Your job contains 1 sequence.
>040293
MAGWFYLGGREEARSKQEEEEEEKEENLYLYRSSANEEIYNSTKGFELWPQYYHQQQENM
SNYLSFGVGPSRRSSSNFINAAAASDESSRSGGFVMRQGVGGGGGGGGGGMNCQDCGNQA
KKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQRHQQQQEQQQLNQQD
SQHHHHHHHQQQQFRGENPKRQRENQGLEVSQFPSELSSSAVFRCVRAIDDPDEEFAYQT
AVHIGGHVFKGILYDQGPENRYTAAAESSHSQQLNLITAATATTTTTTGTVAAGTSNPSA
NLIDPSLYPAPLNAFIAGTQFFPPPRS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040293
(327 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2013109 - symbol:SRS7 "AT1G19790" species:3702... 347 8.8e-59 2
TAIR|locus:2005659 - symbol:SRS5 "AT1G75520" species:3702... 587 4.6e-57 1
TAIR|locus:2080818 - symbol:STY1 "AT3G51060" species:3702... 308 2.0e-53 2
TAIR|locus:2155021 - symbol:SHI "SHORT INTERNODES" specie... 280 1.1e-48 2
TAIR|locus:2122234 - symbol:STY2 "AT4G36260" species:3702... 237 3.0e-43 3
TAIR|locus:2053134 - symbol:SRS4 "AT2G18120" species:3702... 212 3.9e-35 2
TAIR|locus:2050074 - symbol:SRS3 "SHI-related sequence3" ... 211 6.2e-33 2
TAIR|locus:2183078 - symbol:SRS8 "AT5G33210" species:3702... 236 1.1e-22 2
TAIR|locus:2096169 - symbol:SRS6 "AT3G54430" species:3702... 186 2.3e-22 2
>TAIR|locus:2013109 [details] [associations]
symbol:SRS7 "AT1G19790" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 EMBL:AC007797 InterPro:IPR007818
InterPro:IPR006511 InterPro:IPR006510 Pfam:PF05142
TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623 EMBL:AY924676 IPI:IPI00534060
PIR:A86331 RefSeq:NP_001031069.1 RefSeq:NP_173409.1
UniGene:At.51177 UniGene:At.68779 EnsemblPlants:AT1G19790.1
EnsemblPlants:AT1G19790.2 GeneID:838567 KEGG:ath:AT1G19790
TAIR:At1g19790 InParanoid:Q9FXH7 OMA:DHNEDKS PhylomeDB:Q9FXH7
ProtClustDB:CLSN2682535 Genevestigator:Q9FXH7 Uniprot:Q9FXH7
Length = 345
Score = 347 (127.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 78/165 (47%), Positives = 88/165 (53%)
Query: 1 MAGWFYLGGXXXXXXXXXXXXXXXX--XNLYLYRSSANEEIYNSTKGFELWP-QYYHQQQ 57
MAG FYLGG N YLY +EIYN+ KGFE++P QY+ QQQ
Sbjct: 1 MAGLFYLGGRDHNKQDHHQEKDHNEDKSNNYLYLYK--DEIYNNNKGFEIFPPQYFQQQQ 58
Query: 58 ENM-----SNYLSFGVGPXXXXXXXXXXXXXXXDESSRSGGFVMRQXXXXXXXXXXXXMN 112
+ +N SFG+ P + S +R MN
Sbjct: 59 QQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTRQGNMN 118
Query: 113 CQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 157
CQDCGNQAKKDCPHMRCRTCCKSRGF CQTHVKSTWV AAKRRER
Sbjct: 119 CQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRER 163
Score = 274 (101.5 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 67/134 (50%), Positives = 80/134 (59%)
Query: 205 NQGLEVSQFPSELSSSAVFRCVR--AIDDPDEEFAYQTAVHIGGHVFKGILYDQGPEN-- 260
+ GLE S P E+SS AVFRC+R +IDD DEE+AYQTAV IGGHVFKGILYDQGP +
Sbjct: 215 SSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDH 274
Query: 261 -RYTAA--AESSHSQQLNLIXXXXXXXXXXXXXXXXXXSNPSANLIDPS-LYPA---PLN 313
RY+++ E+SH LNL+ N + IDPS LY A P N
Sbjct: 275 HRYSSSLNGETSHQHHLNLMDSTPSAATTNAVTAV----NTNNGSIDPSSLYTAVATPFN 330
Query: 314 AFIAG-TQFFPPPR 326
AF+AG T FF R
Sbjct: 331 AFVAGGTPFFASSR 344
>TAIR|locus:2005659 [details] [associations]
symbol:SRS5 "AT1G75520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0048467 "gynoecium development"
evidence=IGI] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0048438 "floral whorl development" evidence=RCA]
[GO:0048439 "flower morphogenesis" evidence=RCA] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC006434 GO:GO:0048467
InterPro:IPR007818 InterPro:IPR006511 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623
HOGENOM:HOG000242956 ProtClustDB:CLSN2682535 EMBL:AY800620
EMBL:AY924730 IPI:IPI00544601 PIR:F96785 RefSeq:NP_177684.1
UniGene:At.50038 STRING:Q9LQZ5 PRIDE:Q9LQZ5
EnsemblPlants:AT1G75520.1 GeneID:843888 KEGG:ath:AT1G75520
TAIR:At1g75520 eggNOG:NOG314702 InParanoid:Q9LQZ5 OMA:SGFTVMR
PhylomeDB:Q9LQZ5 ArrayExpress:Q9LQZ5 Genevestigator:Q9LQZ5
Uniprot:Q9LQZ5
Length = 346
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 147/358 (41%), Positives = 174/358 (48%)
Query: 1 MAGWFYLGGXXXXXXXXXXXXXXXXXN---------LYLYRSSANEEIYNSTKGFELWP- 50
MAG+FYLGG + LYLY+ +EIYN+ KGFE+WP
Sbjct: 1 MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYK----DEIYNNNKGFEIWPP 56
Query: 51 QYY----HQQQENMSNYLSFGVGPXXXXXXXXXXXXXXXDESSRSGGF--VMRQXXXXXX 104
QY+ HQQQ+ + S + SRS F V
Sbjct: 57 QYFQQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFT 116
Query: 105 XXXXXXMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERXXXXXXX 164
MNCQDCGNQAKKDCPHMRCRTCCKSRGF CQTHVKSTWVPAAKRRER
Sbjct: 117 VTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASL 176
Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRG------ENPK--RQRENQGLEVSQ-FPS 215
G N + N GLEVSQ P
Sbjct: 177 QHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPP 236
Query: 216 ELSSSAVFRCVRAI----DDPDEEFAYQTAVHIGGHVFKGILYDQGPENRYTAAAESSHS 271
E++S A+FRCVR D+ D+ +AYQTAV+IGGH+FKGILYDQGPE++ ++ H
Sbjct: 237 EVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQ-----DNHH- 290
Query: 272 QQLNLIXXXXXXXXXXXXXXXXXXSNPSANL-IDPS-LYPAPLNAFIAGTQFFPPPRS 327
LNL+ N + L +DPS LYPA LN+FIAGT FF PPRS
Sbjct: 291 --LNLLASTATTTNVEETATKTVTGNNNNGLMLDPSSLYPAQLNSFIAGTPFFTPPRS 346
>TAIR|locus:2080818 [details] [associations]
symbol:STY1 "AT3G51060" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=NAS]
[GO:0010051 "xylem and phloem pattern formation" evidence=IGI]
[GO:0048479 "style development" evidence=IGI] [GO:0048480 "stigma
development" evidence=IGI] [GO:0010252 "auxin homeostasis"
evidence=IGI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
GO:GO:0005634 EMBL:CP002686 GO:GO:0045893 GO:GO:0003677
GO:GO:0010051 GO:GO:0048479 GO:GO:0010252 IPI:IPI00518827
RefSeq:NP_190675.4 UniGene:At.35427 PRIDE:F4J383
EnsemblPlants:AT3G51060.1 GeneID:824270 KEGG:ath:AT3G51060
OMA:CTRIPSH GO:GO:0048480 InterPro:IPR007818 InterPro:IPR006511
InterPro:IPR006510 Pfam:PF05142 TIGRFAMs:TIGR01624
TIGRFAMs:TIGR01623 Uniprot:F4J383
Length = 370
Score = 308 (113.5 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 73/141 (51%), Positives = 87/141 (61%)
Query: 205 NQGLEVSQFPSELSSSAVFRCVR--AIDDPDEEFAYQTAVHIGGHVFKGILYDQGPENR- 261
+ GLEV FP+E+SSSAVFRCVR +++D +EEFAYQTAV IGGH+FKGILYD GP +
Sbjct: 230 HSGLEVGNFPAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSG 289
Query: 262 ---YT--AAAESSH----SQQLNLIXXXXXXXXXXXXXX-----XXXXSNPSANLIDPS- 306
Y AA ESS +QQLNLI S +A IDP+
Sbjct: 290 GGGYNVVAAGESSSGGGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAA 349
Query: 307 LYPAPLNAFIAGTQFFPPPRS 327
LYP P+N F+AGTQFFP PRS
Sbjct: 350 LYPTPINTFMAGTQFFPNPRS 370
Score = 262 (97.3 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 54/122 (44%), Positives = 71/122 (58%)
Query: 38 EIYNSTKGFELWPQYY-HQQQENM-SNYLSFGVGPXXXXXXXXXXXXXXXDESSRSGGFV 95
E++ + E+ Q+ HQQ+ ++ S+ GVGP + R+ +
Sbjct: 70 ELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETSTAG-AGRAAAMM 128
Query: 96 MRQXXXXXXXXXXXXMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRR 155
M + ++CQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPAAKRR
Sbjct: 129 MIRSGGSGGGSGG--VSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRR 186
Query: 156 ER 157
ER
Sbjct: 187 ER 188
Score = 93 (37.8 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 28/58 (48%), Positives = 31/58 (53%)
Query: 195 RGEN-PKRQREN----------------QGLEVSQFPSELSSSAVFRCVRAIDDPDEE 235
RGE+ PKR REN GLEV FP+E+SSSAVFRCVR D E
Sbjct: 203 RGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSSVEDGE 260
>TAIR|locus:2155021 [details] [associations]
symbol:SHI "SHORT INTERNODES" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0009739 "response to gibberellin stimulus"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=TAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 EMBL:AB022211 GO:GO:0009740
InterPro:IPR007818 InterPro:IPR006511 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623
HOGENOM:HOG000242956 EMBL:AF152555 EMBL:AB493816 IPI:IPI00516668
RefSeq:NP_201436.1 UniGene:At.9638 STRING:Q9XGX0
EnsemblPlants:AT5G66350.1 GeneID:836767 KEGG:ath:AT5G66350
TAIR:At5g66350 eggNOG:NOG312758 InParanoid:Q9XGX0 OMA:EEEYAYK
PhylomeDB:Q9XGX0 ProtClustDB:CLSN2686693 Genevestigator:Q9XGX0
Uniprot:Q9XGX0
Length = 331
Score = 280 (103.6 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 64/127 (50%), Positives = 77/127 (60%)
Query: 207 GLEVSQFPSELSSSAVFRCVR--AIDDPDEEFAYQTAVHIGGHVFKGILYDQGPENRYTA 264
GLEV FP E+SSSAVFRCVR ++DD +EE+AY+TAV IGGHVFKG+LYDQGP R
Sbjct: 208 GLEVGNFPPEVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQGPAER--- 264
Query: 265 AAESSHSQQLNLIXXXXXXXXXXXXXX--XXXXSNPSANLIDP-SL-YPAPLNAFIAGTQ 320
++ SQ LNLI + S + IDP SL YP P+N F+ GT
Sbjct: 265 SSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTH 324
Query: 321 FFPPPRS 327
FF RS
Sbjct: 325 FFSNSRS 331
Score = 245 (91.3 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 56/123 (45%), Positives = 64/123 (52%)
Query: 38 EIYNSTKGFELWPQYYHQQQENMSNYLS---FGVGPXXXXXXXXXXXXXXXDESSRSGGF 94
E++ E+ Q QQQ+ + Y S GVGP SGG
Sbjct: 58 ELWQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIET------------SGGA 105
Query: 95 VMRQXXXXXXXXXXXXMNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKR 154
+M +CQDCGNQ+KKDC HMRCRTCCKSRG C THVKSTWVPAAKR
Sbjct: 106 LMMMRSGSGSGGP----SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKR 161
Query: 155 RER 157
RER
Sbjct: 162 RER 164
Score = 39 (18.8 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 200 KRQRENQGLEVSQFPSELSSSAVFRCVRAIDDPDEEFAY 238
KR+ Q L Q P +L S R I AY
Sbjct: 160 KRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAY 198
>TAIR|locus:2122234 [details] [associations]
symbol:STY2 "AT4G36260" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=NAS] [GO:0010051 "xylem
and phloem pattern formation" evidence=IGI;RCA] [GO:0048479 "style
development" evidence=IGI] [GO:0048480 "stigma development"
evidence=IGI] [GO:0010252 "auxin homeostasis" evidence=IGI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009944
"polarity specification of adaxial/abaxial axis" evidence=RCA]
[GO:0010014 "meristem initiation" evidence=RCA] [GO:0048439 "flower
morphogenesis" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0010051 EMBL:AL022141 EMBL:AL161589
GO:GO:0048479 GO:GO:0010252 GO:GO:0048480 InterPro:IPR007818
InterPro:IPR006511 InterPro:IPR006510 Pfam:PF05142
TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623 IPI:IPI00529716 PIR:T04595
RefSeq:NP_195349.1 UniGene:At.31338 STRING:O65517 PRIDE:O65517
EnsemblPlants:AT4G36260.1 GeneID:829783 KEGG:ath:AT4G36260
TAIR:At4g36260 eggNOG:NOG125435 HOGENOM:HOG000242956 OMA:ITISCRD
PhylomeDB:O65517 ProtClustDB:CLSN2915899 ArrayExpress:O65517
Genevestigator:O65517 Uniprot:O65517
Length = 322
Score = 237 (88.5 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 37/47 (78%), Positives = 43/47 (91%)
Query: 111 MNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 157
++C+DCGNQAKKDC HMRCRTCCKSRGF C THV+STW+P A+RRER
Sbjct: 92 ISCRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRER 138
Score = 197 (74.4 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 51/134 (38%), Positives = 70/134 (52%)
Query: 207 GLEVSQ--FPSELSSSAVFRCVR--AIDDP-DEEFAYQTAVHIGGHVFKGILYDQGPENR 261
GLE+ + FP E+SS A+FRCV+ +DD D ++AYQT V+IGGH+FKGILYDQGPE+
Sbjct: 189 GLEMGEASFPGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPESS 248
Query: 262 YTAAAESSHSQQLNLIXXXXXXXXXXXXXXXXXXSN-PSANLIDPS---LYPAPLNAFI- 316
Y + Q + SA +DP+ Y + + +
Sbjct: 249 YMSGGSGGSDHQSSSAGGGGGGHPFNPPVVTDGGGGVSSAMFVDPNSGGYYSSNMTTSVF 308
Query: 317 --AGTQFFP-PPRS 327
GTQF+ PPRS
Sbjct: 309 MPPGTQFYQNPPRS 322
Score = 50 (22.7 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 20/73 (27%), Positives = 29/73 (39%)
Query: 1 MAGWFYLGGXXXXXXXXXXXXXXXX-XNLYLYRSSANEEIYNSTKGFELW---PQ----- 51
MAG F LGG N YRS+AN N + ++W P+
Sbjct: 1 MAGIFSLGGNNNNNGDEEEENQQQQKTNWVWYRSNANTNNINPSSSQQVWQIPPEQMLMH 60
Query: 52 -YYHQQQENMSNY 63
+ H QQ+++ Y
Sbjct: 61 HHSHPQQQSLDLY 73
>TAIR|locus:2053134 [details] [associations]
symbol:SRS4 "AT2G18120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007212
InterPro:IPR007818 InterPro:IPR006511 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623
HOGENOM:HOG000242956 IPI:IPI00516443 PIR:E84560 RefSeq:NP_179404.1
UniGene:At.40042 STRING:Q9SI19 EnsemblPlants:AT2G18120.1
GeneID:816325 KEGG:ath:AT2G18120 TAIR:At2g18120 eggNOG:NOG262123
OMA:PIAKRRE PhylomeDB:Q9SI19 ProtClustDB:CLSN2912875
ArrayExpress:Q9SI19 Genevestigator:Q9SI19 Uniprot:Q9SI19
Length = 222
Score = 212 (79.7 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 34/47 (72%), Positives = 39/47 (82%)
Query: 111 MNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 157
++CQ+CGNQAKK C H RCRTCCKS G C THV+STW+P AKRRER
Sbjct: 70 ISCQECGNQAKKGCTHGRCRTCCKSNGLHCPTHVRSTWIPIAKRRER 116
Score = 184 (69.8 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 194 FRGENPKRQRENQGLEVSQ--FPSELSSSAVFRCVR--AIDDPDEEFAYQTAVHIGGHVF 249
+R N ++ GLE+ + FP E+SS A+FRCVR DD + ++AYQT V I GH+F
Sbjct: 137 YRDINQHATLDSSGLEMGETRFPDEVSSDALFRCVRMSGTDDGEGQYAYQTTVGIAGHLF 196
Query: 250 KGILYDQGPENR 261
KGILY+QGPEN+
Sbjct: 197 KGILYNQGPENK 208
>TAIR|locus:2050074 [details] [associations]
symbol:SRS3 "SHI-related sequence3" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
EMBL:CP002685 EMBL:AC006841 InterPro:IPR007818 InterPro:IPR006511
InterPro:IPR006510 Pfam:PF05142 TIGRFAMs:TIGR01624
TIGRFAMs:TIGR01623 HOGENOM:HOG000242956 IPI:IPI00532088 PIR:G84600
RefSeq:NP_179735.1 UniGene:At.39573 EnsemblPlants:AT2G21400.1
GeneID:816679 KEGG:ath:AT2G21400 TAIR:At2g21400 InParanoid:Q9SJT8
OMA:QTHIKST PhylomeDB:Q9SJT8 ProtClustDB:CLSN2913148
Genevestigator:Q9SJT8 Uniprot:Q9SJT8
Length = 174
Score = 211 (79.3 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 33/42 (78%), Positives = 38/42 (90%)
Query: 113 CQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKR 154
C+DCGNQAKKDC +MRCRTCCKS+ F CQTH+KSTWVPA +R
Sbjct: 9 CEDCGNQAKKDCVYMRCRTCCKSKAFHCQTHIKSTWVPAYRR 50
Score = 164 (62.8 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 213 FPSELSSSAVFRCVR--AIDDPDEEFAYQTAVHIGGHVFKGILYDQG 257
FP+ELSS A FRCV+ +IDD E++AYQT V+IGGHVF+GIL+DQG
Sbjct: 77 FPAELSSLADFRCVKVSSIDDGKEQYAYQTTVNIGGHVFRGILHDQG 123
>TAIR|locus:2183078 [details] [associations]
symbol:SRS8 "AT5G33210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR007818 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01623 IPI:IPI00529608 RefSeq:NP_198306.1
UniGene:At.55108 EnsemblPlants:AT5G33210.1 GeneID:833279
KEGG:ath:AT5G33210 PhylomeDB:F4KH89 ArrayExpress:F4KH89
Uniprot:F4KH89
Length = 173
Score = 236 (88.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 39/47 (82%), Positives = 43/47 (91%)
Query: 111 MNCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRER 157
++CQD GNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA KRRER
Sbjct: 50 VSCQDFGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPATKRRER 96
Score = 41 (19.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 195 RGEN-PKRQREN 205
RGE+ PKR REN
Sbjct: 111 RGESVPKRHREN 122
>TAIR|locus:2096169 [details] [associations]
symbol:SRS6 "AT3G54430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010073 "meristem maintenance" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132971 InterPro:IPR007818
InterPro:IPR006511 InterPro:IPR006510 Pfam:PF05142
TIGRFAMs:TIGR01624 TIGRFAMs:TIGR01623 HOGENOM:HOG000242956
EMBL:AY052675 EMBL:AF446889 IPI:IPI00544080 PIR:T47602
RefSeq:NP_191011.1 UniGene:At.26489 STRING:Q9M2U4
EnsemblPlants:AT3G54430.1 GeneID:824609 KEGG:ath:AT3G54430
TAIR:At3g54430 eggNOG:NOG328229 InParanoid:Q9M2U4 OMA:WIPSSAT
PhylomeDB:Q9M2U4 ProtClustDB:CLSN2915656 Genevestigator:Q9M2U4
Uniprot:Q9M2U4
Length = 183
Score = 186 (70.5 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 113 CQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRR 155
C+DCGN+AKK+C RCRTCCKSRG+ C THVKSTW+P++ R
Sbjct: 41 CRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR 83
Score = 88 (36.0 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 203 RENQGLEVSQFPSELSSSAVFRCVR--AIDDPDE-EFAYQTAVHIGGHVFKGILYDQGPE 259
R+ +G P ++ + AVF+ R AI + ++ E YQ V I GH+FKG L+ G +
Sbjct: 114 RQERGFREG-LPGKIEAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYYGVD 172
Query: 260 N 260
+
Sbjct: 173 H 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 327 229 0.00082 113 3 11 22 0.41 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 612 (65 KB)
Total size of DFA: 203 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.18u 0.13s 16.31t Elapsed: 00:00:01
Total cpu time: 16.18u 0.13s 16.31t Elapsed: 00:00:01
Start: Fri May 10 12:11:12 2013 End: Fri May 10 12:11:13 2013