%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQL-EPFLMKHRLKVAME 154
           + M H NI+++     E     +V ++   G L  RI+   G    E  +    L   ++
Sbjct: 78  ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI----LDWFVQ 133

Query: 155 IANAVAYLHVGFSRPIVFRDIKP---FTTHVNDNDKL-------------------IGTF 192
           I  A+ ++H    R I+ RDIK    F T  +   +L                   IGT 
Sbjct: 134 ICLALKHVH---DRKILHRDIKSQNIFLTK-DGTVQLGDFGIARVLNSTVELARACIGTP 189

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            +++PE       N KSD+++ G +L EL T K
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 73.4 bits (181), Expect = 9e-16
 Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 36/159 (22%)

Query: 95  ASQMSHKNILKF--VGCCLETEVPI--LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
           A+ ++H  I+     G       P+  +V E+V   TL D +H   G    P   K  ++
Sbjct: 66  AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EG----PMTPKRAIE 120

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKP---------------F---------TTHVNDND 186
           V  +   A+ + H      I+ RD+KP               F            V    
Sbjct: 121 VIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177

Query: 187 KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            +IGT  +++PE     + + +SDVYS G +L E+LTG+
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 72.8 bits (179), Expect = 2e-15
 Identities = 41/156 (26%), Positives = 59/156 (37%), Gaps = 31/156 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
           S+ +H+NI++ +G  L++    ++ E +A G L    R   P  SQ     M   L VA 
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188

Query: 154 EIANAVAYLHVGFSRPIVFRDIK----PFTTHVNDNDKLIGTFGF--------------- 194
           +IA    YL        + RDI       T         IG FG                
Sbjct: 189 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                  + PE    G    K+D +SFG LL E+ +
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 72.3 bits (178), Expect = 3e-15
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 29/153 (18%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            Q++H N++K+    +E     +V E    G L+  I      Q      +   K  +++
Sbjct: 87  KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH-FKKQKRLIPERTVWKYFVQL 145

Query: 156 ANAVAYLHVGFSRPIVFRDIKP---FTTHVNDNDKLIGTFGF------------------ 194
            +A+ ++H   SR ++ RDIKP   F T        +G  G                   
Sbjct: 146 CSALEHMH---SRRVMHRDIKPANVFIT--ATGVVKLGDLGLGRFFSSKTTAAHSLVGTP 200

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             ++PE I     N KSD++S G LL E+   +
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQ 233

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 72.3 bits (177), Expect = 4e-15
 Identities = 33/176 (18%), Positives = 55/176 (31%), Gaps = 37/176 (21%)

Query: 84  EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPF 143
           E Y     +           +KF    L     +LV E  + GTL + I+    +  +  
Sbjct: 110 EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVM 169

Query: 144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------FTTHVNDND-----KLI- 189
                +  AM +   +  +H      I+  DIKP        F    +++D      LI 
Sbjct: 170 PQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALID 226

Query: 190 --------------------GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                                T GF   E ++    N + D +   A +  +L G 
Sbjct: 227 LGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 71.3 bits (175), Expect = 6e-15
 Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 18/132 (13%)

Query: 95  ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
            S++    + + +         ++V E++  G+L +           P      ++    
Sbjct: 85  LSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS----PSP---VGAIRAMQS 137

Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFIAPECITTGNCNEKSDVYS 213
           +A A    H      +      P    V+ +  + +     +          N + D+  
Sbjct: 138 LAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMPDA-------NPQDDIRG 187

Query: 214 FGALLLELLTGK 225
            GA L  LL  +
Sbjct: 188 IGASLYALLVNR 199

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 70.8 bits (174), Expect = 9e-15
 Identities = 35/156 (22%), Positives = 66/156 (42%), Gaps = 31/156 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD-----RIHDPNGSQLEPFLMKHRLK 150
            + +  ++++ +G   + +  +++ E +  G L       R    N   L P  +   ++
Sbjct: 83  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF--------------- 194
           +A EIA+ +AYL+   +   V RD+      V ++  + IG FG                
Sbjct: 143 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 199

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                  ++PE +  G     SDV+SFG +L E+ T
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 70.4 bits (173), Expect = 1e-14
 Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 34/155 (21%)

Query: 95  ASQMSHKNILKF--VGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 152
           A ++   +++     G         +    +    LA  +       L P      + + 
Sbjct: 88  AGRLQEPHVVPIHDFGE--IDGQLYVDMRLINGVDLAAMLRR--QGPLAP---PRAVAIV 140

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP---------------F-------TTHVNDNDKLIG 190
            +I +A+   H   +     RD+KP               F          +      +G
Sbjct: 141 RQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVG 197

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE  +  +   ++D+Y+   +L E LTG 
Sbjct: 198 TLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 67.3 bits (165), Expect = 2e-13
 Identities = 27/155 (17%), Positives = 49/155 (31%), Gaps = 29/155 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
            +      H   ++      E  +  L  E     +L         S  E  +       
Sbjct: 108 GSHEKVGQHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQV----WGY 162

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK---LIGT 191
             +   A+A+LH   S+ +V  D+KP                     +          G 
Sbjct: 163 LRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGD 219

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
             ++APE +  G+    +DV+S G  +LE+    +
Sbjct: 220 PRYMAPE-LLQGSYGTAADVFSLGLTILEVACNME 253

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 66.9 bits (164), Expect = 2e-13
 Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 37/156 (23%)

Query: 96  SQMSHKNILKFVGCCLETEVPIL-VFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVA 152
              SH N+L  +G CL +E   L V  ++  G L +  R    N        +K  +   
Sbjct: 81  KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFG 134

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF----------------- 194
           +++A  + YL    S+  V RD+      +++   + +  FG                  
Sbjct: 135 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 191

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                  +A E + T     KSDV+SFG LL EL+T
Sbjct: 192 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 32/151 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q SH NI++ +G C + + PI +V E V  G     +    G++L    +K  L++  + 
Sbjct: 168 QYSHPNIVRLIGVCTQKQ-PIYIVMELVQGGDFLTFLRT-EGARLR---VKTLLQMVGDA 222

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---FI---------------- 195
           A  + YL    S+  + RD+      V + + L I  FG                     
Sbjct: 223 AAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV 279

Query: 196 ---APECITTGNCNEKSDVYSFGALLLELLT 223
              APE +  G  + +SDV+SFG LL E  +
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 66.5 bits (163), Expect = 2e-13
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 46/169 (27%)

Query: 96  SQMSHKNILKFVGCCLETEVPI----------------LVFEFVACGTLADRIHDPNGSQ 139
           +++ H NI+ + GC    +                   +  EF   GTL   I    G +
Sbjct: 59  AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118

Query: 140 L-EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---FTTHVNDNDKL------- 188
           L +       L++  +I   V Y+H   S+ ++ RD+KP   F        K+       
Sbjct: 119 LDKVLA----LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVD-TKQVKIGDFGLVT 170

Query: 189 -----------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                       GT  +++PE I++ +  ++ D+Y+ G +L ELL    
Sbjct: 171 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCD 219

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 66.8 bits (163), Expect = 2e-13
 Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 39/225 (17%)

Query: 35  KLIASCNGKYYPIRNFIALELEGATNNYDPGKGFLQDHPISEFGDNLNTEEYYCFNCIAF 94
           K +A        +R F A          +           +++  +  +        I  
Sbjct: 56  KALAKLEHPGI-VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRR 114

Query: 95  ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
               S KN +  +          +  +      L D ++     +         L + ++
Sbjct: 115 MDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH--GVCLHIFIQ 172

Query: 155 IANAVAYLHVGFSRPIVFRDIKP---------------F---TTHVNDNDK--------- 187
           IA AV +LH   S+ ++ RD+KP               F   T    D ++         
Sbjct: 173 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229

Query: 188 ------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                  +GT  +++PE I   N + K D++S G +L ELL    
Sbjct: 230 YATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS 274

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 41/171 (23%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVP----ILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
                  +H NIL+ V  CL          L+  F   GTL + I +    +        
Sbjct: 77  ADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI-ERLKDKGNFLTEDQ 135

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP------------------------------ 177
            L + + I   +  +H   ++    RD+KP                              
Sbjct: 136 ILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR 192

Query: 178 FTTHVNDNDKLIGTFGFIAPECITT---GNCNEKSDVYSFGALLLELLTGK 225
               + D      T  + APE  +       +E++DV+S G +L  ++ G+
Sbjct: 193 QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 56/182 (30%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-------------LVFEFVACGTLADRIHDPNGS 138
           +   + ++H+ ++++    LE    +             +  E+   GTL D IH  N +
Sbjct: 53  VMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLN 112

Query: 139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------------- 177
           Q          ++  +I  A++Y+H   S+ I+ RD+KP                     
Sbjct: 113 QQR----DEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKN 165

Query: 178 -----------FTTHVNDNDKL---IGTFGFIAPECIT-TGNCNEKSDVYSFGALLLELL 222
                             +D L   IGT  ++A E +  TG+ NEK D+YS G +  E++
Sbjct: 166 VHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

Query: 223 TG 224
             
Sbjct: 226 YP 227

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 66.6 bits (163), Expect = 4e-13
 Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 49/165 (29%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTL-----------ADRIHDPNGSQLEPFLMKH 147
            HKNI+  +G C +     ++ E+ + G L            +  +D N    E    K 
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH------VNDNDKL-IGTFGF------ 194
            +    ++A  + YL    S+  + RD+            V +N+ + I  FG       
Sbjct: 205 LVSCTYQLARGMEYLA---SQKCIHRDL------AARNVLVTENNVMKIADFGLARDINN 255

Query: 195 ----------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                           +APE +       +SDV+SFG L+ E+ T
Sbjct: 256 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 65.8 bits (161), Expect = 4e-13
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 41/171 (23%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
            A A    H +++++     E +  ++  E+   G+LAD I + N   +  F       +
Sbjct: 62  YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDL 120

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---FTTHVNDNDKL-----------------IGT 191
            +++   + Y+H   S  +V  DIKP   F +  +  +                   IG 
Sbjct: 121 LLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 177

Query: 192 FG----------------FIAPECIT-TGNCNEKSDVYSFGALLLELLTGK 225
            G                F+A E +        K+D+++    ++     +
Sbjct: 178 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 66.8 bits (163), Expect = 5e-13
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 35/153 (22%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
            + H  ++       +    ++++EF++ G L +++ D +    E      M+       
Sbjct: 210 VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR------- 262

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLI------------------GT 191
           ++   + ++H       V  D+KP    FTT  ++  KLI                  GT
Sbjct: 263 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             F APE          +D++S G L   LL+G
Sbjct: 320 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 65.4 bits (160), Expect = 5e-13
 Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 28/156 (17%)

Query: 96  SQMSHKNILKFVGCCLETEVPIL--VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 153
            ++ H NI+++    ++     L  V E+   G LA  I      + +    +  L+V  
Sbjct: 60  RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVLRVMT 118

Query: 154 EIANAVAYLH--VGFSRPIVFRDIKP---FTTHVNDNDKL-------------------I 189
           ++  A+   H        ++ RD+KP   F      N KL                   +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDTSFAKTFV 177

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           GT  +++PE +   + NEKSD++S G LL EL    
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 65.9 bits (161), Expect = 6e-13
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 37/156 (23%)

Query: 96  SQMSHKNILKFVGCCLETEVPIL-VFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVA 152
              SH N+L  +G CL +E   L V  ++  G L +  R    N        +K  +   
Sbjct: 145 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN------PTVKDLIGFG 198

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF----------------- 194
           +++A  + +L    S+  V RD+      +++   + +  FG                  
Sbjct: 199 LQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 255

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                  +A E + T     KSDV+SFG LL EL+T
Sbjct: 256 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 65.4 bits (160), Expect = 7e-13
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 35/159 (22%)

Query: 96  SQMSHKNILKFVGCCLETE------VPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKH 147
            +  H ++ K VG  L +       +P+++  F+  G L           +      ++ 
Sbjct: 80  KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP-FNLPLQT 138

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------ 194
            ++  ++IA  + YL    SR  + RD+      + ++  + +  FG             
Sbjct: 139 LVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195

Query: 195 ----------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                     +A E +        SDV++FG  + E++T
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 65.4 bits (160), Expect = 9e-13
 Identities = 36/165 (21%), Positives = 61/165 (36%), Gaps = 49/165 (29%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTL-----------ADRIHDPNGSQLEPFLMKH 147
            HKNI+  +G C +     ++ E+ + G L            +  +D N    E    K 
Sbjct: 99  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH------VNDNDKL-IGTFGF------ 194
            +    ++A  + YL    S+  + RD+            V +N+ + I  FG       
Sbjct: 159 LVSCTYQLARGMEYLA---SQKCIHRDL------AARNVLVTENNVMKIADFGLARDINN 209

Query: 195 ----------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                           +APE +       +SDV+SFG L+ E+ T
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 65.1 bits (159), Expect = 9e-13
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 50/173 (28%)

Query: 96  SQMSHKNILKFVGCCLETEVPI------------LVFEFVACGTLADRIHDPNGSQLEPF 143
           +++ H  I+++    LE                 +  +      L D ++     +    
Sbjct: 58  AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE- 116

Query: 144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP-------------------------- 177
                L + ++IA AV +LH   S+ ++ RD+KP                          
Sbjct: 117 -RSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172

Query: 178 -------FTTHVNDNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT 223
                         +   +GT  +++PE I   + + K D++S G +L ELL 
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 37/146 (25%), Positives = 66/146 (45%), Gaps = 25/146 (17%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L        LK ++++
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLKFSLDV 298

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-----------------IAP 197
             A+ YL        V RD+      V++++   +  FG                   AP
Sbjct: 299 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 355

Query: 198 ECITTGNCNEKSDVYSFGALLLELLT 223
           E +     + KSDV+SFG LL E+ +
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYS 381

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 40/157 (25%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 159
           H N++++     + +   +  E  A  TL + +   + + L        + +  +  + +
Sbjct: 77  HPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLG----LEPITLLQQTTSGL 131

Query: 160 AYLHVGFSRPIVFRDIKP----------------------FTTHVNDNDK-------LIG 190
           A+LH   S  IV RD+KP                          +            + G
Sbjct: 132 AHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188

Query: 191 TFGFIAPECI---TTGNCNEKSDVYSFGALLLELLTG 224
           T G+IAPE +      N     D++S G +   +++ 
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 65.6 bits (160), Expect = 1e-12
 Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 30/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H N+++ +G C     P  ++ EF+  G L D + + N  ++        L +A +I
Sbjct: 272 EIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYMATQI 327

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG--------------------- 193
           ++A+ YL     +  + R++      V +N  + +  FG                     
Sbjct: 328 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLT 223
           + APE +     + KSDV++FG LL E+ T
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 41/151 (27%), Positives = 61/151 (40%), Gaps = 32/151 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
            + H NI+K      + +   LV EF   G L ++I          F       +  +I 
Sbjct: 102 SLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----INRHKFDECDAANIMKQIL 156

Query: 157 NAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---IGTFG 193
           + + YLH      IV RDIKP                     ++  + + KL   +GT  
Sbjct: 157 SGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAY 213

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +IAPE +     NEK DV+S G ++  LL G
Sbjct: 214 YIAPEVLK-KKYNEKCDVWSCGVIMYILLCG 243

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 50/166 (30%)

Query: 99  SHKNILKFVGCCLETEVPI-LVFEFVACGTLAD--RIHDPNGSQL---------EPFLMK 146
            H N++  +G C +   P+ ++ EF   G L+   R                  +   ++
Sbjct: 89  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH------VNDNDKL-IGTFGF----- 194
           H +  + ++A  + +L    SR  + RD+            +++ + + I  FG      
Sbjct: 149 HLICYSFQVAKGMEFLA---SRKCIHRDL------AARNILLSEKNVVKICDFGLARDIY 199

Query: 195 -----------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                            +APE I       +SDV+SFG LL E+ +
Sbjct: 200 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 34/159 (21%), Positives = 54/159 (33%), Gaps = 36/159 (22%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKH 147
           +    Q+ H +IL+      E    + LV E    G +   + +      E      M  
Sbjct: 62  VKIHCQLKHPSILELYNY-FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH- 119

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLI- 189
                 +I   + YLH   S  I+ RD+                     T +    +   
Sbjct: 120 ------QIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY 170

Query: 190 ---GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
              GT  +I+PE  T      +SDV+S G +   LL G+
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGR 209

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 65.5 bits (159), Expect = 1e-12
 Identities = 32/160 (20%), Positives = 61/160 (38%), Gaps = 38/160 (23%)

Query: 97  QMSHKNILKFVGCCLETE-------VPILVFEFVACGTLADRIHDP-NGSQLEPFLMKHR 148
           +++H N++       +         +P+L  E+   G L   ++   N   L+       
Sbjct: 68  KLNHPNVVSAR-EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE---GPI 123

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL 188
             +  +I++A+ YLH      I+ RD+KP                    +   ++  +  
Sbjct: 124 RTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC 180

Query: 189 ---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
              +GT  ++APE +         D +SFG L  E +TG 
Sbjct: 181 TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF 220

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 32/151 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q+ H NI+K      +     LV E    G L D I        + F      ++  ++ 
Sbjct: 82  QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI-----ISRKRFSEVDAARIIRQVL 136

Query: 157 NAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---IGTFG 193
           + + Y+H      IV RD+KP                     +TH   + K+   IGT  
Sbjct: 137 SGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAY 193

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 194 YIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 32/152 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
            + H NI+K      +     LV E    G L D I          F       +  ++ 
Sbjct: 92  LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI-----IHRMKFNEVDAAVIIKQVL 146

Query: 157 NAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---IGTFG 193
           + V YLH      IV RD+KP                     +    +  K+   +GT  
Sbjct: 147 SGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAY 203

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           +IAPE +     +EK DV+S G +L  LL G 
Sbjct: 204 YIAPEVLR-KKYDEKCDVWSIGVILFILLAGY 234

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 64.6 bits (158), Expect = 1e-12
 Identities = 41/167 (24%), Positives = 62/167 (37%), Gaps = 48/167 (28%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDP--------NGSQLEPFLM 145
           + + H++I++F G C E    ++VFE++  G L    R H P              P  +
Sbjct: 98  TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH------VNDNDKL-IGTFGF---- 194
              L VA ++A  + YL        V RD+            V     + IG FG     
Sbjct: 158 GQLLAVASQVAAGMVYLA---GLHFVHRDL------ATRNCLVGQGLVVKIGDFGMSRDI 208

Query: 195 ------------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                             + PE I       +SDV+SFG +L E+ T
Sbjct: 209 YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 34/158 (21%)

Query: 96  SQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHR 148
              SH N+++ +G C+E        P+++  F+  G L              +   ++  
Sbjct: 91  KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGP-KHIPLQTL 149

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------- 194
           LK  ++IA  + YL    +R  + RD+      + D+  + +  FG              
Sbjct: 150 LKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206

Query: 195 ---------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                    IA E +       KSDV++FG  + E+ T
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 64.4 bits (157), Expect = 2e-12
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 35/161 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +   + +S   I+   G   E     +  E +  G+L   I    G   E   +      
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-KQMGCLPEDRALY----Y 155

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------------------FTTHVND 184
             +    + YLH   +R I+  D+K                                +  
Sbjct: 156 LGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212

Query: 185 NDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            D + GT   +APE +    C+ K D++S   ++L +L G 
Sbjct: 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGC 253

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 63.9 bits (156), Expect = 2e-12
 Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 33/160 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS--QLEPFLMKHRL 149
           IA    + HKNI++++G   E     +  E V  G+L+  +    G     E  +     
Sbjct: 70  IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG---- 125

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP----------------------FTTHVNDNDK 187
               +I   + YLH      IV RDIK                               + 
Sbjct: 126 FYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182

Query: 188 LIGTFGFIAPECITTGN--CNEKSDVYSFGALLLELLTGK 225
             GT  ++APE I  G     + +D++S G  ++E+ TGK
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 63.6 bits (155), Expect = 3e-12
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 39/163 (23%)

Query: 97  QMSHKNILKFVGC--CLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +++HKNI+K         T   +L+ EF  CG+L   + +P  S          L V  +
Sbjct: 63  KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRD 120

Query: 155 IANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDNDKL---IG 190
           +   + +L       IV R+IKP                         + D+++     G
Sbjct: 121 VVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYG 177

Query: 191 TFGFIAPECITTGNC--------NEKSDVYSFGALLLELLTGK 225
           T  ++ P+                   D++S G       TG 
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 34/152 (22%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H NI+K      E      +V E    G L D I      + + F      ++  ++
Sbjct: 77  KLDHPNIMKLFEIL-EDSSSFYIVGELYTGGELFDEI-----IKRKRFSEHDAARIIKQV 130

Query: 156 ANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---IGTF 192
            + + Y+H      IV RD+KP                     +T    N K+   IGT 
Sbjct: 131 FSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 188 YYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 63.0 bits (154), Expect = 5e-12
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 37/162 (22%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFL 144
           + + H++I+KF G C + +  I+VFE++  G L    R H P+   L             
Sbjct: 72  TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131

Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF--------- 194
           +   L +A +IA+ + YL    S+  V RD+      V  N  + IG FG          
Sbjct: 132 LSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY 188

Query: 195 -------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                        + PE I       +SDV+SFG +L E+ T
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 62.6 bits (153), Expect = 5e-12
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 29/154 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
           +   S + H NIL+  G        + L+ E+   GT+   +      +L  F  +    
Sbjct: 60  VEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYREL-----QKLSKFDEQRTAT 113

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDN--DKLIGT 191
              E+ANA++Y H   S+ ++ RDIKP                 ++ H   +    L GT
Sbjct: 114 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGT 170

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             ++ PE I     +EK D++S G L  E L GK
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 63.3 bits (154), Expect = 5e-12
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 39/163 (23%)

Query: 97  QMSHKNILKFVGC--CLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           +++HKNI+K         T   +L+ EF  CG+L   + +P  S          L V  +
Sbjct: 63  KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRD 120

Query: 155 IANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDNDKL---IG 190
           +   + +L       IV R+IKP                         + D+++     G
Sbjct: 121 VVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYG 177

Query: 191 TFGFIAPECITTGNC--------NEKSDVYSFGALLLELLTGK 225
           T  ++ P+                   D++S G       TG 
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGS 220

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 62.6 bits (153), Expect = 5e-12
 Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 25/146 (17%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L    +   LK ++++
Sbjct: 70  QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLDV 126

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-----------------IAP 197
             A+ YL        V RD+      V++++   +  FG                   AP
Sbjct: 127 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 183

Query: 198 ECITTGNCNEKSDVYSFGALLLELLT 223
           E +     + KSDV+SFG LL E+ +
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYS 209

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 62.8 bits (153), Expect = 7e-12
 Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 37/159 (23%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTL-----------ADRIHDPNGSQLEPFLMKH 147
            HKNI+  +G C +     ++ E+ + G L            +  ++P+ +  E    K 
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------ 194
            +  A ++A  + YL    S+  + RD+      V +++ + I  FG             
Sbjct: 193 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249

Query: 195 ----------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                     +APE +       +SDV+SFG LL E+ T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 62.4 bits (152), Expect = 9e-12
 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 47/160 (29%)

Query: 96  SQMSHKNILKFVGCCLET-EVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV-- 151
             + H++I+K+ GCC +     + LV E+V  G+L D            +L +H + +  
Sbjct: 88  RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD------------YLPRHSIGLAQ 135

Query: 152 ----AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------ 194
               A +I   +AYLH   ++  + RD+      ++++  + IG FG             
Sbjct: 136 LLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 192

Query: 195 -----------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                       APEC+        SDV+SFG  L ELLT
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 37/159 (23%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKH 147
           I+    ++H++++ F G   E    + +V E     +L +       +  EP   + ++ 
Sbjct: 92  ISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEARYYLR- 148

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------ 194
                 +I     YLH      ++ RD+K     +N++ ++ IG FG             
Sbjct: 149 ------QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 199

Query: 195 --------IAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                   IAPE ++    + + DV+S G ++  LL GK
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 62.6 bits (152), Expect = 1e-11
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 31/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H+ +++       +E PI +V E+++ G+L D +    G  L    +   + +A +I
Sbjct: 318 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL---VDMAAQI 372

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A+ +AY+        V RD++     V +N    +  FG                     
Sbjct: 373 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 429

Query: 195 -IAPECITTGNCNEKSDVYSFGALLLELLT 223
             APE    G    KSDV+SFG LL EL T
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTT 459

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 32/156 (20%), Positives = 62/156 (39%), Gaps = 37/156 (23%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
           S++SHK+++   G C+  +  ILV EFV  G+L    + +           +  +L+VA 
Sbjct: 67  SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKN------CINILWKLEVAK 120

Query: 154 EIANAVAYLHVGFSRPIVFRDI--------KPFTTHVNDNDKL-IGTFGF---------- 194
           ++A A+ +L       ++  ++        +       +   + +   G           
Sbjct: 121 QLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL 177

Query: 195 ------IAPECITTGNC-NEKSDVYSFGALLLELLT 223
                 + PECI      N  +D +SFG  L E+ +
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 61.8 bits (151), Expect = 1e-11
 Identities = 34/159 (21%), Positives = 66/159 (41%), Gaps = 37/159 (23%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKH 147
           I+    ++H++++ F G   E    + +V E     +L +       +  EP   + ++ 
Sbjct: 66  ISIHRSLAHQHVVGFHGF-FEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEARYYLR- 122

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------- 193
                 +I     YLH      ++ RD+K     +N++ ++ IG FG             
Sbjct: 123 ------QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK 173

Query: 194 -------FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                  +IAPE ++    + + DV+S G ++  LL GK
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 61.5 bits (150), Expect = 1e-11
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 31/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPIL-VFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           Q+ H+ +++       T+ PI  + E++  G+L D +  P+G +L    +   L +A +I
Sbjct: 64  QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLT---INKLLDMAAQI 118

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A  +A++     R  + RD++     V+D     I  FG                     
Sbjct: 119 AEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK 175

Query: 195 -IAPECITTGNCNEKSDVYSFGALLLELLT 223
             APE I  G    KSDV+SFG LL E++T
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 57/176 (32%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDP-----------------N 136
           ++  + NI+K +G C   +   L+FE++A G L +  R   P                 +
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164

Query: 137 GSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH------VNDNDKL-I 189
                P     +L +A ++A  +AYL     R  V RD+            V +N  + I
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL------ATRNCLVGENMVVKI 215

Query: 190 GTFGF----------------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
             FG                       + PE I       +SDV+++G +L E+ +
Sbjct: 216 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 31/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H+ +++       +E PI +V E+++ G+L D +    G  L    +   + +A +I
Sbjct: 235 KLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL---VDMAAQI 289

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A+ +AY+        V RD++     V +N    +  FG                     
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346

Query: 195 -IAPECITTGNCNEKSDVYSFGALLLELLT 223
             APE    G    KSDV+SFG LL EL T
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 33/155 (21%), Positives = 52/155 (33%), Gaps = 34/155 (21%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFLMKHR 148
           H NI+  +G C       L  E+   G L D  R      +                +  
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------- 194
           L  A ++A  + YL     +  + RD+      V +N    I  FG              
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201

Query: 195 ------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                 +A E +        SDV+S+G LL E+++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 35/156 (22%), Positives = 58/156 (37%), Gaps = 37/156 (23%)

Query: 96  SQMSHKNILKFVGCCLETEVPIL-VFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVA 152
             ++H N+L  +G  L  E     +  ++  G L    R    N        +K  +   
Sbjct: 77  RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN------PTVKDLISFG 130

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF----------------- 194
           +++A  + YL     +  V RD+      ++++  + +  FG                  
Sbjct: 131 LQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRH 187

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                   A E + T     KSDV+SFG LL ELLT
Sbjct: 188 ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 61.1 bits (149), Expect = 2e-11
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 49/168 (29%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL---------EPFL 144
           +++ H N++  +G   + +   ++F + + G L +   +  P+                 
Sbjct: 67  ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126

Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH------VNDNDKL-IGTFGF--- 194
               + +  +IA  + YL    S  +V +D+            V D   + I   G    
Sbjct: 127 PPDFVHLVAQIAAGMEYLS---SHHVVHKDL------ATRNVLVYDKLNVKISDLGLFRE 177

Query: 195 -------------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                              +APE I  G  +  SD++S+G +L E+ +
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 37/156 (23%)

Query: 96  SQMSHKNILKFVGCCLET-EVPI-LVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKV 151
             + H NI+K+ G C       + L+ E++  G+L D  + H               L+ 
Sbjct: 97  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------IDHIKLLQY 150

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF---------------- 194
             +I   + YL    ++  + RD+      V + +++ IG FG                 
Sbjct: 151 TSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEP 207

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                   APE +T    +  SDV+SFG +L EL T
Sbjct: 208 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 61.6 bits (150), Expect = 2e-11
 Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 31/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            + H  ++K       T+ PI ++ EF+A G+L D +    GS+         +  + +I
Sbjct: 239 TLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPL---PKLIDFSAQI 293

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A  +A++     R  + RD++     V+ +    I  FG                     
Sbjct: 294 AEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK 350

Query: 195 -IAPECITTGNCNEKSDVYSFGALLLELLT 223
             APE I  G+   KSDV+SFG LL+E++T
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 36/155 (23%), Positives = 54/155 (34%), Gaps = 37/155 (23%)

Query: 97  QMSHKNILKFVGCCLET-EVPI-LVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVA 152
            +    I+K+ G         + LV E++  G L D  + H               L  +
Sbjct: 80  ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------LDASRLLLYS 133

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF----------------- 194
            +I   + YL    SR  V RD+      V     + I  FG                  
Sbjct: 134 SQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPG 190

Query: 195 ------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                  APE ++    + +SDV+SFG +L EL T
Sbjct: 191 QSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 61.2 bits (148), Expect = 3e-11
 Identities = 18/160 (11%), Positives = 43/160 (26%), Gaps = 36/160 (22%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVAC----GTLADRIHDPNGSQLEPFLMKHRLKVAM 153
              K +++      +  V    F +        T  + +   + S  +  +   RL++ +
Sbjct: 155 PQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS-HSSTHKSLVHHARLQLTL 213

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLIGTFGFIA 196
           ++   +A LH      +V   ++P                              + GF  
Sbjct: 214 QVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEP 270

Query: 197 PECITTGNC-----------NEKSDVYSFGALLLELLTGK 225
           PE                      D ++ G ++  +    
Sbjct: 271 PELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 22/159 (13%), Positives = 57/159 (35%), Gaps = 28/159 (17%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDP---NGSQLEPFLMKH 147
           +   + + ++  L   G  +     + +++E++   ++          + +      ++ 
Sbjct: 94  LQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDN--DKL 188
              +   + N+ +Y+H    + I  RD+KP                  + ++ D      
Sbjct: 153 IKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS 210

Query: 189 IGTFGFIAPECITTGNC--NEKSDVYSFGALLLELLTGK 225
            GT+ F+ PE  +  +     K D++S G  L  +    
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 60.7 bits (148), Expect = 3e-11
 Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 39/161 (24%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQL-----------EPFLM 145
           +H NI+  +G C      +++ E+   G L +  R    +                   +
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF---------- 194
           +  L  + ++A  +A+L    S+  + RD+      +       I  FG           
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 195 ------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                       +APE I       +SDV+S+G  L EL +
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 61.2 bits (148), Expect = 3e-11
 Identities = 16/137 (11%), Positives = 39/137 (28%), Gaps = 33/137 (24%)

Query: 118 LVFEFVAC--GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDI 175
            ++  +     T  + +   + S  +  +   RL++ +++   +A LH      +V   +
Sbjct: 182 FLYPRMQSNLQTFGEVLLS-HSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYL 237

Query: 176 KP---------------FTTHVNDNDKLIGTFG-------FIAPECIT-----TGNCNEK 208
           +P               F   V D    +   G         A   +             
Sbjct: 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297

Query: 209 SDVYSFGALLLELLTGK 225
            D ++ G  +  +    
Sbjct: 298 FDTWTLGLAIYWIWCAD 314

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 60.9 bits (148), Expect = 4e-11
 Identities = 33/153 (21%), Positives = 55/153 (35%), Gaps = 35/153 (22%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
           Q+ H  ++       +    +L+ EF++ G L DRI   +    E      M+       
Sbjct: 104 QLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR------- 156

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLI------------------GT 191
           +    + ++H      IV  DIKP      T    + K+I                   T
Sbjct: 157 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             F APE +        +D+++ G L   LL+G
Sbjct: 214 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 60.4 bits (147), Expect = 4e-11
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 37/156 (23%)

Query: 96  SQMSHKNILKFVGCCLET-EVPI-LVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKV 151
             + H NI+K+ G C       + L+ E++  G+L D  + H               L+ 
Sbjct: 66  KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER------IDHIKLLQY 119

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF---------------- 194
             +I   + YL    ++  + RD+      V + +++ IG FG                 
Sbjct: 120 TSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEP 176

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                   APE +T    +  SDV+SFG +L EL T
Sbjct: 177 GESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 60.3 bits (147), Expect = 4e-11
 Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 30/152 (19%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            + H NI+K      E    + +V E    G L +RI     ++ +     +  ++  ++
Sbjct: 76  SLDHPNIIKIFEVF-EDYHNMYIVMETCEGGELLERIVS-AQARGKALSEGYVAELMKQM 133

Query: 156 ANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND-KLI------------------GTF 192
            NA+AY H   S+ +V +D+KP    F      +  K+I                  GT 
Sbjct: 134 MNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTA 190

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            ++APE +   +   K D++S G ++  LLTG
Sbjct: 191 LYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTG 221

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 60.8 bits (147), Expect = 4e-11
 Identities = 9/130 (6%), Positives = 27/130 (20%), Gaps = 26/130 (20%)

Query: 118 LVFEFVAC--GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDI 175
           L+    +     L   +      +     +     +  ++    A L    S+ +V    
Sbjct: 165 LLMPAASVDLELLFSTLDFVYVFR-GDEGILALHILTAQLIRLAANLQ---SKGLVHGHF 220

Query: 176 KP---------------FTTHVNDNDK---LIGTFGFIAPECITTGNC--NEKSDVYSFG 215
            P                +       +         +   E +           + +  G
Sbjct: 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLG 280

Query: 216 ALLLELLTGK 225
             +  +    
Sbjct: 281 LSIYRVWCLF 290

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 60.0 bits (146), Expect = 5e-11
 Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 37/156 (23%)

Query: 96  SQMSHKNILKFVGCCLETEV-PI-LVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKV 151
             + H+NI+K+ G C E     I L+ EF+  G+L +    +           +K +LK 
Sbjct: 78  RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK------INLKQQLKY 131

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF---------------- 194
           A++I   + YL    SR  V RD+      V    ++ IG FG                 
Sbjct: 132 AVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDD 188

Query: 195 -------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                   APEC+        SDV+SFG  L ELLT
Sbjct: 189 RDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 59.9 bits (146), Expect = 5e-11
 Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 34/155 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            + + ++ + +G CL +   + L+ + +  G L D + +   +       ++ L   ++I
Sbjct: 73  SVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQI 126

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A  + YL     R +V RD+      V     + I  FG                     
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
             +A E I       +SDV+S+G  + EL+T G K
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 59.5 bits (145), Expect = 7e-11
 Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 40/155 (25%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVA 152
            + H NI++      E    I LV E    G L +R+        E     +MK      
Sbjct: 62  SLDHPNIIRLYETF-EDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKD----- 114

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---I 189
             + +AVAY H      +  RD+KP                              +   +
Sbjct: 115 --VLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV 169

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT  +++P+ +  G    + D +S G ++  LL G
Sbjct: 170 GTPYYVSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 59.6 bits (145), Expect = 7e-11
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 35/157 (22%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDP-------NGSQLEPFLMKHRL 149
            H+NI+  +G C      +++ E+   G L +  R                     +  L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------- 194
             + ++A  +A+L    S+  + RD+      + +     IG FG               
Sbjct: 168 HFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224

Query: 195 --------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                   +APE I       +SDV+S+G LL E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 59.6 bits (145), Expect = 8e-11
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 44/160 (27%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPF-------LMKHR 148
            + H +I++ +     ++  + +VFEF+    L   I          +        M+  
Sbjct: 82  MLKHPHIVELLETY-SSDGMLYMVFEFMDGADLCFEIVK-RADAGFVYSEAVASHYMRQ- 138

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND-KLI-------------- 189
                 I  A+ Y H      I+ RD+KP      +  N    KL               
Sbjct: 139 ------ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV 189

Query: 190 -----GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
                GT  F+APE +      +  DV+  G +L  LL+G
Sbjct: 190 AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 59.1 bits (144), Expect = 9e-11
 Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 38/159 (23%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKH 147
           IA   ++ H+NI+       E+     LV + V+ G L DRI +  G   E     +++ 
Sbjct: 57  IAVLKKIKHENIVTLEDIY-ESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQQ 114

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND-KLI------------- 189
                  + +AV YLH      IV RD+KP    + T   ++   +              
Sbjct: 115 -------VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164

Query: 190 ----GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
               GT G++APE +     ++  D +S G +   LL G
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 59.1 bits (144), Expect = 9e-11
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 29/150 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
           S + H NIL+           I L+ EF   G L   +      +   F  +       E
Sbjct: 69  SHLRHPNILRMYNY-FHDRKRIYLMLEFAPRGELYKEL-----QKHGRFDEQRSATFMEE 122

Query: 155 IANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDN--DKLIGTFGFI 195
           +A+A+ Y H    R ++ RDIKP                 ++ H        + GT  ++
Sbjct: 123 LADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYL 179

Query: 196 APECITTGNCNEKSDVYSFGALLLELLTGK 225
            PE I     +EK D++  G L  E L G 
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 59.7 bits (145), Expect = 9e-11
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 35/153 (22%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
           Q+ H N+++           +LV E+V  G L DRI D + +  E      MK       
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK------- 194

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLI------------------GT 191
           +I   + ++H      I+  D+KP             K+I                  GT
Sbjct: 195 QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGT 251

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             F+APE +     +  +D++S G +   LL+G
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 57/176 (32%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFL--------- 144
            Q++H +++K  G C +    +L+ E+   G+L    R     G                
Sbjct: 81  KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140

Query: 145 --------MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTH------VNDNDKL-I 189
                   M   +  A +I+  + YL       +V RD+            V +  K+ I
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDL------AARNILVAEGRKMKI 191

Query: 190 GTFGF----------------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
             FG                       +A E +       +SDV+SFG LL E++T
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 42/155 (27%), Positives = 61/155 (39%), Gaps = 40/155 (25%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVA 152
           ++ H NI+K      E      +V E    G L D I        E     ++K      
Sbjct: 77  KLDHPNIMKLFEIL-EDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQ----- 129

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---I 189
             + + + Y+H      IV RD+KP                     +T    N K+   I
Sbjct: 130 --VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI 184

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT  +IAPE +  G  +EK DV+S G +L  LL+G
Sbjct: 185 GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 58.5 bits (142), Expect = 2e-10
 Identities = 46/155 (29%), Positives = 60/155 (38%), Gaps = 39/155 (25%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVA 152
           ++SH NI+K      ET   I LV E V  G L DRI +  G   E      +K      
Sbjct: 104 RLSHPNIIKLKEIF-ETPTEISLVLELVTGGELFDRIVE-KGYYSERDAADAVKQ----- 156

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---I 189
             I  AVAYLH      IV RD+KP                     +  V     +    
Sbjct: 157 --ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC 211

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT G+ APE +       + D++S G +   LL G
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.0 bits (141), Expect = 2e-10
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 30/150 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
           ++ H N+++ +G C     P  ++ EF+  G L D + + N  ++        L +A +I
Sbjct: 65  EIKHPNLVQLLGVCTREP-PFYIITEFMTYGNLLDYLRECNRQEVS---AVVLLYMATQI 120

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           ++A+ YL     +  + RD+      V +N  + +  FG                     
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177

Query: 195 -IAPECITTGNCNEKSDVYSFGALLLELLT 223
             APE +     + KSDV++FG LL E+ T
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 28/154 (18%)

Query: 92  IAFASQMSHKNILKFVGCCL-ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
           +    + +   I+ F G    + E+ I   E +  G+L D++    G   E  L K    
Sbjct: 82  LQVLHECNSPYIVGFYGAFYSDGEISI-CMEHMDGGSL-DQVLKKAGRIPEQILGK---- 135

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KL-----------------IGT 191
           V++ +   + YL       I+ RD+KP    VN     KL                 +GT
Sbjct: 136 VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 193

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             +++PE +   + + +SD++S G  L+E+  G+
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 58.3 bits (141), Expect = 3e-10
 Identities = 33/173 (19%), Positives = 60/173 (34%), Gaps = 53/173 (30%)

Query: 100 HKNILKFVGCCLETEVPI-LVFEFVACGTLADRI--HDPNGSQLEPFLMKHRLKVAMEIA 156
           H N++++  C   T+  + +  E      L D +   + +   L+     + + +  +IA
Sbjct: 68  HPNVIRYY-CSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125

Query: 157 NAVAYLHVGFSRPIVFRDIKP---------------FTTHVNDNDKLI------------ 189
           + VA+LH   S  I+ RD+KP                T   N    +             
Sbjct: 126 SGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182

Query: 190 -----------GTFGFIAPECI-------TTGNCNEKSDVYSFGALLLELLTG 224
                      GT G+ APE +       T        D++S G +   +L+ 
Sbjct: 183 SSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 42/159 (26%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 159
              I++     +  +   +V E      L   +     S        +       +  AV
Sbjct: 87  SDKIIRLYDYEITDQYIYMVMECGN-IDLNSWLKK-KKSIDPWERKSY----WKNMLEAV 140

Query: 160 AYLHVGFSRPIVFRDIKP----------------FTTHVNDNDK------LIGTFGFIAP 197
             +H      IV  D+KP                    +  +         +GT  ++ P
Sbjct: 141 HTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197

Query: 198 ECITTGN-----------CNEKSDVYSFGALLLELLTGK 225
           E I   +            + KSDV+S G +L  +  GK
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 57.6 bits (140), Expect = 4e-10
 Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 35/153 (22%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
              H+NIL         E  +++FEF++   + +RI+       E      +        
Sbjct: 57  IARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH------- 109

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLI------------------GT 191
           ++  A+ +LH   S  I   DI+P    + T  +   K+I                    
Sbjct: 110 QVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTA 166

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             + APE       +  +D++S G L+  LL+G
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 33/151 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            + H +I++ +G C      + LV +++  G+L D +    G+       +  L   ++I
Sbjct: 71  SLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGA----LGPQLLLNWGVQI 124

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A  + YL       +V R++      +    ++ +  FG                     
Sbjct: 125 AKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLT 223
             +A E I  G    +SDV+S+G  + EL+T
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 36/166 (21%), Positives = 58/166 (34%), Gaps = 44/166 (26%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTL------------------ADRIHDPNGSQL 140
           SH+NI+  +G C  +    L+FE+   G L                   ++        L
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 141 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF----- 194
                +  L  A ++A  + +L     +  V RD+      V     + I  FG      
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223

Query: 195 -----------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                            +APE +  G    KSDV+S+G LL E+ +
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 57.2 bits (139), Expect = 4e-10
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 39/155 (25%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVA 152
           ++ H NI++      + E    LVF+ V  G L + I        E      ++      
Sbjct: 61  KLQHPNIVRLHDSI-QEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQ----- 113

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---I 189
             I  ++AY H   S  IV R++KP                        VND++      
Sbjct: 114 --ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 168

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT G+++PE +     ++  D+++ G +L  LL G
Sbjct: 169 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 57.3 bits (139), Expect = 5e-10
 Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 26/138 (18%)

Query: 100 HKNILKFVGCCLETEVPI-----LVFEFVACGTLADRIHDPNGSQL-EP---FLMKHRLK 150
             +I++ V    E          +V E +  G L  RI D       E     +MK    
Sbjct: 70  CPHIVRIVDVY-ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS--- 125

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLIGTFGFIAPECITTGNCN 206
               I  A+ YLH   S  I  RD+KP    +T+   +    +  FGF A E  T    +
Sbjct: 126 ----IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKE-TTGEKYD 176

Query: 207 EKSDVYSFGALLLELLTG 224
           +  D++S G ++  LL G
Sbjct: 177 KSCDMWSLGVIMYILLCG 194

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 57.3 bits (139), Expect = 6e-10
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 39/155 (25%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVA 152
           ++ H NI++      + E    LVF+ V  G L + I        E      ++      
Sbjct: 84  KLQHPNIVRLHDSI-QEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQ----- 136

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---I 189
             I  ++AY H   S  IV R++KP                        VND++      
Sbjct: 137 --ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA 191

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT G+++PE +     ++  D+++ G +L  LL G
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 56.8 bits (138), Expect = 7e-10
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 38/155 (24%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
           ++ H NI+            +L+ E V+ G L D + +   S  E      +K       
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQ------ 116

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND--KLI------------------ 189
            I + V YLH   S+ I   D+KP           N   KLI                  
Sbjct: 117 -ILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 172

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT  F+APE +       ++D++S G +   LL+G
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 56.6 bits (137), Expect = 8e-10
 Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 33/151 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            + + ++ + +G CL +   + L+ + +  G L D + +   +       ++ L   ++I
Sbjct: 73  SVDNPHVCRLLGICLTS--TVQLITQLMPFGCLLDYVREHKDN----IGSQYLLNWCVQI 126

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A  + YL     R +V RD+      V     + I  FG                     
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLT 223
             +A E I       +SDV+S+G  + EL+T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 44/194 (22%), Positives = 62/194 (31%), Gaps = 69/194 (35%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME- 154
           ++ H NI +      E E  I LV E    G L D+++           M          
Sbjct: 84  KLHHPNIARLYEV-YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142

Query: 155 ----------------------------------IANAVAYLHVGFSRPIVFRDIKP--- 177
                                             I +A+ YLH   ++ I  RDIKP   
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENF 199

Query: 178 -FTTHVNDNDKLI-----------------------GTFGFIAPECITTG--NCNEKSDV 211
            F+T+ +   KL+                       GT  F+APE + T   +   K D 
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259

Query: 212 YSFGALLLELLTGK 225
           +S G LL  LL G 
Sbjct: 260 WSAGVLLHLLLMGA 273

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 35/156 (22%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            + H+N+++  G  L    P+ +V E    G+L DR+    G     FL+    + A+++
Sbjct: 77  SLDHRNLIRLYGVVLTP--PMKMVTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQV 130

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF-------------------- 194
           A  + YL    S+  + RD+      +   D + IG FG                     
Sbjct: 131 AEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187

Query: 195 ---IAPECITTGNCNEKSDVYSFGALLLELLT-GKK 226
               APE + T   +  SD + FG  L E+ T G++
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 40/156 (25%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVA 152
            + H NI++        E    L+F+ V  G L + I        E      ++      
Sbjct: 66  LLKHPNIVRLHDSI-SEEGHHYLIFDLVTGGELFEDIVA-REYYSEADASHCIQQ----- 118

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND-KLI------------------ 189
             I  AV + H      +V R++KP      + +     KL                   
Sbjct: 119 --ILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF 173

Query: 190 -GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            GT G+++PE +      +  D+++ G +L  LL G
Sbjct: 174 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 31/151 (20%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
            ++SH  +++  G CLE   PI LV EF+  G L+D +    G     F  +  L + ++
Sbjct: 58  MKLSHPKLVQLYGVCLEQA-PICLVTEFMEHGCLSDYLRTQRGL----FAAETLLGMCLD 112

Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------------- 194
           +   +AYL       ++ RD+      V +N  + +  FG                    
Sbjct: 113 VCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 169

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLT 223
              +PE  +    + KSDV+SFG L+ E+ +
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 40/156 (25%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVA 152
           ++ H N++       E +  + L+ E VA G L D + +   S  E      +K      
Sbjct: 70  EIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLK------ 121

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND--KLI----------------- 189
            +I N V YLH   S  I   D+KP               K+I                 
Sbjct: 122 -QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177

Query: 190 -GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            GT  F+APE +       ++D++S G +   LL+G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 36/153 (23%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVA 152
            Q  H +I+K +G    TE P+ ++ E    G L    ++            +   +  A
Sbjct: 446 RQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYA 497

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF----------------- 194
            +++ A+AYL    S+  V RDI      V+ ND + +G FG                  
Sbjct: 498 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 554

Query: 195 ----IAPECITTGNCNEKSDVYSFGALLLELLT 223
               +APE I        SDV+ FG  + E+L 
Sbjct: 555 PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 28/169 (16%), Positives = 53/169 (31%), Gaps = 44/169 (26%)

Query: 92  IAFASQMSHKN--ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           IA+ +++   +  I++     +  +   +V E      L   +     S        +  
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWLKK-KKSIDPWERKSY-- 160

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP----------------FTTHVNDNDK------ 187
                +  AV  +H      IV  D+KP                    +  +        
Sbjct: 161 --WKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 215

Query: 188 LIGTFGFIAPECITTGN-----------CNEKSDVYSFGALLLELLTGK 225
            +G   ++ PE I   +            + KSDV+S G +L  +  GK
Sbjct: 216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 55.9 bits (135), Expect = 1e-09
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 44/169 (26%)

Query: 92  IAFASQMSHKN--ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           IA+ +++   +  I++     +  +   +V E      L   +     S        +  
Sbjct: 58  IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWLKK-KKSIDPWERKSY-- 113

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKP----------------FTTHVNDNDK------ 187
                +  AV  +H      IV  D+KP                    +  +        
Sbjct: 114 --WKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 168

Query: 188 LIGTFGFIAPECI-----------TTGNCNEKSDVYSFGALLLELLTGK 225
            +GT  ++ PE I           +    + KSDV+S G +L  +  GK
Sbjct: 169 QVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 55.7 bits (135), Expect = 2e-09
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 38/155 (24%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
           Q+ H N++            +L+ E V+ G L D +     S  E      +K       
Sbjct: 71  QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIK------- 122

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND--KLI------------------ 189
           +I + V YLH   ++ I   D+KP               KLI                  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT  F+APE +       ++D++S G +   LL+G
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 35/153 (22%)

Query: 100 HKNILKFVGCCLETEVPI-----LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
             +I++ V    E          +V E +  G L  RI D      + F  +   ++   
Sbjct: 114 CPHIVRIVDVY-ENLYAGRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKS 169

Query: 155 IANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---IGT 191
           I  A+ YLH   S  I  RD+KP                    F      ++ L     T
Sbjct: 170 IGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             ++APE +     ++  D++S G ++  LL G
Sbjct: 227 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 41/157 (26%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
           +++H  I+K      + E   +V E +  G L D++   N    E               
Sbjct: 196 KLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQ------ 247

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---IG 190
            +  AV YLH      I+ RD+KP                     +  + +   +    G
Sbjct: 248 -MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 303

Query: 191 TFGFIAPECITTGNC---NEKSDVYSFGALLLELLTG 224
           T  ++APE + +      N   D +S G +L   L+G
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 38/155 (24%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
           Q+ H NI+            +L+ E V+ G L D +     S  E      +K       
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIK------- 122

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND--KLI------------------ 189
           +I + V YLH   ++ I   D+KP               KLI                  
Sbjct: 123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           GT  F+APE +       ++D++S G +   LL+G
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 35/153 (22%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVA 152
             +SH+ +++  G C +   PI ++ E++A G L +  R           F  +  L++ 
Sbjct: 74  MNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRH------RFQTQQLLEMC 126

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---FI------------- 195
            ++  A+ YL    S+  + RD+      VND   + +  FG   ++             
Sbjct: 127 KDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF 183

Query: 196 -----APECITTGNCNEKSDVYSFGALLLELLT 223
                 PE +     + KSD+++FG L+ E+ +
Sbjct: 184 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 55.3 bits (134), Expect = 2e-09
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 32/151 (21%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
             + H +I+K +G     E P  ++ E    G L   +     S      +   +  +++
Sbjct: 68  KNLDHPHIVKLIGII--EEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQ 121

Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---FI--------------- 195
           I  A+AYL    S   V RDI      V   + + +G FG   +I               
Sbjct: 122 ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI 178

Query: 196 ---APECITTGNCNEKSDVYSFGALLLELLT 223
              +PE I        SDV+ F   + E+L+
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILS 209

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 29/150 (19%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEI 155
            ++SH  ++KF G C +     +V E+++ G L + +   +G  LEP  +   L++  ++
Sbjct: 58  MKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRS-HGKGLEPSQL---LEMCYDV 113

Query: 156 ANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG---FI---------------- 195
              +A+L    S   + RD+      V+ +  + +  FG   ++                
Sbjct: 114 CEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK 170

Query: 196 --APECITTGNCNEKSDVYSFGALLLELLT 223
             APE       + KSDV++FG L+ E+ +
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 41/157 (26%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAM 153
           +++H  I+K      + E   +V E +  G L D++   N    E               
Sbjct: 71  KLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQ------ 122

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL---IG 190
            +  AV YLH      I+ RD+KP                     +  + +   +    G
Sbjct: 123 -MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCG 178

Query: 191 TFGFIAPECITTGNC---NEKSDVYSFGALLLELLTG 224
           T  ++APE + +      N   D +S G +L   L+G
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 31/151 (20%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q  H NI++  G      + ++V E++  G+L   +   +G     F +   + +   + 
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ----FTIMQLVGMLRGVG 161

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF--------------------- 194
             + YL        V RD+      V+ N    +  FG                      
Sbjct: 162 AGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLT 223
              APE I     +  SDV+SFG ++ E+L 
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 30/155 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    +  + NI+ ++   L  +   +V E++A G+L D + +                V
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAV 121

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------F------TTHVNDNDKLIG 190
             E   A+ +LH   S  ++ RDIK                F      T   +    ++G
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE +T      K D++S G + +E++ G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 54.2 bits (131), Expect = 5e-09
 Identities = 38/153 (24%), Positives = 61/153 (39%), Gaps = 36/153 (23%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVA 152
            Q  H +I+K +G    TE P+ ++ E    G L    ++   +        +   +  A
Sbjct: 71  RQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYS------LDLASLILYA 122

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF----------------- 194
            +++ A+AYL    S+  V RDI      V+ ND + +G FG                  
Sbjct: 123 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL 179

Query: 195 ----IAPECITTGNCNEKSDVYSFGALLLELLT 223
               +APE I        SDV+ FG  + E+L 
Sbjct: 180 PIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 54.2 bits (131), Expect = 6e-09
 Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 37/153 (24%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRI-HDPNGSQLEP---FLMKHRLKVAME 154
           S   ++        T   IL+ E+ A G +      +      E     L+K        
Sbjct: 87  SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQ------- 139

Query: 155 IANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND-KLI------------------GT 191
           I   V YLH      IV  D+KP     ++     D K++                  GT
Sbjct: 140 ILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             ++APE +        +D+++ G +   LLT 
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 53.9 bits (130), Expect = 7e-09
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 43/158 (27%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
            Q  H NI++  G   +++  ++V E++  G+L    R HD   + ++   M        
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM------LR 154

Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTH---VNDND--KLIGTFGF-------------- 194
            IA+ + YL        V RD+         +N N   K +  FG               
Sbjct: 155 GIASGMKYLS---DMGYVHRDL---AARNILINSNLVCK-VSDFGLGRVLEDDPEAAYTT 207

Query: 195 ---------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                     +PE I        SDV+S+G +L E+++
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 53.5 bits (129), Expect = 8e-09
 Identities = 37/155 (23%), Positives = 59/155 (38%), Gaps = 37/155 (23%)

Query: 96  SQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRLKVAM 153
            Q SH NI++  G   + +  +++ E++  G L    R  D        F +   + +  
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE------FSVLQLVGMLR 154

Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KLIGTFGF----------------- 194
            IA  + YL    +   V RD+      VN N   K +  FG                  
Sbjct: 155 GIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCK-VSDFGLSRVLEDDPEATYTTSGG 210

Query: 195 ------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                  APE I+       SDV+SFG ++ E++T
Sbjct: 211 KIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 53.5 bits (129), Expect = 8e-09
 Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 28/155 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I+   Q    +++K+ G   +     +V E+   G+++D I   N +  E  +      +
Sbjct: 75  ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT----I 130

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------F------TTHVNDNDKLIG 190
                  + YLH       + RDIK                F      T  +   + +IG
Sbjct: 131 LQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIG 187

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE I     N  +D++S G   +E+  GK
Sbjct: 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 53.5 bits (129), Expect = 9e-09
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 32/153 (20%)

Query: 98  MSHKNILKFVGCCLETEVPI----LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 153
               +I+  +              ++ E +  G L  RI +      + F  +   ++  
Sbjct: 79  SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMR 135

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND-KLI-----------------GT 191
           +I  A+ +LH   S  I  RD+KP    +T+   D   KL                   T
Sbjct: 136 DIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYT 192

Query: 192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
             ++APE +     ++  D++S G ++  LL G
Sbjct: 193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 34/150 (22%)

Query: 100 HKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA 158
           H NI+K        ++   LV E +  G L +RI      + + F       +  ++ +A
Sbjct: 65  HPNIVKLHEVF-HDQLHTFLVMELLNGGELFERIK-----KKKHFSETEASYIMRKLVSA 118

Query: 159 VAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDKL----IGTFGF 194
           V+++H      +V RD+KP                    F      +++       T  +
Sbjct: 119 VSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHY 175

Query: 195 IAPECITTGNCNEKSDVYSFGALLLELLTG 224
            APE +     +E  D++S G +L  +L+G
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSG 205

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 53.1 bits (128), Expect = 1e-08
 Identities = 33/154 (21%), Positives = 55/154 (35%), Gaps = 41/154 (26%)

Query: 100 HKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAMEI 155
           H NI+       +    + +V E +  G L D+I        E     ++         I
Sbjct: 75  HPNIITLKDVY-DDGKYVYVVTELMKGGELLDKILR-QKFFSEREASAVLFT-------I 125

Query: 156 ANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKL---------------------IG 190
              V YLH   ++ +V RD+KP    +     + + +                       
Sbjct: 126 TKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY 182

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           T  F+APE +     +   D++S G LL  +LTG
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 42/155 (27%)

Query: 100 HKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAMEI 155
           H +I+  +    E+   + LVF+ +  G L D + +   +  E     +M+        +
Sbjct: 159 HPHIITLIDSY-ESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRS-------L 209

Query: 156 ANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKL---IGTFGFI 195
             AV++LH   +  IV RD+KP                 F+ H+   +KL    GT G++
Sbjct: 210 LEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYL 266

Query: 196 APECITTGNC------NEKSDVYSFGALLLELLTG 224
           APE +            ++ D+++ G +L  LL G
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 42/155 (27%)

Query: 100 HKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAMEI 155
           H NI++      ET     LVF+ +  G L D + +   +  E     +M+        +
Sbjct: 83  HPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRA-------L 133

Query: 156 ANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKL---IGTFGFI 195
              +  LH      IV RD+KP                 F+  ++  +KL    GT  ++
Sbjct: 134 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 190

Query: 196 APECITTGNC------NEKSDVYSFGALLLELLTG 224
           APE I            ++ D++S G ++  LL G
Sbjct: 191 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 46/171 (26%)

Query: 98  MSHKNILKFVGCCLETEVP-------ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
             H NI++F       +          L+   +  G L + +         P      LK
Sbjct: 83  SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK--KMESRGPLSCDTVLK 140

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKL----- 188
           +  +   AV ++H     PI+ RD+K                    T ++          
Sbjct: 141 IFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQ 199

Query: 189 -----------IGTFGFIAPECI-TTGNC--NEKSDVYSFGALLLELLTGK 225
                        T  +  PE I    N    EK D+++ G +L  L   +
Sbjct: 200 RRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 52.0 bits (125), Expect = 3e-08
 Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 30/155 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +       H N+++     L  E   ++ EF+  G L D +             +    V
Sbjct: 93  VVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATV 146

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------F------TTHVNDNDKLIG 190
              +  A+AYLH   ++ ++ RDIK                F      +  V     L+G
Sbjct: 147 CEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVG 203

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE I+      + D++S G +++E++ G+
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 51.1 bits (122), Expect = 6e-08
 Identities = 29/174 (16%), Positives = 50/174 (28%), Gaps = 56/174 (32%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +  +   +H NI+ +    +      +V  F+A G+  D             L+      
Sbjct: 77  LHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKD-------------LICTHFMD 123

Query: 152 AME---IA-------NAVAYLHVGFSRPIVFRDIKP---------------F-------- 178
            M    IA        A+ Y+H       V R +K                         
Sbjct: 124 GMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180

Query: 179 -----TTHVNDNDKLIGTFGFIAPECITTGNC--NEKSDVYSFGALLLELLTGK 225
                    +     +    +++PE +       + KSD+YS G    EL  G 
Sbjct: 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH 234

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 50.8 bits (122), Expect = 8e-08
 Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 44/162 (27%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   SQ     + K+ G  L+     ++ E++  G+  D             L++     
Sbjct: 71  ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-------------LLEPGPLD 117

Query: 152 AMEIA-------NAVAYLHVGFSRPIVFRDIKP---------------F------TTHVN 183
             +IA         + YLH   S   + RDIK                F      T    
Sbjct: 118 ETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI 174

Query: 184 DNDKLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             +  +GT  ++APE I     + K+D++S G   +EL  G+
Sbjct: 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 34/153 (22%)

Query: 96  SQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAME 154
            Q+ +  I++ +G C      + LV E    G L   +            + +  ++  +
Sbjct: 65  HQLDNPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQ 118

Query: 155 IANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------------- 194
           ++  + YL     +  V RD+      + +     I  FG                    
Sbjct: 119 VSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175

Query: 195 ----IAPECITTGNCNEKSDVYSFGALLLELLT 223
                APECI     + +SDV+S+G  + E L+
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 27/151 (17%), Positives = 54/151 (35%), Gaps = 32/151 (21%)

Query: 97  QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIA 156
           Q+ +  I++ +G C    + + V E    G L   +            + +  ++  +++
Sbjct: 392 QLDNPYIVRLIGVCQAEALML-VMEMAGGGPLHKFLVGKREE----IPVSNVAELLHQVS 446

Query: 157 NAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF--------------------- 194
             + YL     +  V R++      + +     I  FG                      
Sbjct: 447 MGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPL 503

Query: 195 --IAPECITTGNCNEKSDVYSFGALLLELLT 223
              APECI     + +SDV+S+G  + E L+
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALS 534

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 49/159 (30%)

Query: 97  QMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHR------- 148
           Q+ +  I++ +G C        LV E    G L              +L ++R       
Sbjct: 74  QLDNPYIVRMIGIC--EAESWMLVMEMAELGPLNK------------YLQQNRHVKDKNI 119

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF------------- 194
           +++  +++  + YL        V RD+      +       I  FG              
Sbjct: 120 IELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176

Query: 195 ----------IAPECITTGNCNEKSDVYSFGALLLELLT 223
                      APECI     + KSDV+SFG L+ E  +
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 36/157 (22%)

Query: 96  SQMSHKNILKFVGCCL-ETEVPILVFEFVACGTLADRIHDPNGSQL-EPFLMKHRLKVAM 153
                  I++  G  +  T+V I   E    GT A+++       + E  L K    + +
Sbjct: 79  KSHDCPYIVQCFGTFITNTDVFI-AMEL--MGTCAEKLKKRMQGPIPERILGK----MTV 131

Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN--------------------DKLIGTFG 193
            I  A+ YL       ++ RD+KP    +++                     D+  G   
Sbjct: 132 AIVKALYYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA 189

Query: 194 FIAPECITTGNCNE-----KSDVYSFGALLLELLTGK 225
           ++APE I   +  +     ++DV+S G  L+EL TG+
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 47.7 bits (114), Expect = 9e-07
 Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 52/165 (31%)

Query: 100 HKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEP---FLMKHRLKVAMEI 155
           H+N+L+ +    E E    LVFE +  G++   IH       E     +++        +
Sbjct: 70  HRNVLELIEFF-EEEDRFYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQD-------V 120

Query: 156 ANAVAYLHVGFSRPIVFRDIKP----FTTHVNDND-KLI--------------------- 189
           A+A+ +LH   ++ I  RD+KP           +  K+                      
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177

Query: 190 -----GTFGFIAPECITTGNCNEKS-----DVYSFGALLLELLTG 224
                G+  ++APE +   +          D++S G +L  LL+G
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 28/128 (21%)

Query: 118 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP 177
            + + +  G L   +     SQ   F        A EI   + ++H   +R +V+RD+KP
Sbjct: 269 FILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKP 320

Query: 178 ------FTTHV----------NDNDK---LIGTFGFIAPECITTGNCNEKS-DVYSFGAL 217
                    HV              K    +GT G++APE +  G   + S D +S G +
Sbjct: 321 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 380

Query: 218 LLELLTGK 225
           L +LL G 
Sbjct: 381 LFKLLRGH 388

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 47.0 bits (112), Expect = 1e-06
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 28/154 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           + F  ++ H N +++ GC L      LV E+   G+ +D +        E  +      V
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA----AV 159

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLIGTFGF 194
                  +AYLH   S  ++ RD+K                    + +   +  +GT  +
Sbjct: 160 THGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYW 216

Query: 195 IAPECITTGNC---NEKSDVYSFGALLLELLTGK 225
           +APE I   +    + K DV+S G   +EL   K
Sbjct: 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 250

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 53/161 (32%)

Query: 98  MSHKNILKF--VGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRL----- 149
           ++H NI+K   V   +ETE  + L+ E+ + G + D +               R+     
Sbjct: 71  LNHPNIVKLFEV---IETEKTLYLIMEYASGGEVFDYLVA-----------HGRMKEKEA 116

Query: 150 -KVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLI-- 189
                +I +AV Y H    + IV RD+K                  F+       KL   
Sbjct: 117 RSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF 173

Query: 190 -GTFGFIAPECIT----TGNCNEKSDVYSFGALLLELLTGK 225
            G   + APE        G    + DV+S G +L  L++G 
Sbjct: 174 CGAPPYAAPELFQGKKYDG---PEVDVWSLGVILYTLVSGS 211

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 36/159 (22%)

Query: 98  MSHKNILKFVGC--------CLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           M  K IL  V            ET+  + LV   +  G +  R H  N  +  P   + R
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDI--RYHIYNVDEDNPGFQEPR 290

Query: 149 LKV-AMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK-- 187
                 +I + + +LH    R I++RD+KP         +V                K  
Sbjct: 291 AIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347

Query: 188 -LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
              GT GF+APE +     +   D ++ G  L E++  +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 33/164 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLAD--RIHDPNGSQLEPFLMKHRL 149
           I   SQ  H NI+ +    +  +   LV + ++ G++ D  +     G      L +  +
Sbjct: 64  IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123

Query: 150 KVAM-EIANAVAYLHVGFSRPIVFRDIKP---------------F--------TTHVNDN 185
              + E+   + YLH       + RD+K                F           +  N
Sbjct: 124 ATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 180

Query: 186 DK---LIGTFGFIAPECITTGNC-NEKSDVYSFGALLLELLTGK 225
                 +GT  ++APE +      + K+D++SFG   +EL TG 
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGA 224

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 26/97 (26%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------F-----TTHVNDNDK---L 188
             EI +A+ YLH    + I+ RD+KP               F      +  +   +    
Sbjct: 136 TAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 192

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           +GT  +++PE +T  +  + SD+++ G ++ +L+ G 
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 229

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 45.4 bits (108), Expect = 5e-06
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 26/95 (27%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLI---GTFG 193
           E+  A+ YL    ++ I+ RD+KP                     +    ++    GT  
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKP 179

Query: 194 FIAPECITTGNCNEKS---DVYSFGALLLELLTGK 225
           ++APE  ++      S   D +S G    ELL G+
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 44.9 bits (107), Expect = 6e-06
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 38/159 (23%)

Query: 96  SQMSHKNILKFVGCCL-ETEVPILVFEFVACGT----LADRIHDPNGSQLEPFLMKHRLK 150
             +     + F G    E +V I   E     T       ++ D   +  E  L K    
Sbjct: 61  RTVDCPFTVTFYGALFREGDVWI-CMEL--MDTSLDKFYKQVIDKGQTIPEDILGK---- 113

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN--------------------DKLIG 190
           +A+ I  A+ +LH      ++ RD+KP    +N                      D   G
Sbjct: 114 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAG 171

Query: 191 TFGFIAPECITTGNC----NEKSDVYSFGALLLELLTGK 225
              ++APE I         + KSD++S G  ++EL   +
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 45.2 bits (107), Expect = 7e-06
 Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 35/157 (22%)

Query: 98  MSHKNILKFVGC--------CLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           ++ K IL+ V            ET+  + LV   +  G L   I+         F     
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARA 288

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV-----------NDNDK---L 188
           +  A EI   +  LH      IV+RD+KP         H+            +       
Sbjct: 289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 345

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           +GT G++APE +         D ++ G LL E++ G+
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 44.6 bits (106), Expect = 9e-06
 Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 31/156 (19%)

Query: 96  SQMSHKNILKFVGCCL-ETEVPILVFEFVACGT-LADRIHDPNGSQLEPFLMKHRLKVAM 153
                  I++F G    E +  I   E     T              +    +   K+ +
Sbjct: 76  RSSDCPYIVQFYGALFREGDCWI-CMEL--MSTSFDKFYKYVYSVLDDVIPEEILGKITL 132

Query: 154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KL------------------IGTFG 193
               A+ +L    +  I+ RDIKP    ++ +   KL                   G   
Sbjct: 133 ATVKALNHLK--ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP 190

Query: 194 FIAPECITTGNCNE----KSDVYSFGALLLELLTGK 225
           ++APE I      +    +SDV+S G  L EL TG+
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 44.6 bits (106), Expect = 9e-06
 Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 39/163 (23%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP---FLMKHR 148
           I   +   H  I+K +G         ++ EF   G +   + + +    EP    + +  
Sbjct: 67  IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQM 126

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------F------TTHVNDNDK 187
           L+       A+ +LH   S+ I+ RD+K                F         +   D 
Sbjct: 127 LE-------ALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176

Query: 188 LIGTFGFIAPECITTGNC-----NEKSDVYSFGALLLELLTGK 225
            IGT  ++APE +          + K+D++S G  L+E+   +
Sbjct: 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 37/161 (22%)

Query: 92  IAFASQMSHKNILKFVGCCLE--TEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
           IA   ++ H N++K V   L+   E  + +VFE V  G + +          +P      
Sbjct: 87  IAILKKLDHPNVVKLV-EVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQA 139

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLIGT 191
                ++   + YLH    + I+ RDIKP                  +     +D L+  
Sbjct: 140 RFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196

Query: 192 F----GFIAPECITTGNCN---EKSDVYSFGALLLELLTGK 225
                 F+APE ++        +  DV++ G  L   + G+
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 21/91 (23%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK-LIGTFG 193
           A +I     YLH   S  +++RD+KP                 F   V      L GT  
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE 203

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTG 224
            +APE I +   N+  D ++ G L+ E+  G
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 26/117 (22%)

Query: 130 DRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL- 188
           +    P     +   ++H +  + ++A  + +L    SR  + RD+      +++ + + 
Sbjct: 177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVK 233

Query: 189 IGTFGF----------------------IAPECITTGNCNEKSDVYSFGALLLELLT 223
           I  FG                       +APE I       +SDV+SFG LL E+ +
Sbjct: 234 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 41.8 bits (99), Expect = 7e-05
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 24/93 (25%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK---LIGTF 192
           E+A A+ +LH   S  I++RD+KP         H+            +   K     GT 
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTV 190

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            ++APE +      + +D +SFG L+ E+LTG 
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGT 223

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 41.9 bits (99), Expect = 8e-05
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 41/160 (25%)

Query: 98  MSHKNILKFVG---------CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
            + K++ +             C +TE  +  V E+V  G L   +      +      +H
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-----RQRKLPEEH 154

Query: 148 -RLKVAMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK- 187
            R   A EI+ A+ YLH    R I++RD+K          H+               D  
Sbjct: 155 ARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210

Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
               GT  +IAPE +   +     D ++ G L+ E++ G+
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 41.6 bits (98), Expect = 9e-05
 Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 39/167 (23%)

Query: 92  IAFASQMS-HKNILKFVGCCLETEVPI------LVFEFVACGTLADRIHDPNGSQLEPFL 144
           I    + S H+NI  + G  ++   P       LV EF   G++ D I +  G+ L+   
Sbjct: 71  INMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-- 128

Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP---------------F------TTHVN 183
            +    +  EI   +++LH      ++ RDIK                F         V 
Sbjct: 129 -EWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 184

Query: 184 DNDKLIGTFGFIAPECITTGNC-----NEKSDVYSFGALLLELLTGK 225
             +  IGT  ++APE I          + KSD++S G   +E+  G 
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 36/160 (22%), Positives = 61/160 (38%), Gaps = 41/160 (25%)

Query: 98  MSHKNILKFVG---------CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
            + K++ +             C +TE  +  V E+V  G L   +      +      +H
Sbjct: 57  QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-----RQRKLPEEH 111

Query: 148 -RLKVAMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK- 187
            R   A EI+ A+ YLH    R I++RD+K          H+               D  
Sbjct: 112 ARFYSA-EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 167

Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
               GT  +IAPE +   +     D ++ G L+ E++ G+
Sbjct: 168 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 24/93 (25%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK---LIGTF 192
           EI+ A+ +LH    + I++RD+KP         HV            +D        GT 
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTI 185

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            ++APE +     N   D +S GAL+ ++LTG 
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA 218

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 52/161 (32%)

Query: 98  MSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA---- 152
           ++H+N++KF G          L  E+ + G L DRI                +       
Sbjct: 62  LNHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRI-----------EPDIGMPEPDAQR 109

Query: 153 --MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF--------------- 194
              ++   V YLH      I  RDIKP    +++ D L I  FG                
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166

Query: 195 -------IAPECIT----TGNCNEKSDVYSFGALLLELLTG 224
                  +APE +          E  DV+S G +L  +L G
Sbjct: 167 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 204

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 39/162 (24%)

Query: 95  ASQMSHKNILKFVG--------CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLM 145
           A  ++   +L+              +T   +  V E+   G L   +        E    
Sbjct: 193 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFS 246

Query: 146 KHRLKV-AMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDND 186
           + R +    EI +A+ YLH    + +V+RD+K          H+             D  
Sbjct: 247 EDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304

Query: 187 K---LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                 GT  ++APE +   +     D +  G ++ E++ G+
Sbjct: 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 38/161 (23%), Positives = 56/161 (34%), Gaps = 52/161 (32%)

Query: 98  MSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA---- 152
           ++H+N++KF G          L  E+ + G L DRI                +       
Sbjct: 62  LNHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRI-----------EPDIGMPEPDAQR 109

Query: 153 --MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF--------------- 194
              ++   V YLH      I  RDIKP    +++ D L I  FG                
Sbjct: 110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166

Query: 195 -------IAPECIT----TGNCNEKSDVYSFGALLLELLTG 224
                  +APE +          E  DV+S G +L  +L G
Sbjct: 167 MCGTLPYVAPELLKRREFHA---EPVDVWSCGIVLTAMLAG 204

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 24/95 (25%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK---LIG 190
             EI +A+ YLH   SR +V+RDIK          H+            +D        G
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 167

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE +   +     D +  G ++ E++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 24/95 (25%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK---LIG 190
           A EIA+A+ YLH   S  IV+RD+KP         H+              N       G
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCG 201

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE +     +   D +  GA+L E+L G 
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 40/158 (25%), Positives = 58/158 (36%), Gaps = 39/158 (24%)

Query: 98  MSHKNILKFVG---------CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           M  K +L             C  +T+  +  V E++  G L   I          F +  
Sbjct: 65  MVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-----SCHKFDLSR 119

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDKLI 189
               A EI   + +LH   S+ IV+RD+K          H+              + K  
Sbjct: 120 ATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN 176

Query: 190 ---GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG 224
              GT  +IAPE +     N   D +SFG LL E+L G
Sbjct: 177 TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 27/96 (28%)

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP------FTTHV-------------NDNDK---LIGT 191
           EI  A+ +LH      I++RDIK          HV             ++ ++     GT
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 223

Query: 192 FGFIAPECITTGNCNEKSDV--YSFGALLLELLTGK 225
             ++AP+ +  G+      V  +S G L+ ELLTG 
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 50/163 (30%)

Query: 98  MSHKNILKFVG-CCLETEVPI-LVFEFVACGT--LADRIHDPNGSQLEPFLMKHRLKVAM 153
           + HKN+++ V     E +  + +V E+  CG   + D +             + R  V  
Sbjct: 63  LRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSV------------PEKRFPVCQ 110

Query: 154 ------EIANAVAYLHVGFSRPIVFRDIKP--------------------FTTHVNDNDK 187
                 ++ + + YLH   S+ IV +DIKP                           +D 
Sbjct: 111 AHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167

Query: 188 LI---GTFGFIAPECITTGNCNE--KSDVYSFGALLLELLTGK 225
                G+  F  PE     +     K D++S G  L  + TG 
Sbjct: 168 CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 42/162 (25%), Positives = 61/162 (37%), Gaps = 39/162 (24%)

Query: 95  ASQMSHKNILKFVG---------CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFL 144
              M  K +L   G          C +T   +  V E+V  G L   I      Q+  F 
Sbjct: 386 ECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-----QVGRFK 440

Query: 145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDND 186
             H +  A EIA  + +L    S+ I++RD+K          H+             D  
Sbjct: 441 EPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497

Query: 187 K---LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                 GT  +IAPE I      +  D ++FG LL E+L G+
Sbjct: 498 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 38/137 (27%)

Query: 118 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV-AMEIANAVAYLHVGFSRPIVFRDIK 176
           LV E+   G L   +     S+    +     +    EI  A+  +H       V RDIK
Sbjct: 138 LVMEYYVGGDLLTLL-----SKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIK 189

Query: 177 P------FTTHV-------------NDNDK---LIGTFGFIAPECITTGNCNEKSDVY-- 212
           P         H+             +   +    +GT  +++PE +        +  Y  
Sbjct: 190 PDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGP 249

Query: 213 -----SFGALLLELLTG 224
                + G    E+  G
Sbjct: 250 ECDWWALGVFAYEMFYG 266

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 39.4 bits (93), Expect = 5e-04
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 21/91 (23%)

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDK-LIGTFG 193
           A E+  A+ YLH   S+ I++RD+KP                 F  +V D    L GT  
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPD 168

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTG 224
           +IAPE ++T   N+  D +SFG L+ E+L G
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 39.4 bits (92), Expect = 5e-04
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 23/88 (26%)

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------------FIAP 197
            + +LH   S  I+ RD+KP    V  +  L I  FG                   + AP
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232

Query: 198 ECITTGNCNEKSDVYSFGALLLELLTGK 225
           E I      E  D++S G ++ E++  K
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHK 260

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 39.1 bits (92), Expect = 6e-04
 Identities = 42/159 (26%), Positives = 61/159 (38%), Gaps = 39/159 (24%)

Query: 98  MSHKNILKFVG---------CCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           M  K +L   G          C +T   +  V E+V  G L   I      Q+  F   H
Sbjct: 68  MVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-----QVGRFKEPH 122

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP------FTTHV------------NDNDK-- 187
            +  A EIA  + +L    S+ I++RD+K          H+             D     
Sbjct: 123 AVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 179

Query: 188 -LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
              GT  +IAPE I      +  D ++FG LL E+L G+
Sbjct: 180 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 51/160 (31%)

Query: 98  MSHKNILKF--VGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA-- 152
           + H NI++F  V   + T   + ++ E+ + G L +RI               R      
Sbjct: 73  LRHPNIVRFKEV---ILTPTHLAIIMEYASGGELYERI-----------CNAGRFSEDEA 118

Query: 153 ----MEIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLIGTFGF---------- 194
                ++ + V+Y H   S  I  RD+K              K I  FG+          
Sbjct: 119 RFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLK-ICDFGYSKSSVLHSQP 174

Query: 195 ---------IAPECIT-TGNCNEKSDVYSFGALLLELLTG 224
                    IAPE +       + +DV+S G  L  +L G
Sbjct: 175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 47/139 (33%)

Query: 118 LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM------EIANAVAYLHVGFSRPIV 171
           +V E++             G  L   +  + +          E+  A+  +H   S   +
Sbjct: 146 MVMEYM------------PGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFI 190

Query: 172 FRDIKP-----------------FTTHVNDNDK-----LIGTFGFIAPECITT----GNC 205
            RD+KP                     +N          +GT  +I+PE + +    G  
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYY 250

Query: 206 NEKSDVYSFGALLLELLTG 224
             + D +S G  L E+L G
Sbjct: 251 GRECDWWSVGVFLYEMLVG 269

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 23/88 (26%)

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG-------------------FIAP 197
            + +LH   S  I+ RD+KP    V  +  L I  FG                   + AP
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195

Query: 198 ECITTGNCNEKSDVYSFGALLLELLTGK 225
           E I      E  D++S G ++ E++ G 
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGG 223

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	227
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.98
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.98
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.97
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.96
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.96
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.96
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.96
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.96
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.96
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.96
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.96
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.96
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.96
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.96
3uqc_A	286	Probable conserved transmembrane protein; structur	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.95
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.95
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.95
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.95
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.95
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.95
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.95
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.95
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.95
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.95
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.95
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.94
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.94
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.94
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.94
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.9
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.82
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.58
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.19
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.98
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.62
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.43
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.4
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.1
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.66
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.54
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.43
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.32
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.15
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.97
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	89.24
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	87.79
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	81.88
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	81.05

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=280.44  Aligned_cols=159  Identities=25%  Similarity=0.403  Sum_probs=134.9

Q ss_pred             hcCCCCCC-eeecCCC-eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhh
Q 040292           59 TNNYDPGK-GFLQDHP-ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI  132 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~-vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l  132 (227)
                      .++|..++ |.+.+.. ||.++.....    +.|.  +|+.+|++++|||||+++|+|.+ +..++|||||++|+|.+++
T Consensus        46 ~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~--~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l  122 (307)
T 3omv_A           46 SGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFR--NEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHL  122 (307)
T ss_dssp             CCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHHHHH
T ss_pred             eCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHH
Confidence            44455544 6655545 9988754433    4677  99999999999999999999864 5689999999999999999


Q ss_pred             cCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------e
Q 040292          133 HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------I  189 (227)
Q Consensus       133 ~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~  189 (227)
                      .....    ++++.++..++.|++.||+|||   +++|+||||||+|||+++++.+                       +
T Consensus       123 ~~~~~----~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~  195 (307)
T 3omv_A          123 HVQET----KFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT  195 (307)
T ss_dssp             HTSCC----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CC
T ss_pred             hhcCC----CCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccc
Confidence            76542    7899999999999999999999   8999999999999999876432                       6


Q ss_pred             cccCccccccccC---CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          190 GTFGFIAPECITT---GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       190 g~~~y~aPE~~~~---~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||+.|||||++..   ..|+.++|||||||++|||+||+.|
T Consensus       196 GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~P  236 (307)
T 3omv_A          196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP  236 (307)
T ss_dssp             CCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCC
Confidence            9999999999853   4589999999999999999999987

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.2e-41  Score=277.87  Aligned_cols=149  Identities=27%  Similarity=0.495  Sum_probs=131.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCC--------CCCCccc
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPN--------GSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~--------~~~~~~l  143 (227)
                      ||+++.....  ++|.  +|+.+|++++|||||+++|+|.+++..++|||||++|+|.+++...+        ......+
T Consensus        48 vK~l~~~~~~~~~~f~--~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l  125 (299)
T 4asz_A           48 VKTLKDASDNARKDFH--REAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL  125 (299)
T ss_dssp             EEEECSCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCC
T ss_pred             EEEeCCCChHHHHHHH--HHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCC
Confidence            8999765443  5677  99999999999999999999999999999999999999999997532        1122368


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECI  200 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~  200 (227)
                      +|.++..++.|++.||+|||   +++|+||||||+|||+++++.+                       .||+.|+|||++
T Consensus       126 ~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~  202 (299)
T 4asz_A          126 TQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI  202 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHH
Confidence            99999999999999999999   8999999999999999876532                       588999999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+..++.++|||||||++|||+| |+.|
T Consensus       203 ~~~~~~~k~DVwS~Gvvl~Ellt~G~~P  230 (299)
T 4asz_A          203 MYRKFTTESDVWSLGVVLWEIFTYGKQP  230 (299)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999999999 8877

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.4e-40  Score=278.58  Aligned_cols=146  Identities=29%  Similarity=0.412  Sum_probs=132.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.+|++++|||||++++++.+++..|+|||||+||+|.+++....+   ..+++..+.
T Consensus        54 iK~i~~~~~~~~~~~~~~--~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~---~~~~e~~~~  128 (350)
T 4b9d_A           54 IKEINISRMSSKEREESR--REVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKG---VLFQEDQIL  128 (350)
T ss_dssp             EEEEECTTSCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTT---CCCCHHHHH
T ss_pred             EEEEehHHCCHHHHHHHH--HHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCC---CCCCHHHHH
Confidence            9999765433    3566  999999999999999999999999999999999999999999965432   257889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.|++.||+|||   +++|+||||||+|||++.++.+                     +||+.|+|||++.+..|+.+
T Consensus       129 ~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~  205 (350)
T 4b9d_A          129 DWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNK  205 (350)
T ss_dssp             HHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHH
T ss_pred             HHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcH
Confidence            99999999999999   9999999999999999987654                     69999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+||++|||+||+.|
T Consensus       206 ~DiwSlGvilyemltG~~P  224 (350)
T 4b9d_A          206 SDIWALGCVLYELCTLKHA  224 (350)
T ss_dssp             HHHHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHHHHCCCC
Confidence            9999999999999999987

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.6e-41  Score=277.04  Aligned_cols=164  Identities=20%  Similarity=0.371  Sum_probs=137.4

Q ss_pred             hcCCCCCC-eeecC-------CC--eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccC
Q 040292           59 TNNYDPGK-GFLQD-------HP--ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVAC  125 (227)
Q Consensus        59 ~~~f~~~~-~~~~~-------~~--vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  125 (227)
                      .++|..++ |.+.+       ..  ||+++.....   ++|.  +|+.++++++|||||+++|+|.+++..++|||||++
T Consensus        36 ~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~--~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~  113 (308)
T 4gt4_A           36 EDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR--HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH  113 (308)
T ss_dssp             ECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSS
T ss_pred             cCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHH--HHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCC
Confidence            45566554 65522       12  8998765433   5677  999999999999999999999999999999999999


Q ss_pred             CChhhhhcCCCCC-----------CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------
Q 040292          126 GTLADRIHDPNGS-----------QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------  188 (227)
Q Consensus       126 gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------  188 (227)
                      |+|.++|......           ....++|..+..++.|++.||+|||   +++|+||||||+|||+++++.+      
T Consensus       114 G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~Ki~DFG  190 (308)
T 4gt4_A          114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLG  190 (308)
T ss_dssp             CBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCSC
T ss_pred             CcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCEEECCcc
Confidence            9999999654211           1126899999999999999999999   8999999999999999875432      


Q ss_pred             -----------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 -----------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 -----------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                                       +||+.|+|||++.+..++.++|||||||++|||+| |+.|
T Consensus       191 lar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~P  247 (308)
T 4gt4_A          191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP  247 (308)
T ss_dssp             CBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCC
Confidence                             58889999999999999999999999999999998 7776

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.4e-40  Score=278.11  Aligned_cols=143  Identities=21%  Similarity=0.404  Sum_probs=130.6

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||++......  +.+.  +|+.+|++++|||||++++++.+++..|+|||||+||+|.+++...      .+++..+..+
T Consensus       104 iK~i~~~~~~~~~~~~--~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~------~l~e~~~~~~  175 (346)
T 4fih_A          104 VKKMDLRKQQRRELLF--NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAV  175 (346)
T ss_dssp             EEEEEGGGCSSGGGGH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHS------CCCHHHHHHH
T ss_pred             EEEEecCchhHHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcC------CCCHHHHHHH
Confidence            9998654333  4566  9999999999999999999999999999999999999999999742      6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||+|||   +++|+||||||+|||++.++.+                     +||+.|+|||++.+..|+.++|
T Consensus       176 ~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~D  252 (346)
T 4fih_A          176 CLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD  252 (346)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHH
Confidence            999999999999   9999999999999999887543                     7999999999999889999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|||++|++|
T Consensus       253 iWSlGvilyeml~G~~P  269 (346)
T 4fih_A          253 IWSLGIMVIEMVDGEPP  269 (346)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            99999999999999987

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3e-40  Score=275.47  Aligned_cols=149  Identities=24%  Similarity=0.453  Sum_probs=132.3

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC----------CCc
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS----------QLE  141 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~----------~~~  141 (227)
                      ||+++.....  ++|.  +|+.+|++++|||||+++|+|.+++..++|||||++|+|.+++......          ...
T Consensus        76 vK~l~~~~~~~~~~f~--~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~  153 (329)
T 4aoj_A           76 VKALKEASESARQDFQ--REAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG  153 (329)
T ss_dssp             EEEESCCSHHHHHHHH--HHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CC
T ss_pred             EEEECcCCHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCC
Confidence            8999765433  5677  9999999999999999999999999999999999999999999764321          113


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPE  198 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE  198 (227)
                      +++|.++..++.|++.||+|||   +++|+||||||+|||+++++.+                       +||+.|+|||
T Consensus       154 ~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE  230 (329)
T 4aoj_A          154 PLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE  230 (329)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChh
Confidence            6899999999999999999999   8999999999999999886533                       5889999999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++.+..++.++|||||||++|||+| |+.|
T Consensus       231 ~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~P  260 (329)
T 4aoj_A          231 SILYRKFTTESDVWSFGVVLWEIFTYGKQP  260 (329)
T ss_dssp             HHTTCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             hhcCCCCCccccccchHHHHHHHHcCCCCC
Confidence            9999999999999999999999999 8877

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.7e-40  Score=269.49  Aligned_cols=159  Identities=25%  Similarity=0.376  Sum_probs=131.7

Q ss_pred             hhcCCCCCC-eeec--CCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee----CCcceeEeeccc
Q 040292           58 ATNNYDPGK-GFLQ--DHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVA  124 (227)
Q Consensus        58 ~~~~f~~~~-~~~~--~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~  124 (227)
                      ..++|+.+. |...  +..  ||.+......    +.|.  +|+.+|++++|||||+++++|..    ++..|+|||||+
T Consensus        35 G~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~--~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~  112 (290)
T 3fpq_A           35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK--EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT  112 (290)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             ecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCC
Confidence            445566555 4432  222  7888654332    4566  99999999999999999999865    245789999999


Q ss_pred             CCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCceeecC-CCce-------------
Q 040292          125 CGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP--IVFRDIKPFTTHVND-NDKL-------------  188 (227)
Q Consensus       125 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~--i~H~dlkp~nil~~~-~~~~-------------  188 (227)
                      +|+|.+++....     ++++..+..++.|++.||+|||   +++  |+||||||+|||++. ++.+             
T Consensus       113 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          113 SGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            999999997643     7899999999999999999999   777  999999999999974 4432             


Q ss_pred             ------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                            +||+.|+|||++.+ .|+.++|||||||++|||+||+.|
T Consensus       185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~P  228 (290)
T 3fpq_A          185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  228 (290)
T ss_dssp             TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCC
Confidence                  69999999998864 699999999999999999999987

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.7e-40  Score=273.86  Aligned_cols=144  Identities=22%  Similarity=0.341  Sum_probs=130.8

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.+|++++|||||++++++.+++..|+|||||+||+|.+++...+     .+++..+
T Consensus        62 iK~i~k~~~~~~~~~~~~~--~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~-----~l~e~~~  134 (311)
T 4aw0_A           62 IKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-----SFDETCT  134 (311)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-----SCCHHHH
T ss_pred             EEEEEHHHCCCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC-----CCCHHHH
Confidence            89886432     124566  99999999999999999999999999999999999999999997654     7899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ..++.|++.||+|||   +++|+||||||+|||++.++.+                       +||+.|+|||++.+..|
T Consensus       135 ~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y  211 (311)
T 4aw0_A          135 RFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA  211 (311)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCB
T ss_pred             HHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCC
Confidence            999999999999999   9999999999999999876532                       69999999999999899


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+||+||++|||+||+.|
T Consensus       212 ~~~~DiWSlGvilyeml~G~~P  233 (311)
T 4aw0_A          212 CKSSDLWALGCIIYQLVAGLPP  233 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999987

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=9.3e-40  Score=279.53  Aligned_cols=143  Identities=21%  Similarity=0.404  Sum_probs=130.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||++......  +.+.  +|+.+|++++|||||+++++|..++..|+|||||+||+|.+++...      .+++.++..+
T Consensus       181 iK~i~~~~~~~~~~~~--~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~------~l~e~~~~~~  252 (423)
T 4fie_A          181 VKKMDLRKQQRRELLF--NEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHT------RMNEEQIAAV  252 (423)
T ss_dssp             EEEEESTTCSSGGGHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHS------CCCHHHHHHH
T ss_pred             EEEEeccchhHHHHHH--HHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhcc------CCCHHHHHHH
Confidence            9998755443  4555  9999999999999999999999999999999999999999999642      5899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||+|||   +++|+||||||+|||++.++.+                     +||+.|||||++.+..|+.++|
T Consensus       253 ~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~D  329 (423)
T 4fie_A          253 CLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVD  329 (423)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHH
Confidence            999999999999   9999999999999999887643                     7999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|||++|++|
T Consensus       330 iWSlGvilyeml~G~~P  346 (423)
T 4fie_A          330 IWSLGIMVIEMVDGEPP  346 (423)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            99999999999999987

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=9.4e-40  Score=272.35  Aligned_cols=141  Identities=20%  Similarity=0.294  Sum_probs=128.8

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      ||+++...   .+.  +|+.+|++++|||||++++++.+++..|+|||||+||+|.+++...+     ++++..+..++.
T Consensus        88 iK~i~~~~---~~~--~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-----~l~e~~~~~~~~  157 (336)
T 4g3f_A           88 VKKVRLEV---FRV--EELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-----CLPEDRALYYLG  157 (336)
T ss_dssp             EEEEETTT---CCT--HHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS-----SCCHHHHHHHHH
T ss_pred             EEEECHHH---hHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcC-----CCCHHHHHHHHH
Confidence            88886532   233  89999999999999999999999999999999999999999997654     789999999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-e--------------------------ecccCccccccccCCCCC
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-L--------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-~--------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      |++.||+|||   +++|+||||||+|||++.++. +                          +||+.|+|||++.+..|+
T Consensus       158 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~  234 (336)
T 4g3f_A          158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD  234 (336)
T ss_dssp             HHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCC
Confidence            9999999999   999999999999999987652 2                          589999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+||++|||+||++|
T Consensus       235 ~~~DiwSlGvilyemltG~~P  255 (336)
T 4g3f_A          235 AKVDIWSSCCMMLHMLNGCHP  255 (336)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             cHHHHHHHHHHHHHHHHCcCC
Confidence            999999999999999999987

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.7e-40  Score=271.58  Aligned_cols=144  Identities=24%  Similarity=0.342  Sum_probs=126.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    ..+.  +|+.+|++++|||||++++++.+++..|+|||||+||+|.+++....     ++++..+.
T Consensus        57 iK~i~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-----~l~e~~~~  129 (304)
T 3ubd_A           57 MKVLKKATLKVRDRVRTK--MERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV-----MFTEEDVK  129 (304)
T ss_dssp             EEEEESEEEEEEECC--------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHC-----CCCHHHHH
T ss_pred             EEEEehHHcChHHHHHHH--HHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcC-----CCCHHHHH
Confidence            8888654322    3455  99999999999999999999999999999999999999999997654     68999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .++.|++.||+|||   +++|+||||||+|||++.++.+                     +||+.|+|||++.+..|+.+
T Consensus       130 ~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~  206 (304)
T 3ubd_A          130 FYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQS  206 (304)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTH
T ss_pred             HHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCC
Confidence            99999999999999   9999999999999999887643                     69999999999999999999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+||++|||+||+.|
T Consensus       207 ~DiwSlGvilyemltG~~P  225 (304)
T 3ubd_A          207 ADWWSFGVLMFEMLTGTLP  225 (304)
T ss_dssp             HHHHHHHHHHHHHHHSSCS
T ss_pred             CcccchHHHHHHHHhCCCC
Confidence            9999999999999999988

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=4.2e-39  Score=261.91  Aligned_cols=143  Identities=22%  Similarity=0.341  Sum_probs=124.9

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++.....     +.+.  +|+.+|++++|||||++++++.+++..|+||||+ +|+|.+++...+     ++++..+
T Consensus        43 iK~i~~~~~~~~~~~~~~~--~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~-----~l~e~~~  114 (275)
T 3hyh_A           43 LKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRD-----KMSEQEA  114 (275)
T ss_dssp             EEEEECC------CHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSC-----SCCHHHH
T ss_pred             EEEEeHHHcCCHHHHHHHH--HHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcC-----CCCHHHH
Confidence            8988754322     3456  9999999999999999999999999999999999 689999997654     7999999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCC-Cc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNC-NE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~-~~  207 (227)
                      ..++.|++.||+|||   +++|+||||||+||+++.++.+                    +||+.|+|||++.+..+ +.
T Consensus       115 ~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~  191 (275)
T 3hyh_A          115 RRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP  191 (275)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCT
T ss_pred             HHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCC
Confidence            999999999999999   9999999999999999887643                    69999999999988775 57


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|+||+.|
T Consensus       192 ~~DiwSlGvily~lltg~~P  211 (275)
T 3hyh_A          192 EVDVWSCGVILYVMLCRRLP  211 (275)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             hhhhHHHHHHHHHHHHCCCC
Confidence            99999999999999999987

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.7e-39  Score=267.20  Aligned_cols=162  Identities=21%  Similarity=0.320  Sum_probs=129.5

Q ss_pred             hcCCCCCC-eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC----cceeEeecccCCChhhh
Q 040292           59 TNNYDPGK-GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE----VPILVFEFVACGTLADR  131 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV~E~~~~gsL~~~  131 (227)
                      .++|..++ |.++|..  ||+++.... +++....|+..+.+++|||||+++|+|.+++    ..|||||||++|+|.++
T Consensus        13 ~G~fG~Vy~~~~~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~   91 (303)
T 3hmm_A           13 KGRFGEVWRGKWRGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY   91 (303)
T ss_dssp             ECSSSEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH
T ss_pred             eCCCeEEEEEEECCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHH
Confidence            34455544 7776655  999875432 3333226777778899999999999998764    46899999999999999


Q ss_pred             hcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEecCCCCceeecCCCce------------------
Q 040292          132 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG-----FSRPIVFRDIKPFTTHVNDNDKL------------------  188 (227)
Q Consensus       132 l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-----~~~~i~H~dlkp~nil~~~~~~~------------------  188 (227)
                      ++..      +++|..+..++.|++.||+|||..     ..++|+||||||+|||++.++.+                  
T Consensus        92 l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  165 (303)
T 3hmm_A           92 LNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI  165 (303)
T ss_dssp             HHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred             HHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCce
Confidence            9753      688999999999999999999932     12399999999999999886533                  


Q ss_pred             -------ecccCccccccccCC------CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -------IGTFGFIAPECITTG------NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -------~g~~~y~aPE~~~~~------~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                             +||+.|+|||++.+.      .++.++|||||||++|||+||.+|
T Consensus       166 ~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~  217 (303)
T 3hmm_A          166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI  217 (303)
T ss_dssp             SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCB
T ss_pred             eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCC
Confidence                   589999999999754      357899999999999999999754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.6e-37  Score=254.66  Aligned_cols=144  Identities=24%  Similarity=0.394  Sum_probs=122.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCc------------ceeEeecccCCChhhhhcCCCCC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEV------------PILVFEFVACGTLADRIHDPNGS  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~------------~~lV~E~~~~gsL~~~l~~~~~~  138 (227)
                      ||+++.....   +.+.  +|+.+|++++|||||++++++.+.+.            .|+|||||++|+|.+++..... 
T Consensus        35 iK~i~~~~~~~~~~~~~--~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~-  111 (299)
T 4g31_A           35 IKRIRLPNRELAREKVM--REVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT-  111 (299)
T ss_dssp             EEEEEECSSHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCS-
T ss_pred             EEEEeccCCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCC-
Confidence            8988755443   4566  99999999999999999999976543            6899999999999999986542 


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------  188 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------  188 (227)
                       ....++..+..++.|++.||+|||   +++|+||||||+|||++.++.+                              
T Consensus       112 -~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~  187 (299)
T 4g31_A          112 -IEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH  187 (299)
T ss_dssp             -GGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCCCC----------------------
T ss_pred             -CChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccccccccccccc
Confidence             124556678899999999999999   9999999999999999876532                              


Q ss_pred             ---ecccCccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          189 ---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 ---~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                         +||+.|+|||++.+..|+.++||||+||++|||+++
T Consensus       188 ~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~P  226 (299)
T 4g31_A          188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYP  226 (299)
T ss_dssp             ----CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSC
T ss_pred             CCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccC
Confidence               489999999999999999999999999999999973

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=8.2e-38  Score=262.87  Aligned_cols=149  Identities=19%  Similarity=0.397  Sum_probs=127.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCC-cccceeEEEEeeC-CcceeEeecccCCChhhhhcCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSH-KNILKFVGCCLET-EVPILVFEFVACGTLADRIHDPNG-----------  137 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~-----------  137 (227)
                      ||.++.....   ++|.  +|+.+|.+++| ||||+++|+|.+. +..++|||||++|+|.++|.....           
T Consensus        99 vK~l~~~~~~~~~~~~~--~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~  176 (353)
T 4ase_A           99 VKMLKEGATHSEHRALM--SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  176 (353)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC------
T ss_pred             EEEEccccChHHHHHHH--HHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchh
Confidence            7888765544   3566  99999999965 9999999999765 568999999999999999964321           


Q ss_pred             CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCc
Q 040292          138 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGF  194 (227)
Q Consensus       138 ~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y  194 (227)
                      .....+++..+..++.|++.||+|||   +++|+||||||+|||+++++.+                       +||+.|
T Consensus       177 ~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~y  253 (353)
T 4ase_A          177 LYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  253 (353)
T ss_dssp             -CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGG
T ss_pred             hccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccc
Confidence            01125899999999999999999999   9999999999999999875432                       588899


Q ss_pred             cccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          195 IAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       195 ~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ||||++.+..|+.++|||||||++|||+| |+.|
T Consensus       254 mAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~P  287 (353)
T 4ase_A          254 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP  287 (353)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             cCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCC
Confidence            99999999999999999999999999998 8877

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.1e-36  Score=254.92  Aligned_cols=143  Identities=22%  Similarity=0.391  Sum_probs=124.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||+++.....    +.+.  +|+.+|++++|||||++++++...      +..|+|||||. |+|.+++....     ++
T Consensus        84 iK~i~~~~~~~~~~~~~~--~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~-----~l  155 (398)
T 4b99_A           84 IKKIPNAFDVVTNAKRTL--RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQ-----PL  155 (398)
T ss_dssp             EEEETTTTSSHHHHHHHH--HHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSS-----CC
T ss_pred             EEEECccccchHHHHHHH--HHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcC-----CC
Confidence            9999765443    3455  999999999999999999998643      56799999996 78999997654     79


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPE  198 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE  198 (227)
                      ++..+..++.|++.||+|||   +++|+||||||+|||++.++.+                         +||+.|+|||
T Consensus       156 ~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APE  232 (398)
T 4b99_A          156 TLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE  232 (398)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHH
Confidence            99999999999999999999   9999999999999999876532                         6999999999


Q ss_pred             cccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          199 CITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       199 ~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.+. .++.++||||+||++|||++|++|
T Consensus       233 v~~~~~~~~~~~DiWSlG~il~ell~G~~p  262 (398)
T 4b99_A          233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQL  262 (398)
T ss_dssp             HHTTCSCCCTHHHHHHHHHHHHHHHHTSCS
T ss_pred             HhcCCCCCCChhheehhHHHHHHHHHCCCC
Confidence            98875 468999999999999999999987

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.5e-35  Score=250.07  Aligned_cols=141  Identities=21%  Similarity=0.327  Sum_probs=126.3

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+........+.  +|+.+|+++ +|||||++++++.+.+..|+||||+++|+|.+++.        .+++.++..++
T Consensus        54 iK~i~~~~~~~~~~--~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~  123 (361)
T 4f9c_A           54 LKHLIPTSHPIRIA--AELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN--------SLSFQEVREYM  123 (361)
T ss_dssp             EEEECTTSCHHHHH--HHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT--------TCCHHHHHHHH
T ss_pred             EEEEccccCHHHHH--HHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc--------CCCHHHHHHHH
Confidence            88887665555666  999999998 79999999999999999999999999999999984        57889999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCC-Cc--------------------------------------------
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-DK--------------------------------------------  187 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~-~~--------------------------------------------  187 (227)
                      .|++.||+|||   +++|+||||||+|||++.+ +.                                            
T Consensus       124 ~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (361)
T 4f9c_A          124 LNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRR  200 (361)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC---------------------
T ss_pred             HHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccccccccccccccccccc
Confidence            99999999999   9999999999999999764 21                                            


Q ss_pred             -----eecccCccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 -----LIGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 -----~~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                           .+||++|+|||++.+. .++.++||||+||++|||++|+.|
T Consensus       201 ~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P  246 (361)
T 4f9c_A          201 QQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP  246 (361)
T ss_dssp             -----CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred             ccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence                 1489999999999876 489999999999999999999987

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=7.1e-35  Score=259.36  Aligned_cols=145  Identities=19%  Similarity=0.293  Sum_probs=130.0

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.+|++++|||||++++++.+.+..|+|||||+||+|.+++....+    .+++.++..+
T Consensus       187 iK~i~~~~~~~~~~~~--~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~----~l~e~~~~~~  260 (573)
T 3uto_A          187 AKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN----KMSEDEAVEY  260 (573)
T ss_dssp             EEEEECCSHHHHHHHH--HHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTS----CEEHHHHHHH
T ss_pred             EEEEeccchhhHHHHH--HHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCC----CCCHHHHHHH
Confidence            8888655433  3455  999999999999999999999999999999999999999999975442    6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC--Cc--------------------eecccCccccccccCCCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN--DK--------------------LIGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~--~~--------------------~~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      +.|++.||+|||   +++|+||||||+|||++.+  +.                    .+||+.|+|||++.+..|+.++
T Consensus       261 ~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~  337 (573)
T 3uto_A          261 MRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT  337 (573)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHH
T ss_pred             HHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHH
Confidence            999999999999   9999999999999999754  22                    1699999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||+||++|||++|++|
T Consensus       338 DiWSlGvilyeml~G~~P  355 (573)
T 3uto_A          338 DMWSVGVLSYILLSGLSP  355 (573)
T ss_dssp             HHHHHHHHHHHHHHSCCS
T ss_pred             HHHHHHHHHHHHHHCCCC
Confidence            999999999999999987

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1e-34  Score=259.42  Aligned_cols=130  Identities=22%  Similarity=0.376  Sum_probs=120.0

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +++.+++.++|||||+++++|.+.+..|+|||||+||+|.+++...+     .+++..+..++.||+.||+|||   +++
T Consensus       241 ~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH---~~g  312 (689)
T 3v5w_A          241 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMH---NRF  312 (689)
T ss_dssp             HHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---TTT
T ss_pred             HHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCC
Confidence            34677888999999999999999999999999999999999997654     7899999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce-------------------ecccCccccccccC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |+||||||+|||++.++.+                   +||+.|+|||++.. ..|+.++|+||+||++|||++|++|
T Consensus       313 IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~P  390 (689)
T 3v5w_A          313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP  390 (689)
T ss_dssp             EECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999987654                   79999999999975 4699999999999999999999988

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=8.5e-33  Score=229.51  Aligned_cols=180  Identities=29%  Similarity=0.549  Sum_probs=148.3

Q ss_pred             CCcccccHHHHHHhhcCCCCCC------------eeecCCC---eEEEcCCCCc---ccccchhHHHHHhcCCCccccee
Q 040292           45 YPIRNFIALELEGATNNYDPGK------------GFLQDHP---ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKF  106 (227)
Q Consensus        45 ~~~~~~~~~~l~~~~~~f~~~~------------~~~~~~~---vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l  106 (227)
                      ...+.|++.++..++++|....            +...++.   ||.+......   ..+.  +|+.++++++||||+++
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQ--TEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHH--HHHHGGGTCCCTTBCCC
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHH--HHHHHHHhccCCCccce
Confidence            4567799999999999987766            2222222   7877655433   3456  99999999999999999


Q ss_pred             EEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC
Q 040292          107 VGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       107 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                      ++++...+..++||||+++|+|.+++....... .++++..+..++.|++.||.|||..+..+++||||||+||+++.++
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~  171 (326)
T 3uim_A           93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQ-PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEF  171 (326)
T ss_dssp             CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTC-CCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTC
T ss_pred             EEEEecCCceEEEEEeccCCCHHHHHHhccccC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCC
Confidence            999999999999999999999999998654322 2689999999999999999999932222999999999999998875


Q ss_pred             ce----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          187 KL----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       187 ~~----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+                      .||+.|+|||.+.+..++.++||||||+++|+|++|+.|
T Consensus       172 ~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  234 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA  234 (326)
T ss_dssp             CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCS
T ss_pred             CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCc
Confidence            33                      388899999999888899999999999999999999987

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.98  E-value=1.3e-32  Score=228.13  Aligned_cols=173  Identities=31%  Similarity=0.530  Sum_probs=141.3

Q ss_pred             cccHHHHHHhhcCCCCCC------------eeecCCC---eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEe
Q 040292           49 NFIALELEGATNNYDPGK------------GFLQDHP---ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCL  111 (227)
Q Consensus        49 ~~~~~~l~~~~~~f~~~~------------~~~~~~~---vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~  111 (227)
                      ++++.++..++++|....            +...++.   ||.+......  +.+.  +|+.++++++||||+++++++.
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~  105 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE--TEIETLSFCRHPHLVSLIGFCD  105 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHH--HHHHGGGSCCCTTBCCEEEECC
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHH--HHHHHHHhCCCCCEeeEEEEEc
Confidence            355555555666665443            3333233   7877655443  4566  9999999999999999999999


Q ss_pred             eCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---
Q 040292          112 ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---  188 (227)
Q Consensus       112 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---  188 (227)
                      .++..++||||+++|+|.+++...... ...+++..+..++.|++.||.|||   +++++||||||+||+++.++.+   
T Consensus       106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~  181 (321)
T 2qkw_B          106 ERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKIT  181 (321)
T ss_dssp             CTTCCEEEEECCTTCBTGGGSSSSCCC-SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEEC
T ss_pred             CCCeEEEEEEcCCCCcHHHHHhccCCC-ccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEe
Confidence            999999999999999999999764321 125899999999999999999999   8999999999999999876532   


Q ss_pred             --------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 --------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 --------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                          .||+.|+|||.+.+..++.++||||||+++|||++|+.|
T Consensus       182 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p  240 (321)
T 2qkw_B          182 DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA  240 (321)
T ss_dssp             CCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred             ecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence                                378899999999888899999999999999999999876

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.98  E-value=1.3e-31  Score=222.56  Aligned_cols=143  Identities=22%  Similarity=0.391  Sum_probs=128.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++...      .+++..+..+
T Consensus        75 vK~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~l~~~~~~~i  146 (321)
T 2c30_A           75 VKMMDLRKQQRRELLF--NEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV------RLNEEQIATV  146 (321)
T ss_dssp             EEEEETTTCCSHHHHH--HHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC------CCCHHHHHHH
T ss_pred             EEEEeccchhHHHHHH--HHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc------CCCHHHHHHH
Confidence            8888755443  4566  9999999999999999999999999999999999999999998642      5889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||++.+..++.++|
T Consensus       147 ~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  223 (321)
T 2c30_A          147 CEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVD  223 (321)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhh
Confidence            999999999999   8999999999999999876532                     5888999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||||+++|+|++|+.|
T Consensus       224 v~slG~il~el~~g~~p  240 (321)
T 2c30_A          224 IWSLGIMVIEMVDGEPP  240 (321)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=7.8e-32  Score=221.80  Aligned_cols=174  Identities=28%  Similarity=0.539  Sum_probs=145.7

Q ss_pred             CcccccHHHHHHhhcCCCCC------C------------eeecCCC--eEEEcCCCC------cccccchhHHHHHhcCC
Q 040292           46 PIRNFIALELEGATNNYDPG------K------------GFLQDHP--ISEFGDNLN------TEEYYCFNCIAFASQMS   99 (227)
Q Consensus        46 ~~~~~~~~~l~~~~~~f~~~------~------------~~~~~~~--vK~~~~~~~------~~~~~~~~Ei~~l~~l~   99 (227)
                      ....|++.++..++++|+..      .            +..++..  ||.+.....      .+.+.  +|+.++++++
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~--~E~~~l~~l~   88 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFD--QEIKVMAKCQ   88 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHH--HHHHHHHHCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHH--HHHHHHHhcC
Confidence            45679999999999999877      2            2223333  888765322      14566  9999999999


Q ss_pred             CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCc
Q 040292          100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFT  179 (227)
Q Consensus       100 H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~n  179 (227)
                      ||||+++++++...+..++||||+++++|.+++......  .++++..+..++.|++.||.|||   +.+++||||||+|
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~N  163 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSAN  163 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGC--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGG
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHH
Confidence            999999999999999999999999999999998753221  26889999999999999999999   8999999999999


Q ss_pred             eeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          180 THVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       180 il~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |+++.++.+                       .||+.|+|||.+.+ .++.++||||||+++|+|++|.+|
T Consensus       164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p  233 (307)
T 2nru_A          164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPA  233 (307)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCS
T ss_pred             EEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCC
Confidence            999876432                       47888999998864 578999999999999999999876

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=1e-31  Score=226.91  Aligned_cols=144  Identities=24%  Similarity=0.361  Sum_probs=129.2

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......        +.+.  +|+.+|++++||||+++++++...+..++||||+++|+|.+++....     .+++
T Consensus        42 vK~i~~~~~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~l~~  114 (361)
T 2yab_A           42 AKFIKKRQSRASRRGVCREEIE--REVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSE  114 (361)
T ss_dssp             EEEEEBCSSTTCSSSBCHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCS-----CCBH
T ss_pred             EEEEEccccccccchhHHHHHH--HHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcC-----CCCH
Confidence            8888755432        3456  99999999999999999999999999999999999999999997643     6899


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----ce--------------------ecccCcccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----KL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----~~--------------------~g~~~y~aPE~~~  201 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||+++.++    .+                    +||+.|+|||++.
T Consensus       115 ~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  191 (361)
T 2yab_A          115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN  191 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHc
Confidence            999999999999999999   89999999999999997654    11                    5889999999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++|+||+||++|+|++|.+|
T Consensus       192 ~~~~~~~~DiwslGvil~~ll~g~~P  217 (361)
T 2yab_A          192 YEPLGLEADMWSIGVITYILLSGASP  217 (361)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCC
Confidence            88899999999999999999999987

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=5.4e-32  Score=223.81  Aligned_cols=154  Identities=29%  Similarity=0.454  Sum_probs=131.8

Q ss_pred             eeecCCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCC
Q 040292           67 GFLQDHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQL  140 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~  140 (227)
                      +...+..  ||.+......    +.+.  +|+.++++++||||+++++++...+..++||||+++|+|.+++.....  .
T Consensus        56 ~~~~~~~vavK~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~  131 (309)
T 3p86_A           56 AEWHGSDVAVKILMEQDFHAERVNEFL--REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGA--R  131 (309)
T ss_dssp             EEETTEEEEEEEECCCCCSHHHHHHHH--HHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTH--H
T ss_pred             EEECCCcEEEEEecCCCCCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCC--C
Confidence            4444444  8888765433    3566  999999999999999999999999999999999999999999986431  1


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCceeecCCCce---------------------ecccCcccc
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSRP--IVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAP  197 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~~--i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aP  197 (227)
                      ..+++..+..++.|++.||.|||   +.+  ++||||||+||+++.++.+                     .||+.|+||
T Consensus       132 ~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  208 (309)
T 3p86_A          132 EQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP  208 (309)
T ss_dssp             HHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----------------CCTTSCH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCCCCccccCh
Confidence            14889999999999999999999   888  9999999999999877533                     588899999


Q ss_pred             ccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          198 ECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       198 E~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |.+.+..++.++||||||+++|+|++|+.|
T Consensus       209 E~~~~~~~~~~~DiwslG~il~elltg~~P  238 (309)
T 3p86_A          209 EVLRDEPSNEKSDVYSFGVILWELATLQQP  238 (309)
T ss_dssp             HHHTTCCCCTTHHHHHHHHHHHHHHHCCCT
T ss_pred             hhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999988899999999999999999999887

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.97  E-value=8.3e-32  Score=222.17  Aligned_cols=145  Identities=28%  Similarity=0.474  Sum_probs=128.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++.+++..++||||+++|+|.+++.....    .+++..+..+
T Consensus        40 ~K~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i  113 (310)
T 3s95_A           40 MKELIRFDEETQRTFL--KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS----QYPWSQRVSF  113 (310)
T ss_dssp             EEEESCCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCT----TSCHHHHHHH
T ss_pred             EEEeccCCHHHHHHHH--HHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccC----CCCHHHHHHH
Confidence            7777554333  4566  999999999999999999999999999999999999999999976432    6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------------------ecccCccc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------------------IGTFGFIA  196 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------------------~g~~~y~a  196 (227)
                      +.|++.||+|||   +.+++||||||+||+++.++.+                                   .||+.|+|
T Consensus       114 ~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  190 (310)
T 3s95_A          114 AKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMA  190 (310)
T ss_dssp             HHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCC
T ss_pred             HHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeC
Confidence            999999999999   8999999999999999876532                                   47888999


Q ss_pred             cccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          197 PECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       197 PE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||++.+..++.++||||||+++|||++|..|
T Consensus       191 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~  221 (310)
T 3s95_A          191 PEMINGRSYDEKVDVFSFGIVLCEIIGRVNA  221 (310)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHTCCS
T ss_pred             HHHhcCCCCCcHHHHHHHHHHHHHHhcCCCC
Confidence            9999998999999999999999999999865

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=4.8e-32  Score=222.80  Aligned_cols=143  Identities=24%  Similarity=0.384  Sum_probs=128.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++...      .+++..+..+
T Consensus        50 iK~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~  121 (297)
T 3fxz_A           50 IRQMNLQQQPKKELII--NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAV  121 (297)
T ss_dssp             EEEEEGGGCSCHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS------CCCHHHHHHH
T ss_pred             EEEeecccccHHHHHH--HHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhc------CCCHHHHHHH
Confidence            8887654433  4556  9999999999999999999999999999999999999999999753      5788999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||.+.+..++.++|
T Consensus       122 ~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  198 (297)
T 3fxz_A          122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD  198 (297)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHH
T ss_pred             HHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHH
Confidence            999999999999   8999999999999999876532                     5888999999999889999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|+|++|+.|
T Consensus       199 iwslG~il~ell~g~~p  215 (297)
T 3fxz_A          199 IWSLGIMAIEMIEGEPP  215 (297)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999987

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=4.3e-32  Score=234.43  Aligned_cols=145  Identities=20%  Similarity=0.247  Sum_probs=127.7

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++...     ..+.+.  +|+.++..++||||++++++|.+++..|+||||+++|+|.+++.....    .+++..+
T Consensus       104 vK~~~~~~~~~~~~~~~~~--~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~----~l~e~~~  177 (437)
T 4aw2_A          104 MKILNKWEMLKRAETACFR--EERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED----RLPEEMA  177 (437)
T ss_dssp             EEEEEHHHHHHTTTTCCHH--HHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTT----CCCHHHH
T ss_pred             EEEEEHHHhhhHHHHHHHH--HHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccC----CCCHHHH
Confidence            78775421     123466  999999999999999999999999999999999999999999986432    6899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCcccccccc-----
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECIT-----  201 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~-----  201 (227)
                      ..++.|++.||.|||   +.+|+||||||+||+++.++.+                      +||+.|+|||++.     
T Consensus       178 ~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~  254 (437)
T 4aw2_A          178 RFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG  254 (437)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccC
Confidence            999999999999999   8999999999999999876532                      6899999999986     


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ...++.++|||||||++|||++|++|
T Consensus       255 ~~~~~~~~DvwSlGvil~elltG~~P  280 (437)
T 4aw2_A          255 KGRYGPECDWWSLGVCMYEMLYGETP  280 (437)
T ss_dssp             CCEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCCCCcCeeHHHHHHHHHHHhCCCC
Confidence            45689999999999999999999987

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=3.3e-32  Score=227.02  Aligned_cols=144  Identities=22%  Similarity=0.343  Sum_probs=128.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.+|++++||||+++++++...+..++||||+++|+|.+++....     .+++..+.
T Consensus        45 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~l~~~~~~  117 (328)
T 3fe3_A           45 IKIIDKTQLNPTSLQKLF--REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG-----RMKEKEAR  117 (328)
T ss_dssp             EEEEEGGGSCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC-----CCCHHHHH
T ss_pred             EEEEEhhcCCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcC-----CCCHHHHH
Confidence            8888654332    3455  99999999999999999999999999999999999999999997543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCC-ch
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCN-EK  208 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~-~~  208 (227)
                      .++.|++.||+|||   +.+++||||||+||+++.++.+                    +||+.|+|||.+.+..+. .+
T Consensus       118 ~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  194 (328)
T 3fe3_A          118 SKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPE  194 (328)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHH
T ss_pred             HHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCch
Confidence            99999999999999   8999999999999999876543                    588999999999887764 89


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+||++|+|++|+.|
T Consensus       195 ~DiwslG~il~ell~g~~p  213 (328)
T 3fe3_A          195 VDVWSLGVILYTLVSGSLP  213 (328)
T ss_dssp             HHHHHHHHHHHHHHHSSCS
T ss_pred             hhhhhhHHHHHHHHhCCCC
Confidence            9999999999999999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=6.8e-32  Score=225.95  Aligned_cols=144  Identities=19%  Similarity=0.320  Sum_probs=128.5

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++...     ..+.+.  +|+.+|++++||||+++++++...+..++||||+++|+|.+++....     .+++..+
T Consensus        35 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~~~~~  107 (337)
T 1o6l_A           35 MKILRKEVIIAKDEVAHTV--TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERA  107 (337)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----CCCHHHH
T ss_pred             EEEEeHHHhhhhhHHHHHH--HHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            88886432     123455  99999999999999999999999999999999999999999987543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||+|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++.
T Consensus       108 ~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  184 (337)
T 1o6l_A          108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  184 (337)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCT
T ss_pred             HHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCc
Confidence            999999999999999   8999999999999999876533                     5899999999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+||++|||++|+.|
T Consensus       185 ~~DiwslG~il~ell~g~~P  204 (337)
T 1o6l_A          185 AVDWWGLGVVMYEMMCGRLP  204 (337)
T ss_dssp             THHHHHHHHHHHHHHHSSCS
T ss_pred             hhhcccchhHHHHHhcCCCC
Confidence            99999999999999999987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.97  E-value=7.1e-32  Score=221.39  Aligned_cols=144  Identities=27%  Similarity=0.440  Sum_probs=128.0

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     ++++..+
T Consensus        41 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~  113 (294)
T 4eqm_A           41 IKAIFIPPREKEETLKRFE--REVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-----PLSVDTA  113 (294)
T ss_dssp             EEEEECCSSCCHHHHHHHH--HHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-----SCCHHHH
T ss_pred             EEEeccCccccHHHHHHHH--HHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcC-----CCCHHHH
Confidence            8887654332     3566  99999999999999999999999999999999999999999997543     6899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                      .||+.|+|||.+.+..++
T Consensus       114 ~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  190 (294)
T 4eqm_A          114 INFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD  190 (294)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCC
Confidence            999999999999999   8999999999999999876533                      488999999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+|+++|+|++|+.|
T Consensus       191 ~~~Di~slG~~l~~ll~g~~p  211 (294)
T 4eqm_A          191 ECTDIYSIGIVLYEMLVGEPP  211 (294)
T ss_dssp             TTHHHHHHHHHHHHHHHSSCS
T ss_pred             chHhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999987

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=8.4e-32  Score=223.83  Aligned_cols=145  Identities=20%  Similarity=0.272  Sum_probs=128.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.+...... +.+.  +|+.+++.++||||+++++++...+..++||||+++|+|.+++.....    ++++..+..++
T Consensus        35 ~K~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~----~~~~~~~~~i~  108 (321)
T 1tki_A           35 AKFVKVKGTDQVLVK--KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF----ELNEREIVSYV  108 (321)
T ss_dssp             EEEECCCTHHHHHHH--HHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC----CCCHHHHHHHH
T ss_pred             EEEEecCcccHHHHH--HHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCC----CCCHHHHHHHH
Confidence            7777644332 3566  999999999999999999999999999999999999999999976432    68899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecC--CCce--------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVND--NDKL--------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~--~~~~--------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||+++.  ++.+                    .||+.|+|||++.+..++.++|
T Consensus       109 ~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  185 (321)
T 1tki_A          109 HQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD  185 (321)
T ss_dssp             HHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHH
T ss_pred             HHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhh
Confidence            99999999999   899999999999999986  3221                    5888999999998888899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+|+++|+|++|..|
T Consensus       186 iwslG~il~~ll~g~~p  202 (321)
T 1tki_A          186 MWSLGTLVYVLLSGINP  202 (321)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999987

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=9.2e-32  Score=223.44  Aligned_cols=144  Identities=26%  Similarity=0.448  Sum_probs=129.0

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++...     ..+.+.  +|+.+++.++||||+++++++.+.+..++||||+++|+|.+++....     .+++..+
T Consensus        36 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~  108 (318)
T 1fot_A           36 MKVLKKEIVVRLKQVEHTN--DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-----RFPNPVA  108 (318)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTS-----SCCHHHH
T ss_pred             EEEEEHHHhhhhhHHHHHH--HHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcC-----CCCHHHH
Confidence            88876432     124455  89999999999999999999999999999999999999999997643     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||.|||   +++++||||||+||+++.++.+                  +||+.|+|||++.+..++.++|
T Consensus       109 ~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  185 (318)
T 1fot_A          109 KFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSID  185 (318)
T ss_dssp             HHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccc
Confidence            999999999999999   9999999999999999876543                  5899999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +||+||++|||++|+.|
T Consensus       186 iwslG~il~ell~g~~p  202 (318)
T 1fot_A          186 WWSFGILIYEMLAGYTP  202 (318)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             hhhhHHHHHHHHhCCCC
Confidence            99999999999999987

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=1.5e-31  Score=225.78  Aligned_cols=144  Identities=23%  Similarity=0.376  Sum_probs=128.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++.+++..++||||+++|+|.+++....     .+++..+.
T Consensus        59 vK~~~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~  131 (362)
T 2bdw_A           59 AKIINTKKLSARDFQKLE--REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-----FYSEADAS  131 (362)
T ss_dssp             EEEEETTTCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS-----CCCHHHHH
T ss_pred             EEEEEcccCCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC-----CCCHHHHH
Confidence            8888765433    3455  99999999999999999999999999999999999999999997653     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------eecccCccccccccCCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------LIGTFGFIAPECITTGNCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------~~g~~~y~aPE~~~~~~~~  206 (227)
                      .++.|++.||.|||   +.+|+||||||+||+++.++.                       ..||+.|+|||++.+..++
T Consensus       132 ~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  208 (362)
T 2bdw_A          132 HCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS  208 (362)
T ss_dssp             HHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCC
Confidence            99999999999999   899999999999999975431                       1588999999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+||++|+|++|++|
T Consensus       209 ~~~DiwslG~il~~ll~g~~P  229 (362)
T 2bdw_A          209 KPVDIWACGVILYILLVGYPP  229 (362)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             chhhHHHHHHHHHHHHHCCCC
Confidence            999999999999999999987

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=226.74  Aligned_cols=148  Identities=21%  Similarity=0.244  Sum_probs=127.3

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCC---CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMS---HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+... ...++.  +|+.++.+++   |+||+++++++..++..++||||+++|+|.+++..........+++..+..
T Consensus       100 vK~~~~~-~~~~~~--~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~  176 (365)
T 3e7e_A          100 LKVQKPA-NPWEFY--IGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVIS  176 (365)
T ss_dssp             EEEESSC-CHHHHH--HHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHH
T ss_pred             EEEeCCC-ChhHHH--HHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHH
Confidence            7777643 334566  8888888886   999999999999999999999999999999999742111112689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-----------CCce-----------------------ecccCccc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-----------NDKL-----------------------IGTFGFIA  196 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-----------~~~~-----------------------~g~~~y~a  196 (227)
                      ++.|++.||+|||   +.+|+||||||+||+++.           ++.+                       +||+.|+|
T Consensus       177 i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a  253 (365)
T 3e7e_A          177 FAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQC  253 (365)
T ss_dssp             HHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCC
T ss_pred             HHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCC
Confidence            9999999999999   999999999999999976           3322                       48999999


Q ss_pred             cccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          197 PECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       197 PE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||++.+..++.++|||||||++|||+||+.|
T Consensus       254 PE~~~~~~~~~~~DiwslG~il~elltg~~p  284 (365)
T 3e7e_A          254 VEMLSNKPWNYQIDYFGVAATVYCMLFGTYM  284 (365)
T ss_dssp             HHHHTTCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred             hHHhcCCCCCccccHHHHHHHHHHHHhCCCc
Confidence            9999998899999999999999999999976

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=1e-31  Score=228.49  Aligned_cols=144  Identities=19%  Similarity=0.333  Sum_probs=127.3

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.+|++++||||+++++++...+..++||||+++|+|.+++....     .+++..+
T Consensus        45 iK~~~~~~~~~~~~~~~~~--~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~l~~~~~  117 (384)
T 4fr4_A           45 MKYMNKQKCVERNEVRNVF--KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV-----HFKEETV  117 (384)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTC-----CCCHHHH
T ss_pred             EEEEehhhcccHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcC-----CCCHHHH
Confidence            88775432     113455  99999999999999999999999999999999999999999998654     6899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC---CCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT---GNC  205 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~---~~~  205 (227)
                      ..++.|++.||.|||   +.+|+||||||+||+++.++.+                    +||+.|+|||++..   ..+
T Consensus       118 ~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~  194 (384)
T 4fr4_A          118 KLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGY  194 (384)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCB
T ss_pred             HHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCC
Confidence            999999999999999   8999999999999999876543                    58999999999964   358


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|+|||||++|||++|+.|
T Consensus       195 ~~~~DiwSlG~il~elltG~~P  216 (384)
T 4fr4_A          195 SFAVDWWSLGVTAYELLRGRRP  216 (384)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CccceeechHHHHHHHHhCCCC
Confidence            8999999999999999999987

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.8e-31  Score=220.98  Aligned_cols=144  Identities=24%  Similarity=0.367  Sum_probs=128.7

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......        +.+.  +|+.+|++++||||+++++++..++..++||||+++++|.+++....     .+++
T Consensus        41 vK~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~  113 (326)
T 2y0a_A           41 AKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTE  113 (326)
T ss_dssp             EEEEEBCCSTTCSSSBCHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSS-----CCBH
T ss_pred             EEEEEccccccccchhhHHHHH--HHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcC-----CcCH
Confidence            8887654321        3466  99999999999999999999999999999999999999999997643     6899


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----ce--------------------ecccCcccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----KL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----~~--------------------~g~~~y~aPE~~~  201 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||+++.++    .+                    .||+.|+|||++.
T Consensus       114 ~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  190 (326)
T 2y0a_A          114 EEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN  190 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeec
Confidence            999999999999999999   89999999999999998765    11                    5888999999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++|||||||++|+|++|..|
T Consensus       191 ~~~~~~~~DiwslG~il~~ll~g~~p  216 (326)
T 2y0a_A          191 YEPLGLEADMWSIGVITYILLSGASP  216 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCcCC
Confidence            88899999999999999999999987

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=8.4e-32  Score=229.87  Aligned_cols=144  Identities=22%  Similarity=0.360  Sum_probs=128.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++.....     +.+.  +|..++.++ +||||+++++++...+..++||||+++|+|.+++....     .+++..
T Consensus        82 vK~~~k~~~~~~~~~~~~~--~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-----~l~~~~  154 (396)
T 4dc2_A           82 MRVVKKELVNDDEDIDWVQ--TEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEH  154 (396)
T ss_dssp             EEEEEGGGTC----CCHHH--HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEEhhhccCHHHHHHHH--HHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcC-----CCCHHH
Confidence            8888654322     3355  899999887 89999999999999999999999999999999997543     689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +.+|+||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       155 ~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~  231 (396)
T 4dc2_A          155 ARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYG  231 (396)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCC
Confidence            9999999999999999   8999999999999999876543                     689999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|||++|++|
T Consensus       232 ~~~DiwslGvllyell~G~~P  252 (396)
T 4dc2_A          232 FSVDWWALGVLMFEMMAGRSP  252 (396)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             hHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999987

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=6.7e-32  Score=217.86  Aligned_cols=153  Identities=20%  Similarity=0.344  Sum_probs=129.8

Q ss_pred             eeecCCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCC
Q 040292           67 GFLQDHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGS  138 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~  138 (227)
                      +..++..  ||.+......    +.+.  +|+.++++++||||+++++++...  +..++||||+++|+|.+++..... 
T Consensus        29 ~~~~~~~~avK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-  105 (271)
T 3kmu_A           29 GRWQGNDIVVKVLKVRDWSTRKSRDFN--EECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTN-  105 (271)
T ss_dssp             EEETTEEEEEEEECCTTCCHHHHHHHH--HHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSS-
T ss_pred             EEECCeeEEEEEecccccCHHHHHHHH--HHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhccc-
Confidence            4444444  8888765433    3566  999999999999999999999877  678999999999999999986432 


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCceeecCCCce----------------ecccCccccccc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRP--IVFRDIKPFTTHVNDNDKL----------------IGTFGFIAPECI  200 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~--i~H~dlkp~nil~~~~~~~----------------~g~~~y~aPE~~  200 (227)
                        .++++..+..++.|++.||.|||   +.+  ++||||||+||+++.++..                .||+.|+|||.+
T Consensus       106 --~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~  180 (271)
T 3kmu_A          106 --FVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEAL  180 (271)
T ss_dssp             --CCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHH
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeecccCccCCccccChhhh
Confidence              25889999999999999999999   888  9999999999999987643                578899999999


Q ss_pred             cCCCC---CchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TTGNC---NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~~~~---~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+..+   +.++||||||+++|||++|+.|
T Consensus       181 ~~~~~~~~~~~~Di~slG~il~el~~g~~p  210 (271)
T 3kmu_A          181 QKKPEDTNRRSADMWSFAVLLWELVTREVP  210 (271)
T ss_dssp             HSCGGGSCHHHHHHHHHHHHHHHHHHCSCT
T ss_pred             ccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            86544   3489999999999999999887

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=1.6e-31  Score=216.20  Aligned_cols=145  Identities=27%  Similarity=0.503  Sum_probs=129.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +++.  +|+.++++++||||+++++++.+++..++||||+++++|.+++.....    .+++..+..++
T Consensus        39 vK~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~  112 (269)
T 4hcu_A           39 IKTIREGAMSEEDFI--EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG----LFAAETLLGMC  112 (269)
T ss_dssp             EEEECTTSBCHHHHH--HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTT----CCCHHHHHHHH
T ss_pred             EEEecccccCHHHHH--HHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCc----ccCHHHHHHHH
Confidence            8888765543 5677  999999999999999999999999999999999999999999976542    68899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+.+..++.++|
T Consensus       113 ~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  189 (269)
T 4hcu_A          113 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD  189 (269)
T ss_dssp             HHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhh
Confidence            99999999999   8999999999999999876543                      3456799999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||+|+++|+|++ |+.|
T Consensus       190 i~slG~~l~~ll~~g~~p  207 (269)
T 4hcu_A          190 VWSFGVLMWEVFSEGKIP  207 (269)
T ss_dssp             HHHHHHHHHHHHTTSCCT
T ss_pred             hHHHHHHHHHHhcCCCCC
Confidence            9999999999999 7766

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=2e-31  Score=223.99  Aligned_cols=144  Identities=28%  Similarity=0.378  Sum_probs=121.5

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      ||.+......+.+.  +|+.++++++||||+++++++...+..++||||+++|+|.+++....     .+++..+..++.
T Consensus        83 vK~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~~  155 (349)
T 2w4o_A           83 LKVLKKTVDKKIVR--TEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-----YYSERDAADAVK  155 (349)
T ss_dssp             EEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCS-----SCCHHHHHHHHH
T ss_pred             EEEeccchhHHHHH--HHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcC-----CCCHHHHHHHHH
Confidence            88888765556777  99999999999999999999999999999999999999999997654     688999999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecC---CCc--------------------eecccCccccccccCCCCCchhh
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVND---NDK--------------------LIGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~---~~~--------------------~~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      |++.||.|||   +.+++||||||+||+++.   ++.                    ..||+.|+|||++.+..++.++|
T Consensus       156 qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  232 (349)
T 2w4o_A          156 QILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVD  232 (349)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccc
Confidence            9999999999   899999999999999974   322                    15889999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      ||||||++|||++|+.|
T Consensus       233 iwslG~il~ell~g~~p  249 (349)
T 2w4o_A          233 MWSVGIITYILLCGFEP  249 (349)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             hHHHHHHHHHHHhCCCC
Confidence            99999999999999876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.97  E-value=1.5e-31  Score=231.85  Aligned_cols=153  Identities=23%  Similarity=0.405  Sum_probs=133.1

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC-cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE-VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      |...+..  ||.++.....+.|.  +|+.+|++++||||+++++++.... ..++||||+++|+|.+++.....   ..+
T Consensus       212 ~~~~~~~vavK~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~---~~~  286 (450)
T 1k9a_A          212 GDYRGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVL  286 (450)
T ss_dssp             EEETTEEEEEEEESSCTTSHHHH--HHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCT---TTC
T ss_pred             EEecCCeEEEEEeCCchHHHHHH--HHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCC---CCC
Confidence            4445444  99998776667788  9999999999999999999987765 78999999999999999975432   146


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ++..+..++.|++.||+|||   +++++||||||+||+++.++.+                  .+++.|+|||.+.+..+
T Consensus       287 ~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~  363 (450)
T 1k9a_A          287 GGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF  363 (450)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCC
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCC
Confidence            88899999999999999999   8999999999999999877643                  35678999999999899


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++||||||+++|||+| |+.|
T Consensus       364 ~~~sDvwslG~~l~el~t~g~~P  386 (450)
T 1k9a_A          364 STKSDVWSFGILLWEIYSFGRVP  386 (450)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999998 8876

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=2.1e-31  Score=226.60  Aligned_cols=146  Identities=18%  Similarity=0.264  Sum_probs=127.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++.....   ..+++..+.
T Consensus        57 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~  131 (389)
T 3gni_B           57 VRRINLEACSNEMVTFLQ--GELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFM---DGMNELAIA  131 (389)
T ss_dssp             EEEEEGGGSCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCT---TCCCHHHHH
T ss_pred             EEEecccccChHHHHHHH--HHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcc---cCCCHHHHH
Confidence            8888755433    3455  899999999999999999999999999999999999999999975421   258899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------------ecccCcccccccc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------------~g~~~y~aPE~~~  201 (227)
                      .++.|++.||+|||   +.+|+||||||+||+++.++.+                            +||+.|+|||++.
T Consensus       132 ~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  208 (389)
T 3gni_B          132 YILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQ  208 (389)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHS
T ss_pred             HHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHh
Confidence            99999999999999   8999999999999999876532                            4677799999998


Q ss_pred             C--CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 T--GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~--~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +  ..++.++||||+||++|||++|+.|
T Consensus       209 ~~~~~~~~~~DiwslG~il~el~~g~~p  236 (389)
T 3gni_B          209 QNLQGYDAKSDIYSVGITACELANGHVP  236 (389)
T ss_dssp             TTSSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            7  5689999999999999999999987

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=1.6e-31  Score=224.41  Aligned_cols=144  Identities=22%  Similarity=0.361  Sum_probs=128.3

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++.....     +.+.  +|+.++.++ +||||+++++++...+..|+||||+++|+|.+++....     .+++..
T Consensus        39 iK~~~~~~~~~~~~~~~~~--~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~l~~~~  111 (345)
T 3a8x_A           39 MKVVKKELVNDDEDIDWVQ--TEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEH  111 (345)
T ss_dssp             EEEEEGGGSCSHHHHHHHH--HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEEhHHhcchHHHHHHH--HHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHH
Confidence            8888754322     2355  899999988 89999999999999999999999999999999997543     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       112 ~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  188 (345)
T 3a8x_A          112 ARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYG  188 (345)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCC
Confidence            9999999999999999   8999999999999999876533                     588999999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|||++|+.|
T Consensus       189 ~~~DiwslG~il~ell~g~~p  209 (345)
T 3a8x_A          189 FSVDWWALGVLMFEMMAGRSP  209 (345)
T ss_dssp             THHHHHHHHHHHHHHHHSSCT
T ss_pred             hHHhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999987

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=1.3e-31  Score=229.71  Aligned_cols=143  Identities=18%  Similarity=0.312  Sum_probs=125.9

Q ss_pred             eEEEcCC-----CCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDN-----LNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++..     ...+.+.  +|+.+++.++||||++++++|.+++..|+||||+++|+|.+++...      .+++..+
T Consensus        99 iK~~~k~~~~~~~~~~~~~--~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~------~~~e~~~  170 (410)
T 3v8s_A           99 MKLLSKFEMIKRSDSAFFW--EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY------DVPEKWA  170 (410)
T ss_dssp             EEEEEHHHHHHTCCCSTHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHC------CCCHHHH
T ss_pred             EEEEehhhhhhhHHHHHHH--HHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcC------CCCHHHH
Confidence            7877542     1224466  9999999999999999999999999999999999999999998643      5788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCC--
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGN--  204 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~--  204 (227)
                      ..++.|++.||+|||   +.+|+||||||+||+++.++.+                      +||+.|+|||++....  
T Consensus       171 ~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~  247 (410)
T 3v8s_A          171 RFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGD  247 (410)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCC
Confidence            999999999999999   8999999999999999876532                      5899999999997654  


Q ss_pred             --CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 --CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 --~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        ++.++|+|||||++|||++|++|
T Consensus       248 ~~~~~~~DiwSlGvilyell~G~~P  272 (410)
T 3v8s_A          248 GYYGRECDWWSVGVFLYEMLVGDTP  272 (410)
T ss_dssp             CEEETHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCCCcceEecchHHHHHHHhCCCC
Confidence              78899999999999999999987

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=2e-31  Score=221.84  Aligned_cols=145  Identities=22%  Similarity=0.400  Sum_probs=127.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   +.|.  +|+.++++++||||+++++++..++..++||||+++|+|.+++.....    .+++..+..
T Consensus        82 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~  155 (325)
T 3kul_A           82 IKALKAGYTERQRRDFL--SEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDG----QFTIMQLVG  155 (325)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTT----CSCHHHHHH
T ss_pred             EEecCCCCCHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhccc----CCCHHHHHH
Confidence            8888765433   3566  999999999999999999999999999999999999999999976542    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                        .+|+.|+|||++.+..++
T Consensus       156 i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  232 (325)
T 3kul_A          156 MLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS  232 (325)
T ss_dssp             HHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCC
Confidence            9999999999999   8999999999999999876543                        235579999999888899


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++||||||+++|||++ |..|
T Consensus       233 ~~~Di~slG~il~ell~~g~~p  254 (325)
T 3kul_A          233 SASDVWSFGVVMWEVLAYGERP  254 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cHHHHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999 8876

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=1.1e-31  Score=225.72  Aligned_cols=144  Identities=22%  Similarity=0.323  Sum_probs=129.0

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.+|++++||||+++++++.+.+..|+||||+++|+|.+++....     .+++..+
T Consensus        71 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~  143 (350)
T 1rdq_E           71 MKILDKQKVVKLKQIEHTL--NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-----RFSEPHA  143 (350)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-----CCCHHHH
T ss_pred             EEEEEhHHhccHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcC-----CCCHHHH
Confidence            88875432     113555  89999999999999999999999999999999999999999997543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||.|||   +++|+||||||+||+++.++.+                  +||+.|+|||++.+..++.++|
T Consensus       144 ~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  220 (350)
T 1rdq_E          144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCC
Confidence            999999999999999   9999999999999999876643                  6899999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      +|||||++|||++|+.|
T Consensus       221 iwslG~il~ell~g~~P  237 (350)
T 1rdq_E          221 WWALGVLIYEMAAGYPP  237 (350)
T ss_dssp             HHHHHHHHHHHHHSSCS
T ss_pred             EecccHhHhHHhhCCCC
Confidence            99999999999999987

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=3.8e-31  Score=220.24  Aligned_cols=144  Identities=18%  Similarity=0.260  Sum_probs=130.4

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+......+.+.  +|+.+++++ +||||+++++++..++..++||||+ +++|.+++.....    .+++..+..++
T Consensus        39 vK~~~~~~~~~~~~--~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~i~  111 (330)
T 2izr_A           39 IKLEPMKSRAPQLH--LEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDR----TFSLKTVLMIA  111 (330)
T ss_dssp             EEEEETTCSSCCHH--HHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT----CCCHHHHHHHH
T ss_pred             EEEeccccchHHHH--HHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCC----CCCHHHHHHHH
Confidence            89887766667788  999999999 9999999999999999999999999 8999999975432    68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----e----------------------------ecccCcccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----L----------------------------IGTFGFIAPEC  199 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----~----------------------------~g~~~y~aPE~  199 (227)
                      .|++.||+|||   +.+++||||||+||+++.++.     +                            .||+.|+|||+
T Consensus       112 ~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  188 (330)
T 2izr_A          112 IQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINT  188 (330)
T ss_dssp             HHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHH
Confidence            99999999999   899999999999999986543     1                            47889999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.+..++.++|||||||++|||++|+.|
T Consensus       189 ~~~~~~~~~~Di~slG~il~ell~g~~P  216 (330)
T 2izr_A          189 HLGKEQSRRDDLEALGHMFMYFLRGSLP  216 (330)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             HcCCCCCchhHHHHHHHHHHHHhcCCCC
Confidence            9998999999999999999999999987

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=2.8e-31  Score=221.06  Aligned_cols=144  Identities=23%  Similarity=0.368  Sum_probs=124.8

Q ss_pred             eEEEcCCCC------cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLN------TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++....      ...+.  +|+.+|++++||||+++++++..++..++||||+++++|.+++....     .+++..
T Consensus        50 iK~~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~  122 (327)
T 3a62_A           50 MKVLKKAMIVRNAKDTAHTK--AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG-----IFMEDT  122 (327)
T ss_dssp             EEEECCC----------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHS-----SCCHHH
T ss_pred             EEEEEHHHhhhhhhHHHHHH--HHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCC-----CCCHHH
Confidence            888875431      13455  89999999999999999999999999999999999999999997543     688899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +.+++||||||+||+++.++.+                     +||+.|+|||.+.+..++
T Consensus       123 ~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  199 (327)
T 3a62_A          123 ACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHN  199 (327)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCC
T ss_pred             HHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCC
Confidence            9999999999999999   8999999999999999876533                     478999999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||||+++|+|++|+.|
T Consensus       200 ~~~DiwslG~il~el~~g~~p  220 (327)
T 3a62_A          200 RAVDWWSLGALMYDMLTGAPP  220 (327)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             CcccchhHHHHHHHHHHCCCC
Confidence            999999999999999999987

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=1.5e-31  Score=224.63  Aligned_cols=144  Identities=26%  Similarity=0.371  Sum_probs=127.5

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++...     ..+.+.  +|..++..+ +||||+++++++...+..|+||||+++|+|.+++....     .+++..
T Consensus        47 iK~~~~~~~~~~~~~~~~~--~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~~~~  119 (345)
T 1xjd_A           47 IKALKKDVVLMDDDVECTM--VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSR  119 (345)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEEhHHhhhhhhHHHHH--HHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHH
Confidence            88886532     123455  899988877 99999999999999999999999999999999997543     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +++++||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       120 ~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  196 (345)
T 1xjd_A          120 ATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYN  196 (345)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCC
Confidence            9999999999999999   8999999999999999876533                     588999999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|||++|+.|
T Consensus       197 ~~~DiwslG~il~ell~g~~P  217 (345)
T 1xjd_A          197 HSVDWWSFGVLLYEMLIGQSP  217 (345)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             ChhhhHHHHHHHHHHhcCCCC
Confidence            999999999999999999987

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.97  E-value=2.9e-31  Score=224.72  Aligned_cols=149  Identities=22%  Similarity=0.429  Sum_probs=127.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||.++.....   +.+.  +|+.+++++ +||||++++++|...+..++||||+++|+|.+++......           
T Consensus       118 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  195 (370)
T 2psq_A          118 VKMLKDDATEKDLSDLV--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV  195 (370)
T ss_dssp             EEECCTTCBHHHHHHHH--HHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------
T ss_pred             EEEecCCcCHHHHHHHH--HHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccccccc
Confidence            7777655433   3456  999999999 8999999999999999999999999999999999754311           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||.|||   +++++||||||+||+++.++.+                       .+|+.|+
T Consensus       196 ~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~  272 (370)
T 2psq_A          196 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM  272 (370)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGC
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceE
Confidence            1125788999999999999999999   8999999999999999876643                       2456799


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||++.+..++.++|||||||++|||++ |+.|
T Consensus       273 aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p  305 (370)
T 2psq_A          273 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP  305 (370)
T ss_dssp             CHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence            9999998899999999999999999999 8765

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=3.2e-31  Score=229.46  Aligned_cols=144  Identities=20%  Similarity=0.306  Sum_probs=128.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      +|.+......    +.+.  +|+.++++++||||+++++++.+++..++||||+++|+|.+.+....     .+++..+.
T Consensus        41 ~K~i~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~-----~~~e~~~~  113 (444)
T 3soa_A           41 AMIINTKKLSARDHQKLE--REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE-----YYSEADAS  113 (444)
T ss_dssp             EEEEESCSCHHHHHHHHH--HHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCS-----CCCHHHHH
T ss_pred             EEEEEcccCCHHHHHHHH--HHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcC-----CCCHHHHH
Confidence            7887765433    3456  99999999999999999999999999999999999999999987654     68999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC---Cc---------------------eecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN---DK---------------------LIGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~---~~---------------------~~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||.|||   +.+|+||||||+||+++.+   +.                     ..||+.|+|||++.+..+
T Consensus       114 ~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~  190 (444)
T 3soa_A          114 HCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY  190 (444)
T ss_dssp             HHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCB
T ss_pred             HHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCC
Confidence            99999999999999   8999999999999999842   21                     258899999999998889


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||+||++|+|++|.+|
T Consensus       191 ~~~~DIwSlGvilyell~G~~P  212 (444)
T 3soa_A          191 GKPVDLWACGVILYILLVGYPP  212 (444)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCccccHHHHHHHHHHHhCCCC
Confidence            9999999999999999999987

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=3.1e-31  Score=220.55  Aligned_cols=144  Identities=28%  Similarity=0.433  Sum_probs=126.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++....     .+++..+..
T Consensus        37 vK~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~  109 (323)
T 3tki_A           37 VKIVDMKRAVDCPENIK--KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQR  109 (323)
T ss_dssp             EEEEECC-------CHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTT-----BCCHHHHHH
T ss_pred             EEEEEcccccchHHHHH--HHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcC-----CCCHHHHHH
Confidence            8887654332   4566  99999999999999999999999999999999999999999997654     689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCC-C
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNC-N  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~-~  206 (227)
                      ++.|++.||+|||   +.+++||||||+||+++.++.+                       +||+.|+|||++.+..+ +
T Consensus       110 i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  186 (323)
T 3tki_A          110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA  186 (323)
T ss_dssp             HHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCH
T ss_pred             HHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCC
Confidence            9999999999999   8999999999999999875432                       57889999999987765 7


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+||++|+|++|+.|
T Consensus       187 ~~~DiwslG~il~~ll~g~~p  207 (323)
T 3tki_A          187 EPVDVWSCGIVLTAMLAGELP  207 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcccHHHHHHHHHHHHhCCCC
Confidence            789999999999999999987

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=3e-31  Score=224.82  Aligned_cols=145  Identities=21%  Similarity=0.380  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   ++|.  +|+.++++++||||+++++++..++..++||||+++|+|.+++.....    .+++..+..
T Consensus        78 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~~~~~~  151 (373)
T 2qol_A           78 IKTLKVGYTEKQRRDFL--GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA----QFTVIQLVG  151 (373)
T ss_dssp             EEECCTTCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTT----CSCHHHHHH
T ss_pred             EEEecCccCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCC----CCCHHHHHH
Confidence            8887654333   4566  999999999999999999999999999999999999999999986542    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                        .+++.|+|||++.+..++
T Consensus       152 i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  228 (373)
T 2qol_A          152 MLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT  228 (373)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcC
Confidence            9999999999999   8999999999999999877543                        134579999999988999


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++||||||+++|||++ |+.|
T Consensus       229 ~~~Dv~SlG~il~ellt~g~~P  250 (373)
T 2qol_A          229 SASDVWSYGIVLWEVMSYGERP  250 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-CT
T ss_pred             chhcHHHHHHHHHHHHhCCCCC
Confidence            99999999999999998 8876

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=4.7e-31  Score=224.74  Aligned_cols=145  Identities=21%  Similarity=0.283  Sum_probs=127.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  ..+.  +|+.+|++++||||+++++++..++..++||||+++|+|.+++.....    .+++..+..+
T Consensus        81 ~K~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~----~l~~~~~~~i  154 (387)
T 1kob_A           81 AKFINTPYPLDKYTVK--NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY----KMSEAEVINY  154 (387)
T ss_dssp             EEEEECCSHHHHHHHH--HHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC----CBCHHHHHHH
T ss_pred             EEEecccchhhHHHHH--HHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcC----CCCHHHHHHH
Confidence            7777654333  3455  999999999999999999999999999999999999999999976532    6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC--Cce--------------------ecccCccccccccCCCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN--DKL--------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~--~~~--------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      +.|++.||.|||   +.+++||||||+||+++.+  +.+                    .||+.|+|||++.+..++.++
T Consensus       155 ~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  231 (387)
T 1kob_A          155 MRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYT  231 (387)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHH
T ss_pred             HHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcc
Confidence            999999999999   8999999999999999743  211                    588999999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |||||||++|+|++|..|
T Consensus       232 DiwSlG~il~elltg~~P  249 (387)
T 1kob_A          232 DMWAIGVLGYVLLSGLSP  249 (387)
T ss_dssp             HHHHHHHHHHHHHHSCCS
T ss_pred             cEeeHhHHHHHHHhCCCC
Confidence            999999999999999987

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=7.9e-32  Score=226.91  Aligned_cols=144  Identities=24%  Similarity=0.356  Sum_probs=127.3

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++...     ..+.+.  +|..++..+ +||||+++++++...+..|+||||+++|+|.+++....     .+++..
T Consensus        53 vK~~~~~~~~~~~~~~~~~--~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~~~~  125 (353)
T 3txo_A           53 VKVLKKDVILQDDDVECTM--TEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR-----RFDEAR  125 (353)
T ss_dssp             EEEEEHHHHHHHTTHHHHH--HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEEHHHhcchhHHHHHH--HHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHH
Confidence            88886432     113445  899999988 79999999999999999999999999999999997543     689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       126 ~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  202 (353)
T 3txo_A          126 ARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYG  202 (353)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCT
T ss_pred             HHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcC
Confidence            9999999999999999   8999999999999999876543                     589999999999888899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|||++|+.|
T Consensus       203 ~~~DiwslG~il~ell~G~~P  223 (353)
T 3txo_A          203 PAVDWWAMGVLLYEMLCGHAP  223 (353)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             CccCCCcchHHHHHHHhCCCC
Confidence            999999999999999999987

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=3e-31  Score=224.87  Aligned_cols=145  Identities=25%  Similarity=0.339  Sum_probs=127.6

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.++.....  +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....    ..+++..+..+
T Consensus       119 vK~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~----~~l~~~~~~~i  192 (373)
T 2x4f_A          119 AKIIKTRGMKDKEEVK--NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDES----YNLTELDTILF  192 (373)
T ss_dssp             EEEEECCSHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTG----GGCCHHHHHHH
T ss_pred             EEEEcccccccHHHHH--HHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcC----CCCCHHHHHHH
Confidence            8888765433  4666  99999999999999999999999999999999999999999886543    26889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeec--CCCce--------------------ecccCccccccccCCCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN--DNDKL--------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~--~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      +.|++.||.|||   +.+++||||||+||+++  .++.+                    +||+.|+|||++....++.++
T Consensus       193 ~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  269 (373)
T 2x4f_A          193 MKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPT  269 (373)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHH
T ss_pred             HHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHH
Confidence            999999999999   89999999999999983  33221                    488999999999888899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |||||||++|||++|+.|
T Consensus       270 DiwslG~il~elltg~~p  287 (373)
T 2x4f_A          270 DMWSVGVIAYMLLSGLSP  287 (373)
T ss_dssp             HHHHHHHHHHHHHHSSCT
T ss_pred             hHHHHHHHHHHHHhCCCC
Confidence            999999999999999987

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=3.5e-31  Score=223.49  Aligned_cols=144  Identities=26%  Similarity=0.376  Sum_probs=125.8

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +.+.  +|+.++++++||||+++++++...+..++||||+++|+|.+++....     .+++..+..++
T Consensus        50 vK~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~  122 (361)
T 3uc3_A           50 VKYIERGAAIDENVQ--REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG-----RFSEDEARFFF  122 (361)
T ss_dssp             EEEEESSTTSCHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-----SCCHHHHHHHH
T ss_pred             EEEEecCccccHHHH--HHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcC-----CCCHHHHHHHH
Confidence            8888765433 5666  99999999999999999999999999999999999999999987543     68899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc--e--------------------ecccCccccccccCCCCCch-h
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK--L--------------------IGTFGFIAPECITTGNCNEK-S  209 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~--~--------------------~g~~~y~aPE~~~~~~~~~~-~  209 (227)
                      .|++.||.|||   +++++||||||+||+++.++.  +                    +||+.|+|||++.+..++.+ +
T Consensus       123 ~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  199 (361)
T 3uc3_A          123 QQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIA  199 (361)
T ss_dssp             HHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHH
T ss_pred             HHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCee
Confidence            99999999999   899999999999999976543  1                    58899999999988877665 8


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||+||++|+|++|+.|
T Consensus       200 DiwslG~il~ell~g~~P  217 (361)
T 3uc3_A          200 DVWSCGVTLYVMLVGAYP  217 (361)
T ss_dssp             HHHHHHHHHHHHHHSSCS
T ss_pred             eeehhHHHHHHHHhCCCC
Confidence            999999999999999987

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.97  E-value=6.8e-32  Score=224.20  Aligned_cols=157  Identities=24%  Similarity=0.299  Sum_probs=128.3

Q ss_pred             cCCCCCC-eeecCCC--eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCc----ceeEeecccCCChhhh
Q 040292           60 NNYDPGK-GFLQDHP--ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEV----PILVFEFVACGTLADR  131 (227)
Q Consensus        60 ~~f~~~~-~~~~~~~--vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~----~~lV~E~~~~gsL~~~  131 (227)
                      ++|+.+. +...+..  ||.+...... ..+.  +|+.++++++||||+++++++.....    .++||||+++|+|.++
T Consensus        35 G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~  112 (322)
T 3soc_A           35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNE--YEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDF  112 (322)
T ss_dssp             STTCEEEEEEETTEEEEEEEECGGGHHHHHHH--HHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH
T ss_pred             cCceEEEEEEECCCEEEEEEeecCchHHHHHH--HHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHH
Confidence            3344433 5545444  8888654332 2344  79999999999999999999987553    6999999999999999


Q ss_pred             hcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCC----------CeEEecCCCCceeecCCCce-------------
Q 040292          132 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSR----------PIVFRDIKPFTTHVNDNDKL-------------  188 (227)
Q Consensus       132 l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~----------~i~H~dlkp~nil~~~~~~~-------------  188 (227)
                      +...      .+++..+..++.|++.||.|||   +.          +++||||||+||+++.++.+             
T Consensus       113 l~~~------~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~  183 (322)
T 3soc_A          113 LKAN------VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA  183 (322)
T ss_dssp             HHHC------CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECT
T ss_pred             HHhc------CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccccc
Confidence            9753      5889999999999999999999   88          99999999999999876432             


Q ss_pred             ----------ecccCccccccccCC-----CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ----------IGTFGFIAPECITTG-----NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ----------~g~~~y~aPE~~~~~-----~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                .||+.|+|||++.+.     .++.++|||||||++|||+||+.|
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~p  237 (322)
T 3soc_A          184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA  237 (322)
T ss_dssp             TSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTT
T ss_pred             ccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCC
Confidence                      578899999999763     345688999999999999999765

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=2.3e-31  Score=219.66  Aligned_cols=155  Identities=26%  Similarity=0.474  Sum_probs=129.5

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      +...+..  ||.+......+.|.  +|+.++++++||||+++++++.  +..++||||+++|+|.+++.....  ...++
T Consensus        27 ~~~~~~~vavK~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~  100 (307)
T 2eva_A           27 AKWRAKDVAIKQIESESERKAFI--VELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEP--LPYYT  100 (307)
T ss_dssp             EEETTEEEEEEECSSTTHHHHHH--HHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSS--EECCC
T ss_pred             EEECCeeEEEEEecChhHHHHHH--HHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCC--CCccC
Confidence            4444444  88887655456777  9999999999999999999886  458999999999999999986432  12468


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCC
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~  205 (227)
                      +..+..++.|+++||.|||....++++||||||+||+++.++..                   .||+.|+|||.+.+..+
T Consensus       101 ~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  180 (307)
T 2eva_A          101 AAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNY  180 (307)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTSSCHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCceEChhhhCCCCC
Confidence            88999999999999999993211899999999999999876541                   47889999999998889


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||||+++|||++|+.|
T Consensus       181 ~~~~Di~slG~il~el~~g~~p  202 (307)
T 2eva_A          181 SEKCDVFSWGIILWEVITRRKP  202 (307)
T ss_dssp             CTHHHHHHHHHHHHHHHHTCCT
T ss_pred             CcHHHHHHHHHHHHHHHHCCCC
Confidence            9999999999999999999976

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=1.6e-31  Score=224.64  Aligned_cols=148  Identities=22%  Similarity=0.331  Sum_probs=126.5

Q ss_pred             eEEEcCCC-------CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNL-------NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~-------~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.+....       ..+.+.  +|+.++++++||||+++++++..++..++||||+++++|.+.+....... ..+++.
T Consensus        54 vK~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~-~~~~~~  130 (351)
T 3c0i_A           54 VKIVDVAKFTSSPGLSTEDLK--REASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAG-FVYSEA  130 (351)
T ss_dssp             EEEEEHHHHHTSSSCCHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTT-CCCCHH
T ss_pred             EEEEEhhhccccccchHHHHH--HHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccC-CCCCHH
Confidence            88875321       124566  99999999999999999999999999999999999999988775422111 157899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc------------------------eecccCccccccccC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------LIGTFGFIAPECITT  202 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~------------------------~~g~~~y~aPE~~~~  202 (227)
                      .+..++.|++.||.|||   +++++||||||+||+++.++.                        .+||+.|+|||++.+
T Consensus       131 ~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (351)
T 3c0i_A          131 VASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR  207 (351)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcC
Confidence            99999999999999999   899999999999999975432                        158899999999998


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..++.++||||+||++|+|++|+.|
T Consensus       208 ~~~~~~~DiwslG~il~~ll~g~~p  232 (351)
T 3c0i_A          208 EPYGKPVDVWGCGVILFILLSGCLP  232 (351)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCchHhhHHHHHHHHHHHHCCCC
Confidence            8899999999999999999999887

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=2.4e-31  Score=217.01  Aligned_cols=144  Identities=24%  Similarity=0.451  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++....    ..+++..+..+
T Consensus        45 ~K~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i  118 (289)
T 4fvq_A           45 LKVLDKAHRNYSESFF--EAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK----NCINILWKLEV  118 (289)
T ss_dssp             EEEECGGGGGGHHHHH--HHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTG----GGCCHHHHHHH
T ss_pred             hhhcccccHHHHHHHH--HHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCC----CCCCHHHHHHH
Confidence            7777554333  4566  99999999999999999999999999999999999999999997643    25889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc--------e-----------------ecccCccccccccC-CCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK--------L-----------------IGTFGFIAPECITT-GNC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~--------~-----------------~g~~~y~aPE~~~~-~~~  205 (227)
                      +.|++.||.|||   +++++||||||+||+++.++.        +                 .|++.|+|||.+.+ ..+
T Consensus       119 ~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  195 (289)
T 4fvq_A          119 AKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNL  195 (289)
T ss_dssp             HHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGC
T ss_pred             HHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCC
Confidence            999999999999   899999999999999987654        2                 37788999999987 668


Q ss_pred             CchhhHHHHHHHHHHHHhCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~  226 (227)
                      +.++||||||+++|||++|..
T Consensus       196 ~~~~DiwslG~il~el~~g~~  216 (289)
T 4fvq_A          196 NLATDKWSFGTTLWEICSGGD  216 (289)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTC
T ss_pred             CchhHHHHHHHHHHHHHcCCC
Confidence            999999999999999999654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=1.9e-31  Score=226.23  Aligned_cols=145  Identities=25%  Similarity=0.436  Sum_probs=127.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   ++|.  +|+.+|++++||||++++++|..++..++||||+++|+|.+++....    ..+++..+..
T Consensus       144 vK~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~  217 (377)
T 3cbl_A          144 VKSCRETLPPDLKAKFL--QEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG----ARLRVKTLLQ  217 (377)
T ss_dssp             EEECCTTSCHHHHTTTT--HHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHG----GGCCHHHHHH
T ss_pred             EEEccccCCHHHHHHHH--HHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcC----CCCCHHHHHH
Confidence            8887755333   4666  99999999999999999999999999999999999999999997543    2588999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||+|||   +++++||||||+||+++.++.+                       .+++.|+|||.+....++.
T Consensus       218 ~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  294 (377)
T 3cbl_A          218 MVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS  294 (377)
T ss_dssp             HHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEH
T ss_pred             HHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCc
Confidence            9999999999999   8999999999999999876543                       1355699999998888999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|||||||++|||+| |..|
T Consensus       295 ~~DvwslG~il~el~t~g~~p  315 (377)
T 3cbl_A          295 ESDVWSFGILLWETFSLGASP  315 (377)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCS
T ss_pred             hhhHHHHHHHHHHHHhCCCCC
Confidence            9999999999999998 8766

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=1.5e-30  Score=217.51  Aligned_cols=144  Identities=22%  Similarity=0.252  Sum_probs=128.1

Q ss_pred             eEEEcCCCC----------cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCC-ChhhhhcCCCCCCCcc
Q 040292           74 ISEFGDNLN----------TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACG-TLADRIHDPNGSQLEP  142 (227)
Q Consensus        74 vK~~~~~~~----------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~  142 (227)
                      ||.+.....          .+.+.  +|+.++++++||||+++++++...+..++||||+.+| +|.+++....     .
T Consensus        54 vK~~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~-----~  126 (335)
T 3dls_A           54 VKFIKKEKVLEDCWIEDPKLGKVT--LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP-----R  126 (335)
T ss_dssp             EEEEESTTSCTTSEEEETTTEEEE--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCC-----C
T ss_pred             EEEEehhhcccccccchHHHHHHH--HHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcC-----C
Confidence            888876542          23566  9999999999999999999999999999999999777 9999998654     6


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT  202 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~  202 (227)
                      +++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                    .||+.|+|||++.+
T Consensus       127 l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  203 (335)
T 3dls_A          127 LDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG  203 (335)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccccChhhhcC
Confidence            899999999999999999999   8999999999999999876543                    48899999999988


Q ss_pred             CCC-CchhhHHHHHHHHHHHHhCCCC
Q 040292          203 GNC-NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ~~~-~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..+ +.++|||||||++|+|++|+.|
T Consensus       204 ~~~~~~~~DiwslG~il~el~~g~~p  229 (335)
T 3dls_A          204 NPYRGPELEMWSLGVTLYTLVFEENP  229 (335)
T ss_dssp             CCBCSHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCCCcccchhHHHHHHHHHhCCCc
Confidence            776 8899999999999999999987

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=229.42  Aligned_cols=145  Identities=18%  Similarity=0.227  Sum_probs=126.9

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++....     .+.+.  +|+.++.+++||||+++++++.+.+..|+||||+++|+|.+++...+.    .+++..+
T Consensus        91 iK~l~k~~~~~~~~~~~~~--~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~----~l~~~~~  164 (412)
T 2vd5_A           91 MKIMNKWDMLKRGEVSCFR--EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE----RIPAEMA  164 (412)
T ss_dssp             EEEEEHHHHHHHGGGCCHH--HHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSS----CCCHHHH
T ss_pred             EEEEeHHHhhhHHHHHHHH--HHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCC----CCCHHHH
Confidence            888864321     13456  899999999999999999999999999999999999999999975431    6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCcccccccc-----
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECIT-----  201 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~-----  201 (227)
                      ..++.|++.||+|||   +++|+||||||+||+++.++.+                      +||+.|+|||++.     
T Consensus       165 ~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~  241 (412)
T 2vd5_A          165 RFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG  241 (412)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccC
Confidence            999999999999999   8999999999999999876532                      6899999999997     


Q ss_pred             --CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 --TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 --~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        ...++.++|+|||||++|||++|+.|
T Consensus       242 ~~~~~~~~~~DiwSlGvilyelltG~~P  269 (412)
T 2vd5_A          242 PGTGSYGPECDWWALGVFAYEMFYGQTP  269 (412)
T ss_dssp             TTCSEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCCCCChHHhhhHHhHHHHHHHhCCCC
Confidence              34689999999999999999999987

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=3.3e-31  Score=224.65  Aligned_cols=144  Identities=23%  Similarity=0.348  Sum_probs=121.7

Q ss_pred             eEEEcCCCCc-----ccccchhHHHH-HhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAF-ASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~-l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++.....     ..+.  +|..+ ++.++||||+++++++...+..|+||||+++|+|.+++....     .+++..
T Consensus        68 iK~~~~~~~~~~~~~~~~~--~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~~~~  140 (373)
T 2r5t_A           68 VKVLQKKAILKKKEEKHIM--SERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-----CFLEPR  140 (373)
T ss_dssp             EEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEEHHHhhhhHHHHHHH--HHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHH
Confidence            8888654321     2334  77776 577899999999999999999999999999999999997543     688899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       141 ~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  217 (373)
T 2r5t_A          141 ARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYD  217 (373)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCC
Confidence            9999999999999999   8999999999999999876533                     589999999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|||++|..|
T Consensus       218 ~~~DiwslG~il~ell~G~~P  238 (373)
T 2r5t_A          218 RTVDWWCLGAVLYEMLYGLPP  238 (373)
T ss_dssp             THHHHHHHHHHHHHHHHSSCT
T ss_pred             chhhhHHHHHHHHHHHcCCCC
Confidence            999999999999999999987

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=9.4e-31  Score=216.42  Aligned_cols=144  Identities=21%  Similarity=0.344  Sum_probs=123.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++..++..++||||++ ++|.+++.....    .+++..+.
T Consensus        50 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~  122 (311)
T 3niz_A           50 LKRIRLDAEDEGIPSTAI--REISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKT----GLQDSQIK  122 (311)
T ss_dssp             EEEEC------CHHHHHH--HHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHHHHHTCTT----CCCHHHHH
T ss_pred             EEEEecccccchhhHHHH--HHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHHHHHhccC----CCCHHHHH
Confidence            8888654333    3455  99999999999999999999999999999999998 588888876442    68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~  207 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||++.+ ..++.
T Consensus       123 ~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  199 (311)
T 3niz_A          123 IYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST  199 (311)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCT
T ss_pred             HHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCc
Confidence            99999999999999   8999999999999999876543                     47888999999876 45899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|++|+.|
T Consensus       200 ~~DiwslG~il~~ll~g~~p  219 (311)
T 3niz_A          200 SVDIWSIGCIFAEMITGKPL  219 (311)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             hHHhHHHHHHHHHHHhCCCC
Confidence            99999999999999999976

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.97  E-value=4.7e-31  Score=214.76  Aligned_cols=145  Identities=22%  Similarity=0.444  Sum_probs=129.3

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +++.  +|+.++.+++||||+++++++...+..++||||+++++|.+++....    ..+++..+..++
T Consensus        53 vK~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~  126 (283)
T 3gen_A           53 IKMIKEGSMSEDEFI--EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR----HRFQTQQLLEMC  126 (283)
T ss_dssp             EEEECTTSBCHHHHH--HHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGG----GCCCHHHHHHHH
T ss_pred             EEEecCCCCCHHHHH--HHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhc----cCCCHHHHHHHH
Confidence            8888765443 5677  99999999999999999999999999999999999999999997633    268899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||+++.++.+                      .+|+.|+|||.+.+..++.++|
T Consensus       127 ~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (283)
T 3gen_A          127 KDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD  203 (283)
T ss_dssp             HHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhh
Confidence            99999999999   8999999999999999887643                      2456799999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      |||+|+++|+|+| |+.|
T Consensus       204 v~slG~~l~~l~t~g~~p  221 (283)
T 3gen_A          204 IWAFGVLMWEIYSLGKMP  221 (283)
T ss_dssp             HHHHHHHHHHHHTTTCCT
T ss_pred             HHHHHHHHHHHHhCCCCC
Confidence            9999999999998 8776

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=3.6e-31  Score=232.10  Aligned_cols=146  Identities=25%  Similarity=0.430  Sum_probs=128.2

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.++..... ++|.  +|+.+|++++||||++++++|...+..++||||+++|+|.+++.....   ..+++..+..++
T Consensus       250 vK~~~~~~~~~~~~~--~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~---~~~~~~~~~~i~  324 (495)
T 1opk_A          250 VKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMA  324 (495)
T ss_dssp             EEECCSSSSCHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCT---TTSCHHHHHHHH
T ss_pred             EEEecCcccchHHHH--HHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCc---CCCCHHHHHHHH
Confidence            8888765443 5677  999999999999999999999999999999999999999999975332   258889999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||+|||   +++++||||||+||+++.++.+                      .+++.|+|||++....++.++|
T Consensus       325 ~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  401 (495)
T 1opk_A          325 TQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD  401 (495)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHh
Confidence            99999999999   8999999999999999865433                      2456799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      ||||||++|||+| |..|
T Consensus       402 vwSlG~~l~el~t~g~~p  419 (495)
T 1opk_A          402 VWAFGVLLWEIATYGMSP  419 (495)
T ss_dssp             HHHHHHHHHHHHTTSCCS
T ss_pred             HHhHHHHHHHHHhCCCCC
Confidence            9999999999999 7765

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=1.8e-30  Score=215.30  Aligned_cols=147  Identities=26%  Similarity=0.388  Sum_probs=125.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCc-----------------------------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEV-----------------------------------  115 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-----------------------------------  115 (227)
                      ||.+......   +.+.  +|+.+|++++||||++++++|.+...                                   
T Consensus        36 vK~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (332)
T 3qd2_B           36 IKRIRLPNRELAREKVM--REVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIR  113 (332)
T ss_dssp             EEEEECCSTTTHHHHHH--HHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--------------------------
T ss_pred             EEEeecCCchhHHHHHH--HHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCccccccccee
Confidence            8988754433   4566  99999999999999999999876542                                   


Q ss_pred             ----------------------ceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEe
Q 040292          116 ----------------------PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFR  173 (227)
Q Consensus       116 ----------------------~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~  173 (227)
                                            .++||||+++++|.+++.....  .....+..+..++.|++.||.|||   +.+++||
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~  188 (332)
T 3qd2_B          114 RMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS--LEDREHGVCLHIFIQIAEAVEFLH---SKGLMHR  188 (332)
T ss_dssp             ------------------CCCEEEEEEECCCSSCHHHHHHTCCS--GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECC
T ss_pred             eccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC--ccchhhHHHHHHHHHHHHHHHHHH---hCCeeec
Confidence                                  7899999999999999986542  124566678999999999999999   8999999


Q ss_pred             cCCCCceeecCCCce---------------------------------ecccCccccccccCCCCCchhhHHHHHHHHHH
Q 040292          174 DIKPFTTHVNDNDKL---------------------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLE  220 (227)
Q Consensus       174 dlkp~nil~~~~~~~---------------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~e  220 (227)
                      ||||+||+++.++.+                                 .||+.|+|||.+.+..++.++||||||+++||
T Consensus       189 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e  268 (332)
T 3qd2_B          189 DLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE  268 (332)
T ss_dssp             CCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHH
T ss_pred             CCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHH
Confidence            999999999865432                                 38889999999998899999999999999999


Q ss_pred             HHhCCCC
Q 040292          221 LLTGKKG  227 (227)
Q Consensus       221 l~tg~~p  227 (227)
                      |++|..|
T Consensus       269 l~~~~~~  275 (332)
T 3qd2_B          269 LLYSFST  275 (332)
T ss_dssp             HHSCCCC
T ss_pred             HHHcCCC
Confidence            9999765

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=2.3e-31  Score=214.98  Aligned_cols=145  Identities=21%  Similarity=0.390  Sum_probs=128.4

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +++.  +|+.++.+++||||+++++++..++..++||||+++++|.+++....    ..+++..+..++
T Consensus        37 vK~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~i~  110 (268)
T 3sxs_A           37 VKMIKEGSMSEDEFF--QEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG----KGLEPSQLLEMC  110 (268)
T ss_dssp             EEEECBTTBCHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHG----GGCCHHHHHHHH
T ss_pred             EEEeccCCCcHHHHH--HHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcC----CCCCHHHHHHHH
Confidence            8888765443 5677  99999999999999999999999999999999999999999997543    258899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+.+..++.++|
T Consensus       111 ~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  187 (268)
T 3sxs_A          111 YDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD  187 (268)
T ss_dssp             HHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHH
T ss_pred             HHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhh
Confidence            99999999999   8999999999999999877643                      2445699999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      |||+|+++|+|++ |+.|
T Consensus       188 i~slG~il~~l~~~g~~p  205 (268)
T 3sxs_A          188 VWAFGILMWEVFSLGKMP  205 (268)
T ss_dssp             HHHHHHHHHHHHTTTCCT
T ss_pred             hHHHHHHHHHHHcCCCCC
Confidence            9999999999999 8876

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=5.9e-31  Score=221.56  Aligned_cols=144  Identities=24%  Similarity=0.365  Sum_probs=128.0

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++...     ..+.+.  +|..++..+ +||||+++++++...+..|+||||+++|+|.+++....     .+++..
T Consensus        50 iK~~~~~~~~~~~~~~~~~--~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~~~~~~  122 (353)
T 2i0e_A           50 VKILKKDVVIQDDDVECTM--VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-----RFKEPH  122 (353)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEEHHHhhcchHHHHHH--HHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHH
Confidence            88876432     113455  899999988 89999999999999999999999999999999997543     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||.|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       123 ~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  199 (353)
T 2i0e_A          123 AVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYG  199 (353)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBS
T ss_pred             HHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcC
Confidence            9999999999999999   8999999999999999876533                     588999999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|||++|++|
T Consensus       200 ~~~DiwslG~il~ell~G~~P  220 (353)
T 2i0e_A          200 KSVDWWAFGVLLYEMLAGQAP  220 (353)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             CcccccchHHHHHHHHcCCCC
Confidence            999999999999999999987

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=2.2e-31  Score=219.95  Aligned_cols=144  Identities=26%  Similarity=0.441  Sum_probs=125.9

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcc----eeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVP----ILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~----~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.+......     ..+.  +|+.++++++||||+++++++......    ++||||+++++|.+++....     +++
T Consensus        42 vK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----~~~  114 (311)
T 3ork_A           42 VKVLRADLARDPSFYLRFR--REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMT  114 (311)
T ss_dssp             EEEECTTTTTSHHHHHHHH--HHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-----SCC
T ss_pred             EEEeCccccCCHHHHHHHH--HHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-----CCC
Confidence            8888765433     2456  999999999999999999998876544    99999999999999997543     688


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECI  200 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~  200 (227)
                      +..+..++.|++.||.|||   +.+++||||||+||+++.++.+                        .||+.|+|||.+
T Consensus       115 ~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~  191 (311)
T 3ork_A          115 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA  191 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHh
Confidence            9999999999999999999   8999999999999999876543                        478999999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+..++.++||||||+++|+|++|+.|
T Consensus       192 ~~~~~~~~~Di~slG~~l~~ll~g~~p  218 (311)
T 3ork_A          192 RGDSVDARSDVYSLGCVLYEVLTGEPP  218 (311)
T ss_dssp             HTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            988999999999999999999999977

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=8.7e-31  Score=218.00  Aligned_cols=143  Identities=23%  Similarity=0.365  Sum_probs=113.8

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+... ....+.  +|+.++.++. ||||+++++++.++...++||||+++|+|.+++....     ++++..+..++
T Consensus        41 vK~~~~~-~~~~~~--~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~i~  112 (325)
T 3kn6_A           41 VKIISKR-MEANTQ--KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKK-----HFSETEASYIM  112 (325)
T ss_dssp             EEEEEGG-GHHHHH--HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCS-----CCCHHHHHHHH
T ss_pred             EEEEChh-hhhhHH--HHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcC-----CCCHHHHHHHH
Confidence            8888643 224555  8999999996 9999999999999999999999999999999997653     68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC---ce---------------------ecccCccccccccCCCCCch
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND---KL---------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~---~~---------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      .|++.||.|||   +++++||||||+||+++.++   .+                     +||+.|+|||.+.+..++.+
T Consensus       113 ~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  189 (325)
T 3kn6_A          113 RKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDES  189 (325)
T ss_dssp             HHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHH
T ss_pred             HHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCc
Confidence            99999999999   89999999999999997643   11                     46889999999998899999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+|+++|+|++|+.|
T Consensus       190 ~DiwslG~il~~ll~g~~p  208 (325)
T 3kn6_A          190 CDLWSLGVILYTMLSGQVP  208 (325)
T ss_dssp             HHHHHHHHHHHHHHHSSCT
T ss_pred             cchHHHHHHHHHHHhCCCC
Confidence            9999999999999999887

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=3.7e-31  Score=229.06  Aligned_cols=144  Identities=18%  Similarity=0.305  Sum_probs=121.9

Q ss_pred             eEEEcCCC---C--cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL---N--TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~---~--~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....   .  ...+.  +|+.++++++||||++++++|...+..++||||+++|+|.+++....     .+++..+
T Consensus       178 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~  250 (446)
T 4ejn_A          178 MKILKKEVIVAKDEVAHTL--TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER-----VFSEDRA  250 (446)
T ss_dssp             EEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHS-----CCCHHHH
T ss_pred             EEEEEhhhhhhhHHHHHHH--HHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcC-----CCCHHHH
Confidence            88876431   1  13455  89999999999999999999999999999999999999999987543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ..++.|++.||+|||   + .+|+||||||+||+++.++.+                     +||+.|+|||++.+..++
T Consensus       251 ~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  327 (446)
T 4ejn_A          251 RFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYG  327 (446)
T ss_dssp             HHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCC
T ss_pred             HHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCC
Confidence            999999999999999   7 899999999999999876533                     588999999999988999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|||||||++|||++|+.|
T Consensus       328 ~~~DiwslG~il~ell~g~~P  348 (446)
T 4ejn_A          328 RAVDWWGLGVVMYEMMCGRLP  348 (446)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             CccchhhhHHHHHHHhhCCCC
Confidence            999999999999999999987

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=7.3e-31  Score=231.85  Aligned_cols=148  Identities=18%  Similarity=0.296  Sum_probs=129.5

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.+|++++||||+++++++...+..|+||||++||+|.+++....... ..+++..+
T Consensus       215 iK~l~k~~~~~~~~~~~~~--~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~-~~l~e~~~  291 (543)
T 3c4z_A          215 CKKLNKKRLKKRKGYQGAM--VEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN-PGFQEPRA  291 (543)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTS-CSCCHHHH
T ss_pred             EEEEEhHHhhhhHHHHHHH--HHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhccc-ccccHHHH
Confidence            888754321     13455  89999999999999999999999999999999999999999987643211 26889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++.
T Consensus       292 ~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~  368 (543)
T 3c4z_A          292 IFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF  368 (543)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCT
T ss_pred             HHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCCh
Confidence            999999999999999   8999999999999999876532                     6899999999999988999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+|||||++|||++|++|
T Consensus       369 ~~DiwSlGvilyelltG~~P  388 (543)
T 3c4z_A          369 SVDYFALGVTLYEMIAARGP  388 (543)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             HHhcCcchHHHHHHHhCCCC
Confidence            99999999999999999987

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.97  E-value=3.7e-31  Score=229.64  Aligned_cols=145  Identities=24%  Similarity=0.394  Sum_probs=126.3

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.++..... +.|.  +|+.+|++++||||+++++++. .+..++||||+++|+|.+++.....   ..+++..+..++
T Consensus       217 vK~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~  290 (454)
T 1qcf_A          217 VKTMKPGSMSVEAFL--AEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEG---SKQPLPKLIDFS  290 (454)
T ss_dssp             EEEECTTSBCHHHHH--HHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHH---HTCCHHHHHHHH
T ss_pred             EEEecCCCccHHHHH--HHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccC---CCCCHHHHHHHH
Confidence            8888765433 5677  9999999999999999999986 6678999999999999999975321   147788899999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +++++||||||+||+++.++.+                      .+++.|+|||++....++.++|
T Consensus       291 ~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  367 (454)
T 1qcf_A          291 AQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD  367 (454)
T ss_dssp             HHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHH
Confidence            99999999999   8999999999999999987543                      2456799999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      |||||+++|||+| |+.|
T Consensus       368 vwslG~~l~el~t~g~~P  385 (454)
T 1qcf_A          368 VWSFGILLMEIVTYGRIP  385 (454)
T ss_dssp             HHHHHHHHHHHHTTSCCS
T ss_pred             HHhHHHHHHHHHhCCCCC
Confidence            9999999999999 8876

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=2e-30  Score=211.86  Aligned_cols=144  Identities=22%  Similarity=0.362  Sum_probs=125.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++..++..++||||+++ +|.+++.....    .+++..+.
T Consensus        31 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~----~~~~~~~~  103 (288)
T 1ob3_A           31 LKKIRLEKEDEGIPSTTI--REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEG----GLESVTAK  103 (288)
T ss_dssp             EEEECCSSGGGCCCHHHH--HHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTT----CCCHHHHH
T ss_pred             EEEEeccccccccchhHH--HHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhccc----CCCHHHHH
Confidence            8888654332    3455  999999999999999999999999999999999985 99998876432    68889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||.|||   +++++||||||+||+++.++.+                     .||+.|+|||++.+. .++.
T Consensus       104 ~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  180 (288)
T 1ob3_A          104 SFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST  180 (288)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCT
T ss_pred             HHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCc
Confidence            99999999999999   8999999999999999876543                     478889999999764 5899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|++|++|
T Consensus       181 ~~DiwslG~il~~l~~g~~p  200 (288)
T 1ob3_A          181 TIDIWSVGCIFAEMVNGTPL  200 (288)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999976

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=1.8e-30  Score=226.51  Aligned_cols=144  Identities=23%  Similarity=0.312  Sum_probs=128.0

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.+++.++||||+++++++...+..++||||+++|+|.+++....     .+++..+
T Consensus        46 vK~i~~~~~~~~~~~~~~~--~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----~l~~~~~  118 (476)
T 2y94_A           46 VKILNRQKIRSLDVVGKIR--REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-----RLDEKES  118 (476)
T ss_dssp             EEEEEHHHHHHTTTHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSS-----SCCHHHH
T ss_pred             EEEEEhhhccCHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcC-----CCCHHHH
Confidence            888864321     23566  99999999999999999999999999999999999999999997643     6899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCC-Cc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNC-NE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~-~~  207 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                    +||+.|+|||++.+..+ +.
T Consensus       119 ~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  195 (476)
T 2y94_A          119 RRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP  195 (476)
T ss_dssp             HHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSH
T ss_pred             HHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCC
Confidence            999999999999999   9999999999999999876533                    58899999999988765 78


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|++|+.|
T Consensus       196 ~~DiwSlGvil~elltG~~P  215 (476)
T 2y94_A          196 EVDIWSSGVILYALLCGTLP  215 (476)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             cceehhhHHHHHHHhhCCCC
Confidence            99999999999999999987

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=9.2e-31  Score=218.41  Aligned_cols=149  Identities=23%  Similarity=0.441  Sum_probs=128.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQ-----------  139 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~-----------  139 (227)
                      ||.++.....   +.+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++.......           
T Consensus        82 vK~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  159 (343)
T 1luf_A           82 VKMLKEEASADMQADFQ--REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST  159 (343)
T ss_dssp             EEECCTTCCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-------------
T ss_pred             EEEeccccCHHHHHHHH--HHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccc
Confidence            8888755433   4566  99999999999999999999999999999999999999999997532110           


Q ss_pred             --------CcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------
Q 040292          140 --------LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------  188 (227)
Q Consensus       140 --------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------  188 (227)
                              ..++++..+..++.|++.||.|||   +++++||||||+||+++.++.+                       
T Consensus       160 ~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  236 (343)
T 1luf_A          160 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGND  236 (343)
T ss_dssp             ---------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----C
T ss_pred             cccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCC
Confidence                    136889999999999999999999   8999999999999999876432                       


Q ss_pred             ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+|+.|+|||.+.+..++.++||||||+++|+|++ |..|
T Consensus       237 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  276 (343)
T 1luf_A          237 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  276 (343)
T ss_dssp             CBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             cccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence            36677999999988889999999999999999999 8766

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=4e-30  Score=210.93  Aligned_cols=133  Identities=26%  Similarity=0.456  Sum_probs=117.4

Q ss_pred             ccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHH
Q 040292           84 EEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAY  161 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~  161 (227)
                      +.+.  +|+.++++++||||+++++++..  ++..++||||+++++|.+++..      .++++..+..++.|++.||.|
T Consensus        81 ~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~  152 (298)
T 2zv2_A           81 EQVY--QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEY  152 (298)
T ss_dssp             CHHH--HHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHH--HHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHH
Confidence            3455  99999999999999999999986  5578999999999999887643      268999999999999999999


Q ss_pred             hhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC---CCchhhHHHHHHH
Q 040292          162 LHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN---CNEKSDVYSFGAL  217 (227)
Q Consensus       162 LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~---~~~~~DvwS~G~i  217 (227)
                      ||   +.+++||||||+||+++.++.+                     .||+.|+|||.+.+..   ++.++|||||||+
T Consensus       153 lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~  229 (298)
T 2zv2_A          153 LH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT  229 (298)
T ss_dssp             HH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHH
T ss_pred             HH---HCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHH
Confidence            99   8999999999999999876532                     5788999999997665   3788999999999


Q ss_pred             HHHHHhCCCC
Q 040292          218 LLELLTGKKG  227 (227)
Q Consensus       218 l~el~tg~~p  227 (227)
                      +|+|++|+.|
T Consensus       230 l~~l~~g~~p  239 (298)
T 2zv2_A          230 LYCFVFGQCP  239 (298)
T ss_dssp             HHHHHHSSCS
T ss_pred             HHHHHHCCCC
Confidence            9999999977

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.6e-30  Score=215.55  Aligned_cols=148  Identities=21%  Similarity=0.350  Sum_probs=125.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-CCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-SQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-~~~~~l~~~~~~  149 (227)
                      ||.++.....   +.+.  +|+.++++++||||+++++++..++..++||||++ |+|.+++..... .....+++..+.
T Consensus        35 iK~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~  111 (317)
T 2pmi_A           35 LKEVKLDSEEGTPSTAI--REISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVK  111 (317)
T ss_dssp             EEEEECCSTTCSCHHHH--HHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHH
T ss_pred             EEEeecccccccHHHHH--HHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHH
Confidence            8888754433   4556  99999999999999999999999999999999998 699988864321 111258889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||++.+. .++.
T Consensus       112 ~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  188 (317)
T 2pmi_A          112 YFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYST  188 (317)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCT
T ss_pred             HHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCc
Confidence            99999999999999   8999999999999999876533                     478889999999764 5899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|||||||++|+|++|+.|
T Consensus       189 ~~DiwslG~il~el~~g~~p  208 (317)
T 2pmi_A          189 SIDIWSCGCILAEMITGKPL  208 (317)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999976

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=2.1e-30  Score=215.40  Aligned_cols=144  Identities=22%  Similarity=0.401  Sum_probs=123.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+.++++++||||+++++++. ++..++||||+++|+|.+++.....    .+++..+..
T Consensus        47 ~K~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~  119 (325)
T 3kex_A           47 IKVIEDKSGRQSFQAVT--DHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRG----ALGPQLLLN  119 (325)
T ss_dssp             EEEECCTTSCSCBCSCC--HHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGG----GSCTTHHHH
T ss_pred             EEeccccccHHHHHHHH--HHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccc----cCCHHHHHH
Confidence            5666444322   4556  9999999999999999999886 5678899999999999999976532    688899999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                       .+++.|+|||.+.+..++.
T Consensus       120 ~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (325)
T 3kex_A          120 WGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH  196 (325)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCCh
Confidence            9999999999999   8999999999999999876543                       3566899999999889999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++||||||+++|+|+| |+.|
T Consensus       197 ~~Di~slG~~l~el~~~g~~p  217 (325)
T 3kex_A          197 QSDVWSYGVTVWELMTFGAEP  217 (325)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCT
T ss_pred             hhHhHHhHHHHHHHHhCCCCC
Confidence            9999999999999999 8876

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=2.5e-30  Score=211.56  Aligned_cols=144  Identities=21%  Similarity=0.338  Sum_probs=123.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++..++..++||||+++ ++.+.+....+    .+++..+.
T Consensus        32 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~----~l~~~~~~  104 (292)
T 3o0g_A           32 LKRVRLDDDDEGVPSSAL--REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNG----DLDPEIVK  104 (292)
T ss_dssp             EEEEESSCSSTTHHHHHH--HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTT----CCCHHHHH
T ss_pred             EEeeeccCCcCCcchHHH--HHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCC----CCCHHHHH
Confidence            8888755433    3455  999999999999999999999999999999999975 66665554332    68999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~  207 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||.+.+.. ++.
T Consensus       105 ~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  181 (292)
T 3o0g_A          105 SFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST  181 (292)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCT
T ss_pred             HHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCc
Confidence            99999999999999   8999999999999999876543                     4688899999997765 799


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|++|..|
T Consensus       182 ~~DiwslG~il~~l~~~~~p  201 (292)
T 3o0g_A          182 SIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             HHHHHHHHHHHHHHTTTSCC
T ss_pred             hHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999998765

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=3.6e-30  Score=213.56  Aligned_cols=144  Identities=23%  Similarity=0.362  Sum_probs=128.7

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......        +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....     ++++
T Consensus        42 vK~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~  114 (321)
T 2a2a_A           42 AKFIKKRQSRASRRGVSREEIE--REVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----SLSE  114 (321)
T ss_dssp             EEEEEBCSSSSCSSSBCHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-----CEEH
T ss_pred             EEEEecccccccccchhHHHHH--HHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcC-----CCCH
Confidence            8888654332        3466  99999999999999999999999999999999999999999997643     6889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----ce--------------------ecccCcccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----KL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----~~--------------------~g~~~y~aPE~~~  201 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||+++.++    .+                    .||+.|+|||.+.
T Consensus       115 ~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~  191 (321)
T 2a2a_A          115 EEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN  191 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCccccc
Confidence            999999999999999999   89999999999999998765    11                    4788899999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++||||||+++|+|++|..|
T Consensus       192 ~~~~~~~~Di~slG~il~~l~~g~~p  217 (321)
T 2a2a_A          192 YEPLGLEADMWSIGVITYILLSGASP  217 (321)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCCCCccccHHHHHHHHHHHHCCCC
Confidence            88899999999999999999999987

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.97  E-value=5.6e-30  Score=209.55  Aligned_cols=144  Identities=17%  Similarity=0.201  Sum_probs=129.9

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+......+.+.  +|+.+++++ +|+|++++++++..+...++||||+ +++|.+++.....    ++++..+..++
T Consensus        40 vK~~~~~~~~~~~~--~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----~~~~~~~~~i~  112 (298)
T 1csn_A           40 IKFEPRRSDAPQLR--DEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGR----KFSVKTVAMAA  112 (298)
T ss_dssp             EEEEECCTTSCCHH--HHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT----CCCHHHHHHHH
T ss_pred             EEEeccCCccHHHH--HHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhcc----CCCHHHHHHHH
Confidence            88887766667788  999999999 8999999999999999999999999 8999999976432    68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----e----------------------------ecccCcccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----L----------------------------IGTFGFIAPEC  199 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----~----------------------------~g~~~y~aPE~  199 (227)
                      .|++.||.|||   +.+++||||||+||+++.++.     +                            .||+.|+|||.
T Consensus       113 ~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  189 (298)
T 1csn_A          113 KQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT  189 (298)
T ss_dssp             HHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchh
Confidence            99999999999   999999999999999976542     1                            37788999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.+..++.++||||||+++|||++|+.|
T Consensus       190 ~~~~~~~~~~Di~slG~il~el~~g~~p  217 (298)
T 1csn_A          190 HLGREQSRRDDLEALGHVFMYFLRGSLP  217 (298)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             hcCCCCChHHHHHHHHHHHHHHHcCCCC
Confidence            9988899999999999999999999987

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=9e-31  Score=221.39  Aligned_cols=149  Identities=23%  Similarity=0.390  Sum_probs=127.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC--CCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG--SQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~--~~~~~l~~~~~  148 (227)
                      ||.+......   .++.  +|+.++++++||||+++++++...+..++||||+++|+|.+++.....  .....+++..+
T Consensus       106 vK~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  183 (367)
T 3l9p_A          106 VKTLPEVCSEQDELDFL--MEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL  183 (367)
T ss_dssp             EEECCSSCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHH
T ss_pred             EEecccccChhhHHHHH--HHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHH
Confidence            8887654333   3455  999999999999999999999999999999999999999999975332  12235889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---e-----------------------ecccCccccccccC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---L-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..++.|++.||.|||   +++|+||||||+||+++.++.   +                       .||+.|+|||.+.+
T Consensus       184 ~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  260 (367)
T 3l9p_A          184 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFME  260 (367)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcC
Confidence            999999999999999   899999999999999985442   1                       35778999999998


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..++.++|||||||++|||++ |..|
T Consensus       261 ~~~~~~~DvwslG~il~ellt~g~~p  286 (367)
T 3l9p_A          261 GIFTSKTDTWSFGVLLWEIFSLGYMP  286 (367)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            899999999999999999998 8765

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=5e-31  Score=221.86  Aligned_cols=144  Identities=19%  Similarity=0.346  Sum_probs=129.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     .+++..+..
T Consensus        63 ~K~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~  135 (360)
T 3eqc_A           63 RKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-----RIPEQILGK  135 (360)
T ss_dssp             EEEEECCCCHHHHHHHH--HHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHS-----SCCHHHHHH
T ss_pred             EEEeccccCHHHHHHHH--HHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcC-----CCCHHHHHH
Confidence            8887765433   4566  99999999999999999999999999999999999999999997643     688999999


Q ss_pred             HHHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.|++.||.|||   +. +++||||||+||+++.++.+                   .||+.|+|||++.+..++.++|
T Consensus       136 i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  212 (360)
T 3eqc_A          136 VSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD  212 (360)
T ss_dssp             HHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHH
T ss_pred             HHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhh
Confidence            9999999999999   75 89999999999999877543                   5888999999999889999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||||+++|+|++|+.|
T Consensus       213 i~slG~il~~l~~g~~p  229 (360)
T 3eqc_A          213 IWSMGLSLVEMAVGRYP  229 (360)
T ss_dssp             HHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999976

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2e-30  Score=216.70  Aligned_cols=149  Identities=24%  Similarity=0.438  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCC----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQ----------  139 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~----------  139 (227)
                      ||.+......   +.+.  +|+.++.++ +||||+++++++...+..++||||+++|+|.+++.......          
T Consensus        80 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  157 (344)
T 1rjb_A           80 VKMLKEKADSSEREALM--SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ  157 (344)
T ss_dssp             EEEECC------CHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC----------
T ss_pred             EEecccccCHHHHHHHH--HHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhh
Confidence            8888654322   4566  999999999 99999999999999999999999999999999997653210          


Q ss_pred             --------CcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------
Q 040292          140 --------LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------  188 (227)
Q Consensus       140 --------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------  188 (227)
                              ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       
T Consensus       158 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~  234 (344)
T 1rjb_A          158 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNA  234 (344)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTE
T ss_pred             cccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCc
Confidence                    124789999999999999999999   8999999999999999876543                       


Q ss_pred             ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .||+.|+|||.+.+..++.++||||||+++|+|+| |..|
T Consensus       235 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  274 (344)
T 1rjb_A          235 RLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  274 (344)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             cCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence            35667999999988889999999999999999998 8766

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1.6e-30  Score=217.55  Aligned_cols=143  Identities=24%  Similarity=0.358  Sum_probs=125.7

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.+++.++||||+++++++..++..++||||+ +|+|.+++....     .+++..+
T Consensus        39 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~-----~l~~~~~  110 (336)
T 3h4j_B           39 LKFISRQLLKKSDMHMRVE--REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK-----RMTEDEG  110 (336)
T ss_dssp             EEEEEHHHHHHTTCSHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHC-----SCCHHHH
T ss_pred             EEEEehHHccchhHHHHHH--HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcC-----CCCHHHH
Confidence            88875431     123566  9999999999999999999999999999999999 689999886543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCC-Cc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNC-NE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~-~~  207 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                    +||+.|+|||.+.+..+ +.
T Consensus       111 ~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  187 (336)
T 3h4j_B          111 RRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGP  187 (336)
T ss_dssp             HHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCH
T ss_pred             HHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCC
Confidence            999999999999999   8999999999999999976533                    58899999999987765 78


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|++|+.|
T Consensus       188 ~~DiwslG~il~~ll~g~~P  207 (336)
T 3h4j_B          188 EVDVWSCGIVLYVMLVGRLP  207 (336)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             ccchhHHHHHHHHHHhCCCC
Confidence            99999999999999999987

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=5.4e-31  Score=215.75  Aligned_cols=145  Identities=23%  Similarity=0.438  Sum_probs=125.6

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++...  ...++||||+++|+|.+++....    ..+++..+.
T Consensus        44 vK~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~  117 (295)
T 3ugc_A           44 VKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK----ERIDHIKLL  117 (295)
T ss_dssp             EEEESCCCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCG----GGCCHHHHH
T ss_pred             EEEcccCCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcc----cccCHHHHH
Confidence            8888765433  4566  999999999999999999998654  45899999999999999997643    258899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                        .++..|+|||.+.+..+
T Consensus       118 ~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (295)
T 3ugc_A          118 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF  194 (295)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCC
Confidence            99999999999999   8999999999999999876543                        24556999999998899


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||||+++|+|+||..|
T Consensus       195 ~~~~Di~slG~~l~~l~~g~~~  216 (295)
T 3ugc_A          195 SVASDVWSFGVVLYELFTYIEK  216 (295)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCT
T ss_pred             ChHHHHHHHHHHHHHHHhcccc
Confidence            9999999999999999998765

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=2.1e-30  Score=214.71  Aligned_cols=147  Identities=23%  Similarity=0.352  Sum_probs=124.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCC--cceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETE--VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...+  ..++||||+++++|.+++......  ..+++..+
T Consensus        39 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~  114 (319)
T 4euu_A           39 IKVFNNISFLRPVDVQM--REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA--YGLPESEF  114 (319)
T ss_dssp             EEEECGGGGGSCHHHHH--HHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGT--TCCCHHHH
T ss_pred             EEEeccccccchHHHHH--HHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccc--cCCCHHHH
Confidence            8888754332   4555  9999999999999999999998765  678999999999999999864321  13899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceee----cCCCc--------------------eecccCcccccccc---
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV----NDNDK--------------------LIGTFGFIAPECIT---  201 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~----~~~~~--------------------~~g~~~y~aPE~~~---  201 (227)
                      ..++.|++.||.|||   +.+++||||||+||++    +.++.                    ..||+.|+|||++.   
T Consensus       115 ~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  191 (319)
T 4euu_A          115 LIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV  191 (319)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhcc
Confidence            999999999999999   8999999999999998    44322                    15888999999885   


Q ss_pred             -----CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 -----TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 -----~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                           +..++.++|||||||++|||++|+.|
T Consensus       192 ~~~~~~~~~~~~~DiwslG~il~el~~g~~p  222 (319)
T 4euu_A          192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLP  222 (319)
T ss_dssp             SCCCCCCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccccCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                 46788999999999999999999987

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=1.4e-30  Score=214.66  Aligned_cols=149  Identities=22%  Similarity=0.396  Sum_probs=127.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS------------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~------------  138 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++......            
T Consensus        58 vK~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  135 (314)
T 2ivs_A           58 VKMLKENASPSELRDLL--SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN  135 (314)
T ss_dssp             EEECCTTCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC-------
T ss_pred             EEeccCCCCHHHHHHHH--HHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccc
Confidence            8887655433   3556  9999999999999999999999999999999999999999999754320            


Q ss_pred             -------CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------
Q 040292          139 -------QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------  188 (227)
Q Consensus       139 -------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------  188 (227)
                             ....+++..+..++.|++.||.|||   +++++||||||+||+++.++.+                       
T Consensus       136 ~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  212 (314)
T 2ivs_A          136 SSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQG  212 (314)
T ss_dssp             ---------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCC
T ss_pred             ccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCC
Confidence                   0124889999999999999999999   8999999999999999876533                       


Q ss_pred             ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+++.|+|||.+.+..++.++||||+|+++|+|++ |..|
T Consensus       213 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  252 (314)
T 2ivs_A          213 RIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP  252 (314)
T ss_dssp             CSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence            35567999999988889999999999999999999 8765

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.97  E-value=1.3e-30  Score=216.95  Aligned_cols=144  Identities=23%  Similarity=0.389  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+.++++++||||++++++|..+ ..++|+||+++|+|.+++.....    .+++..+..
T Consensus        49 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~~g~L~~~l~~~~~----~~~~~~~~~  121 (327)
T 3poz_A           49 IKELREATSPKANKEIL--DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD----NIGSQYLLN  121 (327)
T ss_dssp             EEEC-------CHHHHH--HHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHSTT----SCCHHHHHH
T ss_pred             EeecccccCHHHHHHHH--HHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecCCCcHHHHHHhcCC----CCCHHHHHH
Confidence            5665443322   4566  999999999999999999999875 47899999999999999976442    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                       .+|+.|+|||.+.+..++.
T Consensus       122 ~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  198 (327)
T 3poz_A          122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH  198 (327)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCc
Confidence            9999999999999   8999999999999999876543                       3566899999999999999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|||||||++|||+| |+.|
T Consensus       199 ~~Di~slG~il~ellt~g~~p  219 (327)
T 3poz_A          199 QSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCT
T ss_pred             hhhhhhhHHHHHHHHhcCCCC
Confidence            9999999999999999 8876

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=1.1e-30  Score=219.43  Aligned_cols=149  Identities=19%  Similarity=0.396  Sum_probs=126.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCc-ceeEeecccCCChhhhhcCCCCCC---------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEV-PILVFEFVACGTLADRIHDPNGSQ---------  139 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~-~~lV~E~~~~gsL~~~l~~~~~~~---------  139 (227)
                      ||.++.....   +.+.  +|+.++.++ +||||++++++|...+. .++||||+++|+|.+++.......         
T Consensus        57 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  134 (359)
T 3vhe_A           57 VKMLKEGATHSEHRALM--SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGAR  134 (359)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----
T ss_pred             EEEecCcCCHHHHHHHH--HHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccch
Confidence            8888765443   3466  999999999 89999999999987654 889999999999999997653210         


Q ss_pred             ----------------------------------------------------CcccCHHHHHHHHHHHHHHHHHhhhcCC
Q 040292          140 ----------------------------------------------------LEPFLMKHRLKVAMEIANAVAYLHVGFS  167 (227)
Q Consensus       140 ----------------------------------------------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~  167 (227)
                                                                          ...+++..+..++.|++.||.|||   +
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~  211 (359)
T 3vhe_A          135 FRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---S  211 (359)
T ss_dssp             -------------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---H
T ss_pred             hhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---H
Confidence                                                                112889999999999999999999   8


Q ss_pred             CCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-
Q 040292          168 RPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-  223 (227)
Q Consensus       168 ~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-  223 (227)
                      .+++||||||+||+++.++.+                       .||+.|+|||++.+..++.++||||||+++|||+| 
T Consensus       212 ~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  291 (359)
T 3vhe_A          212 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL  291 (359)
T ss_dssp             TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred             CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhc
Confidence            999999999999999865432                       46778999999998899999999999999999998 


Q ss_pred             CCCC
Q 040292          224 GKKG  227 (227)
Q Consensus       224 g~~p  227 (227)
                      |+.|
T Consensus       292 g~~p  295 (359)
T 3vhe_A          292 GASP  295 (359)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            8876

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=2.2e-30  Score=229.77  Aligned_cols=146  Identities=21%  Similarity=0.350  Sum_probs=128.8

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ....+.  +|+.+|++++||||+++++++.+.+..|+||||++||+|.+++.....   ..+++..+
T Consensus       214 vK~l~k~~~~~~~~~~~~~--~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~---~~l~e~~~  288 (576)
T 2acx_A          214 CKKLEKKRIKKRKGEAMAL--NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ---AGFPEARA  288 (576)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSS---CCCCHHHH
T ss_pred             EEEEEhHhhhhhHHHHHHH--HHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCC---CCCCHHHH
Confidence            78775432     113455  999999999999999999999999999999999999999999976431   24889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ..++.|++.||.|||   +++|+||||||+||+++.++.+                    +||+.|+|||++.+..++.+
T Consensus       289 ~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~  365 (576)
T 2acx_A          289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS  365 (576)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSH
T ss_pred             HHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCcc
Confidence            999999999999999   8999999999999999876543                    58999999999998889999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+|||||++|||++|++|
T Consensus       366 ~DiwSLGvilyeLltG~~P  384 (576)
T 2acx_A          366 PDWWALGCLLYEMIAGQSP  384 (576)
T ss_dssp             HHHHHHHHHHHHHHHSSCS
T ss_pred             chHHHHHHHHHHHHhCCCC
Confidence            9999999999999999987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=2.4e-30  Score=208.54  Aligned_cols=145  Identities=26%  Similarity=0.482  Sum_probs=128.3

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++.....    .+++..+..++
T Consensus        37 iK~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~  110 (267)
T 3t9t_A           37 IKTIREGAMSEEDFI--EEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG----LFAAETLLGMC  110 (267)
T ss_dssp             EEEECTTTBCHHHHH--HHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTT----CCCHHHHHHHH
T ss_pred             EEEccccCCCHHHHH--HHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcc----cCCHHHHHHHH
Confidence            8888765544 5677  999999999999999999999999999999999999999999976432    68899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+.+..++.++|
T Consensus       111 ~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  187 (267)
T 3t9t_A          111 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD  187 (267)
T ss_dssp             HHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhc
Confidence            99999999999   8999999999999999876543                      2456799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      +||+|+++|+|++ |+.|
T Consensus       188 i~slG~il~~l~~~g~~p  205 (267)
T 3t9t_A          188 VWSFGVLMWEVFSEGKIP  205 (267)
T ss_dssp             HHHHHHHHHHHHTTSCCT
T ss_pred             hhhhHHHHHHHhccCCCC
Confidence            9999999999999 7766

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=6.9e-31  Score=227.85  Aligned_cols=152  Identities=26%  Similarity=0.379  Sum_probs=128.6

Q ss_pred             eeecCCC---eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcc
Q 040292           67 GFLQDHP---ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP  142 (227)
Q Consensus        67 ~~~~~~~---vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~  142 (227)
                      |...+..   ||.++..... ++|.  +|+.+|++++||||+++++++.. +..++||||+++|+|.+++....+   ..
T Consensus       203 ~~~~~~~~vavK~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~---~~  276 (452)
T 1fmk_A          203 GTWNGTTRVAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---KY  276 (452)
T ss_dssp             EEETTTEEEEEEECCTTSSCHHHHH--HHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHH---TT
T ss_pred             EEECCCceEEEEEeccCCCCHHHHH--HHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCC---CC
Confidence            4444433   8888765433 5677  99999999999999999999876 678999999999999999974211   15


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccc
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECI  200 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~  200 (227)
                      +++..+..++.|++.||+|||   +++++||||||+||+++.++.+                      .+++.|+|||.+
T Consensus       277 ~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~  353 (452)
T 1fmk_A          277 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA  353 (452)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCGGGSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccccccCHhHH
Confidence            788999999999999999999   8999999999999999875432                      245679999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ....++.++||||||+++|||++ |+.|
T Consensus       354 ~~~~~~~~sDvwslG~~l~el~t~g~~P  381 (452)
T 1fmk_A          354 LYGRFTIKSDVWSFGILLTELTTKGRVP  381 (452)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             hcCCCCccccHHhHHHHHHHHHhCCCCC
Confidence            98899999999999999999999 7766

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.96  E-value=3.9e-30  Score=208.71  Aligned_cols=143  Identities=21%  Similarity=0.357  Sum_probs=125.2

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     .+++..+..+
T Consensus        39 ~k~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~i  111 (277)
T 3f3z_A           39 AKKIPKYFVEDVDRFK--QEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKR-----VFRESDAARI  111 (277)
T ss_dssp             EEEEEGGGCSCHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-----SCCHHHHHHH
T ss_pred             EEeehhhccchHHHHH--HHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcC-----CCCHHHHHHH
Confidence            7777654333  5666  99999999999999999999999999999999999999999887543     6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceee---cCCCce--------------------ecccCccccccccCCCCCch
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHV---NDNDKL--------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~---~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      +.|++.||.|||   +.+++||||||+||++   +.++.+                    .||+.|+|||.+.+ .++.+
T Consensus       112 ~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~  187 (277)
T 3f3z_A          112 MKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPE  187 (277)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTT
T ss_pred             HHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhcc-cCCch
Confidence            999999999999   8999999999999999   443322                    58889999998865 48999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+|+++|+|++|+.|
T Consensus       188 ~Di~slG~~l~~l~~g~~p  206 (277)
T 3f3z_A          188 CDEWSAGVMMYVLLCGYPP  206 (277)
T ss_dssp             HHHHHHHHHHHHHHHSSCS
T ss_pred             hhehhHHHHHHHHHHCCCC
Confidence            9999999999999999876

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.96  E-value=2.6e-30  Score=217.19  Aligned_cols=144  Identities=26%  Similarity=0.441  Sum_probs=125.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++++++||||+++++++..++..++||||+. |+|.+++....    .++++..+
T Consensus        84 iK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~----~~l~~~~~  156 (348)
T 1u5q_A           84 IKKMSYSGKQSNEKWQDII--KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHK----KPLQEVEI  156 (348)
T ss_dssp             EEEEESCSSCHHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHT----SCCCHHHH
T ss_pred             EEEEccccccchHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhc----CCCCHHHH
Confidence            8888755433     3456  99999999999999999999999999999999997 68888775432    26889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCcccccccc---CCCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECIT---TGNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~---~~~~~~~  208 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                 .||+.|+|||++.   ...++.+
T Consensus       157 ~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  233 (348)
T 1u5q_A          157 AAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK  233 (348)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTH
T ss_pred             HHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcceeCHhhhccccCCCCCcH
Confidence            999999999999999   8999999999999999876543                 5889999999984   4568999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|||||||++|||++|++|
T Consensus       234 ~DiwslG~il~ell~g~~p  252 (348)
T 1u5q_A          234 VDVWSLGITCIELAERKPP  252 (348)
T ss_dssp             HHHHHHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999987

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=1.1e-29  Score=206.95  Aligned_cols=143  Identities=30%  Similarity=0.537  Sum_probs=122.0

Q ss_pred             eEEEcCCCCc---------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT---------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~---------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.+......         +.+.  +|+.++++++||||+++++++.+..  ++||||+++|+|.+++.....    +++
T Consensus        49 iK~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~----~~~  120 (287)
T 4f0f_A           49 IKSLILGDSEGETEMIEKFQEFQ--REVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAH----PIK  120 (287)
T ss_dssp             EEECCCCTTTCCHHHHCCSHHHH--HHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTS----CCC
T ss_pred             EEEeeccccccchhHHHHHHHHH--HHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccC----Ccc
Confidence            8887654332         3455  9999999999999999999986543  799999999999998876542    689


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCceeecCCCc-----e------------------ecccCcccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRP--IVFRDIKPFTTHVNDNDK-----L------------------IGTFGFIAPEC  199 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~--i~H~dlkp~nil~~~~~~-----~------------------~g~~~y~aPE~  199 (227)
                      +..+..++.|++.||.|||   +.+  ++||||||+||+++.++.     +                  .||+.|+|||.
T Consensus       121 ~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~  197 (287)
T 4f0f_A          121 WSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPET  197 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccccCchh
Confidence            9999999999999999999   888  999999999999976543     1                  57889999999


Q ss_pred             cc--CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 IT--TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~--~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.  ...++.++||||+|+++|+|++|+.|
T Consensus       198 ~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  227 (287)
T 4f0f_A          198 IGAEEESYTEKADTYSFAMILYTILTGEGP  227 (287)
T ss_dssp             SSCSSCEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred             hccCCCCcCchhhHHHHHHHHHHHHcCCCC
Confidence            84  44578999999999999999999987

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=2.7e-30  Score=211.21  Aligned_cols=144  Identities=27%  Similarity=0.490  Sum_probs=122.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    +.+.  +|+.++++++||||+++++++ ..+..++||||+++++|.+++.....    .+++..+.
T Consensus        51 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~  123 (289)
T 3og7_A           51 VKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASET----KFEMKKLI  123 (289)
T ss_dssp             EEEESCSSCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC-------CCHHHHH
T ss_pred             EEEEeccCCCHHHHHHHH--HHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccC----CCCHHHHH
Confidence            8888765443    4566  999999999999999999965 45678999999999999999975442    68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccccccc---CC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECIT---TG  203 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~---~~  203 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                       .||+.|+|||.+.   ..
T Consensus       124 ~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  200 (289)
T 3og7_A          124 DIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN  200 (289)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----C
T ss_pred             HHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCC
Confidence            99999999999999   8999999999999999876533                       4788999999986   55


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++||||||+++|+|++|+.|
T Consensus       201 ~~~~~~Di~slG~il~el~~g~~p  224 (289)
T 3og7_A          201 PYSFQSDVYAFGIVLYELMTGQLP  224 (289)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCcccchHHHHHHHHHHHHCCCC
Confidence            688999999999999999999877

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.96  E-value=4.3e-30  Score=219.67  Aligned_cols=143  Identities=24%  Similarity=0.370  Sum_probs=119.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhc-CCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQ-MSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+..   ...+.  +|+.++.+ .+||||+++++++..    ....|+||||+++|+|.+++.....   ..+++..+
T Consensus        92 iK~~~~---~~~~~--~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~---~~l~~~~~  163 (400)
T 1nxk_A           92 LKMLQD---CPKAR--REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREA  163 (400)
T ss_dssp             EEEEEC---SHHHH--HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC------CCBHHHH
T ss_pred             EEEeCc---chhHH--HHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCC---CCCCHHHH
Confidence            777753   23455  89988744 599999999999875    5568999999999999999986432   25899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC---CCce--------------------ecccCccccccccCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND---NDKL--------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~---~~~~--------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ..++.|++.||.|||   +.+|+||||||+||+++.   ++.+                    +||+.|+|||++.+..+
T Consensus       164 ~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  240 (400)
T 1nxk_A          164 SEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKY  240 (400)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCS
T ss_pred             HHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCC
Confidence            999999999999999   899999999999999986   3322                    57899999999998899


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|||||||++|||++|+.|
T Consensus       241 ~~~~DiwslG~il~ell~g~~p  262 (400)
T 1nxk_A          241 DKSCDMWSLGVIMYILLCGYPP  262 (400)
T ss_dssp             SSHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCcccHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999876

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=1.6e-30  Score=210.24  Aligned_cols=150  Identities=29%  Similarity=0.460  Sum_probs=123.2

Q ss_pred             eeecCCC--eEEEcCCCCc------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC
Q 040292           67 GFLQDHP--ISEFGDNLNT------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS  138 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~  138 (227)
                      +...+..  ||.+......      +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++...   
T Consensus        26 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~---  100 (271)
T 3dtc_A           26 AFWIGDEVAVKAARHDPDEDISQTIENVR--QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK---  100 (271)
T ss_dssp             EEETTEEEEEEEC----------CHHHHH--HHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSS---
T ss_pred             EEEcCCeEEEEEEecCCcccHHHHHHHHH--HHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcC---
Confidence            4444433  7877654322      3566  8999999999999999999999999999999999999999998642   


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCC---eEEecCCCCceeecC--------CCce-------------------
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRP---IVFRDIKPFTTHVND--------NDKL-------------------  188 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~---i~H~dlkp~nil~~~--------~~~~-------------------  188 (227)
                         .+++..+..++.|++.||.|||   +.+   ++||||||+||+++.        ++.+                   
T Consensus       101 ---~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  174 (271)
T 3dtc_A          101 ---RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA  174 (271)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccccccCC
Confidence               6889999999999999999999   666   999999999999975        2211                   


Q ss_pred             ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .||+.|+|||.+.+..++.++||||||+++|+|++|+.|
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p  213 (271)
T 3dtc_A          175 AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP  213 (271)
T ss_dssp             -CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCT
T ss_pred             CCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            578899999999988899999999999999999999987

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.96  E-value=3.2e-30  Score=218.99  Aligned_cols=149  Identities=22%  Similarity=0.419  Sum_probs=128.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||.+......   +.+.  +|+.+++++ +||||++++++|..++..++||||+++|+|.+++......           
T Consensus       106 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  183 (382)
T 3tt0_A          106 VKMLKSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN  183 (382)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSS
T ss_pred             EEeeccccCHHHHHHHH--HHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccc
Confidence            8888765443   3455  999999999 9999999999999999999999999999999999754311           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       .+|+.|+
T Consensus       184 ~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~  260 (382)
T 3tt0_A          184 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM  260 (382)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGS
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCccee
Confidence            1125899999999999999999999   8999999999999999876543                       3566799


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||++.+..++.++|||||||++|+|++ |..|
T Consensus       261 aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p  293 (382)
T 3tt0_A          261 APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP  293 (382)
T ss_dssp             CHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence            9999998899999999999999999999 8765

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=2.4e-30  Score=210.64  Aligned_cols=144  Identities=25%  Similarity=0.368  Sum_probs=123.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++. ++..++||||+++++|.+++.....    ++++..+..
T Consensus        48 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~  120 (281)
T 1mp8_A           48 IKTCKNCTSDSVREKFL--QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL  120 (281)
T ss_dssp             EEECTTTTSHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTT----TSCHHHHHH
T ss_pred             EEeccccCCHHHHHHHH--HHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCC----CCCHHHHHH
Confidence            6666554333   4566  9999999999999999999984 5678999999999999999975432    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+....++.+
T Consensus       121 ~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  197 (281)
T 1mp8_A          121 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA  197 (281)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHH
T ss_pred             HHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCc
Confidence            9999999999999   8999999999999999876533                      24567999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +||||||+++|||++ |..|
T Consensus       198 ~Di~slG~~l~ell~~g~~p  217 (281)
T 1mp8_A          198 SDVWMFGVCMWEILMHGVKP  217 (281)
T ss_dssp             HHHHHHHHHHHHHHTTSCCT
T ss_pred             cCchHHHHHHHHHHhcCCCC
Confidence            999999999999997 7766

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=5.8e-30  Score=210.54  Aligned_cols=144  Identities=29%  Similarity=0.409  Sum_probs=126.0

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....     .+++..+..+
T Consensus        39 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~  111 (304)
T 2jam_A           39 LKCIKKSPAFRDSSLE--NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG-----VYTEKDASLV  111 (304)
T ss_dssp             EEEEECC------HHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-----CCCHHHHHHH
T ss_pred             EEEEecccccchHHHH--HHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcC-----CCCHHHHHHH
Confidence            8888755433  4566  99999999999999999999999999999999999999999986543     6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceee---cCCCce-------------------ecccCccccccccCCCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHV---NDNDKL-------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~---~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      +.|++.||.|||   +.+++||||||+||++   +.++.+                   .|++.|+|||.+.+..++.++
T Consensus       112 ~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (304)
T 2jam_A          112 IQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAV  188 (304)
T ss_dssp             HHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHH
T ss_pred             HHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchh
Confidence            999999999999   8999999999999999   443322                   478899999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||+|+++|+|++|+.|
T Consensus       189 Di~slG~il~~l~~g~~p  206 (304)
T 2jam_A          189 DCWSIGVITYILLCGYPP  206 (304)
T ss_dssp             HHHHHHHHHHHHHHSSCT
T ss_pred             hHHHHHHHHHHHHHCCCC
Confidence            999999999999999876

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=5e-30  Score=232.30  Aligned_cols=144  Identities=24%  Similarity=0.365  Sum_probs=128.3

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++...     ..+.+.  +|..+|..+ +||||+.+++++...+..|+||||+++|+|.+++....     .+++..
T Consensus       371 vK~l~~~~~~~~~~~~~~~--~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-----~~~~~~  443 (674)
T 3pfq_A          371 VKILKKDVVIQDDDVECTM--VEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG-----RFKEPH  443 (674)
T ss_dssp             EEEEEHHHHHHTTTTHHHH--HHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEeccccccHHHHHHHH--HHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcC-----CCCHHH
Confidence            88876431     123445  899999988 89999999999999999999999999999999997643     689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +.+|+||||||+|||++.++.+                     +||+.|+|||++.+..++
T Consensus       444 ~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~  520 (674)
T 3pfq_A          444 AVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYG  520 (674)
T ss_dssp             HHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBS
T ss_pred             HHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCC
Confidence            9999999999999999   8999999999999999876543                     589999999999989999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+|||||++|||++|++|
T Consensus       521 ~~~DvwSlGvilyelltG~~P  541 (674)
T 3pfq_A          521 KSVDWWAFGVLLYEMLAGQAP  541 (674)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             ccceEechHHHHHHHHcCCCC
Confidence            999999999999999999987

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.96  E-value=5.6e-30  Score=211.33  Aligned_cols=145  Identities=23%  Similarity=0.340  Sum_probs=130.6

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM  153 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~  153 (227)
                      ||.+......+.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....    ..+++..+..++.
T Consensus        59 iK~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~i~~  132 (314)
T 3com_A           59 IKQVPVESDLQEII--KEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN----KTLTEDEIATILQ  132 (314)
T ss_dssp             EEEEETTSCCHHHH--HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHT----CCCCHHHHHHHHH
T ss_pred             EEecCchHHHHHHH--HHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcC----CCCCHHHHHHHHH
Confidence            88888766567777  99999999999999999999999999999999999999999986332    2688999999999


Q ss_pred             HHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhhHH
Q 040292          154 EIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSDVY  212 (227)
Q Consensus       154 ~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~Dvw  212 (227)
                      |++.||.|||   +.+++|+||+|+||+++.++.+                     .|++.|+|||.+.+..++.++|||
T Consensus       133 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  209 (314)
T 3com_A          133 STLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIW  209 (314)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHH
T ss_pred             HHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHH
Confidence            9999999999   8999999999999999876533                     477889999999988899999999


Q ss_pred             HHHHHHHHHHhCCCC
Q 040292          213 SFGALLLELLTGKKG  227 (227)
Q Consensus       213 S~G~il~el~tg~~p  227 (227)
                      |||+++|+|++|+.|
T Consensus       210 slG~il~~l~~g~~p  224 (314)
T 3com_A          210 SLGITAIEMAEGKPP  224 (314)
T ss_dssp             HHHHHHHHHHHSSCT
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999999876

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=1.8e-30  Score=214.44  Aligned_cols=144  Identities=24%  Similarity=0.427  Sum_probs=126.0

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......  +.+.  +|+.++.++ +||||+++++++..++..++||||+++|+|.+++....     .+++..+..
T Consensus        43 vK~~~~~~~~~~~~~~--~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~  115 (316)
T 2ac3_A           43 VKIIEKQPGHIRSRVF--REVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-----HFNELEASV  115 (316)
T ss_dssp             EEEEECCSSCCHHHHH--HHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHS-----SCCHHHHHH
T ss_pred             EEEEeeCcchhHHHHH--HHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccC-----CCCHHHHHH
Confidence            8888765443  4556  999999985 89999999999999999999999999999999997543     688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---e----------------------------ecccCcccccc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---L----------------------------IGTFGFIAPEC  199 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---~----------------------------~g~~~y~aPE~  199 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.   +                            +||+.|+|||.
T Consensus       116 i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  192 (316)
T 2ac3_A          116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV  192 (316)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHH
T ss_pred             HHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHH
Confidence            9999999999999   899999999999999986542   1                            27889999999


Q ss_pred             ccC-----CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITT-----GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~-----~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..     ..++.++|||||||++|+|++|+.|
T Consensus       193 ~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p  225 (316)
T 2ac3_A          193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPP  225 (316)
T ss_dssp             HHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCS
T ss_pred             hhcccccccCCCcccccHhHHHHHHHHHHCCCC
Confidence            865     4478899999999999999999987

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.96  E-value=5.8e-30  Score=210.97  Aligned_cols=144  Identities=19%  Similarity=0.286  Sum_probs=124.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     .+++..+.
T Consensus        33 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~  105 (311)
T 4agu_A           33 IKKFLESEDDPVIKKIAL--REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR-----GVPEHLVK  105 (311)
T ss_dssp             EEEECCCCC-HHHHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSS-----CCCHHHHH
T ss_pred             EEEeeccccchHHHHHHH--HHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhc-----CCCHHHHH
Confidence            8888665443    3455  89999999999999999999999999999999999999999887543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~  207 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||.+.+ ..++.
T Consensus       106 ~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  182 (311)
T 4agu_A          106 SITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP  182 (311)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCT
T ss_pred             HHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCc
Confidence            99999999999999   8999999999999999876543                     47788999999976 56899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+|+++|+|++|+.|
T Consensus       183 ~~Di~slG~il~~l~~g~~p  202 (311)
T 4agu_A          183 PVDVWAIGCVFAELLSGVPL  202 (311)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             chhhHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.96  E-value=1e-29  Score=205.84  Aligned_cols=144  Identities=28%  Similarity=0.433  Sum_probs=126.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     .+++..+..
T Consensus        37 vK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~  109 (276)
T 2yex_A           37 VKIVDMKRAVDCPENIK--KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQR  109 (276)
T ss_dssp             EEEEEGGGCTTHHHHHH--HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-----BCCHHHHHH
T ss_pred             EEEeeeccchhhhHHHH--HHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhcc-----CCCHHHHHH
Confidence            8887644332   4566  99999999999999999999999999999999999999999997643     688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCC-C
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNC-N  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~-~  206 (227)
                      ++.|++.||.|||   +.+++|+||+|+||+++.++.+                       .|++.|+|||.+.+..+ +
T Consensus       110 ~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  186 (276)
T 2yex_A          110 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA  186 (276)
T ss_dssp             HHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCH
T ss_pred             HHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCC
Confidence            9999999999999   8999999999999999876532                       46788999999987664 7


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||||+++|+|++|+.|
T Consensus       187 ~~~Di~slG~il~~l~~g~~p  207 (276)
T 2yex_A          187 EPVDVWSCGIVLTAMLAGELP  207 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCC
T ss_pred             CcchHHHHHHHHHHHHhCCCC
Confidence            789999999999999999876

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=6.9e-30  Score=223.11  Aligned_cols=143  Identities=27%  Similarity=0.408  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++++++||||+++++++...+..++||||+.+|+|.+++....     .+++..+
T Consensus        56 vK~~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~  128 (484)
T 3nyv_A           56 VKVISKRQVKQKTDKESLL--REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-----RFSEVDA  128 (484)
T ss_dssp             EEEEETTTCCBSSCHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-----CCBHHHH
T ss_pred             EEEEEhhhcccchHHHHHH--HHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcC-----CCCHHHH
Confidence            8888654322     3466  99999999999999999999999999999999999999999997654     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC---CCce--------------------ecccCccccccccCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND---NDKL--------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~---~~~~--------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ..++.|++.||.|||   +++++||||||+||+++.   ++.+                    +||+.|+|||++.+ .+
T Consensus       129 ~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~  204 (484)
T 3nyv_A          129 ARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TY  204 (484)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CC
T ss_pred             HHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CC
Confidence            999999999999999   899999999999999953   2221                    58999999999865 68


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||+||++|+|++|.+|
T Consensus       205 ~~~~DiwslG~il~~ll~g~~p  226 (484)
T 3nyv_A          205 DEKCDVWSTGVILYILLSGCPP  226 (484)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCcceeHHHHHHHHHHHHCCCC
Confidence            9999999999999999999987

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=4.7e-30  Score=230.27  Aligned_cols=144  Identities=22%  Similarity=0.389  Sum_probs=125.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   ++|.  +|+.+|++++||||++++++|.. +..++||||+++|+|.+++.....    .+++..+..
T Consensus       368 vK~~~~~~~~~~~~~~~--~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~----~l~~~~~~~  440 (613)
T 2ozo_A          368 IKVLKQGTEKADTEEMM--REAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE----EIPVSNVAE  440 (613)
T ss_dssp             EEECCCCCSSTTHHHHH--HHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTT----TSCHHHHHH
T ss_pred             EEEcCCCCChHHHHHHH--HHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccC----CCCHHHHHH
Confidence            8888764332   4667  99999999999999999999976 568999999999999999975432    689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||+|||   +++|+||||||+||+++.++.+                        .+++.|+|||++....++
T Consensus       441 i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~  517 (613)
T 2ozo_A          441 LLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS  517 (613)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCC
Confidence            9999999999999   8999999999999999876533                        234679999999988999


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++|||||||++|||++ |+.|
T Consensus       518 ~~sDvwSlGv~l~ellt~G~~P  539 (613)
T 2ozo_A          518 SRSDVWSYGVTMWEALSYGQKP  539 (613)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cHHHHHHHHHHHHHHHHCCCCC
Confidence            99999999999999998 8876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.96  E-value=3.1e-30  Score=210.23  Aligned_cols=146  Identities=25%  Similarity=0.436  Sum_probs=128.5

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++.....   ..+++..+..++
T Consensus        43 iK~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~i~  117 (288)
T 3kfa_A           43 VKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR---QEVSAVVLLYMA  117 (288)
T ss_dssp             EEEECSCSTHHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCT---TTSCHHHHHHHH
T ss_pred             EEecCcCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhccc---CCccHhHHHHHH
Confidence            8888765444 5677  999999999999999999999999999999999999999999975332   258899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+.+..++.++|
T Consensus       118 ~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  194 (288)
T 3kfa_A          118 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD  194 (288)
T ss_dssp             HHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhh
Confidence            99999999999   8999999999999999876533                      3566799999999889999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      |||+|+++|+|++ |..|
T Consensus       195 i~slG~il~~ll~~g~~p  212 (288)
T 3kfa_A          195 VWAFGVLLWEIATYGMSP  212 (288)
T ss_dssp             HHHHHHHHHHHHTTSCCS
T ss_pred             HHHHHHHHHHHHhCCCCC
Confidence            9999999999999 7765

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.96  E-value=8.1e-30  Score=211.85  Aligned_cols=144  Identities=19%  Similarity=0.340  Sum_probs=123.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   ..+.  +|+.++++++||||+++++++..++..++||||++ |+|.+++.....    .+++..+..
T Consensus        32 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~  104 (324)
T 3mtl_A           32 LKEIRLEHEEGAPCTAI--REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGN----IINMHNVKL  104 (324)
T ss_dssp             EEEECC------CCCCC--CCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTT----CCCHHHHHH
T ss_pred             EEEEecccccccchhHH--HHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCC----CCCHHHHHH
Confidence            8888654433   3455  99999999999999999999999999999999997 599998876542    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccC-CCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITT-GNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~-~~~~~~  208 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||.+.+ ..++.+
T Consensus       105 ~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  181 (324)
T 3mtl_A          105 FLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQ  181 (324)
T ss_dssp             HHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTH
T ss_pred             HHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcH
Confidence            9999999999999   8999999999999999876543                     46888999999876 468999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+||++|+|++|+.|
T Consensus       182 ~DiwslG~il~~l~~g~~p  200 (324)
T 3mtl_A          182 IDMWGVGCIFYEMATGRPL  200 (324)
T ss_dssp             HHHHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999976

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=1.1e-29  Score=211.54  Aligned_cols=144  Identities=27%  Similarity=0.402  Sum_probs=127.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....     .+++..+.
T Consensus        55 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~  127 (331)
T 4aaa_A           55 IKKFLESDDDKMVKKIAM--REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN-----GLDYQVVQ  127 (331)
T ss_dssp             EEEEESCSSCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTT-----CCCHHHHH
T ss_pred             EEEEecCCCchHHHHHHH--HHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhcc-----CCCHHHHH
Confidence            8888665444    2345  89999999999999999999999999999999999999988876543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                     .|++.|+|||.+.+. .++.
T Consensus       128 ~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  204 (331)
T 4aaa_A          128 KYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGK  204 (331)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCT
T ss_pred             HHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcch
Confidence            99999999999999   8999999999999999876533                     478889999999775 6899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|+|++|++|
T Consensus       205 ~~Di~slG~il~~l~~g~~p  224 (331)
T 4aaa_A          205 AVDVWAIGCLVTEMFMGEPL  224 (331)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.3e-30  Score=213.80  Aligned_cols=145  Identities=24%  Similarity=0.395  Sum_probs=127.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   ..+.  +|+.++++++||||+++++++...+..++||||+++|+|.+++.....    .+++..+..
T Consensus        78 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~  151 (333)
T 1mqb_A           78 IKTLKAGYTEKQRVDFL--GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG----EFSVLQLVG  151 (333)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT----CSCHHHHHH
T ss_pred             EEEcCCCCCHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCC----CCCHHHHHH
Confidence            7887755433   3455  999999999999999999999999999999999999999999975432    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                        .+++.|+|||.+.+..++
T Consensus       152 i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  228 (333)
T 1mqb_A          152 MLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT  228 (333)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCC
T ss_pred             HHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCC
Confidence            9999999999999   8999999999999999876543                        235679999999988899


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++||||||+++|||++ |+.|
T Consensus       229 ~~~Di~slG~il~ellt~g~~p  250 (333)
T 1mqb_A          229 SASDVWSFGIVMWEVMTYGERP  250 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCT
T ss_pred             chhhhHHHHHHHHHHHcCCCCC
Confidence            99999999999999999 8876

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=6e-30  Score=208.16  Aligned_cols=144  Identities=23%  Similarity=0.376  Sum_probs=127.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+.+....     .+++..+.
T Consensus        36 vK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~-----~~~~~~~~  108 (284)
T 3kk8_A           36 AKIINTKKLSARDFQKLE--REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-----FYSEADAS  108 (284)
T ss_dssp             EEEEEGGGCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-----SCCHHHHH
T ss_pred             EEEeecccCCHHHHHHHH--HHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcC-----CCCHHHHH
Confidence            8887654433    3455  89999999999999999999999999999999999999998887543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------eecccCccccccccCCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------LIGTFGFIAPECITTGNCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------~~g~~~y~aPE~~~~~~~~  206 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.                       ..||+.|+|||.+.+..++
T Consensus       109 ~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (284)
T 3kk8_A          109 HCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYS  185 (284)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCC
Confidence            99999999999999   899999999999999976432                       1578889999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+|+++|+|++|+.|
T Consensus       186 ~~~Di~slG~~l~~l~~g~~p  206 (284)
T 3kk8_A          186 KPVDIWACGVILYILLVGYPP  206 (284)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             cccchHHHHHHHHHHHHCCCC
Confidence            999999999999999999876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.96  E-value=4.7e-31  Score=214.35  Aligned_cols=153  Identities=23%  Similarity=0.401  Sum_probs=128.5

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeC-CcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLET-EVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      +...+..  ||.++.....+.+.  +|+.++++++||||+++++++... +..++||||+++++|.+++.....   ..+
T Consensus        40 ~~~~~~~vavK~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~  114 (278)
T 1byg_A           40 GDYRGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVL  114 (278)
T ss_dssp             EEETTEEEEEEECCCCC--HHHH--HTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHH---HHC
T ss_pred             EEEcCCEEEEEEecchhHHHHHH--HHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhccc---ccC
Confidence            4444444  88887666556777  999999999999999999997654 478999999999999999975321   137


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                  .+++.|+|||.+.+..+
T Consensus       115 ~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  191 (278)
T 1byg_A          115 GGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF  191 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSCHHHHHHCCC
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCC
Confidence            88899999999999999999   8999999999999999877643                  36678999999988889


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++||||||+++|+|+| |+.|
T Consensus       192 ~~~~Di~slG~il~~l~t~g~~p  214 (278)
T 1byg_A          192 STKSDVWSFGILLWEIYSFGRVP  214 (278)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CchhcHHHHHHHHHHHHhCCCCC
Confidence            999999999999999998 8766

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.96  E-value=2.9e-30  Score=216.40  Aligned_cols=142  Identities=25%  Similarity=0.377  Sum_probs=124.6

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+....  ....  +|+.++.++ +||||+++++++.+++..|+||||+++|+|.+++....     .+++..+..++
T Consensus        52 vK~~~~~~--~~~~--~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~-----~~~~~~~~~~~  122 (342)
T 2qr7_A           52 VKIIDKSK--RDPT--EEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK-----FFSEREASAVL  122 (342)
T ss_dssp             EEEEETTT--CCCH--HHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCT-----TCCHHHHHHHH
T ss_pred             EEEEEccc--CChH--HHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcC-----CCCHHHHHHHH
Confidence            88886543  2345  899999888 89999999999999999999999999999999997654     68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-------------------------ceecccCccccccccCCCCCc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-------------------------KLIGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-------------------------~~~g~~~y~aPE~~~~~~~~~  207 (227)
                      .|++.||.|||   +.+++||||||+||++.+..                         ..+||+.|+|||++.+..++.
T Consensus       123 ~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  199 (342)
T 2qr7_A          123 FTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDA  199 (342)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCC
Confidence            99999999999   89999999999999974321                         115788999999998777899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+||++|+|++|..|
T Consensus       200 ~~DiwslG~il~ell~g~~P  219 (342)
T 2qr7_A          200 ACDIWSLGVLLYTMLTGYTP  219 (342)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCeeeHhHHHHHHhcCCCC
Confidence            99999999999999999987

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=5.7e-30  Score=207.84  Aligned_cols=145  Identities=24%  Similarity=0.375  Sum_probs=111.6

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++.....    ++++..+
T Consensus        41 vK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~  114 (278)
T 3cok_A           41 IKMIDKKAMYKAGMVQRVQ--NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK----PFSENEA  114 (278)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSS----CCCHHHH
T ss_pred             EEEeehhhhhhhhHHHHHH--HHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccC----CCCHHHH
Confidence            888754321     14566  999999999999999999999999999999999999999999986532    6899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||.+.+..++.
T Consensus       115 ~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  191 (278)
T 3cok_A          115 RHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGL  191 (278)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----------------------------
T ss_pred             HHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCc
Confidence            999999999999999   8999999999999999876533                     4788899999998888899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|++|+.|
T Consensus       192 ~~Di~slG~il~~l~~g~~p  211 (278)
T 3cok_A          192 ESDVWSLGCMFYTLLIGRPP  211 (278)
T ss_dssp             CTHHHHHHHHHHHHHHSSCS
T ss_pred             hhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999977

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3.7e-30  Score=218.16  Aligned_cols=145  Identities=23%  Similarity=0.419  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEee-CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....   +.|.  +|+.++++++||||++++++|.. ++..++||||+++|+|.+++.....    .+++..+.
T Consensus       122 vK~~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~  195 (373)
T 3c1x_A          122 VKSLNRITDIGEVSQFL--TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLI  195 (373)
T ss_dssp             EEECCSCSCSHHHHHHH--HHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTC----CCBHHHHH
T ss_pred             EEEcCCCCCHHHHHHHH--HHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhccc----CCCHHHHH
Confidence            6766544332   4566  99999999999999999999765 4578999999999999999976542    57889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~  204 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                         .+++.|+|||.+.+..
T Consensus       196 ~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  272 (373)
T 3c1x_A          196 GFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK  272 (373)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCC
Confidence            99999999999999   8999999999999999876543                         2456799999999889


Q ss_pred             CCchhhHHHHHHHHHHHHhC-CCC
Q 040292          205 CNEKSDVYSFGALLLELLTG-KKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg-~~p  227 (227)
                      ++.++||||||+++|||+|| .+|
T Consensus       273 ~~~~~DvwSlG~il~ellt~~~~p  296 (373)
T 3c1x_A          273 FTTKSDVWSFGVLLWELMTRGAPP  296 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CCcHHHHHHHHHHHHHHHhCcCCC
Confidence            99999999999999999994 443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=9.5e-30  Score=206.88  Aligned_cols=144  Identities=24%  Similarity=0.364  Sum_probs=127.6

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......        +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     .+++
T Consensus        35 vK~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~  107 (283)
T 3bhy_A           35 AKFIKKRRLSSSRRGVSREEIE--REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-----SLTE  107 (283)
T ss_dssp             EEEEEBCSSTTCSSSBCHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-----SCCH
T ss_pred             hHHhhhccccccccchHHHHHH--HHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcC-----CCCH
Confidence            8887654321        3466  99999999999999999999999999999999999999999997533     6889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----ce--------------------ecccCcccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----KL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----~~--------------------~g~~~y~aPE~~~  201 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||+++.++    .+                    .|++.|+|||.+.
T Consensus       108 ~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (283)
T 3bhy_A          108 DEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN  184 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceec
Confidence            999999999999999999   89999999999999998765    11                    4778899999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++|+||||+++|+|++|+.|
T Consensus       185 ~~~~~~~~Di~slG~il~~l~~g~~p  210 (283)
T 3bhy_A          185 YEPLGLEADMWSIGVITYILLSGASP  210 (283)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCCCcchhhhhHHHHHHHHHHCCCC
Confidence            88899999999999999999999876

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.96  E-value=2.5e-30  Score=212.13  Aligned_cols=145  Identities=28%  Similarity=0.452  Sum_probs=122.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...  ...++||||+++|+|.+++.....    .+++..+
T Consensus        55 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~  128 (302)
T 4e5w_A           55 VKSLKPESGGNHIADLK--KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN----KINLKQQ  128 (302)
T ss_dssp             EEEEC-----CCHHHHH--HHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTT----TCCHHHH
T ss_pred             EEEecccccchhHHHHH--HHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccc----cCCHHHH
Confidence            8888755433   4566  999999999999999999999876  568899999999999999954332    6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                        .||..|+|||.+.+..
T Consensus       129 ~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  205 (302)
T 4e5w_A          129 LKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSK  205 (302)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCC
Confidence            999999999999999   8999999999999999776533                        3556699999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|+||+|+++|+|++|..|
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~p  228 (302)
T 4e5w_A          206 FYIASDVWSFGVTLHELLTYCDS  228 (302)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCG
T ss_pred             CCcchhHHHHHHHHHHHHHccCC
Confidence            99999999999999999999765

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=3.8e-30  Score=211.95  Aligned_cols=149  Identities=21%  Similarity=0.350  Sum_probs=128.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||.+......   +.+.  +|+.+++++ +||||+++++++..++..++||||+++|+|.+++......           
T Consensus        58 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  135 (313)
T 1t46_A           58 VKMLKPSAHLTEREALM--SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM  135 (313)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC----------
T ss_pred             HHhcCcchhHHHHHHHH--HHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhccccccccccccccc
Confidence            8888765443   4566  999999999 9999999999999999999999999999999999754321           


Q ss_pred             --CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccC
Q 040292          139 --QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFG  193 (227)
Q Consensus       139 --~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~  193 (227)
                        ...++++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       .+++.
T Consensus       136 ~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  212 (313)
T 1t46_A          136 EDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK  212 (313)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGG
T ss_pred             ccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcce
Confidence              0124889999999999999999999   8999999999999999876543                       35567


Q ss_pred             ccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          194 FIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       194 y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |+|||.+.+..++.++||||||+++|+|+| |+.|
T Consensus       213 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  247 (313)
T 1t46_A          213 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP  247 (313)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             eeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence            999999988889999999999999999999 8765

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=7.5e-30  Score=223.59  Aligned_cols=143  Identities=29%  Similarity=0.401  Sum_probs=124.5

Q ss_pred             eEEEcCCCC----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLN----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+.....    .+.+.  +|+.++++++||||++++++|...+..++||||+++|+|.+.+....     ++++..+.
T Consensus        67 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~-----~~~~~~~~  139 (494)
T 3lij_A           67 IKIIRKTSVSTSSNSKLL--EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM-----KFNEVDAA  139 (494)
T ss_dssp             EEEEEC-----CTTHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-----SCCHHHHH
T ss_pred             EEEEeccccCchHHHHHH--HHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcC-----CCCHHHHH
Confidence            888765432    24556  99999999999999999999999999999999999999999886543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------eecccCccccccccCCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------LIGTFGFIAPECITTGNCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------~~g~~~y~aPE~~~~~~~~  206 (227)
                      .++.|++.||.|||   +.+++||||||+||+++..+.                       .+||+.|+|||++. ..++
T Consensus       140 ~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~  215 (494)
T 3lij_A          140 VIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYD  215 (494)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBC
T ss_pred             HHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCC
Confidence            99999999999999   899999999999999975321                       15899999999886 5689


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+||++|+|++|.+|
T Consensus       216 ~~~DiwslG~il~~ll~g~~p  236 (494)
T 3lij_A          216 EKCDVWSIGVILFILLAGYPP  236 (494)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             CchhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999987

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.96  E-value=9.4e-30  Score=218.76  Aligned_cols=132  Identities=25%  Similarity=0.376  Sum_probs=113.9

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.+|++++||||+++++++. .+..++||||+++|+|.+++....     .+++..+..++.|++.||.||| 
T Consensus       186 ~~~--~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH-  256 (419)
T 3i6u_A          186 NVE--TEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLH-  256 (419)
T ss_dssp             CHH--HHHHHHHHCCCTTBCCCCEEEE-SSEEEEEEECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHH--HHHHHHHhCCCCCEeeEEEEEe-cCceEEEEEcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHH-
Confidence            455  9999999999999999999975 456799999999999999987654     6899999999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCc-----------------------eecccCccccccccC---CCCCchhhHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDK-----------------------LIGTFGFIAPECITT---GNCNEKSDVYSFGALL  218 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~-----------------------~~g~~~y~aPE~~~~---~~~~~~~DvwS~G~il  218 (227)
                        +.+++||||||+||+++.++.                       .+||+.|+|||++..   ..++.++|||||||++
T Consensus       257 --~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il  334 (419)
T 3i6u_A          257 --ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL  334 (419)
T ss_dssp             --HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHH
T ss_pred             --HCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHH
Confidence              899999999999999975331                       258899999999853   5678899999999999


Q ss_pred             HHHHhCCCC
Q 040292          219 LELLTGKKG  227 (227)
Q Consensus       219 ~el~tg~~p  227 (227)
                      |+|++|++|
T Consensus       335 ~~lltg~~p  343 (419)
T 3i6u_A          335 FICLSGYPP  343 (419)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHHCCCC
Confidence            999999987

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=7.9e-30  Score=209.21  Aligned_cols=145  Identities=21%  Similarity=0.336  Sum_probs=123.8

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|.+......  +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++.....    .+++..+..+
T Consensus        49 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~  122 (302)
T 2j7t_A           49 AKVIETKSEEELEDYI--VEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR----GLTEPQIQVV  122 (302)
T ss_dssp             EEEEC----CCHHHHH--HHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTS----CCCHHHHHHH
T ss_pred             EEEecCCCHHHHHHHH--HHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhcc----CCCHHHHHHH
Confidence            7777654433  4566  999999999999999999999999999999999999999998865332    6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccc-----cCCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECI-----TTGNC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~-----~~~~~  205 (227)
                      +.|++.||.|||   +.+++||||||+||+++.++.+                     .|++.|+|||.+     ....+
T Consensus       123 ~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  199 (302)
T 2j7t_A          123 CRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY  199 (302)
T ss_dssp             HHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTT
T ss_pred             HHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCC
Confidence            999999999999   8999999999999999876543                     478889999998     35668


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||||+++|+|++|+.|
T Consensus       200 ~~~~Di~slG~il~~l~~g~~p  221 (302)
T 2j7t_A          200 DYKADIWSLGITLIEMAQIEPP  221 (302)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCT
T ss_pred             chhhhHHHHHHHHHHHhcCCCC
Confidence            8999999999999999999876

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=9.1e-30  Score=206.85  Aligned_cols=144  Identities=27%  Similarity=0.447  Sum_probs=127.7

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     ...+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....     .+++..+
T Consensus        39 vK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-----~~~~~~~  111 (279)
T 3fdn_A           39 LKVLFKAQLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRT  111 (279)
T ss_dssp             EEEEEHHHHHHHTCHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-----SCCHHHH
T ss_pred             EEEEeccccchhhHHHHHH--HHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcC-----CCCHHHH
Confidence            777754321     23466  99999999999999999999999999999999999999999987543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                   .|++.|+|||.+.+..++.++
T Consensus       112 ~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (279)
T 3fdn_A          112 ATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKV  188 (279)
T ss_dssp             HHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTH
T ss_pred             HHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccc
Confidence            999999999999999   9999999999999999876543                   578899999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||+|+++|+|++|+.|
T Consensus       189 Di~slG~il~~l~~g~~p  206 (279)
T 3fdn_A          189 DLWSLGVLCYEFLVGKPP  206 (279)
T ss_dssp             HHHHHHHHHHHHHHSSCT
T ss_pred             hhHhHHHHHHHHHHCCCC
Confidence            999999999999999976

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.96  E-value=9.4e-30  Score=211.88  Aligned_cols=143  Identities=20%  Similarity=0.299  Sum_probs=121.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    +.+.  +|+.++++++||||+++++++..++..++||||++ |+|.+++....     .+++..+.
T Consensus        64 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-----~~~~~~~~  135 (329)
T 3gbz_A           64 IKRIRLEHEEEGVPGTAI--REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNP-----DVSMRVIK  135 (329)
T ss_dssp             EEECCCCC--------CH--HHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCT-----TCCHHHHH
T ss_pred             EEEEcccccccccchhHH--HHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcC-----CCCHHHHH
Confidence            8888654433    3455  99999999999999999999999999999999998 59999997654     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-----ce---------------------ecccCccccccccCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-----KL---------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-----~~---------------------~g~~~y~aPE~~~~~  203 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++     .+                     .||+.|+|||++.+.
T Consensus       136 ~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~  212 (329)
T 3gbz_A          136 SFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS  212 (329)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTC
T ss_pred             HHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCC
Confidence            99999999999999   89999999999999995332     11                     468899999999875


Q ss_pred             C-CCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 N-CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~-~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      . ++.++|||||||++|+|++|+.|
T Consensus       213 ~~~~~~~DiwslG~il~ell~g~~p  237 (329)
T 3gbz_A          213 RHYSTSVDIWSIACIWAEMLMKTPL  237 (329)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            4 89999999999999999999876

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=6e-30  Score=208.82  Aligned_cols=144  Identities=22%  Similarity=0.404  Sum_probs=125.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   +.+.  +|+.++++++||||+++++++ ..+..++||||+++++|.+++.....    ++++..+..
T Consensus        42 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~  114 (287)
T 1u59_A           42 IKVLKQGTEKADTEEMM--REAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE----EIPVSNVAE  114 (287)
T ss_dssp             EEEECSSCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTT----TSCHHHHHH
T ss_pred             EEecCCccchhHHHHHH--HHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCc----cCCHHHHHH
Confidence            8888765433   4566  999999999999999999999 55678999999999999999975432    689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                        .+|+.|+|||.+.+..++
T Consensus       115 ~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  191 (287)
T 1u59_A          115 LLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS  191 (287)
T ss_dssp             HHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCC
Confidence            9999999999999   8999999999999999876532                        246779999999888899


Q ss_pred             chhhHHHHHHHHHHHHh-CCCC
Q 040292          207 EKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .++|+||||+++|+|++ |+.|
T Consensus       192 ~~~Di~slG~il~ellt~g~~p  213 (287)
T 1u59_A          192 SRSDVWSYGVTMWEALSYGQKP  213 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCT
T ss_pred             chhhHHHHHHHHHHHHcCCCCC
Confidence            99999999999999998 8876

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=1e-29  Score=211.19  Aligned_cols=149  Identities=21%  Similarity=0.384  Sum_probs=126.5

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----------C
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----------S  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----------~  138 (227)
                      ||.+......   +.+.  +|+.++.++ +||||+++++++...+..++||||+++|+|.+++.....           .
T Consensus        57 iK~~~~~~~~~~~~~~~--~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  134 (327)
T 1fvr_A           57 IKRMKEYASKDDHRDFA--GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  134 (327)
T ss_dssp             EEEEECC------CHHH--HHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTT
T ss_pred             eeeeccccchHHHHHHH--HHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhccccccccccccccc
Confidence            6777643322   4566  999999999 999999999999999999999999999999999976430           1


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPE  198 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE  198 (227)
                      ...++++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                    .+++.|+|||
T Consensus       135 ~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE  211 (327)
T 1fvr_A          135 TASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE  211 (327)
T ss_dssp             BSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHH
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeEEEcccCcCccccccccccCCCCCccccChh
Confidence            1126889999999999999999999   8999999999999999876433                    3567899999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+.+..++.++||||||+++|+|++ |+.|
T Consensus       212 ~~~~~~~~~~~Di~slG~il~ellt~g~~p  241 (327)
T 1fvr_A          212 SLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  241 (327)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             hhccccCCchhcchHHHHHHHHHHcCCCCC
Confidence            9988888999999999999999998 8876

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.3e-29  Score=207.37  Aligned_cols=145  Identities=24%  Similarity=0.358  Sum_probs=125.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcc-eeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVP-ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~-~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...+.. ++||||+.+|+|.+++.....    .+++..+.
T Consensus        54 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~  127 (298)
T 3pls_A           54 IKSLSRITEMQQVEAFL--REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR----NPTVKDLI  127 (298)
T ss_dssp             EEEETTCCSHHHHHHHH--HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTC----CCBHHHHH
T ss_pred             eeeccccccHHHHHHHH--HHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhcccc----CCCHHHHH
Confidence            7777654443   4566  999999999999999999999876655 899999999999999986442    67889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~  204 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                         .+++.|+|||.+.+..
T Consensus       128 ~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  204 (298)
T 3pls_A          128 SFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR  204 (298)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCC
Confidence            99999999999999   8999999999999999887543                         3566799999999889


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||||+++|+|++|..|
T Consensus       205 ~~~~~Di~slG~il~~l~~g~~~  227 (298)
T 3pls_A          205 FTTKSDVWSFGVLLWELLTRGAP  227 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCC
T ss_pred             CChhhchhhHHHHHHHHhhCCCC
Confidence            99999999999999999996544

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=1.3e-29  Score=207.37  Aligned_cols=144  Identities=22%  Similarity=0.323  Sum_probs=127.2

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     .+++..+
T Consensus        45 ~K~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~  117 (294)
T 2rku_A           45 GKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-----ALTEPEA  117 (294)
T ss_dssp             EEEEEGGGCCSHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-----SCCHHHH
T ss_pred             EEEechhhccCHHHHHHHH--HHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcC-----CCCHHHH
Confidence            7777544221     3456  89999999999999999999999999999999999999999887543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                     .|++.|+|||.+.+..++.
T Consensus       118 ~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  194 (294)
T 2rku_A          118 RYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF  194 (294)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCT
T ss_pred             HHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCc
Confidence            999999999999999   8999999999999999876533                     4788899999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+|+++|+|++|+.|
T Consensus       195 ~~Di~slG~~l~~l~~g~~p  214 (294)
T 2rku_A          195 EVDVWSIGCIMYTLLVGKPP  214 (294)
T ss_dssp             HHHHHHHHHHHHHHHHSSCT
T ss_pred             hhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=7.5e-30  Score=214.80  Aligned_cols=144  Identities=22%  Similarity=0.320  Sum_probs=125.1

Q ss_pred             eEEEcCCC------CcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNL------NTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~------~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++...      ..+.+.  +|+.+++++ +||||+++++++...+..++||||+++|+|.+++....     .+++.
T Consensus        87 vK~~~~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~  159 (355)
T 1vzo_A           87 MKVLKKATIVQKAKTTEHTR--TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-----RFTEH  159 (355)
T ss_dssp             EEEESEEEEEEEESSGGGCC--CHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS-----CCCHH
T ss_pred             EEEEeHHHhhhhhhHHHHHH--HHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcC-----CCCHH
Confidence            78876432      224566  999999999 79999999999999999999999999999999997543     68899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCC-
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTG-  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~-  203 (227)
                      .+..++.|++.||.|||   +.+++||||||+||+++.++.+                      +||+.|+|||++.+. 
T Consensus       160 ~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  236 (355)
T 1vzo_A          160 EVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD  236 (355)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCC
Confidence            99999999999999999   8999999999999999876532                      588999999999853 


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 -NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 -~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .++.++|||||||++|||++|+.|
T Consensus       237 ~~~~~~~DvwslG~il~ell~g~~p  261 (355)
T 1vzo_A          237 SGHDKAVDWWSLGVLMYELLTGASP  261 (355)
T ss_dssp             ---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCC
Confidence             478999999999999999999987

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.96  E-value=9.7e-30  Score=213.89  Aligned_cols=145  Identities=25%  Similarity=0.319  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-----CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-----HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-----H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+...... +.+.  +|+.+++.++     ||||+++++++...+..++||||+ +++|.+++.....   ..+++..
T Consensus        65 vK~~~~~~~~~~~~~--~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~---~~~~~~~  138 (360)
T 3llt_A           65 VKVVRNIKKYTRSAK--IEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY---NGFHIED  138 (360)
T ss_dssp             EEEECSCHHHHHHHH--HHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTT---CCCCHHH
T ss_pred             EEEeccchhhhhhhH--HHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCC---CCCCHHH
Confidence            8887643322 4555  8999999986     999999999999999999999999 8999999975432   2588899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-------------------------CCc---------------
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-------------------------NDK---------------  187 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-------------------------~~~---------------  187 (227)
                      +..++.|++.||+|||   +.+|+||||||+||+++.                         ++.               
T Consensus       139 ~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~  215 (360)
T 3llt_A          139 IKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY  215 (360)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC
Confidence            9999999999999999   999999999999999974                         221               


Q ss_pred             ---eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 ---LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 ---~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                         ..||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       216 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          216 HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence               2578899999999999999999999999999999999976

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.96  E-value=1.9e-29  Score=207.26  Aligned_cols=143  Identities=24%  Similarity=0.387  Sum_probs=128.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++...      ++++..+..
T Consensus        52 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~  123 (303)
T 3a7i_A           52 IKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIAT  123 (303)
T ss_dssp             EEEEETTTCSTTHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTS------CCCHHHHHH
T ss_pred             EEEecccccHHHHHHHH--HHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcC------CCCHHHHHH
Confidence            8888755433   4566  9999999999999999999999999999999999999999998642      688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ++.|++.||.|||   +.+++|+||||+||+++.++.+                     .|++.|+|||.+.+..++.++
T Consensus       124 ~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  200 (303)
T 3a7i_A          124 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKA  200 (303)
T ss_dssp             HHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHH
T ss_pred             HHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchh
Confidence            9999999999999   8999999999999999876543                     477889999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||||+++|+|++|+.|
T Consensus       201 Di~slG~il~~l~~g~~p  218 (303)
T 3a7i_A          201 DIWSLGITAIELARGEPP  218 (303)
T ss_dssp             HHHHHHHHHHHHHHSSCT
T ss_pred             hhHHHHHHHHHHccCCCC
Confidence            999999999999999876

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=6.3e-30  Score=215.72  Aligned_cols=130  Identities=18%  Similarity=0.271  Sum_probs=115.0

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeC----CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           90 NCIAFASQMSHKNILKFVGCCLET----EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      .|+..+..++||||+++++++...    ...++||||+ +++|.+++.....    .+++..+..++.|++.||.|||  
T Consensus        97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH--  169 (364)
T 3op5_A           97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAK----RFSRKTVLQLSLRILDILEYIH--  169 (364)
T ss_dssp             HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH--
Confidence            566677888999999999999775    3478999999 9999999976432    6899999999999999999999  


Q ss_pred             CCCCeEEecCCCCceeec--CCCce----------------------------ecccCccccccccCCCCCchhhHHHHH
Q 040292          166 FSRPIVFRDIKPFTTHVN--DNDKL----------------------------IGTFGFIAPECITTGNCNEKSDVYSFG  215 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~--~~~~~----------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G  215 (227)
                       +.+|+||||||+||+++  .++.+                            .||+.|+|||++.+..++.++||||||
T Consensus       170 -~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  248 (364)
T 3op5_A          170 -EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILG  248 (364)
T ss_dssp             -HTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHH
T ss_pred             -HCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHH
Confidence             89999999999999998  43322                            288999999999988899999999999


Q ss_pred             HHHHHHHhCCCC
Q 040292          216 ALLLELLTGKKG  227 (227)
Q Consensus       216 ~il~el~tg~~p  227 (227)
                      |++|||+||+.|
T Consensus       249 ~~l~el~~g~~P  260 (364)
T 3op5_A          249 YCMIQWLTGHLP  260 (364)
T ss_dssp             HHHHHHHHSCCT
T ss_pred             HHHHHHHhCCCC
Confidence            999999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.96  E-value=1.2e-29  Score=207.95  Aligned_cols=144  Identities=24%  Similarity=0.431  Sum_probs=123.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEee-CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLE-TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......   +.+.  +|+.++++++||||++++++|.. ++..++||||+++|+|.+++.....    .+++..+.
T Consensus        58 vk~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~  131 (298)
T 3f66_A           58 VKSLNRITDIGEVSQFL--TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLI  131 (298)
T ss_dssp             EEEETTCCSHHHHHHHH--HHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTC----CCCHHHHH
T ss_pred             EEecccCCCHHHHHHHH--HHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhccc----CCCHHHHH
Confidence            7777654443   4566  99999999999999999999754 4578899999999999999976442    67889999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccccccccCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~aPE~~~~~~  204 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                         .+|+.|+|||.+.+..
T Consensus       132 ~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  208 (298)
T 3f66_A          132 GFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK  208 (298)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCC
Confidence            99999999999999   8999999999999999877543                         3556799999999889


Q ss_pred             CCchhhHHHHHHHHHHHHhCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~  226 (227)
                      ++.++|+||+|+++|+|++|..
T Consensus       209 ~~~~~Di~slG~il~~l~~~~~  230 (298)
T 3f66_A          209 FTTKSDVWSFGVLLWELMTRGA  230 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CChHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999544

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.96  E-value=7.1e-30  Score=210.78  Aligned_cols=144  Identities=18%  Similarity=0.293  Sum_probs=124.2

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     ++++..+
T Consensus        64 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~  136 (309)
T 2h34_A           64 LKLMSETLSSDPVFRTRMQ--REARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG-----PLAPPRA  136 (309)
T ss_dssp             EEECGGGGGGSHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHC-----SCCHHHH
T ss_pred             EEecCcccccCHHHHHHHH--HHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcC-----CCCHHHH
Confidence            8887654332     3466  99999999999999999999999999999999999999999997543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                      .|++.|+|||.+.+..++
T Consensus       137 ~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  213 (309)
T 2h34_A          137 VAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHAT  213 (309)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC----------------CCGGGCCGGGTCC----
T ss_pred             HHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCC
Confidence            999999999999999   8999999999999999876543                      477889999999988899


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||||+++|+|++|+.|
T Consensus       214 ~~~Di~slG~il~~l~~g~~p  234 (309)
T 2h34_A          214 YRADIYALTCVLYECLTGSPP  234 (309)
T ss_dssp             CCCHHHHHHHHHHHHHHSSCS
T ss_pred             chHhHHHHHHHHHHHHHCCCC
Confidence            999999999999999999976

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=1.2e-29  Score=211.68  Aligned_cols=144  Identities=22%  Similarity=0.323  Sum_probs=127.3

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      +|.+......     +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....     .+++..+
T Consensus        71 ~K~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~l~~~~~  143 (335)
T 2owb_A           71 GKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK-----ALTEPEA  143 (335)
T ss_dssp             EEEEEGGGCCSHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHC-----SCCHHHH
T ss_pred             EEEechhhhcCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccC-----CCCHHHH
Confidence            7777544221     3556  99999999999999999999999999999999999999999887543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +++++||||||+||+++.++.+                     .|++.|+|||.+.+..++.
T Consensus       144 ~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  220 (335)
T 2owb_A          144 RYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF  220 (335)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCT
T ss_pred             HHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCc
Confidence            999999999999999   8999999999999999876532                     4788899999998888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||||+++|+|++|+.|
T Consensus       221 ~~Di~slG~il~~l~~g~~p  240 (335)
T 2owb_A          221 EVDVWSIGCIMYTLLVGKPP  240 (335)
T ss_dssp             HHHHHHHHHHHHHHHHSSCT
T ss_pred             hhhHHHHHHHHHHHHHCcCC
Confidence            99999999999999999876

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.96  E-value=7.7e-30  Score=222.01  Aligned_cols=141  Identities=23%  Similarity=0.321  Sum_probs=121.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||++......    +.+.  +|+.+|+.++||||+++++++....      ..|+||||+++ +|.+.+..       .+
T Consensus        92 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~-------~l  161 (464)
T 3ttj_A           92 IKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQM-------EL  161 (464)
T ss_dssp             EEEEESGGGSHHHHHHHH--HHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTS-------CC
T ss_pred             EEEECccccChHHHHHHH--HHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhh-------cC
Confidence            8888754322    3455  9999999999999999999997653      46999999975 57776653       47


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~  203 (227)
                      ++..+..++.|++.||+|||   +.+|+||||||+||+++.++.+                    +||+.|+|||++.+.
T Consensus       162 ~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  238 (464)
T 3ttj_A          162 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM  238 (464)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCC
Confidence            88999999999999999999   8999999999999999977543                    588999999999999


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++||||+||++|||++|+.|
T Consensus       239 ~~~~~~DiwSlG~il~ell~g~~p  262 (464)
T 3ttj_A          239 GYKENVDIWSVGCIMGEMVRHKIL  262 (464)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCHHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999999976

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.96  E-value=1.1e-29  Score=206.78  Aligned_cols=144  Identities=26%  Similarity=0.406  Sum_probs=127.7

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.++++++||||+++++++..++..++||||+++++|.+++....     .+++..+
T Consensus        44 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~  116 (284)
T 2vgo_A           44 LKVLFKSQLEKEGVEHQLR--REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG-----RFDEQRS  116 (284)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-----SCCHHHH
T ss_pred             EEEEcccccchHHHHHHHH--HHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcC-----CCCHHHH
Confidence            78775431     124566  99999999999999999999999999999999999999999997543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                   .|++.|+|||.+.+..++.++
T Consensus       117 ~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  193 (284)
T 2vgo_A          117 ATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKV  193 (284)
T ss_dssp             HHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTH
T ss_pred             HHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCccc
Confidence            999999999999999   9999999999999999876543                   478889999999988899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |+||||+++|+|++|+.|
T Consensus       194 Di~slG~il~~l~~g~~p  211 (284)
T 2vgo_A          194 DLWCAGVLCYEFLVGMPP  211 (284)
T ss_dssp             HHHHHHHHHHHHHHSSCT
T ss_pred             chhhHHHHHHHHHHCCCC
Confidence            999999999999999876

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=1.3e-29  Score=222.51  Aligned_cols=132  Identities=33%  Similarity=0.499  Sum_probs=120.2

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhh
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHV  164 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~  164 (227)
                      .+.  +|+.+|++++||||+++++++..+...++||||+++|+|.+++....     .+++..+..++.|++.||.||| 
T Consensus        92 ~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH-  163 (504)
T 3q5i_A           92 EIY--NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLH-  163 (504)
T ss_dssp             HHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHH--HHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH-
Confidence            455  99999999999999999999999999999999999999999886543     6899999999999999999999 


Q ss_pred             cCCCCeEEecCCCCceeecCCCc-----------------------eecccCccccccccCCCCCchhhHHHHHHHHHHH
Q 040292          165 GFSRPIVFRDIKPFTTHVNDNDK-----------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLEL  221 (227)
Q Consensus       165 ~~~~~i~H~dlkp~nil~~~~~~-----------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el  221 (227)
                        +.+++||||||+||+++.++.                       .+||+.|+|||++. ..++.++||||+||++|+|
T Consensus       164 --~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~l  240 (504)
T 3q5i_A          164 --KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYIL  240 (504)
T ss_dssp             --HTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHH
T ss_pred             --HCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHH
Confidence              899999999999999986642                       15889999999986 4689999999999999999


Q ss_pred             HhCCCC
Q 040292          222 LTGKKG  227 (227)
Q Consensus       222 ~tg~~p  227 (227)
                      ++|.+|
T Consensus       241 l~g~~p  246 (504)
T 3q5i_A          241 LCGYPP  246 (504)
T ss_dssp             HHSSCS
T ss_pred             HhCCCC
Confidence            999987

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.96  E-value=8.7e-30  Score=213.01  Aligned_cols=136  Identities=18%  Similarity=0.366  Sum_probs=120.4

Q ss_pred             ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhh------hcCCCCCCCcccCHHHHHHHHHHHHH
Q 040292           84 EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADR------IHDPNGSQLEPFLMKHRLKVAMEIAN  157 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~~i~~  157 (227)
                      +.+.  +|+.++++++||||+++++++...+..++||||+++++|.++      +....   ...+++..+..++.|++.
T Consensus        88 ~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~  162 (348)
T 2pml_X           88 DDFK--NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLN  162 (348)
T ss_dssp             HHHH--HHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHH
T ss_pred             HHHH--HHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHH
Confidence            4456  999999999999999999999999999999999999999998      54321   137899999999999999


Q ss_pred             HHHHhhhcCC-CCeEEecCCCCceeecCCCce-------------------ecccCccccccccCC-CCCc-hhhHHHHH
Q 040292          158 AVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTG-NCNE-KSDVYSFG  215 (227)
Q Consensus       158 gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~-~~~~-~~DvwS~G  215 (227)
                      ||.|||   + .+++||||+|+||+++.++.+                   .|++.|+|||.+.+. .++. ++||||||
T Consensus       163 ~l~~lH---~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG  239 (348)
T 2pml_X          163 SFSYIH---NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLG  239 (348)
T ss_dssp             HHHHHH---HTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHH
T ss_pred             HHHHHh---ccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHH
Confidence            999999   7 999999999999999876543                   478889999999877 5666 99999999


Q ss_pred             HHHHHHHhCCCC
Q 040292          216 ALLLELLTGKKG  227 (227)
Q Consensus       216 ~il~el~tg~~p  227 (227)
                      +++|+|++|+.|
T Consensus       240 ~il~~l~~g~~p  251 (348)
T 2pml_X          240 ICLYVMFYNVVP  251 (348)
T ss_dssp             HHHHHHHHSSCS
T ss_pred             HHHHHHHhCCCC
Confidence            999999999876

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=6.2e-30  Score=223.62  Aligned_cols=143  Identities=26%  Similarity=0.420  Sum_probs=125.1

Q ss_pred             eEEEcCCC----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNL----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+....    ..+.+.  +|+.++++++||||+++++++...+..++||||+++|+|.+.+....     .+++..+.
T Consensus        52 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~  124 (486)
T 3mwu_A           52 VKVINKASAKNKDTSTIL--REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-----RFSEHDAA  124 (486)
T ss_dssp             EEEEEHHHHBCSCHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-----SCCHHHHH
T ss_pred             EEEEecccccchHHHHHH--HHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcC-----CCCHHHHH
Confidence            88875322    224566  99999999999999999999999999999999999999999886543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC---c--------------------eecccCccccccccCCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND---K--------------------LIGTFGFIAPECITTGNCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~---~--------------------~~g~~~y~aPE~~~~~~~~  206 (227)
                      .++.|++.||.|||   +.+|+||||||+||+++..+   .                    .+||+.|+|||++.+ .++
T Consensus       125 ~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~  200 (486)
T 3mwu_A          125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD  200 (486)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCC
T ss_pred             HHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCC
Confidence            99999999999999   89999999999999995432   1                    158999999999875 589


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+||++|+|++|++|
T Consensus       201 ~~~DiwslG~il~~ll~g~~p  221 (486)
T 3mwu_A          201 EKCDVWSAGVILYILLSGTPP  221 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCS
T ss_pred             chhhHHHHHHHHHHHHhCCCC
Confidence            999999999999999999987

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=2.1e-30  Score=229.19  Aligned_cols=152  Identities=26%  Similarity=0.379  Sum_probs=128.7

Q ss_pred             eeecCCC---eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcc
Q 040292           67 GFLQDHP---ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP  142 (227)
Q Consensus        67 ~~~~~~~---vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~  142 (227)
                      |...+..   ||.++..... ++|.  +|+.+|++++||||+++++++.+ +..++||||+++|+|.+++.....   ..
T Consensus       286 ~~~~~~~~vavK~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~---~~  359 (535)
T 2h8h_A          286 GTWNGTTRVAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---KY  359 (535)
T ss_dssp             EEETTTEEEEEEEECTTSSCHHHHH--HHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHH---TT
T ss_pred             EEECCCceEEEEEeCCCCCCHHHHH--HHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCC---CC
Confidence            4444433   8888765443 5677  99999999999999999999876 678999999999999999974211   15


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccc
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECI  200 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~  200 (227)
                      +++..+..++.|++.||.|||   +++++||||||+||+++.++.+                      .++..|+|||++
T Consensus       360 l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~  436 (535)
T 2h8h_A          360 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA  436 (535)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcccccCHHHh
Confidence            788999999999999999999   8999999999999999876433                      245679999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ....++.++|||||||++|||++ |+.|
T Consensus       437 ~~~~~~~~sDvwSlGv~l~el~t~g~~P  464 (535)
T 2h8h_A          437 LYGRFTIKSDVWSFGILLTELTTKGRVP  464 (535)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHTTTTCCS
T ss_pred             ccCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            98899999999999999999999 7765

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.96  E-value=1.6e-29  Score=219.38  Aligned_cols=140  Identities=24%  Similarity=0.355  Sum_probs=119.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC-----CcceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET-----EVPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||++......    +.+.  +|+.+|++++||||+++++++...     ...|+||||+. ++|.+++....     .++
T Consensus        83 iK~i~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-----~l~  154 (458)
T 3rp9_A           83 IKKILRVFEDLIDCKRIL--REIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPV-----YLT  154 (458)
T ss_dssp             EEEECSTTSSHHHHHHHH--HHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSC-----CCC
T ss_pred             EEEechhhcCHHHHHHHH--HHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCC-----CCC
Confidence            8888654333    3455  999999999999999999999543     46899999984 79999997653     689


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------------
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------------  188 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------------  188 (227)
                      +..+..++.|++.||.|||   +.+|+||||||+|||++.++.+                                    
T Consensus       155 ~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (458)
T 3rp9_A          155 ELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFP  231 (458)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC--------------
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCcccccccccccc
Confidence            9999999999999999999   8999999999999999876432                                    


Q ss_pred             ------------ecccCcccccccc-CCCCCchhhHHHHHHHHHHHHhC
Q 040292          189 ------------IGTFGFIAPECIT-TGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 ------------~g~~~y~aPE~~~-~~~~~~~~DvwS~G~il~el~tg  224 (227)
                                  +||++|+|||++. ...++.++|||||||++|||++|
T Consensus       232 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          232 HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             -------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence                        3588899999864 55699999999999999999995

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=6.2e-30  Score=212.82  Aligned_cols=149  Identities=20%  Similarity=0.365  Sum_probs=126.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC---------CCC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG---------SQL  140 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~---------~~~  140 (227)
                      ||.+......   +.+.  +|+.+++++ +||||+++++++..++..++||||+++|+|.+++.....         ...
T Consensus        81 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  158 (333)
T 2i1m_A           81 VKMLKSTAHADEKEALM--SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN  158 (333)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------
T ss_pred             HHhcccccChHHHHHHH--HHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccc
Confidence            7777665433   3566  999999999 899999999999999999999999999999999864210         001


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccc
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAP  197 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aP  197 (227)
                      .++++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       .+|+.|+||
T Consensus       159 ~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  235 (333)
T 2i1m_A          159 STASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP  235 (333)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred             cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCH
Confidence            25788999999999999999999   8999999999999999865432                       356679999


Q ss_pred             ccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          198 ECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       198 E~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |.+.+..++.++||||||+++|+|+| |..|
T Consensus       236 E~~~~~~~~~~~Di~slG~il~el~t~g~~p  266 (333)
T 2i1m_A          236 ESIFDCVYTVQSDVWSYGILLWEIFSLGLNP  266 (333)
T ss_dssp             HHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             HHhccCCCChHHHHHHHHHHHHHHHcCCCCC
Confidence            99988889999999999999999998 7765

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.96  E-value=7.1e-30  Score=207.35  Aligned_cols=145  Identities=25%  Similarity=0.446  Sum_probs=125.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+...... +.+.  +|+.++++++||||+++++++. .+..++||||+++++|.+++.....   ..+++..+..++
T Consensus        42 vK~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~i~  115 (279)
T 1qpc_A           42 VKSLKQGSMSPDAFL--AEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMA  115 (279)
T ss_dssp             EEEECTTSSCHHHHH--HHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHH---HTCCHHHHHHHH
T ss_pred             EEEecCCcccHHHHH--HHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCC---CCCCHHHHHHHH
Confidence            8888765433 5677  9999999999999999999986 4568999999999999999975321   157889999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+.+..++.++|
T Consensus       116 ~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  192 (279)
T 1qpc_A          116 AQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD  192 (279)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhh
Confidence            99999999999   8999999999999999876543                      2456799999998888999999


Q ss_pred             HHHHHHHHHHHHh-CCCC
Q 040292          211 VYSFGALLLELLT-GKKG  227 (227)
Q Consensus       211 vwS~G~il~el~t-g~~p  227 (227)
                      |||||+++|+|++ |+.|
T Consensus       193 i~slG~il~el~~~g~~p  210 (279)
T 1qpc_A          193 VWSFGILLTEIVTHGRIP  210 (279)
T ss_dssp             HHHHHHHHHHHHTTTCCS
T ss_pred             hHHHHHHHHHHHhCCCCC
Confidence            9999999999999 7765

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=3e-29  Score=204.84  Aligned_cols=143  Identities=27%  Similarity=0.405  Sum_probs=122.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      +|.+......    +.+.  +|+.++++++||||+++++++..    ....++||||+++++|.+++....     .+++
T Consensus        56 ~k~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~  128 (290)
T 1t4h_A           56 WCELQDRKLTKSERQRFK--EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-----VMKI  128 (290)
T ss_dssp             EEEEEGGGSCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-----SCCH
T ss_pred             EEEecchhhCHHHHHHHH--HHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHcc-----CCCH
Confidence            6777644332    3466  99999999999999999999875    345789999999999999997543     6889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCceeec-CCCce-------------------ecccCccccccccCC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRP--IVFRDIKPFTTHVN-DNDKL-------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~--i~H~dlkp~nil~~-~~~~~-------------------~g~~~y~aPE~~~~~  203 (227)
                      ..+..++.|++.||.|||   +.+  ++||||||+||+++ .++.+                   .||+.|+|||.+. .
T Consensus       129 ~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~-~  204 (290)
T 1t4h_A          129 KVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-E  204 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG-T
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHh-c
Confidence            999999999999999999   888  99999999999997 44322                   4888999999886 4


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++||||+|+++|+|++|+.|
T Consensus       205 ~~~~~~Di~slG~~l~~l~~g~~p  228 (290)
T 1t4h_A          205 KYDESVDVYAFGMCMLEMATSEYP  228 (290)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCCcchHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999876

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=2.1e-29  Score=214.28  Aligned_cols=142  Identities=24%  Similarity=0.393  Sum_probs=120.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCC-CcccceeEEEEeeCC--cceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMS-HKNILKFVGCCLETE--VPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||++......    +.+.  +|+.++.++. ||||+++++++...+  ..|+||||++ ++|.+++...      .+++.
T Consensus        39 iK~i~~~~~~~~~~~~~~--~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~------~~~~~  109 (388)
T 3oz6_A           39 VKKIFDAFQNSTDAQRTF--REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRAN------ILEPV  109 (388)
T ss_dssp             EEEECC--CCHHHHHHHH--HHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHT------CCCHH
T ss_pred             EEEecccccChHHHHHHH--HHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcC------CCCHH
Confidence            8888654332    3444  9999999996 999999999997654  6799999997 6899988752      57888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------------------------
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------------------------  188 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------------------------  188 (227)
                      .+..++.|++.||+|||   +.+|+||||||+||+++.++.+                                      
T Consensus       110 ~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (388)
T 3oz6_A          110 HKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI  186 (388)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC------------
T ss_pred             HHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccccccccccccccccccccccc
Confidence            99999999999999999   8999999999999999876422                                      


Q ss_pred             ----ecccCccccccccC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ----IGTFGFIAPECITT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ----~g~~~y~aPE~~~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                          +||++|+|||++.+ ..++.++||||+||++|||++|++|
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~p  230 (388)
T 3oz6_A          187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI  230 (388)
T ss_dssp             ---CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCC
Confidence                47888999999976 5689999999999999999999976

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.2e-29  Score=211.24  Aligned_cols=144  Identities=23%  Similarity=0.389  Sum_probs=123.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.+......   +.+.  +|+.++++++||||+++++++..+. .++|+||+++|+|.+++.....    .+++..+..
T Consensus        49 iK~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~----~~~~~~~~~  121 (327)
T 3lzb_A           49 IKELREATSPKANKEIL--DEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD----NIGSQYLLN  121 (327)
T ss_dssp             EEEECCCSSCCCHHHHH--HHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTT----CCCHHHHHH
T ss_pred             EEeeccccCHHHHHHHH--HHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCC----CCCHHHHHH
Confidence            5555443322   4566  9999999999999999999998654 7899999999999999976442    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                       .+|+.|+|||.+.+..++.
T Consensus       122 i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  198 (327)
T 3lzb_A          122 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH  198 (327)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCCh
Confidence            9999999999999   8999999999999999876543                       2466799999999989999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++||||||+++|||++ |+.|
T Consensus       199 ~~Di~slG~il~ell~~g~~p  219 (327)
T 3lzb_A          199 QSDVWSYGVTVWELMTFGSKP  219 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCT
T ss_pred             HHHHHHHHHHHHHHHHCCCCC
Confidence            9999999999999999 8876

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=1.8e-29  Score=205.08  Aligned_cols=148  Identities=17%  Similarity=0.280  Sum_probs=123.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......    .++.  +|+..+.++ +||||+++++++..++..++||||+++++|.+++...... ...+++..+
T Consensus        41 iK~~~~~~~~~~~~~~~~--~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~  117 (289)
T 1x8b_A           41 IKRSKKPLAGSVDEQNAL--REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRI-MSYFKEAEL  117 (289)
T ss_dssp             EEEEECCCTTSHHHHHHH--HHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHH-TCCCCHHHH
T ss_pred             EEEecccccccHHHHHHH--HHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhccc-ccCCCHHHH
Confidence            8888765332    3444  999999999 9999999999999999999999999999999999753110 015889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-------------------c-----------------eeccc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-------------------K-----------------LIGTF  192 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-------------------~-----------------~~g~~  192 (227)
                      ..++.|++.||.|||   +++++||||||+||+++.++                   .                 ..||+
T Consensus       118 ~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~  194 (289)
T 1x8b_A          118 KDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDS  194 (289)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSCCCCCCG
T ss_pred             HHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCccccCCCc
Confidence            999999999999999   89999999999999998433                   1                 14788


Q ss_pred             CccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          193 GFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       193 ~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .|+|||.+.+. .++.++||||||+++|+|++|.+|
T Consensus       195 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~  230 (289)
T 1x8b_A          195 RFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL  230 (289)
T ss_dssp             GGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             cccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCC
Confidence            89999999766 466899999999999999999864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=1.6e-29  Score=205.36  Aligned_cols=144  Identities=28%  Similarity=0.461  Sum_probs=124.6

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEee----------------CCcceeEeecccCCChhhhhcCCCC
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLE----------------TEVPILVFEFVACGTLADRIHDPNG  137 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----------------~~~~~lV~E~~~~gsL~~~l~~~~~  137 (227)
                      ||.+....  +.+.  +|+.++++++||||+++++++..                ....++||||+++++|.+++.....
T Consensus        41 vK~~~~~~--~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~  116 (284)
T 2a19_B           41 IKRVKYNN--EKAE--REVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG  116 (284)
T ss_dssp             EEEEECCS--GGGH--HHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGG
T ss_pred             EEEecccc--HHHH--HHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccC
Confidence            88886542  4566  99999999999999999998864                3457899999999999999964321


Q ss_pred             CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccc
Q 040292          138 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAP  197 (227)
Q Consensus       138 ~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aP  197 (227)
                         ..+++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+                    .|++.|+||
T Consensus       117 ---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aP  190 (284)
T 2a19_B          117 ---EKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSP  190 (284)
T ss_dssp             ---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCH
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcchhheeccccccccccCCcccccCh
Confidence               26889999999999999999999   8999999999999999876532                    478899999


Q ss_pred             ccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          198 ECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       198 E~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |.+.+..++.++||||||+++|+|++|..|
T Consensus       191 E~~~~~~~~~~~Di~slG~il~~l~~~~~~  220 (284)
T 2a19_B          191 EQISSQDYGKEVDLYALGLILAELLHVCDT  220 (284)
T ss_dssp             HHHHCSCCCTHHHHHHHHHHHHHHHSCCSS
T ss_pred             hhhccCCCcchhhhHHHHHHHHHHHhcCCc
Confidence            999988899999999999999999999865

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.96  E-value=1.2e-29  Score=211.48  Aligned_cols=149  Identities=22%  Similarity=0.429  Sum_probs=127.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||.+......   +.+.  +|+.+++++ +||||+++++++...+..++||||+++|+|.+++......           
T Consensus        72 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  149 (334)
T 2pvf_A           72 VKMLKDDATEKDLSDLV--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV  149 (334)
T ss_dssp             EEECCTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC-----
T ss_pred             EeeeccCCcHHHHHHHH--HHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhcccccccccccccc
Confidence            7887755433   3456  999999999 9999999999999999999999999999999999764321           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       .+++.|+
T Consensus       150 ~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~  226 (334)
T 2pvf_A          150 PEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWM  226 (334)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGC
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCccccee
Confidence            0124889999999999999999999   8999999999999999876543                       2456799


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||.+.+..++.++||||||+++|+|++ |..|
T Consensus       227 aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  259 (334)
T 2pvf_A          227 APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP  259 (334)
T ss_dssp             CHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             ChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCC
Confidence            9999988889999999999999999999 8765

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=2.1e-29  Score=208.20  Aligned_cols=145  Identities=17%  Similarity=0.194  Sum_probs=121.1

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||++......  .....++|+..+.++ +||||++++++|.+++..++||||+ +++|.+++.....    ++++..+..
T Consensus        87 vK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~----~l~~~~~~~  161 (311)
T 3p1a_A           87 VKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGA----SLPEAQVWG  161 (311)
T ss_dssp             EEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCS----CCCHHHHHH
T ss_pred             EEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCC----CCCHHHHHH
Confidence            8887654333  222223666666555 9999999999999999999999999 6799998875432    689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.|++.||+|||   +.+++||||||+||+++.++.+                    .||+.|+|||++.+ .++.++|
T Consensus       162 i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~D  237 (311)
T 3p1a_A          162 YLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAAD  237 (311)
T ss_dssp             HHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHH
T ss_pred             HHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhh
Confidence            9999999999999   8999999999999999865533                    47899999998875 7899999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      ||||||++|||++|..|
T Consensus       238 iwslG~il~el~~g~~~  254 (311)
T 3p1a_A          238 VFSLGLTILEVACNMEL  254 (311)
T ss_dssp             HHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            99999999999999653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.96  E-value=1.1e-29  Score=210.34  Aligned_cols=149  Identities=21%  Similarity=0.409  Sum_probs=126.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----CCCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----SQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----~~~~~l~~  145 (227)
                      ||.+......   ..+.  +|+.++++++||||+++++++..++..++||||+++|+|.+++.....     ....++++
T Consensus        60 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  137 (322)
T 1p4o_A           60 IKTVNEAASMRERIEFL--NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL  137 (322)
T ss_dssp             EEECCTTSCHHHHHHHH--HHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred             EEecccccCHHHHHHHH--HHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCH
Confidence            7877655433   3455  999999999999999999999999999999999999999999864210     01125688


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..+..++.|++.||.|||   +++++||||||+||+++.++.+                       .+++.|+|||.+.+
T Consensus       138 ~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  214 (322)
T 1p4o_A          138 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  214 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhcc
Confidence            999999999999999999   8999999999999999887543                       34677999999988


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..++.++||||||+++|+|++ |..|
T Consensus       215 ~~~~~~~Di~slG~il~el~~~g~~p  240 (322)
T 1p4o_A          215 GVFTTYSDVWSFGVVLWEIATLAEQP  240 (322)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred             CCCCchhhHHHHHHHHHHHHhcCCCc
Confidence            889999999999999999999 6665

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.3e-29  Score=214.24  Aligned_cols=142  Identities=23%  Similarity=0.368  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||++......    +.+.  +|+.+|++++||||+++++++...+      ..|+||||+ +++|.+++...      .+
T Consensus        55 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~------~l  125 (367)
T 1cm8_A           55 IKKLYRPFQSELFAKRAY--RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE------KL  125 (367)
T ss_dssp             EEECSSTTSSHHHHHHHH--HHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHC------CC
T ss_pred             EEEeCccccCHHHHHHHH--HHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcC------CC
Confidence            8888654333    3455  9999999999999999999997653      459999999 78999998752      58


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                  ++|+.|+|||++.+ ..
T Consensus       126 ~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~  202 (367)
T 1cm8_A          126 GEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMR  202 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTC
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCC
Confidence            89999999999999999999   8999999999999999887543                  57889999999877 57


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||+||++|||++|++|
T Consensus       203 ~~~~~DiwslG~il~ell~g~~p  225 (367)
T 1cm8_A          203 YTQTVDIWSVGCIMAEMITGKTL  225 (367)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CChhhhHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999976

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.96  E-value=1.4e-29  Score=209.17  Aligned_cols=152  Identities=20%  Similarity=0.335  Sum_probs=127.3

Q ss_pred             eeecCCC-eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           67 GFLQDHP-ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        67 ~~~~~~~-vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      +...+.. ||.+......    +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++.....    
T Consensus        52 ~~~~~~~avk~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~----  125 (319)
T 2y4i_B           52 GRWHGEVAIRLIDIERDNEDQLKAFK--REVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI----  125 (319)
T ss_dssp             EEESSSEEEEECCCCSCCCCCCCCCC--TTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCC----
T ss_pred             EEEcCeEEEEEeecCCCCHHHHHHHH--HHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCC----
Confidence            4444434 8887654322    4566  999999999999999999999999999999999999999999976442    


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIA  196 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~a  196 (227)
                      .+++..+..++.|++.||.|||   +.+++||||||+||++++....                         .|++.|+|
T Consensus       126 ~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~a  202 (319)
T 2y4i_B          126 VLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLA  202 (319)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCCSGGGGTSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccCCCcccccC
Confidence            6888999999999999999999   8999999999999999843211                         37788999


Q ss_pred             cccccC---------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          197 PECITT---------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       197 PE~~~~---------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||.+..         ..++.++||||||+++|+|++|+.|
T Consensus       203 PE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p  242 (319)
T 2y4i_B          203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP  242 (319)
T ss_dssp             HHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             hHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCC
Confidence            999864         3478999999999999999999876

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=7e-30  Score=229.91  Aligned_cols=143  Identities=24%  Similarity=0.398  Sum_probs=124.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    +++.  +|+.+|++++||||++++++|. .+..++||||+++|+|.+++....     .+++..+.
T Consensus       401 vK~~~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~-----~l~~~~~~  472 (635)
T 4fl3_A          401 VKILKNEANDPALKDELL--AEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNR-----HVKDKNII  472 (635)
T ss_dssp             EEEECGGGGCGGGHHHHH--HHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTEEHHHHHHHCT-----TCCHHHHH
T ss_pred             EEEeccccCCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCCCHHHHHhhCC-----CCCHHHHH
Confidence            8888754332    4566  9999999999999999999996 456889999999999999997543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||+|||   +++|+||||||+||+++.++.+                        .+|+.|+|||++.+..+
T Consensus       473 ~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~  549 (635)
T 4fl3_A          473 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF  549 (635)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCC
Confidence            99999999999999   8999999999999999876543                        24567999999998899


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++|||||||++|||++ |+.|
T Consensus       550 ~~~sDvwSlGv~l~ellt~G~~P  572 (635)
T 4fl3_A          550 SSKSDVWSFGVLMWEAFSYGQKP  572 (635)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCC
Confidence            999999999999999998 8876

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=211.73  Aligned_cols=129  Identities=21%  Similarity=0.247  Sum_probs=117.6

Q ss_pred             hHHHHHhcCCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           90 NCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      +|+..++.++||||+++++++..    ....++||||+ +++|.+++....     .+++..+..++.|++.||.|||  
T Consensus        97 ~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH--  168 (345)
T 2v62_A           97 KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIH--  168 (345)
T ss_dssp             HHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH--
Confidence            78889999999999999999988    66789999999 899999997643     6899999999999999999999  


Q ss_pred             CCCCeEEecCCCCceeecCCC--ce----------------------------ecccCccccccccCCCCCchhhHHHHH
Q 040292          166 FSRPIVFRDIKPFTTHVNDND--KL----------------------------IGTFGFIAPECITTGNCNEKSDVYSFG  215 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~~~~--~~----------------------------~g~~~y~aPE~~~~~~~~~~~DvwS~G  215 (227)
                       +.+++||||||+||+++.++  .+                            .||+.|+|||++.+..++.++||||||
T Consensus       169 -~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG  247 (345)
T 2v62_A          169 -ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILG  247 (345)
T ss_dssp             -HTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHH
T ss_pred             -hCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHH
Confidence             89999999999999998654  21                            478899999999988899999999999


Q ss_pred             HHHHHHHhCCCC
Q 040292          216 ALLLELLTGKKG  227 (227)
Q Consensus       216 ~il~el~tg~~p  227 (227)
                      |++|||++|+.|
T Consensus       248 ~il~ell~g~~p  259 (345)
T 2v62_A          248 YCMLRWLCGKLP  259 (345)
T ss_dssp             HHHHHHHHSSCT
T ss_pred             HHHHHHHhCCCC
Confidence            999999999987

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.96  E-value=2.2e-29  Score=205.55  Aligned_cols=147  Identities=25%  Similarity=0.351  Sum_probs=124.4

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...+..++||||+++|+|.+++...... ...+++..+..
T Consensus        52 iK~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~  128 (285)
T 3is5_A           52 IKTINKDRSQVPMEQIE--AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAE  128 (285)
T ss_dssp             EEEEEGGGCCSCHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHH-TCCCCHHHHHH
T ss_pred             EEEeeccccchhHHHHH--HHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhc-ccCCCHHHHHH
Confidence            7877654433   4566  9999999999999999999999999999999999999999988532100 02688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC---Cc--------------------eecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN---DK--------------------LIGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~---~~--------------------~~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.+   +.                    ..||+.|+|||.+. ..++.
T Consensus       129 i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~  204 (285)
T 3is5_A          129 LMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTF  204 (285)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCH
T ss_pred             HHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCc
Confidence            9999999999999   8999999999999999542   21                    15788999999885 56899


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+|+++|+|++|+.|
T Consensus       205 ~~Di~slG~il~~ll~g~~p  224 (285)
T 3is5_A          205 KCDIWSAGVVMYFLLTGCLP  224 (285)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCeehHHHHHHHHHhCCCC
Confidence            99999999999999999877

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=8.5e-30  Score=213.31  Aligned_cols=143  Identities=23%  Similarity=0.336  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCC--cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSH--KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H--~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......    +.+.  +|+.+|.+++|  |||+++++++..++..++|||+ .+++|.+++....     .+++..
T Consensus        38 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~~~~-----~~~~~~  109 (343)
T 3dbq_A           38 IKYVNLEEADNQTLDSYR--NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKK-----SIDPWE  109 (343)
T ss_dssp             EEEEECTTCCHHHHHHHH--HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEEHHHHHHHSC-----CCCHHH
T ss_pred             EEEeeccccchHHHHHHH--HHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCHHHHHHhcC-----CCCHHH
Confidence            8888755433    4566  99999999976  9999999999999999999995 5789999997653     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----------------------ceecccCccccccccC---
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----------------------KLIGTFGFIAPECITT---  202 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----------------------~~~g~~~y~aPE~~~~---  202 (227)
                      +..++.|++.||.|||   +.+|+||||||+||++++..                      ..+||+.|+|||++.+   
T Consensus       110 ~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  186 (343)
T 3dbq_A          110 RKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS  186 (343)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccc
Confidence            9999999999999999   89999999999999997431                      1258999999999864   


Q ss_pred             --------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 --------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 --------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                              ..++.++|||||||++|||++|+.|
T Consensus       187 ~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  219 (343)
T 3dbq_A          187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP  219 (343)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             cccccccccCCCchhhHHHHHHHHHHHHhCCCc
Confidence                    5688999999999999999999987

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=1.5e-29  Score=211.42  Aligned_cols=149  Identities=28%  Similarity=0.324  Sum_probs=122.8

Q ss_pred             eEEEcCCC-----Cc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC--------
Q 040292           74 ISEFGDNL-----NT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS--------  138 (227)
Q Consensus        74 vK~~~~~~-----~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~--------  138 (227)
                      ||.+....     ..  +.+.  +|+.++++++||||+++++++.+.+..++||||+++|+|.+++......        
T Consensus        56 iK~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~  133 (345)
T 3hko_A           56 IKIMNKNKIRQINPKDVERIK--TEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMD  133 (345)
T ss_dssp             EEEEEHHHHHC---CHHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEE
T ss_pred             EeehhhhhhcccCHHHHHHHH--HHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccc
Confidence            77775431     11  4566  9999999999999999999999999999999999999999988521000        


Q ss_pred             ---------------------------CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC--ce-
Q 040292          139 ---------------------------QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KL-  188 (227)
Q Consensus       139 ---------------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~--~~-  188 (227)
                                                 ....+++..+..++.|++.||+|||   +.+++||||||+||+++.++  .+ 
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~k  210 (345)
T 3hko_A          134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIK  210 (345)
T ss_dssp             EECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEE
T ss_pred             cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEecCCCceEE
Confidence                                       0113456778889999999999999   89999999999999997654  11 


Q ss_pred             ------------------------ecccCccccccccC--CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ------------------------IGTFGFIAPECITT--GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ------------------------~g~~~y~aPE~~~~--~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                              .||+.|+|||.+..  ..++.++||||||+++|||++|+.|
T Consensus       211 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~p  275 (345)
T 3hko_A          211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP  275 (345)
T ss_dssp             ECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             EeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                                    47788999999965  5688999999999999999999987

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=1.2e-29  Score=208.02  Aligned_cols=149  Identities=23%  Similarity=0.340  Sum_probs=117.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCC---CCCCCcccCHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDP---NGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~---~~~~~~~l~~~~  147 (227)
                      ||.+......   +++.  +|+.++++++||||+++++++...+..++||||+++++|.+++...   .......+++..
T Consensus        45 iK~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  122 (303)
T 2vwi_A           45 IKRINLEKCQTSMDELL--KEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST  122 (303)
T ss_dssp             EECCC------------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHH
T ss_pred             EEEEEhhhcchhHHHHH--HHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHH
Confidence            7777644322   4566  9999999999999999999999999999999999999999988631   000112688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------------ecccCcccccccc
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------------~g~~~y~aPE~~~  201 (227)
                      +..++.|++.||.|||   +.+++||||||+||+++.++.+                          .||+.|+|||.+.
T Consensus       123 ~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (303)
T 2vwi_A          123 IATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME  199 (303)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhc
Confidence            9999999999999999   8999999999999999876532                          4778899999986


Q ss_pred             C-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 T-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      . ..++.++||||||+++|+|++|+.|
T Consensus       200 ~~~~~~~~~Di~slG~il~~l~~g~~p  226 (303)
T 2vwi_A          200 QVRGYDFKADIWSFGITAIELATGAAP  226 (303)
T ss_dssp             HHHCCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             cccCCCchhhHHHHHHHHHHHHhCCCC
Confidence            5 4689999999999999999999876

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=1e-29  Score=210.68  Aligned_cols=149  Identities=19%  Similarity=0.364  Sum_probs=120.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcc------eeEeecccCCChhhhhcCCCC-CCCcc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVP------ILVFEFVACGTLADRIHDPNG-SQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~------~lV~E~~~~gsL~~~l~~~~~-~~~~~  142 (227)
                      ||.++.....    +.+.  +|+.++++++||||+++++++......      ++||||+++|+|.+++..... .....
T Consensus        56 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~  133 (323)
T 3qup_A           56 VKMLKADIIASSDIEEFL--REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN  133 (323)
T ss_dssp             EEEC------CHHHHHHH--HHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCC
T ss_pred             EEEecccccCHHHHHHHH--HHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccc
Confidence            7877654322    4566  999999999999999999999877655      899999999999998854221 11125


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcccccc
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPEC  199 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~  199 (227)
                      +++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       .+++.|+|||.
T Consensus       134 ~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~  210 (323)
T 3qup_A          134 LPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES  210 (323)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchh
Confidence            889999999999999999999   8999999999999999887543                       24567999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.+..++.++|||||||++|+|++ |+.|
T Consensus       211 ~~~~~~~~~~Di~slG~il~ell~~g~~p  239 (323)
T 3qup_A          211 LADNLYTVHSDVWAFGVTMWEIMTRGQTP  239 (323)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             hcCCCCCCccchhhHHHHHHHHHhCCCCC
Confidence            998889999999999999999999 7765

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.96  E-value=6.2e-30  Score=212.52  Aligned_cols=145  Identities=23%  Similarity=0.346  Sum_probs=125.7

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++..  .+..++||||+++++|.+++....    ..+++..+.
T Consensus        57 vK~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~  130 (327)
T 3lxl_A           57 VKQLQHSGPDQQRDFQ--REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR----ARLDASRLL  130 (327)
T ss_dssp             EEEESSCCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHG----GGCCHHHHH
T ss_pred             EEEeccCCHHHHHHHH--HHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcc----cCCCHHHHH
Confidence            8888765433  4566  99999999999999999999874  456889999999999999997533    268999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                        .|++.|+|||.+.+..+
T Consensus       131 ~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  207 (327)
T 3lxl_A          131 LYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF  207 (327)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCC
Confidence            99999999999999   8999999999999999876543                        35666999999988888


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||||+++|+|++|+.|
T Consensus       208 ~~~~Di~slG~il~~ll~g~~p  229 (327)
T 3lxl_A          208 SRQSDVWSFGVVLYELFTYCDK  229 (327)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCG
T ss_pred             ChHHhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999865

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.96  E-value=1.8e-29  Score=209.18  Aligned_cols=143  Identities=27%  Similarity=0.462  Sum_probs=125.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...  ...++||||+++|+|.+++...      .+++..+
T Consensus        65 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~------~~~~~~~  136 (318)
T 3lxp_A           65 VKALKADAGPQHRSGWK--QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH------SIGLAQL  136 (318)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGS------CCCHHHH
T ss_pred             EEEeccccChHHHHHHH--HHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhC------CCCHHHH
Confidence            8888766443   3566  999999999999999999999874  5678999999999999999753      4788999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                        .++..|+|||.+.+..
T Consensus       137 ~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  213 (318)
T 3lxp_A          137 LLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK  213 (318)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCC
Confidence            999999999999999   8999999999999999887643                        3556699999998888


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||||+++|+|++|..|
T Consensus       214 ~~~~~Di~slG~il~~ll~g~~p  236 (318)
T 3lxp_A          214 FYYASDVWSFGVTLYELLTHCDS  236 (318)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCG
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCc
Confidence            89999999999999999999765

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=3.8e-29  Score=208.05  Aligned_cols=146  Identities=21%  Similarity=0.284  Sum_probs=126.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......    ..+.  +|+.++.++ .||||+++++++...+..++||||+++|+|.+++.....   ..+++..+
T Consensus        59 vK~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~  133 (327)
T 3lm5_A           59 AKFLKKRRRGQDCRAEIL--HEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELA---EMVSENDV  133 (327)
T ss_dssp             EEEEESEETTEECHHHHH--HHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC----CCCCHHHH
T ss_pred             EEEEehhhcchHHHHHHH--HHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcc---cCCCHHHH
Confidence            8887654333    3455  999999999 569999999999999999999999999999999865321   26889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC---CCce--------------------ecccCccccccccCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND---NDKL--------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~---~~~~--------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.   ++.+                    .||+.|+|||.+.+..+
T Consensus       134 ~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  210 (327)
T 3lm5_A          134 IRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPI  210 (327)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCC
Confidence            999999999999999   899999999999999987   3221                    58889999999998899


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||||+++|+|++|+.|
T Consensus       211 ~~~~DiwslG~il~~ll~g~~p  232 (327)
T 3lm5_A          211 TTATDMWNIGIIAYMLLTHTSP  232 (327)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999987

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.96  E-value=9.8e-30  Score=207.97  Aligned_cols=143  Identities=24%  Similarity=0.413  Sum_probs=122.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +++.  +|+.++++++||||+++++++ ..+..++||||+++++|.+++....     .+++..+.
T Consensus        49 vK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~  120 (291)
T 1xbb_A           49 VKILKNEANDPALKDELL--AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-----HVKDKNII  120 (291)
T ss_dssp             EEEEC-----CHHHHHHH--HHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCT-----TCCHHHHH
T ss_pred             EEeecccccCHHHHHHHH--HHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCc-----CCCHHHHH
Confidence            8888755332    4566  999999999999999999999 5677899999999999999997643     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                        .+++.|+|||.+.+..+
T Consensus       121 ~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  197 (291)
T 1xbb_A          121 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF  197 (291)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCC
Confidence            99999999999999   8999999999999999876532                        23467999999988888


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++||||||+++|+|++ |+.|
T Consensus       198 ~~~~Di~slG~il~~l~~~g~~p  220 (291)
T 1xbb_A          198 SSKSDVWSFGVLMWEAFSYGQKP  220 (291)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             ChhhhHHHHHHHHHHHHhcCCCC
Confidence            999999999999999999 8876

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=1e-29  Score=206.69  Aligned_cols=144  Identities=22%  Similarity=0.362  Sum_probs=124.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++.+ +..++||||+++++|.+++.....    .+++..+..
T Consensus        45 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~----~~~~~~~~~  117 (281)
T 3cc6_A           45 VKTCKKDCTLDNKEKFM--SEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKN----SLKVLTLVL  117 (281)
T ss_dssp             EEECCTTSCHHHHHHHH--HHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHTT----TCCHHHHHH
T ss_pred             EEecccccCchHHHHHH--HHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhccc----cCCHHHHHH
Confidence            7777655332   4566  99999999999999999999864 567899999999999999975432    588999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++.+                      .+++.|+|||.+.+..++.+
T Consensus       118 ~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  194 (281)
T 3cc6_A          118 YSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA  194 (281)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCch
Confidence            9999999999999   8999999999999999876533                      34567999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +||||||+++|+|++ |+.|
T Consensus       195 ~Di~slG~il~~llt~g~~p  214 (281)
T 3cc6_A          195 SDVWMFAVCMWEILSFGKQP  214 (281)
T ss_dssp             HHHHHHHHHHHHHHTTTCCT
T ss_pred             hccHHHHHHHHHHHhCCCCC
Confidence            999999999999998 8876

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.96  E-value=4.9e-29  Score=209.02  Aligned_cols=144  Identities=19%  Similarity=0.298  Sum_probs=122.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC--------CcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET--------EVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~--------~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.+......    ..+.  +|+.++++++||||+++++++...        +..++||||++ ++|.+.+.....    
T Consensus        47 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~----  119 (351)
T 3mi9_A           47 LKKVLMENEKEGFPITAL--REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLV----  119 (351)
T ss_dssp             EEECCCSSCSSSSCHHHH--HHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCS-EEHHHHHHCTTS----
T ss_pred             EEEEecccccccchHHHH--HHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccC-CCHHHHHhhccC----
Confidence            8887654433    2445  999999999999999999999873        45789999997 488877765432    


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIA  196 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~a  196 (227)
                      .+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                         .||+.|+|
T Consensus       120 ~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~a  196 (351)
T 3mi9_A          120 KFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP  196 (351)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccC
Confidence            6889999999999999999999   8999999999999999876533                         46888999


Q ss_pred             cccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          197 PECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       197 PE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||++.+. .++.++|||||||++|+|++|++|
T Consensus       197 PE~~~~~~~~~~~~DiwslG~il~ell~g~~p  228 (351)
T 3mi9_A          197 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPI  228 (351)
T ss_dssp             HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             chhhcCCCCCCcHhHHHHHHHHHHHHHhCCCC
Confidence            9998764 579999999999999999999876

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=2.2e-29  Score=205.72  Aligned_cols=147  Identities=28%  Similarity=0.415  Sum_probs=125.8

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++......  ..+++..+..+
T Consensus        52 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~  127 (295)
T 2clq_A           52 IKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP--LKDNEQTIGFY  127 (295)
T ss_dssp             EEEEECCCC---HHHH--HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCC--CTTCHHHHHHH
T ss_pred             EEEccCCchHHHHHHH--HHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccC--CCccHHHHHHH
Confidence            8888765433  4566  9999999999999999999999999999999999999999999754321  24678888899


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-CCce---------------------ecccCccccccccCCC--CCc
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKL---------------------IGTFGFIAPECITTGN--CNE  207 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-~~~~---------------------~g~~~y~aPE~~~~~~--~~~  207 (227)
                      +.|++.||.|||   +.+++|+||||+||+++. ++.+                     .|++.|+|||.+....  ++.
T Consensus       128 ~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  204 (295)
T 2clq_A          128 TKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK  204 (295)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSH
T ss_pred             HHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCc
Confidence            999999999999   899999999999999986 4322                     4778899999987643  789


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||||+++|+|++|+.|
T Consensus       205 ~~Di~slG~il~~l~~g~~p  224 (295)
T 2clq_A          205 AADIWSLGCTIIEMATGKPP  224 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHCCCC
Confidence            99999999999999999877

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.96  E-value=1.1e-29  Score=208.01  Aligned_cols=149  Identities=23%  Similarity=0.415  Sum_probs=119.4

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhc--CCCcccceeEEEEeeC----CcceeEeecccCCChhhhhcCCCCC
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQ--MSHKNILKFVGCCLET----EVPILVFEFVACGTLADRIHDPNGS  138 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~  138 (227)
                      +..++..  ||.+.... ...+.  +|.+++..  ++||||+++++++...    ...++||||+++|+|.+++...   
T Consensus        27 ~~~~~~~vavK~~~~~~-~~~~~--~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---  100 (301)
T 3q4u_A           27 GSWQGENVAVKIFSSRD-EKSWF--RETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT---  100 (301)
T ss_dssp             EEETTEEEEEEEECGGG-HHHHH--HHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC---
T ss_pred             EEECCEEEEEEEecccc-chhhH--HHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc---
Confidence            4444444  88886432 23444  56555554  8999999999997653    3578999999999999999642   


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcC-----CCCeEEecCCCCceeecCCCce-------------------------
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGF-----SRPIVFRDIKPFTTHVNDNDKL-------------------------  188 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~-----~~~i~H~dlkp~nil~~~~~~~-------------------------  188 (227)
                         .+++..+..++.|++.||+|||...     +++++||||||+||+++.++.+                         
T Consensus       101 ---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  177 (301)
T 3q4u_A          101 ---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR  177 (301)
T ss_dssp             ---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCC
T ss_pred             ---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccccc
Confidence               6889999999999999999999422     5789999999999999876532                         


Q ss_pred             ecccCccccccccCC------CCCchhhHHHHHHHHHHHHhC
Q 040292          189 IGTFGFIAPECITTG------NCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~------~~~~~~DvwS~G~il~el~tg  224 (227)
                      .||+.|+|||++.+.      .++.++|||||||++|||+||
T Consensus       178 ~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             CCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence            578899999999876      345799999999999999999

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=1.4e-29  Score=208.78  Aligned_cols=149  Identities=19%  Similarity=0.399  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCC-cceeEeecccCCChhhhhcCCCCCC---------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETE-VPILVFEFVACGTLADRIHDPNGSQ---------  139 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~---------  139 (227)
                      ||.+......   +.+.  +|+.++.++ +||||+++++++...+ ..++||||+++|+|.+++.......         
T Consensus        62 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  139 (316)
T 2xir_A           62 VKMLKEGATHSEHRALM--SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  139 (316)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC------
T ss_pred             EEecccCCCcHHHHHHH--HHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchh
Confidence            8888765443   3456  999999999 7999999999998755 4899999999999999998654210         


Q ss_pred             --CcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCc
Q 040292          140 --LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGF  194 (227)
Q Consensus       140 --~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y  194 (227)
                        ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       .||+.|
T Consensus       140 ~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y  216 (316)
T 2xir_A          140 LYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  216 (316)
T ss_dssp             -CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGG
T ss_pred             hhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceee
Confidence              012788999999999999999999   8999999999999999865432                       466789


Q ss_pred             cccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          195 IAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       195 ~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +|||.+.+..++.++||||||+++|+|+| |..|
T Consensus       217 ~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p  250 (316)
T 2xir_A          217 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP  250 (316)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cCchhhccccccchhHHHHHHHHHHHHHhCCCCC
Confidence            99999998889999999999999999998 8776

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=5.4e-29  Score=205.46  Aligned_cols=149  Identities=23%  Similarity=0.427  Sum_probs=121.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCc-----ceeEeecccCCChhhhhcCCC-CCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEV-----PILVFEFVACGTLADRIHDPN-GSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~~lV~E~~~~gsL~~~l~~~~-~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++...+.     .++||||+++|+|.+++.... ......+
T Consensus        67 vK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~  144 (313)
T 3brb_A           67 VKTMKLDNSSQREIEEFL--SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI  144 (313)
T ss_dssp             EEEC---CCCHHHHHHHH--HHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCC
T ss_pred             EEEEeccccchhHHHHHH--HHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccC
Confidence            8887655333    3466  99999999999999999999987553     489999999999999984221 1111368


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECI  200 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~  200 (227)
                      ++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                       .+++.|+|||.+
T Consensus       145 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  221 (313)
T 3brb_A          145 PLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL  221 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhh
Confidence            99999999999999999999   9999999999999999887543                       245679999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .+..++.++||||||+++|+|++ |..|
T Consensus       222 ~~~~~~~~~Di~slG~il~el~~~g~~p  249 (313)
T 3brb_A          222 ADRVYTSKSDVWAFGVTMWEIATRGMTP  249 (313)
T ss_dssp             HSSCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             cCCCccchhhhHHHHHHHHHHHhcCCCC
Confidence            98889999999999999999999 7665

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=5.2e-29  Score=205.23  Aligned_cols=145  Identities=19%  Similarity=0.316  Sum_probs=122.7

Q ss_pred             eEEEcCCCC-------cccccchhHHHHHhcC---CCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCC
Q 040292           74 ISEFGDNLN-------TEEYYCFNCIAFASQM---SHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGS  138 (227)
Q Consensus        74 vK~~~~~~~-------~~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~  138 (227)
                      ||.+.....       ...+.  +|+.+++++   +||||++++++|....     ..++||||+. ++|.+++..... 
T Consensus        39 vK~~~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-  114 (308)
T 3g33_A           39 LKSVRVPNGGGGGGGLPISTV--REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPP-  114 (308)
T ss_dssp             EEEEEEECCCTTSSCCCHHHH--HHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCT-
T ss_pred             EEEEecccccccccccchhHH--HHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccC-
Confidence            888764321       12444  888887777   4999999999998765     4789999997 699999986542 


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPE  198 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE  198 (227)
                        ..+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+                    .||+.|+|||
T Consensus       115 --~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE  189 (308)
T 3g33_A          115 --PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE  189 (308)
T ss_dssp             --TCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHH
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccCCccccccccCch
Confidence              24899999999999999999999   8999999999999999876543                    5788999999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+.+..++.++||||+||++|+|++|++|
T Consensus       190 ~~~~~~~~~~~DiwslG~il~~l~~g~~p  218 (308)
T 3g33_A          190 VLLQSTYATPVDMWSVGCIFAEMFRRKPL  218 (308)
T ss_dssp             HHHTSCCCSTHHHHHHHHHHHHTTTSSCS
T ss_pred             HHcCCCCCchHHHHHHHHHHHHHHhCCCC
Confidence            99988999999999999999999999976

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.96  E-value=4.1e-29  Score=205.89  Aligned_cols=148  Identities=24%  Similarity=0.356  Sum_probs=126.9

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++...... ...+++..+
T Consensus        62 vK~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~  138 (310)
T 2wqm_A           62 LKKVQIFDLMDAKARADCI--KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ-KRLIPERTV  138 (310)
T ss_dssp             EEEECTTSSCCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHT-TCCCCHHHH
T ss_pred             EEeeehhhccCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhccc-ccCCCHHHH
Confidence            8888753322     3456  9999999999999999999999999999999999999999988642100 026889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+                     .|++.|+|||.+.+..++.
T Consensus       139 ~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  215 (310)
T 2wqm_A          139 WKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNF  215 (310)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------------------CCSSCCHHHHTTCCCCH
T ss_pred             HHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCc
Confidence            999999999999999   8999999999999999876543                     4778899999999888999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||||+++|+|++|+.|
T Consensus       216 ~~Dv~slG~il~~l~~g~~p  235 (310)
T 2wqm_A          216 KSDIWSLGCLLYEMAALQSP  235 (310)
T ss_dssp             HHHHHHHHHHHHHHHHSSCT
T ss_pred             hhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=1.1e-29  Score=206.08  Aligned_cols=148  Identities=24%  Similarity=0.374  Sum_probs=124.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|.+......    +.+.  +|+.++++++||||+++++++..  ....++||||+++++|.+++...... ...+++..
T Consensus        36 iK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~  112 (279)
T 2w5a_A           36 WKELDYGSMTEAEKQMLV--SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE-RQYLDEEF  112 (279)
T ss_dssp             EEEEECTTCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHT-TCCCCHHH
T ss_pred             EEEEEcccCCHHHHHHHH--HHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhccc-CCCCCHHH
Confidence            8888755432    3456  99999999999999999998854  56789999999999999998643211 12588999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCC-----eEEecCCCCceeecCCCce---------------------ecccCcccccccc
Q 040292          148 RLKVAMEIANAVAYLHVGFSRP-----IVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT  201 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~-----i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~  201 (227)
                      +..++.|++.||.|||   +.+     ++||||||+||+++.++.+                     .|++.|+|||.+.
T Consensus       113 ~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  189 (279)
T 2w5a_A          113 VLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMN  189 (279)
T ss_dssp             HHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccccccCCCccccChHHhc
Confidence            9999999999999999   767     9999999999999877643                     4778899999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++||||||+++|+|++|+.|
T Consensus       190 ~~~~~~~~Di~slG~il~~l~~g~~p  215 (279)
T 2w5a_A          190 RMSYNEKSDIWSLGCLLYELCALMPP  215 (279)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            88899999999999999999999876

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.96  E-value=8.7e-30  Score=217.33  Aligned_cols=147  Identities=23%  Similarity=0.351  Sum_probs=123.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCC--cceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETE--VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...+  ..++||||+++|+|.+++......  ..+++..+
T Consensus        39 iK~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--~~l~~~~~  114 (396)
T 4eut_A           39 IKVFNNISFLRPVDVQM--REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNA--YGLPESEF  114 (396)
T ss_dssp             EEEECGGGGGSCHHHHH--HHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGT--TCCCHHHH
T ss_pred             EEEeccccccchHHHHH--HHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcc--cCCCHHHH
Confidence            8888754332   4555  9999999999999999999998765  679999999999999999764321  13889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceee----cCCCc--------------------eecccCccccccccC--
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV----NDNDK--------------------LIGTFGFIAPECITT--  202 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~----~~~~~--------------------~~g~~~y~aPE~~~~--  202 (227)
                      ..++.|++.||+|||   +.+++||||||+||++    +.++.                    ..||+.|+|||++..  
T Consensus       115 ~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  191 (396)
T 4eut_A          115 LIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV  191 (396)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccc
Confidence            999999999999999   8999999999999998    44322                    158899999998864  


Q ss_pred             ------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 ------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                            ..++.++|||||||++|||++|+.|
T Consensus       192 ~~~~~~~~~~~~~DiwSlG~il~el~tg~~P  222 (396)
T 4eut_A          192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLP  222 (396)
T ss_dssp             C--CHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccccCCCcHHHHHHHHHHHHHHHHCCCC
Confidence                  4567899999999999999999987

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3.7e-29  Score=209.67  Aligned_cols=144  Identities=24%  Similarity=0.284  Sum_probs=122.0

Q ss_pred             eEEEcCCCCc-------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.+......       +.+.  +|+.++++++||||+++++++...+..++||||+++ +|.+++.....    .+++.
T Consensus        40 vK~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~----~~~~~  112 (346)
T 1ua2_A           40 IKKIKLGHRSEAKDGINRTAL--REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSL----VLTPS  112 (346)
T ss_dssp             EEEC------------CTHHH--HHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCS----SCCSS
T ss_pred             EEEEecCCcchhhhhhhHHHH--HHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCc----CCCHH
Confidence            8887643221       3455  999999999999999999999999999999999985 89888876432    67888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-C
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-N  204 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~  204 (227)
                      .+..++.|++.||.|||   +.+++||||||+||+++.++.+                     .||+.|+|||.+.+. .
T Consensus       113 ~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  189 (346)
T 1ua2_A          113 HIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARM  189 (346)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSC
T ss_pred             HHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCC
Confidence            99999999999999999   8999999999999999876543                     578889999999764 4


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|||||||++|+|++|.+|
T Consensus       190 ~~~~~DiwslG~il~ell~g~~~  212 (346)
T 1ua2_A          190 YGVGVDMWAVGCILAELLLRVPF  212 (346)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCchhhhHhHHHHHHHHHHCCCC
Confidence            89999999999999999999876

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=3.4e-29  Score=213.40  Aligned_cols=143  Identities=22%  Similarity=0.330  Sum_probs=122.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCC--CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMS--HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......    +.+.  +|+.+|.+++  ||||+++++++..++..++||| +.+++|.+++....     .+++..
T Consensus        85 iK~~~~~~~~~~~~~~~~--~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~-----~~~~~~  156 (390)
T 2zmd_A           85 IKYVNLEEADNQTLDSYR--NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-----SIDPWE  156 (390)
T ss_dssp             EEEEECTTCCHHHHHHHH--HHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCS-----SCCHHH
T ss_pred             EEEEecccccHHHHHHHH--HHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcC-----CCCHHH
Confidence            8888755433    4566  9999999996  5999999999999999999999 56789999997653     678889


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----------------------ceecccCccccccccC---
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----------------------KLIGTFGFIAPECITT---  202 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----------------------~~~g~~~y~aPE~~~~---  202 (227)
                      +..++.|++.||.|||   +.+|+||||||+||++++..                      ..+||+.|+|||++.+   
T Consensus       157 ~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  233 (390)
T 2zmd_A          157 RKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS  233 (390)
T ss_dssp             HHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC--
T ss_pred             HHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccc
Confidence            9999999999999999   99999999999999996421                      1258999999999865   


Q ss_pred             --------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 --------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 --------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                              ..++.++|||||||++|||++|+.|
T Consensus       234 ~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~P  266 (390)
T 2zmd_A          234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP  266 (390)
T ss_dssp             ----------CCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             cccccccccCCCChhhHHHHHHHHHHHHHCCCc
Confidence                    3588999999999999999999987

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=3.8e-29  Score=206.61  Aligned_cols=148  Identities=23%  Similarity=0.362  Sum_probs=123.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++..    ....++||||+++|+|.+++...... ..++++..
T Consensus        59 vK~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~  135 (317)
T 2buj_A           59 LKRILCHEQQDREEAQ--READMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDK-GNFLTEDQ  135 (317)
T ss_dssp             EEEEEESSHHHHHHHH--HHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTT-TCCCCHHH
T ss_pred             EEEEecCCHHHHHHHH--HHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhc-CCCCCHHH
Confidence            8877654333  4566  99999999999999999999973    34678999999999999988752111 12689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------ecccCcccc
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------IGTFGFIAP  197 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------~g~~~y~aP  197 (227)
                      +..++.|++.||.|||   +.+++||||||+||+++.++.+                              .||+.|+||
T Consensus       136 ~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  212 (317)
T 2buj_A          136 ILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAP  212 (317)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCG
T ss_pred             HHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCH
Confidence            9999999999999999   8999999999999999876543                              247889999


Q ss_pred             ccccCCC---CCchhhHHHHHHHHHHHHhCCCC
Q 040292          198 ECITTGN---CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       198 E~~~~~~---~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      |.+....   ++.++||||||+++|+|++|+.|
T Consensus       213 E~~~~~~~~~~~~~~Di~slG~il~el~~g~~p  245 (317)
T 2buj_A          213 ELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP  245 (317)
T ss_dssp             GGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred             hHhccCCCcCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9987554   68899999999999999999987

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.96  E-value=3.5e-29  Score=211.50  Aligned_cols=144  Identities=24%  Similarity=0.423  Sum_probs=126.0

Q ss_pred             eEEEcCCCCc----------ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcc
Q 040292           74 ISEFGDNLNT----------EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~----------~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~  142 (227)
                      ||.+......          +.+.  +|+.++.++ +||||+++++++...+..++||||+++++|.+++....     .
T Consensus       124 vK~~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-----~  196 (365)
T 2y7j_A          124 VKIMEVTAERLSPEQLEEVREATR--RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV-----A  196 (365)
T ss_dssp             EEEEETTSSCCCHHHHHHHHHHHH--HHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHS-----S
T ss_pred             EEEEEccccccCHHHHHHHHHHHH--HHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-----C
Confidence            8888765421          2345  899999999 89999999999999999999999999999999997543     6


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT  202 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~  202 (227)
                      +++..+..++.|++.||.|||   +.+++|+||||+||+++.++.+                    .||+.|+|||++.+
T Consensus       197 l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~  273 (365)
T 2y7j_A          197 LSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKC  273 (365)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccc
Confidence            889999999999999999999   8999999999999999877543                    57889999998853


Q ss_pred             ------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 ------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                            ..++.++|||||||++|+|++|+.|
T Consensus       274 ~~~~~~~~~~~~~Di~slG~il~ell~g~~p  304 (365)
T 2y7j_A          274 SMDETHPGYGKEVDLWACGVILFTLLAGSPP  304 (365)
T ss_dssp             TTCTTSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccCcCCCchhhHHhHHHHHHHHHHCCCC
Confidence                  3578899999999999999999987

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.96  E-value=3.6e-29  Score=207.92  Aligned_cols=149  Identities=23%  Similarity=0.384  Sum_probs=127.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC--CCcccCHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS--QLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~  148 (227)
                      ||.+......   .++.  +|+.++++++||||+++++++...+..++||||+++++|.+++......  ....+++..+
T Consensus        65 vK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  142 (327)
T 2yfx_A           65 VKTLPEVCSEQDELDFL--MEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL  142 (327)
T ss_dssp             EEECCSSCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHH
T ss_pred             EEEeccccchhhHHHHH--HHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHH
Confidence            8888654333   3455  9999999999999999999999999999999999999999999754321  1125889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---e-----------------------ecccCccccccccC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---L-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.   +                       .|++.|+|||.+.+
T Consensus       143 ~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  219 (327)
T 2yfx_A          143 LHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFME  219 (327)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcC
Confidence            999999999999999   899999999999999984331   1                       35678999999988


Q ss_pred             CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ..++.++||||||+++|+|+| |..|
T Consensus       220 ~~~~~~~Di~slG~il~ellt~g~~p  245 (327)
T 2yfx_A          220 GIFTSKTDTWSFGVLLWEIFSLGYMP  245 (327)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            889999999999999999998 7765

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=209.14  Aligned_cols=145  Identities=23%  Similarity=0.425  Sum_probs=124.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCC--cceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETE--VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++...+  ..++||||+++++|.+++.....    .+++..+.
T Consensus        75 vK~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~  148 (326)
T 2w1i_A           75 VKKLQHSTEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE----RIDHIKLL  148 (326)
T ss_dssp             EEEESSCCSHHHHHHH--HHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTT----SSCHHHHH
T ss_pred             EEEeccCCHHHHHHHH--HHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhccc----CCCHHHHH
Confidence            8888765443  4566  9999999999999999999987654  68899999999999999976432    68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||.|||   +.+++||||||+||+++.++.+                        .++..|+|||.+.+..+
T Consensus       149 ~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  225 (326)
T 2w1i_A          149 QYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF  225 (326)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCC
Confidence            99999999999999   8999999999999999876533                        24456999999988888


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||||+++|+|+||..|
T Consensus       226 ~~~~Di~slG~il~el~tg~~~  247 (326)
T 2w1i_A          226 SVASDVWSFGVVLYELFTYIEK  247 (326)
T ss_dssp             EHHHHHHHHHHHHHHHHHTTCG
T ss_pred             CchhhHHHHHHHHHHHHhcCCC
Confidence            9999999999999999999764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=9.2e-29  Score=205.05  Aligned_cols=143  Identities=23%  Similarity=0.341  Sum_probs=121.4

Q ss_pred             eEEEcCCCC----------cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLN----------TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~----------~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+.....          ...+.  +|+.++++++||||+++++++..+. .++||||+++++|.+++....     .+
T Consensus        40 vK~~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~-----~~  111 (322)
T 2ycf_A           40 IKIISKRKFAIGSAREADPALNVE--TEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNK-----RL  111 (322)
T ss_dssp             EEEECC---------------CHH--HHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTC-----CC
T ss_pred             EEEeehhhhhhcccccchhhhhHH--HHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccC-----CC
Confidence            888764321          13456  9999999999999999999987654 899999999999999987643     68


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---e--------------------ecccCccccccc
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---L--------------------IGTFGFIAPECI  200 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---~--------------------~g~~~y~aPE~~  200 (227)
                      ++..+..++.|++.||.|||   +++++||||||+||+++.++.   +                    .||+.|+|||++
T Consensus       112 ~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~  188 (322)
T 2ycf_A          112 KEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVL  188 (322)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhh
Confidence            89999999999999999999   899999999999999986542   1                    478899999997


Q ss_pred             c---CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 T---TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~---~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .   ...++.++|||||||++|+|++|..|
T Consensus       189 ~~~~~~~~~~~~Di~slG~il~~l~~g~~p  218 (322)
T 2ycf_A          189 VSVGTAGYNRAVDCWSLGVILFICLSGYPP  218 (322)
T ss_dssp             HHTTTTTCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            4   45688999999999999999999876

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=3.3e-29  Score=214.24  Aligned_cols=148  Identities=20%  Similarity=0.311  Sum_probs=121.1

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCC----CCCCcccCHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPN----GSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~----~~~~~~l~~~~  147 (227)
                      ||.+........+.  +|+.+|++++||||+++++++..  ....++||||+. |+|.+++....    ......+++..
T Consensus        53 iK~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~  129 (405)
T 3rgf_A           53 LKQIEGTGISMSAC--REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGM  129 (405)
T ss_dssp             EEECSSSSCCHHHH--HHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHH
T ss_pred             EEEECCCCCCHHHH--HHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHH
Confidence            88887665556677  99999999999999999999965  567899999997 58887775211    01112588999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceee----cCCCc------------------------eecccCcccccc
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHV----NDNDK------------------------LIGTFGFIAPEC  199 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~----~~~~~------------------------~~g~~~y~aPE~  199 (227)
                      +..++.|++.||.|||   +.+|+||||||+||++    +.++.                        .+||+.|+|||+
T Consensus       130 ~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  206 (405)
T 3rgf_A          130 VKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL  206 (405)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchh
Confidence            9999999999999999   8999999999999999    33322                        157889999999


Q ss_pred             ccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.+. .++.++|||||||++|+|++|++|
T Consensus       207 ~~~~~~~~~~~DiwSlG~il~ell~g~~p  235 (405)
T 3rgf_A          207 LLGARHYTKAIDIWAIGCIFAELLTSEPI  235 (405)
T ss_dssp             HTTCCSCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             hcCCCcccchhhhHHHHHHHHHHHhCCCC
Confidence            9875 489999999999999999999976

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=6.1e-29  Score=210.35  Aligned_cols=141  Identities=22%  Similarity=0.329  Sum_probs=121.2

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++...+      ..++||||++ ++|.+.+..       .+
T Consensus        55 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~~  124 (371)
T 2xrw_A           55 IKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQM-------EL  124 (371)
T ss_dssp             EEEEECTTSSHHHHHHHH--HHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS-EEHHHHHHS-------CC
T ss_pred             EEEeccccCChHHHHHHH--HHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC-CCHHHHHhh-------cc
Confidence            8888754333    3455  9999999999999999999997655      6799999997 578888863       57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~  203 (227)
                      ++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                    .||+.|+|||++.+.
T Consensus       125 ~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  201 (371)
T 2xrw_A          125 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM  201 (371)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTTCCHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCC
Confidence            88999999999999999999   8999999999999999876543                    578899999999988


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++.++||||+||++|+|++|+.|
T Consensus       202 ~~~~~~DiwslG~il~el~~g~~p  225 (371)
T 2xrw_A          202 GYKENVDIWSVGCIMGEMIKGGVL  225 (371)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCC
Confidence            899999999999999999999876

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.96  E-value=7.5e-29  Score=213.88  Aligned_cols=142  Identities=19%  Similarity=0.308  Sum_probs=121.8

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC-----CcceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET-----EVPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||++......    +.+.  +|+.+|++++||||+++++++...     +..|+||||+. ++|.+++....     .++
T Consensus        56 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-----~l~  127 (432)
T 3n9x_A           56 IKKVNRMFEDLIDCKRIL--REITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPI-----FLT  127 (432)
T ss_dssp             EEEECSTTTSHHHHHHHH--HHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSC-----CCC
T ss_pred             EEEeCchhcChHHHHHHH--HHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccC-----CCC
Confidence            8888754333    3555  999999999999999999999876     56899999996 69999997653     689


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------------------
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------------------  188 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------------------  188 (227)
                      +..+..++.|++.||.|||   +.+|+||||||+||+++.++.+                                    
T Consensus       128 ~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (432)
T 3n9x_A          128 EEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL  204 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccch
Confidence            9999999999999999999   8999999999999999876422                                    


Q ss_pred             -------ecccCccccccc-cCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          189 -------IGTFGFIAPECI-TTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       189 -------~g~~~y~aPE~~-~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                             +||++|+|||++ ....++.++||||+||++|||++|..
T Consensus       205 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~  250 (432)
T 3n9x_A          205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ  250 (432)
T ss_dssp             ------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred             hccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence                   458889999986 45569999999999999999998644

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=4.6e-29  Score=211.04  Aligned_cols=142  Identities=23%  Similarity=0.404  Sum_probs=119.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||++......    +.+.  +|+.+++.++||||+++++++...      ...++|+|++ +++|.+++...      .+
T Consensus        59 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~------~l  129 (367)
T 2fst_X           59 VKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ------KL  129 (367)
T ss_dssp             EEECSSTTSSHHHHHHHH--HHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----C------CC
T ss_pred             EEEeCccccCHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcC------CC
Confidence            8888654332    3455  999999999999999999999754      4579999999 68999888652      68


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                  +||+.|+|||++.+ ..
T Consensus       130 ~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~  206 (367)
T 2fst_X          130 TDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMH  206 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---------------CCCTTCCHHHHTTCCS
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcC
Confidence            89999999999999999999   8999999999999999877543                  58889999999977 56


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||+||++|||++|+.|
T Consensus       207 ~~~~~DiwslG~il~ell~g~~p  229 (367)
T 2fst_X          207 YNQTVDIWSVGCIMAELLTGRTL  229 (367)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999976

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.1e-29  Score=207.21  Aligned_cols=146  Identities=23%  Similarity=0.389  Sum_probs=119.1

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhcC--CCcccceeEEEEeeC----CcceeEeecccCCChhhhhcCCCCC
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQM--SHKNILKFVGCCLET----EVPILVFEFVACGTLADRIHDPNGS  138 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l--~H~niv~l~g~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~  138 (227)
                      +...+..  ||.+..... ..+.  +|..++..+  +||||+++++++...    ...++||||+++|+|.+++...   
T Consensus        56 ~~~~~~~vavK~~~~~~~-~~~~--~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---  129 (337)
T 3mdy_A           56 GKWRGEKVAVKVFFTTEE-ASWF--RETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST---  129 (337)
T ss_dssp             EEETTEEEEEEEEEGGGH-HHHH--HHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC---
T ss_pred             EEECCceEEEEEEecccc-chhh--hHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc---
Confidence            4444444  888754322 3334  555555554  999999999999887    6789999999999999999653   


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCC--------CeEEecCCCCceeecCCCce----------------------
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSR--------PIVFRDIKPFTTHVNDNDKL----------------------  188 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~--------~i~H~dlkp~nil~~~~~~~----------------------  188 (227)
                         .+++..+..++.|++.||.|||   +.        +++||||||+||+++.++.+                      
T Consensus       130 ---~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  203 (337)
T 3mdy_A          130 ---TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP  203 (337)
T ss_dssp             ---CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------C
T ss_pred             ---CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCC
Confidence               5889999999999999999999   77        99999999999999876432                      


Q ss_pred             ---ecccCccccccccCCCCCc------hhhHHHHHHHHHHHHhC
Q 040292          189 ---IGTFGFIAPECITTGNCNE------KSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 ---~g~~~y~aPE~~~~~~~~~------~~DvwS~G~il~el~tg  224 (227)
                         .||+.|+|||++.+.....      ++|||||||++|||+||
T Consensus       204 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             CSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence               4788999999998766554      49999999999999999

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.96  E-value=8.5e-29  Score=202.60  Aligned_cols=135  Identities=14%  Similarity=0.171  Sum_probs=117.5

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+..+.+++||||+++++++..++..|+||||+++++|.+++...      . ...++
T Consensus        61 vK~~~~~~~~~~~~~~~~~--~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~------~-~~~~~  131 (286)
T 3uqc_A           61 LTFVDPQGVLPDDVLQETL--SRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS------P-SPVGA  131 (286)
T ss_dssp             EEESCTTCCSCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTC------C-CHHHH
T ss_pred             EEEECcccccCHHHHHHHH--HHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcC------C-ChHHH
Confidence            8888765443     4566  9999999999999999999999999999999999999999999542      2 34467


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.+ +++++|++|       ++.++|||||||++|||+||+.|
T Consensus       132 ~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~~-------~~~~~Di~slG~il~elltg~~P  201 (286)
T 3uqc_A          132 IRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMPD-------ANPQDDIRGIGASLYALLVNRWP  201 (286)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCTT-------CCHHHHHHHHHHHHHHHHHSEEC
T ss_pred             HHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccCC-------CCchhHHHHHHHHHHHHHHCCCC
Confidence            889999999999999   8999999999999999988765 567777764       68999999999999999999876

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=7.2e-29  Score=208.71  Aligned_cols=133  Identities=24%  Similarity=0.299  Sum_probs=115.4

Q ss_pred             cccchhHHHHHhcCCCcccceeEEEEeeCC-----cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHH
Q 040292           85 EYYCFNCIAFASQMSHKNILKFVGCCLETE-----VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV  159 (227)
Q Consensus        85 ~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl  159 (227)
                      .+.  +|+.++++++||||+++++++...+     ..++||||+. |+|.+++.....    .+++..+..++.|++.||
T Consensus        75 ~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l  147 (362)
T 3pg1_A           75 RVL--REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI----VISPQHIQYFMYHILLGL  147 (362)
T ss_dssp             HHH--HHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS----CCCHHHHHHHHHHHHHHH
T ss_pred             HHH--HHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc----CCCHHHHHHHHHHHHHHH
Confidence            455  9999999999999999999986533     4789999997 688888875442    688999999999999999


Q ss_pred             HHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccC-CCCCchhhHHHHHHHH
Q 040292          160 AYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITT-GNCNEKSDVYSFGALL  218 (227)
Q Consensus       160 ~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~-~~~~~~~DvwS~G~il  218 (227)
                      .|||   +.+++||||||+||+++.++.+                    .||+.|+|||.+.+ ..++.++||||+||++
T Consensus       148 ~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  224 (362)
T 3pg1_A          148 HVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM  224 (362)
T ss_dssp             HHHH---HTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred             HHHH---HCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHH
Confidence            9999   8999999999999999876543                    57788999999877 5689999999999999


Q ss_pred             HHHHhCCCC
Q 040292          219 LELLTGKKG  227 (227)
Q Consensus       219 ~el~tg~~p  227 (227)
                      |+|++|+.|
T Consensus       225 ~~l~~g~~p  233 (362)
T 3pg1_A          225 AEMFNRKAL  233 (362)
T ss_dssp             HHHHHSSCS
T ss_pred             HHHHhCCCC
Confidence            999999976

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=6.2e-29  Score=206.07  Aligned_cols=146  Identities=27%  Similarity=0.429  Sum_probs=123.5

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC-CCcccceeEEEEee------CCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM-SHKNILKFVGCCLE------TEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+...... +.+.  +|+.+++++ +||||+++++++..      .+..++||||+++++|.+++.....   ..+++
T Consensus        54 iK~~~~~~~~~~~~~--~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~  128 (326)
T 2x7f_A           54 IKVMDVTGDEEEEIK--QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKE  128 (326)
T ss_dssp             EEEEECCSSTTHHHH--HHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG---GCCCH
T ss_pred             EEEEecCcccHHHHH--HHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc---CCCCH
Confidence            8888655433 5677  999999999 89999999999987      4578999999999999999975321   26888


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc---
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT---  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~---  201 (227)
                      ..+..++.|++.||.|||   +.+++|+||||+||+++.++.+                     .|++.|+|||.+.   
T Consensus       129 ~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  205 (326)
T 2x7f_A          129 EWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE  205 (326)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCGGGCCHHHHC---
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCccccChhhhcccc
Confidence            999999999999999999   8999999999999999876533                     4788899999986   


Q ss_pred             --CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 --TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 --~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        ...++.++||||||+++|+|++|+.|
T Consensus       206 ~~~~~~~~~~Di~slG~il~~l~~g~~p  233 (326)
T 2x7f_A          206 NPDATYDFKSDLWSLGITAIEMAEGAPP  233 (326)
T ss_dssp             -----CCTTHHHHHHHHHHHHHHHSSCT
T ss_pred             ccCcCCCccchHHHHHHHHHHHHhCCCC
Confidence              45688999999999999999999976

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.95  E-value=1.8e-28  Score=203.58  Aligned_cols=140  Identities=21%  Similarity=0.321  Sum_probs=122.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCC-CcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMS-HKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.. ..+.+.  +|+.++++++ ||||+++++++..  ....++||||+++++|.+++.        .+++..+..
T Consensus        66 vK~~~~~-~~~~~~--~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--------~~~~~~~~~  134 (330)
T 3nsz_A           66 VKILKPV-KKKKIK--REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--------TLTDYDIRF  134 (330)
T ss_dssp             EEEECSC-CHHHHH--HHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG--------GCCHHHHHH
T ss_pred             EEEeccc-chHHHH--HHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH--------hCCHHHHHH
Confidence            8887643 335667  9999999996 9999999999987  567899999999999999885        578889999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-ce--------------------ecccCccccccccC-CCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-KL--------------------IGTFGFIAPECITT-GNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-~~--------------------~g~~~y~aPE~~~~-~~~~~~  208 (227)
                      ++.|++.||.|||   +.+++||||||+||+++.++ .+                    .|++.|+|||.+.+ ..++.+
T Consensus       135 ~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  211 (330)
T 3nsz_A          135 YMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS  211 (330)
T ss_dssp             HHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred             HHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCch
Confidence            9999999999999   89999999999999998655 22                    47788999999977 568999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +||||+||++|+|++|+.|
T Consensus       212 ~DiwslG~il~~ll~g~~p  230 (330)
T 3nsz_A          212 LDMWSLGCMLASMIFRKEP  230 (330)
T ss_dssp             HHHHHHHHHHHHHHHTCSS
T ss_pred             hhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999976

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.95  E-value=1.7e-28  Score=200.50  Aligned_cols=144  Identities=19%  Similarity=0.220  Sum_probs=124.4

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEE-eeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCC-LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+......+.+.  +|+.++++++|++++..++.+ ..++..++||||+ +++|.+++.....    ++++..+..++
T Consensus        39 vK~~~~~~~~~~~~--~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~i~  111 (296)
T 3uzp_A           39 IKLECVKTKHPQLH--IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR----KFSLKTVLLLA  111 (296)
T ss_dssp             EEEEESCSSCCHHH--HHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT----CCCHHHHHHHH
T ss_pred             EEEecCCcchhHHH--HHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhcc----CCCHHHHHHHH
Confidence            88888776667788  999999999998877776666 5566789999999 8999999974332    68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeec---CCCc----------------------------eecccCcccccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVN---DNDK----------------------------LIGTFGFIAPECIT  201 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~---~~~~----------------------------~~g~~~y~aPE~~~  201 (227)
                      .|++.||.|||   +++++||||||+||+++   .++.                            ..||+.|+|||.+.
T Consensus       112 ~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  188 (296)
T 3uzp_A          112 DQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL  188 (296)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhc
Confidence            99999999999   89999999999999994   3221                            14788899999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++||||||+++|+|++|+.|
T Consensus       189 ~~~~~~~~Di~slG~il~~l~~g~~p  214 (296)
T 3uzp_A          189 GIEQSRRDDLESLGYVLMYFNLGSLP  214 (296)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCC
Confidence            98999999999999999999999987

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=8.2e-30  Score=216.04  Aligned_cols=147  Identities=11%  Similarity=0.141  Sum_probs=118.1

Q ss_pred             eEEEcCCCCc-----ccccchhHH---HHHhcCCCcccceeE-------EEEeeCC-----------------cceeEee
Q 040292           74 ISEFGDNLNT-----EEYYCFNCI---AFASQMSHKNILKFV-------GCCLETE-----------------VPILVFE  121 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei---~~l~~l~H~niv~l~-------g~~~~~~-----------------~~~lV~E  121 (227)
                      ||.+......     +.+.  +|+   ..|++++||||++++       +++...+                 ..++|||
T Consensus       103 vK~~~~~~~~~~~~~~~~~--~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E  180 (377)
T 3byv_A          103 VHVPYFTERPPSNAIKQMK--EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYP  180 (377)
T ss_dssp             EEEEEECC-CCTTHHHHHH--HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEE
T ss_pred             EEEEeeccccchHHHHHHH--HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEe
Confidence            8888643221     4566  999   566666899999998       6665543                 2789999


Q ss_pred             cccCCChhhhhcCCCC--CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------
Q 040292          122 FVACGTLADRIHDPNG--SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------  188 (227)
Q Consensus       122 ~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------  188 (227)
                      |+ +|+|.+++.....  ....++++..+..++.|++.||+|||   +.+|+||||||+||+++.++.+           
T Consensus       181 ~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~  256 (377)
T 3byv_A          181 RM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD  256 (377)
T ss_dssp             CC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred             cc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEechhheec
Confidence            99 6899999975321  00124556888889999999999999   8999999999999999987643           


Q ss_pred             -------ecccCccccccccCC-----------CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -------IGTFGFIAPECITTG-----------NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -------~g~~~y~aPE~~~~~-----------~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                             +| +.|+|||++.+.           .++.++|||||||++|||++|+.|
T Consensus       257 ~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~P  312 (377)
T 3byv_A          257 GARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP  312 (377)
T ss_dssp             TCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCC
Confidence                   46 899999999877           799999999999999999999987

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.95  E-value=1.4e-28  Score=200.93  Aligned_cols=144  Identities=19%  Similarity=0.221  Sum_probs=122.5

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEE-eeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCC-LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+......+.+.  +|+.++++++|+|++..++.+ ..++..++||||+ +++|.+++.....    ++++..+..++
T Consensus        39 vK~~~~~~~~~~~~--~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~----~~~~~~~~~i~  111 (296)
T 4hgt_A           39 IKLECVKTKHPQLH--IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSR----KFSLKTVLLLA  111 (296)
T ss_dssp             EEEEEC---CCCHH--HHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTS----CCCHHHHHHHH
T ss_pred             EEeecccccchHHH--HHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcC----CCCHHHHHHHH
Confidence            88877666667777  999999999998888777666 5566789999999 8999999974332    68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceee---cCCCc----------------------------eecccCcccccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHV---NDNDK----------------------------LIGTFGFIAPECIT  201 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~---~~~~~----------------------------~~g~~~y~aPE~~~  201 (227)
                      .|++.||.|||   +.+++||||||+||++   +.++.                            ..||+.|+|||.+.
T Consensus       112 ~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  188 (296)
T 4hgt_A          112 DQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHL  188 (296)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHT
T ss_pred             HHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhc
Confidence            99999999999   8999999999999999   44321                            25788999999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++|||||||++|+|++|+.|
T Consensus       189 ~~~~~~~~Di~slG~il~~l~~g~~p  214 (296)
T 4hgt_A          189 GIEQSRRDDLESLGYVLMYFNLGSLP  214 (296)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCCCchhHHHHHHHHHHHHhcCCCC
Confidence            98999999999999999999999987

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=4.1e-29  Score=209.78  Aligned_cols=142  Identities=18%  Similarity=0.249  Sum_probs=124.1

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccce---------------eEEEEee-CCcceeEeecccCCChhhhhcCCCC
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILK---------------FVGCCLE-TEVPILVFEFVACGTLADRIHDPNG  137 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~---------------l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~  137 (227)
                      ||.+...   +.+.  +|+.++++++||||++               +++++.. ++..++||||+ +++|.+++.....
T Consensus        80 vK~~~~~---~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~  153 (352)
T 2jii_A           80 LKLDAKD---GRLF--NEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPK  153 (352)
T ss_dssp             EEEEETT---STHH--HHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGG
T ss_pred             EEEeccc---chHH--HHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCc
Confidence            8887644   4566  9999999999999998               6777776 67789999999 9999999975411


Q ss_pred             CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC--ce---------------------------
Q 040292          138 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KL---------------------------  188 (227)
Q Consensus       138 ~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~--~~---------------------------  188 (227)
                         ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++  .+                           
T Consensus       154 ---~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~  227 (352)
T 2jii_A          154 ---HVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSP  227 (352)
T ss_dssp             ---GCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCT
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcccccccccccc
Confidence               26899999999999999999999   89999999999999998775  21                           


Q ss_pred             -ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .||+.|+|||.+.+..++.++||||||+++|||++|+.|
T Consensus       228 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          228 HEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             TCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             ccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence             477899999999988899999999999999999999976

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.95  E-value=6.9e-29  Score=201.07  Aligned_cols=144  Identities=23%  Similarity=0.303  Sum_probs=121.5

Q ss_pred             eEEEcCCCC-----cccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLN-----TEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+.....     .+.+.  +|+.++++++||||+++++++...+..++||||+++++|.+++....     .+++..+
T Consensus        41 iK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~  113 (276)
T 2h6d_A           41 VKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG-----RVEEMEA  113 (276)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHC-----SCCHHHH
T ss_pred             EEEeccccccchhHHHHHH--HHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccC-----CCCHHHH
Confidence            888764321     13566  99999999999999999999999999999999999999999997543     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCCCC-Cc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTGNC-NE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~~~-~~  207 (227)
                      ..++.|++.||.|||   +.+++|+||||+||+++.++.+                    .|++.|+|||.+.+..+ +.
T Consensus       114 ~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  190 (276)
T 2h6d_A          114 RRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGP  190 (276)
T ss_dssp             HHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHH
T ss_pred             HHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCc
Confidence            999999999999999   8999999999999999876543                    47788999999987765 68


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||||+++|+|++|+.|
T Consensus       191 ~~Di~slG~~l~~l~~g~~p  210 (276)
T 2h6d_A          191 EVDIWSCGVILYALLCGTLP  210 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             cchHHHHHHHHHHHHhCCCC
Confidence            99999999999999999876

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.95  E-value=2.7e-28  Score=210.47  Aligned_cols=148  Identities=20%  Similarity=0.333  Sum_probs=121.2

Q ss_pred             ecCCC--eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           69 LQDHP--ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        69 ~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      .++..  ||++.... .+.+.  +|+.+|+++ +||||+++++++.+....++||||+. |+|.+++.....    ...+
T Consensus        46 ~~~~~vAvK~~~~~~-~~~~~--~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~----~~~~  117 (432)
T 3p23_A           46 FDNRDVAVKRILPEC-FSFAD--REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDF----AHLG  117 (432)
T ss_dssp             SSSSEEEEEEECTTT-EEECH--HHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSC----CCCS
T ss_pred             eCCeEEEEEEECHHH-HHHHH--HHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCC----Cccc
Confidence            34444  88886532 24456  999999999 89999999999999999999999996 699999976542    3444


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC---c--------------------------eecccCccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND---K--------------------------LIGTFGFIA  196 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~---~--------------------------~~g~~~y~a  196 (227)
                      ..+..++.|++.||.|||   +.+|+||||||+||+++.++   .                          .+||+.|+|
T Consensus       118 ~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~A  194 (432)
T 3p23_A          118 LEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA  194 (432)
T ss_dssp             SCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCC
T ss_pred             hhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccC
Confidence            566789999999999999   89999999999999995321   1                          148999999


Q ss_pred             cccccC---CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          197 PECITT---GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       197 PE~~~~---~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ||++..   ..++.++||||+||++|||++ |..|
T Consensus       195 PE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~p  229 (432)
T 3p23_A          195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP  229 (432)
T ss_dssp             GGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBT
T ss_pred             hhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCC
Confidence            999973   457889999999999999999 7665

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=4.3e-28  Score=205.87  Aligned_cols=145  Identities=25%  Similarity=0.306  Sum_probs=118.2

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC--------------------------------------c
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE--------------------------------------V  115 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~--------------------------------------~  115 (227)
                      ||++....  ....  +|+.+++.++||||+++++++....                                      .
T Consensus        37 iK~~~~~~--~~~~--~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (383)
T 3eb0_A           37 LKKVLQDP--RYKN--RELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKY  112 (383)
T ss_dssp             EEEEECCT--TSCC--HHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCE
T ss_pred             EEEEecCc--chHH--HHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceE
Confidence            88876442  3344  8999999999999999999985432                                      3


Q ss_pred             ceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-CCce------
Q 040292          116 PILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKL------  188 (227)
Q Consensus       116 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-~~~~------  188 (227)
                      .++||||++ |+|.+.+....... ..+++..+..++.|++.||.|||   +.+++||||||+||+++. ++.+      
T Consensus       113 ~~lv~e~~~-~~L~~~l~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg  187 (383)
T 3eb0_A          113 LNVIMEYVP-DTLHKVLKSFIRSG-RSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFG  187 (383)
T ss_dssp             EEEEECCCS-EEHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCT
T ss_pred             EEEEEecCC-ccHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECC
Confidence            789999998 58777665311000 26889999999999999999999   999999999999999973 4322      


Q ss_pred             --------------ecccCccccccccCCC-CCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 --------------IGTFGFIAPECITTGN-CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 --------------~g~~~y~aPE~~~~~~-~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                    .||+.|+|||.+.+.. ++.++||||+||++|||++|++|
T Consensus       188 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p  241 (383)
T 3eb0_A          188 SAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPL  241 (383)
T ss_dssp             TCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCC
Confidence                          5788899999987654 89999999999999999999976

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.95  E-value=4.2e-29  Score=203.71  Aligned_cols=144  Identities=23%  Similarity=0.453  Sum_probs=120.2

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++.....     +.+.  +|+.++++++||||+++++++..+. .++|+||+++++|.+++....    ..+++..+
T Consensus        51 vK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~----~~~~~~~~  123 (291)
T 1u46_A           51 VKCLKPDVLSQPEAMDDFI--REVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQ----GHFLLGTL  123 (291)
T ss_dssp             EEC--------CHHHHHHH--HHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHG----GGSCHHHH
T ss_pred             EEEEccCccCCHHHHHHHH--HHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhcc----CCcCHHHH
Confidence            7776644221     4566  9999999999999999999998654 889999999999999997542    26889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..++.|++.||.|||   +.+++|+||||+||+++.++.+                        .+++.|+|||.+.+..
T Consensus       124 ~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  200 (291)
T 1u46_A          124 SRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT  200 (291)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCC
Confidence            999999999999999   8999999999999999866532                        3455799999998888


Q ss_pred             CCchhhHHHHHHHHHHHHh-CCCC
Q 040292          205 CNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++.++||||||+++|+|++ |+.|
T Consensus       201 ~~~~~Di~slG~il~~l~~~g~~p  224 (291)
T 1u46_A          201 FSHASDTWMFGVTLWEMFTYGQEP  224 (291)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCC
Confidence            8999999999999999999 8876

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.95  E-value=1e-28  Score=223.13  Aligned_cols=144  Identities=25%  Similarity=0.365  Sum_probs=123.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.|.  +|+.++++++||||+++++++. ++..++||||+++|+|.+++.....    ++++..+..
T Consensus       423 iK~~~~~~~~~~~~~~~--~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~----~l~~~~~~~  495 (656)
T 2j0j_A          423 IKTCKNCTSDSVREKFL--QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKF----SLDLASLIL  495 (656)
T ss_dssp             EEECSSTTCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTT----TCCHHHHHH
T ss_pred             EEEecccCCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccC----CCCHHHHHH
Confidence            6666544332   4566  9999999999999999999985 5678999999999999999975432    688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.||.|||   +++++||||||+||+++.++.+                      .+++.|+|||++....++.+
T Consensus       496 i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  572 (656)
T 2j0j_A          496 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA  572 (656)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCch
Confidence            9999999999999   8999999999999999876533                      34568999999988889999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +||||||+++|||++ |..|
T Consensus       573 ~DiwSlG~il~ellt~g~~P  592 (656)
T 2j0j_A          573 SDVWMFGVCMWEILMHGVKP  592 (656)
T ss_dssp             HHHHHHHHHHHHHHTTSCCT
T ss_pred             hhHHHHHHHHHHHHHcCCCC
Confidence            999999999999997 8766

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=1.2e-29  Score=211.12  Aligned_cols=151  Identities=22%  Similarity=0.358  Sum_probs=118.2

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEee-----CCcceeEeecccCCChhhhhcCCCCCC
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLE-----TEVPILVFEFVACGTLADRIHDPNGSQ  139 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~  139 (227)
                      +..++..  ||.+.... .+.+....|+..+..++||||+++++.+..     ....++||||+++|+|.+++...    
T Consensus        32 ~~~~~~~vavK~~~~~~-~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~----  106 (336)
T 3g2f_A           32 GSLDERPVAVKVFSFAN-RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH----  106 (336)
T ss_dssp             EEETTEEEEEEEEEGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC----
T ss_pred             EEECCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhc----
Confidence            4444444  88886432 233441144445566899999999986643     22468999999999999999654    


Q ss_pred             CcccCHHHHHHHHHHHHHHHHHhhhcCCC---------CeEEecCCCCceeecCCCce----------------------
Q 040292          140 LEPFLMKHRLKVAMEIANAVAYLHVGFSR---------PIVFRDIKPFTTHVNDNDKL----------------------  188 (227)
Q Consensus       140 ~~~l~~~~~~~i~~~i~~gl~~LH~~~~~---------~i~H~dlkp~nil~~~~~~~----------------------  188 (227)
                        ..++..+..++.|++.||.|||   +.         +++||||||+||+++.++.+                      
T Consensus       107 --~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~  181 (336)
T 3g2f_A          107 --TSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE  181 (336)
T ss_dssp             --CBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC-----
T ss_pred             --ccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCcccc
Confidence              4578889999999999999999   78         99999999999999876532                      


Q ss_pred             -------ecccCccccccccC-------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -------IGTFGFIAPECITT-------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -------~g~~~y~aPE~~~~-------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                             .||+.|+|||++.+       ..++.++|||||||++|||++|..|
T Consensus       182 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  234 (336)
T 3g2f_A          182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD  234 (336)
T ss_dssp             ----CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred             ccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCc
Confidence                   37889999999976       3456789999999999999999643

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.95  E-value=1.9e-28  Score=210.69  Aligned_cols=145  Identities=23%  Similarity=0.254  Sum_probs=117.0

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||++....  ..+.  +|+.+|++++||||++++++|....      ..++||||+++ ++.+.+..... ....+++..
T Consensus        84 iK~~~~~~--~~~~--~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~l~~~~  157 (420)
T 1j1b_A           84 IKKVLQDK--RFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR-AKQTLPVIY  157 (420)
T ss_dssp             EEEEECCT--TSCC--HHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHH-TTCCCCHHH
T ss_pred             EEEecccc--hhHH--HHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhh-ccCCCCHHH
Confidence            88876432  3344  8999999999999999999986522      25699999985 66655532100 002688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-ce--------------------ecccCccccccccCC-CC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-KL--------------------IGTFGFIAPECITTG-NC  205 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-~~--------------------~g~~~y~aPE~~~~~-~~  205 (227)
                      +..++.|++.||.|||   +.+|+||||||+||+++.++ .+                    +||+.|+|||++.+. .+
T Consensus       158 ~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  234 (420)
T 1j1b_A          158 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY  234 (420)
T ss_dssp             HHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCC
Confidence            9999999999999999   99999999999999998543 21                    578889999999765 68


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++|||||||++|||++|++|
T Consensus       235 ~~~~DiwSlG~il~ell~G~~p  256 (420)
T 1j1b_A          235 TSSIDVWSAGCVLAELLLGQPI  256 (420)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CchhhhHHHHHHHHHHHhCCCC
Confidence            9999999999999999999976

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.95  E-value=1.7e-28  Score=209.25  Aligned_cols=145  Identities=21%  Similarity=0.242  Sum_probs=115.5

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCCc------ceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETEV------PILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~------~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||++....  ....  +|+.+++.++||||+++++++...+.      .++||||++++ +.+.+..... ....+++..
T Consensus        69 ikk~~~~~--~~~~--~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~  142 (394)
T 4e7w_A           69 IKKVLQDK--RFKN--RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPET-VYRASRHYAK-LKQTMPMLL  142 (394)
T ss_dssp             EEEEECCT--TSCC--HHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEE-HHHHHHHHHH-TTSCCCHHH
T ss_pred             EEEEecCc--chHH--HHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCcc-HHHHHHHHHh-hcCCCCHHH
Confidence            66665432  2334  89999999999999999999976443      78999999864 4333321000 002688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeec-CCCce--------------------ecccCccccccccCC-CC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKL--------------------IGTFGFIAPECITTG-NC  205 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~-~~~~~--------------------~g~~~y~aPE~~~~~-~~  205 (227)
                      +..++.|++.||.|||   +.+|+||||||+||+++ .++.+                    .||+.|+|||.+.+. .+
T Consensus       143 ~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  219 (394)
T 4e7w_A          143 IKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNY  219 (394)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCC
Confidence            9999999999999999   89999999999999998 44432                    578889999998765 48


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||+||++|||++|++|
T Consensus       220 ~~~~DiwSlG~il~ell~g~~p  241 (394)
T 4e7w_A          220 TTNIDIWSTGCVMAELMQGQPL  241 (394)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcHHHHHHHHHHHHHHHhCCCC
Confidence            9999999999999999999986

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.95  E-value=1.3e-28  Score=212.27  Aligned_cols=145  Identities=21%  Similarity=0.267  Sum_probs=124.7

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcC------CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQM------SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l------~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.+...... +.+.  +|+.+++.+      +|+||+++++++...+..++||||+. ++|.+++.....   ..+++.
T Consensus       127 vK~~~~~~~~~~~~~--~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~  200 (429)
T 3kvw_A          127 LKMVRNEKRFHRQAA--EEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKF---QGFSLP  200 (429)
T ss_dssp             EEEECSCHHHHHHHH--HHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTT---CCCCHH
T ss_pred             EEEECCccchHHHHH--HHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccC---CCCCHH
Confidence            8888654322 3455  788877776      67799999999999999999999996 699998875432   258899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc--e------------------ecccCccccccccCCCCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK--L------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~--~------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      .+..++.|++.||.|||   +.+|+||||||+||+++.++.  +                  +||+.|+|||++.+..++
T Consensus       201 ~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~  277 (429)
T 3kvw_A          201 LVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYG  277 (429)
T ss_dssp             HHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCC
T ss_pred             HHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCCCC
Confidence            99999999999999999   889999999999999998764  2                  578899999999988999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|||||||++|||++|++|
T Consensus       278 ~~~DiwSlG~il~elltG~~p  298 (429)
T 3kvw_A          278 MPIDMWSLGCILAELLTGYPL  298 (429)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             chHHHHhHHHHHHHHHhCCCC
Confidence            999999999999999999876

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.95  E-value=2.7e-28  Score=206.33  Aligned_cols=141  Identities=25%  Similarity=0.411  Sum_probs=123.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcc------eeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVP------ILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~------~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++...+..      ++||||+. ++|.+++..       .+
T Consensus        72 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~~  141 (371)
T 4exu_A           72 IKKLSRPFQSEIFAKRAY--RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGM-------EF  141 (371)
T ss_dssp             EEEECSTTSSHHHHHHHH--HHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTS-------CC
T ss_pred             EEEecccccchhHHHHHH--HHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhc-------CC
Confidence            8888765433    3455  999999999999999999999877654      99999997 688888743       58


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                  .||+.|+|||++.+ ..
T Consensus       142 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~  218 (371)
T 4exu_A          142 SEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH  218 (371)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSC
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCC
Confidence            89999999999999999999   8999999999999999877643                  57889999999987 67


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|||||||++|+|++|+.|
T Consensus       219 ~~~~~DiwslG~il~el~~g~~p  241 (371)
T 4exu_A          219 YNQTVDIWSVGCIMAEMLTGKTL  241 (371)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CCcHHhHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999986

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.95  E-value=2.1e-28  Score=206.38  Aligned_cols=142  Identities=20%  Similarity=0.294  Sum_probs=122.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC-----CcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET-----EVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......   +.+.  +|+.++.+++||||+++++++...     ...++||||+. |+|.+++...      .+++
T Consensus        57 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~------~~~~  127 (364)
T 3qyz_A           57 IKKISPFEHQTYCQRTL--REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ------HLSN  127 (364)
T ss_dssp             EEEECCTTCHHHHHHHH--HHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHC------CCCH
T ss_pred             EEEeccccCcHHHHHHH--HHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhC------CCCH
Confidence            8888754433   4566  999999999999999999999765     35789999997 5999988653      5889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCcccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECIT  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~  201 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||+++.++.+                        +||+.|+|||++.
T Consensus       128 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  204 (364)
T 3qyz_A          128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML  204 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhc
Confidence            999999999999999999   8999999999999999876532                        5788899999875


Q ss_pred             CC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +. .++.++||||+||++|+|++|++|
T Consensus       205 ~~~~~~~~~DiwslG~il~ell~g~~p  231 (364)
T 3qyz_A          205 NSKGYTKSIDIWSVGCILAEMLSNRPI  231 (364)
T ss_dssp             TBCSCSTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCCCcchhHHHHHHHHHHHHHCCCC
Confidence            44 489999999999999999999976

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=2.2e-28  Score=199.58  Aligned_cols=143  Identities=26%  Similarity=0.427  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++...+..++|+||+++++|.+++....     .+++..+.
T Consensus        52 lK~~~~~~~~~~~~~~~~--~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~  124 (287)
T 2wei_A           52 VKVINKASAKNKDTSTIL--REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-----RFSEHDAA  124 (287)
T ss_dssp             EEEEEGGGBSSSCHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHS-----SCCHHHHH
T ss_pred             EEEecccccchHHHHHHH--HHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcC-----CCCHHHHH
Confidence            8887644322    4566  99999999999999999999999999999999999999999886543     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---e--------------------ecccCccccccccCCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---L--------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---~--------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      .++.|++.||.|||   +.+++|+||||+||+++.++.   +                    .|++.|+|||.+.+ .++
T Consensus       125 ~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~  200 (287)
T 2wei_A          125 RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYD  200 (287)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTT-CCC
T ss_pred             HHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcC-CCC
Confidence            99999999999999   899999999999999975431   1                    36778999998865 489


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||||+++|+|++|..|
T Consensus       201 ~~~Di~slG~~l~~l~~g~~p  221 (287)
T 2wei_A          201 EKCDVWSAGVILYILLSGTPP  221 (287)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             CchhhHhHHHHHHHHHhCCCC
Confidence            999999999999999999876

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.95  E-value=1.9e-28  Score=200.61  Aligned_cols=144  Identities=24%  Similarity=0.368  Sum_probs=125.2

Q ss_pred             eEEEcCCCCc-----------ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT-----------EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~-----------~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.+......           +.+.  +|+.+++++. ||||+++++++..++..++||||+++++|.+++....     
T Consensus        47 vK~~~~~~~~~~~~~~~~~~~~~~~--~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----  119 (298)
T 1phk_A           47 VKIIDVTGGGSFSAEEVQELREATL--KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-----  119 (298)
T ss_dssp             EEEEETTCSTTCCHHHHHHHHHHHH--HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----
T ss_pred             EEEEecccccccCHHHHHHHHHHHH--HHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccC-----
Confidence            8888654311           2445  8999999995 9999999999999999999999999999999997543     


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~  201 (227)
                      .+++..+..++.|++.||.|||   +.+++|+||+|+||+++.++.+                    .|++.|+|||.+.
T Consensus       120 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (298)
T 1phk_A          120 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE  196 (298)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccccCHHHhc
Confidence            6889999999999999999999   8999999999999999876543                    4788899999884


Q ss_pred             ------CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 ------TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ------~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                            ...++.++||||||+++|+|++|..|
T Consensus       197 ~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  228 (298)
T 1phk_A          197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP  228 (298)
T ss_dssp             HHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccccccCCcccccHhHHHHHHHHHHCCCC
Confidence                  44578999999999999999999876

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.95  E-value=9.8e-29  Score=209.69  Aligned_cols=145  Identities=20%  Similarity=0.260  Sum_probs=121.1

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC--------CcccceeEEEEe----eCCcceeEeecccCCChhhhhcCCCCCCC
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS--------HKNILKFVGCCL----ETEVPILVFEFVACGTLADRIHDPNGSQL  140 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~--------H~niv~l~g~~~----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~  140 (227)
                      ||.+...... +.+.  +|+.++++++        ||||+++++++.    .+...++||||+ +++|.+.+.....   
T Consensus        67 vK~~~~~~~~~~~~~--~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~---  140 (397)
T 1wak_A           67 MKVVKSAEHYTETAL--DEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNY---  140 (397)
T ss_dssp             EEEECSCHHHHHHHH--HHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTT---
T ss_pred             EEEEecCCcchHHHH--HHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhccc---
Confidence            8888654322 4566  9999999985        888999999987    455789999999 5677666654321   


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCC---------------------------------
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDND---------------------------------  186 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~---------------------------------  186 (227)
                      ..+++..+..++.|++.||.|||   ++ +|+||||||+||+++.++                                 
T Consensus       141 ~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (397)
T 1wak_A          141 QGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATA  217 (397)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------C
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccc
Confidence            26889999999999999999999   87 999999999999998653                                 


Q ss_pred             ----------------c------------------eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          187 ----------------K------------------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       187 ----------------~------------------~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                      .                  .+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       218 ~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  292 (397)
T 1wak_A          218 GNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYL  292 (397)
T ss_dssp             CTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCC
Confidence                            1                  1478899999999988899999999999999999999876

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.95  E-value=1.9e-28  Score=203.50  Aligned_cols=145  Identities=23%  Similarity=0.314  Sum_probs=124.5

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcc------cceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKN------ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++..... +.+.  +|+.+++.++|+|      ++++++++...+..++||||+ +++|.+++.....   .++++.
T Consensus        45 vK~~~~~~~~~~~~~--~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~---~~~~~~  118 (339)
T 1z57_A           45 VKIVKNVDRYCEAAR--SEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGF---LPFRLD  118 (339)
T ss_dssp             EEEECSSHHHHHHHH--HHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCCHH
T ss_pred             EEEEecCCchhHHHH--HHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCC---CCCcHH
Confidence            8888654322 4566  8999999887765      999999999999999999999 7899999875432   257889


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-------------------c------------------ee
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-------------------K------------------LI  189 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-------------------~------------------~~  189 (227)
                      .+..++.|++.||+|||   +++++||||||+||+++..+                   .                  ..
T Consensus       119 ~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  195 (339)
T 1z57_A          119 HIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLV  195 (339)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCCSSC
T ss_pred             HHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcccccccc
Confidence            99999999999999999   89999999999999997632                   1                  15


Q ss_pred             cccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       190 g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       196 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  233 (339)
T 1z57_A          196 STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV  233 (339)
T ss_dssp             SCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence            78899999999988899999999999999999999876

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.95  E-value=4.4e-28  Score=203.46  Aligned_cols=141  Identities=25%  Similarity=0.405  Sum_probs=122.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCc------ceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEV------PILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~------~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||.+......    +.+.  +|+.++++++||||+++++++...+.      .++||||+. ++|.+++..       .+
T Consensus        54 iK~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-------~~  123 (353)
T 3coi_A           54 IKKLSRPFQSEIFAKRAY--RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGL-------KF  123 (353)
T ss_dssp             EEEESSTTSSHHHHHHHH--HHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTS-------CC
T ss_pred             EEEecccccchHHHHHHH--HHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcC-------CC
Confidence            8888765433    3455  99999999999999999999987654      499999997 688887753       57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccC-CC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITT-GN  204 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~-~~  204 (227)
                      ++..+..++.|++.||.|||   +++++||||||+||+++.++.+                  .||+.|+|||.+.+ ..
T Consensus       124 ~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  200 (353)
T 3coi_A          124 SEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMH  200 (353)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSC
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCC
Confidence            88999999999999999999   8999999999999999877643                  57889999999876 56


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||+|+++|+|++|+.|
T Consensus       201 ~~~~~Di~slG~il~el~~g~~p  223 (353)
T 3coi_A          201 YNQTVDIWSVGCIMAEMLTGKTL  223 (353)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999876

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.95  E-value=1.6e-28  Score=211.93  Aligned_cols=147  Identities=22%  Similarity=0.323  Sum_probs=115.5

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCC--cccCHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQL--EPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~--~~l~~~~~~~  150 (227)
                      ||++.... .+.+.  +|+.+|.++ +||||+++++++..++..++||||+. |+|.+++........  ...++..+..
T Consensus        44 vK~~~~~~-~~~~~--~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~  119 (434)
T 2rio_A           44 VKRMLIDF-CDIAL--MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPIS  119 (434)
T ss_dssp             EEEEEGGG-HHHHH--HHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHH
T ss_pred             EEEEcHHH-HHHHH--HHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHH
Confidence            88886532 23455  999999886 89999999999999999999999996 699999986542111  0123345678


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-------------c-------------------------eeccc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-------------K-------------------------LIGTF  192 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-------------~-------------------------~~g~~  192 (227)
                      ++.|++.||+|||   +.+|+||||||+||+++.++             .                         ..||+
T Consensus       120 i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~  196 (434)
T 2rio_A          120 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTS  196 (434)
T ss_dssp             HHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CC
T ss_pred             HHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCC
Confidence            9999999999999   89999999999999996432             1                         15888


Q ss_pred             CccccccccC-------CCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          193 GFIAPECITT-------GNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       193 ~y~aPE~~~~-------~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .|+|||++.+       ..++.++|||||||++|||+| |+.|
T Consensus       197 ~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P  239 (434)
T 2rio_A          197 GWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP  239 (434)
T ss_dssp             TTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence            9999999965       568999999999999999999 7776

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=4.3e-28  Score=197.58  Aligned_cols=149  Identities=19%  Similarity=0.279  Sum_probs=117.5

Q ss_pred             eEEEcCCCCcc-cccch-hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTE-EYYCF-NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~-~~~~~-~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+....... ..... ++...++.++||||+++++++..++..++||||++ |+|.+++....... .++++..+..+
T Consensus        37 vK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~i  114 (290)
T 3fme_A           37 VKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKG-QTIPEDILGKI  114 (290)
T ss_dssp             EEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTT-CCCCHHHHHHH
T ss_pred             EEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcC-CCCCHHHHHHH
Confidence            88887654431 11111 44455888899999999999999999999999997 58877765311000 26899999999


Q ss_pred             HHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCCce--------------------ecccCccccccc----cCCCCC
Q 040292          152 AMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECI----TTGNCN  206 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~----~~~~~~  206 (227)
                      +.|++.||.|||   ++ +++||||||+||+++.++.+                    .||+.|+|||.+    ....++
T Consensus       115 ~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  191 (290)
T 3fme_A          115 AVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS  191 (290)
T ss_dssp             HHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CC
T ss_pred             HHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCC
Confidence            999999999999   77 99999999999999876543                    588899999996    455689


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+|+++|+|++|+.|
T Consensus       192 ~~~Di~slG~il~~l~~g~~p  212 (290)
T 3fme_A          192 VKSDIWSLGITMIELAILRFP  212 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCS
T ss_pred             cHHHHHHHHHHHHHHHHCCCC
Confidence            999999999999999999976

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=3.3e-28  Score=199.79  Aligned_cols=145  Identities=23%  Similarity=0.375  Sum_probs=118.6

Q ss_pred             eEEEcCCC------CcccccchhHHHHHhcCCCcccceeEEEEe--eCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNL------NTEEYYCFNCIAFASQMSHKNILKFVGCCL--ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~------~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~--~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+....      ..+.+.  +|+.++++++||||+++++++.  +.+..++||||++++ |.+++.....   ..+++
T Consensus        35 vK~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~---~~~~~  108 (305)
T 2wtk_C           35 VKILKKKKLRRIPNGEANVK--KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPE---KRFPV  108 (305)
T ss_dssp             EEEECHHHHHHSTTHHHHHH--HHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTT---CSCCH
T ss_pred             EEEeccccccccchhHHHHH--HHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcc---cccCH
Confidence            78776432      124566  9999999999999999999985  445789999999866 7776654321   26889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..+..++.|++.||.|||   +++++||||||+||+++.++.+                       .|++.|+|||.+.+
T Consensus       109 ~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  185 (305)
T 2wtk_C          109 CQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANG  185 (305)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccC
Confidence            999999999999999999   8999999999999999876532                       37888999999976


Q ss_pred             CC--CCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 GN--CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ~~--~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..  ++.++||||||+++|+|++|+.|
T Consensus       186 ~~~~~~~~~Di~slG~il~~l~~g~~p  212 (305)
T 2wtk_C          186 LDTFSGFKVDIWSAGVTLYNITTGLYP  212 (305)
T ss_dssp             CSCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCCcchhhHHHHHHHHHHHHhCCCC
Confidence            44  37899999999999999999876

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=5.3e-28  Score=199.42  Aligned_cols=142  Identities=23%  Similarity=0.351  Sum_probs=120.1

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEe--------------eCCcceeEeecccCCChhhhhcCCCC
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCL--------------ETEVPILVFEFVACGTLADRIHDPNG  137 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~--------------~~~~~~lV~E~~~~gsL~~~l~~~~~  137 (227)
                      ||.+......  +.+.  +|+.++++++||||+++++++.              ..+..++||||++ |+|.+++...  
T Consensus        41 iK~~~~~~~~~~~~~~--~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--  115 (320)
T 2i6l_A           41 IKKIVLTDPQSVKHAL--REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG--  115 (320)
T ss_dssp             EEEEECCSHHHHHHHH--HHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC--
T ss_pred             EEEEecCChHHHHHHH--HHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcC--
Confidence            8888755433  4566  9999999999999999999874              3356789999997 6999998642  


Q ss_pred             CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC-Cce------------------------eccc
Q 040292          138 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-DKL------------------------IGTF  192 (227)
Q Consensus       138 ~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~-~~~------------------------~g~~  192 (227)
                          ++++..+..++.|++.||.|||   +.+++||||||+||+++.+ +.+                        .++.
T Consensus       116 ----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  188 (320)
T 2i6l_A          116 ----PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK  188 (320)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCC
T ss_pred             ----CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccc
Confidence                6888999999999999999999   8999999999999999743 221                        2477


Q ss_pred             CccccccccC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          193 GFIAPECITT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       193 ~y~aPE~~~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .|+|||.+.. ..++.++||||||+++|||++|+.|
T Consensus       189 ~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p  224 (320)
T 2i6l_A          189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTL  224 (320)
T ss_dssp             TTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCC
Confidence            7999998865 5689999999999999999999876

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=4.7e-28  Score=200.64  Aligned_cols=145  Identities=19%  Similarity=0.335  Sum_probs=122.3

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC---CCcccceeEEEEe-----eCCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM---SHKNILKFVGCCL-----ETEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l---~H~niv~l~g~~~-----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.+......    ..+.  +|+.+++.+   +||||+++++++.     .....++||||+. |+|.+++.....   .
T Consensus        42 vK~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~  115 (326)
T 1blx_A           42 LKRVRVQTGEEGMPLSTI--REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPE---P  115 (326)
T ss_dssp             EEEEEEEBCTTSCBCTHH--HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCT---T
T ss_pred             EEEeccCcccccCCchhh--HHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhccc---C
Confidence            7877643322    3444  888877766   8999999999987     4557889999997 699999875432   1


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~  201 (227)
                      .+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                    .|++.|+|||.+.
T Consensus       116 ~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  192 (326)
T 1blx_A          116 GVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL  192 (326)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccccccccceeCHHHHh
Confidence            4889999999999999999999   8999999999999999876543                    4788899999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++||||||+++|+|++|+.|
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~p  218 (326)
T 1blx_A          193 QSSYATPVDLWSVGCIFAEMFRRKPL  218 (326)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCC
Confidence            88899999999999999999999976

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.95  E-value=6.4e-28  Score=202.56  Aligned_cols=149  Identities=21%  Similarity=0.244  Sum_probs=117.6

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCc-------ceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEV-------PILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-------~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+...... ..+.  +|+..++.++||||+++++++...+.       .++||||+++ +|.+.+....... ..+++
T Consensus        53 vK~~~~~~~~~~~~~--~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~-~~~~~  128 (360)
T 3e3p_A           53 IKKVIQDPRFRNREL--QIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQ-VAPPP  128 (360)
T ss_dssp             EEEEECCTTCCCHHH--HHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTT-CCCCH
T ss_pred             EEEEecCccccHHHH--HHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcc-cCCCH
Confidence            8888655433 4455  78888899999999999999976443       7899999985 5544433110000 26788


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-CCce--------------------ecccCccccccccCCC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-NDKL--------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-~~~~--------------------~g~~~y~aPE~~~~~~  204 (227)
                      ..+..++.|++.||.|||.. +.+++||||||+||+++. ++.+                    .||+.|+|||++.+..
T Consensus       129 ~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  207 (360)
T 3e3p_A          129 ILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQ  207 (360)
T ss_dssp             HHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCS
T ss_pred             HHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCC
Confidence            89999999999999999943 678999999999999986 4432                    4788899999986654


Q ss_pred             -CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 -CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 -~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       ++.++|||||||++|+|++|+.|
T Consensus       208 ~~~~~~Di~slG~il~ell~g~~p  231 (360)
T 3e3p_A          208 HYTTAVDIWSVGCIFAEMMLGEPI  231 (360)
T ss_dssp             SCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCC
Confidence             89999999999999999999976

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.95  E-value=4.6e-28  Score=202.91  Aligned_cols=142  Identities=23%  Similarity=0.273  Sum_probs=121.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC-----CcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET-----EVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......   ..+.  +|+.++++++||||+++++++...     ...++||||+. ++|.+++...      .+++
T Consensus        41 iK~~~~~~~~~~~~~~~--~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~------~~~~  111 (353)
T 2b9h_A           41 IKKIEPFDKPLFALRTL--REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQ------MLSD  111 (353)
T ss_dssp             EEEECCCSSHHHHHHHH--HHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHC------CCCH
T ss_pred             EEeecccccchHHHHHH--HHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhhc------CCCH
Confidence            8888654433   3455  999999999999999999998764     56899999997 6999988652      5889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------------ecccCc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------------IGTFGF  194 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------------~g~~~y  194 (227)
                      ..+..++.|++.||.|||   +.+++||||||+||+++.++.+                               .||+.|
T Consensus       112 ~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  188 (353)
T 2b9h_A          112 DHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY  188 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGG
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccc
Confidence            999999999999999999   8999999999999999876432                               357889


Q ss_pred             cccccccC-CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          195 IAPECITT-GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       195 ~aPE~~~~-~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +|||++.. ..++.++|||||||++|+|++|++|
T Consensus       189 ~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  222 (353)
T 2b9h_A          189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI  222 (353)
T ss_dssp             CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCC
Confidence            99998765 6689999999999999999999876

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=3.6e-28  Score=198.81  Aligned_cols=143  Identities=24%  Similarity=0.461  Sum_probs=119.0

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEee-------------CCcceeEeecccCCChhhhhcCCCCCC
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLE-------------TEVPILVFEFVACGTLADRIHDPNGSQ  139 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~~~  139 (227)
                      ||.+...... +.+.  +|+.++++++||||+++++++.+             .+..++||||+++|+|.+++....   
T Consensus        36 iK~~~~~~~~~~~~~--~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---  110 (303)
T 1zy4_A           36 IKKIRHTEEKLSTIL--SEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN---  110 (303)
T ss_dssp             EEEEEEEHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSC---
T ss_pred             EEEEeccHHHHHHHH--HHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccc---
Confidence            8887543222 4566  99999999999999999999865             345789999999999999997543   


Q ss_pred             CcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------------
Q 040292          140 LEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------------  188 (227)
Q Consensus       140 ~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------------  188 (227)
                       ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+                               
T Consensus       111 -~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  186 (303)
T 1zy4_A          111 -LNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN  186 (303)
T ss_dssp             -GGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC------------------
T ss_pred             -cccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccc
Confidence             26778889999999999999999   8999999999999999876532                               


Q ss_pred             ----ecccCccccccccCC-CCCchhhHHHHHHHHHHHHhCC
Q 040292          189 ----IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGK  225 (227)
Q Consensus       189 ----~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~  225 (227)
                          .|++.|+|||.+.+. .++.++||||||+++|+|+++.
T Consensus       187 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~  228 (303)
T 1zy4_A          187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPF  228 (303)
T ss_dssp             -------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhcc
Confidence                367789999999764 6899999999999999999853

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=4.4e-28  Score=217.58  Aligned_cols=147  Identities=23%  Similarity=0.409  Sum_probs=127.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEee------CCcceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLE------TEVPILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++..      ++..++||||+++|+|.+++......  ..++
T Consensus        44 VKvi~~~~~~~~~~~~~--~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~--~~ls  119 (676)
T 3qa8_A           44 IKQCRQELSPKNRERWC--LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC--CGLK  119 (676)
T ss_dssp             ECCCCSCCCHHHHHHHH--HHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCT--TCCC
T ss_pred             EEEecccCCHHHHHHHH--HHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccC--CCCC
Confidence            8887655333   3566  99999999999999999999765      66789999999999999999864422  2578


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-----------------------eecccCcccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------LIGTFGFIAPECIT  201 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-----------------------~~g~~~y~aPE~~~  201 (227)
                      +..+..++.|++.||.|||   +.+++||||||+||+++.++.                       ..||+.|+|||.+.
T Consensus       120 e~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~  196 (676)
T 3qa8_A          120 EGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLE  196 (676)
T ss_dssp             SSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSC
T ss_pred             HHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhc
Confidence            8889999999999999999   899999999999999986542                       15788999999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++||||+|+++|+|++|..|
T Consensus       197 ~~~~s~ksDIwSLGviLyeLltG~~P  222 (676)
T 3qa8_A          197 QKKYTVTVDYWSFGTLAFECITGFRP  222 (676)
T ss_dssp             CSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred             cCCCCchhHHHHHHHHHHHHHHCCCC
Confidence            88999999999999999999999877

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=1.5e-28  Score=207.79  Aligned_cols=143  Identities=9%  Similarity=0.069  Sum_probs=106.2

Q ss_pred             eEEEcCCCCc-----ccccchhH---HHHHhcCCCcccceeE-------EEEeeCC-----------------cceeEee
Q 040292           74 ISEFGDNLNT-----EEYYCFNC---IAFASQMSHKNILKFV-------GCCLETE-----------------VPILVFE  121 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~E---i~~l~~l~H~niv~l~-------g~~~~~~-----------------~~~lV~E  121 (227)
                      ||.+......     +.+.  +|   +..|+. +||||++++       +++...+                 ..++|||
T Consensus        92 vK~~~~~~~~~~~~~~~~~--~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  168 (371)
T 3q60_A           92 LKVFTMGAENSRSELERLH--EATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMP  168 (371)
T ss_dssp             EEEEECCSTTHHHHHHHHH--HHHHHHHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEEC
T ss_pred             EEEEEecccccccHHHHHH--HHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEec
Confidence            8998876542     3445  77   455666 799988755       4554332                 3799999


Q ss_pred             cccCCChhhhhcCCCCCCCcccCHHHH------HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------
Q 040292          122 FVACGTLADRIHDPNGSQLEPFLMKHR------LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------  188 (227)
Q Consensus       122 ~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------  188 (227)
                      |++ |+|.+++.....    .+.+..+      ..++.|++.||+|||   +++|+||||||+||+++.++.+       
T Consensus       169 ~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~  240 (371)
T 3q60_A          169 AAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSA  240 (371)
T ss_dssp             CCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEEECCGGG
T ss_pred             CCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEEEEecce
Confidence            998 899999975421    3344445      677799999999999   8999999999999999987643       


Q ss_pred             -----------ecccCccccccccC--CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -----------IGTFGFIAPECITT--GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -----------~g~~~y~aPE~~~~--~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                                 .+|+.|+|||++.+  ..++.++|||||||++|||++|+.|
T Consensus       241 a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P  292 (371)
T 3q60_A          241 LWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP  292 (371)
T ss_dssp             EEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             eeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence                       46788999999987  5789999999999999999999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.95  E-value=2.8e-28  Score=221.20  Aligned_cols=141  Identities=24%  Similarity=0.372  Sum_probs=118.9

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCc-----ceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEV-----PILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~-----~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......   +.+.  +|+.++++++||||+++++++...+.     .|+||||+++++|.+++..       .+++
T Consensus       111 iK~~~~~~~~~~~~~~~--~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~-------~l~~  181 (681)
T 2pzi_A          111 LKGLVHSGDAEAQAMAM--AERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ-------KLPV  181 (681)
T ss_dssp             EEESCSSCCHHHHHHHH--HHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C-------CCCH
T ss_pred             EEEeCccCCHHHHHHHH--HHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC-------CCCH
Confidence            8877654332   3455  99999999999999999999987665     6999999999999987753       5889


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC----------------ceecccCccccccccCCCCCchh
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----------------KLIGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~----------------~~~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ..+..++.|++.||.|||   +++|+||||||+||+++.+.                ...||+.|+|||++.+.. +.++
T Consensus       182 ~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~-~~~s  257 (681)
T 2pzi_A          182 AEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGP-TVAT  257 (681)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCS-CHHH
T ss_pred             HHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCCcEEEEecccchhcccCCccCCCccccCHHHHcCCC-CCce
Confidence            999999999999999999   89999999999999998642                225899999999987654 8999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |||||||++|+|++|.+|
T Consensus       258 Di~slG~~l~~l~~g~~~  275 (681)
T 2pzi_A          258 DIYTVGRTLAALTLDLPT  275 (681)
T ss_dssp             HHHHHHHHHHHHHSCCCE
T ss_pred             ehhhhHHHHHHHHhCCCC
Confidence            999999999999999765

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=3.3e-28  Score=201.98  Aligned_cols=146  Identities=21%  Similarity=0.324  Sum_probs=110.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCC-CcccceeEEEEee--------CCcceeEeecccCCChhhhhcCCCCCCCcc
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMS-HKNILKFVGCCLE--------TEVPILVFEFVACGTLADRIHDPNGSQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~  142 (227)
                      ||.+......  +.+.  +|+.++.++. ||||+++++++..        ....++||||+. |+|.+++......  .+
T Consensus        58 vK~~~~~~~~~~~~~~--~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~--~~  132 (337)
T 3ll6_A           58 LKRLLSNEEEKNRAII--QEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESR--GP  132 (337)
T ss_dssp             EEEEEESSHHHHHHHH--HHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTT--CS
T ss_pred             EEEecCCchHHHHHHH--HHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhcc--CC
Confidence            8887554333  4556  9999999995 9999999999953        234789999996 7999888642111  16


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCceeecCCCce--------------------------------
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRP--IVFRDIKPFTTHVNDNDKL--------------------------------  188 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~--i~H~dlkp~nil~~~~~~~--------------------------------  188 (227)
                      +++..+..++.|++.||.|||   +.+  ++||||||+||+++.++.+                                
T Consensus       133 ~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (337)
T 3ll6_A          133 LSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT  209 (337)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-----------------
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhcc
Confidence            899999999999999999999   888  9999999999999876533                                


Q ss_pred             -ecccCccccccc---cCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -IGTFGFIAPECI---TTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -~g~~~y~aPE~~---~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .||+.|+|||.+   .+..++.++||||||+++|+|++|+.|
T Consensus       210 ~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p  252 (337)
T 3ll6_A          210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP  252 (337)
T ss_dssp             --------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCC
T ss_pred             ccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence             277889999998   456688999999999999999999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=8.1e-28  Score=200.47  Aligned_cols=149  Identities=22%  Similarity=0.394  Sum_probs=121.9

Q ss_pred             eeecCCC--eEEEcCCCCcccccchhHHHHHhc--CCCcccceeEEEEeeCC----cceeEeecccCCChhhhhcCCCCC
Q 040292           67 GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQ--MSHKNILKFVGCCLETE----VPILVFEFVACGTLADRIHDPNGS  138 (227)
Q Consensus        67 ~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~--l~H~niv~l~g~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~  138 (227)
                      +..++..  ||.+... ..+.+.  +|+.++..  ++||||+++++++....    ..++||||+++|+|.+++...   
T Consensus        61 ~~~~~~~vavK~~~~~-~~~~~~--~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---  134 (342)
T 1b6c_B           61 GKWRGEEVAVKIFSSR-EERSWF--REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---  134 (342)
T ss_dssp             EEETTEEEEEEEECGG-GHHHHH--HHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC---
T ss_pred             EEEcCccEEEEEeCch-hHHHHH--HHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc---
Confidence            4444444  8887643 224555  88888877  79999999999998876    789999999999999999753   


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcC-----CCCeEEecCCCCceeecCCCce-------------------------
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGF-----SRPIVFRDIKPFTTHVNDNDKL-------------------------  188 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~-----~~~i~H~dlkp~nil~~~~~~~-------------------------  188 (227)
                         .+++..+..++.|++.||.|||...     +.+++||||||+||+++.++.+                         
T Consensus       135 ---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  211 (342)
T 1b6c_B          135 ---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR  211 (342)
T ss_dssp             ---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSC
T ss_pred             ---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccC
Confidence               5889999999999999999999321     4689999999999999876532                         


Q ss_pred             ecccCccccccccCCC------CCchhhHHHHHHHHHHHHhC
Q 040292          189 IGTFGFIAPECITTGN------CNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~------~~~~~DvwS~G~il~el~tg  224 (227)
                      .||+.|+|||.+.+..      ++.++||||||+++|||+||
T Consensus       212 ~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             CCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence            4788899999997653      23689999999999999999

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=2.5e-27  Score=206.99  Aligned_cols=144  Identities=19%  Similarity=0.226  Sum_probs=124.3

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCC-cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSH-KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+.......++.  +|+.++..++| +++..+..++...+..++||||+ +++|.+++.....    .+++..+..++
T Consensus        37 vK~~~~~~~~~~~~--~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~----~l~~~~~~~i~  109 (483)
T 3sv0_A           37 IKLENVKTKHPQLL--YESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSR----KLSLKTVLMLA  109 (483)
T ss_dssp             EEEEETTCSSCCHH--HHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT----CCCHHHHHHHH
T ss_pred             EEEeccccccHHHH--HHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcC----CCCHHHHHHHH
Confidence            88887776667777  99999999977 55556666677788889999999 8999999974332    68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeec---CCC----------------------------ceecccCcccccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVN---DND----------------------------KLIGTFGFIAPECIT  201 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~---~~~----------------------------~~~g~~~y~aPE~~~  201 (227)
                      .|++.||.|||   +++|+||||||+||+++   .++                            ...||+.|+|||.+.
T Consensus       110 ~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~  186 (483)
T 3sv0_A          110 DQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHL  186 (483)
T ss_dssp             HHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhc
Confidence            99999999999   89999999999999993   322                            225788999999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++|||||||++|||++|+.|
T Consensus       187 ~~~~s~~sDvwSlGvil~elltG~~P  212 (483)
T 3sv0_A          187 GIEQSRRDDLESLGYVLMYFLRGSLP  212 (483)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             CCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.94  E-value=1.4e-27  Score=199.63  Aligned_cols=145  Identities=19%  Similarity=0.265  Sum_probs=122.4

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcc------cceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKN------ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~n------iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++..... +.+.  +|+.++++++|+|      ++.+++++...+..++||||+ ++++.+++.....   .++++.
T Consensus        50 vK~~~~~~~~~~~~~--~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~---~~~~~~  123 (355)
T 2eu9_A           50 LKIIRNVGKYREAAR--LEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNF---QPYPLP  123 (355)
T ss_dssp             EEEECSCHHHHHHHH--HHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT---CCCCHH
T ss_pred             EEEEcccccchhHHH--HHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccC---CCCCHH
Confidence            8888654322 4566  8999999998776      899999999999999999999 5677777754321   268899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC-------------------CCc------------------ee
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND-------------------NDK------------------LI  189 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~-------------------~~~------------------~~  189 (227)
                      .+..++.|++.||.|||   +.+++||||||+||+++.                   ++.                  ..
T Consensus       124 ~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  200 (355)
T 2eu9_A          124 HVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIV  200 (355)
T ss_dssp             HHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSC
T ss_pred             HHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccccCCc
Confidence            99999999999999999   999999999999999932                   221                  25


Q ss_pred             cccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       190 g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       201 gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  238 (355)
T 2eu9_A          201 ATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTL  238 (355)
T ss_dssp             SCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCC
Confidence            88899999999988999999999999999999999987

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.94  E-value=1e-27  Score=198.90  Aligned_cols=144  Identities=18%  Similarity=0.245  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCC--CcccceeEEEEeeCCcceeEeecccC-CChhhhhcCCCCCCCcc
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMS--HKNILKFVGCCLETEVPILVFEFVAC-GTLADRIHDPNGSQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~  142 (227)
                      ||.+......        +.+.  +|+.++++++  ||||+++++++..++..++|+|++.+ ++|.+++....     .
T Consensus        73 vK~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~-----~  145 (320)
T 3a99_A           73 IKHVEKDRISDWGELPNGTRVP--MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----A  145 (320)
T ss_dssp             EEEEEGGGCCCEEECTTCCEEE--HHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-----S
T ss_pred             EEEEecccchhhhhhhhhhHHH--HHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC-----C
Confidence            8888654322        4556  9999999996  59999999999999999999999976 89999987543     6


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeec-CCCce-------------------ecccCccccccccC
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKL-------------------IGTFGFIAPECITT  202 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~-~~~~~-------------------~g~~~y~aPE~~~~  202 (227)
                      +++..+..++.|++.||.|||   +.+++||||||+||+++ +++.+                   .||+.|+|||++.+
T Consensus       146 l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~  222 (320)
T 3a99_A          146 LQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY  222 (320)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccccccCCCCCccCCChHHhcc
Confidence            889999999999999999999   89999999999999998 44322                   47888999999977


Q ss_pred             CCC-CchhhHHHHHHHHHHHHhCCCC
Q 040292          203 GNC-NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ~~~-~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..+ +.++||||||+++|||++|+.|
T Consensus       223 ~~~~~~~~Di~slG~il~el~~g~~p  248 (320)
T 3a99_A          223 HRYHGRSAAVWSLGILLYDMVCGDIP  248 (320)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCCccchHHhHHHHHHHHHHCCCC
Confidence            665 6789999999999999999876

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.94  E-value=6.9e-28  Score=198.73  Aligned_cols=144  Identities=22%  Similarity=0.253  Sum_probs=119.4

Q ss_pred             eEEEcCCCC--------cccccchhHHHHHhcC----CCcccceeEEEEeeCCcceeEeec-ccCCChhhhhcCCCCCCC
Q 040292           74 ISEFGDNLN--------TEEYYCFNCIAFASQM----SHKNILKFVGCCLETEVPILVFEF-VACGTLADRIHDPNGSQL  140 (227)
Q Consensus        74 vK~~~~~~~--------~~~~~~~~Ei~~l~~l----~H~niv~l~g~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~~  140 (227)
                      ||.+.....        ...+.  +|+.++.++    +||||+++++++...+..++|+|+ +.+++|.+++....    
T Consensus        61 vK~~~~~~~~~~~~~~~~~~~~--~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~----  134 (312)
T 2iwi_A           61 IKVIPRNRVLGWSPLSDSVTCP--LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG----  134 (312)
T ss_dssp             EEECCSTTTC--------CCCC--HHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHC----
T ss_pred             EEEEecccccccccchhhHHHH--HHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC----
Confidence            888865432        13455  899999998    899999999999999999999999 78899999997643    


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeec-CCCce-------------------ecccCccccccc
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVN-DNDKL-------------------IGTFGFIAPECI  200 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~-~~~~~-------------------~g~~~y~aPE~~  200 (227)
                       ++++..+..++.|++.||.|||   +.+++||||||+||+++ .++.+                   .|++.|+|||++
T Consensus       135 -~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~  210 (312)
T 2iwi_A          135 -PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWI  210 (312)
T ss_dssp             -SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCcccccCCcccccCceee
Confidence             6889999999999999999999   89999999999999998 44432                   478889999999


Q ss_pred             cCCCCC-chhhHHHHHHHHHHHHhCCCC
Q 040292          201 TTGNCN-EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~~~~~-~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+..+. .++||||||+++|+|++|+.|
T Consensus       211 ~~~~~~~~~~Di~slG~il~~l~~g~~p  238 (312)
T 2iwi_A          211 SRHQYHALPATVWSLGILLYDMVCGDIP  238 (312)
T ss_dssp             HHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ecCCCCCccchHHHHHHHHHHHHHCCCC
Confidence            776654 589999999999999999876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.94  E-value=1e-27  Score=198.99  Aligned_cols=148  Identities=19%  Similarity=0.282  Sum_probs=108.3

Q ss_pred             eEEEcCCCCc---ccccchhHHH-HHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIA-FASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.+......   .++.  +|+. +++.++||||+++++++..++..++||||+++ +|.+++..........+++..+.
T Consensus        52 iK~~~~~~~~~~~~~~~--~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~  128 (327)
T 3aln_A           52 VKRIRSTVDEKEQKQLL--MDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILG  128 (327)
T ss_dssp             EEEEECCCCHHHHHHHH--HHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHH
T ss_pred             EEEeecccCchHHHHHH--HHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHH
Confidence            8888765433   2333  6666 77788999999999999999999999999984 88777652100001268899999


Q ss_pred             HHHHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCCce--------------------ecccCccccccc----cCCC
Q 040292          150 KVAMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECI----TTGN  204 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~----~~~~  204 (227)
                      .++.|++.||.|||   +. +++||||||+||+++.++.+                    .||+.|+|||.+    .+..
T Consensus       129 ~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  205 (327)
T 3aln_A          129 KITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQG  205 (327)
T ss_dssp             HHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC------------------------------
T ss_pred             HHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCC
Confidence            99999999999999   77 99999999999999876543                    578889999998    4556


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||||+++|+|++|+.|
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~p  228 (327)
T 3aln_A          206 YDVRSDVWSLGITLYELATGRFP  228 (327)
T ss_dssp             CCSHHHHHHHHHHHHHHHHSCCC
T ss_pred             CCchhhHHHHHHHHHHHHHCCCC
Confidence            89999999999999999999876

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=1.8e-27  Score=196.43  Aligned_cols=143  Identities=23%  Similarity=0.330  Sum_probs=121.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCC--CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMS--HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......    +.+.  +|+.++.+++  ||||+++++++..++..++||| +.+++|.+++....     .+++..
T Consensus        57 vK~~~~~~~~~~~~~~~~--~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~-----~~~~~~  128 (313)
T 3cek_A           57 IKYVNLEEADNQTLDSYR--NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-----SIDPWE  128 (313)
T ss_dssp             EEEEECSSCCHHHHHHHH--HHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCS-----SCCHHH
T ss_pred             EEEeccccccccchHHHH--HHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcC-----CCCHHH
Confidence            8888654433    4566  9999999996  5999999999999999999999 55789999997643     688899


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc----------------------eecccCccccccccC---
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK----------------------LIGTFGFIAPECITT---  202 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~----------------------~~g~~~y~aPE~~~~---  202 (227)
                      +..++.|++.||.|||   +.+++||||||+||++++...                      ..|++.|+|||.+.+   
T Consensus       129 ~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  205 (313)
T 3cek_A          129 RKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS  205 (313)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC-
T ss_pred             HHHHHHHHHHHHHHHH---HCCceecCCCcccEEEECCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhccc
Confidence            9999999999999999   899999999999999965311                      147889999999865   


Q ss_pred             --------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 --------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 --------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                              ..++.++||||||+++|+|++|+.|
T Consensus       206 ~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p  238 (313)
T 3cek_A          206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP  238 (313)
T ss_dssp             ---------CCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccccccccCCchHHHHHHHHHHHHHHhCCCc
Confidence                    4678899999999999999999976

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.94  E-value=1.8e-27  Score=198.82  Aligned_cols=143  Identities=21%  Similarity=0.347  Sum_probs=106.8

Q ss_pred             eEEEcCCCCcccccchhHHH-HHhcCCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIA-FASQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~-~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....   ...  +|+. .++.++||||+++++++..    +...++||||+++|+|.+++.....   ..+++..+
T Consensus        59 vK~~~~~~---~~~--~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~  130 (336)
T 3fhr_A           59 LKLLYDSP---KAR--QEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGD---QAFTEREA  130 (336)
T ss_dssp             EEEEESSH---HHH--HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-C---CCCBHHHH
T ss_pred             EEEecCcH---HHH--HHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCC---CCCCHHHH
Confidence            88876432   222  4443 4566799999999999876    3457899999999999999986532   26899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc---e-------------------ecccCccccccccCCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK---L-------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~---~-------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.++.   +                   .||+.|+|||++....++
T Consensus       131 ~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  207 (336)
T 3fhr_A          131 AEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYD  207 (336)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC----------------------CHHH
T ss_pred             HHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCC
Confidence            999999999999999   899999999999999975331   1                   478889999999888889


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||||+++|+|++|+.|
T Consensus       208 ~~~Di~slG~il~~l~~g~~p  228 (336)
T 3fhr_A          208 KSCDMWSLGVIMYILLCGFPP  228 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCC
T ss_pred             chhhHHHHHHHHHHHHHCCCC
Confidence            999999999999999999987

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.94  E-value=9.3e-28  Score=202.33  Aligned_cols=145  Identities=21%  Similarity=0.268  Sum_probs=122.1

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-----------CcccceeEEEEeeCC----cceeEeecccCCChhhhhcCCCC
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-----------HKNILKFVGCCLETE----VPILVFEFVACGTLADRIHDPNG  137 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-----------H~niv~l~g~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~  137 (227)
                      ||.+...... +.+.  +|+.++++++           ||||+++++++...+    ..++|||++ +++|.+++.....
T Consensus        49 iK~~~~~~~~~~~~~--~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~  125 (373)
T 1q8y_A           49 MKIVRGDKVYTEAAE--DEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH  125 (373)
T ss_dssp             EEEECSCHHHHHHHH--HHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTT
T ss_pred             EEEecCCccchhhhh--HHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhc
Confidence            8888654322 4566  8999999886           899999999998654    688999999 8899999875331


Q ss_pred             CCCcccCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCC------------------------ceeccc
Q 040292          138 SQLEPFLMKHRLKVAMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDND------------------------KLIGTF  192 (227)
Q Consensus       138 ~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~------------------------~~~g~~  192 (227)
                         ..+++..+..++.|++.||.|||   ++ +++||||||+||+++.++                        ...||+
T Consensus       126 ---~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~  199 (373)
T 1q8y_A          126 ---RGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR  199 (373)
T ss_dssp             ---SCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCG
T ss_pred             ---cCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCCCCCCCc
Confidence               25888999999999999999999   87 999999999999994221                        125888


Q ss_pred             CccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       193 ~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .|+|||++.+..++.++|||||||++|||++|+.|
T Consensus       200 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  234 (373)
T 1q8y_A          200 EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL  234 (373)
T ss_dssp             GGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred             cccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence            99999999988899999999999999999999876

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=6.6e-28  Score=214.44  Aligned_cols=137  Identities=16%  Similarity=0.111  Sum_probs=103.5

Q ss_pred             eEEEcCCCCc------------ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCC
Q 040292           74 ISEFGDNLNT------------EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQL  140 (227)
Q Consensus        74 vK~~~~~~~~------------~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~  140 (227)
                      ||.+......            ++|.  +|+++|+++ .|+||+++++++.+++..||||||++|++|.+++...+    
T Consensus       264 ~K~~~~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~----  337 (569)
T 4azs_A          264 CKFFYYDMPHGILTAEESQRNKYELH--NEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE----  337 (569)
T ss_dssp             EEEEESSCSTTCSCHHHHHHHHHHHH--HHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC----
T ss_pred             EEEEecccccccchhhhhHHHHHHHH--HHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC----
Confidence            8888754211            3577  999999999 89999999999999999999999999999999998754    


Q ss_pred             cccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccc
Q 040292          141 EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPEC  199 (227)
Q Consensus       141 ~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~  199 (227)
                       +++..   .|+.||+.||+|+|   +++|+||||||+|||+++++.+                     +||++|+|||+
T Consensus       338 -~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~  410 (569)
T 4azs_A          338 -EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNEL  410 (569)
T ss_dssp             -CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHH
T ss_pred             -CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHH
Confidence             56554   47899999999999   9999999999999999987754                     58999999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                      +.+ .+..++|+||+|++++++.++
T Consensus       411 l~g-~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          411 FAE-NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             C------------------CCCCTT
T ss_pred             hCC-CCCCcccccccccchhhhccc
Confidence            865 456789999999988776554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=5.2e-27  Score=193.59  Aligned_cols=146  Identities=20%  Similarity=0.324  Sum_probs=115.0

Q ss_pred             eEEEcCCCCcc-cccch-hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTE-EYYCF-NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~-~~~~~-~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......+ ..... ++..+++.++||||+++++++..++..++||||+ ++.+..+.....    .++++..+..+
T Consensus        55 vK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~----~~~~~~~~~~~  129 (318)
T 2dyl_A           55 VKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQ----GPIPERILGKM  129 (318)
T ss_dssp             EEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHT----SCCCHHHHHHH
T ss_pred             EEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhc----cCCCHHHHHHH
Confidence            89887654432 11111 4445788889999999999999999999999999 455555444222    26889999999


Q ss_pred             HHHHHHHHHHhhhcCCC-CeEEecCCCCceeecCCCce--------------------ecccCcccccccc-----CCCC
Q 040292          152 AMEIANAVAYLHVGFSR-PIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT-----TGNC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~-~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~-----~~~~  205 (227)
                      +.|++.||.|||   +. +++|+||||+||+++.++.+                    .|++.|+|||.+.     ...+
T Consensus       130 ~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  206 (318)
T 2dyl_A          130 TVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY  206 (318)
T ss_dssp             HHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCTTCCHHHHC--------C
T ss_pred             HHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCC
Confidence            999999999999   74 99999999999999876543                    4788999999994     4567


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||||+++|+|++|+.|
T Consensus       207 ~~~~Di~slG~il~~l~~g~~p  228 (318)
T 2dyl_A          207 DIRADVWSLGISLVELATGQFP  228 (318)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccchhhHHHHHHHHHhCCCC
Confidence            8999999999999999999876

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=7.1e-27  Score=198.30  Aligned_cols=147  Identities=20%  Similarity=0.247  Sum_probs=121.9

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-Cc-----ccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-HK-----NILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-H~-----niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++..... +++.  +|+.+++.++ |+     +|+++++++...+..++||||+. ++|.+++.....   ..+++.
T Consensus        84 iK~~~~~~~~~~~~~--~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~  157 (382)
T 2vx3_A           84 IKIIKNKKAFLNQAQ--IEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNF---RGVSLN  157 (382)
T ss_dssp             EEEECSSHHHHHHHH--HHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTT---SCCCHH
T ss_pred             EEEEeccHHHHHHHH--HHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCc---CCCCHH
Confidence            8888644322 4455  7888888874 55     49999999999999999999996 599999875431   258899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC--CCc------------------eecccCccccccccCCCCC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND--NDK------------------LIGTFGFIAPECITTGNCN  206 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~--~~~------------------~~g~~~y~aPE~~~~~~~~  206 (227)
                      .+..++.|++.||.|||.. ..+|+||||||+||+++.  ++.                  ..||+.|+|||++.+..++
T Consensus       158 ~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  236 (382)
T 2vx3_A          158 LTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYD  236 (382)
T ss_dssp             HHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCC
Confidence            9999999999999999932 468999999999999954  222                  1588899999999998999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|||||||++|||++|++|
T Consensus       237 ~~~DiwSlG~il~elltg~~p  257 (382)
T 2vx3_A          237 LAIDMWSLGCILVEMHTGEPL  257 (382)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             cHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999987

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.94  E-value=4.6e-28  Score=202.06  Aligned_cols=143  Identities=11%  Similarity=0.068  Sum_probs=114.2

Q ss_pred             eEEEcCCCCc----------ccccchhHHHHHhcCC---------CcccceeEEEEe-----------------e-----
Q 040292           74 ISEFGDNLNT----------EEYYCFNCIAFASQMS---------HKNILKFVGCCL-----------------E-----  112 (227)
Q Consensus        74 vK~~~~~~~~----------~~~~~~~Ei~~l~~l~---------H~niv~l~g~~~-----------------~-----  112 (227)
                      ||.+......          +.+.  +|+.++++++         ||||+++.+++.                 .     
T Consensus        48 vK~~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~  125 (336)
T 2vuw_A           48 IKIIAIEGPDLVNGSHQKTFEEIL--PEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSA  125 (336)
T ss_dssp             EEEEEESCSSCBTTBCCBCHHHHH--HHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCS
T ss_pred             EEEEecCCccccccccchhHHHHH--HHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhcccc
Confidence            8988765321          4455  8999988885         666666666542                 2     


Q ss_pred             --------CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC
Q 040292          113 --------TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND  184 (227)
Q Consensus       113 --------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~  184 (227)
                              .+..++||||+++|++.+.+...      .+++..+..++.|++.||+|||+  +++|+||||||+||+++.
T Consensus       126 ~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~------~~~~~~~~~i~~qi~~aL~~lH~--~~~ivHrDlKp~NILl~~  197 (336)
T 2vuw_A          126 NDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK------LSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHWGNVLLKK  197 (336)
T ss_dssp             SCCSCCCCTTCEEEEEEEECCCEETGGGTTT------CCCHHHHHHHHHHHHHHHHHHHH--HHCCBCSCCCGGGEEEEE
T ss_pred             ccCccccccCeEEEEEEecCCCccHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHH--hCCEeECCCCHHHEEEec
Confidence                    67889999999999877776431      57899999999999999999993  478999999999999987


Q ss_pred             CC--------------------ce----------------ecccCccccccccCCCCCchhhHHHHHHH-HHHHHhCCCC
Q 040292          185 ND--------------------KL----------------IGTFGFIAPECITTGNCNEKSDVYSFGAL-LLELLTGKKG  227 (227)
Q Consensus       185 ~~--------------------~~----------------~g~~~y~aPE~~~~~~~~~~~DvwS~G~i-l~el~tg~~p  227 (227)
                      ++                    .+                +||+.|+|||++.+.. +.++||||++++ .+++++|..|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p  276 (336)
T 2vuw_A          198 TSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHP  276 (336)
T ss_dssp             CSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCT
T ss_pred             cCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCC
Confidence            65                    22                5899999999998666 899999998777 6667777765

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=1.3e-25  Score=184.33  Aligned_cols=141  Identities=24%  Similarity=0.398  Sum_probs=115.2

Q ss_pred             eEEEcCCCCcccccchhHHHHH-hcCCCcccceeEEEEee----CCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFA-SQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l-~~l~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+..   ...+.  +|+.++ +..+||||+++++++..    ....++||||+++|+|.+++.....   .++++..+
T Consensus        48 iK~~~~---~~~~~--~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~  119 (299)
T 3m2w_A           48 LKMLQD---CPKAR--REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREA  119 (299)
T ss_dssp             EEEEEC---SHHHH--HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTT---CCCBHHHH
T ss_pred             EEEecc---cHHHH--HHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccC---CCCCHHHH
Confidence            787753   23455  899887 55699999999999976    5678999999999999999976432   25889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC---CCce-ecccCccccccccCCCCCchhhHHHHHHHHHHHHhC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND---NDKL-IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTG  224 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~---~~~~-~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg  224 (227)
                      ..++.|++.||.|||   +.+++||||||+||+++.   ++.+ ++.++.  .+...+..++.++||||+||++|+|++|
T Consensus       120 ~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~--a~~~~~~~~~~~~DiwslG~il~el~tg  194 (299)
T 3m2w_A          120 SEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTGEKYDKSCDMWSLGVIMYILLCG  194 (299)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTT--CEECTTCGGGGHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccc--ccccccccCCchhhHHHHHHHHHHHHHC
Confidence            999999999999999   899999999999999997   3333 333332  2334456688999999999999999999


Q ss_pred             CCC
Q 040292          225 KKG  227 (227)
Q Consensus       225 ~~p  227 (227)
                      +.|
T Consensus       195 ~~p  197 (299)
T 3m2w_A          195 YPP  197 (299)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            876

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.90  E-value=4.4e-24  Score=183.07  Aligned_cols=147  Identities=14%  Similarity=0.158  Sum_probs=107.4

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCC-cccce---------------------eEEEEee-----CCcceeEee
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSH-KNILK---------------------FVGCCLE-----TEVPILVFE  121 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H-~niv~---------------------l~g~~~~-----~~~~~lV~E  121 (227)
                      ||.+......     +.+.  +|+.+++.++| +|...                     +..++..     ....+++|+
T Consensus       108 vK~~~~~~~~~~~~~~~~~--~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (413)
T 3dzo_A          108 VHVPYFTERPPSNAIKQMK--EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYP  185 (413)
T ss_dssp             EEEECCSCC----CCHHHH--HHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEE
T ss_pred             EEEEecCCCccHHHHHHHH--HHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEee
Confidence            8888743322     4566  99999999977 32211                     1111111     123567777


Q ss_pred             cccCCChhhhhcCCC--CCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------
Q 040292          122 FVACGTLADRIHDPN--GSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------  188 (227)
Q Consensus       122 ~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------  188 (227)
                      ++ +++|.+++....  .....++++..+..++.|++.||+|||   +++|+||||||+||+++.++.+           
T Consensus       186 ~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~  261 (413)
T 3dzo_A          186 RM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD  261 (413)
T ss_dssp             CC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred             hh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEeccceeec
Confidence            66 589998884110  001126788899999999999999999   9999999999999999987643           


Q ss_pred             -------ecccCccccccc----------cCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -------IGTFGFIAPECI----------TTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -------~g~~~y~aPE~~----------~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                             +| +.|+|||++          ....++.++|||||||++|||++|+.|
T Consensus       262 ~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P  316 (413)
T 3dzo_A          262 GASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP  316 (413)
T ss_dssp             TEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred             CCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence                   46 899999999          445588899999999999999999987

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.82  E-value=2.3e-21  Score=171.42  Aligned_cols=123  Identities=12%  Similarity=0.107  Sum_probs=105.0

Q ss_pred             ccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           86 YYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        86 ~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      +.  +|+.++++++||||+++..++...+..++||||+++++|.+++..             +..++.|+++||.|||  
T Consensus       386 ~~--~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH--  448 (540)
T 3en9_A          386 TA--REARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH--  448 (540)
T ss_dssp             HH--HHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH--
T ss_pred             HH--HHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH--
Confidence            56  999999999999999776777778888999999999999999874             3478999999999999  


Q ss_pred             CCCCeEEecCCCCceeecCCC--------------------------ceecccCccccccccC--CCCCchhhHHHHHHH
Q 040292          166 FSRPIVFRDIKPFTTHVNDND--------------------------KLIGTFGFIAPECITT--GNCNEKSDVYSFGAL  217 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~~~~--------------------------~~~g~~~y~aPE~~~~--~~~~~~~DvwS~G~i  217 (227)
                       +++|+||||||+||+++..-                          ...||+.|+|||++..  ..|+..+|+||..+-
T Consensus       449 -~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~  527 (540)
T 3en9_A          449 -KNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILE  527 (540)
T ss_dssp             -HTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHH
T ss_pred             -HCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHH
Confidence             89999999999999998610                          1158899999999976  457888899999988


Q ss_pred             HHHHHhCCC
Q 040292          218 LLELLTGKK  226 (227)
Q Consensus       218 l~el~tg~~  226 (227)
                      ..+.+.++.
T Consensus       528 ~l~~v~~r~  536 (540)
T 3en9_A          528 LMKDVERRA  536 (540)
T ss_dssp             HHHHHHTCS
T ss_pred             HHHHHHhcc
Confidence            888776543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.58  E-value=6.9e-16  Score=125.71  Aligned_cols=94  Identities=16%  Similarity=0.108  Sum_probs=75.0

Q ss_pred             ccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc
Q 040292           86 YYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG  165 (227)
Q Consensus        86 ~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~  165 (227)
                      +.  +|+.++++++  | +++.+++. .+..++||||+++++|.+ +..           .....++.|++.||.|||  
T Consensus       151 ~~--~E~~~l~~l~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH--  210 (282)
T 1zar_A          151 AR--NEFRALQKLQ--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY--  210 (282)
T ss_dssp             HH--HHHHHHHHTT--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH--
T ss_pred             HH--HHHHHHHhcc--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH--
Confidence            55  9999999999  4 66666543 356799999999999998 421           123469999999999999  


Q ss_pred             CCCCeEEecCCCCceeecCCCce--------ecccCcccccccc
Q 040292          166 FSRPIVFRDIKPFTTHVNDNDKL--------IGTFGFIAPECIT  201 (227)
Q Consensus       166 ~~~~i~H~dlkp~nil~~~~~~~--------~g~~~y~aPE~~~  201 (227)
                       +.+++||||||+||+++ ++.+        ..+..+.|||++.
T Consensus       211 -~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~~~~a~e~l~  252 (282)
T 1zar_A          211 -HRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEEGWREILE  252 (282)
T ss_dssp             -HTTEECSCCSTTSEEEE-TTEEEECCCTTCEETTSTTHHHHHH
T ss_pred             -HCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECCCCCHHHHHH
Confidence             99999999999999999 6544        3455688999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.19  E-value=2e-11  Score=97.91  Aligned_cols=90  Identities=12%  Similarity=0.087  Sum_probs=65.9

Q ss_pred             hhHHHHHhcCCCccc--ceeEEEEeeCCcceeEeecccC-C----ChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHH
Q 040292           89 FNCIAFASQMSHKNI--LKFVGCCLETEVPILVFEFVAC-G----TLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAY  161 (227)
Q Consensus        89 ~~Ei~~l~~l~H~ni--v~l~g~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~  161 (227)
                      .+|+.+|.++.|+++  ..+++.    +..+|||||+.+ |    +|.+...        ..++..+..++.|++.||.|
T Consensus       118 ~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~--------~~~~~~~~~i~~qi~~~l~~  185 (258)
T 1zth_A          118 EKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGR--------ELKELDVEGIFNDVVENVKR  185 (258)
T ss_dssp             HHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGG--------GGGGSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhh--------ccChHHHHHHHHHHHHHHHH
Confidence            389999999988764  344432    367899999942 4    5555443        12345677899999999999


Q ss_pred             hhhcCCCCeEEecCCCCceeecCCCceecccC
Q 040292          162 LHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFG  193 (227)
Q Consensus       162 LH~~~~~~i~H~dlkp~nil~~~~~~~~g~~~  193 (227)
                      ||.  ..+++||||||+||+++. ...+..++
T Consensus       186 lH~--~~givHrDlkp~NILl~~-~~~liDFG  214 (258)
T 1zth_A          186 LYQ--EAELVHADLSEYNIMYID-KVYFIDMG  214 (258)
T ss_dssp             HHH--TSCEECSSCSTTSEEESS-SEEECCCT
T ss_pred             HHH--HCCEEeCCCCHHHEEEcC-cEEEEECc
Confidence            995  578999999999999987 43344433

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.98  E-value=2e-10  Score=97.02  Aligned_cols=58  Identities=9%  Similarity=0.159  Sum_probs=47.5

Q ss_pred             cceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC
Q 040292          115 VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND  186 (227)
Q Consensus       115 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~  186 (227)
                      ..+|||||++|++|..+...           .....++.|++.+|.+||   ..+++||||||.|||+++++
T Consensus       185 ~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          185 RHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEK  242 (397)
T ss_dssp             TTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEE
T ss_pred             CceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCC
Confidence            34799999998888765431           123467899999999999   89999999999999998765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.62  E-value=7.7e-08  Score=76.62  Aligned_cols=79  Identities=9%  Similarity=-0.024  Sum_probs=59.8

Q ss_pred             eEEEcCC--CCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDN--LNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      +|.....  .....+.  +|+.+++.+ .+.++.++++++...+..|+||||++|.+|.+.+...          .....
T Consensus        42 lK~~~~~~~~~~~~~~--~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~----------~~~~~  109 (263)
T 3tm0_A           42 LKMTDSRYKGTTYDVE--REKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDE----------QSPEK  109 (263)
T ss_dssp             EEEECGGGTTSTTCHH--HHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCTT----------TCHHH
T ss_pred             EEeCCcccCCCHHHHH--HHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccCCc----------ccHHH
Confidence            7777542  2234567  999999988 4677889999998888999999999999988764211          12346


Q ss_pred             HHHHHHHHHHHhhh
Q 040292          151 VAMEIANAVAYLHV  164 (227)
Q Consensus       151 i~~~i~~gl~~LH~  164 (227)
                      ++.+++++|..||.
T Consensus       110 ~~~~l~~~l~~LH~  123 (263)
T 3tm0_A          110 IIELYAECIRLFHS  123 (263)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC
Confidence            77889999999995

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.43  E-value=6.4e-07  Score=70.71  Aligned_cols=75  Identities=15%  Similarity=0.052  Sum_probs=51.5

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcc--cceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKN--ILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      +|..... ....+.  +|+.+++.+.+.+  +.+++++...++..++||||++|.++.  ...        ..   ...+
T Consensus        49 lK~~~~~-~~~~~~--~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~--------~~---~~~~  112 (264)
T 1nd4_A           49 VKTDLSG-ALNELQ--DEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH--------LA---PAEK  112 (264)
T ss_dssp             EEEECSC-TTSCHH--HHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC--------CC---HHHH
T ss_pred             EEeCCcc-cchhhh--HHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc--------CC---HhHH
Confidence            6665543 335566  9999999885434  556888888777889999999998874  211        11   1245


Q ss_pred             HHHHHHHHHHhhh
Q 040292          152 AMEIANAVAYLHV  164 (227)
Q Consensus       152 ~~~i~~gl~~LH~  164 (227)
                      +.+++..|..||.
T Consensus       113 ~~~l~~~l~~lh~  125 (264)
T 1nd4_A          113 VSIMADAMRRLHT  125 (264)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhC
Confidence            6677777777773

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.40  E-value=4.1e-07  Score=75.88  Aligned_cols=72  Identities=15%  Similarity=0.200  Sum_probs=55.6

Q ss_pred             ccccchhHHHHHhcCC--CcccceeEEEEeeC---CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHH
Q 040292           84 EEYYCFNCIAFASQMS--HKNILKFVGCCLET---EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA  158 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~---~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~g  158 (227)
                      ..+.  +|+.+++.+.  +.++.+++.++.+.   +..++||||++|.++.+...       ..++..++..++.++++.
T Consensus        81 ~~~~--~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~  151 (359)
T 3dxp_A           81 HAIE--REYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSL-------PGMSPAERTAIYDEMNRV  151 (359)
T ss_dssp             -CHH--HHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTC-------TTCCHHHHHHHHHHHHHH
T ss_pred             HHHH--HHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCcc-------ccCCHHHHHHHHHHHHHH
Confidence            4566  8999999886  45688899988776   34789999999887754221       145677788899999999


Q ss_pred             HHHhhh
Q 040292          159 VAYLHV  164 (227)
Q Consensus       159 l~~LH~  164 (227)
                      |..||.
T Consensus       152 La~LH~  157 (359)
T 3dxp_A          152 IAAMHT  157 (359)
T ss_dssp             HHHHHH
T ss_pred             HHHHhC
Confidence            999995

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.10  E-value=1.4e-06  Score=70.88  Aligned_cols=82  Identities=12%  Similarity=0.126  Sum_probs=49.5

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcc--cceeEEEEeeCC---cceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKN--ILKFVGCCLETE---VPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~n--iv~l~g~~~~~~---~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      +|..........+.  +|+.+|+.+ .+..  +.+++......+   ..|+|||+++|.++.+....       .++..+
T Consensus        45 lR~~~~~~~~~~~~--~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~~-------~l~~~~  115 (304)
T 3sg8_A           45 FKFPKHSRGSTNLF--NEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLLN-------NLPKQS  115 (304)
T ss_dssp             EEEESSHHHHHHHH--HHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHHH-------TSCHHH
T ss_pred             EEecCCcchHHHHH--HHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccccc-------cCCHHH
Confidence            55543321224566  999999887 3332  345555443333   35789999998887653221       345556


Q ss_pred             HHHHHHHHHHHHHHhhh
Q 040292          148 RLKVAMEIANAVAYLHV  164 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~  164 (227)
                      +..++.+++..+..||.
T Consensus       116 ~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A          116 QNQAAKDLARFLSELHS  132 (304)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            66677777777777763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.54  E-value=0.0001  Score=58.50  Aligned_cols=78  Identities=6%  Similarity=-0.009  Sum_probs=50.1

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      +|.-... ...++.  +|...|+.+ .+-.+.++++++...+..++|||+++|.++.+....         .......+.
T Consensus        55 lk~~~~~-~~~~~~--~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~---------~~~~~~~~~  122 (272)
T 4gkh_A           55 LKHGKGS-VANDVT--DEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE---------YPDSGENIV  122 (272)
T ss_dssp             EEEEETH-HHHHHH--HHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH---------CGGGHHHHH
T ss_pred             EEECCCC-CHhHHH--HHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC---------CHHHHHHHH
Confidence            5554322 224566  899988887 344477889999988999999999998877664421         111223444


Q ss_pred             HHHHHHHHHhh
Q 040292          153 MEIANAVAYLH  163 (227)
Q Consensus       153 ~~i~~gl~~LH  163 (227)
                      .+++..|.-||
T Consensus       123 ~~l~~~L~~Lh  133 (272)
T 4gkh_A          123 DALAVFLRRLH  133 (272)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            55555555555

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.43  E-value=0.00018  Score=58.61  Aligned_cols=45  Identities=18%  Similarity=0.175  Sum_probs=33.0

Q ss_pred             ccccchhHHHHHhcCCCc---ccceeEEEEe-eCCcceeEeecccCCChhh
Q 040292           84 EEYYCFNCIAFASQMSHK---NILKFVGCCL-ETEVPILVFEFVACGTLAD  130 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~H~---niv~l~g~~~-~~~~~~lV~E~~~~gsL~~  130 (227)
                      ..+.  +|..+|+.+.+.   .+.+++.++. ..+..++|||+++|.++.+
T Consensus        54 ~~~~--~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           54 DELN--KEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             HHHH--HHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             HHHH--HHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            4566  999999998642   3556666664 3455789999999888765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.32  E-value=0.0087  Score=49.29  Aligned_cols=45  Identities=7%  Similarity=0.021  Sum_probs=32.9

Q ss_pred             ccccchhHHHHHhcCC-C--cccceeEEEEeeC---CcceeEeecccCCChhh
Q 040292           84 EEYYCFNCIAFASQMS-H--KNILKFVGCCLET---EVPILVFEFVACGTLAD  130 (227)
Q Consensus        84 ~~~~~~~Ei~~l~~l~-H--~niv~l~g~~~~~---~~~~lV~E~~~~gsL~~  130 (227)
                      ..+.  +|+.+++.+. +  ..+.+++.++...   +..++|||+++|.++.+
T Consensus        72 ~~~~--~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~  122 (357)
T 3ats_A           72 YRLD--HQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPD  122 (357)
T ss_dssp             CCHH--HHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCB
T ss_pred             hHHH--HHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhh
Confidence            4556  8999988883 2  3577888887655   35689999999877654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.97  E-value=0.014  Score=44.99  Aligned_cols=90  Identities=16%  Similarity=0.120  Sum_probs=57.9

Q ss_pred             CChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCcee--------cccCcccc
Q 040292          126 GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI--------GTFGFIAP  197 (227)
Q Consensus       126 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~~--------g~~~y~aP  197 (227)
                      -||.+.|...+.    |+++.+++.++.|.+.+|.-+-.  ...-..+=..|..+++..+|.+.        ....+.+|
T Consensus        33 vSL~eIL~~~~~----PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~~~s~~~~~~~~~p  106 (229)
T 2yle_A           33 LSLEEILRLYNQ----PINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVAG  106 (229)
T ss_dssp             EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECCC------------
T ss_pred             ccHHHHHHHcCC----CcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceecccccccccccCCCCh
Confidence            478888887663    99999999999999999877621  11101222345677787777652        12236677


Q ss_pred             ccccCCCCCchhhHHHHHHHHHHHH
Q 040292          198 ECITTGNCNEKSDVYSFGALLLELL  222 (227)
Q Consensus       198 E~~~~~~~~~~~DvwS~G~il~el~  222 (227)
                      |... ...+.+.-|||+|+++|.-+
T Consensus       107 e~~~-~~~te~~~IysLG~tLY~AL  130 (229)
T 2yle_A          107 KLGY-SQCMETEVIESLGIIIYKAL  130 (229)
T ss_dssp             CCSS-SSSCHHHHHHHHHHHHHHHH
T ss_pred             hhcc-ccchHHHHHHHHHHHHHHHh
Confidence            7663 33467889999999999765

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=87.79  E-value=1.2  Score=35.32  Aligned_cols=37  Identities=11%  Similarity=0.195  Sum_probs=22.7

Q ss_pred             hHHHHHhcCCCccc-ceeEEEEeeCCcceeEeecc-cCCCh
Q 040292           90 NCIAFASQMSHKNI-LKFVGCCLETEVPILVFEFV-ACGTL  128 (227)
Q Consensus        90 ~Ei~~l~~l~H~ni-v~l~g~~~~~~~~~lV~E~~-~~gsL  128 (227)
                      +|+.+++.+....+ .++++++  .+.-++++||+ ++.++
T Consensus        57 ~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l   95 (301)
T 3dxq_A           57 NEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM   95 (301)
T ss_dssp             HHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred             HHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence            78887777632222 4566543  33457899999 65444

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=81.88  E-value=1.6  Score=35.36  Aligned_cols=52  Identities=8%  Similarity=-0.022  Sum_probs=38.0

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCC---CcccceeEEEEeeCCcceeEeecccCCCh
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMS---HKNILKFVGCCLETEVPILVFEFVACGTL  128 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~g~~~~~~~~~lV~E~~~~gsL  128 (227)
                      +|..... ....+.  +|...|+.+.   ...+.+++.++...+..++||||+++.++
T Consensus        64 lK~~~~~-~~~~~~--~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           64 VKINERS-YRSMFR--AEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EEEEEGG-GHHHHH--HHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             EEeCCcc-cHHHHH--HHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            5554432 234566  8988888872   35688889888877889999999998654

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=81.05  E-value=0.067  Score=46.17  Aligned_cols=30  Identities=10%  Similarity=-0.120  Sum_probs=25.7

Q ss_pred             cccccchhHHHHHhcCCCcccceeEEEEeeCC
Q 040292           83 TEEYYCFNCIAFASQMSHKNILKFVGCCLETE  114 (227)
Q Consensus        83 ~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~  114 (227)
                      .++|.  .|++.+++++|+|+|++.|||....
T Consensus       323 ~~eF~--~Eve~L~~i~HrNLV~L~gyC~s~~  352 (487)
T 3oja_A          323 SETER--LECERENQARQREIDALKEQYRTVI  352 (487)
T ss_dssp             --CHH--HHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred             HHHHH--HHHHHHhcccccchhhHHHHhcChH
Confidence            35788  9999999999999999999997654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	227
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-28
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-27
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-26
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-26
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-25
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-24
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-23
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-23
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-23
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-23
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-22
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-22
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-21
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-21
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-21
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-21
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-21
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-21
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-21
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-20
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	8e-20
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-18
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-18
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-18
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-17
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-17
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-17
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-17
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-17
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-16
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	5e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-16
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-16
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-13
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-13
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-13
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-13
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-10
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-08
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	4e-04

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 3e-28
 Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 26/153 (16%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +    + +   I+ F G         +  E +  G+L   +             +   KV
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-----RIPEQILGKV 109

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTF 192
           ++ +   + YL       I+ RD+KP    VN   ++                   +GT 
Sbjct: 110 SIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR 167

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            +++PE +   + + +SD++S G  L+E+  G+
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 2e-27
 Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 34/161 (21%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +    +  H NIL F+G     ++  +V ++    +L   +H         F M   + +
Sbjct: 55  VGVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIET----KFEMIKLIDI 109

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-----------------------DKL 188
           A + A  + YLH    + I+ RD+K     ++++                       ++L
Sbjct: 110 ARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 166

Query: 189 IGTFGFIAPECITTGNCN---EKSDVYSFGALLLELLTGKK 226
            G+  ++APE I   + N    +SDVY+FG +L EL+TG+ 
Sbjct: 167 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 3e-26
 Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 25/154 (16%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
            +  +Q+ H N+++ +G  +E +  + +V E++A G+L D +     S L        LK
Sbjct: 51  ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG---DCLLK 107

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN------------------DKLIGTF 192
            ++++  A+ YL        V RD+      V+++                  D      
Sbjct: 108 FSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 164

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            + APE +     + KSDV+SFG LL E+ +  +
Sbjct: 165 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 198

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 9e-26
 Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 27/153 (17%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +   S + H NIL+  G   +     L+ E+   GT+   +   +      F  +     
Sbjct: 57  VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRTATY 111

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTF 192
             E+ANA++Y H   S+ ++ RDIKP    +    +L                    GT 
Sbjct: 112 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL 168

Query: 193 GFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            ++ PE I     +EK D++S G L  E L GK
Sbjct: 169 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 201

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.4 bits (242), Expect = 4e-25
 Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 29/157 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
                Q+ H+ +++      +  +  ++ E++  G+L D +  P+G +L        L +
Sbjct: 59  ANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIKLTIN---KLLDM 114

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND--NDKLI-------------------- 189
           A +IA  +A++     R  + RD++     V+D  + K+                     
Sbjct: 115 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
               + APE I  G    KSDV+SFG LL E++T  +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.6 bits (240), Expect = 1e-24
 Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 30/155 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    +  + NI+ ++   L  +   +V E++A G+L D + +    +           V
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE------GQIAAV 121

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IG 190
             E   A+ +LH   S  ++ RDIK     +  +  +                     +G
Sbjct: 122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE +T      K D++S G + +E++ G+
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.5 bits (232), Expect = 1e-23
 Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 32/158 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I     ++H+N++KF G   E  +  L  E+ + G L DRI    G            + 
Sbjct: 54  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRF 108

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------- 188
             ++   V YLH      I  RDIKP    +++ D L                       
Sbjct: 109 FHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 165

Query: 189 IGTFGFIAPECITTGNCN-EKSDVYSFGALLLELLTGK 225
            GT  ++APE +     + E  DV+S G +L  +L G+
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.1 bits (231), Expect = 2e-23
 Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 26/159 (16%)

Query: 92  IAFASQMSHKNILKFVGCCLETE--VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
           +    ++ H NI+++    ++       +V E+   G LA  I      + +    +  L
Sbjct: 54  VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK-GTKERQYLDEEFVL 112

Query: 150 KVAMEIANAVAYLH--VGFSRPIVFRDIKPFTTHVNDNDKL-IGTFG------------- 193
           +V  ++  A+   H        ++ RD+KP    ++    + +G FG             
Sbjct: 113 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 172

Query: 194 -------FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                  +++PE +   + NEKSD++S G LL EL    
Sbjct: 173 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 211

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 93.6 bits (232), Expect = 3e-23
 Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 29/156 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   S + H  ++       +    ++++EF++ G L +++ D +            ++ 
Sbjct: 74  IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN----KMSEDEAVEY 129

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP----FTTHVNDNDKLI------------------ 189
             ++   + ++H       V  D+KP    FTT  ++  KLI                  
Sbjct: 130 MRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT 186

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           GT  F APE          +D++S G L   LL+G 
Sbjct: 187 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 222

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.1 bits (228), Expect = 5e-23
 Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 32/159 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
                Q+ +  I++ +G C + E  +LV E    G L   +            + +  ++
Sbjct: 60  AQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE----EIPVSNVAEL 114

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI---------------------- 189
             +++  + YL     +  V RD+      + +                           
Sbjct: 115 LHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 171

Query: 190 --GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                 + APECI     + +SDV+S+G  + E L+  +
Sbjct: 172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 210

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.9 bits (225), Expect = 1e-22
 Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 33/159 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
                Q+ +  I++ +G C E E  +LV E    G L   +             K+ +++
Sbjct: 59  ANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-----HVKDKNIIEL 112

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------- 188
             +++  + YL        V RD+      +                             
Sbjct: 113 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                 + APECI     + KSDV+SFG L+ E  +  +
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 208

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.2 bits (226), Expect = 1e-22
 Identities = 34/154 (22%), Positives = 54/154 (35%), Gaps = 28/154 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           + F  ++ H N +++ GC L      LV E+                   P        V
Sbjct: 66  VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAV 120

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP-----------------FTTHVNDNDKLIGTFGF 194
                  +AYLH   S  ++ RD+K                    + +   +  +GT  +
Sbjct: 121 THGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYW 177

Query: 195 IAPECITT---GNCNEKSDVYSFGALLLELLTGK 225
           +APE I     G  + K DV+S G   +EL   K
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERK 211

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 4e-22
 Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 31/159 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLET----EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
                 + H NI++F      T    +  +LV E +  GTL   +      + +   +K 
Sbjct: 59  AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-----RFKVMKIKV 113

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND---KL---------------- 188
                 +I   + +LH   + PI+ RD+K     +       K+                
Sbjct: 114 LRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA 172

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
            IGT  F+APE       +E  DVY+FG  +LE+ T + 
Sbjct: 173 VIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEY 210

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 4e-22
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 33/160 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I   +   H NI+K +          ++ EF A G +   + +       P        V
Sbjct: 60  IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVV 115

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDNDKLIG 190
             +  +A+ YLH      I+ RD+K                       T  +   D  IG
Sbjct: 116 CKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 172

Query: 191 TFGFIAPECITTGNC-----NEKSDVYSFGALLLELLTGK 225
           T  ++APE +          + K+DV+S G  L+E+   +
Sbjct: 173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 212

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 7e-22
 Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
                   +SH+ +++  G C +     ++ E++A G L + + +        F  +  L
Sbjct: 48  EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH----RFQTQQLL 103

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------- 188
           ++  ++  A+ YL     +  + RD+      VND   +                     
Sbjct: 104 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                 +  PE +     + KSD+++FG L+ E+ +  K
Sbjct: 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 1e-21
 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 29/157 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
                ++SH  +++  G CLE     LVFEF+  G L+D +    G        +  L +
Sbjct: 51  AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGM 106

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KLI-------------------- 189
            +++   +AYL       ++ RD+      V +N   K+                     
Sbjct: 107 CLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 163

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
               + +PE  +    + KSDV+SFG L+ E+ +  K
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 88.3 bits (218), Expect = 1e-21
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 36/162 (22%)

Query: 92  IAFASQMSHKNILKFVGCCLETE----VPILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
              A+ ++H  I+              +P +V E+V   TL D +H        P   K 
Sbjct: 58  AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMTPKR 112

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-------------------- 187
            ++V  +   A+ + H      I+ RD+KP    ++  +                     
Sbjct: 113 AIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 169

Query: 188 ----LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
               +IGT  +++PE     + + +SDVYS G +L E+LTG+
Sbjct: 170 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 211

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 1e-21
 Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 31/162 (19%)

Query: 87  YCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK 146
           Y        S++ H   +K      + E       +   G L   I          F   
Sbjct: 54  YVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-----SFDET 108

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------ 188
                  EI +A+ YLH    + I+ RD+KP    +N++  +                  
Sbjct: 109 CTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 165

Query: 189 -----IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                +GT  +++PE +T  +  + SD+++ G ++ +L+ G 
Sbjct: 166 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGL 207

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 89.0 bits (220), Expect = 1e-21
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 29/156 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I+  +Q+ H  ++       +    +L+ EF++ G L DRI   +            +  
Sbjct: 77  ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY----KMSEAEVINY 132

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----KLI------------------ 189
             +    + ++H      IV  DIKP             K+I                  
Sbjct: 133 MRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT 189

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            T  F APE +        +D+++ G L   LL+G 
Sbjct: 190 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 225

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.3 bits (218), Expect = 2e-21
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 44/170 (25%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE---------------- 141
            SH+NI+  +G C  +    L+FE+   G L + +        E                
Sbjct: 98  GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 157

Query: 142 --PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI---------- 189
                 +  L  A ++A  + +L     +  V RD+      V     +           
Sbjct: 158 LNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDI 214

Query: 190 -------------GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                            ++APE +  G    KSDV+S+G LL E+ +   
Sbjct: 215 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGV 264

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (215), Expect = 5e-21
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 29/156 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I+  +   H+NIL         E  +++FEF++   + +RI+            +  +  
Sbjct: 52  ISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF----ELNEREIVSY 107

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND----KLI------------------ 189
             ++  A+ +LH   S  I   DI+P             K+I                  
Sbjct: 108 VHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
               + APE       +  +D++S G L+  LL+G 
Sbjct: 165 TAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGI 200

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.8 bits (214), Expect = 6e-21
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 39/164 (23%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE-------------PFLM 145
           +H NI+  +G C      +++ E+   G L + +     S +                 +
Sbjct: 85  NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------ 187
           +  L  + ++A  +A+L    S+  + RD+      +                       
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 188 -----LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                      ++APE I       +SDV+S+G  L EL +   
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGS 245

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.1 bits (210), Expect = 2e-20
 Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 31/157 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           IA   ++ H NI+             L+ + V+ G L DRI +        +  +   ++
Sbjct: 58  IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-----FYTERDASRL 112

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-----------------------L 188
             ++ +AV YLH      IV RD+KP        D+                        
Sbjct: 113 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 169

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
            GT G++APE +     ++  D +S G +   LL G 
Sbjct: 170 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 206

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 8e-20
 Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 37/162 (22%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRIH-----------DPNGSQLEPFLMKH 147
            HKNI+  +G C +     ++ E+ + G L + +            +P+ +  E    K 
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-------------------- 187
            +  A ++A  + YL    S+  + RD+      V +++                     
Sbjct: 137 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193

Query: 188 ---LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                    ++APE +       +SDV+SFG LL E+ T   
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 235

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 3e-19
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 46/175 (26%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI----LVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           I     + H+NIL F+    +         LV ++   G+L D ++           ++ 
Sbjct: 48  IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEG 101

Query: 148 RLKVAMEIANAVAYLHVGF-----SRPIVFRDIKPFTTHVNDNDKL-------------- 188
            +K+A+  A+ +A+LH+          I  RD+K     V  N                 
Sbjct: 102 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161

Query: 189 -----------IGTFGFIAPECITT------GNCNEKSDVYSFGALLLELLTGKK 226
                      +GT  ++APE +            +++D+Y+ G +  E+     
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 216

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 6e-19
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 34/158 (21%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEP-----------FLMKHR 148
           H NI+  +G C       L  E+   G L D +      + +P              +  
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------- 188
           L  A ++A  + YL     +  + RD+      V +N                       
Sbjct: 130 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 186

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                ++A E +        SDV+S+G LL E+++   
Sbjct: 187 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG 224

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 1e-18
 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 33/161 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETE-VPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
                  SH N+L  +G CL +E  P++V  ++  G L + I +          +K  + 
Sbjct: 79  GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH----NPTVKDLIG 134

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------- 188
             +++A  + +L     +  V RD+      +++   +                      
Sbjct: 135 FGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 191

Query: 189 ---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                   ++A E + T     KSDV+SFG LL EL+T   
Sbjct: 192 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 232

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 1e-18
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
                  ++ H+ +++      E  + I V E+++ G+L D +    G   +   +   +
Sbjct: 61  QEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETG---KYLRLPQLV 116

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------- 188
            +A +IA+ +AY+        V RD++     V +N                        
Sbjct: 117 DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 173

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                 + APE    G    KSDV+SFG LL EL T  +
Sbjct: 174 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 212

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.8 bits (196), Expect = 2e-18
 Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 28/157 (17%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
            A   ++ H N+++ +G C       ++ EF+  G L D + + N  ++        L +
Sbjct: 64  AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA---VVLLYM 120

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------I 189
           A +I++A+ YL     +  + RD+      V +N  +                       
Sbjct: 121 ATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 177

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
               + APE +     + KSDV++FG LL E+ T   
Sbjct: 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 214

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 2e-18
 Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 32/159 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           +     + H+N+++  G  L   +  +V E    G+L DR+    G     FL+    + 
Sbjct: 62  VNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQG----HFLLGTLSRY 116

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------- 188
           A+++A  + YL    S+  + RD+      +   D +                       
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
               F + APE + T   +  SD + FG  L E+ T  +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 5e-18
 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 31/161 (19%)

Query: 90  NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL 149
                  Q SH NI++  G   + +  +++ E++  G L   + + +G     F +   +
Sbjct: 58  GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG----EFSVLQLV 113

Query: 150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--KLI------------------ 189
            +   IA  + YL    +   V RD+      VN N   K+                   
Sbjct: 114 GMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT 170

Query: 190 ----GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                   + APE I+       SDV+SFG ++ E++T  +
Sbjct: 171 SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 211

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 1e-17
 Identities = 35/155 (22%), Positives = 52/155 (33%), Gaps = 29/155 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
              +    H  +          E    V E++  G L   I   +      F +      
Sbjct: 54  RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSRATFY 108

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKP---------------------FTTHVNDNDKLIG 190
           A EI   + +LH   S+ IV+RD+K                              +   G
Sbjct: 109 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCG 165

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  +IAPE +     N   D +SFG LL E+L G+
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 200

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 2e-17
 Identities = 30/163 (18%), Positives = 66/163 (40%), Gaps = 31/163 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDP-----NGSQLEPFLMK 146
            +   + +  ++++ +G   + +  +++ E +  G L   +        N   L P  + 
Sbjct: 74  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 133

Query: 147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------ 188
             +++A EIA+ +AYL+   +   V RD+      V ++  +                  
Sbjct: 134 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 190

Query: 189 -----IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                +    +++PE +  G     SDV+SFG +L E+ T  +
Sbjct: 191 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 233

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 2e-17
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 32/158 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           ++   ++ H N++            IL+ E VA G L D + +      E    +   + 
Sbjct: 64  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-----ESLTEEEATEF 118

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND------------------------K 187
             +I N V YLH   S  I   D+KP    + D +                         
Sbjct: 119 LKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175

Query: 188 LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           + GT  F+APE +       ++D++S G +   LL+G 
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 2e-17
 Identities = 35/157 (22%), Positives = 54/157 (34%), Gaps = 30/157 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
                Q  H +I+K +G   E  V I + E    G L   +            +   +  
Sbjct: 59  ALTMRQFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKY----SLDLASLILY 113

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------I 189
           A +++ A+AYL    S+  V RDI      V+ ND +                       
Sbjct: 114 AYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 170

Query: 190 GTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
               ++APE I        SDV+ FG  + E+L    
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 207

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.2 bits (189), Expect = 2e-17
 Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 45/177 (25%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQL----------- 140
            A  ++  + NI+K +G C   +   L+FE++A G L + +   +   +           
Sbjct: 67  AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTR 126

Query: 141 --------EPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---- 188
                    P     +L +A ++A  +AYL     R  V RD+      V +N  +    
Sbjct: 127 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIAD 183

Query: 189 -------------------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                                   ++ PE I       +SDV+++G +L E+ +   
Sbjct: 184 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 240

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 76.3 bits (187), Expect = 3e-17
 Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 34/153 (22%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA 158
            H NI++            LVF+ +  G L D + +           K   K+   +   
Sbjct: 68  GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEV 122

Query: 159 VAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPE 198
           +  LH      IV RD+KP    ++D+  +                     GT  ++APE
Sbjct: 123 ICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 179

Query: 199 CITTGNC------NEKSDVYSFGALLLELLTGK 225
            I            ++ D++S G ++  LL G 
Sbjct: 180 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.7 bits (188), Expect = 4e-17
 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 33/155 (21%)

Query: 98  MSHKNILKFVGCC----LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAM 153
               +I++ V          +  ++V E +  G L  RI D      + F  +   ++  
Sbjct: 62  SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD---QAFTEREASEIMK 118

Query: 154 EIANAVAYLHVGFSRPIVFRDIKP-----------------------FTTHVNDNDKLIG 190
            I  A+ YLH   S  I  RD+KP                        TT  N       
Sbjct: 119 SIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 175

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  ++APE +     ++  D++S G ++  LL G 
Sbjct: 176 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGY 210

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.3 bits (187), Expect = 4e-17
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 33/161 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
            +   Q  H N++   G   ++   +++ EF+  G+L   +   +G           + +
Sbjct: 78  ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV----IQLVGM 133

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------- 188
              IA  + YL        V RD+      VN N                          
Sbjct: 134 LRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 190

Query: 189 ---IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                   + APE I        SDV+S+G ++ E+++  +
Sbjct: 191 LGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 231

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 76.7 bits (188), Expect = 4e-17
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 28/154 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           ++  S      I+         +    + + +  G L   +          F        
Sbjct: 58  LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----VFSEADMRFY 112

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTF 192
           A EI   + ++H   +R +V+RD+KP    ++++  +                   +GT 
Sbjct: 113 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTH 169

Query: 193 GFIAPECITTG-NCNEKSDVYSFGALLLELLTGK 225
           G++APE +  G   +  +D +S G +L +LL G 
Sbjct: 170 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 203

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.6 bits (185), Expect = 8e-17
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 31/158 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
               + + + ++ + +G CL + V ++  + +  G L D + +   +       ++ L  
Sbjct: 62  AYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGS----QYLLNW 116

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------- 188
            ++IA  + YL     R +V RD+      V     +                       
Sbjct: 117 CVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 173

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                ++A E I       +SDV+S+G  + EL+T   
Sbjct: 174 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 2e-16
 Identities = 27/155 (17%), Positives = 50/155 (32%), Gaps = 32/155 (20%)

Query: 96  SQMSHKNILKFVGCCLETEVP-----ILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
               H N+++    C  +         LVFE V           P          +    
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP----GVPTETIKD 120

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK--------------------LIG 190
           +  ++   + +LH   S  +V RD+KP    V  + +                    ++ 
Sbjct: 121 MMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 177

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T  + APE +   +     D++S G +  E+   K
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 212

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 5e-16
 Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 33/162 (20%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVP------ILVFEFVACGTLADRIHDPNGSQLEPFLM 145
           +    ++ H NI++       +          LV ++V         H     Q     +
Sbjct: 64  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPV 121

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--IGTFGF--------- 194
            +      ++  ++AY+H   S  I  RDIKP    ++ +  +  +  FG          
Sbjct: 122 IYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178

Query: 195 -----------IAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                               +     DV+S G +L ELL G+
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 5e-16
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 29/156 (18%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I+   +++H NI+K +          LVFEF+                     +      
Sbjct: 52  ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALT----GIPLPLIKSY 107

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IG 190
             ++   +A+ H   S  ++ RD+KP    +N    +                     + 
Sbjct: 108 LFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV 164

Query: 191 TFGFIAPECI-TTGNCNEKSDVYSFGALLLELLTGK 225
           T  + APE +      +   D++S G +  E++T +
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 7e-16
 Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 30/156 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    ++SH NI+  +          LVF+F+          +            H    
Sbjct: 51  IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSL-----VLTPSHIKAY 105

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IG 190
            +     + YLH      I+ RD+KP    +++N  L                     + 
Sbjct: 106 MLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVV 162

Query: 191 TFGFIAPECITTGNC-NEKSDVYSFGALLLELLTGK 225
           T  + APE +          D+++ G +L ELL   
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.3 bits (174), Expect = 2e-15
 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 26/153 (16%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
               S ++H  I++  G   + +   ++ +++  G L   +          F        
Sbjct: 55  RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-----RFPNPVAKFY 109

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFG 193
           A E+  A+ YLH   S+ I++RD+KP    ++ N  +                   GT  
Sbjct: 110 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPD 166

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
           +IAPE ++T   N+  D +SFG L+ E+L G  
Sbjct: 167 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 199

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.1 bits (173), Expect = 2e-15
 Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 38/167 (22%)

Query: 95  ASQMSHKNILKFVGCCLETEVPI-LVFEFVACGTLADRIHD-----------PNGSQLEP 142
                H N++  +G C +   P+ ++ EF   G L+  +             P     + 
Sbjct: 71  IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130

Query: 143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------- 188
             ++H +  + ++A  + +L    SR  + RD+      +++ + +              
Sbjct: 131 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 187

Query: 189 ---------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                         ++APE I       +SDV+SFG LL E+ +   
Sbjct: 188 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 234

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.0 bits (173), Expect = 3e-15
 Identities = 25/166 (15%), Positives = 49/166 (29%), Gaps = 40/166 (24%)

Query: 92  IAFASQMSHKNILKFVG-CCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
                 M     +  +  C  E +  ++V E +                   F +K  L 
Sbjct: 53  SKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-----KFSLKTVLL 107

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK----------------------- 187
           +A ++ + + Y+H   S+  + RD+KP    +    K                       
Sbjct: 108 LADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 164

Query: 188 --------LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
                   L GT  + +         + + D+ S G +L+    G 
Sbjct: 165 IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGS 210

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.3 bits (161), Expect = 1e-13
 Identities = 22/147 (14%), Positives = 44/147 (29%), Gaps = 28/147 (19%)

Query: 100 HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAV 159
              +++ +      +  +L+ E               G        +       ++  AV
Sbjct: 68  FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAV 123

Query: 160 AYLHVGFSRPIVFRDIKPFTTHVNDND--------------------KLIGTFGFIAPEC 199
            + H   +  ++ RDIK     ++ N                        GT  +  PE 
Sbjct: 124 RHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEW 180

Query: 200 ITTGN-CNEKSDVYSFGALLLELLTGK 225
           I         + V+S G LL +++ G 
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGD 207

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 65.7 bits (159), Expect = 2e-13
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 30/156 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I+   ++ H NI+K        +  +LVFE +                            
Sbjct: 51  ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-----GLESVTAKSF 105

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF---------------- 194
            +++ N +AY H    R ++ RD+KP    +N   +L I  FG                 
Sbjct: 106 LLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV 162

Query: 195 ----IAPECIT-TGNCNEKSDVYSFGALLLELLTGK 225
                AP+ +  +   +   D++S G +  E++ G 
Sbjct: 163 TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 64.4 bits (156), Expect = 5e-13
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 41/160 (25%)

Query: 99  SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANA 158
               I        E    +LV +    G   + + D  G     F +K     A ++   
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVIDL--LGPSLEDLLDLCG---RKFSVKTVAMAAKQMLAR 113

Query: 159 VAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------------- 187
           V  +H    + +V+RDIKP    +   +                                
Sbjct: 114 VQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREK 170

Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             L GT  +++         + + D+ + G + +  L G 
Sbjct: 171 KNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 210

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 7e-13
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 38/163 (23%)

Query: 92  IAFASQMSHKNILKFVGCC----LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           I    +  H+NI+          +E    + +   +    L   +        +     H
Sbjct: 57  IKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT------QHLSNDH 110

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------- 188
                 +I   + Y+H   S  ++ RD+KP    +N    L                   
Sbjct: 111 ICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTG 167

Query: 189 -----IGTFGFIAPECITTGNC-NEKSDVYSFGALLLELLTGK 225
                + T  + APE +       +  D++S G +L E+L+ +
Sbjct: 168 FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 210

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.3 bits (153), Expect = 2e-12
 Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 26/155 (16%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
            N       ++   ++K      +     +V E+VA G +   +      ++  F   H 
Sbjct: 89  LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR-----RIGRFSEPHA 143

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKP------------------FTTHVNDNDKLIG 190
              A +I     YLH   S  +++RD+KP                            L G
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG 200

Query: 191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           T   +APE I +   N+  D ++ G L+ E+  G 
Sbjct: 201 TPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 6e-12
 Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 29/158 (18%)

Query: 89  FNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR 148
                      H  +          +    V E+   G L   +          F  +  
Sbjct: 53  VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERA 107

Query: 149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------- 188
                EI +A+ YLH   SR +V+RDIK     ++ +  +                    
Sbjct: 108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164

Query: 189 -IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
             GT  ++APE +   +     D +  G ++ E++ G+
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 2e-11
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 35/159 (22%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVP------ILVFEFVACGTLADRIHDPNGSQLEPFLM 145
           +     M H+N++  +      E         LV  F   GT   ++             
Sbjct: 68  LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPF--MGTDLGKLMKHE-----KLGE 120

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------- 188
                +  ++   + Y+H   +  I+ RD+KP    VN++ +L                 
Sbjct: 121 DRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTG 177

Query: 189 -IGTFGFIAPECI-TTGNCNEKSDVYSFGALLLELLTGK 225
            + T  + APE I       +  D++S G ++ E++TGK
Sbjct: 178 YVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 216

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (141), Expect = 6e-11
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 30/157 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV 151
           I    ++ HKNI++        +   LVFEF                  E          
Sbjct: 52  ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPE-----IVKSF 106

Query: 152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-IGTFGF---------------- 194
             ++   + + H    R ++ RD+KP    +N N +L +  FG                 
Sbjct: 107 LFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV 163

Query: 195 -----IAPECITTGNCNEKSDVYSFGALLLELLTGKK 226
                           +   D++S G +  EL    +
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (135), Expect = 4e-10
 Identities = 28/160 (17%), Positives = 54/160 (33%), Gaps = 37/160 (23%)

Query: 92  IAFASQMSHKNILKFVGCCL------ETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM 145
           +     ++HKNI+  +          E +   LV E +          + +         
Sbjct: 67  LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD--------H 118

Query: 146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------ 187
           +    +  ++   + +LH   S  I+ RD+KP    V  +                    
Sbjct: 119 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 175

Query: 188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
              + T  + APE I      E  D++S G ++ E++  K
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.6 bits (135), Expect = 4e-10
 Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 26/152 (17%)

Query: 98  MSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIAN 157
           M   +ILK +          +    V      + +      +     + +  +++ ++  
Sbjct: 77  MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 136

Query: 158 AVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------LIGTFG 193
            + Y+H      I+  DIKP    +   D                          I T  
Sbjct: 137 GLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 194

Query: 194 FIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
           + +PE +        +D++S   L+ EL+TG 
Sbjct: 195 YRSPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 56.0 bits (134), Expect = 5e-10
 Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 35/155 (22%)

Query: 95  ASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 152
            +     NI+       +  +  P LVFE V                             
Sbjct: 84  ENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--------TLTDYDIRFYM 135

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI---------------------GT 191
            EI  A+ Y H   S  I+ RD+KP    ++   + +                      +
Sbjct: 136 YEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS 192

Query: 192 FGFIAPE-CITTGNCNEKSDVYSFGALLLELLTGK 225
             F  PE  +     +   D++S G +L  ++  K
Sbjct: 193 RYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 6e-10
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 33/159 (20%)

Query: 92  IAFASQMSHK-NILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK 150
                 +     ++             L+ +++  G L   +          F       
Sbjct: 79  RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-----RFTEHEVQI 133

Query: 151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLI--------------------- 189
              EI  A+ +LH      I++RDIK     ++ N  ++                     
Sbjct: 134 YVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 190

Query: 190 -GTFGFIAPECITTGN--CNEKSDVYSFGALLLELLTGK 225
            GT  ++AP+ +  G+   ++  D +S G L+ ELLTG 
Sbjct: 191 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 229

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 2e-09
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 42/168 (25%)

Query: 92  IAFASQMSHKNILKFVGCCLETEVPI--------LVFEFVACGTLADRIHDPNGSQLEPF 143
           I     + H+N++  +  C     P         LVF+F          +      L  F
Sbjct: 60  IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-----VLVKF 114

Query: 144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------- 188
            +    +V   + N    L+      I+ RD+K     +  +  L               
Sbjct: 115 TLSEIKRVMQMLLNG---LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 171

Query: 189 ----------IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGK 225
                     + T  +  PE +    +     D++  G ++ E+ T  
Sbjct: 172 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS 219

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.7 bits (120), Expect = 3e-08
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 31/157 (19%)

Query: 92  IAFASQMSHKNILKFVGCCLE----TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH 147
           +     M H+N++  +          E   +       G   + I              H
Sbjct: 68  LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ-----KLTDDH 122

Query: 148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKP-------------------FTTHVNDNDKL 188
              +  +I   + Y+H   S  I+ RD+KP                     T       +
Sbjct: 123 VQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 179

Query: 189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGK 225
              +       +   + N+  D++S G ++ ELLTG+
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 19/101 (18%)

Query: 97  QMSHKNILKFVGCC----LETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA 152
           +   + + K  G         E   ++ E +               +L    +++  +V 
Sbjct: 62  RNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAK------------ELYRVRVENPDEVL 109

Query: 153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKLIGTFG 193
             I   VA  +    R IV  D+  +   V++    I  F 
Sbjct: 110 DMILEEVAKFY---HRGIVHGDLSQYNVLVSEEGIWIIDFP 147

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	227
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.98
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.98
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.97
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.91
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.5
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.11
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.73
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	91.93
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	84.53

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-39  Score=260.48  Aligned_cols=144  Identities=28%  Similarity=0.433  Sum_probs=128.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.+|++++|||||++++++.+++..|+||||+++|+|.+++....     .+++..+..
T Consensus        35 iK~i~~~~~~~~~~~~~--~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~-----~l~e~~~~~  107 (271)
T d1nvra_          35 VKIVDMKRAVDCPENIK--KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQR  107 (271)
T ss_dssp             EEEEECC-------CHH--HHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTT-----BCCHHHHHH
T ss_pred             EEEEehhhcchHHHHHH--HHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCC-----CCCHHHHHH
Confidence            8988654332   4666  99999999999999999999999999999999999999999997654     789999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCC-C
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNC-N  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~-~  206 (227)
                      ++.|++.||+|||   +++|+||||||+||++++++.+                       +||+.|+|||++.+..+ +
T Consensus       108 i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~  184 (271)
T d1nvra_         108 FFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA  184 (271)
T ss_dssp             HHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCH
T ss_pred             HHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCC
Confidence            9999999999999   8999999999999999876543                       58999999999987775 5


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+||++|||+||++|
T Consensus       185 ~~~DiwSlGvilyeml~G~~p  205 (271)
T d1nvra_         185 EPVDVWSCGIVLTAMLAGELP  205 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCS
T ss_pred             CceeeeHhHHHHHHHHhCCCC
Confidence            789999999999999999987

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.8e-39  Score=264.66  Aligned_cols=145  Identities=22%  Similarity=0.395  Sum_probs=127.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   ++|.  +|+.+|++++|||||+++|+|..++..++|||||++|+|.+++....+    .+++.++..
T Consensus        59 vK~~~~~~~~~~~~~~~--~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~----~l~~~~~~~  132 (299)
T d1jpaa_          59 IKTLKSGYTEKQRRDFL--SEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG----QFTVIQLVG  132 (299)
T ss_dssp             EEECCSSCCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTT----CSCHHHHHH
T ss_pred             EEEECcccCHHHHHHHH--HHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccC----CCCHHHHHH
Confidence            6666544333   3566  999999999999999999999999999999999999999998876543    689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------------ecccCccccccccCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------------~g~~~y~aPE~~~~~~  204 (227)
                      ++.|++.||.|||   +++++||||||+|||++.++.+                          .||+.|+|||.+.+..
T Consensus       133 i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  209 (299)
T d1jpaa_         133 MLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK  209 (299)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCC
T ss_pred             HHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCC
Confidence            9999999999999   8999999999999999987643                          3577899999999999


Q ss_pred             CCchhhHHHHHHHHHHHHh-CCCC
Q 040292          205 CNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++.++|||||||++|||+| |++|
T Consensus       210 ~~~~sDvwS~Gvvl~el~t~g~~P  233 (299)
T d1jpaa_         210 FTSASDVWSYGIVMWEVMSYGERP  233 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CCcccccccchHHHHHHHhCCCCC
Confidence            9999999999999999998 7876

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-39  Score=262.11  Aligned_cols=159  Identities=25%  Similarity=0.410  Sum_probs=133.7

Q ss_pred             hcCCCCCC-eeecCCC-eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhh
Q 040292           59 TNNYDPGK-GFLQDHP-ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI  132 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~-vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l  132 (227)
                      .++|+.+. |..++.. ||.++.....    +.|.  +|+.+|++++|||||+++|++.+ +..++||||+++|+|.+++
T Consensus        18 ~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~--~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~~~g~L~~~l   94 (276)
T d1uwha_          18 SGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFK--NEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHL   94 (276)
T ss_dssp             ECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHH--HHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCCEEEHHHHH
T ss_pred             eCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHH--HHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecCCCCCHHHHH
Confidence            45555544 5544444 9998754332    4666  99999999999999999998754 5689999999999999999


Q ss_pred             cCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------e
Q 040292          133 HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------I  189 (227)
Q Consensus       133 ~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~  189 (227)
                      .....    ++++..+..++.|+++||+|||   +++|+||||||+|||++.++.+                       .
T Consensus        95 ~~~~~----~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~  167 (276)
T d1uwha_          95 HIIET----KFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS  167 (276)
T ss_dssp             HTSCC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CC
T ss_pred             hhccC----CCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccc
Confidence            76542    6899999999999999999999   8999999999999999876543                       5


Q ss_pred             cccCccccccccC---CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          190 GTFGFIAPECITT---GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       190 g~~~y~aPE~~~~---~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||+.|+|||++.+   ..++.++|||||||++|||+||+.|
T Consensus       168 gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~P  208 (276)
T d1uwha_         168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP  208 (276)
T ss_dssp             CCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCC
Confidence            8899999999864   3489999999999999999999987

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-39  Score=258.59  Aligned_cols=159  Identities=25%  Similarity=0.479  Sum_probs=135.8

Q ss_pred             hcCCCCCC-eeecCCC---eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhc
Q 040292           59 TNNYDPGK-GFLQDHP---ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH  133 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~---vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~  133 (227)
                      .++|+.+. |.+.+..   ||+++..... ++|.  +|+.++++++|||||+++|+|..++..++||||+++|+|.+++.
T Consensus        15 ~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~--~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~   92 (263)
T d1sm2a_          15 SGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFI--EEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLR   92 (263)
T ss_dssp             CCSSCCEEEEEETTTEEEEEEECCSSSSCHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             eCCCeEEEEEEECCCCEEEEEEECCCcCcHHHHH--HHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhh
Confidence            44555544 5554433   8998765443 5677  99999999999999999999999999999999999999999987


Q ss_pred             CCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecc
Q 040292          134 DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGT  191 (227)
Q Consensus       134 ~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~  191 (227)
                      ....    .+++..+..++.|++.||+|||   +++|+||||||+||++++++.+                      .||
T Consensus        93 ~~~~----~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt  165 (263)
T d1sm2a_          93 TQRG----LFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP  165 (263)
T ss_dssp             TTTT----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC------------------C
T ss_pred             cccc----CCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecC
Confidence            6542    6889999999999999999999   8999999999999999876543                      478


Q ss_pred             cCccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       192 ~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      +.|+|||++.+..++.++|||||||++|||+|+..
T Consensus       166 ~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~  200 (263)
T d1sm2a_         166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK  200 (263)
T ss_dssp             TTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cccCChHHhcCCCCCchhhhcchHHHHHHHHHCCC
Confidence            89999999999999999999999999999999643

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-39  Score=261.24  Aligned_cols=145  Identities=23%  Similarity=0.348  Sum_probs=129.2

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.+|++++|||||++++++.+++..++||||+++|+|.+++.....    ++++..+..+
T Consensus        42 vK~i~~~~~~~~~~~~--~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~----~l~e~~~~~i  115 (288)
T d2jfla1          42 AKVIDTKSEEELEDYM--VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER----PLTESQIQVV  115 (288)
T ss_dssp             EEEEECSSSGGGGGTH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTS----CCCHHHHHHH
T ss_pred             EEEECcCCHHHHHHHH--HHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCC----CCCHHHHHHH
Confidence            8988765444  5666  999999999999999999999999999999999999999998765332    6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCcccccccc-----CCCC
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECIT-----TGNC  205 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~-----~~~~  205 (227)
                      +.|++.||.|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.     ...+
T Consensus       116 ~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y  192 (288)
T d2jfla1         116 CKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY  192 (288)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSST
T ss_pred             HHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCC
Confidence            999999999999   9999999999999999987643                     6899999999984     3457


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||+||++|||+||+.|
T Consensus       193 ~~k~DiwSlGvilyemltg~~P  214 (288)
T d2jfla1         193 DYKADVWSLGITLIEMAEIEPP  214 (288)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ChhhhHHHHHHHHHHHhhCCCC
Confidence            8999999999999999999987

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-39  Score=258.89  Aligned_cols=144  Identities=27%  Similarity=0.449  Sum_probs=130.2

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.++++++|||||++++++.+++..|+||||+++|+|.+++....     ++++..+
T Consensus        36 iK~i~~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~-----~l~e~~~  108 (263)
T d2j4za1          36 LKVLFKAQLEKAGVEHQLR--REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-----KFDEQRT  108 (263)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----SCCHHHH
T ss_pred             EEEEchHHccChHHHHHHH--HHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcC-----CCCHHHH
Confidence            88875322     224566  99999999999999999999999999999999999999999997543     6899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      ..++.|++.||+|||   +++|+||||||+||++++++.+                   .||+.|+|||++.+..++.++
T Consensus       109 ~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~  185 (263)
T d2j4za1         109 ATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV  185 (263)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTH
T ss_pred             HHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchh
Confidence            999999999999999   8999999999999999887643                   699999999999998899999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      |||||||++|||++|+.|
T Consensus       186 DiwSlGvilyell~G~~P  203 (263)
T d2j4za1         186 DLWSLGVLCYEFLVGKPP  203 (263)
T ss_dssp             HHHHHHHHHHHHHHSSCT
T ss_pred             hhhhHhHHHHHHhcCCCC
Confidence            999999999999999987

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=260.28  Aligned_cols=143  Identities=24%  Similarity=0.384  Sum_probs=129.9

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.+|++++|||||++++++..++..|+||||+++|+|.+++...      ++++..+..+
T Consensus        50 vK~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~------~l~~~~~~~i  121 (293)
T d1yhwa1          50 IRQMNLQQQPKKELII--NEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET------CMDEGQIAAV  121 (293)
T ss_dssp             EEEEEGGGCSCHHHHH--HHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHS------CCCHHHHHHH
T ss_pred             EEEEecccChHHHHHH--HHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhcc------CCCHHHHHHH
Confidence            8988654333  4566  9999999999999999999999999999999999999999988642      6889999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCchhh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      +.|++.||+|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++.++|
T Consensus       122 ~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D  198 (293)
T d1yhwa1         122 CRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD  198 (293)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHH
T ss_pred             HHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhc
Confidence            999999999999   9999999999999999877643                     5999999999999989999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|+|+||+.|
T Consensus       199 iwSlGvilyemltG~~P  215 (293)
T d1yhwa1         199 IWSLGIMAIEMIEGEPP  215 (293)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             eehHhHHHHHHhhCCCC
Confidence            99999999999999987

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-39  Score=265.98  Aligned_cols=144  Identities=19%  Similarity=0.342  Sum_probs=130.7

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   +.+.  +|+.+|++++|||||+++++|.+++..|+||||+++|+|.+++...+     .+++..+..
T Consensus        36 iK~i~~~~~~~~~~~~~--~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~-----~l~~~~~~~  108 (322)
T d1s9ja_          36 RKLIHLEIKPAIRNQII--RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-----RIPEQILGK  108 (322)
T ss_dssp             EEEEECCCCTTHHHHHH--HHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHS-----SCCHHHHHH
T ss_pred             EEEEChhhCHHHHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcC-----CCCHHHHHH
Confidence            8888755433   3566  99999999999999999999999999999999999999999997544     689999999


Q ss_pred             HHHHHHHHHHHhhhcCC-CCeEEecCCCCceeecCCCce-------------------ecccCccccccccCCCCCchhh
Q 040292          151 VAMEIANAVAYLHVGFS-RPIVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~-~~i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ++.|++.||+|||   + ++|+||||||+|||+++++.+                   +||+.|+|||++.+..++.++|
T Consensus       109 ~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~D  185 (322)
T d1s9ja_         109 VSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSD  185 (322)
T ss_dssp             HHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHH
T ss_pred             HHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHH
Confidence            9999999999999   6 489999999999999987654                   7999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|||++|+.|
T Consensus       186 iWSlGvil~ell~G~~P  202 (322)
T d1s9ja_         186 IWSMGLSLVEMAVGRYP  202 (322)
T ss_dssp             HHHHHHHHHHHHHSSCC
T ss_pred             HHHHHHHHHHHHHCCCC
Confidence            99999999999999987

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.5e-38  Score=257.74  Aligned_cols=144  Identities=26%  Similarity=0.388  Sum_probs=124.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.+......   +.+.  +|+.+|++++|||||++++++.+++..|+|||||+||+|.+++....     .+++..+..
T Consensus        39 vK~i~~~~~~~~~~~~~--~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~-----~l~e~~~~~  111 (307)
T d1a06a_          39 IKCIAKKALEGKEGSME--NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG-----FYTERDASR  111 (307)
T ss_dssp             EEEEEC----------C--HHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCS-----CCCHHHHHH
T ss_pred             EEEEchHHhhhHHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhccc-----CCCHHHHHH
Confidence            8988754332   4566  99999999999999999999999999999999999999999998654     789999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecC---CCce--------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND---NDKL--------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~---~~~~--------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||+|||   +++|+||||||+||++..   ++.+                    +||+.|+|||++.+..++.
T Consensus       112 ~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~  188 (307)
T d1a06a_         112 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK  188 (307)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCCCT
T ss_pred             HHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCc
Confidence            9999999999999   999999999999999853   2222                    6999999999999989999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|||++|+.|
T Consensus       189 ~~DiwSlGvilyell~g~~P  208 (307)
T d1a06a_         189 AVDCWSIGVIAYILLCGYPP  208 (307)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHhhhhhHHHHHHHhCCCC
Confidence            99999999999999999987

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=258.43  Aligned_cols=143  Identities=24%  Similarity=0.397  Sum_probs=124.4

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    ++|.  +|+.+|++++|||||+++|+|.. +..++||||+++|+|.+++....     ++++..+.
T Consensus        39 vK~~~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~-----~l~~~~~~  110 (277)
T d1xbba_          39 VKILKNEANDPALKDELL--AEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNR-----HVKDKNII  110 (277)
T ss_dssp             EEEEC-----CHHHHHHH--HHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCT-----TCCHHHHH
T ss_pred             EEEEChhhCCHHHHHHHH--HHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHhhcc-----CCCHHHHH
Confidence            8888654333    4566  99999999999999999999864 56789999999999999997654     68999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCC
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~  205 (227)
                      .++.|++.||+|||   +++|+||||||+||+++.++.+                        .||+.|+|||.+.+..+
T Consensus       111 ~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~  187 (277)
T d1xbba_         111 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF  187 (277)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEE
T ss_pred             HHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCC
Confidence            99999999999999   8999999999999999876532                        47889999999998899


Q ss_pred             CchhhHHHHHHHHHHHHh-CCCC
Q 040292          206 NEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      +.++|||||||++|||+| |+.|
T Consensus       188 ~~~sDiwS~Gv~l~ellt~g~~P  210 (277)
T d1xbba_         188 SSKSDVWSFGVLMWEAFSYGQKP  210 (277)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             CchhhhccchhhhhHHhhCCCCC
Confidence            999999999999999998 7877

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-38  Score=257.90  Aligned_cols=144  Identities=22%  Similarity=0.341  Sum_probs=130.2

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.+|++++||||+++++++.+++..|+||||+++|+|.+++...+     ++++..+
T Consensus        38 vK~i~~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~-----~l~e~~~  110 (288)
T d1uu3a_          38 IKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG-----SFDETCT  110 (288)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHS-----SCCHHHH
T ss_pred             EEEEehHHccCHHHHHHHH--HHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccC-----CCCHHHH
Confidence            89886432     224566  99999999999999999999999999999999999999999987654     7899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNC  205 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~  205 (227)
                      ..++.|++.||+|||   +++|+||||||+||++++++.+                       +||+.|+|||++.+..+
T Consensus       111 ~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~  187 (288)
T d1uu3a_         111 RFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA  187 (288)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCC
Confidence            999999999999999   9999999999999999887543                       58999999999999999


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||+||++|||++|+.|
T Consensus       188 ~~~~DiwSlGvilyell~g~~P  209 (288)
T d1uu3a_         188 CKSSDLWALGCIIYQLVAGLPP  209 (288)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CcccceehhhHHHHHHhhCCCC
Confidence            9999999999999999999987

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.4e-38  Score=256.77  Aligned_cols=161  Identities=24%  Similarity=0.392  Sum_probs=137.5

Q ss_pred             hcCCCCCC-eeec--CCC--eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhh
Q 040292           59 TNNYDPGK-GFLQ--DHP--ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI  132 (227)
Q Consensus        59 ~~~f~~~~-~~~~--~~~--vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l  132 (227)
                      .++|+.+. |...  +..  ||.++.+... ++|.  +|+.+|++++|||||+++|+|.+++..++||||+++|+|.+++
T Consensus        27 ~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l  104 (287)
T d1opja_          27 GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL--KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL  104 (287)
T ss_dssp             TTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHH--HHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHH
T ss_pred             eCCCeEEEEEEECCCCeEEEEEEECCccchHHHHH--HHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHh
Confidence            45566655 5553  222  8988765444 5677  9999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ec
Q 040292          133 HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IG  190 (227)
Q Consensus       133 ~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g  190 (227)
                      .....   ..+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+                      .|
T Consensus       105 ~~~~~---~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g  178 (287)
T d1opja_         105 RECNR---QEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF  178 (287)
T ss_dssp             HHSCT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEE
T ss_pred             hhccc---cchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeeccccc
Confidence            64321   26889999999999999999999   8999999999999999876543                      47


Q ss_pred             ccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          191 TFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       191 ~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       179 ~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p  215 (287)
T d1opja_         179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS  215 (287)
T ss_dssp             CGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCC
Confidence            7889999999999999999999999999999997654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-38  Score=257.30  Aligned_cols=160  Identities=21%  Similarity=0.394  Sum_probs=134.3

Q ss_pred             hhcCCCCCC-eeec--C-C-C--eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCC
Q 040292           58 ATNNYDPGK-GFLQ--D-H-P--ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGT  127 (227)
Q Consensus        58 ~~~~f~~~~-~~~~--~-~-~--vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gs  127 (227)
                      +.++|+.+. |...  + . .  ||.++.....   ++|.  +|+.+|++++|||||+++|+|.. +..|+||||+++|+
T Consensus        18 G~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~--~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~   94 (285)
T d1u59a_          18 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMM--REAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP   94 (285)
T ss_dssp             ECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHH--HHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred             ecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHH--HHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence            455566554 4442  1 1 1  8888765443   4566  99999999999999999999864 56899999999999


Q ss_pred             hhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------
Q 040292          128 LADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------  188 (227)
Q Consensus       128 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------  188 (227)
                      |.+++.....    ++++..+..++.|++.||+|||   +++++||||||+||+++.++.+                   
T Consensus        95 L~~~l~~~~~----~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~  167 (285)
T d1u59a_          95 LHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  167 (285)
T ss_dssp             HHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred             HHHHhhcccc----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhcccccccccc
Confidence            9999865442    7899999999999999999999   8999999999999999876533                   


Q ss_pred             -----ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 -----IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 -----~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                           .||+.|+|||++.+..++.++|||||||++|||+| |+.|
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~P  212 (285)
T d1u59a_         168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP  212 (285)
T ss_dssp             CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             cccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCC
Confidence                 47788999999998899999999999999999998 8877

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-38  Score=256.22  Aligned_cols=151  Identities=23%  Similarity=0.340  Sum_probs=119.9

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee--CCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE--TEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.+......    +.+.  +|+.+|++++|||||++++++.+  ++..|+||||+++|+|.+++...... ...+++..
T Consensus        34 vK~i~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~-~~~l~e~~  110 (269)
T d2java1          34 WKELDYGSMTEAEKQMLV--SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE-RQYLDEEF  110 (269)
T ss_dssp             EEEECCTTSCHHHHHHHH--HHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHH-TCCCCHHH
T ss_pred             EEEEChhhCCHHHHHHHH--HHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhcccc-CCCCCHHH
Confidence            8988765443    3455  99999999999999999999965  45678999999999999988642110 12689999


Q ss_pred             HHHHHHHHHHHHHHhhhc--CCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC
Q 040292          148 RLKVAMEIANAVAYLHVG--FSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN  204 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~--~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~  204 (227)
                      +..++.|++.||+|||..  ...+|+||||||+||+++.++.+                     +||+.|+|||++.+..
T Consensus       111 ~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~  190 (269)
T d2java1         111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS  190 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCC
Confidence            999999999999999931  12359999999999999987643                     6899999999999989


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++|||||||++|||+||++|
T Consensus       191 ~~~~~DIwSlGvilyel~tg~~P  213 (269)
T d2java1         191 YNEKSDIWSLGCLLYELCALMPP  213 (269)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CChHHHHHhhCHHHHHHhhCCCC
Confidence            99999999999999999999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.3e-38  Score=258.00  Aligned_cols=144  Identities=24%  Similarity=0.384  Sum_probs=128.0

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+......     +.+.  +|+.+|++++|||||++++++.+++..|+|||||++|+|..++....     ++++..+
T Consensus        45 vK~i~~~~~~~~~~~~~~~--~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~-----~l~e~~~  117 (309)
T d1u5ra_          45 IKKMSYSGKQSNEKWQDII--KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-----PLQEVEI  117 (309)
T ss_dssp             EEEEECCSSCHHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTS-----CCCHHHH
T ss_pred             EEEEchhhccCHHHHHHHH--HHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCC-----CCCHHHH
Confidence            8998765443     3456  99999999999999999999999999999999999999977665443     7899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------ecccCccccccccC---CCCCch
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------IGTFGFIAPECITT---GNCNEK  208 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------~g~~~y~aPE~~~~---~~~~~~  208 (227)
                      ..++.|++.||.|||   +++|+||||||+||+++.++.+                 +||+.|+|||++.+   ..|+.+
T Consensus       118 ~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~  194 (309)
T d1u5ra_         118 AAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK  194 (309)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTH
T ss_pred             HHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccccCHHHHhccCCCCcCch
Confidence            999999999999999   8999999999999999987643                 69999999999864   458999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|||||||++|||++|+.|
T Consensus       195 ~DiwSlGvilyel~~g~~P  213 (309)
T d1u5ra_         195 VDVWSLGITCIELAERKPP  213 (309)
T ss_dssp             HHHHHHHHHHHHHHHSSCT
T ss_pred             hhhhhHHHHHHHHHHCCCC
Confidence            9999999999999999987

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-38  Score=255.55  Aligned_cols=160  Identities=23%  Similarity=0.425  Sum_probs=134.7

Q ss_pred             hcCCCCCC-eeecCCC---eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhc
Q 040292           59 TNNYDPGK-GFLQDHP---ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH  133 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~---vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~  133 (227)
                      .++|+.+. |.++++.   ||+++..... +.|.  +|+.+|++++|||||+++|++.+ +..++||||+++|+|.+++.
T Consensus        23 ~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~--~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~   99 (272)
T d1qpca_          23 AGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL--AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK   99 (272)
T ss_dssp             EETTEEEEEEEETTTEEEEEEEECTTSSCHHHHH--HHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTT
T ss_pred             cCCCcEEEEEEECCCCEEEEEEEccCcCCHHHHH--HHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCCCCcHHHHHh
Confidence            44555544 6665544   9999765444 5677  99999999999999999998854 56799999999999999876


Q ss_pred             CCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecc
Q 040292          134 DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGT  191 (227)
Q Consensus       134 ~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~  191 (227)
                      ....   .++++..+..++.|+++||.|||   +++|+||||||+||++++++.+                      .||
T Consensus       100 ~~~~---~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt  173 (272)
T d1qpca_         100 TPSG---IKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP  173 (272)
T ss_dssp             SHHH---HTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCC
T ss_pred             hcCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCc
Confidence            5321   25899999999999999999999   8999999999999999987543                      477


Q ss_pred             cCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       192 ~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.|+|||++.+..++.++|||||||++|||+||..|
T Consensus       174 ~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~  209 (272)
T d1qpca_         174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI  209 (272)
T ss_dssp             TTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCC
Confidence            889999999988899999999999999999996544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-38  Score=251.93  Aligned_cols=159  Identities=25%  Similarity=0.376  Sum_probs=130.6

Q ss_pred             hhcCCCCCC-eeec--CCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee----CCcceeEeeccc
Q 040292           58 ATNNYDPGK-GFLQ--DHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE----TEVPILVFEFVA  124 (227)
Q Consensus        58 ~~~~f~~~~-~~~~--~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~----~~~~~lV~E~~~  124 (227)
                      ..++|+.+. +...  +..  ||.+......    +.|.  +|+++|++++|||||++++++..    +...++||||++
T Consensus        18 G~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~   95 (270)
T d1t4ha_          18 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFK--EEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMT   95 (270)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHH--HHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCC
T ss_pred             ecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHH--HHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCC
Confidence            445566554 3332  222  7887654332    3566  99999999999999999999875    345789999999


Q ss_pred             CCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEecCCCCceeecC-CCce-------------
Q 040292          125 CGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP--IVFRDIKPFTTHVND-NDKL-------------  188 (227)
Q Consensus       125 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~--i~H~dlkp~nil~~~-~~~~-------------  188 (227)
                      +|+|.+++....     .+++..+..++.|++.||+|||   +++  |+||||||+||++++ ++.+             
T Consensus        96 ~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          96 SGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             CCcHHHHHhccc-----cccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            999999997543     6889999999999999999999   777  999999999999964 4432             


Q ss_pred             ------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                            +||+.|+|||++.+ .++.++||||+||++|||++|+.|
T Consensus       168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~P  211 (270)
T d1t4ha_         168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  211 (270)
T ss_dssp             TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCC
Confidence                  69999999998864 699999999999999999999987

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-37  Score=257.15  Aligned_cols=144  Identities=19%  Similarity=0.320  Sum_probs=130.6

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++...     ..+.+.  +|+.+|++++||||+++++++.+++..|+|||||++|+|.+++....     .+++..+
T Consensus        35 iK~i~k~~~~~~~~~~~~~--~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~-----~~~e~~~  107 (337)
T d1o6la_          35 MKILRKEVIIAKDEVAHTV--TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER-----VFTEERA  107 (337)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----CCCHHHH
T ss_pred             EEEEchhhccCHHHHHHHH--HHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhccc-----CCcHHHH
Confidence            88886432     114455  99999999999999999999999999999999999999999998654     6889999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCCc
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ..++.|++.||+|||   +++|+||||||+||+++.++.+                     +||+.|+|||++.+..++.
T Consensus       108 ~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~  184 (337)
T d1o6la_         108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR  184 (337)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCT
T ss_pred             HHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCCh
Confidence            999999999999999   9999999999999999987643                     6999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+||++|||++|++|
T Consensus       185 ~~DiwSlGvilyeml~G~~p  204 (337)
T d1o6la_         185 AVDWWGLGVVMYEMMCGRLP  204 (337)
T ss_dssp             THHHHHHHHHHHHHHHSSCS
T ss_pred             hhcccchhhHHHHHHHCCCC
Confidence            99999999999999999987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=248.84  Aligned_cols=159  Identities=21%  Similarity=0.415  Sum_probs=137.7

Q ss_pred             cCCCCCC-eeecCCC---eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcC
Q 040292           60 NNYDPGK-GFLQDHP---ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHD  134 (227)
Q Consensus        60 ~~f~~~~-~~~~~~~---vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~  134 (227)
                      +.|+.++ |..+++.   ||.++..... ++|.  +|+.++++++||||++++|+|.+++..++||||+++|+|.+++..
T Consensus        15 G~fg~Vy~~~~~~~~~vAvK~l~~~~~~~~~~~--~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~   92 (258)
T d1k2pa_          15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFI--EEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE   92 (258)
T ss_dssp             ETTEEEEEEEETTTEEEEEEEEESSSSCHHHHH--HHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHS
T ss_pred             CCCeEEEEEEECCCCEEEEEEECcCcCCHHHHH--HHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhc
Confidence            4454444 6665543   8999865544 6777  999999999999999999999999999999999999999999876


Q ss_pred             CCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------eccc
Q 040292          135 PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTF  192 (227)
Q Consensus       135 ~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~  192 (227)
                      ...    .+++..+..++.|+++||+|||   +++|+||||||+||++++++.+                      .||+
T Consensus        93 ~~~----~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~  165 (258)
T d1k2pa_          93 MRH----RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV  165 (258)
T ss_dssp             GGG----CCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCG
T ss_pred             ccc----CCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCC
Confidence            542    6889999999999999999999   8999999999999999986543                      4778


Q ss_pred             CccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          193 GFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       193 ~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .|+|||.+.+..++.++|||||||++|||+| |+.|
T Consensus       166 ~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~P  201 (258)
T d1k2pa_         166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP  201 (258)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             CcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCC
Confidence            8999999999999999999999999999998 7766

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-37  Score=251.74  Aligned_cols=144  Identities=24%  Similarity=0.357  Sum_probs=129.1

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCH
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~  145 (227)
                      ||.+......        +.+.  +|+.+|++++|||||++++++.+++..|+|||||++|+|.+++....     .+++
T Consensus        40 vK~i~~~~~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~-----~l~~  112 (293)
T d1jksa_          40 AKFIKKRRTKSSRRGVSREDIE--REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-----SLTE  112 (293)
T ss_dssp             EEEEEBCSSTTCSSSBCHHHHH--HHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHS-----SCCH
T ss_pred             EEEEEhhhcchhhhhHHHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhcccc-----ccch
Confidence            8988644321        3456  99999999999999999999999999999999999999999997643     6899


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc----e--------------------ecccCcccccccc
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK----L--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~----~--------------------~g~~~y~aPE~~~  201 (227)
                      ..+..++.|++.||+|||   +.+++||||||+||+++.++.    +                    .||+.|+|||++.
T Consensus       113 ~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~  189 (293)
T d1jksa_         113 EEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN  189 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHT
T ss_pred             hHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHc
Confidence            999999999999999999   999999999999999986542    1                    5888999999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++||||+||++|||++|+.|
T Consensus       190 ~~~~~~~~DiwSlGvilyell~g~~P  215 (293)
T d1jksa_         190 YEPLGLEADMWSIGVITYILLSGASP  215 (293)
T ss_dssp             TCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCCCcccchhhhHHHHHHHcCCCC
Confidence            88899999999999999999999987

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.7e-37  Score=252.60  Aligned_cols=144  Identities=26%  Similarity=0.448  Sum_probs=130.1

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.++...     ..+.+.  +|+.+|++++|||||++++++.+++..|+||||++||+|..++....     .+++..+
T Consensus        34 vK~i~~~~~~~~~~~~~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~-----~~~~~~~  106 (316)
T d1fota_          34 MKVLKKEIVVRLKQVEHTN--DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ-----RFPNPVA  106 (316)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTS-----SCCHHHH
T ss_pred             EEEEchHHccCHHHHHHHH--HHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccccc-----cccccHH
Confidence            89886432     224566  99999999999999999999999999999999999999999887654     6788888


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||+|||   +++|+||||||+|||++.++.+                  +||+.|+|||++.+..++.++|
T Consensus       107 ~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~D  183 (316)
T d1fota_         107 KFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSID  183 (316)
T ss_dssp             HHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhh
Confidence            999999999999999   9999999999999999987653                  6999999999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|||+||+.|
T Consensus       184 iwSlGvilyemltG~~P  200 (316)
T d1fota_         184 WWSFGILIYEMLAGYTP  200 (316)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             ccccchhHHHHHhCCCC
Confidence            99999999999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.6e-37  Score=256.57  Aligned_cols=145  Identities=21%  Similarity=0.280  Sum_probs=129.4

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.++.....  +.+.  +|+.+|++++|||||++++++.+++..|+|||||++|+|.+++.....    ++++.++..+
T Consensus        59 iK~i~~~~~~~~~~~~--~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~----~l~e~~~~~i  132 (352)
T d1koba_          59 AKFINTPYPLDKYTVK--NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY----KMSEAEVINY  132 (352)
T ss_dssp             EEEEECCSHHHHHHHH--HHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTC----CBCHHHHHHH
T ss_pred             EEEECCcchhHHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCC----CCCHHHHHHH
Confidence            8988765433  3455  999999999999999999999999999999999999999998876542    6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecC--CCce--------------------ecccCccccccccCCCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVND--NDKL--------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~--~~~~--------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      +.|++.||+|||   +++|+||||||+|||++.  ++.+                    .||+.|+|||++.+..++.++
T Consensus       133 ~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  209 (352)
T d1koba_         133 MRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYT  209 (352)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHH
T ss_pred             HHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCcc
Confidence            999999999999   999999999999999973  3322                    588999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||+||++|||+||+.|
T Consensus       210 DiwSlGvilyelltG~~P  227 (352)
T d1koba_         210 DMWAIGVLGYVLLSGLSP  227 (352)
T ss_dssp             HHHHHHHHHHHHHHSCCS
T ss_pred             chHHHHHHHHHHHhCCCC
Confidence            999999999999999987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.6e-37  Score=250.20  Aligned_cols=144  Identities=26%  Similarity=0.458  Sum_probs=124.7

Q ss_pred             eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCc----ceeEeecccCCChhhhhcCCCCCCCcccC
Q 040292           74 ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEV----PILVFEFVACGTLADRIHDPNGSQLEPFL  144 (227)
Q Consensus        74 vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~----~~lV~E~~~~gsL~~~l~~~~~~~~~~l~  144 (227)
                      ||.++.....     +.|.  +|+.+|++++||||+++++++...+.    .|+||||++|++|.+++...+     +++
T Consensus        37 iK~i~~~~~~~~~~~~~~~--~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~-----~l~  109 (277)
T d1o6ya_          37 VKVLRADLARDPSFYLRFR--REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-----PMT  109 (277)
T ss_dssp             EEEECSTTTTCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC-----SCC
T ss_pred             EEEEchhhccCHHHHHHHH--HHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC-----CCC
Confidence            8998765433     3466  99999999999999999999986543    789999999999999887654     789


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccc
Q 040292          145 MKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECI  200 (227)
Q Consensus       145 ~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~  200 (227)
                      +.++..++.|++.||+|||   +++++||||||+||+++.++..                        +||+.|+|||++
T Consensus       110 ~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~  186 (277)
T d1o6ya_         110 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA  186 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHH
Confidence            9999999999999999999   9999999999999999865432                        589999999999


Q ss_pred             cCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          201 TTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       201 ~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+..++.++||||+||++|||+||+.|
T Consensus       187 ~~~~~~~~~DiwSlGvilyelltG~~P  213 (277)
T d1o6ya_         187 RGDSVDARSDVYSLGCVLYEVLTGEPP  213 (277)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             cCCCCCcceecccchHHHHHHHhCCCC
Confidence            988999999999999999999999987

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=4.9e-37  Score=256.23  Aligned_cols=145  Identities=19%  Similarity=0.306  Sum_probs=129.7

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHH
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKV  151 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i  151 (227)
                      ||.+......  +.+.  +|+.+|++++|||||++++++.+++..|+|||||++|+|.+++....+    ++++..+..+
T Consensus        56 vK~i~~~~~~~~~~~~--~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~----~l~e~~~~~i  129 (350)
T d1koaa2          56 AKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN----KMSEDEAVEY  129 (350)
T ss_dssp             EEEECCCSHHHHHHHH--HHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTS----CBCHHHHHHH
T ss_pred             EEEEcccchhhHHHHH--HHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcC----CCCHHHHHHH
Confidence            8988755433  4566  999999999999999999999999999999999999999999965432    6899999999


Q ss_pred             HHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC--Cce--------------------ecccCccccccccCCCCCchh
Q 040292          152 AMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN--DKL--------------------IGTFGFIAPECITTGNCNEKS  209 (227)
Q Consensus       152 ~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~--~~~--------------------~g~~~y~aPE~~~~~~~~~~~  209 (227)
                      +.|++.||+|||   +++++||||||+||+++.+  +.+                    .||+.|+|||++.+..++.++
T Consensus       130 ~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~  206 (350)
T d1koaa2         130 MRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT  206 (350)
T ss_dssp             HHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHH
T ss_pred             HHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhH
Confidence            999999999999   9999999999999999642  222                    689999999999998999999


Q ss_pred             hHHHHHHHHHHHHhCCCC
Q 040292          210 DVYSFGALLLELLTGKKG  227 (227)
Q Consensus       210 DvwS~G~il~el~tg~~p  227 (227)
                      ||||+||++|||++|+.|
T Consensus       207 DiwSlGvilyell~G~~P  224 (350)
T d1koaa2         207 DMWSVGVLSYILLSGLSP  224 (350)
T ss_dssp             HHHHHHHHHHHHHHSSCS
T ss_pred             hhhhhhHHHHHHHhCCCC
Confidence            999999999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-37  Score=250.43  Aligned_cols=161  Identities=22%  Similarity=0.384  Sum_probs=135.8

Q ss_pred             hcCCCCCC-eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeC-CcceeEeecccCCChhhhhcC
Q 040292           59 TNNYDPGK-GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLET-EVPILVFEFVACGTLADRIHD  134 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~gsL~~~l~~  134 (227)
                      .++|+.+. |..+|..  ||+++.+...++|.  +|++++++++||||++++|+|.++ +..++||||+++|+|.+++..
T Consensus        17 ~G~fg~Vy~~~~~~~~vAvK~i~~~~~~~~~~--~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~   94 (262)
T d1byga_          17 KGEFGDVMLGDYRGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS   94 (262)
T ss_dssp             ECSSCEEEEEEETTEEEEEEECCCCC--HHHH--HTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHH
T ss_pred             cCCCeEEEEEEECCeEEEEEEECcHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHh
Confidence            34555544 6666655  99998776667888  999999999999999999999654 568999999999999999965


Q ss_pred             CCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccc
Q 040292          135 PNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIA  196 (227)
Q Consensus       135 ~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~a  196 (227)
                      ...   .++++..++.++.|++.||+|||   +++++||||||+||+++.++..                  .+++.|+|
T Consensus        95 ~~~---~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~a  168 (262)
T d1byga_          95 RGR---SVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA  168 (262)
T ss_dssp             HHH---HHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTTSC
T ss_pred             cCC---CCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCCCccccccccCCC
Confidence            321   25899999999999999999999   8999999999999999987653                  47788999


Q ss_pred             cccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          197 PECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       197 PE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      ||++.+..++.++|||||||++|||+| |++|
T Consensus       169 PE~l~~~~~t~~sDIwSfG~il~el~t~~~~p  200 (262)
T d1byga_         169 PEALREKKFSTKSDVWSFGILLWEIYSFGRVP  200 (262)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             hHHHhCCCCChHHHHHhHHHHHHHHHHCCCCC
Confidence            999999999999999999999999998 5655

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-37  Score=252.18  Aligned_cols=149  Identities=24%  Similarity=0.446  Sum_probs=126.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||.+......   +.+.  +|+.+|.++ +|||||+++|+|.+.+..++|||||++|+|.+++......           
T Consensus        72 vK~~~~~~~~~~~~~~~--~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~  149 (325)
T d1rjba_          72 VKMLKEKADSSEREALM--SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ  149 (325)
T ss_dssp             EEEECC------CHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC----------
T ss_pred             EEEeccccCHHHHHHHH--HHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccc
Confidence            6777544333   3555  999999998 8999999999999999999999999999999999764321           


Q ss_pred             -------CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------
Q 040292          139 -------QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------  188 (227)
Q Consensus       139 -------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------  188 (227)
                             ....+++..+..++.|++.||+|||   +++|+||||||+||+++.++.+                       
T Consensus       150 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  226 (325)
T d1rjba_         150 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNA  226 (325)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTE
T ss_pred             cccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccc
Confidence                   1125889999999999999999999   8999999999999999876543                       


Q ss_pred             ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      .||+.|+|||++.+..++.++|||||||++|||+| |++|
T Consensus       227 ~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~P  266 (325)
T d1rjba_         227 RLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  266 (325)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             cCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCC
Confidence            47889999999999999999999999999999998 7876

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=250.17  Aligned_cols=145  Identities=21%  Similarity=0.272  Sum_probs=130.1

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.++..... ..+.  +|+.+|++++|||||++++++.+++..|+|||||+||+|.+++.....    ++++.++..++
T Consensus        35 iK~i~~~~~~~~~~~--~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~----~l~e~~~~~i~  108 (321)
T d1tkia_          35 AKFVKVKGTDQVLVK--KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF----ELNEREIVSYV  108 (321)
T ss_dssp             EEEECCCTHHHHHHH--HHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSC----CCCHHHHHHHH
T ss_pred             EEEEcCCcccHHHHH--HHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCC----CCCHHHHHHHH
Confidence            8888765433 3455  999999999999999999999999999999999999999999976542    68999999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC--c--------------------eecccCccccccccCCCCCchhh
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--K--------------------LIGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~--~--------------------~~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      .|++.||+|||   +++|+||||||+||+++.++  .                    ..+|+.|+|||...+..++.++|
T Consensus       109 ~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~D  185 (321)
T d1tkia_         109 HQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD  185 (321)
T ss_dssp             HHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHH
T ss_pred             HHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhh
Confidence            99999999999   99999999999999997543  1                    15889999999999889999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|+|++|+.|
T Consensus       186 iWSlGvily~ll~G~~P  202 (321)
T d1tkia_         186 MWSLGTLVYVLLSGINP  202 (321)
T ss_dssp             HHHHHHHHHHHHHSSCT
T ss_pred             cccHHHHHHHHHhCCCC
Confidence            99999999999999987

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-36  Score=245.42  Aligned_cols=145  Identities=23%  Similarity=0.363  Sum_probs=128.8

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||+++.....   .+|.  +|+.+|++++|||||+++|+|.+.+..++||||+.++++.+++.....    .+++..+..
T Consensus        41 vK~~~~~~~~~~~~~~~--~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~----~~~~~~~~~  114 (283)
T d1mqba_          41 IKTLKAGYTEKQRVDFL--GEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG----EFSVLQLVG  114 (283)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTT----CSCHHHHHH
T ss_pred             EEEECcccChHHHHHHH--HHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccc----cccHHHHHH
Confidence            8888765444   3566  999999999999999999999999999999999999999998865442    789999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccCCCCC
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      ++.|++.||+|||   +++|+||||||+|||++.++.+                        .||+.|+|||++.+..++
T Consensus       115 i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~  191 (283)
T d1mqba_         115 MLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT  191 (283)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCC
T ss_pred             HHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCC
Confidence            9999999999999   8999999999999999987543                        367889999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|||||||++|||++|..|
T Consensus       192 ~~sDI~S~Gvil~el~t~~~~  212 (283)
T d1mqba_         192 SASDVWSFGIVMWEVMTYGER  212 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCC
T ss_pred             CcccccccHHHHHHHHhCCCC
Confidence            999999999999999996544

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=247.44  Aligned_cols=160  Identities=23%  Similarity=0.327  Sum_probs=134.1

Q ss_pred             hcCCCCCC-eeecCCC---eEEEcCCCCc-ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhc
Q 040292           59 TNNYDPGK-GFLQDHP---ISEFGDNLNT-EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIH  133 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~---vK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~  133 (227)
                      .++|+.+. |..++..   ||+++..... +.|.  +|+.++++++|||||+++|+|. ++..++||||+++|+|.+++.
T Consensus        27 ~G~fg~Vy~~~~~~~~~vAiK~l~~~~~~~~~~~--~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~  103 (285)
T d1fmka3          27 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFL--QEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK  103 (285)
T ss_dssp             ECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHH--HHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHS
T ss_pred             eCCCeEEEEEEECCCCEEEEEEECcccCCHHHHH--HHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhh
Confidence            44455544 6665543   8998765544 5687  9999999999999999999985 466899999999999998886


Q ss_pred             CCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecc
Q 040292          134 DPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGT  191 (227)
Q Consensus       134 ~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~  191 (227)
                      ....   +.++|.++..++.|++.||+|||   .++++||||||+||++++++.+                      .||
T Consensus       104 ~~~~---~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt  177 (285)
T d1fmka3         104 GETG---KYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP  177 (285)
T ss_dssp             HHHH---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CC
T ss_pred             hccc---ccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCCceeecccccc
Confidence            4321   25899999999999999999999   8999999999999999876543                      478


Q ss_pred             cCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          192 FGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       192 ~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.|+|||++....++.++|||||||++|||+||..|
T Consensus       178 ~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p  213 (285)
T d1fmka3         178 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  213 (285)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             ccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCC
Confidence            889999999999999999999999999999997654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-36  Score=249.57  Aligned_cols=144  Identities=22%  Similarity=0.323  Sum_probs=130.2

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~  148 (227)
                      ||.+....     ..+.+.  +|+.+|++++|||||++++++...+..++||||+.+|+|.+++....     .+++..+
T Consensus        71 vK~i~~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~-----~l~e~~~  143 (350)
T d1rdqe_          71 MKILDKQKVVKLKQIEHTL--NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG-----RFSEPHA  143 (350)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHC-----CCCHHHH
T ss_pred             EEEEchHHccCHHHHHHHH--HHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhhcC-----CCCHHHH
Confidence            88886322     114556  99999999999999999999999999999999999999999997654     6899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------ecccCccccccccCCCCCchhh
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------IGTFGFIAPECITTGNCNEKSD  210 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------~g~~~y~aPE~~~~~~~~~~~D  210 (227)
                      ..++.|++.||.|||   +++|+||||||+|||++.++.+                  .||+.|+|||++.+..++.++|
T Consensus       144 ~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~D  220 (350)
T d1rdqe_         144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCcccc
Confidence            999999999999999   9999999999999999987654                  6999999999999989999999


Q ss_pred             HHHHHHHHHHHHhCCCC
Q 040292          211 VYSFGALLLELLTGKKG  227 (227)
Q Consensus       211 vwS~G~il~el~tg~~p  227 (227)
                      |||+||++|||+||+.|
T Consensus       221 iwSlGvilyemltG~~P  237 (350)
T d1rdqe_         221 WWALGVLIYEMAAGYPP  237 (350)
T ss_dssp             HHHHHHHHHHHHHSSCS
T ss_pred             ccchhHHHHHHHhCCCC
Confidence            99999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-36  Score=242.33  Aligned_cols=144  Identities=25%  Similarity=0.368  Sum_probs=125.2

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||.++.....   +.|.  +|+.+|++++|||||+++|++. ++..++||||+++|+|.+++.....    ++++..+..
T Consensus        40 ik~~~~~~~~~~~~~~~--~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~----~l~~~~~~~  112 (273)
T d1mp8a_          40 IKTCKNCTSDSVREKFL--QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKY----SLDLASLIL  112 (273)
T ss_dssp             EEECTTTTSHHHHHHHH--HHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTT----TSCHHHHHH
T ss_pred             EEEeccccCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCC----CCCHHHHHH
Confidence            6666544333   4566  9999999999999999999985 5678999999999999998765432    689999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCCCCCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTGNCNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~~~~~~  208 (227)
                      ++.|++.||.|||   +++++||||||+||++++++.+                      .||+.|+|||++.+..++.+
T Consensus       113 ~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~  189 (273)
T d1mp8a_         113 YAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA  189 (273)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-------------------CCGGGCCHHHHHHCCCSHH
T ss_pred             HHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCc
Confidence            9999999999999   9999999999999999876543                      47889999999999999999


Q ss_pred             hhHHHHHHHHHHHHh-CCCC
Q 040292          209 SDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~t-g~~p  227 (227)
                      +|||||||++|||+| |.+|
T Consensus       190 ~DiwSlGvil~e~lt~g~~P  209 (273)
T d1mp8a_         190 SDVWMFGVCMWEILMHGVKP  209 (273)
T ss_dssp             HHHHHHHHHHHHHHTTSCCT
T ss_pred             cccccchHHHHHHHhcCCCC
Confidence            999999999999998 7776

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-36  Score=246.65  Aligned_cols=144  Identities=26%  Similarity=0.373  Sum_probs=127.4

Q ss_pred             eEEEcCCC-----CcccccchhHHHHHh-cCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNL-----NTEEYYCFNCIAFAS-QMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~-----~~~~~~~~~Ei~~l~-~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||.++...     ..+.+.  +|..++. .++|||||++++++.+++..|+||||+++|+|.+++....     .+++.+
T Consensus        32 vK~i~k~~~~~~~~~~~~~--~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~-----~~~e~~  104 (320)
T d1xjda_          32 IKALKKDVVLMDDDVECTM--VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-----KFDLSR  104 (320)
T ss_dssp             EEEEEHHHHHHTTCHHHHH--HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----SCCHHH
T ss_pred             EEEEchhhccChHHHHHHH--HHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccC-----CCCHHH
Confidence            89886432     113444  7777665 6899999999999999999999999999999999997654     688999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCCCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGNCN  206 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~~~  206 (227)
                      +..++.|++.||+|||   +++++||||||+|||+++++.+                     .||+.|+|||++.+..++
T Consensus       105 ~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  181 (320)
T d1xjda_         105 ATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYN  181 (320)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCC
Confidence            9999999999999999   8999999999999999887643                     689999999999999999


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++||||+||++|||+||+.|
T Consensus       182 ~~~DiwSlGvilyemltG~~P  202 (320)
T d1xjda_         182 HSVDWWSFGVLLYEMLIGQSP  202 (320)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             chhhhhhhhHHHHHHHhCCCC
Confidence            999999999999999999987

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=246.49  Aligned_cols=158  Identities=21%  Similarity=0.297  Sum_probs=130.2

Q ss_pred             hcCCCCCC-eee-c-CCC--eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEee----CCcceeEeecccCCCh
Q 040292           59 TNNYDPGK-GFL-Q-DHP--ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLE----TEVPILVFEFVACGTL  128 (227)
Q Consensus        59 ~~~f~~~~-~~~-~-~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~----~~~~~lV~E~~~~gsL  128 (227)
                      .++|+.+. +.- . +..  ||.++.   ...+.  +|+.++.++ +|||||++++++.+    +...|+|||||+||+|
T Consensus        22 ~G~fg~Vy~a~~~~~~~~vAiK~i~~---~~~~~--~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L   96 (335)
T d2ozaa1          22 LGINGKVLQIFNKRTQEKFALKMLQD---CPKAR--REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGEL   96 (335)
T ss_dssp             ECSSCEEEEEEETTTCCEEEEEEEEC---SHHHH--HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEH
T ss_pred             eccCeEEEEEEECCCCCEEEEEEECC---cHHHH--HHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcH
Confidence            45555554 332 2 222  888863   24455  999987655 89999999999865    3568999999999999


Q ss_pred             hhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC---c------------------
Q 040292          129 ADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND---K------------------  187 (227)
Q Consensus       129 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~---~------------------  187 (227)
                      .+++...+.   ..+++.++..++.|++.||+|||   +++|+||||||+||+++++.   .                  
T Consensus        97 ~~~i~~~~~---~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~  170 (335)
T d2ozaa1          97 FSRIQDRGD---QAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL  170 (335)
T ss_dssp             HHHHHSCSC---CCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCC
T ss_pred             HHHHHhcCC---CCcCHHHHHHHHHHHHHHHHHHH---HcCCccccccccccccccccccccccccccceeeeccCCCcc
Confidence            999976432   26899999999999999999999   99999999999999998632   1                  


Q ss_pred             --eecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          188 --LIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       188 --~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        .+||+.|+|||++.+..++.++||||+||++|+|+||+.|
T Consensus       171 ~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~P  212 (335)
T d2ozaa1         171 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP  212 (335)
T ss_dssp             CCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCS
T ss_pred             ccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCC
Confidence              1699999999999988899999999999999999999987

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=242.46  Aligned_cols=144  Identities=22%  Similarity=0.248  Sum_probs=122.3

Q ss_pred             eEEEcCCCCc-------ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT-------EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~-------~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||+++.....       +.+.  +|+.+|++++|||||++++++..++..|+||||+.++++..+.....     .+++.
T Consensus        28 vK~i~~~~~~~~~~~~~~~~~--~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~-----~l~~~  100 (299)
T d1ua2a_          28 IKKIKLGHRSEAKDGINRTAL--REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSL-----VLTPS  100 (299)
T ss_dssp             EEEC------------CTHHH--HHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCS-----SCCSS
T ss_pred             EEEEehhhhhhhhHHHHHHHH--HHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhccc-----CCCHH
Confidence            8887644322       2455  99999999999999999999999999999999999877776655433     68888


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-C
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-N  204 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~  204 (227)
                      .+..++.|++.||+|||   +++++||||||+||+++.++.+                     +||+.|+|||++... .
T Consensus       101 ~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  177 (299)
T d1ua2a_         101 HIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARM  177 (299)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSC
T ss_pred             HHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCcccccceecChhhccHHHHccCCC
Confidence            99999999999999999   9999999999999999886543                     589999999998755 5


Q ss_pred             CCchhhHHHHHHHHHHHHhCCCC
Q 040292          205 CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       205 ~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++.++||||+||++|||+||++|
T Consensus       178 ~~~~~DiwSlGvil~el~~g~~p  200 (299)
T d1ua2a_         178 YGVGVDMWAVGCILAELLLRVPF  200 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CChhhhhhhcchHHHHHHhCcCC
Confidence            79999999999999999999876

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-35  Score=239.80  Aligned_cols=159  Identities=22%  Similarity=0.432  Sum_probs=126.3

Q ss_pred             hcCCCCCC-eeecCC--C-----eEEEcCCCCc-----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccC
Q 040292           59 TNNYDPGK-GFLQDH--P-----ISEFGDNLNT-----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVAC  125 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~--~-----vK~~~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~  125 (227)
                      .++|+.++ |...+.  .     ||+++.....     ++|.  +|+.+|++++|||||+++|+|.+ +..++||||+++
T Consensus        18 ~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~--~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~   94 (273)
T d1u46a_          18 DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFI--REVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPL   94 (273)
T ss_dssp             ----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHH--HHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTT
T ss_pred             cCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHH--HHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecC
Confidence            34566554 554221  1     6777654322     4667  99999999999999999999965 567899999999


Q ss_pred             CChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------
Q 040292          126 GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------  188 (227)
Q Consensus       126 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------  188 (227)
                      |++.+++.....    ++++..+..++.|++.||.|||   +++|+||||||+||+++.++.+                 
T Consensus        95 ~~l~~~~~~~~~----~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~  167 (273)
T d1u46a_          95 GSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH  167 (273)
T ss_dssp             CBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred             cchhhhhhcccC----CCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhcccCCCc
Confidence            999998865432    7899999999999999999999   8999999999999999876532                 


Q ss_pred             -------ecccCccccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          189 -------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       189 -------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                             .|+..|+|||.+.+..++.++|||||||++|||+| |+.|
T Consensus       168 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~P  214 (273)
T d1u46a_         168 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP  214 (273)
T ss_dssp             EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCC
Confidence                   46778999999999889999999999999999998 7876

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-35  Score=240.80  Aligned_cols=161  Identities=23%  Similarity=0.396  Sum_probs=134.1

Q ss_pred             hhcCCCCCC-eeecC---C---C-eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeC-CcceeEeecccC
Q 040292           58 ATNNYDPGK-GFLQD---H---P-ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLET-EVPILVFEFVAC  125 (227)
Q Consensus        58 ~~~~f~~~~-~~~~~---~---~-vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-~~~~lV~E~~~~  125 (227)
                      ..+.|+.+. |.+..   .   . ||+++.....   ++|.  +|+++|++++|||||+++|+|.+. +..++|||||++
T Consensus        36 G~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~--~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~  113 (311)
T d1r0pa_          36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFL--TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH  113 (311)
T ss_dssp             EEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHH--HHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTT
T ss_pred             eecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHH--HHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeec
Confidence            345565544 55522   1   1 8888754333   4577  999999999999999999998764 578999999999


Q ss_pred             CChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------
Q 040292          126 GTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------  188 (227)
Q Consensus       126 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------  188 (227)
                      |+|.+++.....    .+++..+..++.|++.||.|||   +++|+||||||+|||+++++.+                 
T Consensus       114 g~l~~~~~~~~~----~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         114 GDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             CBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             Cchhhhhccccc----cchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            999999986543    6778889999999999999999   8999999999999999876532                 


Q ss_pred             --------ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 --------IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 --------~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                              .||+.|+|||.+....++.++||||||+++|||+||..|
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p  233 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP  233 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCC
Confidence                    477889999999999999999999999999999997665

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-35  Score=241.50  Aligned_cols=144  Identities=23%  Similarity=0.389  Sum_probs=123.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||+++.....   ++|.  +|+.++++++|||||+++|+|.++ ..++++||+.+|+|.+++.....    .+++..+..
T Consensus        43 vK~~~~~~~~~~~~~~~--~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~~~~----~~~~~~~~~  115 (317)
T d1xkka_          43 IKELREATSPKANKEIL--DEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKD----NIGSQYLLN  115 (317)
T ss_dssp             EEEECC----CTHHHHH--HHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHTSS----SCCHHHHHH
T ss_pred             EEEeccccCHHHHHHHH--HHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCCccccccccccc----CCCHHHHHH
Confidence            7777654332   4677  999999999999999999999764 56788999999999998876542    789999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccCCCCCc
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITTGNCNE  207 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~~~~~~  207 (227)
                      ++.|++.||+|||   +++|+||||||+||+++.++.+                       .||+.|+|||++.+..++.
T Consensus       116 i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~  192 (317)
T d1xkka_         116 WCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTH  192 (317)
T ss_dssp             HHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCCh
Confidence            9999999999999   8999999999999999876543                       4788999999999999999


Q ss_pred             hhhHHHHHHHHHHHHh-CCCC
Q 040292          208 KSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~t-g~~p  227 (227)
                      ++|||||||++|||+| |++|
T Consensus       193 ~sDvwS~Gvil~el~t~g~~p  213 (317)
T d1xkka_         193 QSDVWSYGVTVWELMTFGSKP  213 (317)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCT
T ss_pred             hhhhhhHHHHHHHHHHCCCCC
Confidence            9999999999999999 6665

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.9e-35  Score=244.01  Aligned_cols=130  Identities=22%  Similarity=0.402  Sum_probs=118.9

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+.+++.++|||||++++++..++..|+||||+++|+|.+++....     .+++..+..++.|++.||.|||   +++
T Consensus        56 ~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~-----~~~e~~~~~~~~qi~~aL~ylH---~~~  127 (364)
T d1omwa3          56 IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMH---NRF  127 (364)
T ss_dssp             HHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred             HHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcc-----cccHHHHHHHHHHHHHHHHHHH---HCC
Confidence            44778888899999999999999999999999999999999997644     6889999999999999999999   999


Q ss_pred             eEEecCCCCceeecCCCce-------------------ecccCccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          170 IVFRDIKPFTTHVNDNDKL-------------------IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~-------------------~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||||+|||++.++.+                   +||+.|+|||++..+ .++.++||||+||++|||+||+.|
T Consensus       128 iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~P  205 (364)
T d1omwa3         128 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP  205 (364)
T ss_dssp             EECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccceeeccceeEEcCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCC
Confidence            9999999999999887643                   699999999999754 589999999999999999999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-35  Score=241.11  Aligned_cols=162  Identities=21%  Similarity=0.312  Sum_probs=129.0

Q ss_pred             hcCCCCCC-eeecCCC--eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC----cceeEeecccCCChhhh
Q 040292           59 TNNYDPGK-GFLQDHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE----VPILVFEFVACGTLADR  131 (227)
Q Consensus        59 ~~~f~~~~-~~~~~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV~E~~~~gsL~~~  131 (227)
                      .++|+.++ |.++|..  ||+++.... +++...+|+..+.+++|||||+++|+|.+.+    ..++||||+++|+|.++
T Consensus        13 ~G~fg~Vy~~~~~g~~vAvK~~~~~~~-~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~   91 (303)
T d1vjya_          13 KGRFGEVWRGKWRGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY   91 (303)
T ss_dssp             CCSSSEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH
T ss_pred             eCCCeEEEEEEECCEEEEEEEECccch-hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHH
Confidence            34444443 6666655  898865433 3333125666677889999999999998754    47899999999999999


Q ss_pred             hcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEecCCCCceeecCCCce------------------
Q 040292          132 IHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVG-----FSRPIVFRDIKPFTTHVNDNDKL------------------  188 (227)
Q Consensus       132 l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-----~~~~i~H~dlkp~nil~~~~~~~------------------  188 (227)
                      ++..      +++|..+..++.|++.||.|||..     .+++|+||||||+||+++.++.+                  
T Consensus        92 l~~~------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~  165 (303)
T d1vjya_          92 LNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI  165 (303)
T ss_dssp             HHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred             HhcC------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcce
Confidence            9753      588999999999999999999942     13699999999999999887543                  


Q ss_pred             -------ecccCccccccccCCC------CCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 -------IGTFGFIAPECITTGN------CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 -------~g~~~y~aPE~~~~~~------~~~~~DvwS~G~il~el~tg~~p  227 (227)
                             .||+.|+|||++.+..      ++.++|||||||++|||+||..|
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~  217 (303)
T d1vjya_         166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI  217 (303)
T ss_dssp             CC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCB
T ss_pred             eccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCC
Confidence                   5899999999987643      56789999999999999999754

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.5e-34  Score=233.94  Aligned_cols=144  Identities=24%  Similarity=0.367  Sum_probs=127.0

Q ss_pred             eEEEcCCCCc-----------ccccchhHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT-----------EEYYCFNCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~-----------~~~~~~~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.+......           +.+.  +|+.++++++ ||||+++++++.+++..|+||||+++|+|.+++....     
T Consensus        33 vK~i~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-----  105 (277)
T d1phka_          33 VKIIDVTGGGSFSAEEVQELREATL--KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV-----  105 (277)
T ss_dssp             EEEEETTCSTTCCHHHHHHHHHHHH--HHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS-----
T ss_pred             EEEEecccccchhHHHHHHHHHHHH--HHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcC-----
Confidence            8888765432           1344  9999999996 9999999999999999999999999999999997644     


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~  201 (227)
                      ++++..+..++.|++.||+|||   +++|+||||||+||+++.++.+                    +||+.|+|||.+.
T Consensus       106 ~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~  182 (277)
T d1phka_         106 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIE  182 (277)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhh
Confidence            7899999999999999999999   9999999999999999877543                    5889999999885


Q ss_pred             C------CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 T------GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~------~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +      ..++.++||||+||++|||++|+.|
T Consensus       183 ~~~~~~~~~~~~~~DiwslGvilyeml~g~~P  214 (277)
T d1phka_         183 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP  214 (277)
T ss_dssp             HHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccccCCCCCchheEcccchhhhhhccCCCC
Confidence            3      3468899999999999999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-34  Score=237.29  Aligned_cols=148  Identities=21%  Similarity=0.363  Sum_probs=126.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----------C
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----------S  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----------~  138 (227)
                      ||+++.....   ++|.  +|+.+|+++ +|||||+++|+|.+++..++||||+++|+|.+++.....           .
T Consensus        42 iK~~~~~~~~~~~~~~~--~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~  119 (309)
T d1fvra_          42 IKRMKEYASKDDHRDFA--GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS  119 (309)
T ss_dssp             EEEEECC------CHHH--HHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTT
T ss_pred             EEEECcccChHHHHHHH--HHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhcccc
Confidence            7777543322   4667  999999999 799999999999999999999999999999999975421           1


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPE  198 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE  198 (227)
                      ....+++..+..++.|++.||.|||   +++++||||||+||+++.++.+                    .||..|+|||
T Consensus       120 ~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE  196 (309)
T d1fvra_         120 TASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIE  196 (309)
T ss_dssp             BSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC----CCTTTCCHH
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCceEEccccccccccccccccceecCCcccchH
Confidence            1236899999999999999999999   9999999999999998875432                    5888999999


Q ss_pred             cccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          199 CITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       199 ~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      .+....++.++|||||||++|||++|..
T Consensus       197 ~l~~~~~~~~sDvwSfGvil~ell~~~~  224 (309)
T d1fvra_         197 SLNYSVYTTNSDVWSYGVLLWEIVSLGG  224 (309)
T ss_dssp             HHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             HhccCCCCccceeehhHHHHHHHHhcCC
Confidence            9999999999999999999999999764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=235.63  Aligned_cols=149  Identities=22%  Similarity=0.419  Sum_probs=129.0

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||+++.+...   .++.  +|+..+.++ +|||||+++++|.+++..++||||+++|+|.+++......           
T Consensus        50 vK~~~~~~~~~~~~~~~--~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~  127 (299)
T d1fgka_          50 VKMLKSDATEKDLSDLI--SEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN  127 (299)
T ss_dssp             EECCCTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC-----------
T ss_pred             EEEECcccChHHHHHHH--HHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccC
Confidence            7888765543   3555  899999888 8999999999999999999999999999999999755321           


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCcc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFI  195 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~  195 (227)
                      ..+.+++..+..++.|++.||+|||   +++++||||||+||+++.++..                       .|++.|+
T Consensus       128 ~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~  204 (299)
T d1fgka_         128 PEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWM  204 (299)
T ss_dssp             -CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGS
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhh
Confidence            1235899999999999999999999   9999999999999999877532                       5788999


Q ss_pred             ccccccCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 040292          196 APECITTGNCNEKSDVYSFGALLLELLT-GKKG  227 (227)
Q Consensus       196 aPE~~~~~~~~~~~DvwS~G~il~el~t-g~~p  227 (227)
                      |||.+.+..++.++|||||||++|||++ |.+|
T Consensus       205 aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p  237 (299)
T d1fgka_         205 APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP  237 (299)
T ss_dssp             CHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred             hhhHhcCCCCCchhhhHHhHHHHHHhccCCCCC
Confidence            9999999999999999999999999998 5655

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-34  Score=233.49  Aligned_cols=144  Identities=20%  Similarity=0.331  Sum_probs=121.0

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhh-cCCCCCCCcccCHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRI-HDPNGSQLEPFLMKHR  148 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l-~~~~~~~~~~l~~~~~  148 (227)
                      ||.++.....    +.+.  +|+.+|++++|||||++++++.+++..|+||||+.+ ++.+++ ....    ..+++..+
T Consensus        32 vK~i~~~~~~~~~~~~~~--~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~-~~~~~~~~~~~----~~l~e~~~  104 (298)
T d1gz8a_          32 LKKIRLDTETEGVPSTAI--REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASAL----TGIPLPLI  104 (298)
T ss_dssp             EEEEC-------CCHHHH--HHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTT----TCCCHHHH
T ss_pred             EEEEehhhcChHHHHHHH--HHHHHHHhCCCCcEEEeccccccccceeEEEeecCC-chhhhhhhhcc----cCCCHHHH
Confidence            8988654332    3455  999999999999999999999999999999999975 444444 3322    26899999


Q ss_pred             HHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CC
Q 040292          149 LKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CN  206 (227)
Q Consensus       149 ~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~  206 (227)
                      ..++.|++.||+|||   +++|+||||||+||+++.++..                     .||+.|+|||.+.... ++
T Consensus       105 ~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~  181 (298)
T d1gz8a_         105 KSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS  181 (298)
T ss_dssp             HHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCC
Confidence            999999999999999   9999999999999999876543                     6899999999887665 57


Q ss_pred             chhhHHHHHHHHHHHHhCCCC
Q 040292          207 EKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       207 ~~~DvwS~G~il~el~tg~~p  227 (227)
                      .++|+||+||++|+|++|+.|
T Consensus       182 ~~~DiwSlGvily~m~~G~~P  202 (298)
T d1gz8a_         182 TAVDIWSLGCIFAEMVTRRAL  202 (298)
T ss_dssp             THHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccccccchhhhHHhhCCCC
Confidence            899999999999999999987

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.4e-34  Score=233.77  Aligned_cols=148  Identities=23%  Similarity=0.417  Sum_probs=128.3

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-------------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-------------  137 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-------------  137 (227)
                      ||+++.....   ++|.  +|+.+|++++||||++++++|...+..++||||+++|+|.+++.....             
T Consensus        48 vK~i~~~~~~~~~~~~~--~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  125 (301)
T d1lufa_          48 VKMLKEEASADMQADFQ--REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLST  125 (301)
T ss_dssp             EEECCTTCCHHHHHHHH--HHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC-------------
T ss_pred             EEEEChhcChHHHHHHH--HHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccch
Confidence            8888765443   4577  999999999999999999999999999999999999999999864221             


Q ss_pred             ------CCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------
Q 040292          138 ------SQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------  188 (227)
Q Consensus       138 ------~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------  188 (227)
                            .....+++..+..++.|++.||+|||   +++++||||||+||+++.++.+                       
T Consensus       126 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~  202 (301)
T d1lufa_         126 RARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGND  202 (301)
T ss_dssp             ---------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----C
T ss_pred             hhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCC
Confidence                  11125889999999999999999999   9999999999999999876533                       


Q ss_pred             ecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          189 IGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       189 ~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      .|++.|+|||.+.+..++.++|||||||++|||++|..
T Consensus       203 ~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~  240 (301)
T d1lufa_         203 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL  240 (301)
T ss_dssp             CBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             CcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCC
Confidence            47788999999999999999999999999999999963

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-34  Score=234.13  Aligned_cols=148  Identities=20%  Similarity=0.328  Sum_probs=127.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCC-----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGS-----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-----------  138 (227)
                      ||+++.....   .+|.  +|+.+++++ +|||||+++|+|.+++..++|||||++|+|.+++......           
T Consensus        58 vK~i~~~~~~~~~~~~~--~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~  135 (311)
T d1t46a_          58 VKMLKPSAHLTEREALM--SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM  135 (311)
T ss_dssp             EEEECTTCCHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC----------
T ss_pred             EEEECcccCHHHHHHHH--HHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccc
Confidence            9998765544   3455  999999999 7999999999999999999999999999999998643210           


Q ss_pred             --CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccC
Q 040292          139 --QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFG  193 (227)
Q Consensus       139 --~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~  193 (227)
                        ....+++..+..++.|++.||+|||   +++++||||||+||+++.++..                       .||+.
T Consensus       136 ~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~  212 (311)
T d1t46a_         136 EDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVK  212 (311)
T ss_dssp             ----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGG
T ss_pred             cccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChH
Confidence              1125889999999999999999999   9999999999999999875432                       68899


Q ss_pred             ccccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          194 FIAPECITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       194 y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      |+|||.+.+..++.++|||||||++|||+|+..
T Consensus       213 y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~  245 (311)
T d1t46a_         213 WMAPESIFNCVYTFESDVWSYGIFLWELFSLGS  245 (311)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             HcCHHHhcCCCCCCcccccchHHHHHHHHhCCC
Confidence            999999999999999999999999999999543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.8e-33  Score=228.37  Aligned_cols=144  Identities=20%  Similarity=0.303  Sum_probs=125.5

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||.++.....    +.+.  +|+.+|++++|||||++++++..++..++++|++.++.+..+.....     .+++..+.
T Consensus        31 vK~i~~~~~~~~~~~~~~--~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~-----~l~~~~~~  103 (286)
T d1ob3a_          31 LKKIRLEKEDEGIPSTTI--REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-----GLESVTAK  103 (286)
T ss_dssp             EEEECCSSGGGCCCHHHH--HHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTT-----CCCHHHHH
T ss_pred             EEEEehhhcChHHHHHHH--HHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcC-----CcchhhhH
Confidence            9998765433    3555  99999999999999999999999999999999998766666655443     78999999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCC-CCCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTG-NCNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~-~~~~  207 (227)
                      .++.|++.||+|||   +.+|+||||||+||+++.++.+                     .+++.|+|||.+... .++.
T Consensus       104 ~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~  180 (286)
T d1ob3a_         104 SFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST  180 (286)
T ss_dssp             HHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCT
T ss_pred             HHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCc
Confidence            99999999999999   8999999999999999887643                     588889999998765 4689


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++|+||+||++|||++|+.|
T Consensus       181 ~~DiwslGv~l~el~~G~~p  200 (286)
T d1ob3a_         181 TIDIWSVGCIFAEMVNGTPL  200 (286)
T ss_dssp             HHHHHHHHHHHHHHHHSSCS
T ss_pred             ceeehhcCcHHHHHHHCCCC
Confidence            99999999999999999987

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=230.80  Aligned_cols=145  Identities=19%  Similarity=0.309  Sum_probs=120.7

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcC---CCcccceeEEEEee-----CCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQM---SHKNILKFVGCCLE-----TEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l---~H~niv~l~g~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||.++.....    ..+.  +|+.+|+.+   +||||++++++|..     ....+++|||+.++++........    .
T Consensus        38 iK~i~~~~~~~~~~~~~~--~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~----~  111 (305)
T d1blxa_          38 LKRVRVQTGEEGMPLSTI--REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE----P  111 (305)
T ss_dssp             EEEEEEEBCTTSCBCTHH--HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCT----T
T ss_pred             EEEEehhhccchHHHHHH--HHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccC----C
Confidence            7887644322    2344  888877666   89999999999864     235789999999877655544333    2


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCcccccccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECIT  201 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~  201 (227)
                      .+++..+..++.|++.||+|||   +++|+||||||+|||++.++..                    .||+.|+|||++.
T Consensus       112 ~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~  188 (305)
T d1blxa_         112 GVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL  188 (305)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhc
Confidence            6889999999999999999999   9999999999999999876543                    6899999999999


Q ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          202 TGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       202 ~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +..++.++||||+||++|||++|++|
T Consensus       189 ~~~y~~~~DiwSlG~il~ell~g~~p  214 (305)
T d1blxa_         189 QSSYATPVDLWSVGCIFAEMFRRKPL  214 (305)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCChhehhhchHHHHHHHHHCCCC
Confidence            99999999999999999999999987

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.3e-33  Score=228.00  Aligned_cols=144  Identities=19%  Similarity=0.239  Sum_probs=123.6

Q ss_pred             eEEEcCCCCc--------ccccchhHHHHHhcCC--CcccceeEEEEeeCCcceeEeecccC-CChhhhhcCCCCCCCcc
Q 040292           74 ISEFGDNLNT--------EEYYCFNCIAFASQMS--HKNILKFVGCCLETEVPILVFEFVAC-GTLADRIHDPNGSQLEP  142 (227)
Q Consensus        74 vK~~~~~~~~--------~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~lV~E~~~~-gsL~~~l~~~~~~~~~~  142 (227)
                      ||.+......        ..+.  +|+.+|++++  |||||++++++.+++..++||||+.+ +++.+++....     .
T Consensus        34 vK~i~~~~~~~~~~~~~~~~~~--~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~-----~  106 (273)
T d1xwsa_          34 IKHVEKDRISDWGELPNGTRVP--MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG-----A  106 (273)
T ss_dssp             EEEEEGGGCCCEEECTTCCEEE--HHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC-----S
T ss_pred             EEEEehHHccchhhhhHHHHHH--HHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccC-----C
Confidence            8988654221        3355  9999999996  89999999999999999999999976 57778776543     6


Q ss_pred             cCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCC-Cce-------------------ecccCccccccccC
Q 040292          143 FLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-DKL-------------------IGTFGFIAPECITT  202 (227)
Q Consensus       143 l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~-~~~-------------------~g~~~y~aPE~~~~  202 (227)
                      +++..+..++.|++.||+|||   +++|+||||||+||+++.+ +.+                   .||+.|+|||++.+
T Consensus       107 l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~  183 (273)
T d1xwsa_         107 LQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY  183 (273)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccccceecccccccccccCCCcCCHHHHcC
Confidence            899999999999999999999   9999999999999999854 322                   58999999999987


Q ss_pred             CCC-CchhhHHHHHHHHHHHHhCCCC
Q 040292          203 GNC-NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 ~~~-~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ..+ +.++||||+||++|||+||+.|
T Consensus       184 ~~~~~~~~DiwSlGvilyell~g~~P  209 (273)
T d1xwsa_         184 HRYHGRSAAVWSLGILLYDMVCGDIP  209 (273)
T ss_dssp             SCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCCcccccccceeeehhHhhCCCC
Confidence            765 5678999999999999999987

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.4e-33  Score=230.54  Aligned_cols=148  Identities=19%  Similarity=0.380  Sum_probs=121.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcC-CCcccceeEEEEeeCC-cceeEeecccCCChhhhhcCCCCC----------
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQM-SHKNILKFVGCCLETE-VPILVFEFVACGTLADRIHDPNGS----------  138 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~----------  138 (227)
                      ||+++.....   +.+.  +|+..+.++ +|+||+.+++++...+ ..++|||||++|+|.+++......          
T Consensus        48 vK~l~~~~~~~~~~~~~--~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~  125 (299)
T d1ywna1          48 VKMLKEGATHSEHRALM--SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  125 (299)
T ss_dssp             EEEC----CHHHHHHHH--HHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-------
T ss_pred             EEEEccccCcHHHHHHH--HHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhh
Confidence            7888755443   3455  888888777 7899999999987654 688999999999999998643210          


Q ss_pred             -CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCc
Q 040292          139 -QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGF  194 (227)
Q Consensus       139 -~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y  194 (227)
                       ....+++..+..++.|++.||+|||   +++|+||||||+||+++.++.+                       .||+.|
T Consensus       126 ~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y  202 (299)
T d1ywna1         126 LYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  202 (299)
T ss_dssp             ----CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGG
T ss_pred             hhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccc
Confidence             1125889999999999999999999   8999999999999999875432                       588999


Q ss_pred             cccccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 040292          195 IAPECITTGNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       195 ~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      +|||.+.+..++.++|||||||++|||+||..
T Consensus       203 ~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~  234 (299)
T d1ywna1         203 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA  234 (299)
T ss_dssp             CCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             cchhHhhcCCCCcccceeehHHHHHHHHhCCC
Confidence            99999999999999999999999999999754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.8e-33  Score=228.26  Aligned_cols=148  Identities=22%  Similarity=0.400  Sum_probs=128.1

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCC-----CCCcccCH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNG-----SQLEPFLM  145 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~-----~~~~~l~~  145 (227)
                      ||+++.....   ..|.  +|+.++++++||||++++|+|..++..++||||+++|+|.+++.....     .....+++
T Consensus        55 vK~~~~~~~~~~~~~~~--~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  132 (308)
T d1p4oa_          55 IKTVNEAASMRERIEFL--NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL  132 (308)
T ss_dssp             EEECCTTSCHHHHHHHH--HHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred             EEEECcccChHHHHHHH--HHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCH
Confidence            8988765444   2456  999999999999999999999999999999999999999998863210     11125688


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-----------------------ecccCccccccccC
Q 040292          146 KHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-----------------------IGTFGFIAPECITT  202 (227)
Q Consensus       146 ~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-----------------------~g~~~y~aPE~~~~  202 (227)
                      ..+..++.|+++||.|||   +++|+||||||+|||++.++.+                       .||+.|+|||.+.+
T Consensus       133 ~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~  209 (308)
T d1p4oa_         133 SKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD  209 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHcc
Confidence            999999999999999999   8999999999999999987643                       47889999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHhCCC
Q 040292          203 GNCNEKSDVYSFGALLLELLTGKK  226 (227)
Q Consensus       203 ~~~~~~~DvwS~G~il~el~tg~~  226 (227)
                      ..++.++||||||+++|||+||..
T Consensus       210 ~~~~~~~Dv~S~G~il~El~t~~~  233 (308)
T d1p4oa_         210 GVFTTYSDVWSFGVVLWEIATLAE  233 (308)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHTSC
T ss_pred             CCCCcccccccHHHHHHHHHhCCC
Confidence            999999999999999999999853

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.9e-32  Score=226.10  Aligned_cols=143  Identities=19%  Similarity=0.282  Sum_probs=121.6

Q ss_pred             eEEEcCCCCc---ccccchhHHHHHhcCCCcccceeEEEEeeCC----cceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNLNT---EEYYCFNCIAFASQMSHKNILKFVGCCLETE----VPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~~~---~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||+++.....   +.+.  +|+.+|++++||||+++++++....    ..+++++++.+|+|.+++...      .+++.
T Consensus        38 vK~i~~~~~~~~~~~~~--~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~------~l~~~  109 (345)
T d1pmea_          38 IKKISPFEHQTYCQRTL--REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ------HLSND  109 (345)
T ss_dssp             EEEECCTTCHHHHHHHH--HHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHC------CCCHH
T ss_pred             EEEEehhcChHHHHHHH--HHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcC------CCCHH
Confidence            8998755433   3556  9999999999999999999997653    234555667789999999643      58899


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce------------------------ecccCccccccccC
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL------------------------IGTFGFIAPECITT  202 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~------------------------~g~~~y~aPE~~~~  202 (227)
                      .+..++.|++.||+|||   +++|+||||||+|||++.++.+                        +||+.|+|||++..
T Consensus       110 ~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~  186 (345)
T d1pmea_         110 HICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN  186 (345)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTT
T ss_pred             HHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhc
Confidence            99999999999999999   9999999999999999886543                        58889999999854


Q ss_pred             -CCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          203 -GNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       203 -~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       ..++.++||||+||++|+|++|+.|
T Consensus       187 ~~~~~~~~DiwSlG~il~eml~g~~p  212 (345)
T d1pmea_         187 SKGYTKSIDIWSVGCILAEMLSNRPI  212 (345)
T ss_dssp             BCSCSTHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCCchhhhhccCceehHHhhCCCC
Confidence             4578999999999999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.97  E-value=8.7e-32  Score=219.23  Aligned_cols=144  Identities=17%  Similarity=0.206  Sum_probs=127.7

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCC-cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSH-KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVA  152 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~  152 (227)
                      ||.+........+.  +|++.++.++| +|++.+++++..+...++||||+ +++|.+++.....    .+++..+..++
T Consensus        35 vK~~~~~~~~~~~~--~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~----~~~~~~~~~i~  107 (293)
T d1csna_          35 IKFEPRRSDAPQLR--DEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGR----KFSVKTVAMAA  107 (293)
T ss_dssp             EEEEECCTTSCCHH--HHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTT----CCCHHHHHHHH
T ss_pred             EEEEccccCcHHHH--HHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhcc----chhhHHHHHHH
Confidence            88887766667777  99999999965 89999999999999999999999 6899998876543    68899999999


Q ss_pred             HHHHHHHHHhhhcCCCCeEEecCCCCceeecCC-----C----------------------------ceecccCcccccc
Q 040292          153 MEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDN-----D----------------------------KLIGTFGFIAPEC  199 (227)
Q Consensus       153 ~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~-----~----------------------------~~~g~~~y~aPE~  199 (227)
                      .|++.||+|||   +++|+||||||+||+++..     +                            ..+||+.|+|||.
T Consensus       108 ~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~  184 (293)
T d1csna_         108 KQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINT  184 (293)
T ss_dssp             HHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred             HHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHH
Confidence            99999999999   9999999999999999642     1                            1158999999999


Q ss_pred             ccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          200 ITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       200 ~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.+..++.++||||||+++|||+||+.|
T Consensus       185 ~~~~~~~~~~DiwSlG~~l~elltg~~P  212 (293)
T d1csna_         185 HLGREQSRRDDLEALGHVFMYFLRGSLP  212 (293)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             hcCCCCChHHHHHHhhHHHHHHHhCCCc
Confidence            9998999999999999999999999987

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-32  Score=226.92  Aligned_cols=157  Identities=21%  Similarity=0.328  Sum_probs=126.2

Q ss_pred             hcCCCCCC-eeec--CCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecc
Q 040292           59 TNNYDPGK-GFLQ--DHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFV  123 (227)
Q Consensus        59 ~~~f~~~~-~~~~--~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~  123 (227)
                      .++|+.+. +.-.  +..  ||.++.....    +.+.  +|+.+|++++|||||+++++|...+      ..|+||||+
T Consensus        28 ~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~--~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~  105 (346)
T d1cm8a_          28 SGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY--RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM  105 (346)
T ss_dssp             -----CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHH--HHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHH--HHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc
Confidence            44555555 3321  332  8998765443    2445  9999999999999999999998654      468999999


Q ss_pred             cCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------
Q 040292          124 ACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------  188 (227)
Q Consensus       124 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------  188 (227)
                       +.+|..++...      .+++..+..++.|++.||+|||   +++|+||||||+||+++.++.+               
T Consensus       106 -~~~l~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~  175 (346)
T d1cm8a_         106 -GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM  175 (346)
T ss_dssp             -SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSC
T ss_pred             -cccHHHHHHhc------cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceeccCCcc
Confidence             56777776532      6899999999999999999999   9999999999999999887643               


Q ss_pred             ---ecccCccccccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 ---IGTFGFIAPECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 ---~g~~~y~aPE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                         .||+.|+|||.+.+. .++.++||||+||++|+|++|++|
T Consensus       176 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~p  218 (346)
T d1cm8a_         176 TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL  218 (346)
T ss_dssp             CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             ccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCC
Confidence               689999999998764 468999999999999999999987

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-32  Score=222.90  Aligned_cols=144  Identities=17%  Similarity=0.259  Sum_probs=118.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEee--------CCcceeEeecccCCChhhhhcCCCCCCCc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLE--------TEVPILVFEFVACGTLADRIHDPNGSQLE  141 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~  141 (227)
                      ||++......    ..+.  +|+.+|++++||||+++++++..        ++..++||||+.++.+........     
T Consensus        40 vK~i~~~~~~~~~~~~~~--~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~-----  112 (318)
T d3blha1          40 LKKVLMENEKEGFPITAL--REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----  112 (318)
T ss_dssp             EEEC----CTTSSCHHHH--HHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTC-----
T ss_pred             EEEEehhhcchHHHHHHH--HHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhccc-----
Confidence            8987654333    3455  99999999999999999999865        345789999998776665544332     


Q ss_pred             ccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce-------------------------ecccCccc
Q 040292          142 PFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL-------------------------IGTFGFIA  196 (227)
Q Consensus       142 ~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~-------------------------~g~~~y~a  196 (227)
                      .+++..+..++.|++.||.|||   +++|+||||||+||+++.++.+                         +||+.|+|
T Consensus       113 ~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~a  189 (318)
T d3blha1         113 KFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRP  189 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCC
T ss_pred             ccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhh
Confidence            6888999999999999999999   9999999999999999876543                         58999999


Q ss_pred             cccccCC-CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          197 PECITTG-NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       197 PE~~~~~-~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      ||++.+. .++.++||||+||++|||++|+.|
T Consensus       190 PE~~~~~~~~~~k~DiwSlGvil~el~~g~~p  221 (318)
T d3blha1         190 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPI  221 (318)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             HHHHcCCCCCCcHHHcccCCceeeeHhhCCCC
Confidence            9998765 589999999999999999999876

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-31  Score=223.14  Aligned_cols=145  Identities=23%  Similarity=0.251  Sum_probs=117.2

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCCCcccceeEEEEeeCC------cceeEeecccCCChhhhhcCCCCCCCcccCHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKFVGCCLETE------VPILVFEFVACGTLADRIHDPNGSQLEPFLMKH  147 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~  147 (227)
                      ||++....  ..+.  +|+.+|++++||||++++++|....      ..++|||||+++.+..+......  ...+++..
T Consensus        50 iK~i~~~~--~~~~--~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~--~~~l~~~~  123 (350)
T d1q5ka_          50 IKKVLQDK--RFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA--KQTLPVIY  123 (350)
T ss_dssp             EEEEECCS--SSCC--HHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHT--TCCCCHHH
T ss_pred             EEEECccc--hHHH--HHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhc--cCCCCHHH
Confidence            89886543  3345  8999999999999999999986532      36899999986543333221000  02689999


Q ss_pred             HHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC-ce--------------------ecccCccccccccC-CCC
Q 040292          148 RLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND-KL--------------------IGTFGFIAPECITT-GNC  205 (227)
Q Consensus       148 ~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~-~~--------------------~g~~~y~aPE~~~~-~~~  205 (227)
                      +..++.|++.||+|||   +++|+||||||+|||++.++ .+                    +||+.|+|||.+.+ ..+
T Consensus       124 ~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  200 (350)
T d1q5ka_         124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY  200 (350)
T ss_dssp             HHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccccChHHhhcccCC
Confidence            9999999999999999   99999999999999998764 21                    58889999998865 468


Q ss_pred             CchhhHHHHHHHHHHHHhCCCC
Q 040292          206 NEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       206 ~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +.++||||+||++|||++|++|
T Consensus       201 ~~~~DIwSlG~il~el~~g~~p  222 (350)
T d1q5ka_         201 TSSIDVWSAGCVLAELLLGQPI  222 (350)
T ss_dssp             CTHHHHHHHHHHHHHHHHTSCS
T ss_pred             CcceeecccceEEEehhhCCCC
Confidence            9999999999999999999976

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-31  Score=215.58  Aligned_cols=144  Identities=19%  Similarity=0.272  Sum_probs=126.1

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHH
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRL  149 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~  149 (227)
                      ||+++.....    +.+.  +|+.+|+.++||||++++++|......++|+|++.++++..++....     .+++..+.
T Consensus        32 vK~i~~~~~~~~~~~~~~--~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~-----~~~~~~~~  104 (292)
T d1unla_          32 LKRVRLDDDDEGVPSSAL--REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG-----DLDPEIVK  104 (292)
T ss_dssp             EEEEESSCSSTTHHHHHH--HHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTT-----CCCHHHHH
T ss_pred             EEEEehhhCChHHHHHHH--HHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccccccccc-----ccchhHHH
Confidence            9998655433    3455  99999999999999999999999999999999999999888877554     68899999


Q ss_pred             HHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce---------------------ecccCccccccccCCC-CCc
Q 040292          150 KVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL---------------------IGTFGFIAPECITTGN-CNE  207 (227)
Q Consensus       150 ~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~---------------------~g~~~y~aPE~~~~~~-~~~  207 (227)
                      .++.|++.||+|||   +++|+||||||+||+++.++..                     .+++.|+|||.+.... ++.
T Consensus       105 ~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~  181 (292)
T d1unla_         105 SFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST  181 (292)
T ss_dssp             HHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCT
T ss_pred             HHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCc
Confidence            99999999999999   8999999999999999876433                     4667799999987665 689


Q ss_pred             hhhHHHHHHHHHHHHhCCCC
Q 040292          208 KSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       208 ~~DvwS~G~il~el~tg~~p  227 (227)
                      ++||||+||++|||++|+.|
T Consensus       182 ~~DiwSlG~il~ell~g~~p  201 (292)
T d1unla_         182 SIDMWSAGCIFAELANAGRP  201 (292)
T ss_dssp             HHHHHHHHHHHHHHTTTSCC
T ss_pred             hhhccccchHHHHHhhCCCC
Confidence            99999999999999999876

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=221.16  Aligned_cols=144  Identities=22%  Similarity=0.323  Sum_probs=125.1

Q ss_pred             eEEEcCCC------CcccccchhHHHHHhcCCC-cccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHH
Q 040292           74 ISEFGDNL------NTEEYYCFNCIAFASQMSH-KNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMK  146 (227)
Q Consensus        74 vK~~~~~~------~~~~~~~~~Ei~~l~~l~H-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~  146 (227)
                      ||.++...      ..+.+.  +|+.+|++++| |||+++++++.+....++||||+.+|+|.+++....     .+++.
T Consensus        57 vK~i~~~~~~~~~~~~~~~~--~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~-----~~~e~  129 (322)
T d1vzoa_          57 MKVLKKATIVQKAKTTEHTR--TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-----RFTEH  129 (322)
T ss_dssp             EEEESEEEEEEEESSGGGCC--CHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHS-----CCCHH
T ss_pred             EEEEehHHhccchHHHHHHH--HHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcc-----cccHH
Confidence            88875432      124566  99999999966 899999999999999999999999999999997654     56788


Q ss_pred             HHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------------ecccCccccccccCC-
Q 040292          147 HRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------------IGTFGFIAPECITTG-  203 (227)
Q Consensus       147 ~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------------~g~~~y~aPE~~~~~-  203 (227)
                      .+..++.|++.||+|||   +++++||||||+||+++.++.+                      .|++.|++||.+... 
T Consensus       130 ~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~  206 (322)
T d1vzoa_         130 EVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD  206 (322)
T ss_dssp             HHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCC
Confidence            89999999999999999   9999999999999999987653                      588899999999754 


Q ss_pred             -CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 -NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 -~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                       .++.++||||+||++|||++|+.|
T Consensus       207 ~~~~~ksDIWSlG~iLyelltG~~P  231 (322)
T d1vzoa_         207 SGHDKAVDWWSLGVLMYELLTGASP  231 (322)
T ss_dssp             ---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred             cCCCchhhhHHHHHHHHHHHhCCCC
Confidence             468899999999999999999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=222.59  Aligned_cols=141  Identities=23%  Similarity=0.322  Sum_probs=120.6

Q ss_pred             eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC------CcceeEeecccCCChhhhhcCCCCCCCccc
Q 040292           74 ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET------EVPILVFEFVACGTLADRIHDPNGSQLEPF  143 (227)
Q Consensus        74 vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l  143 (227)
                      ||++......    +.+.  +|+.+|++++||||++++++|...      ...|+||||+.++ +.+.+..       .+
T Consensus        47 vK~i~~~~~~~~~~~~~~--~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~-l~~~~~~-------~~  116 (355)
T d2b1pa1          47 IKKLSRPFQNQTHAKRAY--RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQM-------EL  116 (355)
T ss_dssp             EEEEESTTSSHHHHHHHH--HHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHHTS-------CC
T ss_pred             EEEEChhhcCHHHHHHHH--HHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchH-HHHhhhc-------CC
Confidence            9999766444    2455  999999999999999999999643      5679999999765 4444432       57


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce--------------------ecccCccccccccCC
Q 040292          144 LMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL--------------------IGTFGFIAPECITTG  203 (227)
Q Consensus       144 ~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~--------------------~g~~~y~aPE~~~~~  203 (227)
                      ++..+..++.|++.||.|||   +.+|+||||||+||+++.++..                    ++|+.|+|||++.+.
T Consensus       117 ~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~  193 (355)
T d2b1pa1         117 DHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTTCCHHHHTTC
T ss_pred             CHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhccccccccccccccccccChhhhcCC
Confidence            89999999999999999999   9999999999999999976543                    588999999999998


Q ss_pred             CCCchhhHHHHHHHHHHHHhCCCC
Q 040292          204 NCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       204 ~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      .+++++||||+||++++|++|+.|
T Consensus       194 ~~~~~~DiwSlG~~l~ell~g~~p  217 (355)
T d2b1pa1         194 GYKENVDIWSVGCIMGEMVRHKIL  217 (355)
T ss_dssp             CCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCCCcccccccchHHHHhhCCCC
Confidence            999999999999999999999986

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=5.8e-31  Score=214.76  Aligned_cols=159  Identities=18%  Similarity=0.172  Sum_probs=127.5

Q ss_pred             hcCCCCCC-eeec--CCC--eEEEcCCCCcccccchhHHHHHhcCCCccccee-EEEEeeCCcceeEeecccCCChhhhh
Q 040292           59 TNNYDPGK-GFLQ--DHP--ISEFGDNLNTEEYYCFNCIAFASQMSHKNILKF-VGCCLETEVPILVFEFVACGTLADRI  132 (227)
Q Consensus        59 ~~~f~~~~-~~~~--~~~--vK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l-~g~~~~~~~~~lV~E~~~~gsL~~~l  132 (227)
                      .++|+.+. |...  +..  ||.+......+++.  +|++++++++|+|++.. .++..+++..++||||+ ++++.+.+
T Consensus        17 ~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~--~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~-~~~l~~~~   93 (299)
T d1ckia_          17 SGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH--IESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLF   93 (299)
T ss_dssp             ECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHH--HHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHH
T ss_pred             eCCCcEEEEEEECCCCCEEEEEEEchhccCHHHH--HHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc-CCchhhhh
Confidence            45565554 4332  222  89888776667777  99999999988776655 45556677888999999 46777666


Q ss_pred             cCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCC--------------------------
Q 040292          133 HDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDND--------------------------  186 (227)
Q Consensus       133 ~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~--------------------------  186 (227)
                      .....    .+++..+..++.|++.||+|||   +++|+||||||+||+++..+                          
T Consensus        94 ~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~  166 (299)
T d1ckia_          94 NFCSR----KFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP  166 (299)
T ss_dssp             HHTTT----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCC
T ss_pred             hhccC----CCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceecccccccccee
Confidence            54332    6899999999999999999999   99999999999999865321                          


Q ss_pred             -----ceecccCccccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          187 -----KLIGTFGFIAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       187 -----~~~g~~~y~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                           ...||+.|+|||.+.+..++.++|||||||++|||+||+.|
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P  212 (299)
T d1ckia_         167 YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP  212 (299)
T ss_dssp             CCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             ccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCc
Confidence                 12589999999999998899999999999999999999987

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=4.5e-31  Score=218.07  Aligned_cols=140  Identities=21%  Similarity=0.317  Sum_probs=121.0

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcC-CCcccceeEEEEeeC--CcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHH
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQM-SHKNILKFVGCCLET--EVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLK  150 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~  150 (227)
                      ||+++.. ..+++.  +|+.+|+++ .||||+++++++...  ...++||||+.+++|..+..        .+++..+..
T Consensus        65 iK~i~~~-~~~~~~--~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--------~l~e~~i~~  133 (328)
T d3bqca1          65 VKILKPV-KKKKIK--REIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ--------TLTDYDIRF  133 (328)
T ss_dssp             EEEECSS-CHHHHH--HHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTT--------SCCHHHHHH
T ss_pred             EEEECHH-HHHHHH--HHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhc--------CCCHHHHHH
Confidence            8888643 235666  999999999 499999999999754  46889999999999987643        688999999


Q ss_pred             HHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc-e--------------------ecccCccccccccCCC-CCch
Q 040292          151 VAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK-L--------------------IGTFGFIAPECITTGN-CNEK  208 (227)
Q Consensus       151 i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~-~--------------------~g~~~y~aPE~~~~~~-~~~~  208 (227)
                      ++.|++.||+|||   +++|+||||||+|||++.++. +                    ++|+.|+|||.+.+.. ++.+
T Consensus       134 i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  210 (328)
T d3bqca1         134 YMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS  210 (328)
T ss_dssp             HHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred             HHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcc
Confidence            9999999999999   999999999999999986542 2                    5788999999987654 7999


Q ss_pred             hhHHHHHHHHHHHHhCCCC
Q 040292          209 SDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       209 ~DvwS~G~il~el~tg~~p  227 (227)
                      +|+||+||+++||++|+.|
T Consensus       211 ~DiwslG~~l~e~~~g~~p  229 (328)
T d3bqca1         211 LDMWSLGCMLASMIFRKEP  229 (328)
T ss_dssp             HHHHHHHHHHHHHHHTCSS
T ss_pred             cchhhhhhhhHHhccCCCC
Confidence            9999999999999999876

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-31  Score=220.08  Aligned_cols=158  Identities=21%  Similarity=0.357  Sum_probs=129.3

Q ss_pred             hcCCCCCC-eee-c-CCC--eEEEcCCCCc----ccccchhHHHHHhcCCCcccceeEEEEeeC-----CcceeEeeccc
Q 040292           59 TNNYDPGK-GFL-Q-DHP--ISEFGDNLNT----EEYYCFNCIAFASQMSHKNILKFVGCCLET-----EVPILVFEFVA  124 (227)
Q Consensus        59 ~~~f~~~~-~~~-~-~~~--vK~~~~~~~~----~~~~~~~Ei~~l~~l~H~niv~l~g~~~~~-----~~~~lV~E~~~  124 (227)
                      .++|+.+. +.- . +..  ||+++.....    +.+.  +|+.+|++++|||||++++++...     ...+++++|+.
T Consensus        28 ~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~--~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~  105 (348)
T d2gfsa1          28 SGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM  105 (348)
T ss_dssp             GGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHH--HHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHH--HHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeec
Confidence            45566655 332 2 222  8998765443    3455  999999999999999999998643     34467778888


Q ss_pred             CCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCce----------------
Q 040292          125 CGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDKL----------------  188 (227)
Q Consensus       125 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~~----------------  188 (227)
                      +|+|.+++...      .+++..+..++.|++.||+|||   +++|+||||||+||+++.++..                
T Consensus       106 gg~L~~~~~~~------~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~  176 (348)
T d2gfsa1         106 GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT  176 (348)
T ss_dssp             SEEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGS
T ss_pred             CCchhhhcccc------cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhcccCcccc
Confidence            99999998642      6899999999999999999999   9999999999999999987643                


Q ss_pred             --ecccCccccccccCCC-CCchhhHHHHHHHHHHHHhCCCC
Q 040292          189 --IGTFGFIAPECITTGN-CNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       189 --~g~~~y~aPE~~~~~~-~~~~~DvwS~G~il~el~tg~~p  227 (227)
                        .|++.|+|||...+.. ++.++||||+||++|+|++|+.|
T Consensus       177 ~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~p  218 (348)
T d2gfsa1         177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL  218 (348)
T ss_dssp             SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCC
Confidence              5788899999877654 68899999999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.4e-25  Score=186.83  Aligned_cols=147  Identities=19%  Similarity=0.207  Sum_probs=113.6

Q ss_pred             eEEEcCCCCc-ccccchhHHHHHhcCC-----------CcccceeEEEEeeC--CcceeEeecccCCChhhh-hcCCCCC
Q 040292           74 ISEFGDNLNT-EEYYCFNCIAFASQMS-----------HKNILKFVGCCLET--EVPILVFEFVACGTLADR-IHDPNGS  138 (227)
Q Consensus        74 vK~~~~~~~~-~~~~~~~Ei~~l~~l~-----------H~niv~l~g~~~~~--~~~~lV~E~~~~gsL~~~-l~~~~~~  138 (227)
                      ||+++..... +.+.  +|+.++++++           |+||+++++++...  ...+++++++..+..... .....  
T Consensus        43 vKvi~~~~~~~~~~~--~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  118 (362)
T d1q8ya_          43 MKIVRGDKVYTEAAE--DEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--  118 (362)
T ss_dssp             EEEECSCHHHHHHHH--HHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTT--
T ss_pred             EEEEeccccchHHHH--HHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeeccccccccccccccc--
Confidence            8998765332 4556  8999888875           57899999988654  345566766654433222 22111  


Q ss_pred             CCcccCHHHHHHHHHHHHHHHHHhhhcCCCCeEEecCCCCceeecCCCc------------------------eecccCc
Q 040292          139 QLEPFLMKHRLKVAMEIANAVAYLHVGFSRPIVFRDIKPFTTHVNDNDK------------------------LIGTFGF  194 (227)
Q Consensus       139 ~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~i~H~dlkp~nil~~~~~~------------------------~~g~~~y  194 (227)
                       ...+++..+..++.|++.||+|||+  ..+|+||||||+||+++.++.                        .+||+.|
T Consensus       119 -~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y  195 (362)
T d1q8ya_         119 -HRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREY  195 (362)
T ss_dssp             -TSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGG
T ss_pred             -ccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccc
Confidence             1267888999999999999999993  388999999999999975431                        1689999


Q ss_pred             cccccccCCCCCchhhHHHHHHHHHHHHhCCCC
Q 040292          195 IAPECITTGNCNEKSDVYSFGALLLELLTGKKG  227 (227)
Q Consensus       195 ~aPE~~~~~~~~~~~DvwS~G~il~el~tg~~p  227 (227)
                      +|||.+....++.++|+||+||++++|++|+.|
T Consensus       196 ~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~p  228 (362)
T d1q8ya_         196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFL  228 (362)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred             cChhhccccCCCccccccchHHHHHHHHHCCCC
Confidence            999999998999999999999999999999876

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.50  E-value=3.1e-15  Score=113.03  Aligned_cols=109  Identities=17%  Similarity=0.110  Sum_probs=80.1

Q ss_pred             hHHHHHhcCCCcccceeEEEEeeCCcceeEeecccCCChhhhhcCCCCCCCcccCHHHHHHHHHHHHHHHHHhhhcCCCC
Q 040292           90 NCIAFASQMSHKNILKFVGCCLETEVPILVFEFVACGTLADRIHDPNGSQLEPFLMKHRLKVAMEIANAVAYLHVGFSRP  169 (227)
Q Consensus        90 ~Ei~~l~~l~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~~  169 (227)
                      +|+..+.++.|++++..+++.    ..+++|||+++..+.+            ++......++.|++.++.|||   ..+
T Consensus        63 ~e~~~l~~l~~~~v~~~~~~~----~~~lvme~~~~~~~~~------------l~~~~~~~i~~ql~~~l~~lH---~~g  123 (191)
T d1zara2          63 NEFRALQKLQGLAVPKVYAWE----GNAVLMELIDAKELYR------------VRVENPDEVLDMILEEVAKFY---HRG  123 (191)
T ss_dssp             HHHHHHHHTTTSSSCCEEEEE----TTEEEEECCCCEEGGG------------CCCSCHHHHHHHHHHHHHHHH---HTT
T ss_pred             HHHHHHHHccCCCcceEEEec----CCEEEEEeeccccccc------------hhhHHHHHHHHHHHHHHHHHh---hCC
Confidence            688899999999999987653    2479999998755432            333445678999999999999   899


Q ss_pred             eEEecCCCCceeecCCCceecccCc-------ccccccc----------CCCCCchhhHHHHHHH
Q 040292          170 IVFRDIKPFTTHVNDNDKLIGTFGF-------IAPECIT----------TGNCNEKSDVYSFGAL  217 (227)
Q Consensus       170 i~H~dlkp~nil~~~~~~~~g~~~y-------~aPE~~~----------~~~~~~~~DvwS~G~i  217 (227)
                      ++||||||+||++++++.....++-       .+.+.+.          ...|+.++|+||..--
T Consensus       124 iiHrDiKP~NILv~~~~~~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         124 IVHGDLSQYNVLVSEEGIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             EECSCCSTTSEEEETTEEEECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred             EEEccCChhheeeeCCCEEEEECCCcccCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence            9999999999999987655434331       1112211          1346788899998643

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.11  E-value=0.0008  Score=51.04  Aligned_cols=57  Identities=4%  Similarity=-0.118  Sum_probs=40.5

Q ss_pred             eEEEcCCCCc--ccccchhHHHHHhcC-CCcccceeEEEEeeCCcceeEeecccCCChhhhh
Q 040292           74 ISEFGDNLNT--EEYYCFNCIAFASQM-SHKNILKFVGCCLETEVPILVFEFVACGTLADRI  132 (227)
Q Consensus        74 vK~~~~~~~~--~~~~~~~Ei~~l~~l-~H~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l  132 (227)
                      ||+.......  ..+.  +|...+..+ .+--+.+++.++..++..++||++++|.++.+..
T Consensus        42 lk~~~~~~~~~~~~~~--~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          42 LKMTDSRYKGTTYDVE--REKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             EEEECGGGTTSTTCHH--HHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHT
T ss_pred             EEEcCCCcccchhhHH--HHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccc
Confidence            6766544333  3445  888887776 3444677888888888899999999987776543

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.73  E-value=0.0017  Score=48.85  Aligned_cols=53  Identities=13%  Similarity=-0.053  Sum_probs=36.8

Q ss_pred             eEEEcCCCCcccccchhHHHHHhcCC--CcccceeEEEEeeCCcceeEeecccCCChh
Q 040292           74 ISEFGDNLNTEEYYCFNCIAFASQMS--HKNILKFVGCCLETEVPILVFEFVACGTLA  129 (227)
Q Consensus        74 vK~~~~~~~~~~~~~~~Ei~~l~~l~--H~niv~l~g~~~~~~~~~lV~E~~~~gsL~  129 (227)
                      +|.-. ......+.  .|...|+.+.  .-.+.+++.+..+++..++||++++|.++.
T Consensus        40 lK~~~-~~~~~~l~--~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          40 VKTDL-SGALNELQ--DEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             EEEEC-SCTTSCHH--HHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             EEeCC-ccCHhHHH--HHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            45433 33334566  8888887773  334667888888888899999999876654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=91.93  E-value=0.14  Score=40.79  Aligned_cols=36  Identities=14%  Similarity=0.060  Sum_probs=23.9

Q ss_pred             hHHHHHhcC-CC--cccceeEEEEeeCCcceeEeecccCCC
Q 040292           90 NCIAFASQM-SH--KNILKFVGCCLETEVPILVFEFVACGT  127 (227)
Q Consensus        90 ~Ei~~l~~l-~H--~niv~l~g~~~~~~~~~lV~E~~~~gs  127 (227)
                      .|...|+.+ .+  ..+.+++.+  ++...++|||++++..
T Consensus        79 ~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lvmE~L~~~~  117 (392)
T d2pula1          79 IESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHLK  117 (392)
T ss_dssp             HHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTSE
T ss_pred             HHHHHHHHhhhhCCCCcceEEEE--cCCCCEEEEeccCCcc
Confidence            688877766 22  345566654  4566789999997644

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=84.53  E-value=0.5  Score=37.38  Aligned_cols=35  Identities=14%  Similarity=0.025  Sum_probs=24.5

Q ss_pred             hHHHHHhcCC-CcccceeEEEEeeCCcceeEeecccCCCh
Q 040292           90 NCIAFASQMS-HKNILKFVGCCLETEVPILVFEFVACGTL  128 (227)
Q Consensus        90 ~Ei~~l~~l~-H~niv~l~g~~~~~~~~~lV~E~~~~gsL  128 (227)
                      +|..+++.+. +.=..++++++.+    .+|+||++|.++
T Consensus        93 ~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~~l  128 (395)
T d1nw1a_          93 AESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRPL  128 (395)
T ss_dssp             HHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEEC
T ss_pred             HHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEeccccC
Confidence            8888888883 3334577887743    589999987544