Query 040294
Match_columns 360
No_of_seqs 406 out of 3912
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 10:57:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040294.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040294hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 8.4E-40 2.9E-44 302.2 14.2 155 200-360 36-203 (307)
2 4aw0_A HPDK1, 3-phosphoinositi 100.0 6E-40 2.1E-44 302.8 12.1 157 200-360 32-203 (311)
3 4asz_A BDNF/NT-3 growth factor 100.0 4.7E-40 1.6E-44 303.4 10.3 158 200-360 13-199 (299)
4 4aoj_A High affinity nerve gro 100.0 1.3E-39 4.5E-44 304.4 12.0 158 200-360 41-229 (329)
5 4gt4_A Tyrosine-protein kinase 100.0 1.5E-39 5.1E-44 301.3 11.0 156 202-360 28-216 (308)
6 4b9d_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 302.5 10.7 156 200-360 24-194 (350)
7 4fih_A Serine/threonine-protei 100.0 8.5E-39 2.9E-43 299.4 13.2 154 200-360 74-239 (346)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.9E-38 6.3E-43 296.2 11.5 157 200-360 58-225 (336)
9 4fie_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 301.6 14.0 154 200-360 151-316 (423)
10 3fpq_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 287.0 13.3 150 203-360 29-199 (290)
11 3hyh_A Carbon catabolite-derep 100.0 8.4E-38 2.9E-42 284.4 13.1 154 199-360 12-180 (275)
12 3hmm_A TGF-beta receptor type- 100.0 1E-37 3.5E-42 288.9 12.8 157 201-360 4-181 (303)
13 3ubd_A Ribosomal protein S6 ki 100.0 2E-38 7E-43 292.3 7.6 155 200-360 24-195 (304)
14 4g31_A Eukaryotic translation 100.0 9E-38 3.1E-42 288.4 11.6 158 200-360 5-199 (299)
15 4ase_A Vascular endothelial gr 100.0 6.4E-37 2.2E-41 288.5 10.9 160 198-360 62-256 (353)
16 3v5w_A G-protein coupled recep 100.0 4.5E-35 1.6E-39 293.4 13.7 154 199-360 188-359 (689)
17 4b99_A Mitogen-activated prote 100.0 1.1E-34 3.6E-39 277.8 12.5 156 200-360 54-231 (398)
18 4f9c_A Cell division cycle 7-r 100.0 1.5E-34 5.2E-39 273.6 11.1 136 198-340 19-169 (361)
19 3uto_A Twitchin; kinase, muscl 100.0 6.8E-34 2.3E-38 284.5 13.5 156 199-360 156-325 (573)
20 4aw2_A Serine/threonine-protei 100.0 1.7E-32 5.9E-37 266.0 12.6 163 194-360 68-245 (437)
21 2vd5_A DMPK protein; serine/th 100.0 4.3E-32 1.5E-36 261.4 12.1 163 194-360 55-232 (412)
22 3uim_A Brassinosteroid insensi 100.0 2.4E-31 8.3E-36 247.9 14.4 173 187-360 17-204 (326)
23 3v8s_A RHO-associated protein 100.0 1.1E-31 3.8E-36 258.3 12.2 160 195-360 64-238 (410)
24 2qkw_B Protein kinase; three-h 100.0 1.2E-31 4.2E-36 249.5 11.1 165 193-360 32-210 (321)
25 3s95_A LIMK-1, LIM domain kina 100.0 7.8E-31 2.7E-35 242.8 14.3 158 200-360 10-191 (310)
26 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.7E-31 1.6E-35 250.1 12.5 159 199-360 64-254 (365)
27 3fe3_A MAP/microtubule affinit 100.0 7.5E-31 2.6E-35 245.5 12.8 155 199-360 14-182 (328)
28 1o6l_A RAC-beta serine/threoni 100.0 1.1E-30 3.8E-35 245.2 13.3 156 199-360 4-174 (337)
29 3zgw_A Maternal embryonic leuc 100.0 9.9E-31 3.4E-35 246.5 12.8 157 199-360 9-178 (347)
30 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.4E-31 3.2E-35 247.3 12.7 157 198-360 21-193 (353)
31 2nru_A Interleukin-1 receptor- 100.0 4.3E-30 1.5E-34 237.2 16.7 170 187-360 12-204 (307)
32 2psq_A Fibroblast growth facto 100.0 9.8E-31 3.4E-35 248.7 12.5 159 199-360 80-274 (370)
33 3fxz_A Serine/threonine-protei 100.0 2.7E-30 9.3E-35 238.2 15.1 155 199-360 19-185 (297)
34 4fr4_A YANK1, serine/threonine 100.0 1.6E-30 5.6E-35 248.1 13.8 154 200-360 15-183 (384)
35 1tki_A Titin; serine kinase, m 100.0 2E-30 6.9E-35 241.8 14.0 156 199-360 4-172 (321)
36 3soc_A Activin receptor type-2 100.0 1.3E-30 4.4E-35 243.0 12.1 156 199-360 23-202 (322)
37 1fot_A TPK1 delta, CAMP-depend 100.0 2.8E-30 9.5E-35 240.6 14.0 153 199-360 5-172 (318)
38 4dc2_A Protein kinase C IOTA t 100.0 1.4E-30 4.7E-35 249.5 12.2 156 199-360 51-222 (396)
39 3cbl_A C-FES, proto-oncogene t 100.0 8.2E-31 2.8E-35 249.8 9.9 159 199-360 113-284 (377)
40 3tki_A Serine/threonine-protei 100.0 1.3E-30 4.6E-35 243.2 11.0 158 199-360 6-176 (323)
41 3kul_A Ephrin type-A receptor 100.0 2.8E-30 9.5E-35 241.2 12.8 158 200-360 49-223 (325)
42 1xjd_A Protein kinase C, theta 100.0 2.8E-30 9.6E-35 243.3 12.9 158 197-360 14-187 (345)
43 4hcu_A Tyrosine-protein kinase 100.0 1.5E-30 5.1E-35 236.0 10.5 157 200-360 10-176 (269)
44 2c30_A Serine/threonine-protei 100.0 5.4E-30 1.8E-34 238.8 14.4 166 188-360 23-210 (321)
45 3qd2_B Eukaryotic translation 100.0 3.4E-30 1.2E-34 239.9 13.0 159 199-360 5-245 (332)
46 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.2E-30 1.1E-34 233.5 12.1 158 199-360 7-174 (268)
47 3niz_A Rhodanese family protei 100.0 4.3E-30 1.5E-34 238.4 13.1 156 199-360 20-188 (311)
48 2qol_A Ephrin receptor; recept 100.0 3.2E-30 1.1E-34 245.4 12.4 158 200-360 45-219 (373)
49 4eqm_A Protein kinase; transfe 100.0 3.8E-30 1.3E-34 236.8 12.2 156 200-360 11-181 (294)
50 3a8x_A Protein kinase C IOTA t 100.0 4E-30 1.4E-34 242.2 12.5 155 200-360 9-179 (345)
51 2yab_A Death-associated protei 100.0 6.7E-30 2.3E-34 242.1 13.9 155 199-360 11-187 (361)
52 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.3E-30 1.8E-34 241.8 13.0 152 200-360 41-207 (350)
53 2acx_A G protein-coupled recep 100.0 6.5E-30 2.2E-34 254.6 13.8 156 199-360 183-354 (576)
54 2i0e_A Protein kinase C-beta I 100.0 5.4E-30 1.8E-34 242.1 12.2 157 198-360 18-190 (353)
55 1ob3_A PFPK5, cell division co 100.0 5E-30 1.7E-34 235.0 11.3 155 200-360 2-169 (288)
56 3p86_A Serine/threonine-protei 100.0 5.3E-30 1.8E-34 237.7 11.2 156 199-360 36-208 (309)
57 1kob_A Twitchin; kinase, intra 100.0 1.4E-29 4.8E-34 242.1 14.2 156 199-360 50-219 (387)
58 3vhe_A Vascular endothelial gr 100.0 3.4E-30 1.2E-34 243.1 9.8 166 192-360 14-264 (359)
59 1luf_A Muscle-specific tyrosin 100.0 5.1E-30 1.7E-34 240.3 10.7 160 198-360 45-245 (343)
60 2izr_A Casein kinase I isoform 100.0 1.1E-29 3.7E-34 237.4 12.8 158 199-360 8-186 (330)
61 3o0g_A Cell division protein k 100.0 1.6E-29 5.6E-34 231.9 13.6 155 200-360 2-170 (292)
62 2r5t_A Serine/threonine-protei 100.0 8E-30 2.7E-34 242.6 11.9 156 199-360 37-208 (373)
63 3gen_A Tyrosine-protein kinase 100.0 4.4E-30 1.5E-34 234.4 9.6 158 199-360 23-190 (283)
64 3a62_A Ribosomal protein S6 ki 100.0 7.6E-30 2.6E-34 238.4 11.1 156 199-360 16-190 (327)
65 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.7E-29 5.8E-34 250.6 14.2 157 199-360 184-358 (543)
66 2zv2_A Calcium/calmodulin-depe 100.0 1.4E-29 4.6E-34 233.2 12.3 155 199-360 12-206 (298)
67 2pmi_A Negative RE, cyclin-dep 100.0 2.5E-29 8.6E-34 233.8 13.9 156 199-360 4-177 (317)
68 3kex_A Receptor tyrosine-prote 100.0 9E-30 3.1E-34 237.5 10.9 157 200-360 13-186 (325)
69 3lb7_A RAF proto-oncogene seri 100.0 3.3E-29 1.1E-33 232.0 14.6 156 199-360 35-203 (307)
70 3p1a_A MYT1 kinase, membrane-a 100.0 8E-30 2.7E-34 236.5 10.4 154 200-360 57-225 (311)
71 3l9p_A Anaplastic lymphoma kin 100.0 3.3E-30 1.1E-34 244.8 7.9 158 200-360 71-255 (367)
72 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.3E-29 4.5E-34 237.8 11.8 154 199-360 8-176 (336)
73 2bdw_A Hypothetical protein K1 100.0 1.6E-29 5.6E-34 239.6 12.5 155 199-360 28-199 (362)
74 3soa_A Calcium/calmodulin-depe 100.0 1.6E-29 5.6E-34 245.7 12.8 157 198-360 9-182 (444)
75 4ejn_A RAC-alpha serine/threon 100.0 6.4E-30 2.2E-34 248.9 9.7 156 199-360 147-318 (446)
76 2y94_A 5'-AMP-activated protei 100.0 3.2E-29 1.1E-33 245.5 14.7 155 199-360 15-184 (476)
77 3c0i_A Peripheral plasma membr 100.0 1.6E-29 5.4E-34 238.6 12.0 156 200-360 24-202 (351)
78 2x4f_A Myosin light chain kina 100.0 1.6E-29 5.5E-34 240.6 11.9 150 205-360 94-257 (373)
79 1rjb_A FL cytokine receptor; k 100.0 1.6E-29 5.6E-34 237.2 11.9 159 199-360 44-243 (344)
80 3uc3_A Serine/threonine-protei 100.0 2E-29 6.9E-34 238.8 12.5 155 199-360 19-186 (361)
81 3tt0_A Basic fibroblast growth 100.0 1.4E-29 4.7E-34 241.7 11.4 158 200-360 69-262 (382)
82 2ivs_A Proto-oncogene tyrosine 100.0 2.1E-29 7.1E-34 233.1 12.2 159 199-360 22-221 (314)
83 2y0a_A Death-associated protei 100.0 4.1E-29 1.4E-33 233.4 14.0 154 200-360 11-186 (326)
84 4euu_A Serine/threonine-protei 100.0 2.5E-29 8.4E-34 233.8 12.3 155 200-360 9-184 (319)
85 3poz_A Epidermal growth factor 100.0 1E-29 3.6E-34 237.4 9.7 157 200-360 15-188 (327)
86 1opk_A P150, C-ABL, proto-onco 100.0 1.7E-29 5.8E-34 249.1 11.6 158 199-360 219-388 (495)
87 3rp9_A Mitogen-activated prote 100.0 2.6E-29 9E-34 245.3 12.4 157 199-360 52-252 (458)
88 3dls_A PAS domain-containing s 100.0 4E-29 1.4E-33 234.4 12.3 156 198-360 22-198 (335)
89 3ugc_A Tyrosine-protein kinase 100.0 1.5E-29 5E-34 232.5 9.2 158 200-360 10-186 (295)
90 3pfq_A PKC-B, PKC-beta, protei 100.0 6.5E-29 2.2E-33 253.3 14.7 157 198-360 339-511 (674)
91 3q4u_A Activin receptor type-1 100.0 5.8E-29 2E-33 228.7 12.8 159 199-360 7-186 (301)
92 1t46_A HOMO sapiens V-KIT hard 100.0 2.5E-29 8.4E-34 232.5 10.3 158 200-360 23-216 (313)
93 2pvf_A Fibroblast growth facto 100.0 5.8E-29 2E-33 232.8 12.9 159 199-360 34-228 (334)
94 3cok_A Serine/threonine-protei 100.0 6.8E-29 2.3E-33 226.0 12.8 157 199-360 10-181 (278)
95 1qcf_A Haematopoetic cell kina 100.0 1.3E-29 4.6E-34 247.2 8.6 157 199-360 187-354 (454)
96 4e5w_A Tyrosine-protein kinase 100.0 6.1E-29 2.1E-33 228.8 12.4 157 201-360 22-198 (302)
97 2w4o_A Calcium/calmodulin-depe 100.0 3.8E-29 1.3E-33 235.9 11.0 155 199-360 52-219 (349)
98 1mp8_A Focal adhesion kinase 1 100.0 3.5E-29 1.2E-33 228.4 10.0 156 200-360 15-186 (281)
99 3t9t_A Tyrosine-protein kinase 100.0 2.7E-29 9.3E-34 227.0 9.1 157 200-360 8-174 (267)
100 3kn6_A Ribosomal protein S6 ki 100.0 1.3E-28 4.5E-33 229.9 14.0 150 205-360 16-178 (325)
101 3ork_A Serine/threonine protei 100.0 1.4E-29 4.9E-34 234.6 7.4 158 199-360 11-188 (311)
102 1vzo_A Ribosomal protein S6 ki 100.0 2.4E-29 8E-34 237.8 8.8 157 199-360 53-229 (355)
103 2qr7_A Ribosomal protein S6 ki 100.0 6.1E-29 2.1E-33 233.8 11.6 156 199-360 21-189 (342)
104 3gni_B Strad alpha; kinase fol 100.0 8E-29 2.7E-33 236.8 12.4 159 199-360 24-204 (389)
105 1u5q_A Serine/threonine protei 100.0 5.9E-29 2E-33 234.5 11.3 150 201-360 55-219 (348)
106 3n9x_A Phosphotransferase; mal 100.0 7.4E-29 2.5E-33 240.5 12.1 157 199-360 25-220 (432)
107 1ua2_A CAK, cell division prot 100.0 6.3E-29 2.2E-33 233.9 11.3 157 198-360 8-181 (346)
108 3mtl_A Cell division protein k 100.0 4.3E-29 1.5E-33 232.9 9.9 155 200-360 2-169 (324)
109 3dbq_A Dual specificity protei 100.0 5.4E-29 1.9E-33 234.0 10.7 155 200-360 9-178 (343)
110 3op5_A Serine/threonine-protei 100.0 3.7E-29 1.3E-33 237.1 9.5 158 199-360 34-230 (364)
111 3qup_A Tyrosine-protein kinase 100.0 4.3E-29 1.5E-33 232.3 9.9 159 199-360 22-208 (323)
112 1csn_A Casein kinase-1; phosph 100.0 2.7E-28 9.4E-33 223.9 14.8 158 199-360 9-187 (298)
113 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.4E-29 1.2E-33 244.2 9.1 157 199-360 183-350 (452)
114 2zmd_A Dual specificity protei 100.0 1.1E-28 3.6E-33 236.3 12.2 154 201-360 57-225 (390)
115 3is5_A Calcium-dependent prote 100.0 7.3E-29 2.5E-33 227.0 10.6 155 200-360 22-195 (285)
116 3og7_A AKAP9-BRAF fusion prote 100.0 6E-29 2E-33 228.0 10.1 156 199-360 23-191 (289)
117 1p4o_A Insulin-like growth fac 100.0 4.6E-29 1.6E-33 231.9 9.4 160 198-360 23-209 (322)
118 1nxk_A MAP kinase-activated pr 100.0 7.7E-29 2.6E-33 238.1 11.2 155 200-360 61-232 (400)
119 4f0f_A Serine/threonine-protei 100.0 3.1E-28 1.1E-32 222.6 14.7 152 199-360 18-195 (287)
120 3fdn_A Serine/threonine-protei 100.0 1.3E-28 4.5E-33 224.3 12.1 154 199-360 8-176 (279)
121 3g2f_A Bone morphogenetic prot 100.0 1.2E-28 4E-33 230.5 12.0 156 199-360 12-197 (336)
122 2eue_A Carbon catabolite derep 100.0 2E-28 6.7E-33 222.7 13.2 154 199-360 12-180 (275)
123 3g33_A Cell division protein k 100.0 2.7E-28 9.2E-33 225.5 14.3 156 198-360 7-188 (308)
124 3i6u_A CDS1, serine/threonine- 100.0 8.7E-29 3E-33 239.1 11.4 155 198-360 133-310 (419)
125 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-28 5.2E-33 223.5 12.4 154 200-360 9-177 (277)
126 3pg1_A Mitogen-activated prote 100.0 1.2E-28 4.1E-33 233.0 11.8 163 191-360 13-202 (362)
127 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-28 4.6E-33 239.9 12.4 153 199-360 192-355 (450)
128 4eut_A Serine/threonine-protei 100.0 6.6E-29 2.2E-33 238.1 10.0 155 200-360 9-184 (396)
129 4fvq_A Tyrosine-protein kinase 100.0 2.9E-29 1E-33 229.5 7.3 152 200-360 8-186 (289)
130 3oz6_A Mitogen-activated prote 100.0 1.4E-28 4.8E-33 235.1 11.9 157 198-360 7-199 (388)
131 3kfa_A Tyrosine-protein kinase 100.0 8.9E-29 3.1E-33 226.2 10.0 158 199-360 12-181 (288)
132 3eb0_A Putative uncharacterize 100.0 2E-28 6.9E-33 233.6 12.9 157 197-360 4-210 (383)
133 4agu_A Cyclin-dependent kinase 100.0 1.7E-28 5.9E-33 226.9 12.0 155 200-360 3-171 (311)
134 3mdy_A Bone morphogenetic prot 100.0 2.7E-28 9.2E-33 227.9 13.3 157 198-360 35-215 (337)
135 2xir_A Vascular endothelial gr 100.0 6.6E-29 2.3E-33 229.9 9.1 167 191-360 18-219 (316)
136 2a19_B Interferon-induced, dou 100.0 1.5E-28 5.3E-33 223.9 11.3 155 200-360 11-190 (284)
137 2vuw_A Serine/threonine-protei 100.0 3.8E-30 1.3E-34 241.1 0.7 149 200-360 20-246 (336)
138 3lzb_A Epidermal growth factor 100.0 6.6E-29 2.3E-33 232.1 8.9 158 199-360 14-188 (327)
139 3hko_A Calcium/calmodulin-depe 100.0 1.1E-28 3.7E-33 231.5 10.4 162 196-360 22-243 (345)
140 3mi9_A Cell division protein k 100.0 2.7E-28 9.1E-33 229.8 12.9 158 199-360 16-197 (351)
141 3lxl_A Tyrosine-protein kinase 100.0 1.9E-28 6.5E-33 228.5 11.8 158 200-360 23-199 (327)
142 2i1m_A Macrophage colony-stimu 100.0 7.1E-29 2.4E-33 231.8 8.9 159 199-360 45-235 (333)
143 3f66_A Hepatocyte growth facto 100.0 1.5E-28 5E-33 226.0 10.8 158 200-360 25-201 (298)
144 3llt_A Serine/threonine kinase 100.0 1E-28 3.4E-33 233.4 9.9 162 190-360 25-228 (360)
145 3kk8_A Calcium/calmodulin depe 100.0 3.4E-28 1.2E-32 221.9 13.1 155 199-360 5-176 (284)
146 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-28 6.9E-33 223.1 11.5 153 199-360 10-199 (289)
147 2yex_A Serine/threonine-protei 100.0 1.8E-28 6.2E-33 222.6 11.0 158 199-360 6-176 (276)
148 2a2a_A Death-associated protei 100.0 2.3E-28 7.9E-33 227.5 12.0 154 200-360 12-187 (321)
149 1qpc_A LCK kinase; alpha beta 100.0 1.7E-28 5.9E-33 223.4 10.8 156 200-360 13-179 (279)
150 3gxj_A TGF-beta receptor type- 100.0 3.8E-29 1.3E-33 230.0 6.2 158 200-360 3-181 (303)
151 3lij_A Calcium/calmodulin depe 100.0 3.5E-28 1.2E-32 239.7 13.4 154 200-360 37-207 (494)
152 1zy4_A Serine/threonine-protei 100.0 1.9E-28 6.4E-33 225.0 10.8 159 199-360 5-199 (303)
153 1mqb_A Ephrin type-A receptor 100.0 2.4E-28 8E-33 228.8 11.6 158 200-360 44-219 (333)
154 3kmu_A ILK, integrin-linked ki 100.0 3.4E-28 1.2E-32 219.9 12.3 150 200-360 10-177 (271)
155 3c1x_A Hepatocyte growth facto 100.0 1.1E-28 3.7E-33 234.9 9.2 156 202-360 91-265 (373)
156 3q5i_A Protein kinase; CDPK, m 100.0 4.1E-28 1.4E-32 239.7 13.7 155 199-360 35-217 (504)
157 3mwu_A Calmodulin-domain prote 100.0 3.5E-28 1.2E-32 239.2 13.1 154 200-360 22-192 (486)
158 2y7j_A Phosphorylase B kinase 100.0 3.6E-28 1.2E-32 230.5 12.7 157 197-360 91-268 (365)
159 2rku_A Serine/threonine-protei 100.0 5.1E-28 1.8E-32 222.0 12.9 155 200-360 15-184 (294)
160 3nyv_A Calmodulin-domain prote 99.9 1.8E-28 6E-33 241.1 10.2 154 200-360 26-197 (484)
161 2owb_A Serine/threonine-protei 99.9 4.9E-28 1.7E-32 226.7 12.6 156 199-360 40-210 (335)
162 3dtc_A Mitogen-activated prote 99.9 3.1E-28 1.1E-32 220.6 10.8 151 200-360 7-183 (271)
163 2vwi_A Serine/threonine-protei 99.9 2.6E-28 8.8E-33 224.5 10.4 160 198-360 13-195 (303)
164 2ac3_A MAP kinase-interacting 99.9 6.5E-28 2.2E-32 223.5 13.1 157 200-360 12-190 (316)
165 3ttj_A Mitogen-activated prote 99.9 2.7E-28 9.3E-33 238.6 10.9 152 199-360 61-232 (464)
166 2yfx_A Tyrosine-protein kinase 99.9 2.6E-28 8.8E-33 227.7 10.2 159 199-360 29-214 (327)
167 2vgo_A Serine/threonine-protei 99.9 6.7E-28 2.3E-32 220.2 12.7 154 199-360 13-181 (284)
168 3pls_A Macrophage-stimulating 99.9 2.4E-28 8.2E-33 224.3 9.8 156 202-360 23-197 (298)
169 2ozo_A Tyrosine-protein kinase 99.9 3.3E-28 1.1E-32 245.8 11.6 150 207-360 343-508 (613)
170 2h8h_A Proto-oncogene tyrosine 99.9 7.6E-29 2.6E-33 246.7 6.8 157 199-360 266-433 (535)
171 2h6d_A 5'-AMP-activated protei 99.9 6.8E-28 2.3E-32 219.0 12.5 155 199-360 10-179 (276)
172 3com_A Serine/threonine-protei 99.9 6E-28 2E-32 223.6 12.4 158 198-360 27-194 (314)
173 2eva_A TAK1 kinase - TAB1 chim 99.9 5.1E-28 1.7E-32 223.9 11.8 153 200-360 8-172 (307)
174 3brb_A Proto-oncogene tyrosine 99.9 4.5E-28 1.5E-32 224.4 11.4 160 198-360 32-218 (313)
175 3cc6_A Protein tyrosine kinase 99.9 4E-28 1.4E-32 221.4 10.6 157 199-360 11-183 (281)
176 2h34_A Serine/threonine-protei 99.9 5.9E-28 2E-32 223.6 11.8 157 199-360 33-204 (309)
177 2wtk_C Serine/threonine-protei 99.9 1.9E-27 6.5E-32 219.1 15.2 158 199-360 4-180 (305)
178 3eqc_A Dual specificity mitoge 99.9 2.8E-28 9.4E-33 230.5 9.7 153 200-360 33-199 (360)
179 3bhy_A Death-associated protei 99.9 6.4E-28 2.2E-32 220.0 11.8 154 200-360 5-180 (283)
180 1u59_A Tyrosine-protein kinase 99.9 6.6E-28 2.3E-32 220.7 11.9 156 201-360 10-182 (287)
181 3lxp_A Non-receptor tyrosine-p 99.9 1.2E-27 4E-32 222.5 13.8 154 202-360 33-206 (318)
182 3gbz_A Kinase, CMGC CDK; ssgci 99.9 3.6E-28 1.2E-32 227.1 10.3 156 198-360 32-206 (329)
183 2w1i_A JAK2; chromosomal rearr 99.9 8.2E-28 2.8E-32 224.3 12.4 158 200-360 41-217 (326)
184 1cm8_A Phosphorylated MAP kina 99.9 4.5E-28 1.6E-32 230.0 10.8 151 199-360 24-194 (367)
185 4azs_A Methyltransferase WBDD; 99.9 1.1E-28 3.9E-33 246.7 6.8 144 208-360 242-408 (569)
186 4aaa_A Cyclin-dependent kinase 99.9 5.9E-28 2E-32 225.7 11.1 156 199-360 24-193 (331)
187 2clq_A Mitogen-activated prote 99.9 2.3E-27 7.8E-32 217.4 14.6 155 201-360 23-192 (295)
188 2j7t_A Serine/threonine-protei 99.9 2.7E-28 9.3E-33 224.5 8.5 157 199-360 18-186 (302)
189 1fvr_A Tyrosine-protein kinase 99.9 7E-28 2.4E-32 224.7 11.3 155 200-360 25-210 (327)
190 1phk_A Phosphorylase kinase; g 99.9 1.2E-27 4.2E-32 219.7 12.7 156 198-360 15-192 (298)
191 4e7w_A Glycogen synthase kinas 99.9 4.5E-28 1.5E-32 232.2 10.1 155 200-360 40-210 (394)
192 1j1b_A Glycogen synthase kinas 99.9 7.2E-28 2.5E-32 232.7 11.6 154 200-360 54-225 (420)
193 1t4h_A Serine/threonine-protei 99.9 2.1E-27 7.1E-32 217.6 13.9 151 202-360 28-199 (290)
194 3nsz_A CK II alpha, casein kin 99.9 1.4E-27 4.7E-32 222.7 12.7 151 200-360 36-199 (330)
195 1b6c_B TGF-B superfamily recep 99.9 2.7E-27 9.2E-32 221.7 14.3 160 198-360 40-220 (342)
196 3a7i_A MST3 kinase, serine/thr 99.9 2E-27 6.9E-32 219.0 13.2 154 200-360 22-188 (303)
197 2ycf_A Serine/threonine-protei 99.9 5.1E-28 1.7E-32 225.2 9.3 153 200-360 10-185 (322)
198 2wqm_A Serine/threonine-protei 99.9 1.7E-27 5.7E-32 220.3 12.4 157 199-360 31-205 (310)
199 2r3i_A Cell division protein k 99.9 1.4E-27 4.9E-32 219.4 11.8 155 200-360 3-172 (299)
200 3fme_A Dual specificity mitoge 99.9 7.3E-28 2.5E-32 220.2 9.7 155 199-360 6-178 (290)
201 2v62_A Serine/threonine-protei 99.9 4.1E-28 1.4E-32 228.2 8.3 156 200-360 37-229 (345)
202 2pml_X PFPK7, Ser/Thr protein 99.9 1.3E-27 4.4E-32 224.5 11.3 154 199-360 30-219 (348)
203 4hgt_A Casein kinase I isoform 99.9 2.4E-27 8.3E-32 217.2 12.5 159 198-360 7-184 (296)
204 2jam_A Calcium/calmodulin-depe 99.9 1.3E-27 4.4E-32 220.6 10.4 153 200-360 9-176 (304)
205 2x7f_A TRAF2 and NCK-interacti 99.9 3.8E-28 1.3E-32 226.1 6.8 159 197-360 21-198 (326)
206 3byv_A Rhoptry kinase; malaria 99.9 2E-28 6.9E-33 233.1 5.1 151 200-360 73-271 (377)
207 2j0j_A Focal adhesion kinase 1 99.9 1.4E-27 5E-32 242.6 11.6 157 199-360 389-561 (656)
208 3an0_A Dual specificity mitoge 99.9 7.8E-28 2.7E-32 225.5 8.8 155 199-360 50-222 (340)
209 2buj_A Serine/threonine-protei 99.9 9E-28 3.1E-32 222.7 8.8 159 199-360 28-212 (317)
210 2w5a_A Serine/threonine-protei 99.9 5.1E-28 1.7E-32 220.1 7.0 157 199-360 5-185 (279)
211 2pzi_A Probable serine/threoni 99.9 1.1E-27 3.8E-32 244.9 10.0 148 200-360 80-246 (681)
212 2xrw_A Mitogen-activated prote 99.9 2.8E-27 9.4E-32 224.9 11.8 152 199-360 24-195 (371)
213 4fl3_A Tyrosine-protein kinase 99.9 1.7E-27 5.9E-32 241.3 11.0 150 206-360 375-541 (635)
214 3rgf_A Cyclin-dependent kinase 99.9 2.4E-27 8.3E-32 227.8 11.3 155 202-360 22-204 (405)
215 1u46_A ACK-1, activated CDC42 99.9 2.1E-27 7.1E-32 217.3 10.4 157 200-360 18-193 (291)
216 2jii_A Serine/threonine-protei 99.9 4.1E-28 1.4E-32 228.7 5.7 157 200-360 42-237 (352)
217 3sv0_A Casein kinase I-like; t 99.9 7.5E-27 2.6E-31 229.1 14.6 158 199-360 6-182 (483)
218 3lm5_A Serine/threonine-protei 99.9 4.8E-27 1.7E-31 219.3 12.5 156 199-360 27-202 (327)
219 3qyz_A Mitogen-activated prote 99.9 2.7E-27 9.1E-32 224.3 10.7 156 199-360 26-200 (364)
220 3p23_A Serine/threonine-protei 99.9 1.9E-27 6.7E-32 230.5 9.5 157 200-360 24-195 (432)
221 2b9h_A MAP kinase FUS3, mitoge 99.9 4.5E-27 1.5E-31 221.2 11.7 156 199-360 10-191 (353)
222 3uzp_A CKI-delta, CKID, casein 99.9 5.6E-27 1.9E-31 215.0 11.9 158 199-360 8-184 (296)
223 1byg_A CSK, protein (C-termina 99.9 1.4E-27 4.9E-32 217.3 7.7 153 199-360 20-183 (278)
224 3ll6_A Cyclin G-associated kin 99.9 5.7E-27 1.9E-31 218.5 11.5 157 200-360 28-219 (337)
225 3q60_A ROP5B; pseudokinase, tr 99.9 1.8E-27 6E-32 226.1 8.0 150 201-360 63-260 (371)
226 1xbb_A Tyrosine-protein kinase 99.9 5.8E-27 2E-31 214.8 11.2 156 200-360 16-189 (291)
227 3e3p_A Protein kinase, putativ 99.9 9.4E-27 3.2E-31 219.6 12.8 163 193-360 16-200 (360)
228 2fst_X Mitogen-activated prote 99.9 1.6E-27 5.6E-32 226.2 7.7 151 199-360 28-198 (367)
229 3kvw_A DYRK2, dual specificity 99.9 7.7E-27 2.6E-31 226.1 12.2 152 200-360 97-268 (429)
230 1blx_A Cyclin-dependent kinase 99.9 6.4E-27 2.2E-31 217.6 10.8 156 198-360 9-188 (326)
231 2y4i_B KSR2, HKSR2, kinase sup 99.9 2E-27 7E-32 220.3 7.1 156 199-360 32-203 (319)
232 2i6l_A Mitogen-activated prote 99.9 1.3E-26 4.3E-31 214.7 12.1 155 200-360 11-193 (320)
233 3cek_A Dual specificity protei 99.9 5.5E-27 1.9E-31 217.2 9.6 156 199-360 27-197 (313)
234 3fhr_A MAP kinase-activated pr 99.9 8.3E-27 2.8E-31 218.6 10.9 155 199-360 27-198 (336)
235 1wak_A Serine/threonine-protei 99.9 5.2E-27 1.8E-31 223.9 9.6 152 200-360 37-262 (397)
236 4exu_A Mitogen-activated prote 99.9 5.7E-27 1.9E-31 222.7 9.5 150 199-360 41-210 (371)
237 2rio_A Serine/threonine-protei 99.9 9.5E-27 3.3E-31 225.8 10.3 155 202-360 17-201 (434)
238 1z57_A Dual specificity protei 99.9 1.7E-26 5.7E-31 215.4 11.0 152 200-360 14-203 (339)
239 2wei_A Calmodulin-domain prote 99.9 1.8E-26 6.1E-31 211.1 10.9 155 199-360 21-192 (287)
240 3a99_A Proto-oncogene serine/t 99.9 1.5E-26 5.2E-31 215.2 10.5 155 198-360 41-217 (320)
241 3aln_A Dual specificity mitoge 99.9 2.3E-26 7.9E-31 214.3 11.7 155 199-360 21-194 (327)
242 2iwi_A Serine/threonine-protei 99.9 9.3E-27 3.2E-31 215.4 8.9 156 197-360 28-207 (312)
243 3coi_A Mitogen-activated prote 99.9 1.1E-26 3.7E-31 219.0 8.4 150 199-360 23-192 (353)
244 2dyl_A Dual specificity mitoge 99.9 2.2E-26 7.5E-31 213.1 9.7 155 199-360 24-193 (318)
245 3qa8_A MGC80376 protein; kinas 99.9 2.8E-26 9.6E-31 231.1 10.1 155 200-360 14-192 (676)
246 2vx3_A Dual specificity tyrosi 99.9 8.7E-26 3E-30 215.3 12.5 155 199-360 53-227 (382)
247 2eu9_A Dual specificity protei 99.9 8.2E-26 2.8E-30 212.2 11.0 152 200-360 19-208 (355)
248 3en9_A Glycoprotease, O-sialog 99.9 8E-27 2.7E-31 232.0 3.4 142 204-360 340-505 (540)
249 1q8y_A SR protein kinase; tran 99.9 5.3E-26 1.8E-30 215.4 7.5 152 200-360 19-204 (373)
250 3uqc_A Probable conserved tran 99.9 3.1E-25 1.1E-29 203.3 11.5 132 200-337 31-177 (286)
251 3m2w_A MAP kinase-activated pr 99.9 3.4E-25 1.2E-29 204.0 11.7 140 200-342 17-173 (299)
252 3dzo_A Rhoptry kinase domain; 99.9 2.5E-24 8.5E-29 207.4 6.9 150 201-360 79-276 (413)
253 1zar_A RIO2 kinase; serine kin 99.9 4.9E-23 1.7E-27 188.4 10.4 132 194-341 84-244 (282)
254 3rgz_A Protein brassinosteroid 99.9 1.1E-21 3.8E-26 203.2 11.8 149 2-153 513-751 (768)
255 1zth_A RIO1 serine protein kin 99.8 1.2E-20 4.2E-25 170.1 6.9 128 202-341 49-221 (258)
256 1ogq_A PGIP-2, polygalacturona 99.8 1.5E-18 5.1E-23 160.8 10.0 142 2-144 148-309 (313)
257 4gyi_A RIO2 kinase; protein ki 99.7 1.2E-17 4.1E-22 157.7 6.4 130 195-338 90-264 (397)
258 3m19_A Variable lymphocyte rec 99.7 2.3E-16 7.8E-21 141.3 13.0 110 3-112 35-153 (251)
259 3e6j_A Variable lymphocyte rec 99.7 2.1E-16 7.1E-21 139.8 12.4 126 3-141 40-174 (229)
260 2v9t_B SLIT homolog 2 protein 99.7 1.5E-16 5.3E-21 139.7 11.3 127 3-141 32-167 (220)
261 2v70_A SLIT-2, SLIT homolog 2 99.7 1.7E-16 5.9E-21 139.4 11.1 127 3-141 32-168 (220)
262 3rgz_A Protein brassinosteroid 99.7 1.4E-16 4.9E-21 164.8 10.3 48 66-113 632-679 (768)
263 3oja_A Leucine-rich immune mol 99.7 8.8E-18 3E-22 165.0 0.3 30 229-258 323-352 (487)
264 2v70_A SLIT-2, SLIT homolog 2 99.6 4E-16 1.4E-20 137.1 10.2 107 2-108 56-171 (220)
265 3rfs_A Internalin B, repeat mo 99.6 1.1E-15 3.6E-20 138.6 13.2 138 2-141 62-220 (272)
266 1w8a_A SLIT protein; signaling 99.6 1.1E-15 3.6E-20 131.4 12.4 105 4-108 30-144 (192)
267 2o6s_A Variable lymphocyte rec 99.6 2.1E-15 7.2E-20 130.9 13.2 110 3-112 28-146 (208)
268 1ogq_A PGIP-2, polygalacturona 99.6 3.6E-16 1.2E-20 144.7 7.6 113 2-114 75-198 (313)
269 4fcg_A Uncharacterized protein 99.6 7.3E-16 2.5E-20 143.6 9.6 109 2-111 149-274 (328)
270 2o6s_A Variable lymphocyte rec 99.6 3E-15 1E-19 129.9 11.9 121 2-122 51-184 (208)
271 2v9t_B SLIT homolog 2 protein 99.6 1.7E-15 5.7E-20 133.1 10.2 106 2-107 55-169 (220)
272 2o6q_A Variable lymphocyte rec 99.6 6.8E-15 2.3E-19 133.1 14.1 106 4-109 38-152 (270)
273 1w8a_A SLIT protein; signaling 99.6 3.2E-15 1.1E-19 128.4 11.2 120 6-140 11-140 (192)
274 3rfs_A Internalin B, repeat mo 99.6 3.7E-15 1.3E-19 135.0 11.9 111 2-112 84-203 (272)
275 3m19_A Variable lymphocyte rec 99.6 8.1E-15 2.8E-19 131.1 13.7 128 2-141 58-194 (251)
276 1ozn_A Reticulon 4 receptor; N 99.6 3.1E-15 1.1E-19 136.3 11.1 112 2-113 79-200 (285)
277 2je0_A Acidic leucine-rich nuc 99.6 1.3E-15 4.5E-20 125.1 7.4 106 2-107 16-130 (149)
278 2o6r_A Variable lymphocyte rec 99.6 4.2E-15 1.4E-19 125.7 10.7 105 3-107 28-141 (177)
279 1p9a_G Platelet glycoprotein I 99.6 1.3E-14 4.6E-19 132.7 13.4 107 3-110 31-144 (290)
280 2wfh_A SLIT homolog 2 protein 99.6 7.9E-15 2.7E-19 126.1 10.0 121 6-141 13-141 (193)
281 2xot_A Amphoterin-induced prot 99.6 3.9E-15 1.3E-19 140.5 8.7 106 4-109 40-155 (361)
282 3e6j_A Variable lymphocyte rec 99.6 1.2E-14 4E-19 128.4 11.2 106 1-107 62-176 (229)
283 3v47_A TOLL-like receptor 5B a 99.6 9.6E-15 3.3E-19 141.5 11.5 129 3-143 275-412 (455)
284 2ell_A Acidic leucine-rich nuc 99.6 7.2E-15 2.5E-19 123.1 9.0 106 2-107 23-137 (168)
285 2wfh_A SLIT homolog 2 protein 99.6 2.1E-14 7.1E-19 123.5 11.5 104 3-107 31-143 (193)
286 1ozn_A Reticulon 4 receptor; N 99.5 2.9E-14 1E-18 129.7 12.8 109 3-111 32-150 (285)
287 4fcg_A Uncharacterized protein 99.5 1E-14 3.5E-19 135.8 9.9 109 2-113 126-252 (328)
288 4g8a_A TOLL-like receptor 4; l 99.5 1.2E-14 4.1E-19 146.1 10.4 108 4-111 53-170 (635)
289 2z66_A Variable lymphocyte rec 99.5 2E-14 6.9E-19 132.1 10.7 110 2-111 100-220 (306)
290 4b8c_D Glucose-repressible alc 99.5 1.1E-14 3.9E-19 149.5 9.9 108 2-112 223-338 (727)
291 4g8a_A TOLL-like receptor 4; l 99.5 2.3E-14 8E-19 144.0 11.5 129 2-141 444-582 (635)
292 2o6q_A Variable lymphocyte rec 99.5 3.9E-14 1.3E-18 128.0 11.8 111 2-112 60-179 (270)
293 1p9a_G Platelet glycoprotein I 99.5 4.4E-14 1.5E-18 129.2 12.1 109 2-112 54-170 (290)
294 2z62_A TOLL-like receptor 4, v 99.5 3.4E-14 1.2E-18 128.7 10.9 111 2-112 51-171 (276)
295 3g39_A Variable lymphocyte rec 99.5 4.5E-14 1.5E-18 118.8 10.5 100 5-107 11-119 (170)
296 2z62_A TOLL-like receptor 4, v 99.5 3.5E-14 1.2E-18 128.6 10.4 111 3-113 28-148 (276)
297 3zyj_A Leucine-rich repeat-con 99.5 3.7E-14 1.3E-18 137.2 11.0 138 2-141 135-294 (440)
298 3v47_A TOLL-like receptor 5B a 99.5 3.3E-14 1.1E-18 137.7 10.2 106 2-107 298-412 (455)
299 3vq2_A TLR4, TOLL-like recepto 99.5 4E-14 1.4E-18 142.2 10.8 141 2-142 398-561 (606)
300 3zyi_A Leucine-rich repeat-con 99.5 5.4E-14 1.8E-18 136.6 11.0 108 2-111 146-263 (452)
301 2xot_A Amphoterin-induced prot 99.5 5.7E-14 1.9E-18 132.5 10.7 130 2-141 63-204 (361)
302 3t6q_A CD180 antigen; protein- 99.5 4.4E-14 1.5E-18 141.9 10.2 112 2-113 399-523 (606)
303 1ziw_A TOLL-like receptor 3; i 99.5 1E-13 3.6E-18 141.1 12.3 129 3-142 480-625 (680)
304 1dce_A Protein (RAB geranylger 99.5 6.2E-14 2.1E-18 139.9 10.2 101 4-108 442-551 (567)
305 3vq2_A TLR4, TOLL-like recepto 99.5 8.4E-14 2.9E-18 139.9 10.8 106 3-108 56-171 (606)
306 2r9u_A Variable lymphocyte rec 99.5 1.6E-13 5.6E-18 115.9 10.6 100 5-107 14-122 (174)
307 4eco_A Uncharacterized protein 99.5 3.4E-14 1.2E-18 144.0 7.2 109 4-112 82-297 (636)
308 2o6r_A Variable lymphocyte rec 99.5 3.2E-13 1.1E-17 114.1 12.0 121 5-140 9-138 (177)
309 2id5_A Lingo-1, leucine rich r 99.5 1E-13 3.6E-18 135.3 9.5 107 2-108 55-170 (477)
310 1wwl_A Monocyte differentiatio 99.5 8.1E-14 2.8E-18 128.7 8.0 103 2-104 94-215 (312)
311 2z63_A TOLL-like receptor 4, v 99.5 1.5E-13 5E-18 136.8 10.3 139 2-141 372-533 (570)
312 2z66_A Variable lymphocyte rec 99.4 1.6E-13 5.4E-18 126.1 9.1 111 2-113 77-198 (306)
313 3oja_B Anopheles plasmodium-re 99.4 3.1E-13 1E-17 135.9 11.4 110 2-111 74-192 (597)
314 4ezg_A Putative uncharacterize 99.4 1.7E-13 5.9E-18 117.9 7.9 104 2-107 43-153 (197)
315 2z7x_B TOLL-like receptor 1, v 99.4 6.4E-13 2.2E-17 131.0 13.0 107 2-111 323-441 (520)
316 4eco_A Uncharacterized protein 99.4 6.5E-14 2.2E-18 141.9 5.9 108 2-112 248-374 (636)
317 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 9.6E-13 3.3E-17 131.2 13.5 104 2-108 352-467 (562)
318 1xku_A Decorin; proteoglycan, 99.4 8.8E-13 3E-17 122.5 12.1 108 2-110 144-259 (330)
319 2z63_A TOLL-like receptor 4, v 99.4 3.9E-13 1.3E-17 133.7 10.4 107 3-109 52-168 (570)
320 4ecn_A Leucine-rich repeat pro 99.4 8E-14 2.7E-18 145.2 5.3 104 2-107 447-589 (876)
321 2z80_A TOLL-like receptor 2, v 99.4 2.2E-13 7.6E-18 127.8 7.8 110 3-113 52-173 (353)
322 4ezg_A Putative uncharacterize 99.4 4.4E-13 1.5E-17 115.3 9.0 102 2-106 65-175 (197)
323 2id5_A Lingo-1, leucine rich r 99.4 3.3E-13 1.1E-17 131.7 9.2 111 3-113 32-151 (477)
324 3oja_B Anopheles plasmodium-re 99.4 9.5E-13 3.3E-17 132.3 12.5 81 1-81 97-186 (597)
325 3o6n_A APL1; leucine-rich repe 99.4 8.9E-13 3E-17 125.3 11.4 104 2-105 68-180 (390)
326 1ziw_A TOLL-like receptor 3; i 99.4 4E-13 1.4E-17 136.8 9.6 106 3-108 49-163 (680)
327 2z81_A CD282 antigen, TOLL-lik 99.4 3.8E-13 1.3E-17 133.4 9.2 105 3-107 26-140 (549)
328 1a9n_A U2A', U2A'; complex (nu 99.4 4.4E-13 1.5E-17 113.2 8.1 101 2-105 18-128 (176)
329 4glp_A Monocyte differentiatio 99.4 3E-13 1E-17 124.7 7.8 102 2-104 144-265 (310)
330 1xku_A Decorin; proteoglycan, 99.4 1.1E-12 3.7E-17 121.9 11.2 103 2-104 75-185 (330)
331 2ft3_A Biglycan; proteoglycan, 99.4 1.6E-12 5.3E-17 120.9 12.3 107 3-110 123-260 (332)
332 2ell_A Acidic leucine-rich nuc 99.4 3.9E-13 1.3E-17 112.5 7.4 102 2-105 48-162 (168)
333 2z81_A CD282 antigen, TOLL-lik 99.4 2.8E-13 9.5E-18 134.4 7.6 113 1-113 48-171 (549)
334 1wwl_A Monocyte differentiatio 99.4 4.2E-13 1.4E-17 123.9 8.2 101 3-103 149-266 (312)
335 3zyi_A Leucine-rich repeat-con 99.4 1.2E-12 4.2E-17 127.0 11.7 105 3-107 75-188 (452)
336 2xwt_C Thyrotropin receptor; s 99.4 3E-13 1E-17 119.8 6.5 108 3-112 31-153 (239)
337 2je0_A Acidic leucine-rich nuc 99.4 4.2E-13 1.4E-17 109.9 6.8 97 1-99 40-149 (149)
338 3oja_A Leucine-rich immune mol 99.4 2.3E-13 7.8E-18 133.5 6.0 104 2-109 119-232 (487)
339 2ft3_A Biglycan; proteoglycan, 99.4 2.4E-12 8.1E-17 119.7 12.4 98 3-103 54-160 (332)
340 2z80_A TOLL-like receptor 2, v 99.4 8.4E-13 2.9E-17 123.8 9.3 107 3-109 76-193 (353)
341 4glp_A Monocyte differentiatio 99.4 8.8E-13 3E-17 121.6 9.0 102 1-105 167-287 (310)
342 3t6q_A CD180 antigen; protein- 99.4 8.9E-13 3E-17 132.4 9.8 102 4-105 34-144 (606)
343 3o53_A Protein LRIM1, AGAP0063 99.4 3.1E-13 1.1E-17 125.1 5.9 100 2-104 119-228 (317)
344 2xwt_C Thyrotropin receptor; s 99.4 6E-13 2.1E-17 117.9 7.5 104 2-107 54-173 (239)
345 3zyj_A Leucine-rich repeat-con 99.4 2E-12 7E-17 124.9 11.9 105 3-107 64-177 (440)
346 3j0a_A TOLL-like receptor 5; m 99.4 9.1E-13 3.1E-17 137.7 9.5 108 3-110 48-168 (844)
347 1xeu_A Internalin C; cellular 99.4 1.8E-12 6.2E-17 116.8 9.9 96 3-105 41-143 (263)
348 3o53_A Protein LRIM1, AGAP0063 99.4 7.9E-13 2.7E-17 122.3 7.7 101 3-108 99-209 (317)
349 4b8c_D Glucose-repressible alc 99.4 6.9E-14 2.4E-18 143.6 0.0 113 2-116 246-367 (727)
350 3j0a_A TOLL-like receptor 5; m 99.4 1.4E-12 4.8E-17 136.3 9.9 112 2-113 23-147 (844)
351 2z7x_B TOLL-like receptor 1, v 99.4 7.8E-13 2.7E-17 130.4 7.5 100 3-105 21-130 (520)
352 3tm0_A Aminoglycoside 3'-phosp 99.3 2.2E-12 7.6E-17 115.7 9.7 135 197-338 11-213 (263)
353 4ecn_A Leucine-rich repeat pro 99.3 9.4E-13 3.2E-17 137.1 8.1 107 2-112 490-616 (876)
354 1h6t_A Internalin B; cell adhe 99.3 3E-12 1E-16 117.0 9.7 100 2-107 67-173 (291)
355 3g39_A Variable lymphocyte rec 99.3 4E-12 1.4E-16 106.8 9.7 102 28-141 10-117 (170)
356 2ifg_A High affinity nerve gro 99.3 2.3E-12 7.8E-17 120.5 9.1 99 6-107 11-120 (347)
357 3o6n_A APL1; leucine-rich repe 99.3 1.6E-12 5.4E-17 123.6 7.8 112 2-113 44-164 (390)
358 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 1.7E-12 5.8E-17 129.4 8.0 100 3-105 52-161 (562)
359 4fmz_A Internalin; leucine ric 99.3 4.5E-12 1.5E-16 118.3 9.5 104 2-111 198-308 (347)
360 1a9n_A U2A', U2A'; complex (nu 99.3 1.7E-12 5.9E-17 109.5 6.1 98 3-104 42-154 (176)
361 1h6t_A Internalin B; cell adhe 99.3 6.6E-12 2.3E-16 114.8 10.0 99 1-105 88-193 (291)
362 3cvr_A Invasion plasmid antige 99.3 3E-12 1E-16 127.6 8.3 104 2-114 139-254 (571)
363 1m9s_A Internalin B; cell inva 99.3 5.8E-12 2E-16 126.6 10.4 100 2-107 64-170 (605)
364 1h6u_A Internalin H; cell adhe 99.3 6.3E-12 2.1E-16 115.8 9.4 98 2-105 62-166 (308)
365 1h6u_A Internalin H; cell adhe 99.3 8.2E-12 2.8E-16 115.1 9.6 101 1-107 83-190 (308)
366 2r9u_A Variable lymphocyte rec 99.3 1.2E-11 4E-16 104.4 9.7 101 29-141 14-120 (174)
367 1ds9_A Outer arm dynein; leuci 99.3 8.1E-14 2.8E-18 120.0 -4.0 101 3-107 48-157 (198)
368 1nd4_A Aminoglycoside 3'-phosp 99.3 7.5E-12 2.6E-16 111.6 8.7 122 209-339 29-215 (264)
369 1m9s_A Internalin B; cell inva 99.3 1.5E-11 5.2E-16 123.5 10.8 98 2-105 86-190 (605)
370 4fmz_A Internalin; leucine ric 99.3 6.7E-12 2.3E-16 117.1 7.7 102 2-107 220-328 (347)
371 3cvr_A Invasion plasmid antige 99.2 1.9E-11 6.6E-16 121.7 10.6 89 3-103 100-193 (571)
372 3bz5_A Internalin-J, INLJ; leu 99.2 4.4E-11 1.5E-15 116.3 12.8 97 2-107 126-250 (457)
373 1dce_A Protein (RAB geranylger 99.2 1E-11 3.5E-16 123.9 8.5 95 2-97 462-567 (567)
374 1jl5_A Outer protein YOPM; leu 99.2 5.9E-11 2E-15 115.3 13.0 93 3-103 131-228 (454)
375 3bz5_A Internalin-J, INLJ; leu 99.2 3.6E-11 1.2E-15 116.9 11.2 100 2-107 169-281 (457)
376 1xeu_A Internalin C; cellular 99.2 2.5E-11 8.5E-16 109.3 8.4 98 2-105 62-165 (263)
377 1o6v_A Internalin A; bacterial 99.2 3.2E-11 1.1E-15 117.4 9.8 98 2-105 242-346 (466)
378 1o6v_A Internalin A; bacterial 99.2 3.7E-11 1.3E-15 117.0 10.0 100 2-107 220-326 (466)
379 1jl5_A Outer protein YOPM; leu 99.2 1.7E-11 5.9E-16 119.1 7.5 102 27-138 297-408 (454)
380 3g06_A SSPH2 (leucine-rich rep 99.2 3.4E-11 1.1E-15 121.3 8.9 106 3-114 181-308 (622)
381 1ds9_A Outer arm dynein; leuci 99.1 9E-13 3.1E-17 113.4 -4.2 103 2-107 17-132 (198)
382 3dxp_A Putative acyl-COA dehyd 99.1 3.9E-10 1.3E-14 105.9 10.6 130 205-338 43-248 (359)
383 2ast_B S-phase kinase-associat 99.1 2.1E-11 7.2E-16 113.1 1.5 99 2-100 92-205 (336)
384 2ca6_A RAN GTPase-activating p 99.0 2.6E-11 8.8E-16 115.1 0.9 38 66-103 159-200 (386)
385 3g06_A SSPH2 (leucine-rich rep 99.0 8E-10 2.7E-14 111.2 11.6 35 66-104 221-255 (622)
386 2ifg_A High affinity nerve gro 99.0 3.8E-10 1.3E-14 105.3 8.6 84 30-113 11-103 (347)
387 4ay9_X Follicle-stimulating ho 99.0 3.9E-10 1.3E-14 105.6 7.5 64 45-110 157-222 (350)
388 2ca6_A RAN GTPase-activating p 99.0 4.6E-11 1.6E-15 113.3 1.1 61 44-104 189-258 (386)
389 4ay9_X Follicle-stimulating ho 99.0 2.8E-10 9.5E-15 106.6 6.0 97 3-99 30-137 (350)
390 3goz_A Leucine-rich repeat-con 99.0 1.3E-10 4.5E-15 109.3 3.3 104 3-106 22-154 (362)
391 3goz_A Leucine-rich repeat-con 99.0 1.2E-10 4E-15 109.7 2.5 110 2-111 49-188 (362)
392 2ast_B S-phase kinase-associat 99.0 1.5E-10 5.1E-15 107.3 2.5 107 3-110 70-190 (336)
393 1z7x_W Ribonuclease inhibitor; 98.9 1.4E-10 4.9E-15 112.1 -0.4 103 3-105 227-356 (461)
394 1z7x_W Ribonuclease inhibitor; 98.8 5.6E-10 1.9E-14 107.9 -1.2 112 2-113 255-397 (461)
395 3r70_A Aminoglycoside phosphot 98.7 5.5E-08 1.9E-12 89.8 9.1 127 201-338 38-237 (320)
396 3un9_A NLR family member X1; l 98.7 1.4E-09 4.8E-14 102.8 -1.8 103 3-105 101-226 (372)
397 3sb4_A Hypothetical leucine ri 98.6 1.3E-07 4.5E-12 87.5 8.8 111 2-114 100-273 (329)
398 3sg8_A APH(2'')-ID; antibiotic 98.6 1.3E-07 4.5E-12 86.5 8.4 128 205-339 25-224 (304)
399 3rw6_A Nuclear RNA export fact 98.6 3.4E-08 1.2E-12 88.6 4.3 85 8-107 148-237 (267)
400 1io0_A Tropomodulin; LRR prote 98.5 2.1E-08 7.2E-13 85.1 1.4 102 2-103 35-164 (185)
401 3rw6_A Nuclear RNA export fact 98.5 1.6E-08 5.6E-13 90.7 0.6 59 47-105 148-211 (267)
402 3un9_A NLR family member X1; l 98.5 7.7E-09 2.6E-13 97.7 -2.1 103 3-105 72-198 (372)
403 3sb4_A Hypothetical leucine ri 98.5 2.7E-07 9.2E-12 85.3 7.5 95 2-113 225-320 (329)
404 4gkh_A Aminoglycoside 3'-phosp 98.4 1.4E-06 4.9E-11 77.8 11.8 127 207-338 31-223 (272)
405 3tdw_A Gentamicin resistance p 98.4 1.1E-06 3.7E-11 80.5 10.4 126 206-338 25-224 (306)
406 3d1u_A Putative fructosamine-3 98.3 2E-06 6.9E-11 78.1 10.5 65 204-272 19-97 (288)
407 3ogk_B Coronatine-insensitive 98.3 2.4E-07 8.1E-12 92.3 3.0 72 2-74 163-251 (592)
408 3ogk_B Coronatine-insensitive 98.3 5.2E-08 1.8E-12 97.1 -2.3 103 2-104 111-234 (592)
409 3ovc_A Hygromycin-B 4-O-kinase 98.3 1.7E-06 5.7E-11 81.3 8.3 134 204-338 45-243 (362)
410 3ats_A Putative uncharacterize 98.1 3.5E-06 1.2E-10 78.5 6.5 68 206-273 26-121 (357)
411 2p1m_B Transport inhibitor res 97.9 8.7E-07 3E-11 88.2 -2.1 59 44-102 458-518 (594)
412 2p1m_B Transport inhibitor res 97.8 2.5E-06 8.6E-11 84.8 0.5 99 2-100 104-221 (594)
413 2q83_A YTAA protein; 2635576, 97.8 2.4E-05 8.1E-10 72.1 7.1 32 307-338 221-252 (346)
414 2olc_A MTR kinase, methylthior 97.8 4.2E-05 1.4E-09 72.4 8.4 64 205-270 35-120 (397)
415 2ra8_A Uncharacterized protein 97.8 2.9E-06 1E-10 79.6 -0.8 100 2-105 171-294 (362)
416 4fdw_A Leucine rich hypothetic 97.7 0.00012 4.2E-09 69.5 10.3 70 4-75 158-235 (401)
417 3jr1_A Putative fructosamine-3 97.7 0.00012 4.2E-09 67.0 9.4 128 205-334 41-232 (312)
418 1io0_A Tropomodulin; LRR prote 97.7 1.1E-05 3.6E-10 68.2 1.8 84 22-105 31-138 (185)
419 4fdw_A Leucine rich hypothetic 97.6 8.2E-05 2.8E-09 70.7 6.9 107 2-113 225-345 (401)
420 2pyw_A Uncharacterized protein 97.5 0.00036 1.2E-08 66.5 9.8 31 307-338 231-261 (420)
421 3f7w_A Putative fructosamine-3 97.3 0.0011 3.9E-08 59.5 10.3 65 203-271 18-96 (288)
422 3rfe_A Platelet glycoprotein I 97.3 0.00034 1.2E-08 55.3 5.9 58 46-105 12-70 (130)
423 3csv_A Aminoglycoside phosphot 97.2 0.0011 3.7E-08 60.9 9.4 32 307-338 182-217 (333)
424 2ra8_A Uncharacterized protein 97.1 0.00026 8.8E-09 66.2 4.1 107 2-108 138-270 (362)
425 3dxq_A Choline/ethanolamine ki 97.1 0.0014 4.8E-08 59.3 8.2 31 307-338 172-202 (301)
426 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00032 1.1E-08 59.5 1.0 100 3-102 41-169 (197)
427 2qg7_A Ethanolamine kinase PV0 96.7 0.0033 1.1E-07 60.6 8.1 63 206-272 114-188 (458)
428 2ppq_A HSK, HK, homoserine kin 96.7 0.0038 1.3E-07 56.8 8.0 148 190-338 7-217 (322)
429 3feg_A Choline/ethanolamine ki 96.7 0.004 1.4E-07 58.4 8.0 129 206-338 56-254 (379)
430 1nw1_A Choline kinase (49.2 KD 96.5 0.0013 4.3E-08 63.0 3.7 62 206-271 79-158 (429)
431 3rfe_A Platelet glycoprotein I 96.5 0.0029 9.8E-08 49.9 4.9 57 6-79 11-68 (130)
432 3e4g_A ATP synthase subunit S, 96.5 0.00078 2.7E-08 56.1 1.5 58 44-101 87-150 (176)
433 3c5i_A Choline kinase; choline 96.4 0.0041 1.4E-07 57.9 6.4 31 307-338 211-241 (369)
434 1zyl_A Hypothetical protein YI 96.4 0.016 5.3E-07 52.8 10.0 130 206-338 32-223 (328)
435 4h09_A Hypothetical leucine ri 96.4 0.02 6.9E-07 53.2 10.9 107 3-113 217-332 (379)
436 4gt6_A Cell surface protein; l 96.3 0.012 4E-07 55.3 8.5 38 60-98 305-342 (394)
437 4h09_A Hypothetical leucine ri 96.2 0.01 3.6E-07 55.2 8.0 100 2-104 239-346 (379)
438 3i1a_A Spectinomycin phosphotr 96.1 0.014 4.9E-07 53.7 8.0 32 307-338 205-236 (339)
439 4gt6_A Cell surface protein; l 96.0 0.0098 3.4E-07 55.8 6.5 97 2-102 264-369 (394)
440 4fs7_A Uncharacterized protein 95.8 0.012 4E-07 55.3 6.3 92 3-100 276-376 (394)
441 4fs7_A Uncharacterized protein 95.5 0.041 1.4E-06 51.5 8.6 91 3-98 230-328 (394)
442 3e4g_A ATP synthase subunit S, 95.4 0.0026 9E-08 52.9 0.0 61 43-103 62-128 (176)
443 3mes_A Choline kinase; malaria 94.9 0.035 1.2E-06 52.8 6.2 31 307-338 261-291 (424)
444 3f2s_A CK, chetk-alpha, cholin 94.9 0.031 1.1E-06 52.7 5.8 32 307-338 243-280 (401)
445 1pgv_A TMD-1, tropomodulin TMD 94.5 0.012 4.2E-07 49.7 1.6 77 24-100 38-136 (197)
446 3g15_A CK, chetk-alpha, cholin 89.7 0.1 3.4E-06 49.2 1.4 30 309-338 245-280 (401)
447 4ano_A ESSB; membrane protein, 83.5 4.3 0.00015 34.5 8.1 88 242-341 47-136 (219)
448 4ann_A ESSB; membrane protein, 83.0 2.8 9.4E-05 35.6 6.6 90 242-342 42-132 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 77.0 0.27 9.2E-06 47.2 -1.8 47 205-254 147-213 (463)
450 2lz0_A Uncharacterized protein 42.8 29 0.001 25.1 4.2 41 59-100 13-53 (100)
451 2lz0_A Uncharacterized protein 33.7 98 0.0034 22.2 5.9 49 12-76 5-53 (100)
452 2yle_A Protein spire homolog 1 25.6 1.2E+02 0.0041 25.7 5.7 60 271-332 34-93 (229)
453 2x6h_A GH13170P, VPS34, phosph 21.3 51 0.0018 33.0 3.0 44 287-337 530-575 (696)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=302.16 Aligned_cols=155 Identities=28% Similarity=0.506 Sum_probs=131.7
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEeh-------------hhHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIK-------------SFDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK-------------~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
+++...+.||+|+||+||+|++++ .|||| .|.+|++++++++|||||+++++|.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 567778999999999999999764 58886 35689999999999999999999875 457999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
|+||+|.++++.....++|.++..|+.|||+||+||| +.+||||||||+|||+++++.+||+|||+|+.........
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999887778999999999999999999999 8899999999999999999999999999999865443333
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
.....+||+.||||
T Consensus 190 ~~~~~~GT~~ymAP 203 (307)
T 3omv_A 190 QVEQPTGSVLWMAP 203 (307)
T ss_dssp ----CCCCTTSCCH
T ss_pred eecccccCCCccCH
Confidence 34567899999998
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=6e-40 Score=302.84 Aligned_cols=157 Identities=33% Similarity=0.506 Sum_probs=141.8
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
++|+..++||+|+||+||+|+. .+|+.||||. +.+|++++++++|||||+++++|++++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5699999999999999999996 4799999984 356999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
|||+||+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999764 36889999999999999999999 89999999999999999999999999999998765443
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
.....+.+||+.||||
T Consensus 188 ~~~~~~~~GTp~YmAP 203 (311)
T 4aw0_A 188 QARANSFVGTAQYVSP 203 (311)
T ss_dssp CCCBCCCCSCGGGCCH
T ss_pred cccccCcccCcccCCH
Confidence 3344567899999998
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.7e-40 Score=303.42 Aligned_cols=158 Identities=29% Similarity=0.524 Sum_probs=136.6
Q ss_pred CCCCCCCeeccCCCccEEEEEcc------CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
++|...+.||+|+||.||+|++. ++..||||. |.+|++++++++|||||+++++|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45677789999999999999864 477899973 6789999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEE
Q 040294 263 VLEYMTNGSLEKVLYSS------------NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHL 330 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki 330 (360)
|||||++|+|.++|+.. ...++|.+++.|+.|||+||+||| +++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999753 245899999999999999999999 899999999999999999999999
Q ss_pred eecccccccCCCCCceeeecccccCcccCC
Q 040294 331 SDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 331 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+|||+|+...............||+.||||
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 199 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 199 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCH
T ss_pred CCcccceecCCCCceeecCceecChhhcCH
Confidence 999999987554433333445799999998
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=304.35 Aligned_cols=158 Identities=28% Similarity=0.506 Sum_probs=129.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc------CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
++|...+.||+|+||.||+|+++ +++.||||. |.+|+++|++++|||||+++++|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35666789999999999999864 478899983 6789999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcE
Q 040294 263 VLEYMTNGSLEKVLYSSN--------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVA 328 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ 328 (360)
|||||++|+|.++++... ..++|.+++.|+.|||+||+||| +++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997532 35899999999999999999999 8899999999999999999999
Q ss_pred EEeecccccccCCCCCceeeecccccCcccCC
Q 040294 329 HLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 329 ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+|||+|+.+............+||+.||||
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 229 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP 229 (329)
T ss_dssp EECCCC----------------CCCCGGGCCH
T ss_pred EEcccccceeccCCCcceecCcccccccccCh
Confidence 99999999987654433344557899999998
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.5e-39 Score=301.27 Aligned_cols=156 Identities=26% Similarity=0.452 Sum_probs=136.6
Q ss_pred CCCCCeeccCCCccEEEEEcc------CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 202 FSANNLIGRGSFGSVYKARLQ------DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 202 f~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
++..+.||+|+||+||+|++. +++.||||. |.+|+.++++++|||||+++++|.+++..+||
T Consensus 28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV 107 (308)
T 4gt4_A 28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMI 107 (308)
T ss_dssp EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEE
Confidence 455678999999999999863 467899973 67899999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcE
Q 040294 264 LEYMTNGSLEKVLYSSN---------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVA 328 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ 328 (360)
||||++|+|.++|.... ..++|.+++.|+.|||+||+||| +.+||||||||+|||+++++.+
T Consensus 108 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~ 184 (308)
T 4gt4_A 108 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNV 184 (308)
T ss_dssp EECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCE
Confidence 99999999999996432 35899999999999999999999 8999999999999999999999
Q ss_pred EEeecccccccCCCCCceeeecccccCcccCC
Q 040294 329 HLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 329 ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+|||+|+.+...+........+||++||||
T Consensus 185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 216 (308)
T 4gt4_A 185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216 (308)
T ss_dssp EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred EECCcccceeccCCCceeEecccccCCcccCH
Confidence 99999999987554433334456899999998
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.4e-39 Score=302.49 Aligned_cols=156 Identities=27% Similarity=0.455 Sum_probs=133.2
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
++|+..+.||+|+||+||+|+. .+|+.||||. +.+|++++++++|||||+++++|++++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788999999999999999996 4799999984 4579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 266 YMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+||+|.+++...+ ..+++.++..|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 999999999997543 45788899999999999999999 8999999999999999999999999999999764321
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
......+||+.||||
T Consensus 180 -~~~~~~~GT~~YmAP 194 (350)
T 4b9d_A 180 -ELARACIGTPYYLSP 194 (350)
T ss_dssp -HHHHHHHSCCTTCCH
T ss_pred -ccccccCCCccccCH
Confidence 122456899999998
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.5e-39 Score=299.37 Aligned_cols=154 Identities=28% Similarity=0.390 Sum_probs=139.3
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
..|+..+.||+|+||+||+|+.+ +|+.||||. +.+|+++|++++|||||+++++|.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 35888899999999999999964 799999984 568999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
+||+|.+++... .+++.++..|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999999763 5899999999999999999999 89999999999999999999999999999998754432 2
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
..+.+||+.||||
T Consensus 227 ~~~~~GTp~YmAP 239 (346)
T 4fih_A 227 RKSLVGTPYWMAP 239 (346)
T ss_dssp BCCCCSCGGGCCH
T ss_pred ccccccCcCcCCH
Confidence 3457899999998
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.9e-38 Score=296.17 Aligned_cols=157 Identities=27% Similarity=0.379 Sum_probs=135.8
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCCCCH
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF------DVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTNGSL 272 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 272 (360)
+.|+..+.||+|+||.||+|+.+ +|+.||||.+ .+|++++++++|||||+++++|.+++..|||||||+||+|
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 45777789999999999999964 7999999964 4799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC-cEEEeecccccccCCCCCc---eee
Q 040294 273 EKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI-VAHLSDFGIAKLLTGEDQS---MTQ 348 (360)
Q Consensus 273 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DFGla~~~~~~~~~---~~~ 348 (360)
.+++... ..+++..+..|+.||+.||+||| +.+|+||||||+|||++.++ .+||+|||+|+.+...... ...
T Consensus 138 ~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~ 213 (336)
T 4g3f_A 138 GQLIKQM-GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTG 213 (336)
T ss_dssp HHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------
T ss_pred HHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecC
Confidence 9999764 36899999999999999999999 99999999999999999887 6999999999987643211 122
Q ss_pred ecccccCcccCC
Q 040294 349 TQTLATIGYMAP 360 (360)
Q Consensus 349 ~~~~gt~~Y~aP 360 (360)
...+||+.||||
T Consensus 214 ~~~~GT~~YmAP 225 (336)
T 4g3f_A 214 DYIPGTETHMAP 225 (336)
T ss_dssp CCCCCCGGGCCH
T ss_pred CccccCccccCH
Confidence 346899999998
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=301.57 Aligned_cols=154 Identities=28% Similarity=0.390 Sum_probs=139.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
+.|+..+.||+|+||.||+|+.+ +|+.||||. +.+|+++|++++|||||+++++|.+++.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 45888999999999999999964 799999984 568999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
+||+|.+++... .+++.++..|+.||+.||+||| +.+||||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--C
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--c
Confidence 999999999754 4889999999999999999999 89999999999999999999999999999998754432 2
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
..+.+||+.||||
T Consensus 304 ~~~~~GTp~YmAP 316 (423)
T 4fie_A 304 RKSLVGTPYWMAP 316 (423)
T ss_dssp BCCCEECTTTCCH
T ss_pred ccccccCcCcCCH
Confidence 3467899999998
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-38 Score=287.04 Aligned_cols=150 Identities=31% Similarity=0.450 Sum_probs=130.1
Q ss_pred CCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecC----CCeEEEEE
Q 040294 203 SANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSN----EDFRALVL 264 (360)
Q Consensus 203 ~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~ 264 (360)
+..+.||+|+||.||+|++. ++..||||. |.+|++++++++|||||+++++|.+ ++..||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 44567999999999999964 788999973 5679999999999999999999864 35689999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCceeec-CCCcEEEeecccccccCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTP--IIHCDLKPHNVLLD-DNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~--iiHrdlk~~NiLl~-~~~~~ki~DFGla~~~~~ 341 (360)
|||+||+|.+++... ..+++..+..++.||+.||+||| +.+ |+||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999764 46889999999999999999999 666 99999999999998 479999999999986543
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
. ...+.+||+.||||
T Consensus 185 ~----~~~~~~GTp~YmAP 199 (290)
T 3fpq_A 185 S----FAKAVIGTPEFMAP 199 (290)
T ss_dssp T----SBEESCSSCCCCCG
T ss_pred C----ccCCcccCccccCH
Confidence 2 23457899999999
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.4e-38 Score=284.39 Aligned_cols=154 Identities=26% Similarity=0.467 Sum_probs=125.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||+||+|+. .+|+.||||. +.+|++++++++|||||++++++.+++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999996 4799999984 45799999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||| +|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 68999999765 46899999999999999999999 8999999999999999999999999999998765432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
...+.+||+.||||
T Consensus 167 ---~~~~~~GT~~Y~AP 180 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAP 180 (275)
T ss_dssp -----------CTTSCH
T ss_pred ---ccCCeeECcccCCh
Confidence 23457899999998
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-37 Score=288.86 Aligned_cols=157 Identities=27% Similarity=0.437 Sum_probs=130.0
Q ss_pred CCCCCCeeccCCCccEEEEEccCCcEEEehhh----------HHHHHHhhcCCCCCeeEEEEEecCCC----eEEEEEEc
Q 040294 201 GFSANNLIGRGSFGSVYKARLQDGMEFAIKSF----------DVECEVMKSIHHRNLVKIISSCSNED----FRALVLEY 266 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~----------~~E~~~l~~l~hpniv~l~~~~~~~~----~~~lv~e~ 266 (360)
+|...+.||+|+||+||+|++ +|+.||||.+ +.|+..+.+++|||||+++++|.+++ ..+|||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 355678999999999999998 5899999853 34666677899999999999998654 57999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFG-----FSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~-----~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
|++|+|.++++.. .++|..+.+++.|+++||+|||.. ..++|+||||||+|||++.++.+||+|||+|+....
T Consensus 83 ~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 83 HEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred CCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 9999999999764 488999999999999999999932 234999999999999999999999999999998765
Q ss_pred CCCce--eeecccccCcccCC
Q 040294 342 EDQSM--TQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~--~~~~~~gt~~Y~aP 360 (360)
..... .....+||++||||
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAP 181 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp TTTEESCC-----CCGGGCCH
T ss_pred CCCceeeecccccccccccCH
Confidence 43221 22346899999998
No 13
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2e-38 Score=292.33 Aligned_cols=155 Identities=28% Similarity=0.429 Sum_probs=132.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc----CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
++|+..+.||+|+||+||+|+.. +++.||||. +.+|++++++++|||||++++++++++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46899999999999999999852 577899984 4579999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
|||||+||+|.+++...+ .+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997643 5889999999999999999999 899999999999999999999999999999875433
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. ....+.+||+.||||
T Consensus 180 ~--~~~~~~~GT~~YmAP 195 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAP 195 (304)
T ss_dssp ---CCCCSCCCCGGGCCH
T ss_pred C--ccccccccCcccCCH
Confidence 2 123457899999998
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9e-38 Score=288.38 Aligned_cols=158 Identities=24% Similarity=0.477 Sum_probs=125.3
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCC--------
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNED-------- 258 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~-------- 258 (360)
++|+..+.||+|+||+||+|+.+ +|+.||||. +.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46888999999999999999964 789999984 457999999999999999999987544
Q ss_pred ----eEEEEEEccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEee
Q 040294 259 ----FRALVLEYMTNGSLEKVLYSSNC--ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSD 332 (360)
Q Consensus 259 ----~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 332 (360)
..|+|||||++|+|.+++..... ..++..+..|+.||++||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 47999999999999999976542 2456678889999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCc----------eeeecccccCcccCC
Q 040294 333 FGIAKLLTGEDQS----------MTQTQTLATIGYMAP 360 (360)
Q Consensus 333 FGla~~~~~~~~~----------~~~~~~~gt~~Y~aP 360 (360)
||+|+.+...... ...++.+||+.||||
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAP 199 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP 199 (299)
T ss_dssp CCCC--------------------------CCCTTSCH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCH
Confidence 9999987543211 112346899999998
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.4e-37 Score=288.53 Aligned_cols=160 Identities=25% Similarity=0.437 Sum_probs=137.9
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc------CCcEEEehh------------hHHHHHHhhcCCC-CCeeEEEEEecCC-
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKS------------FDVECEVMKSIHH-RNLVKIISSCSNE- 257 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~------------~~~E~~~l~~l~h-pniv~l~~~~~~~- 257 (360)
..++|+..+.||+|+||.||+|++. +++.||||. |.+|+++|.+++| ||||+++++|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 3467888999999999999999854 235799973 5679999999975 8999999999764
Q ss_pred CeEEEEEEccCCCCHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee
Q 040294 258 DFRALVLEYMTNGSLEKVLYSS---------------NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL 322 (360)
Q Consensus 258 ~~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl 322 (360)
+..+||||||++|+|.++|+.. ...++|..++.++.|||+||+||| +++||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceee
Confidence 5789999999999999999753 234889999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 323 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 323 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
++++.+||+|||+|+.+............+||+.||||
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 256 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 256 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence 99999999999999987655444445567899999998
No 16
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.5e-35 Score=293.37 Aligned_cols=154 Identities=29% Similarity=0.454 Sum_probs=137.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhhH-----------------HHHHHhhcCCCCCeeEEEEEecCCCeE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSFD-----------------VECEVMKSIHHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~~-----------------~E~~~l~~l~hpniv~l~~~~~~~~~~ 260 (360)
.++|+..++||+|+||.||+|+.+ +|+.||||.+. .++.+++.++|||||+++++|++++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999965 79999998541 235677788999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
|||||||+||+|.+++... ..+++..+..|+.||+.||+||| +.+||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999999764 45889999999999999999999 9999999999999999999999999999999875
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
... ..+.+||+.||||
T Consensus 344 ~~~----~~t~~GTp~YmAP 359 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAP 359 (689)
T ss_dssp SCC----CCSCCSCGGGCCH
T ss_pred CCC----CCCccCCcCccCH
Confidence 432 2356899999998
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=277.82 Aligned_cols=156 Identities=30% Similarity=0.447 Sum_probs=133.7
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecC------CCe
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSN------EDF 259 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~------~~~ 259 (360)
++|+..+.||+|+||+||+|+. .+|+.||||.+ .+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5688899999999999999996 47999999853 469999999999999999998764 357
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
+|||||||+ |+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 6899999764 46899999999999999999999 899999999999999999999999999999976
Q ss_pred CCCCC--ceeeecccccCcccCC
Q 040294 340 TGEDQ--SMTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~--~~~~~~~~gt~~Y~aP 360 (360)
..... .....+.+||+.||||
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~AP 231 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAP 231 (398)
T ss_dssp -------CCCCCSSCCCCTTCCH
T ss_pred ccCccccccccccceeChHhcCH
Confidence 43321 1223457899999998
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.5e-34 Score=273.64 Aligned_cols=136 Identities=27% Similarity=0.415 Sum_probs=123.2
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc----CCcEEEehh---------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKS---------FDVECEVMKSI-HHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~---------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 263 (360)
..+.|+..+.||+|+||+||+|+.+ +++.||||. +.+|+++++.+ +|||||+++++|.+++..|+|
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv 98 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA 98 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence 4578999999999999999999753 567899984 45799999988 699999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC-CcEEEeecccccccC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN-IVAHLSDFGIAKLLT 340 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DFGla~~~~ 340 (360)
||||++|+|.+++. .+++.++..++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 99 mE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 99 MPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 99999999999984 3788899999999999999999 8999999999999999876 799999999998654
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.8e-34 Score=284.54 Aligned_cols=156 Identities=24% Similarity=0.407 Sum_probs=140.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
.++|++.+.||+|+||.||+|+.+ +|+.||+|. +.+|+++|+.++|||||+++++|.+++..||||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 357899999999999999999964 799999984 45799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC--CcEEEeecccccccCCCCC
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN--IVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~--~~~ki~DFGla~~~~~~~~ 344 (360)
|+||+|.+++......+++.++..++.||+.||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999776667899999999999999999999 8999999999999999854 899999999999876543
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
.....+||+.||||
T Consensus 312 --~~~~~~GT~~y~AP 325 (573)
T 3uto_A 312 --SVKVTTGTAEFAAP 325 (573)
T ss_dssp --EEEEECSSGGGCCH
T ss_pred --ceeeeEECccccCH
Confidence 23456899999998
No 20
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.98 E-value=1.7e-32 Score=266.00 Aligned_cols=163 Identities=25% Similarity=0.385 Sum_probs=144.5
Q ss_pred HHHHHhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCC
Q 040294 194 ELLRATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNED 258 (360)
Q Consensus 194 ~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~ 258 (360)
++...+++|+..++||+|+||.||+|+.+ +++.||+|. +..|+.++..++|||||+++++|.+++
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 34445678999999999999999999975 578899984 456899999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
..++|||||++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 999999999999999999876667999999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
..... .......+||++||||
T Consensus 225 ~~~~~-~~~~~~~~GT~~Y~AP 245 (437)
T 4aw2_A 225 LMEDG-TVQSSVAVGTPDYISP 245 (437)
T ss_dssp CCTTS-CEECCSCCSCGGGCCH
T ss_pred cccCC-CcccccccCCcCeeCh
Confidence 65443 2233456899999998
No 21
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=4.3e-32 Score=261.40 Aligned_cols=163 Identities=25% Similarity=0.411 Sum_probs=143.9
Q ss_pred HHHHHhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCC
Q 040294 194 ELLRATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNED 258 (360)
Q Consensus 194 ~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~ 258 (360)
+.....++|+..++||+|+||.||+|+.+ +++.||||. +..|.+++..++||||++++++|++++
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 33445678999999999999999999974 789999984 346889999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
..|+||||+++|+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 999999999999999999875557899999999999999999999 89999999999999999999999999999998
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.... .......+||+.||||
T Consensus 212 ~~~~~-~~~~~~~~Gt~~Y~AP 232 (412)
T 2vd5_A 212 LRADG-TVRSLVAVGTPDYLSP 232 (412)
T ss_dssp CCTTS-CEECSSCCSCGGGCCH
T ss_pred ccCCC-ccccceeccccCcCCH
Confidence 75433 2223356899999998
No 22
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.97 E-value=2.4e-31 Score=247.85 Aligned_cols=173 Identities=41% Similarity=0.628 Sum_probs=152.2
Q ss_pred CCccCHHHHHHHhCCCCCCCeeccCCCccEEEEEccCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEe
Q 040294 187 RRRFSYLELLRATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSC 254 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~ 254 (360)
...+++.++...+++|+..+.||+|+||.||+|+..+++.||||. +.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456788899999999999999999999999999988899999983 46799999999999999999999
Q ss_pred cCCCeEEEEEEccCCCCHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEe
Q 040294 255 SNEDFRALVLEYMTNGSLEKVLYSSN---CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLS 331 (360)
Q Consensus 255 ~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 331 (360)
...+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||..+..+|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998643 348999999999999999999994333499999999999999999999999
Q ss_pred ecccccccCCCCCceeeecccccCcccCC
Q 040294 332 DFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 332 DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|||+++...... ........||+.|+||
T Consensus 177 Dfg~~~~~~~~~-~~~~~~~~gt~~y~aP 204 (326)
T 3uim_A 177 DFGLAKLMDYKD-THVTTAVRGTIGHIAP 204 (326)
T ss_dssp CCSSCEECCSSS-SCEECCCCSCGGGCCH
T ss_pred cCccccccCccc-ccccccccCCcCccCH
Confidence 999999765433 2233445699999998
No 23
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=1.1e-31 Score=258.34 Aligned_cols=160 Identities=27% Similarity=0.405 Sum_probs=141.4
Q ss_pred HHHHhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCe
Q 040294 195 LLRATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDF 259 (360)
Q Consensus 195 ~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~ 259 (360)
+....++|+..++||+|+||.||+|+.+ +++.||+|. +..|+++++.++|||||+++++|.+++.
T Consensus 64 ~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~ 143 (410)
T 3v8s_A 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY 143 (410)
T ss_dssp HSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence 3345678999999999999999999965 688999984 3469999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
.|+|||||+||+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 99999999999999999754 4788899999999999999999 899999999999999999999999999999887
Q ss_pred CCCCCceeeecccccCcccCC
Q 040294 340 TGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... .......+||+.||||
T Consensus 219 ~~~~-~~~~~~~~gt~~Y~AP 238 (410)
T 3v8s_A 219 NKEG-MVRCDTAVGTPDYISP 238 (410)
T ss_dssp CTTS-EEECCSCCSCGGGCCH
T ss_pred ccCC-cccccCCcCCccccCH
Confidence 5433 2233467899999998
No 24
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=1.2e-31 Score=249.55 Aligned_cols=165 Identities=42% Similarity=0.687 Sum_probs=144.6
Q ss_pred HHHHHHhCCCCCCCeeccCCCccEEEEEccCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEE
Q 040294 193 LELLRATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 193 ~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 261 (360)
.++...+++|+..+.||+|+||.||+|+.++++.||||. +.+|++++++++||||++++++|..++..+
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 344456789999999999999999999988899999983 567999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 262 LVLEYMTNGSLEKVLYSSN---CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
+||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9999999999999997543 24899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
..............||+.|+||
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aP 210 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDP 210 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCH
T ss_pred cccccccccccccCCCccccCH
Confidence 5543322233445699999998
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=7.8e-31 Score=242.82 Aligned_cols=158 Identities=28% Similarity=0.509 Sum_probs=138.0
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
++|...+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 56778899999999999999964 688999983 467999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce-
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM- 346 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~- 346 (360)
++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999886677999999999999999999999 8999999999999999999999999999998765432110
Q ss_pred -----------eeecccccCcccCC
Q 040294 347 -----------TQTQTLATIGYMAP 360 (360)
Q Consensus 347 -----------~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aP 191 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAP 191 (310)
T ss_dssp -------------CCCCSCGGGCCH
T ss_pred ccccccccccccccccCCCcceeCH
Confidence 11145799999998
No 26
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=4.7e-31 Score=250.12 Aligned_cols=159 Identities=21% Similarity=0.322 Sum_probs=137.0
Q ss_pred hCCCCCCCeeccCCCccEEEEE------ccCCcEEEehh--------hHHHHHHhhcCC---CCCeeEEEEEecCCCeEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKAR------LQDGMEFAIKS--------FDVECEVMKSIH---HRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~------~~~~~~vavK~--------~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~ 261 (360)
.++|...+.||+|+||.||+|. ..+++.||||. +..|+++++.++ |+||+++++++..++..+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~ 143 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSV 143 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcE
Confidence 4668888999999999999994 45788999984 456788887777 999999999999999999
Q ss_pred EEEEccCCCCHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC-----------CC
Q 040294 262 LVLEYMTNGSLEKVLYS----SNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD-----------NI 326 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~-----------~~ 326 (360)
+|||||++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+|||++. ++
T Consensus 144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CT
T ss_pred EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999974 3456999999999999999999999 899999999999999998 89
Q ss_pred cEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 327 VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 327 ~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.+||+|||+|+.+............+||++||||
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP 254 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV 254 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCCh
Confidence 9999999999876433323344567899999998
No 27
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.97 E-value=7.5e-31 Score=245.51 Aligned_cols=155 Identities=29% Similarity=0.429 Sum_probs=138.9
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+. .+|+.||||. +.+|+++++.++||||+++++++..++..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45788999999999999999996 5899999984 346999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999999764 35888999999999999999999 8899999999999999999999999999998765432
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
.....+||++|+||
T Consensus 169 --~~~~~~gt~~y~aP 182 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAP 182 (328)
T ss_dssp --GGGTTSSSGGGCCH
T ss_pred --ccccccCCcceeCc
Confidence 23456799999998
No 28
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=1.1e-30 Score=245.24 Aligned_cols=156 Identities=29% Similarity=0.411 Sum_probs=137.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+.+ +|+.||+|.+ ..|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357888999999999999999965 7899999843 4588999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999998754 35788899999999999999999 8899999999999999999999999999998643322
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
......+||+.||||
T Consensus 160 --~~~~~~~gt~~y~aP 174 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAP 174 (337)
T ss_dssp --CCBCCCEECGGGCCG
T ss_pred --CcccccccChhhCCh
Confidence 123456899999998
No 29
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=9.9e-31 Score=246.49 Aligned_cols=157 Identities=27% Similarity=0.415 Sum_probs=132.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|+..+.||+|+||.||+|+. .+|+.||||. +.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788899999999999999995 5889999984 4579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++....... .
T Consensus 89 ~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-~ 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-D 163 (347)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-C
Confidence 999999999997543 5889999999999999999999 8899999999999999999999999999998754332 1
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......+||+.|+||
T Consensus 164 ~~~~~~~gt~~y~aP 178 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAP 178 (347)
T ss_dssp --------CGGGCCH
T ss_pred ccccccCCccCccCH
Confidence 223456799999998
No 30
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.97 E-value=9.4e-31 Score=247.27 Aligned_cols=157 Identities=30% Similarity=0.411 Sum_probs=132.8
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcC-CCCCeeEEEEEecCCCeEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSI-HHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 261 (360)
..++|+..++||+|+||.||+|+.+ +++.||||.+ ..|.++++.+ +||||+++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3568999999999999999999965 6899999843 3578888887 6999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999999764 35889999999999999999999 88999999999999999999999999999986433
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. ......+||+.||||
T Consensus 177 ~~--~~~~~~~gt~~y~aP 193 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAP 193 (353)
T ss_dssp -----------CCGGGCCH
T ss_pred CC--ccccccCCCcCeECh
Confidence 22 233456899999998
No 31
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.97 E-value=4.3e-30 Score=237.23 Aligned_cols=170 Identities=36% Similarity=0.557 Sum_probs=149.8
Q ss_pred CCccCHHHHHHHhCCCCCC------CeeccCCCccEEEEEccCCcEEEehh---------------hHHHHHHhhcCCCC
Q 040294 187 RRRFSYLELLRATNGFSAN------NLIGRGSFGSVYKARLQDGMEFAIKS---------------FDVECEVMKSIHHR 245 (360)
Q Consensus 187 ~~~~~~~~~~~~~~~f~~~------~~iG~G~~g~Vy~~~~~~~~~vavK~---------------~~~E~~~l~~l~hp 245 (360)
...+++.++..++++|+.. +.||+|+||.||+|+. +++.||||. +.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4568999999999999988 8999999999999997 578899873 45799999999999
Q ss_pred CeeEEEEEecCCCeEEEEEEccCCCCHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec
Q 040294 246 NLVKIISSCSNEDFRALVLEYMTNGSLEKVLYSS--NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD 323 (360)
Q Consensus 246 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~ 323 (360)
||+++++++.+++..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998743 345899999999999999999999 88999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 324 DNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 324 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.++.+||+|||+++...............||+.|+||
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP 204 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP 204 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCCh
Confidence 9999999999999876544333333446799999998
No 32
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.97 E-value=9.8e-31 Score=248.69 Aligned_cols=159 Identities=27% Similarity=0.487 Sum_probs=136.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc--------CCcEEEehh------------hHHHHHHhhcC-CCCCeeEEEEEecCC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ--------DGMEFAIKS------------FDVECEVMKSI-HHRNLVKIISSCSNE 257 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~------------~~~E~~~l~~l-~hpniv~l~~~~~~~ 257 (360)
.++|+..+.||+|+||.||+|+.. ++..||||. +.+|+++++++ +|||||+++++|..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356888899999999999999852 345799974 45799999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee
Q 040294 258 DFRALVLEYMTNGSLEKVLYSSN---------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL 322 (360)
Q Consensus 258 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl 322 (360)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999997643 24788999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 323 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 323 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.++.+||+|||+++.+.............||+.||||
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 274 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECH
Confidence 99999999999999976544322223345678999998
No 33
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=2.7e-30 Score=238.18 Aligned_cols=155 Identities=32% Similarity=0.454 Sum_probs=138.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35789999999999999999985 5789999984 45799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999999764 4888999999999999999999 88999999999999999999999999999987654432
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 172 ~~~~~~gt~~y~aP 185 (297)
T 3fxz_A 172 KRSTMVGTPYWMAP 185 (297)
T ss_dssp CBCCCCSCGGGCCH
T ss_pred ccCCccCCcCccCh
Confidence 23456799999998
No 34
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=248.13 Aligned_cols=154 Identities=31% Similarity=0.457 Sum_probs=138.1
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
++|+..+.||+|+||.||+|+.. +++.||+|. +.+|+++++.++|||||+++++|.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888999999999999999864 688999984 346999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+....
T Consensus 95 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET- 169 (384)
T ss_dssp CCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence 999999999999764 45889999999999999999999 8999999999999999999999999999999765432
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
.....+||+.|+||
T Consensus 170 --~~~~~~gt~~Y~aP 183 (384)
T 4fr4_A 170 --QITTMAGTKPYMAP 183 (384)
T ss_dssp --CBCCCCSCGGGCCG
T ss_pred --ceeccCCCccccCC
Confidence 23456899999998
No 35
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2e-30 Score=241.83 Aligned_cols=156 Identities=22% Similarity=0.369 Sum_probs=139.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+|+.. +++.||+|. +.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 357888999999999999999965 688899974 467999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC--CCcEEEeecccccccCCCCCc
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD--NIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~--~~~~ki~DFGla~~~~~~~~~ 345 (360)
++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+++.+....
T Consensus 84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-- 158 (321)
T 1tki_A 84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence 999999999876667899999999999999999999 899999999999999987 7899999999999875433
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 159 -~~~~~~gt~~y~aP 172 (321)
T 1tki_A 159 -NFRLLFTAPEYYAP 172 (321)
T ss_dssp -EEEEEESCGGGSCH
T ss_pred -ccccccCChhhcCc
Confidence 23446799999998
No 36
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.97 E-value=1.3e-30 Score=243.04 Aligned_cols=156 Identities=28% Similarity=0.443 Sum_probs=135.9
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehhh----------HHHHHHhhcCCCCCeeEEEEEecCCC----eEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF----------DVECEVMKSIHHRNLVKIISSCSNED----FRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~----------~~E~~~l~~l~hpniv~l~~~~~~~~----~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+.. ++.||||.+ ..|+.++++++|||||++++++.... ..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 356888899999999999999875 789999854 45888899999999999999998754 479999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC----------CeEEccCCCCceeecCCCcEEEeecc
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFST----------PIIHCDLKPHNVLLDDNIVAHLSDFG 334 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~----------~iiHrdlk~~NiLl~~~~~~ki~DFG 334 (360)
||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999764 4899999999999999999999 77 99999999999999999999999999
Q ss_pred cccccCCCCCceeeecccccCcccCC
Q 040294 335 IAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+++.+.............||+.|+||
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aP 202 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAP 202 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCH
T ss_pred cccccccccCccccccCccCccccCH
Confidence 99887654433333446799999998
No 37
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.97 E-value=2.8e-30 Score=240.64 Aligned_cols=153 Identities=30% Similarity=0.438 Sum_probs=136.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+.+ +|+.||+|.+ ..|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 356888999999999999999965 7899999843 3588899999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999999764 35888899999999999999999 999999999999999999999999999999876432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
....+||+.|+||
T Consensus 160 ----~~~~~gt~~y~aP 172 (318)
T 1fot_A 160 ----TYTLCGTPDYIAP 172 (318)
T ss_dssp ----BCCCCSCTTTCCH
T ss_pred ----cccccCCccccCH
Confidence 2346799999998
No 38
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.97 E-value=1.4e-30 Score=249.52 Aligned_cols=156 Identities=30% Similarity=0.375 Sum_probs=136.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSI-HHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 262 (360)
.++|+..++||+|+||.||+|+.+ +++.||+|. +..|..++.++ +|||||+++++|.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457889999999999999999965 678899974 34688888776 89999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++|+|..++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 131 V~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999764 35889999999999999999999 899999999999999999999999999999864322
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. ......+||+.||||
T Consensus 207 ~--~~~~~~~gt~~Y~aP 222 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAP 222 (396)
T ss_dssp T--CCBCCCCBCGGGCCH
T ss_pred C--CccccccCCcccCCc
Confidence 2 223457899999998
No 39
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.97 E-value=8.2e-31 Score=249.79 Aligned_cols=159 Identities=28% Similarity=0.478 Sum_probs=137.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|...+.||+|+||.||+|++. +++.||||. |.+|++++++++|||||+++++|..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 346778899999999999999975 789999983 4569999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++|+|.+++......+++.....++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999876566899999999999999999999 899999999999999999999999999999875432211
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
.......+++.|+||
T Consensus 270 ~~~~~~~~~~~y~aP 284 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAP 284 (377)
T ss_dssp CCSSCCEEEGGGSCH
T ss_pred ecCCCCCCCcCcCCH
Confidence 111123467889998
No 40
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.97 E-value=1.3e-30 Score=243.19 Aligned_cols=158 Identities=25% Similarity=0.398 Sum_probs=139.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|+..+.||+|+||.||+|+.. +++.||||. +.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467889999999999999999865 789999984 4579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999998654 45889999999999999999999 899999999999999999999999999999876533322
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......+||+.|+||
T Consensus 162 ~~~~~~~gt~~y~aP 176 (323)
T 3tki_A 162 RLLNKMCGTLPYVAP 176 (323)
T ss_dssp CCBCSCCSCGGGSCH
T ss_pred cccCCCccCcCccCc
Confidence 233456799999998
No 41
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=2.8e-30 Score=241.19 Aligned_cols=158 Identities=30% Similarity=0.537 Sum_probs=134.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc----CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
++|+..+.||+|+||.||+|+.. .+..||||. +.+|++++++++||||++++++|.+++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45777899999999999999974 344699974 45699999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999877677999999999999999999999 8999999999999999999999999999999875432
Q ss_pred C-ceeeecccccCcccCC
Q 040294 344 Q-SMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~-~~~~~~~~gt~~Y~aP 360 (360)
. ........+|+.|+||
T Consensus 206 ~~~~~~~~~~~t~~y~aP 223 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAP 223 (325)
T ss_dssp -CCEECC---CCGGGSCH
T ss_pred cceeeccCCCCcccccCH
Confidence 2 1222334578899998
No 42
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=2.8e-30 Score=243.25 Aligned_cols=158 Identities=28% Similarity=0.428 Sum_probs=136.8
Q ss_pred HHhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcC-CCCCeeEEEEEecCCCeE
Q 040294 197 RATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSI-HHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 197 ~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 260 (360)
...++|...++||+|+||.||+|+.+ +++.||||.+ ..|.+++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 35678999999999999999999975 6889999854 3477778766 899999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 9999999999999999764 35889999999999999999999 8899999999999999999999999999998653
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
... ......+||+.|+||
T Consensus 170 ~~~--~~~~~~~gt~~y~aP 187 (345)
T 1xjd_A 170 LGD--AKTNTFCGTPDYIAP 187 (345)
T ss_dssp CTT--CCBCCCCSCGGGCCH
T ss_pred cCC--CcccCCCCCcccCCh
Confidence 322 123456899999998
No 43
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=1.5e-30 Score=235.97 Aligned_cols=157 Identities=28% Similarity=0.466 Sum_probs=139.4
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTN 269 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 269 (360)
++|+..+.||+|+||.||+|+..+++.||+|. +.+|++++++++||||+++++++.+++..++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 46778899999999999999988888999984 56799999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCceeee
Q 040294 270 GSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 349 (360)
Q Consensus 270 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~ 349 (360)
|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 165 (269)
T 4hcu_A 90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSST 165 (269)
T ss_dssp CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTT
T ss_pred CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccccc
Confidence 9999999877777899999999999999999999 8999999999999999999999999999998764322 11223
Q ss_pred cccccCcccCC
Q 040294 350 QTLATIGYMAP 360 (360)
Q Consensus 350 ~~~gt~~Y~aP 360 (360)
...+|+.|+||
T Consensus 166 ~~~~~~~y~aP 176 (269)
T 4hcu_A 166 GTKFPVKWASP 176 (269)
T ss_dssp STTCCGGGCCH
T ss_pred CcccccccCCH
Confidence 44578889998
No 44
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.96 E-value=5.4e-30 Score=238.83 Aligned_cols=166 Identities=27% Similarity=0.351 Sum_probs=143.4
Q ss_pred CccCHHHHHHHhCC----------CCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCC
Q 040294 188 RRFSYLELLRATNG----------FSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHR 245 (360)
Q Consensus 188 ~~~~~~~~~~~~~~----------f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hp 245 (360)
..+++.++..+++. |+..+.||+|+||.||+|+.. +|+.||||. +.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34677777766653 556678999999999999975 799999984 45799999999999
Q ss_pred CeeEEEEEecCCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC
Q 040294 246 NLVKIISSCSNEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN 325 (360)
Q Consensus 246 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~ 325 (360)
||++++++|...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999999864 35899999999999999999999 8899999999999999999
Q ss_pred CcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 326 IVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 326 ~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.+||+|||+++....... ......||+.|+||
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aP 210 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAP 210 (321)
T ss_dssp CCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCH
T ss_pred CcEEEeeeeeeeecccCcc--ccccccCCccccCH
Confidence 9999999999987654321 23356799999998
No 45
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=3.4e-30 Score=239.95 Aligned_cols=159 Identities=25% Similarity=0.463 Sum_probs=132.4
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCC-------
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNED------- 258 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~------- 258 (360)
.++|+..+.||+|+||.||+|+.+ +++.||||. +.+|++++++++|||||+++++|.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888899999999999999975 889999984 457999999999999999999985443
Q ss_pred --------------------------------------------------eEEEEEEccCCCCHHHHHhcCCC--CCCHH
Q 040294 259 --------------------------------------------------FRALVLEYMTNGSLEKVLYSSNC--ILDIL 286 (360)
Q Consensus 259 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~--~~~~~ 286 (360)
..++||||+++|+|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999986532 35666
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc----------eeeecccccCc
Q 040294 287 QRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS----------MTQTQTLATIG 356 (360)
Q Consensus 287 ~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~----------~~~~~~~gt~~ 356 (360)
.+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78899999999999999 899999999999999999999999999999987654211 12234579999
Q ss_pred ccCC
Q 040294 357 YMAP 360 (360)
Q Consensus 357 Y~aP 360 (360)
|+||
T Consensus 242 y~aP 245 (332)
T 3qd2_B 242 YMSP 245 (332)
T ss_dssp GSCH
T ss_pred ccCh
Confidence 9998
No 46
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.96 E-value=3.2e-30 Score=233.47 Aligned_cols=158 Identities=28% Similarity=0.450 Sum_probs=140.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
.++|+..+.||+|+||.||+|+.+++..||+|. +.+|++++++++||||+++++++.+++..++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 356788899999999999999998888999984 4679999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCceee
Q 040294 269 NGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 348 (360)
Q Consensus 269 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~ 348 (360)
+++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~ 162 (268)
T 3sxs_A 87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSS 162 (268)
T ss_dssp TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEEC
T ss_pred CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhcc
Confidence 99999999876666899999999999999999999 8899999999999999999999999999998765443 2223
Q ss_pred ecccccCcccCC
Q 040294 349 TQTLATIGYMAP 360 (360)
Q Consensus 349 ~~~~gt~~Y~aP 360 (360)
....+|+.|+||
T Consensus 163 ~~~~~~~~y~aP 174 (268)
T 3sxs_A 163 VGTKFPVKWSAP 174 (268)
T ss_dssp CSCCCCGGGCCH
T ss_pred cCCCcCcccCCH
Confidence 345577889998
No 47
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96 E-value=4.3e-30 Score=238.39 Aligned_cols=156 Identities=30% Similarity=0.458 Sum_probs=137.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|+..+.||+|+||.||+|+..+++.||+|. +.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 356888899999999999999998899999984 3469999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++ +|.+.+......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9985 898888877667899999999999999999999 88999999999999999999999999999987653321
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 175 -~~~~~~~t~~y~aP 188 (311)
T 3niz_A 175 -SYTHEVVTLWYRAP 188 (311)
T ss_dssp ----CCCCCCTTCCH
T ss_pred -cccCCcccCCcCCH
Confidence 23345789999998
No 48
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=3.2e-30 Score=245.39 Aligned_cols=158 Identities=28% Similarity=0.553 Sum_probs=126.6
Q ss_pred CCCCCCCeeccCCCccEEEEEcc----CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
++|+..+.||+|+||.||+|+.. ++..||||. |.+|++++++++||||++++++|..++..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 47889999999999999999865 567899983 45799999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 9999999999999877667999999999999999999999 8899999999999999999999999999998765432
Q ss_pred Cc-eeeecccccCcccCC
Q 040294 344 QS-MTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~-~~~~~~~gt~~Y~aP 360 (360)
.. .......+|+.|+||
T Consensus 202 ~~~~~~~~~~~~~~y~aP 219 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSP 219 (373)
T ss_dssp ------------CTTSCH
T ss_pred ccceeccCCCcCCCccCh
Confidence 11 112223467889998
No 49
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=3.8e-30 Score=236.75 Aligned_cols=156 Identities=28% Similarity=0.484 Sum_probs=132.3
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
++|+..+.||+|+||.||+|+. .+++.||+|. +.+|++++++++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 5688889999999999999985 4788999984 457999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 91 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS- 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc-
Confidence 9999999999997643 5889999999999999999999 8899999999999999999999999999998765332
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
........||+.|+||
T Consensus 166 ~~~~~~~~gt~~y~aP 181 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSP 181 (294)
T ss_dssp ---------CCSSCCH
T ss_pred ccccCccccCccccCH
Confidence 1223345799999998
No 50
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=4e-30 Score=242.23 Aligned_cols=155 Identities=31% Similarity=0.381 Sum_probs=135.9
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcC-CCCCeeEEEEEecCCCeEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSI-HHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 263 (360)
++|+..+.||+|+||.||+|+.+ +++.||+|.+ ..|..+++++ +|||||++++++.+++..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888899999999999999965 6889999843 4588888887 899999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999754 35889999999999999999999 8899999999999999999999999999998643222
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
......+||+.|+||
T Consensus 165 --~~~~~~~gt~~y~aP 179 (345)
T 3a8x_A 165 --DTTSTFCGTPNYIAP 179 (345)
T ss_dssp --CCBCCCCSCGGGCCH
T ss_pred --CcccccCCCccccCc
Confidence 123456899999998
No 51
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.96 E-value=6.7e-30 Score=242.13 Aligned_cols=155 Identities=26% Similarity=0.441 Sum_probs=137.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------------hHHHHHHhhcCCCCCeeEEEEEecCCCeE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------------FDVECEVMKSIHHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 260 (360)
.+.|+..+.||+|+||.||+|+.+ +|+.||+|. +.+|++++++++||||++++++|.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456888999999999999999965 789999973 45799999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC----cEEEeecccc
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI----VAHLSDFGIA 336 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~DFGla 336 (360)
++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999654 46889999999999999999999 88999999999999998776 7999999999
Q ss_pred cccCCCCCceeeecccccCcccCC
Q 040294 337 KLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 337 ~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.+.... .....+||+.|+||
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aP 187 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAP 187 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCH
T ss_pred eEcCCCC---ccccCCCCccEECc
Confidence 9865432 22346799999998
No 52
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.96 E-value=5.3e-30 Score=241.84 Aligned_cols=152 Identities=28% Similarity=0.404 Sum_probs=136.6
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
++|+..+.||+|+||.||+|+.. +|+.||||.+ .+|+++++.++||||+++++++.+++..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999965 7899999843 45889999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999999997643 5888999999999999999999 899999999999999999999999999999976432
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
....+||+.|+||
T Consensus 195 ---~~~~~gt~~y~aP 207 (350)
T 1rdq_E 195 ---TWTLCGTPEALAP 207 (350)
T ss_dssp ---BCCCEECGGGCCH
T ss_pred ---cccccCCccccCH
Confidence 2345799999998
No 53
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.96 E-value=6.5e-30 Score=254.57 Aligned_cols=156 Identities=29% Similarity=0.478 Sum_probs=139.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..++||+|+||.||+|+.. +|+.||||.+ ..|++++++++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888999999999999999965 7899999843 4689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 264 LEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
|||++||+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999997653 34899999999999999999999 889999999999999999999999999999987543
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. .....+||+.||||
T Consensus 340 ~---~~~~~~GT~~Y~AP 354 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAP 354 (576)
T ss_dssp C---CEECCCSCGGGCCH
T ss_pred c---cccccCCCccccCH
Confidence 3 23346899999998
No 54
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=5.4e-30 Score=242.06 Aligned_cols=157 Identities=26% Similarity=0.324 Sum_probs=136.8
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcC-CCCCeeEEEEEecCCCeEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSI-HHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 261 (360)
..++|+..++||+|+||.||+|+.+ +++.||||.+ ..|..++..+ +||+|+++++++++.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3568999999999999999999975 5788999843 3578888887 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||++||+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999997543 5889999999999999999999 88999999999999999999999999999986432
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. ......+||+.||||
T Consensus 174 ~~--~~~~~~~gt~~y~aP 190 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAP 190 (353)
T ss_dssp TT--CCBCCCCSCGGGCCH
T ss_pred CC--cccccccCCccccCh
Confidence 22 123456899999998
No 55
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.96 E-value=5e-30 Score=235.02 Aligned_cols=155 Identities=28% Similarity=0.468 Sum_probs=134.6
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
++|+..+.||+|+||.||+|+..+++.||+|. +.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46788899999999999999988899999984 34799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 985 999999876667899999999999999999999 8899999999999999999999999999998765322 1
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (288)
T 1ob3_A 156 KYTHEIVTLWYRAP 169 (288)
T ss_dssp ------CCCTTCCH
T ss_pred ccccccccccccCc
Confidence 22345789999998
No 56
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=5.3e-30 Score=237.66 Aligned_cols=156 Identities=31% Similarity=0.539 Sum_probs=127.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|+..+.||+|+||.||+|+. +++.||||. +.+|++++++++||||+++++++...+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 35678889999999999999987 578899974 4579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 266 YMTNGSLEKVLYSSNC--ILDILQRLNIMINVTSALEYLHFGFSTP--IIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~yLH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
|+++|+|.+++..... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 9999999999976532 3889999999999999999999 778 99999999999999999999999999986543
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. .......||+.|+||
T Consensus 192 ~~--~~~~~~~gt~~y~aP 208 (309)
T 3p86_A 192 TF--LSSKSAAGTPEWMAP 208 (309)
T ss_dssp ------------CCTTSCH
T ss_pred cc--cccccCCCCccccCh
Confidence 22 123356799999998
No 57
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=1.4e-29 Score=242.07 Aligned_cols=156 Identities=24% Similarity=0.432 Sum_probs=138.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
.+.|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++|||||++++++.+++..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457889999999999999999864 788999974 45799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC--CCcEEEeecccccccCCCCC
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD--NIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~--~~~~ki~DFGla~~~~~~~~ 344 (360)
+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+++.+....
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999876667899999999999999999999 889999999999999974 5789999999999875433
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 206 --~~~~~~gt~~y~aP 219 (387)
T 1kob_A 206 --IVKVTTATAEFAAP 219 (387)
T ss_dssp --CEEEECSSGGGCCH
T ss_pred --ceeeeccCCCccCc
Confidence 22345799999998
No 58
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=3.4e-30 Score=243.10 Aligned_cols=166 Identities=25% Similarity=0.423 Sum_probs=139.4
Q ss_pred HHHHHHHhCCCCCCCeeccCCCccEEEEEc------cCCcEEEehh------------hHHHHHHhhcC-CCCCeeEEEE
Q 040294 192 YLELLRATNGFSANNLIGRGSFGSVYKARL------QDGMEFAIKS------------FDVECEVMKSI-HHRNLVKIIS 252 (360)
Q Consensus 192 ~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~------------~~~E~~~l~~l-~hpniv~l~~ 252 (360)
..+.....++|+..+.||+|+||.||+|++ .+++.||||. +.+|+++++++ +|||||++++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~ 93 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 93 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence 344444567899999999999999999973 3567899984 56799999999 7999999999
Q ss_pred EecCCC-eEEEEEEccCCCCHHHHHhcCCC--------------------------------------------------
Q 040294 253 SCSNED-FRALVLEYMTNGSLEKVLYSSNC-------------------------------------------------- 281 (360)
Q Consensus 253 ~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~-------------------------------------------------- 281 (360)
+|...+ ..++||||+++|+|.+++.....
T Consensus 94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (359)
T 3vhe_A 94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173 (359)
T ss_dssp EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence 998765 48999999999999999976432
Q ss_pred ---------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 282 ---------------ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 282 ---------------~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
.+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 250 (359)
T 3vhe_A 174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 250 (359)
T ss_dssp ----------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence 1888899999999999999999 8899999999999999999999999999999765444333
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 251 ~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 251 RKGDARLPLKWMAP 264 (359)
T ss_dssp EC--CEECGGGCCH
T ss_pred hccccCCCceeECh
Confidence 44556789999998
No 59
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.96 E-value=5.1e-30 Score=240.30 Aligned_cols=160 Identities=29% Similarity=0.486 Sum_probs=137.3
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc------CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCe
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDF 259 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~ 259 (360)
..++|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||++++++|..++.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 4567899999999999999999864 347899984 4579999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCC
Q 040294 260 RALVLEYMTNGSLEKVLYSSN-----------------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLK 316 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk 316 (360)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 999999999999999997632 45889999999999999999999 8899999999
Q ss_pred CCceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 317 PHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 317 ~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|+||+++.++.+||+|||+++...............||+.|+||
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 245 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecCh
Confidence 99999999999999999999876533222223345689999998
No 60
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.96 E-value=1.1e-29 Score=237.43 Aligned_cols=158 Identities=25% Similarity=0.359 Sum_probs=138.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh---------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS---------FDVECEVMKSI-HHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~---------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +..|+++++++ +||||+++++++..++..++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 35788899999999999999995 5789999983 56899999999 9999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc-----EEEeecccccccCCC
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV-----AHLSDFGIAKLLTGE 342 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~-----~ki~DFGla~~~~~~ 342 (360)
+++|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++.+...
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 99999999876667999999999999999999999 889999999999999998887 999999999976543
Q ss_pred CCce-----eeecccccCcccCC
Q 040294 343 DQSM-----TQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~-----~~~~~~gt~~Y~aP 360 (360)
.... ......||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aP 186 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSI 186 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCH
T ss_pred CCCccccccccCCcCCCccccCh
Confidence 2211 12356799999998
No 61
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96 E-value=1.6e-29 Score=231.93 Aligned_cols=155 Identities=26% Similarity=0.426 Sum_probs=135.6
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
++|+..+.||+|+||.||+|+.. +++.||||.+ .+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888899999999999999964 7889999843 469999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++ ++.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9975 676666665667999999999999999999999 88999999999999999999999999999987653321
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 157 -~~~~~~~t~~y~aP 170 (292)
T 3o0g_A 157 -CYSAEVVTLWYRPP 170 (292)
T ss_dssp -CCCSCCSCGGGCCH
T ss_pred -cccCCccccCCcCh
Confidence 23345789999998
No 62
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=8e-30 Score=242.60 Aligned_cols=156 Identities=33% Similarity=0.432 Sum_probs=132.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHH-hhcCCCCCeeEEEEEecCCCeEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEV-MKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~-l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
.++|+..++||+|+||.||+|+.+ +++.||||.+ ..|..+ ++.++|||||+++++|.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999965 6888999854 234444 567899999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||++||+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999764 35788888999999999999999 899999999999999999999999999999874332
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. ......+||+.||||
T Consensus 193 ~--~~~~~~~gt~~y~aP 208 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAP 208 (373)
T ss_dssp C--CCCCSBSCCCCCCCH
T ss_pred C--CccccccCCccccCH
Confidence 2 123456899999998
No 63
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.96 E-value=4.4e-30 Score=234.44 Aligned_cols=158 Identities=27% Similarity=0.465 Sum_probs=136.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
.++|+..+.||+|+||.||+|++.++..||||. +.+|++++++++||||+++++++.+++..++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 346778899999999999999998888999984 4679999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCceee
Q 040294 269 NGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 348 (360)
Q Consensus 269 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~ 348 (360)
+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 178 (283)
T 3gen_A 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSS 178 (283)
T ss_dssp TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-cccc
Confidence 99999999875567899999999999999999999 8999999999999999999999999999998764322 1122
Q ss_pred ecccccCcccCC
Q 040294 349 TQTLATIGYMAP 360 (360)
Q Consensus 349 ~~~~gt~~Y~aP 360 (360)
....+|+.|+||
T Consensus 179 ~~~~~~~~y~aP 190 (283)
T 3gen_A 179 VGSKFPVRWSPP 190 (283)
T ss_dssp TSTTSCGGGCCH
T ss_pred cCCccCcccCCH
Confidence 234578889998
No 64
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=7.6e-30 Score=238.42 Aligned_cols=156 Identities=29% Similarity=0.451 Sum_probs=131.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEc----cCCcEEEehhh---------------HHHHHHhhcCCCCCeeEEEEEecCCCe
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL----QDGMEFAIKSF---------------DVECEVMKSIHHRNLVKIISSCSNEDF 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~---------------~~E~~~l~~l~hpniv~l~~~~~~~~~ 259 (360)
.++|+..+.||+|+||.||+++. .+++.||+|.+ ..|++++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688899999999999999986 47889999843 358999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
.++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999999754 35788889999999999999999 889999999999999999999999999999865
Q ss_pred CCCCCceeeecccccCcccCC
Q 040294 340 TGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ......+||+.|+||
T Consensus 172 ~~~~--~~~~~~~gt~~y~aP 190 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAP 190 (327)
T ss_dssp ---------CTTSSCCTTSCH
T ss_pred ccCC--ccccccCCCcCccCH
Confidence 3322 123356799999998
No 65
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=1.7e-29 Score=250.61 Aligned_cols=157 Identities=31% Similarity=0.471 Sum_probs=138.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|...++||+|+||.||+|+.+ +|+.||+|.+ ..|++++++++|||||+++++|.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 357888899999999999999975 7899999843 4589999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 264 LEYMTNGSLEKVLYSS---NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
|||++||+|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999998754 245899999999999999999999 8999999999999999999999999999999865
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... .....+||+.||||
T Consensus 341 ~~~~--~~~~~~GT~~Y~AP 358 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAP 358 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCH
T ss_pred CCCc--ccccccCCccccCh
Confidence 4331 22345899999998
No 66
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=233.16 Aligned_cols=155 Identities=30% Similarity=0.483 Sum_probs=133.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------------------------------hHHHHHHhh
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------------------------------FDVECEVMK 240 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------------------------------~~~E~~~l~ 240 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788899999999999999985 4788899984 346999999
Q ss_pred cCCCCCeeEEEEEecC--CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCC
Q 040294 241 SIHHRNLVKIISSCSN--EDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPH 318 (360)
Q Consensus 241 ~l~hpniv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~ 318 (360)
+++||||+++++++.+ ++..++||||+++++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 5689999999999999886543 35889999999999999999999 889999999999
Q ss_pred ceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 319 NVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 319 NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+++.++.+||+|||+++....... ......||+.|+||
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aP 206 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAP 206 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCG
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccCh
Confidence 99999999999999999987654332 23346799999998
No 67
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.96 E-value=2.5e-29 Score=233.75 Aligned_cols=156 Identities=28% Similarity=0.442 Sum_probs=122.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467889999999999999999864 689999984 4579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 266 YMTNGSLEKVLYSSN-----CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
|++ |+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886432 35888899999999999999999 8899999999999999999999999999998765
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ......||+.|+||
T Consensus 160 ~~~~--~~~~~~~t~~y~aP 177 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAP 177 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCH
T ss_pred CCcc--cCCCCcccccccCc
Confidence 3321 22345789999998
No 68
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.96 E-value=9e-30 Score=237.52 Aligned_cols=157 Identities=25% Similarity=0.421 Sum_probs=132.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcE----EEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGME----FAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
++|+..+.||+|+||.||+|++. +++. ||+|. +..|+.++++++||||++++++|.. +..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEE
Confidence 46788899999999999999864 4444 67763 4579999999999999999999974 55889
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999876667888899999999999999999 889999999999999999999999999999987655
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
..........||+.|+||
T Consensus 169 ~~~~~~~~~~~~~~y~aP 186 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMAL 186 (325)
T ss_dssp TTCCC-----CCTTTSCH
T ss_pred cccccccCCCCcccccCh
Confidence 433334456788999998
No 69
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.96 E-value=3.3e-29 Score=232.02 Aligned_cols=156 Identities=28% Similarity=0.500 Sum_probs=129.9
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEeh-------------hhHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIK-------------SFDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK-------------~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|...+.||+|+||.||+|+... .+|+| .+.+|++++++++||||+++++++..+ ..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-NLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-SCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC-cEEEEEe
Confidence 4578889999999999999998754 46654 356799999999999999999988654 5789999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999999877778999999999999999999999 889999999999999999999999999999865432222
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
.......||+.|+||
T Consensus 189 ~~~~~~~gt~~y~aP 203 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAP 203 (307)
T ss_dssp -----CCCCTTSCCH
T ss_pred ccccCCCCCcceECc
Confidence 233456799999998
No 70
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.96 E-value=8e-30 Score=236.50 Aligned_cols=154 Identities=27% Similarity=0.333 Sum_probs=131.1
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh-------------HHHHHHhhc-CCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF-------------DVECEVMKS-IHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~-------------~~E~~~l~~-l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
++|+..+.||+|+||.||+|+.. +++.||||.+ ..|+..+.+ .+||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46888999999999999999975 7999999853 224444444 48999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 67999998877667999999999999999999999 8899999999999999999999999999998764332
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
......||++|+||
T Consensus 212 --~~~~~~gt~~y~aP 225 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAP 225 (311)
T ss_dssp -----CCCCCGGGCCG
T ss_pred --CCcccCCCccccCH
Confidence 22345699999998
No 71
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.3e-30 Score=244.76 Aligned_cols=158 Identities=25% Similarity=0.454 Sum_probs=134.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc------CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 261 (360)
++|+..+.||+|+||.||+|++. ++..||||. +.+|+.++++++|||||++++++..++..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 46778899999999999999843 466899985 456999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC---cEEEee
Q 040294 262 LVLEYMTNGSLEKVLYSSN------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI---VAHLSD 332 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~D 332 (360)
+||||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997543 35889999999999999999999 89999999999999999554 599999
Q ss_pred cccccccCCCCCceeeecccccCcccCC
Q 040294 333 FGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 333 FGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+++.+.............||+.|+||
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPP 255 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCH
T ss_pred CccccccccccccccCCCcCCcccEECH
Confidence 9999865432222223345789999998
No 72
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.3e-29 Score=237.82 Aligned_cols=154 Identities=27% Similarity=0.455 Sum_probs=136.4
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|...+.||+|+||.||+|+. .+++.||||. +.+|+++++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35788899999999999999996 5789999983 45799999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+ +|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 88 ~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 78999988654 35889999999999999999999 8899999999999999999999999999998765432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
.....+||+.|+||
T Consensus 163 ---~~~~~~gt~~y~aP 176 (336)
T 3h4j_B 163 ---FLKTSCGSPNYAAP 176 (336)
T ss_dssp ---TTCCCTTSTTTSCG
T ss_pred ---ccccccCCcCcCCH
Confidence 22345799999998
No 73
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.96 E-value=1.6e-29 Score=239.57 Aligned_cols=155 Identities=26% Similarity=0.509 Sum_probs=136.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|..+ +++.||+|. +.+|++++++++|||||++++++.+++..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456888999999999999999864 789999984 346999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC---CcEEEeecccccccCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN---IVAHLSDFGIAKLLTG 341 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DFGla~~~~~ 341 (360)
||+++|+|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||+++....
T Consensus 108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999998754 45889999999999999999999 8899999999999999864 4599999999987653
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. ......||+.|+||
T Consensus 184 ~~---~~~~~~gt~~y~aP 199 (362)
T 2bdw_A 184 SE---AWHGFAGTPGYLSP 199 (362)
T ss_dssp CC---SCCCSCSCTTTCCH
T ss_pred Cc---ccccCCCCccccCH
Confidence 32 22346799999998
No 74
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=245.72 Aligned_cols=157 Identities=25% Similarity=0.422 Sum_probs=136.2
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
..++|+..+.||+|+||.||+|.. .+|+.||+|. +.+|++++++++|||||++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 345788899999999999999985 4788999873 45799999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec---CCCcEEEeecccccccC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD---DNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DFGla~~~~ 340 (360)
|||+++|+|.+.+.... .+++..+..++.|++.||+||| +.+|+||||||+|||++ +++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999987653 5889999999999999999999 89999999999999998 56889999999998765
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ......||++|+||
T Consensus 165 ~~~~--~~~~~~gt~~Y~AP 182 (444)
T 3soa_A 165 GEQQ--AWFGFAGTPGYLSP 182 (444)
T ss_dssp TTCC--BCCCSCSCGGGCCH
T ss_pred CCCc--eeecccCCcccCCH
Confidence 4432 22356799999998
No 75
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.96 E-value=6.4e-30 Score=248.93 Aligned_cols=156 Identities=29% Similarity=0.390 Sum_probs=132.4
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh--------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF--------------DVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~--------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+. .+++.||||.+ ..|+++++.++||||++++++|...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45788899999999999999985 47899999853 3478889999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCC-CCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFS-TPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~-~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
|||+++|+|.+++... ..+++..+..++.|++.||+||| + .+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999999764 35889999999999999999999 7 89999999999999999999999999999864432
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. ......+||++||||
T Consensus 303 ~--~~~~~~~gt~~y~aP 318 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAP 318 (446)
T ss_dssp ------CCSSSCGGGCCH
T ss_pred C--cccccccCCccccCH
Confidence 2 223457899999998
No 76
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.96 E-value=3.2e-29 Score=245.47 Aligned_cols=155 Identities=26% Similarity=0.473 Sum_probs=138.4
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|...+.||+|+||.||+|+.. +|+.||||. +.+|+++++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 356888899999999999999965 799999984 34689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999999754 46899999999999999999999 8999999999999999999999999999999865432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
.....+||+.|+||
T Consensus 171 ---~~~~~~gt~~y~aP 184 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAP 184 (476)
T ss_dssp ---CBCCCCSCSTTCCH
T ss_pred ---cccccCCCcCeECh
Confidence 22346799999998
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.96 E-value=1.6e-29 Score=238.58 Aligned_cols=156 Identities=26% Similarity=0.449 Sum_probs=135.1
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh----------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS----------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~----------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
+.|+..+.||+|+||.||+|+.+ +++.||||. +.+|+++++.++|||||++++++.+++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 45888899999999999999864 789999984 3579999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc---EEEeecccc
Q 040294 263 VLEYMTNGSLEKVLYSS---NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV---AHLSDFGIA 336 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DFGla 336 (360)
||||+++|+|.+.+... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998887542 335789999999999999999999 899999999999999986554 999999999
Q ss_pred cccCCCCCceeeecccccCcccCC
Q 040294 337 KLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 337 ~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+...... ......+||+.|+||
T Consensus 181 ~~~~~~~--~~~~~~~gt~~y~aP 202 (351)
T 3c0i_A 181 IQLGESG--LVAGGRVGTPHFMAP 202 (351)
T ss_dssp EECCTTS--CBCCCCCSCGGGCCH
T ss_pred eEecCCC--eeecCCcCCcCccCH
Confidence 8875432 123346799999998
No 78
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=1.6e-29 Score=240.59 Aligned_cols=150 Identities=27% Similarity=0.480 Sum_probs=128.4
Q ss_pred CCeeccCCCccEEEEEc-cCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCCCCH
Q 040294 205 NNLIGRGSFGSVYKARL-QDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTNGSL 272 (360)
Q Consensus 205 ~~~iG~G~~g~Vy~~~~-~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 272 (360)
.+.||+|+||.||+|+. .+|+.||+|. +.+|++++++++|||||+++++|...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56799999999999986 4789999983 46799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee--cCCCcEEEeecccccccCCCCCceeeec
Q 040294 273 EKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL--DDNIVAHLSDFGIAKLLTGEDQSMTQTQ 350 (360)
Q Consensus 273 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl--~~~~~~ki~DFGla~~~~~~~~~~~~~~ 350 (360)
.+++......+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+.... ....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~~ 247 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKV 247 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cccc
Confidence 9999776667899999999999999999999 8899999999999999 567899999999999875433 2234
Q ss_pred ccccCcccCC
Q 040294 351 TLATIGYMAP 360 (360)
Q Consensus 351 ~~gt~~Y~aP 360 (360)
..||++|+||
T Consensus 248 ~~gt~~y~aP 257 (373)
T 2x4f_A 248 NFGTPEFLAP 257 (373)
T ss_dssp CCSSCTTCCH
T ss_pred ccCCCcEeCh
Confidence 5799999998
No 79
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=1.6e-29 Score=237.19 Aligned_cols=159 Identities=25% Similarity=0.456 Sum_probs=137.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEc------cCCcEEEehh------------hHHHHHHhhcC-CCCCeeEEEEEecCCCe
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL------QDGMEFAIKS------------FDVECEVMKSI-HHRNLVKIISSCSNEDF 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~------------~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 259 (360)
.++|...+.||+|+||.||+|+. .++..||||. +.+|+++++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 45788889999999999999985 2456799974 45799999999 89999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCCC----------------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCC
Q 040294 260 RALVLEYMTNGSLEKVLYSSNC----------------------ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKP 317 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~ 317 (360)
.++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCh
Confidence 9999999999999999976532 3788899999999999999999 89999999999
Q ss_pred CceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 318 HNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 318 ~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+||+++.++.+||+|||+++...............||+.|+||
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 243 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP 243 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence 9999999999999999999876544433334456688999998
No 80
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.96 E-value=2e-29 Score=238.84 Aligned_cols=155 Identities=26% Similarity=0.351 Sum_probs=128.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+++.. +++.||||. +.+|+.++++++|||||++++++.+.+..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 457888999999999999999965 789999984 457999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc--EEEeecccccccCCCCCc
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV--AHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~--~ki~DFGla~~~~~~~~~ 345 (360)
++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++......
T Consensus 99 ~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-- 172 (361)
T 3uc3_A 99 SGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-- 172 (361)
T ss_dssp CSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--
Confidence 9999999987543 5889999999999999999999 899999999999999987765 9999999998543222
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
.....+||+.|+||
T Consensus 173 -~~~~~~gt~~y~aP 186 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAP 186 (361)
T ss_dssp ---------CTTSCH
T ss_pred -CCCCCcCCCCcCCh
Confidence 22345799999998
No 81
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=241.68 Aligned_cols=158 Identities=28% Similarity=0.460 Sum_probs=136.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc--------CCcEEEehh------------hHHHHHHhhcC-CCCCeeEEEEEecCCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ--------DGMEFAIKS------------FDVECEVMKSI-HHRNLVKIISSCSNED 258 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~--------~~~~vavK~------------~~~E~~~l~~l-~hpniv~l~~~~~~~~ 258 (360)
++|...+.||+|+||.||+|+.. ++..||||. +.+|+++++++ +|||||+++++|..++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 56778899999999999999852 235799974 45799999999 8999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec
Q 040294 259 FRALVLEYMTNGSLEKVLYSSN---------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD 323 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~ 323 (360)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEc
Confidence 9999999999999999997643 34899999999999999999999 88999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 324 DNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 324 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.++.+||+|||+++...............||+.|+||
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 262 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence 9999999999999977544322333445688999998
No 82
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.96 E-value=2.1e-29 Score=233.09 Aligned_cols=159 Identities=26% Similarity=0.450 Sum_probs=137.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEc------cCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL------QDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 260 (360)
.++|...+.||+|+||.||+|+. .+++.||||. +.+|++++++++||||+++++++..++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 35677889999999999999985 2457899984 35699999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCC
Q 040294 261 ALVLEYMTNGSLEKVLYSSN-----------------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKP 317 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~ 317 (360)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999997643 23788899999999999999999 88999999999
Q ss_pred CceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 318 HNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 318 ~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+||+++.++.+||+|||+++...............+|+.|+||
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 221 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI 221 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccCh
Confidence 9999999999999999999877554433333445678899998
No 83
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.96 E-value=4.1e-29 Score=233.38 Aligned_cols=154 Identities=27% Similarity=0.441 Sum_probs=136.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------------FDVECEVMKSIHHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 261 (360)
+.|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++.+++..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45788899999999999999965 688999973 457999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC----cEEEeeccccc
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI----VAHLSDFGIAK 337 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~DFGla~ 337 (360)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999999999654 46889999999999999999999 89999999999999999877 89999999998
Q ss_pred ccCCCCCceeeecccccCcccCC
Q 040294 338 LLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 338 ~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.+.... ......||+.|+||
T Consensus 167 ~~~~~~---~~~~~~gt~~y~aP 186 (326)
T 2y0a_A 167 KIDFGN---EFKNIFGTPEFVAP 186 (326)
T ss_dssp ECCTTS---CCCCCCSCTTTCCH
T ss_pred ECCCCC---ccccccCCcCcCCc
Confidence 865332 12345799999998
No 84
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.5e-29 Score=233.77 Aligned_cols=155 Identities=29% Similarity=0.473 Sum_probs=135.1
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCC--eEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNED--FRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 264 (360)
+.|...+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45788899999999999999965 689999984 347999999999999999999987655 789999
Q ss_pred EccCCCCHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee----cCCCcEEEeecccccc
Q 040294 265 EYMTNGSLEKVLYSSNC--ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL----DDNIVAHLSDFGIAKL 338 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DFGla~~ 338 (360)
||+++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999976432 3899999999999999999999 8899999999999999 7888999999999998
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
...... .....||+.|+||
T Consensus 166 ~~~~~~---~~~~~gt~~y~aP 184 (319)
T 4euu_A 166 LEDDEQ---FVSLYGTEEYLHP 184 (319)
T ss_dssp CCTTCC---BCCCCSCGGGCCH
T ss_pred cCCCCc---eeecccCCCccCH
Confidence 754432 2345799999998
No 85
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.96 E-value=1e-29 Score=237.38 Aligned_cols=157 Identities=27% Similarity=0.446 Sum_probs=131.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcE----EEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGME----FAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
++|+..+.||+|+||.||+|++. +++. ||+|. +.+|++++++++||||++++++|..++ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46888899999999999999854 4443 57763 456999999999999999999998865 789
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
|+||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999887778999999999999999999999 889999999999999999999999999999987655
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
..........||+.|+||
T Consensus 171 ~~~~~~~~~~~t~~y~aP 188 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp CC-------CCCGGGSCH
T ss_pred cccccccCCCccccccCh
Confidence 433334455678899998
No 86
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.96 E-value=1.7e-29 Score=249.12 Aligned_cols=158 Identities=29% Similarity=0.524 Sum_probs=138.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+|++. ++..||||. |.+|++++++++|||||+++++|..++..++|||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 346778899999999999999976 488999984 567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 268 TNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 268 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.... ..
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 374 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YT 374 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-EE
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-ee
Confidence 999999999864 345889999999999999999999 8999999999999999999999999999999875433 22
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......+|+.|+||
T Consensus 375 ~~~~~~~~~~y~aP 388 (495)
T 1opk_A 375 AHAGAKFPIKWTAP 388 (495)
T ss_dssp CCTTCCCCGGGCCH
T ss_pred ecCCCcCCcceeCH
Confidence 22345578899998
No 87
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.96 E-value=2.6e-29 Score=245.30 Aligned_cols=157 Identities=27% Similarity=0.442 Sum_probs=122.4
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecC-----CCe
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSN-----EDF 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~-----~~~ 259 (360)
.++|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++|||||+++++|.. .+.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367899999999999999999864 789999984 3469999999999999999999943 357
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
.|+||||+ +|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 57999998754 46889999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCc-------------------------eeeecccccCcccCC
Q 040294 340 TGEDQS-------------------------MTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~-------------------------~~~~~~~gt~~Y~aP 360 (360)
...... ...+..+||++||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 252 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCH
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccCh
Confidence 432110 122456789999998
No 88
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.96 E-value=4e-29 Score=234.43 Aligned_cols=156 Identities=28% Similarity=0.417 Sum_probs=137.7
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------------hHHHHHHhhcCCCCCeeEEEEEecCC
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------------FDVECEVMKSIHHRNLVKIISSCSNE 257 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------------~~~E~~~l~~l~hpniv~l~~~~~~~ 257 (360)
..++|+..+.||+|+||.||+|+. .+++.||||. +..|++++++++||||++++++|.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 345788999999999999999985 5788999984 34599999999999999999999999
Q ss_pred CeEEEEEEccCCC-CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccc
Q 040294 258 DFRALVLEYMTNG-SLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIA 336 (360)
Q Consensus 258 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla 336 (360)
+..++||||+.+| +|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 999999764 35889999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCCCceeeecccccCcccCC
Q 040294 337 KLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 337 ~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.+..... .....||+.|+||
T Consensus 178 ~~~~~~~~---~~~~~gt~~y~aP 198 (335)
T 3dls_A 178 AYLERGKL---FYTFCGTIEYCAP 198 (335)
T ss_dssp EECCTTCC---BCEECSCGGGCCH
T ss_pred eECCCCCc---eeccCCCccccCh
Confidence 98754332 2345799999998
No 89
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=1.5e-29 Score=232.48 Aligned_cols=158 Identities=29% Similarity=0.496 Sum_probs=131.1
Q ss_pred CCCCCCCeeccCCCccEEEEEc-----cCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCC--CeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-----QDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNE--DFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 261 (360)
++|+..+.||+|+||.||+|++ .+++.||||. +.+|++++++++||||++++++|... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4677889999999999999984 3688999984 46799999999999999999998653 4589
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999999999876666899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCc-eeeecccccCcccCC
Q 040294 342 EDQS-MTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~-~~~~~~~gt~~Y~aP 360 (360)
.... .......+|..|+||
T Consensus 167 ~~~~~~~~~~~~~~~~y~aP 186 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAP 186 (295)
T ss_dssp ---------CTTCGGGGCCH
T ss_pred CcceeeeccCCCCccceeCc
Confidence 3321 122334578889998
No 90
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.96 E-value=6.5e-29 Score=253.30 Aligned_cols=157 Identities=26% Similarity=0.324 Sum_probs=137.1
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHHHHHhhcC-CCCCeeEEEEEecCCCeEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVECEVMKSI-HHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 261 (360)
..++|+..++||+|+||.||+|+.+ +++.||||.+ ..|..++..+ +||+|+++++++++.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4567899999999999999999965 6888999853 3477788877 7999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999997643 5889999999999999999999 89999999999999999999999999999996443
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. ......+||+.||||
T Consensus 495 ~~--~~~~~~~GT~~Y~AP 511 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAP 511 (674)
T ss_dssp TT--CCBCCCCSCSSSCCH
T ss_pred CC--cccccccCCCcccCH
Confidence 32 223457899999998
No 91
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.96 E-value=5.8e-29 Score=228.74 Aligned_cols=159 Identities=28% Similarity=0.444 Sum_probs=132.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehhh--------HHHHHHhhc--CCCCCeeEEEEEecC----CCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF--------DVECEVMKS--IHHRNLVKIISSCSN----EDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~--------~~E~~~l~~--l~hpniv~l~~~~~~----~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+. +++.||||.+ ..|.+++.. ++||||+++++++.. ....++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 45788899999999999999988 6889999854 346666655 899999999998653 35689999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFG-----FSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~-----~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
||+++|+|.+++.. ..+++..+..++.|++.||+|||.. ++.+|+||||||+|||++.++.+||+|||+++..
T Consensus 86 e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 86 HYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp CCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred hhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 99999999999954 3589999999999999999999932 2678999999999999999999999999999876
Q ss_pred CCCCCce--eeecccccCcccCC
Q 040294 340 TGEDQSM--TQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~~--~~~~~~gt~~Y~aP 360 (360)
....... ......||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aP 186 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAP 186 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCH
T ss_pred ccccccccccccccccccceeCh
Confidence 5443221 12234799999998
No 92
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.96 E-value=2.5e-29 Score=232.52 Aligned_cols=158 Identities=27% Similarity=0.468 Sum_probs=137.4
Q ss_pred CCCCCCCeeccCCCccEEEEEc------cCCcEEEehh------------hHHHHHHhhcC-CCCCeeEEEEEecCCCeE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL------QDGMEFAIKS------------FDVECEVMKSI-HHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~------------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 260 (360)
++|+..+.||+|+||.||+|+. .+++.||||. +.+|+++++++ +||||+++++++..++..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 5678889999999999999984 3567899984 45799999999 899999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCC-----------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec
Q 040294 261 ALVLEYMTNGSLEKVLYSSNC-----------------ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD 323 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~ 323 (360)
++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEc
Confidence 999999999999999976532 3889999999999999999999 88999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 324 DNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 324 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.++.+||+|||+++...............||+.|+||
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 216 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeCh
Confidence 9999999999999887654433333445688899998
No 93
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.96 E-value=5.8e-29 Score=232.80 Aligned_cols=159 Identities=27% Similarity=0.496 Sum_probs=135.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEc--------cCCcEEEehh------------hHHHHHHhhcC-CCCCeeEEEEEecCC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL--------QDGMEFAIKS------------FDVECEVMKSI-HHRNLVKIISSCSNE 257 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~--------~~~~~vavK~------------~~~E~~~l~~l-~hpniv~l~~~~~~~ 257 (360)
.++|...+.||+|+||.||+|+. .++..||||. +.+|+++++++ +||||++++++|..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 35688889999999999999985 3467899984 45689999999 899999999999999
Q ss_pred CeEEEEEEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee
Q 040294 258 DFRALVLEYMTNGSLEKVLYSSN---------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL 322 (360)
Q Consensus 258 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl 322 (360)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999997643 23788999999999999999999 8899999999999999
Q ss_pred cCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 323 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 323 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.++.+||+|||+++...............+|+.|+||
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 228 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeCh
Confidence 99999999999999877654332233345678899998
No 94
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.96 E-value=6.8e-29 Score=225.96 Aligned_cols=157 Identities=29% Similarity=0.494 Sum_probs=128.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688899999999999999986 5789999984 34689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999876667899999999999999999999 8899999999999999999999999999998765332
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
. ......||+.|+||
T Consensus 167 ~--~~~~~~~~~~y~aP 181 (278)
T 3cok_A 167 E--KHYTLCGTPNYISP 181 (278)
T ss_dssp -----------------
T ss_pred C--cceeccCCCCcCCc
Confidence 1 12345789999998
No 95
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.96 E-value=1.3e-29 Score=247.22 Aligned_cols=157 Identities=24% Similarity=0.484 Sum_probs=135.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
.++|+..+.||+|+||.||+|++.++..||||. |.+|++++++++|||||++++++. .+..++||||++
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 456788899999999999999998888999983 568999999999999999999987 556899999999
Q ss_pred CCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 269 NGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 269 ~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
+|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~~ 341 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTA 341 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HHT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-eec
Confidence 999999997542 25788889999999999999999 8899999999999999999999999999999764321 111
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
.....+|+.|+||
T Consensus 342 ~~~~~~~~~y~aP 354 (454)
T 1qcf_A 342 REGAKFPIKWTAP 354 (454)
T ss_dssp TCSSSSCGGGSCH
T ss_pred cCCCcccccccCH
Confidence 2334578899998
No 96
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.96 E-value=6.1e-29 Score=228.85 Aligned_cols=157 Identities=25% Similarity=0.488 Sum_probs=136.1
Q ss_pred CCCCCCeeccCCCccEEEEEc-----cCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCC--CeEE
Q 040294 201 GFSANNLIGRGSFGSVYKARL-----QDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNE--DFRA 261 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 261 (360)
.|+..+.||+|+||.||+|++ .+++.||||. +.+|++++++++||||+++++++... +..+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 467789999999999999983 4688999984 45799999999999999999999877 6689
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 102 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 999999999999999766667899999999999999999999 89999999999999999999999999999998765
Q ss_pred CCCc-eeeecccccCcccCC
Q 040294 342 EDQS-MTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~-~~~~~~~gt~~Y~aP 360 (360)
.... .......||..|+||
T Consensus 179 ~~~~~~~~~~~~~~~~y~aP 198 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAP 198 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCH
T ss_pred CCcceeccCCCCCCccccCC
Confidence 4322 223345688899998
No 97
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.96 E-value=3.8e-29 Score=235.85 Aligned_cols=155 Identities=26% Similarity=0.438 Sum_probs=125.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
.+.|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||++++++|...+..++||||++
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 467888999999999999999975 678899984 4569999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC---CCcEEEeecccccccCCCCCc
Q 040294 269 NGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---NIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 269 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DFGla~~~~~~~~~ 345 (360)
+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+++......
T Consensus 132 ~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-- 205 (349)
T 2w4o_A 132 GGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-- 205 (349)
T ss_dssp SCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----------
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc--
Confidence 99999999754 45889999999999999999999 889999999999999975 8899999999998764322
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 206 -~~~~~~gt~~y~aP 219 (349)
T 2w4o_A 206 -LMKTVCGTPGYCAP 219 (349)
T ss_dssp --------CGGGSCH
T ss_pred -ccccccCCCCccCH
Confidence 22346799999998
No 98
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.96 E-value=3.5e-29 Score=228.43 Aligned_cols=156 Identities=27% Similarity=0.444 Sum_probs=123.1
Q ss_pred CCCCCCCeeccCCCccEEEEEccC----CcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQD----GMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
++|+..+.||+|+||.||+|+... +..||+|. +.+|+.++++++||||+++++++.+ +..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-CccEEE
Confidence 467788999999999999998642 45688874 4579999999999999999999854 568999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999999999877667899999999999999999999 8899999999999999999999999999998765432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
. .......+|+.|+||
T Consensus 171 ~-~~~~~~~~~~~y~aP 186 (281)
T 1mp8_A 171 Y-YKASKGKLPIKWMAP 186 (281)
T ss_dssp ---------CCGGGCCH
T ss_pred c-cccccCCCcccccCh
Confidence 1 122334578899998
No 99
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=2.7e-29 Score=226.96 Aligned_cols=157 Identities=28% Similarity=0.459 Sum_probs=138.4
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTN 269 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 269 (360)
++|+..+.||+|+||.||+|+..+++.||+|. +.+|++++++++||||+++++++.+++..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 46778899999999999999988888999984 46799999999999999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCceeee
Q 040294 270 GSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 349 (360)
Q Consensus 270 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~ 349 (360)
++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~ 163 (267)
T 3t9t_A 88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSST 163 (267)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTT
T ss_pred CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-ccccc
Confidence 9999999877667899999999999999999999 8899999999999999999999999999998764321 11222
Q ss_pred cccccCcccCC
Q 040294 350 QTLATIGYMAP 360 (360)
Q Consensus 350 ~~~gt~~Y~aP 360 (360)
...||+.|+||
T Consensus 164 ~~~~~~~y~aP 174 (267)
T 3t9t_A 164 GTKFPVKWASP 174 (267)
T ss_dssp STTCCGGGCCH
T ss_pred cccccccccCh
Confidence 34578889998
No 100
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.96 E-value=1.3e-28 Score=229.87 Aligned_cols=150 Identities=28% Similarity=0.408 Sum_probs=119.5
Q ss_pred CCeeccCCCccEEEEEcc-CCcEEEehh--------hHHHHHHhhcCC-CCCeeEEEEEecCCCeEEEEEEccCCCCHHH
Q 040294 205 NNLIGRGSFGSVYKARLQ-DGMEFAIKS--------FDVECEVMKSIH-HRNLVKIISSCSNEDFRALVLEYMTNGSLEK 274 (360)
Q Consensus 205 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~ 274 (360)
.+.||+|+||.||+|+.. +++.||||. +.+|+++++.+. ||||+++++++.+++..++||||+++|+|.+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE 95 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence 478999999999999965 789999984 356899999997 9999999999999999999999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC---cEEEeecccccccCCCCCceeeecc
Q 040294 275 VLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI---VAHLSDFGIAKLLTGEDQSMTQTQT 351 (360)
Q Consensus 275 ~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~DFGla~~~~~~~~~~~~~~~ 351 (360)
++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||+++....... .....
T Consensus 96 ~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~ 169 (325)
T 3kn6_A 96 RIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTP 169 (325)
T ss_dssp HHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred HHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--ccccc
Confidence 99765 46899999999999999999999 89999999999999997665 899999999987654322 23456
Q ss_pred cccCcccCC
Q 040294 352 LATIGYMAP 360 (360)
Q Consensus 352 ~gt~~Y~aP 360 (360)
+||+.|+||
T Consensus 170 ~~t~~y~aP 178 (325)
T 3kn6_A 170 CFTLHYAAP 178 (325)
T ss_dssp ---------
T ss_pred CCCcCccCH
Confidence 789999998
No 101
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.96 E-value=1.4e-29 Score=234.60 Aligned_cols=158 Identities=23% Similarity=0.462 Sum_probs=127.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCC----e
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNED----F 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~----~ 259 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|++++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35788899999999999999995 5789999984 357889999999999999999987654 3
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
.++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999997543 5889999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCc-eeeecccccCcccCC
Q 040294 340 TGEDQS-MTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~-~~~~~~~gt~~Y~aP 360 (360)
...... .......||+.|+||
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aP 188 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSP 188 (311)
T ss_dssp ---------------CCTTCCH
T ss_pred cccccccccccccCcCcccCCH
Confidence 543221 122345799999998
No 102
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.4e-29 Score=237.78 Aligned_cols=157 Identities=29% Similarity=0.426 Sum_probs=137.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEc----cCCcEEEehhh---------------HHHHHHhhcC-CCCCeeEEEEEecCCC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL----QDGMEFAIKSF---------------DVECEVMKSI-HHRNLVKIISSCSNED 258 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~----~~~~~vavK~~---------------~~E~~~l~~l-~hpniv~l~~~~~~~~ 258 (360)
.++|+..+.||+|+||.||+|+. .+++.||||.+ ..|+++++++ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999986 37889999853 3599999999 6999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999997643 5888999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.... .......+||+.|+||
T Consensus 209 ~~~~~-~~~~~~~~gt~~y~aP 229 (355)
T 1vzo_A 209 FVADE-TERAYDFCGTIEYMAP 229 (355)
T ss_dssp CCGGG-GGGGCGGGSCCTTCCH
T ss_pred cccCC-CCcccCcccCcCccCh
Confidence 64322 1223346799999998
No 103
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.96 E-value=6.1e-29 Score=233.83 Aligned_cols=156 Identities=28% Similarity=0.477 Sum_probs=135.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh-------HHHHHHhhcC-CCCCeeEEEEEecCCCeEEEEEEccCC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF-------DVECEVMKSI-HHRNLVKIISSCSNEDFRALVLEYMTN 269 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~-------~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~ 269 (360)
.++|+..+.||+|+||.||+|+.+ +++.||||.+ ..|++++.++ +||||+++++++.+++..++||||+++
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 456888999999999999999965 7889999854 5789988887 799999999999999999999999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC----CcEEEeecccccccCCCCCc
Q 040294 270 GSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN----IVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 270 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~----~~~ki~DFGla~~~~~~~~~ 345 (360)
|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||+.++ +.+||+|||+++.......
T Consensus 101 g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~- 175 (342)
T 2qr7_A 101 GELLDKILRQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG- 175 (342)
T ss_dssp CBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-
Confidence 9999999764 45889999999999999999999 8899999999999998432 3599999999997654332
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
.....+||+.|+||
T Consensus 176 -~~~~~~gt~~y~aP 189 (342)
T 2qr7_A 176 -LLMTPCYTANFVAP 189 (342)
T ss_dssp -CBCCSSCCSSCCCH
T ss_pred -ceeccCCCccccCH
Confidence 22346799999998
No 104
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.96 E-value=8e-29 Score=236.75 Aligned_cols=159 Identities=19% Similarity=0.284 Sum_probs=137.2
Q ss_pred hCCCCCCCeeccC--CCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 199 TNGFSANNLIGRG--SFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~~~iG~G--~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
.++|+..+.||+| +||.||+|+.. +++.||||. +.+|+++++.++|||||+++++|.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4568889999999 99999999965 789999984 3459999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 263 VLEYMTNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
|||||++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999764 245899999999999999999999 89999999999999999999999999999876432
Q ss_pred CCCc-----eeeecccccCcccCC
Q 040294 342 EDQS-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~-----~~~~~~~gt~~Y~aP 360 (360)
.... ......+||+.|+||
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aP 204 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSP 204 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCH
T ss_pred ccccccccccccccccccccccCH
Confidence 2110 111234789999998
No 105
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.95 E-value=5.9e-29 Score=234.50 Aligned_cols=150 Identities=32% Similarity=0.432 Sum_probs=134.1
Q ss_pred CCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 201 GFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.|+..+.||+|+||.||+|+. .+++.||||. +.+|++++++++|||||+++++|..++..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 477889999999999999995 5789999984 3579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+. |+|.+.+......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 ~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 135 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp CCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred cCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 997 6888888765667899999999999999999999 889999999999999999999999999999876432
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
....||+.|+||
T Consensus 208 ---~~~~gt~~y~aP 219 (348)
T 1u5q_A 208 ---NSFVGTPYWMAP 219 (348)
T ss_dssp ---CCCCSCGGGCCH
T ss_pred ---CcccCCcceeCH
Confidence 235799999998
No 106
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.95 E-value=7.4e-29 Score=240.51 Aligned_cols=157 Identities=28% Similarity=0.445 Sum_probs=132.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCC-----Ce
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNE-----DF 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~-----~~ 259 (360)
.++|...+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467888999999999999999864 688899984 34799999999999999999999876 57
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
.|+||||++ |+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 5999999754 45899999999999999999999 889999999999999999999999999999986
Q ss_pred CCCCCc--------------------eeeecccccCcccCC
Q 040294 340 TGEDQS--------------------MTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~--------------------~~~~~~~gt~~Y~aP 360 (360)
...... ...+..+||++|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 220 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP 220 (432)
T ss_dssp -------------------------------CCCCCTTCCH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCH
Confidence 543211 112456899999998
No 107
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=6.3e-29 Score=233.87 Aligned_cols=157 Identities=31% Similarity=0.520 Sum_probs=135.1
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh----------------HHHHHHhhcCCCCCeeEEEEEecCCCeE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF----------------DVECEVMKSIHHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~----------------~~E~~~l~~l~hpniv~l~~~~~~~~~~ 260 (360)
..++|+..+.||+|+||.||+|+.. +|+.||||.+ .+|++++++++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4567999999999999999999975 6899999854 3689999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
++||||+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 999999986 899998876667888889999999999999999 8899999999999999999999999999998765
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ......||+.|+||
T Consensus 164 ~~~~--~~~~~~~t~~y~aP 181 (346)
T 1ua2_A 164 SPNR--AYTHQVVTRWYRAP 181 (346)
T ss_dssp SCCC--CCCCSCCCCTTCCH
T ss_pred CCcc--cCCcccccccccCc
Confidence 3321 23346799999998
No 108
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.95 E-value=4.3e-29 Score=232.91 Aligned_cols=155 Identities=25% Similarity=0.446 Sum_probs=131.7
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF------------DVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
++|...+.||+|+||.||+|+.. +++.||||.+ .+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888899999999999999965 7899999854 3589999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
++ |+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999999877777899999999999999999999 8999999999999999999999999999998654332 1
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (324)
T 3mtl_A 156 TYDNEVVTLWYRPP 169 (324)
T ss_dssp -------CGGGCCH
T ss_pred ccccccCcccccCh
Confidence 23345789999998
No 109
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.95 E-value=5.4e-29 Score=234.02 Aligned_cols=155 Identities=25% Similarity=0.396 Sum_probs=130.5
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCCC--CCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIHH--RNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lv~ 264 (360)
+.|+..+.||+|+||.||++...+++.||||. +.+|++++++++| |||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 45888899999999999999988899999984 4569999999987 99999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
| +.+|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 89 e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp C-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred e-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 9 5688999999865 46888899999999999999999 88999999999999997 57899999999998754433
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
.......+||+.|+||
T Consensus 163 ~~~~~~~~gt~~y~aP 178 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPP 178 (343)
T ss_dssp -------CCCCSSCCH
T ss_pred cccCCCCcCCcCcCCH
Confidence 3333456799999998
No 110
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.95 E-value=3.7e-29 Score=237.08 Aligned_cols=158 Identities=20% Similarity=0.312 Sum_probs=130.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEccC------CcEEEehhh-------HH---------------HHHHhhcCCCCCeeEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQD------GMEFAIKSF-------DV---------------ECEVMKSIHHRNLVKI 250 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~------~~~vavK~~-------~~---------------E~~~l~~l~hpniv~l 250 (360)
.++|+..+.||+|+||.||+|++.. ++.||||.+ .. |+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999998754 478999852 22 3445667889999999
Q ss_pred EEEecCC----CeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec--C
Q 040294 251 ISSCSNE----DFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD--D 324 (360)
Q Consensus 251 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~--~ 324 (360)
++++... ...++||||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998764 4689999999 99999999877677999999999999999999999 88999999999999999 8
Q ss_pred CCcEEEeecccccccCCCCCc-----eeeecccccCcccCC
Q 040294 325 NIVAHLSDFGIAKLLTGEDQS-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 325 ~~~~ki~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~aP 360 (360)
++.+||+|||+++.+...... .......||+.||||
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 230 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI 230 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCH
Confidence 899999999999876533211 111345699999998
No 111
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.95 E-value=4.3e-29 Score=232.28 Aligned_cols=159 Identities=25% Similarity=0.482 Sum_probs=121.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCC-c---EEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeE-
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDG-M---EFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFR- 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~-~---~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~- 260 (360)
.++|+..+.||+|+||.||+|+.... . .||||. +.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 45788999999999999999997533 2 789984 45699999999999999999999887655
Q ss_pred -----EEEEEccCCCCHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEE
Q 040294 261 -----ALVLEYMTNGSLEKVLYSSN-----CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHL 330 (360)
Q Consensus 261 -----~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki 330 (360)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEE
Confidence 99999999999999986421 25889999999999999999999 889999999999999999999999
Q ss_pred eecccccccCCCCCceeeecccccCcccCC
Q 040294 331 SDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 331 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+|||+++...............+|+.|+||
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 208 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208 (323)
T ss_dssp CCCCC-----------------CCGGGCCH
T ss_pred eeccccccccccccccccccccCcccccCc
Confidence 999999876544332333345678899998
No 112
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.95 E-value=2.7e-28 Score=223.90 Aligned_cols=158 Identities=19% Similarity=0.273 Sum_probs=138.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh---------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS---------FDVECEVMKSI-HHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~---------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|+++++++ +|+|++++++++..+...++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 35688899999999999999995 5789999984 56799999999 7999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc-----EEEeecccccccCCC
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV-----AHLSDFGIAKLLTGE 342 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~-----~ki~DFGla~~~~~~ 342 (360)
+++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.....
T Consensus 89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99999999876667999999999999999999999 899999999999999987776 999999999887544
Q ss_pred CCc-----eeeecccccCcccCC
Q 040294 343 DQS-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~-----~~~~~~~gt~~Y~aP 360 (360)
... .......||+.|+||
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aP 187 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSI 187 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCH
T ss_pred cccccccccCccCCCCCcccCCc
Confidence 221 123456799999998
No 113
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=3.4e-29 Score=244.24 Aligned_cols=157 Identities=28% Similarity=0.508 Sum_probs=130.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
.++|+..+.||+|+||.||+|++.++..||||. |.+|++++++++||||+++++++.+ +..++||||++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 356778899999999999999998888899983 5689999999999999999999977 66899999999
Q ss_pred CCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 269 NGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 269 ~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
+|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~ 337 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTA 337 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-eec
Confidence 99999999753 245889999999999999999999 8999999999999999999999999999998765432 122
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
.....+|+.|+||
T Consensus 338 ~~~~~~~~~y~aP 350 (452)
T 1fmk_A 338 RQGAKFPIKWTAP 350 (452)
T ss_dssp -----CCGGGSCH
T ss_pred ccCCcccccccCH
Confidence 2345578899998
No 114
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.95 E-value=1.1e-28 Score=236.31 Aligned_cols=154 Identities=24% Similarity=0.398 Sum_probs=131.1
Q ss_pred CCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCC--CCCeeEEEEEecCCCeEEEEEE
Q 040294 201 GFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIH--HRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lv~e 265 (360)
.|+..+.||+|+||.||+|...+++.||||. +.+|++++++++ |||||++++++..++..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 4888899999999999999988899999984 357999999997 5999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
+.+++|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+++.+......
T Consensus 137 -~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 137 -CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp -CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred -cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 56889999998654 6788889999999999999999 89999999999999996 589999999999987544322
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......+||+.||||
T Consensus 211 ~~~~~~~gt~~y~aP 225 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPP 225 (390)
T ss_dssp ---CCSCCCGGGCCH
T ss_pred ccCCCCCcCCCccCh
Confidence 233456799999998
No 115
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.95 E-value=7.3e-29 Score=227.03 Aligned_cols=155 Identities=32% Similarity=0.493 Sum_probs=131.1
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
+.|...+.||+|+||.||+|+. .++..+|+|. +.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4578889999999999999986 4688999873 46799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee---cCCCcEEEeecccccccC
Q 040294 267 MTNGSLEKVLYSS---NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL---DDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 267 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DFGla~~~~ 340 (360)
+++|+|.+.+... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988542 356899999999999999999999 8899999999999999 456889999999998765
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
... ......||+.|+||
T Consensus 179 ~~~---~~~~~~~t~~y~aP 195 (285)
T 3is5_A 179 SDE---HSTNAAGTALYMAP 195 (285)
T ss_dssp -----------CTTGGGCCH
T ss_pred Ccc---cCcCcccccCcCCh
Confidence 432 23345799999998
No 116
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.95 E-value=6e-29 Score=227.96 Aligned_cols=156 Identities=28% Similarity=0.472 Sum_probs=122.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.+.|+..+.||+|+||.||+|+... .||||. +.+|++++++++||||+++++++.. +..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC-CccEEEEE
Confidence 3568888999999999999998753 588863 5679999999999999999997654 45799999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877777999999999999999999999 889999999999999999999999999999876543322
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
.......||+.|+||
T Consensus 177 ~~~~~~~gt~~y~aP 191 (289)
T 3og7_A 177 HQFEQLSGSILWMAP 191 (289)
T ss_dssp -------CCCTTCCH
T ss_pred ccccccCCCccccCc
Confidence 233456799999998
No 117
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.95 E-value=4.6e-29 Score=231.89 Aligned_cols=160 Identities=24% Similarity=0.442 Sum_probs=136.4
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc------CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCe
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDF 259 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~------~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~ 259 (360)
..++|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++.+++.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 3457888899999999999999854 367899984 4579999999999999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEE
Q 040294 260 RALVLEYMTNGSLEKVLYSSN---------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHL 330 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki 330 (360)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEE
Confidence 999999999999999987421 34688899999999999999999 889999999999999999999999
Q ss_pred eecccccccCCCCCceeeecccccCcccCC
Q 040294 331 SDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 331 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+|||+++...............||+.|+||
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred CcCccccccccccccccccCCCCCCCccCh
Confidence 999999876543322222344678899998
No 118
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.95 E-value=7.7e-29 Score=238.05 Aligned_cols=155 Identities=28% Similarity=0.431 Sum_probs=125.3
Q ss_pred CCCCCC-CeeccCCCccEEEEEcc-CCcEEEehhh------HHHHHHh-hcCCCCCeeEEEEEecC----CCeEEEEEEc
Q 040294 200 NGFSAN-NLIGRGSFGSVYKARLQ-DGMEFAIKSF------DVECEVM-KSIHHRNLVKIISSCSN----EDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~------~~E~~~l-~~l~hpniv~l~~~~~~----~~~~~lv~e~ 266 (360)
++|... ++||+|+||.||+|+.. +++.||||.+ .+|++++ +..+||||++++++|.. .+..++||||
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~ 140 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 140 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEe
Confidence 455554 68999999999999864 7889999854 5788876 45689999999998865 5678999999
Q ss_pred cCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC---CCcEEEeecccccccCCC
Q 040294 267 MTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---NIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 267 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DFGla~~~~~~ 342 (360)
|++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 141 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~ 217 (400)
T 1nxk_A 141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH 217 (400)
T ss_dssp CCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--
T ss_pred CCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCCC
Confidence 99999999998653 35899999999999999999999 889999999999999997 789999999999976532
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. .....+||+.|+||
T Consensus 218 ~---~~~~~~gt~~y~aP 232 (400)
T 1nxk_A 218 N---SLTTPCYTPYYVAP 232 (400)
T ss_dssp ------------CTTCCG
T ss_pred C---ccccCCCCCCccCH
Confidence 2 23456799999998
No 119
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=3.1e-28 Score=222.60 Aligned_cols=152 Identities=30% Similarity=0.517 Sum_probs=133.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh------------------hHHHHHHhhcCCCCCeeEEEEEecCCCe
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS------------------FDVECEVMKSIHHRNLVKIISSCSNEDF 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~------------------~~~E~~~l~~l~hpniv~l~~~~~~~~~ 259 (360)
.++|+..+.||+|+||.||+|+. .+++.||+|. +.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35688889999999999999996 4789999984 346999999999999999999998776
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCceeecCCCc-----EEEee
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTP--IIHCDLKPHNVLLDDNIV-----AHLSD 332 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~--iiHrdlk~~NiLl~~~~~-----~ki~D 332 (360)
++||||+++|+|.+.+......+++..+..++.|++.||+||| +.+ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999877778999999999999999999999 778 999999999999987776 99999
Q ss_pred cccccccCCCCCceeeecccccCcccCC
Q 040294 333 FGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 333 FGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+++.... ......||+.|+||
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aP 195 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAP 195 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCG
T ss_pred CCccccccc-----cccccCCCccccCc
Confidence 999985432 23346799999998
No 120
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.95 E-value=1.3e-28 Score=224.29 Aligned_cols=154 Identities=27% Similarity=0.471 Sum_probs=133.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+.. ++..||||. +.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467888999999999999999865 677899984 34689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999998754 35888999999999999999999 8999999999999999999999999999987644322
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
.....||+.|+||
T Consensus 164 ----~~~~~~~~~y~aP 176 (279)
T 3fdn_A 164 ----RTDLCGTLDYLPP 176 (279)
T ss_dssp --------CCCCTTCCH
T ss_pred ----ccccCCCCCccCH
Confidence 2345799999998
No 121
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=230.53 Aligned_cols=156 Identities=35% Similarity=0.508 Sum_probs=127.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehhh--------HH--HHHHhhcCCCCCeeEEEEEec-----CCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF--------DV--ECEVMKSIHHRNLVKIISSCS-----NEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~--------~~--E~~~l~~l~hpniv~l~~~~~-----~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+. +++.||||.+ .. |+..+..++||||+++++.+. .....++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 45788899999999999999987 6889999854 23 344455689999999997542 33467899
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC---------CeEEccCCCCceeecCCCcEEEeecc
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFST---------PIIHCDLKPHNVLLDDNIVAHLSDFG 334 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~---------~iiHrdlk~~NiLl~~~~~~ki~DFG 334 (360)
|||+++|+|.+++.... .++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|||
T Consensus 91 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp ECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 99999999999997643 488889999999999999999 77 99999999999999999999999999
Q ss_pred cccccCCCCC------ceeeecccccCcccCC
Q 040294 335 IAKLLTGEDQ------SMTQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~------~~~~~~~~gt~~Y~aP 360 (360)
+++.+..... ........||+.|+||
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCH
T ss_pred ceeecccccccCccccccccccCCCccceeCc
Confidence 9987654321 1122345799999998
No 122
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.95 E-value=2e-28 Score=222.67 Aligned_cols=154 Identities=25% Similarity=0.454 Sum_probs=118.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+. .+++.||+|. +.+|++++++++||||+++++++.+++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 35799999999999999999985 4789999984 45799999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+ +++|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 67888887654 35889999999999999999999 8899999999999999999999999999998765432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 167 ---~~~~~~~t~~y~aP 180 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAP 180 (275)
T ss_dssp -----------CTTCCH
T ss_pred ---cccCCCCCcCcCCc
Confidence 12345699999998
No 123
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.95 E-value=2.7e-28 Score=225.54 Aligned_cols=156 Identities=31% Similarity=0.488 Sum_probs=132.2
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh----------------HHHHHHhhcCC---CCCeeEEEEEecCC
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF----------------DVECEVMKSIH---HRNLVKIISSCSNE 257 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~----------------~~E~~~l~~l~---hpniv~l~~~~~~~ 257 (360)
..++|+..+.||+|+||.||+|+. .+++.||||.+ .+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999996 57899999853 46777777665 99999999999875
Q ss_pred C-----eEEEEEEccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEe
Q 040294 258 D-----FRALVLEYMTNGSLEKVLYSSNC-ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLS 331 (360)
Q Consensus 258 ~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 331 (360)
. ..++||||+. |+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 5899999997 599999976543 4899999999999999999999 8899999999999999999999999
Q ss_pred ecccccccCCCCCceeeecccccCcccCC
Q 040294 332 DFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 332 DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|||+++...... ......||+.|+||
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aP 188 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAP 188 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCH
T ss_pred eCccccccCCCc---ccCCccccccccCc
Confidence 999998765332 23456799999998
No 124
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.95 E-value=8.7e-29 Score=239.08 Aligned_cols=155 Identities=29% Similarity=0.403 Sum_probs=128.1
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------------hHHHHHHhhcCCCCCeeEEEEEecCC
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------------FDVECEVMKSIHHRNLVKIISSCSNE 257 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------------~~~E~~~l~~l~hpniv~l~~~~~~~ 257 (360)
..++|...+.||+|+||.||+|+. .+++.||||. +.+|++++++++|||||++++++..+
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 457899999999999999999985 4788999974 45799999999999999999998654
Q ss_pred CeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC---CcEEEeecc
Q 040294 258 DFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN---IVAHLSDFG 334 (360)
Q Consensus 258 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DFG 334 (360)
..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||
T Consensus 213 -~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 213 -DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp -EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred -ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 579999999999999988654 46889999999999999999999 8899999999999999754 459999999
Q ss_pred cccccCCCCCceeeecccccCcccCC
Q 040294 335 IAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+++...... .....+||+.|+||
T Consensus 288 ~a~~~~~~~---~~~~~~gt~~y~aP 310 (419)
T 3i6u_A 288 HSKILGETS---LMRTLCGTPTYLAP 310 (419)
T ss_dssp TTTSCC--------------CTTCCT
T ss_pred cceecCCCc---cccccCCCCCccCc
Confidence 999765332 23356799999999
No 125
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.95 E-value=1.5e-28 Score=223.54 Aligned_cols=154 Identities=31% Similarity=0.443 Sum_probs=136.0
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
+.|+..+.||+|+||.||+|+.. ++..||+|. +.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 45888899999999999999965 577889873 567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee---cCCCcEEEeecccccccCCCCC
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL---DDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DFGla~~~~~~~~ 344 (360)
++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~- 163 (277)
T 3f3z_A 89 TGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK- 163 (277)
T ss_dssp CSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS-
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc-
Confidence 999999988764 35889999999999999999999 8999999999999999 788999999999998765433
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 164 --~~~~~~~t~~y~aP 177 (277)
T 3f3z_A 164 --MMRTKVGTPYYVSP 177 (277)
T ss_dssp --CBCCCCSCTTTCCH
T ss_pred --chhccCCCCCccCh
Confidence 22345799999998
No 126
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.95 E-value=1.2e-28 Score=233.04 Aligned_cols=163 Identities=26% Similarity=0.370 Sum_probs=134.4
Q ss_pred CHHHHHHHhCCCCCCCeeccCCCccEEEEEccCCcEEEehh----------------------hHHHHHHhhcCCCCCee
Q 040294 191 SYLELLRATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------------------FDVECEVMKSIHHRNLV 248 (360)
Q Consensus 191 ~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------------------~~~E~~~l~~l~hpniv 248 (360)
...++....++|...+.||+|+||.||+|...+++.||||. +.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 44567778899999999999999999999988899999984 35799999999999999
Q ss_pred EEEEEec-----CCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec
Q 040294 249 KIISSCS-----NEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD 323 (360)
Q Consensus 249 ~l~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~ 323 (360)
++++++. .....++||||++ |+|.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence 9999983 3447899999998 6999988877667999999999999999999999 88999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 324 DNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 324 ~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.++.+||+|||+++...... ......||+.|+||
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aP 202 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA---NKTHYVTHRWYRAP 202 (362)
T ss_dssp TTCCEEECCTTC------------------CGGGCCH
T ss_pred CCCCEEEEecCccccccccc---ccceecccceecCc
Confidence 99999999999998654332 23345789999998
No 127
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.95 E-value=1.3e-28 Score=239.92 Aligned_cols=153 Identities=33% Similarity=0.493 Sum_probs=131.9
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEecCCC-eEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSCSNED-FRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lv~e~~~ 268 (360)
.++|+..+.||+|+||.||+|++. ++.||||. |.+|++++++++|||||++++++...+ ..++||||++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 356778899999999999999985 67999983 568999999999999999999987665 7899999999
Q ss_pred CCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 269 NGSLEKVLYSSNC-ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 269 ~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
+|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 342 (450)
T 1k9a_A 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 342 (450)
T ss_dssp TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----
Confidence 9999999986543 3688999999999999999999 899999999999999999999999999999864322
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
.....+|+.|+||
T Consensus 343 ~~~~~~~~~y~aP 355 (450)
T 1k9a_A 343 QDTGKLPVKWTAP 355 (450)
T ss_dssp ----CCCTTTSCH
T ss_pred ccCCCCCcceeCH
Confidence 1223578899998
No 128
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=6.6e-29 Score=238.14 Aligned_cols=155 Identities=29% Similarity=0.491 Sum_probs=134.7
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh------------HHHHHHhhcCCCCCeeEEEEEecCCC--eEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF------------DVECEVMKSIHHRNLVKIISSCSNED--FRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~------------~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 264 (360)
+.|...+.||+|+||.||+|+.. +++.||||.+ .+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 45788899999999999999965 6899999843 47999999999999999999998755 789999
Q ss_pred EccCCCCHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee----cCCCcEEEeecccccc
Q 040294 265 EYMTNGSLEKVLYSSN--CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL----DDNIVAHLSDFGIAKL 338 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DFGla~~ 338 (360)
||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997543 23899999999999999999999 8899999999999999 7788899999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
..... ......||+.|+||
T Consensus 166 ~~~~~---~~~~~~gt~~y~aP 184 (396)
T 4eut_A 166 LEDDE---QFVSLYGTEEYLHP 184 (396)
T ss_dssp CCCGG---GSSCSSSCCTTCCH
T ss_pred ccCCC---ccccccCCccccCH
Confidence 65432 22346799999998
No 129
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.95 E-value=2.9e-29 Score=229.51 Aligned_cols=152 Identities=26% Similarity=0.413 Sum_probs=133.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CC-------cEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DG-------MEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~-------~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 260 (360)
++|...+.||+|+||.||+|+.. ++ ..||+|. +.+|++++++++||||+++++++.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 46778899999999999999865 33 4688873 45799999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc--------EEEee
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV--------AHLSD 332 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~--------~ki~D 332 (360)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999876666899999999999999999999 899999999999999998876 99999
Q ss_pred cccccccCCCCCceeeecccccCcccCC
Q 040294 333 FGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 333 FGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+++..... ....||+.|+||
T Consensus 165 fg~~~~~~~~------~~~~~~~~y~aP 186 (289)
T 4fvq_A 165 PGISITVLPK------DILQERIPWVPP 186 (289)
T ss_dssp CCSCTTTSCH------HHHHHTTTTSCH
T ss_pred CcccccccCc------cccCCcCcccCH
Confidence 9998765321 234688999998
No 130
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=1.4e-28 Score=235.05 Aligned_cols=157 Identities=25% Similarity=0.473 Sum_probs=124.9
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------------HHHHHHhhcCC-CCCeeEEEEEecCCC--eE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------------DVECEVMKSIH-HRNLVKIISSCSNED--FR 260 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------------~~E~~~l~~l~-hpniv~l~~~~~~~~--~~ 260 (360)
..++|+..+.||+|+||.||+|+. .+++.||||.+ .+|+.+++++. |||||++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 356799999999999999999985 57899999843 36889999997 999999999997544 78
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
|+|||||+ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 5999998763 5888899999999999999999 8999999999999999999999999999998754
Q ss_pred CCCC-------------------ceeeecccccCcccCC
Q 040294 341 GEDQ-------------------SMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~-------------------~~~~~~~~gt~~Y~aP 360 (360)
.... ....+..+||++|+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 199 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCH
Confidence 3110 1122346899999998
No 131
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.95 E-value=8.9e-29 Score=226.19 Aligned_cols=158 Identities=30% Similarity=0.537 Sum_probs=138.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+|+.. ++..||+|. +.+|++++++++||||+++++++.+++..++||||+
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 456888899999999999999975 588899974 567999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 268 TNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 268 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 167 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YT 167 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-SE
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-cc
Confidence 9999999997643 45899999999999999999999 8899999999999999999999999999999876443 22
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......+|+.|+||
T Consensus 168 ~~~~~~~~~~y~aP 181 (288)
T 3kfa_A 168 AHAGAKFPIKWTAP 181 (288)
T ss_dssp EETTEEECGGGCCH
T ss_pred cccCCccccCcCCh
Confidence 33445678899998
No 132
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=2e-28 Score=233.61 Aligned_cols=157 Identities=29% Similarity=0.479 Sum_probs=132.1
Q ss_pred HHhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------HHHHHHhhcCCCCCeeEEEEEecC------------
Q 040294 197 RATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------DVECEVMKSIHHRNLVKIISSCSN------------ 256 (360)
Q Consensus 197 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------~~E~~~l~~l~hpniv~l~~~~~~------------ 256 (360)
...++|+..+.||+|+||.||+|+. .+|+.||||.+ .+|+++++.++|||||+++++|..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 3467899999999999999999985 58999999954 579999999999999999999843
Q ss_pred --------------------------CCeEEEEEEccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCC
Q 040294 257 --------------------------EDFRALVLEYMTNGSLEKVLYS---SNCILDILQRLNIMINVTSALEYLHFGFS 307 (360)
Q Consensus 257 --------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~yLH~~~~ 307 (360)
....++||||++ |+|.+.+.. ....+++..+..++.|+++||+||| +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~ 159 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---S 159 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence 345889999998 588777653 3456899999999999999999999 9
Q ss_pred CCeEEccCCCCceeec-CCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 308 TPIIHCDLKPHNVLLD-DNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 308 ~~iiHrdlk~~NiLl~-~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.+|+||||||+||+++ .++.+||+|||+|+.+.... ......||+.|+||
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aP 210 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAP 210 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCH
Confidence 9999999999999998 68999999999999765433 22345789999998
No 133
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.95 E-value=1.7e-28 Score=226.90 Aligned_cols=155 Identities=30% Similarity=0.429 Sum_probs=131.1
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
++|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56888899999999999999965 689999984 3469999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 99999999887654 45889999999999999999999 88999999999999999999999999999987653321
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 158 -~~~~~~~~~~y~aP 171 (311)
T 4agu_A 158 -YYDDEVATRWYRSP 171 (311)
T ss_dssp ---------GGGCCH
T ss_pred -ccCCCcCCccccCh
Confidence 22345789999998
No 134
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.7e-28 Score=227.85 Aligned_cols=157 Identities=28% Similarity=0.457 Sum_probs=130.9
Q ss_pred HhCCCCCCCeeccCCCccEEEEEccCCcEEEehhh--------HHHHHHhhc--CCCCCeeEEEEEecCC----CeEEEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF--------DVECEVMKS--IHHRNLVKIISSCSNE----DFRALV 263 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~--------~~E~~~l~~--l~hpniv~l~~~~~~~----~~~~lv 263 (360)
..++|+..+.||+|+||.||+|+.. ++.||||.+ ..|.+++.. ++||||+++++++... ...++|
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 3457999999999999999999975 889999854 345555544 4899999999999877 789999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC--------CeEEccCCCCceeecCCCcEEEeeccc
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFST--------PIIHCDLKPHNVLLDDNIVAHLSDFGI 335 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~--------~iiHrdlk~~NiLl~~~~~~ki~DFGl 335 (360)
|||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 114 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 114 TDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp ECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 9999999999999764 5889999999999999999999 66 999999999999999999999999999
Q ss_pred ccccCCCCCc--eeeecccccCcccCC
Q 040294 336 AKLLTGEDQS--MTQTQTLATIGYMAP 360 (360)
Q Consensus 336 a~~~~~~~~~--~~~~~~~gt~~Y~aP 360 (360)
++.+...... .......||+.|+||
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aP 215 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPP 215 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCH
T ss_pred ceeeccccccccCCCCCCccCcceeCh
Confidence 9876543221 112245799999998
No 135
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.95 E-value=6.6e-29 Score=229.92 Aligned_cols=167 Identities=25% Similarity=0.414 Sum_probs=139.8
Q ss_pred CHHHHHHHhCCCCCCCeeccCCCccEEEEEc------cCCcEEEehh------------hHHHHHHhhcC-CCCCeeEEE
Q 040294 191 SYLELLRATNGFSANNLIGRGSFGSVYKARL------QDGMEFAIKS------------FDVECEVMKSI-HHRNLVKII 251 (360)
Q Consensus 191 ~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~------------~~~E~~~l~~l-~hpniv~l~ 251 (360)
...+.....++|+..+.||+|+||.||+|+. .+++.||||. +.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3334444567899999999999999999974 3567899984 45689999999 799999999
Q ss_pred EEecCCC-eEEEEEEccCCCCHHHHHhcCCCC---------------CCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccC
Q 040294 252 SSCSNED-FRALVLEYMTNGSLEKVLYSSNCI---------------LDILQRLNIMINVTSALEYLHFGFSTPIIHCDL 315 (360)
Q Consensus 252 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdl 315 (360)
+++...+ ..++||||+++|+|.+++...... +++..+..++.|++.||+||| +.+|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccC
Confidence 9988755 589999999999999999765432 788899999999999999999 889999999
Q ss_pred CCCceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 316 KPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 316 k~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+||+++.++.+||+|||+++...............||+.|+||
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 219 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCc
Confidence 999999999999999999999877554433334456789999998
No 136
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.95 E-value=1.5e-28 Score=223.87 Aligned_cols=155 Identities=30% Similarity=0.549 Sum_probs=135.7
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------hHHHHHHhhcCCCCCeeEEEEEecC---------------
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------FDVECEVMKSIHHRNLVKIISSCSN--------------- 256 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------~~~E~~~l~~l~hpniv~l~~~~~~--------------- 256 (360)
.+|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 90 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence 46888899999999999999975 789999984 5789999999999999999998854
Q ss_pred -CCeEEEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecc
Q 040294 257 -EDFRALVLEYMTNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFG 334 (360)
Q Consensus 257 -~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFG 334 (360)
....++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcch
Confidence 34589999999999999999754 346889999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCCCceeeecccccCcccCC
Q 040294 335 IAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+++...... ......||+.|+||
T Consensus 168 ~~~~~~~~~---~~~~~~~~~~y~aP 190 (284)
T 2a19_B 168 LVTSLKNDG---KRTRSKGTLRYMSP 190 (284)
T ss_dssp TCEESSCCS---CCCCCCSCCTTSCH
T ss_pred hheeccccc---cccccCCcccccCh
Confidence 998875432 12345699999998
No 137
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=3.8e-30 Score=241.05 Aligned_cols=149 Identities=21% Similarity=0.240 Sum_probs=124.3
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------------hHHHHHHhhcCC---------CCCeeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------------FDVECEVMKSIH---------HRNLVKII 251 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------------~~~E~~~l~~l~---------hpniv~l~ 251 (360)
++|+..+.||+|+||.||+|+. +|+.||||. +.+|+++++.++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4577889999999999999998 689999974 346888888775 77777777
Q ss_pred EEe-----------------c-------------CCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q 040294 252 SSC-----------------S-------------NEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEY 301 (360)
Q Consensus 252 ~~~-----------------~-------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~y 301 (360)
+.+ . .++..++||||+++|++.+.+.. ..+++..+..++.|++.||+|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence 653 2 26789999999999977666643 457899999999999999999
Q ss_pred hhhcCCCCeEEccCCCCceeecCCC--------------------cEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 302 LHFGFSTPIIHCDLKPHNVLLDDNI--------------------VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 302 LH~~~~~~iiHrdlk~~NiLl~~~~--------------------~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+ +.+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.||||
T Consensus 177 lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 177 AEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 993 36799999999999999876 8999999999976432 34799999999
No 138
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.95 E-value=6.6e-29 Score=232.05 Aligned_cols=158 Identities=27% Similarity=0.443 Sum_probs=127.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcE----EEeh------------hhHHHHHHhhcCCCCCeeEEEEEecCCCeEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGME----FAIK------------SFDVECEVMKSIHHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~----vavK------------~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 261 (360)
.++|+..+.||+|+||.||+|++. +++. ||+| .+.+|++++++++||||++++++|..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357888999999999999999854 4544 4665 3567999999999999999999998765 78
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+|+||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887777999999999999999999999 88999999999999999999999999999998754
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
...........||+.|+||
T Consensus 170 ~~~~~~~~~~~~t~~y~aP 188 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp ----------CCCGGGSCH
T ss_pred ccccccccCCCccccccCH
Confidence 4333333445678899998
No 139
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=1.1e-28 Score=231.54 Aligned_cols=162 Identities=31% Similarity=0.423 Sum_probs=132.1
Q ss_pred HHHhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh----------------hHHHHHHhhcCCCCCeeEEEEEecCCC
Q 040294 196 LRATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS----------------FDVECEVMKSIHHRNLVKIISSCSNED 258 (360)
Q Consensus 196 ~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~----------------~~~E~~~l~~l~hpniv~l~~~~~~~~ 258 (360)
....++|+..+.||+|+||.||+|+. .++..||+|. +..|++++++++||||++++++|.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34456789999999999999999986 4788899984 346999999999999999999999999
Q ss_pred eEEEEEEccCCCCHHHHHhcC---------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 040294 259 FRALVLEYMTNGSLEKVLYSS---------------------------------------NCILDILQRLNIMINVTSAL 299 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~l 299 (360)
..++||||+++|+|.+++... ...+++.....++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998520 11134566788999999999
Q ss_pred HHhhhcCCCCeEEccCCCCceeecCCC--cEEEeecccccccCCCCC--ceeeecccccCcccCC
Q 040294 300 EYLHFGFSTPIIHCDLKPHNVLLDDNI--VAHLSDFGIAKLLTGEDQ--SMTQTQTLATIGYMAP 360 (360)
Q Consensus 300 ~yLH~~~~~~iiHrdlk~~NiLl~~~~--~~ki~DFGla~~~~~~~~--~~~~~~~~gt~~Y~aP 360 (360)
+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+||
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence 9999 88999999999999998766 899999999987643221 1123456799999998
No 140
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.95 E-value=2.7e-28 Score=229.77 Aligned_cols=158 Identities=27% Similarity=0.471 Sum_probs=135.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecC--------
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSN-------- 256 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~-------- 256 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35688899999999999999996 5789999983 3579999999999999999999876
Q ss_pred CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccc
Q 040294 257 EDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIA 336 (360)
Q Consensus 257 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla 336 (360)
.+..++||||+++ +|.+.+......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4468999999985 888888776667999999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCCC--ceeeecccccCcccCC
Q 040294 337 KLLTGEDQ--SMTQTQTLATIGYMAP 360 (360)
Q Consensus 337 ~~~~~~~~--~~~~~~~~gt~~Y~aP 360 (360)
+.+..... ........||+.|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPP 197 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCH
T ss_pred ccccccccccccccCCcccccCccCc
Confidence 87653221 1223456789999998
No 141
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.95 E-value=1.9e-28 Score=228.55 Aligned_cols=158 Identities=28% Similarity=0.449 Sum_probs=136.7
Q ss_pred CCCCCCCeeccCCCccEEEEEc-----cCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEec--CCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-----QDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCS--NEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~--~~~~~~ 261 (360)
++|+..+.||+|+||.||+|++ .+++.||||. +.+|++++++++||||+++++++. +.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4678889999999999999983 4678899984 567999999999999999999886 456789
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999875556899999999999999999999 89999999999999999999999999999998754
Q ss_pred CCCce-eeecccccCcccCC
Q 040294 342 EDQSM-TQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~-~~~~~~gt~~Y~aP 360 (360)
..... ......||+.|+||
T Consensus 180 ~~~~~~~~~~~~~~~~y~aP 199 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAP 199 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCH
T ss_pred CCccceeeccCCccccccCH
Confidence 43221 22345688899998
No 142
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.95 E-value=7.1e-29 Score=231.82 Aligned_cols=159 Identities=26% Similarity=0.469 Sum_probs=136.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CC-----cEEEehh------------hHHHHHHhhcC-CCCCeeEEEEEecCCCe
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DG-----MEFAIKS------------FDVECEVMKSI-HHRNLVKIISSCSNEDF 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~-----~~vavK~------------~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 259 (360)
.++|+..+.||+|+||.||+|+.. ++ ..||+|. +.+|+++++++ +||||++++++|..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 467888999999999999999854 23 4789873 45799999999 89999999999999999
Q ss_pred EEEEEEccCCCCHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC
Q 040294 260 RALVLEYMTNGSLEKVLYSS-------------NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI 326 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~ 326 (360)
.++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCC
Confidence 99999999999999998643 234788999999999999999999 88999999999999999999
Q ss_pred cEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 327 VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 327 ~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.+||+|||+++...............||+.|+||
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 235 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 235 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCH
Confidence 9999999999876544333333445678899998
No 143
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.95 E-value=1.5e-28 Score=225.98 Aligned_cols=158 Identities=28% Similarity=0.494 Sum_probs=131.5
Q ss_pred CCCCCCCeeccCCCccEEEEEccC----CcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEec-CCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQD----GMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCS-NEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~l 262 (360)
..|+..+.||+|+||.||+|+..+ ...+|+|. +.+|++++++++||||++++++|. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 357778999999999999998642 23578763 457999999999999999999864 5567899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999877677899999999999999999999 899999999999999999999999999999876543
Q ss_pred CC--ceeeecccccCcccCC
Q 040294 343 DQ--SMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~--~~~~~~~~gt~~Y~aP 360 (360)
.. ........||+.|+||
T Consensus 182 ~~~~~~~~~~~~~~~~y~aP 201 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMAL 201 (298)
T ss_dssp GGCBC-----CCBCGGGSCH
T ss_pred chhccccccCCCCCccccCh
Confidence 21 1123345688899998
No 144
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.95 E-value=1e-28 Score=233.39 Aligned_cols=162 Identities=30% Similarity=0.444 Sum_probs=138.9
Q ss_pred cCHHHHHHHhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh----------HHHHHHhhcCC-----CCCeeEEEEE
Q 040294 190 FSYLELLRATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF----------DVECEVMKSIH-----HRNLVKIISS 253 (360)
Q Consensus 190 ~~~~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~----------~~E~~~l~~l~-----hpniv~l~~~ 253 (360)
+++.+.....++|...+.||+|+||.||+|+. .+++.||||.+ ..|++++++++ |||||+++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence 34344444567899999999999999999996 47889999854 45888898886 9999999999
Q ss_pred ecCCCeEEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC--------
Q 040294 254 CSNEDFRALVLEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD-------- 324 (360)
Q Consensus 254 ~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~-------- 324 (360)
+...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 105 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred eeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccccc
Confidence 99999999999999 999999997654 35889999999999999999999 899999999999999975
Q ss_pred -----------------CCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 325 -----------------NIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 325 -----------------~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
++.+||+|||+++...... ....||+.|+||
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aP 228 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAP 228 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCH
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCc
Confidence 7899999999998754322 345799999998
No 145
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.95 E-value=3.4e-28 Score=221.90 Aligned_cols=155 Identities=26% Similarity=0.505 Sum_probs=135.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|... +++.||+|. +.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999864 688999984 356999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc---EEEeecccccccCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV---AHLSDFGIAKLLTG 341 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DFGla~~~~~ 341 (360)
||+++++|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999888754 35889999999999999999999 889999999999999986654 99999999987654
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. ......||+.|+||
T Consensus 161 ~~---~~~~~~~~~~y~aP 176 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSP 176 (284)
T ss_dssp SC---BCCCSCSCGGGCCH
T ss_pred Cc---cccCCCCCcCCcCc
Confidence 32 22346799999998
No 146
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.95 E-value=2e-28 Score=223.13 Aligned_cols=153 Identities=25% Similarity=0.453 Sum_probs=133.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSI-HHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+.. +++.||||. +.+|+..+.++ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888999999999999999975 789999984 34578888888 999999999999999999999
Q ss_pred EEccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC----------------
Q 040294 264 LEYMTNGSLEKVLYSS---NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---------------- 324 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---------------- 324 (360)
|||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 9999999999999753 245889999999999999999999 889999999999999984
Q ss_pred ---CCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 325 ---NIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 325 ---~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
...+||+|||.+....... ...||+.|+||
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aP 199 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLAN 199 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCH
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccCh
Confidence 4479999999998765332 23589999998
No 147
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.95 E-value=1.8e-28 Score=222.63 Aligned_cols=158 Identities=25% Similarity=0.398 Sum_probs=137.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|+..+.||+|+||.||+|+.. +++.||||. +.+|+++++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 456888899999999999999965 789999974 3579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
|+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.........
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999998643 45889999999999999999999 889999999999999999999999999999876433222
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
.......||+.|+||
T Consensus 162 ~~~~~~~~~~~y~aP 176 (276)
T 2yex_A 162 RLLNKMCGTLPYVAP 176 (276)
T ss_dssp CCBCCCCSCGGGCCG
T ss_pred hcccCCccccCccCh
Confidence 223346799999998
No 148
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.95 E-value=2.3e-28 Score=227.47 Aligned_cols=154 Identities=27% Similarity=0.445 Sum_probs=136.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------------FDVECEVMKSIHHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 261 (360)
+.|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++.+++..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45888899999999999999965 688999973 467999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC----cEEEeeccccc
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI----VAHLSDFGIAK 337 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~DFGla~ 337 (360)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 999999999999999754 45888999999999999999999 88999999999999999887 79999999998
Q ss_pred ccCCCCCceeeecccccCcccCC
Q 040294 338 LLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 338 ~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
...... ......||+.|+||
T Consensus 168 ~~~~~~---~~~~~~gt~~y~aP 187 (321)
T 2a2a_A 168 EIEDGV---EFKNIFGTPEFVAP 187 (321)
T ss_dssp ECCTTC---CCCCCCSCGGGCCH
T ss_pred ecCccc---cccccCCCCCccCc
Confidence 765432 22345799999998
No 149
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.95 E-value=1.7e-28 Score=223.40 Aligned_cols=156 Identities=27% Similarity=0.506 Sum_probs=134.7
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTN 269 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 269 (360)
++|+..+.||+|+||.||+|+..++..||||. +.+|++++++++||||+++++++..+ ..++||||+++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~~~~ 91 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQE-PIYIITEYMEN 91 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCEEEEECCTT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCC-CcEEEEecCCC
Confidence 46778899999999999999988888999984 46799999999999999999998754 58999999999
Q ss_pred CCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCceee
Q 040294 270 GSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 348 (360)
Q Consensus 270 g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~ 348 (360)
++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 167 (279)
T 1qpc_A 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAR 167 (279)
T ss_dssp CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EECC
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cccc
Confidence 99999996532 25888999999999999999999 8999999999999999999999999999998765432 1222
Q ss_pred ecccccCcccCC
Q 040294 349 TQTLATIGYMAP 360 (360)
Q Consensus 349 ~~~~gt~~Y~aP 360 (360)
....+|+.|+||
T Consensus 168 ~~~~~~~~y~aP 179 (279)
T 1qpc_A 168 EGAKFPIKWTAP 179 (279)
T ss_dssp TTCCCCTTTSCH
T ss_pred cCCCCccCccCh
Confidence 344578899998
No 150
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.95 E-value=3.8e-29 Score=230.04 Aligned_cols=158 Identities=27% Similarity=0.459 Sum_probs=122.7
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehhh--------HHHHHHhhc--CCCCCeeEEEEEecCCC----eEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF--------DVECEVMKS--IHHRNLVKIISSCSNED----FRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~--------~~E~~~l~~--l~hpniv~l~~~~~~~~----~~~lv~e 265 (360)
++|...+.||+|+||.||+|+.. ++.||||.+ ..|.+++.. ++||||+++++++...+ ..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 56889999999999999999875 889999854 457777776 79999999999998776 7899999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFG-----FSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~-----~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
|+++|+|.+++... .+++..+..++.|++.||+|||.. ++.+|+||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~ 159 (303)
T 3gxj_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEE
T ss_pred ccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceecc
Confidence 99999999999654 467778889999999999999932 26789999999999999999999999999998765
Q ss_pred CCCCce--eeecccccCcccCC
Q 040294 341 GEDQSM--TQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~--~~~~~~gt~~Y~aP 360 (360)
...... ......||+.|+||
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aP 181 (303)
T 3gxj_A 160 SATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp TTTTEESCC-----CCGGGCCH
T ss_pred CCCcccccccCCCCcCccccCH
Confidence 443221 12344799999998
No 151
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.95 E-value=3.5e-28 Score=239.70 Aligned_cols=154 Identities=28% Similarity=0.459 Sum_probs=132.1
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
+.|+..+.||+|+||.||+|+.. ++..||+|. +.+|+++++.++|||||+++++|.+.+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 35888899999999999999965 788999984 3579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC---CCcEEEeecccccccCCC
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---NIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DFGla~~~~~~ 342 (360)
||++|+|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+++.....
T Consensus 117 ~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999999988654 35888999999999999999999 889999999999999975 456999999999876543
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. .....+||+.|+||
T Consensus 193 ~---~~~~~~gt~~y~aP 207 (494)
T 3lij_A 193 K---KMKERLGTAYYIAP 207 (494)
T ss_dssp B---CBCCCCSCTTTCCH
T ss_pred c---cccccCCCcCeeCH
Confidence 2 23346799999998
No 152
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.95 E-value=1.9e-28 Score=225.03 Aligned_cols=159 Identities=30% Similarity=0.458 Sum_probs=131.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecC-----------
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSN----------- 256 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~----------- 256 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|++++++++||||++++++|.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45688889999999999999996 4789999984 4579999999999999999998754
Q ss_pred --CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecc
Q 040294 257 --EDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFG 334 (360)
Q Consensus 257 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFG 334 (360)
.+..++||||+++|+|.+++......+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 35789999999999999999876667888889999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCCC------------ceeeecccccCcccCC
Q 040294 335 IAKLLTGEDQ------------SMTQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~------------~~~~~~~~gt~~Y~aP 360 (360)
+++....... ........||+.|+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 199 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199 (303)
T ss_dssp CCSCTTC-------------------------CTTSCH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCc
Confidence 9987643210 1122345699999998
No 153
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.4e-28 Score=228.82 Aligned_cols=158 Identities=29% Similarity=0.550 Sum_probs=128.2
Q ss_pred CCCCCCCeeccCCCccEEEEEccC-----CcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQD-----GMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~-----~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
+.|...+.||+|+||.||+|+... +..||||. +.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 346667899999999999998642 23589874 4579999999999999999999999999999
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999877667999999999999999999999 889999999999999999999999999999876543
Q ss_pred CC-ceeeecccccCcccCC
Q 040294 343 DQ-SMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~-~~~~~~~~gt~~Y~aP 360 (360)
.. ........+|+.|+||
T Consensus 201 ~~~~~~~~~~~~~~~y~aP 219 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAP 219 (333)
T ss_dssp ----------CCCGGGSCH
T ss_pred cccccccCCCCccccccCc
Confidence 21 1122234568899998
No 154
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.95 E-value=3.4e-28 Score=219.91 Aligned_cols=150 Identities=21% Similarity=0.439 Sum_probs=132.3
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCC--CeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNE--DFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv~ 264 (360)
++|+..+.||+|+||.||+|+.. ++.||||. +.+|++++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46888899999999999999985 78899974 45789999999999999999999887 7889999
Q ss_pred EccCCCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 265 EYMTNGSLEKVLYSSNC-ILDILQRLNIMINVTSALEYLHFGFSTP--IIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~yLH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
||+++|+|.+++..... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999986543 5899999999999999999999 777 99999999999999999999999998765322
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
....||+.|+||
T Consensus 166 -------~~~~~t~~y~aP 177 (271)
T 3kmu_A 166 -------PGRMYAPAWVAP 177 (271)
T ss_dssp -------TTCBSCGGGSCH
T ss_pred -------cCccCCccccCh
Confidence 234689999998
No 155
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=1.1e-28 Score=234.88 Aligned_cols=156 Identities=29% Similarity=0.527 Sum_probs=121.8
Q ss_pred CCCCCeeccCCCccEEEEEcc--CC--cEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecC-CCeEEEEE
Q 040294 202 FSANNLIGRGSFGSVYKARLQ--DG--MEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSN-EDFRALVL 264 (360)
Q Consensus 202 f~~~~~iG~G~~g~Vy~~~~~--~~--~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~ 264 (360)
|...+.||+|+||.||+|++. ++ ..||||. |.+|+.++++++||||++++++|.. ++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 556689999999999999864 22 3578873 4579999999999999999998754 45789999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999877777889999999999999999999 88999999999999999999999999999987643321
Q ss_pred c--eeeecccccCcccCC
Q 040294 345 S--MTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~--~~~~~~~gt~~Y~aP 360 (360)
. .......+|+.|+||
T Consensus 248 ~~~~~~~~~~~~~~y~aP 265 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMAL 265 (373)
T ss_dssp ----------CCGGGSCH
T ss_pred ccccccCCCCCcccccCh
Confidence 1 122345678899998
No 156
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.95 E-value=4.1e-28 Score=239.75 Aligned_cols=155 Identities=28% Similarity=0.477 Sum_probs=134.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------------------hHHHHHHhhcCCCCCeeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------------------FDVECEVMKSIHHRNLVKIISS 253 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------------------~~~E~~~l~~l~hpniv~l~~~ 253 (360)
.+.|...+.||+|+||.||+|+.. +++.||||. +.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999965 678999974 2368999999999999999999
Q ss_pred ecCCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC---cEEE
Q 040294 254 CSNEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI---VAHL 330 (360)
Q Consensus 254 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~---~~ki 330 (360)
|.+++..++|||||++|+|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEE
Confidence 99999999999999999999988754 35889999999999999999999 88999999999999998765 6999
Q ss_pred eecccccccCCCCCceeeecccccCcccCC
Q 040294 331 SDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 331 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+|||+++...... .....+||+.|+||
T Consensus 191 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aP 217 (504)
T 3q5i_A 191 VDFGLSSFFSKDY---KLRDRLGTAYYIAP 217 (504)
T ss_dssp CCCTTCEECCTTS---CBCCCCSCTTTCCH
T ss_pred EECCCCEEcCCCC---ccccccCCcCCCCH
Confidence 9999998775432 23346799999998
No 157
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.95 E-value=3.5e-28 Score=239.19 Aligned_cols=154 Identities=27% Similarity=0.461 Sum_probs=134.7
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
+.|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++|||||++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 46888999999999999999965 789999985 3469999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec---CCCcEEEeecccccccCCC
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD---DNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DFGla~~~~~~ 342 (360)
|+++|+|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+|||++ .++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 102 LYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 99999999988654 35889999999999999999999 89999999999999995 4568999999999876543
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. .....+||+.|+||
T Consensus 178 ~---~~~~~~gt~~y~aP 192 (486)
T 3mwu_A 178 T---KMKDRIGTAYYIAP 192 (486)
T ss_dssp -------CCTTGGGGCCG
T ss_pred C---ccCCCcCCCCCCCH
Confidence 2 23346799999998
No 158
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.95 E-value=3.6e-28 Score=230.52 Aligned_cols=157 Identities=32% Similarity=0.527 Sum_probs=138.7
Q ss_pred HHhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------------hHHHHHHhhcC-CCCCeeEEEEEec
Q 040294 197 RATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------------FDVECEVMKSI-HHRNLVKIISSCS 255 (360)
Q Consensus 197 ~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------------~~~E~~~l~~l-~hpniv~l~~~~~ 255 (360)
...++|+..+.||+|+||.||+|+.. +|+.||||. +..|+++++++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567888999999999999999975 799999983 34688899998 7999999999999
Q ss_pred CCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccc
Q 040294 256 NEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGI 335 (360)
Q Consensus 256 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGl 335 (360)
..+..++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence 999999999999999999999754 35889999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCCceeeecccccCcccCC
Q 040294 336 AKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 336 a~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+..+.... ......||+.|+||
T Consensus 247 ~~~~~~~~---~~~~~~gt~~y~aP 268 (365)
T 2y7j_A 247 SCHLEPGE---KLRELCGTPGYLAP 268 (365)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCH
T ss_pred ccccCCCc---ccccCCCCCCccCh
Confidence 98876433 22346799999998
No 159
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.95 E-value=5.1e-28 Score=222.05 Aligned_cols=155 Identities=23% Similarity=0.385 Sum_probs=136.0
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
++|...+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 46778899999999999999965 678899873 356899999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 95 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 95 ELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp ECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999988654 35889999999999999999999 88999999999999999999999999999987653321
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 171 --~~~~~~~~~~y~aP 184 (294)
T 2rku_A 171 --RKKVLCGTPNYIAP 184 (294)
T ss_dssp --CBCCCCSCCSSCCH
T ss_pred --ccccccCCCCcCCc
Confidence 22345799999998
No 160
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.95 E-value=1.8e-28 Score=241.08 Aligned_cols=154 Identities=28% Similarity=0.490 Sum_probs=136.9
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
+.|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++|||||+++++|.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45888899999999999999965 789999984 457999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee---cCCCcEEEeecccccccCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL---DDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DFGla~~~~~ 341 (360)
||+.+|+|.+.+... ..+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++....
T Consensus 106 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999999998764 35889999999999999999999 8899999999999999 4678999999999988754
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. .....+||+.|+||
T Consensus 182 ~~---~~~~~~gt~~y~aP 197 (484)
T 3nyv_A 182 SK---KMKDKIGTAYYIAP 197 (484)
T ss_dssp CC---SHHHHTTGGGTCCH
T ss_pred cc---ccccCCCCccccCc
Confidence 33 22346799999998
No 161
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.95 E-value=4.9e-28 Score=226.74 Aligned_cols=156 Identities=23% Similarity=0.382 Sum_probs=136.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|...+.||+|+||.||+++.. +++.||+|. +.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 346788899999999999999965 678899874 35689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999988654 35889999999999999999999 8899999999999999999999999999998765332
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
. ......||+.|+||
T Consensus 196 ~--~~~~~~gt~~y~aP 210 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAP 210 (335)
T ss_dssp C--CBCCCCSCCSSCCH
T ss_pred c--cccccCCCccccCH
Confidence 1 22345799999998
No 162
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.95 E-value=3.1e-28 Score=220.63 Aligned_cols=151 Identities=29% Similarity=0.521 Sum_probs=123.6
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh---------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS---------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~---------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
++|+..+.||+|+||.||+|++. ++.||||. +.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 56888899999999999999975 78899974 346899999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC---eEEccCCCCceeecC--------CCcEEEeec
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTP---IIHCDLKPHNVLLDD--------NIVAHLSDF 333 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~---iiHrdlk~~NiLl~~--------~~~~ki~DF 333 (360)
||+++++|.+++.. ..+++..+..++.|++.||+||| +.+ |+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999999864 35889999999999999999999 666 999999999999986 678999999
Q ss_pred ccccccCCCCCceeeecccccCcccCC
Q 040294 334 GIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 334 Gla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|+++...... .....||+.|+||
T Consensus 161 g~~~~~~~~~----~~~~~~~~~y~aP 183 (271)
T 3dtc_A 161 GLAREWHRTT----KMSAAGAYAWMAP 183 (271)
T ss_dssp CC-----------------CCGGGSCH
T ss_pred Cccccccccc----ccCCCCccceeCH
Confidence 9998765332 2245799999998
No 163
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.95 E-value=2.6e-28 Score=224.46 Aligned_cols=160 Identities=28% Similarity=0.407 Sum_probs=125.7
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF------------DVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
..++|+..+.||+|+||.||+|+.. +++.||||.+ .+|++++++++||||+++++++..++..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 3568999999999999999999864 7889999853 36888999999999999999999999999999
Q ss_pred EccCCCCHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccc
Q 040294 265 EYMTNGSLEKVLYS-------SNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAK 337 (360)
Q Consensus 265 e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~ 337 (360)
||+++++|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999864 2345899999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCC---ceeeecccccCcccCC
Q 040294 338 LLTGEDQ---SMTQTQTLATIGYMAP 360 (360)
Q Consensus 338 ~~~~~~~---~~~~~~~~gt~~Y~aP 360 (360)
....... ........||+.|+||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aP 195 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAP 195 (303)
T ss_dssp HCC---------------CCCTTCCH
T ss_pred eeccCCCccchhhhcccCCCccccCH
Confidence 7653321 1112345799999998
No 164
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=6.5e-28 Score=223.49 Aligned_cols=157 Identities=26% Similarity=0.385 Sum_probs=128.2
Q ss_pred CCCCC-CCeeccCCCccEEEEEc-cCCcEEEehh-----------hHHHHHHhhc-CCCCCeeEEEEEecCCCeEEEEEE
Q 040294 200 NGFSA-NNLIGRGSFGSVYKARL-QDGMEFAIKS-----------FDVECEVMKS-IHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 200 ~~f~~-~~~iG~G~~g~Vy~~~~-~~~~~vavK~-----------~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
+.|.+ .+.||+|+||.||+|+. .+++.||||. +.+|++++.+ .+||||+++++++.+++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 45666 37899999999999995 4789999984 4579999988 479999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc---EEEeecccccccCCC
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV---AHLSDFGIAKLLTGE 342 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DFGla~~~~~~ 342 (360)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.....
T Consensus 92 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999999764 35888999999999999999999 889999999999999988765 999999999875422
Q ss_pred CC-----ceeeecccccCcccCC
Q 040294 343 DQ-----SMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~-----~~~~~~~~gt~~Y~aP 360 (360)
.. .......+||+.|+||
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aP 190 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAP 190 (316)
T ss_dssp --------------CCSGGGCCH
T ss_pred CccccccccccccccCCcCccCh
Confidence 11 1112245699999998
No 165
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.95 E-value=2.7e-28 Score=238.57 Aligned_cols=152 Identities=28% Similarity=0.365 Sum_probs=124.9
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCC------C
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNE------D 258 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~------~ 258 (360)
.++|+..+.||+|+||.||+|+. .+++.||||.+ .+|+++++.++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46788899999999999999985 47889999843 4699999999999999999999654 4
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 67999999976 46666643 3788899999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
..... ..+..+||++|+||
T Consensus 214 ~~~~~---~~~~~~gt~~y~aP 232 (464)
T 3ttj_A 214 AGTSF---MMTPYVVTRYYRAP 232 (464)
T ss_dssp ---CC---CC----CCCTTCCH
T ss_pred cCCCc---ccCCCcccccccCH
Confidence 65332 23456899999998
No 166
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.95 E-value=2.6e-28 Score=227.65 Aligned_cols=159 Identities=25% Similarity=0.455 Sum_probs=130.9
Q ss_pred hCCCCCCCeeccCCCccEEEEEc------cCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL------QDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFR 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~------~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 260 (360)
.++|+..+.||+|+||.||+|++ .++..||||. +.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35688889999999999999984 2567899984 35689999999999999999999999999
Q ss_pred EEEEEccCCCCHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC---CCcEEEe
Q 040294 261 ALVLEYMTNGSLEKVLYSSN------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---NIVAHLS 331 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~ 331 (360)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998643 34888999999999999999999 889999999999999984 4569999
Q ss_pred ecccccccCCCCCceeeecccccCcccCC
Q 040294 332 DFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 332 DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|||+++...............||+.|+||
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 214 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPP 214 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred ccccccccccccccccCCCcCCCcceeCH
Confidence 99999876543322233445689999998
No 167
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.95 E-value=6.7e-28 Score=220.19 Aligned_cols=154 Identities=27% Similarity=0.462 Sum_probs=136.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++.+++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 356888899999999999999965 678899984 34689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 99999999999997643 5888999999999999999999 8999999999999999999999999999997654322
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
.....||+.|+||
T Consensus 169 ----~~~~~~~~~y~aP 181 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPP 181 (284)
T ss_dssp ----BCCCCSCGGGCCH
T ss_pred ----cccccCCCCcCCH
Confidence 2345799999998
No 168
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.4e-28 Score=224.28 Aligned_cols=156 Identities=24% Similarity=0.438 Sum_probs=131.6
Q ss_pred CCCCCeeccCCCccEEEEEcc-CC---cEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeE-EEEE
Q 040294 202 FSANNLIGRGSFGSVYKARLQ-DG---MEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFR-ALVL 264 (360)
Q Consensus 202 f~~~~~iG~G~~g~Vy~~~~~-~~---~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~-~lv~ 264 (360)
|...++||+|+||.||+|++. ++ ..||+|. +.+|++++++++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 445688999999999999853 22 3688873 45799999999999999999999876654 9999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+.+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999999887777899999999999999999999 88999999999999999999999999999987643321
Q ss_pred --ceeeecccccCcccCC
Q 040294 345 --SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 --~~~~~~~~gt~~Y~aP 360 (360)
........+|+.|+||
T Consensus 180 ~~~~~~~~~~~~~~y~aP 197 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTAL 197 (298)
T ss_dssp GCSCCSSCTTCGGGGSCH
T ss_pred cccccCcCCCCCccccCh
Confidence 1122345688899997
No 169
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.95 E-value=3.3e-28 Score=245.76 Aligned_cols=150 Identities=27% Similarity=0.468 Sum_probs=125.3
Q ss_pred eeccCCCccEEEEEcc---CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCCCC
Q 040294 207 LIGRGSFGSVYKARLQ---DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTNGS 271 (360)
Q Consensus 207 ~iG~G~~g~Vy~~~~~---~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g~ 271 (360)
.||+|+||.||+|.++ ++..||||. |.+|++++++++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 456799973 4679999999999999999999987 45899999999999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc-eeeec
Q 040294 272 LEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS-MTQTQ 350 (360)
Q Consensus 272 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~-~~~~~ 350 (360)
|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...... .....
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999876667999999999999999999999 889999999999999999999999999999986543221 11223
Q ss_pred ccccCcccCC
Q 040294 351 TLATIGYMAP 360 (360)
Q Consensus 351 ~~gt~~Y~aP 360 (360)
..+|+.||||
T Consensus 499 ~~~~~~y~AP 508 (613)
T 2ozo_A 499 GKWPLKWYAP 508 (613)
T ss_dssp ---CCTTSCH
T ss_pred CCCccceeCH
Confidence 3467899998
No 170
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.95 E-value=7.6e-29 Score=246.68 Aligned_cols=157 Identities=28% Similarity=0.508 Sum_probs=135.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
.++|+..+.||+|+||.||+|++.++..||||. |.+|++++++++|||||++++++.+ +..++|||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 356778899999999999999998888899983 5689999999999999999999977 66899999999
Q ss_pred CCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 269 NGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 269 ~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
+|+|.+++... ...+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.... ...
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~ 420 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTA 420 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HHT
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-eec
Confidence 99999999753 245889999999999999999999 8999999999999999999999999999998764321 111
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
.....+|+.|+||
T Consensus 421 ~~~~~~~~~y~aP 433 (535)
T 2h8h_A 421 RQGAKFPIKWTAP 433 (535)
T ss_dssp TCSTTSCGGGSCH
T ss_pred ccCCcCcccccCH
Confidence 2234578899998
No 171
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.95 E-value=6.8e-28 Score=218.96 Aligned_cols=155 Identities=26% Similarity=0.477 Sum_probs=129.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|...+.||+|+||.||+|+.. +++.||||. +.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888899999999999999975 789999984 34689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999997543 5788999999999999999999 8899999999999999999999999999998765432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 166 ---~~~~~~~~~~y~aP 179 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAP 179 (276)
T ss_dssp --------------CCT
T ss_pred ---ceecccCCccccCH
Confidence 12345689999998
No 172
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.95 E-value=6e-28 Score=223.57 Aligned_cols=158 Identities=32% Similarity=0.414 Sum_probs=134.5
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
..+.|+..+.||+|+||.||+|+.. +|+.||||. +.+|++++++++||||+++++++...+..++||||+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 3467888999999999999999865 689999984 467999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....... ..
T Consensus 107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~ 181 (314)
T 3com_A 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--AK 181 (314)
T ss_dssp TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--SC
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--cc
Confidence 999999999765567899999999999999999999 8999999999999999999999999999998765432 12
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
.....||+.|+||
T Consensus 182 ~~~~~~~~~y~aP 194 (314)
T 3com_A 182 RNTVIGTPFWMAP 194 (314)
T ss_dssp BCCCCSCGGGCCH
T ss_pred cCccCCCCCccCh
Confidence 2345799999998
No 173
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.95 E-value=5.1e-28 Score=223.94 Aligned_cols=153 Identities=32% Similarity=0.518 Sum_probs=124.3
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTNG 270 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~g 270 (360)
++|+..+.||+|+||.||+|++. ++.||||. |.+|++++++++||||+++++++.+. .++||||+++|
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~e~~~~~ 84 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGG 84 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEEECCTTC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEEEcCCCC
Confidence 45778899999999999999975 68899984 46799999999999999999998844 78999999999
Q ss_pred CHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc-EEEeecccccccCCCCCcee
Q 040294 271 SLEKVLYSSNC--ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV-AHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 271 ~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~-~ki~DFGla~~~~~~~~~~~ 347 (360)
+|.+++..... .+++...+.++.|+++||+|||..+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----- 159 (307)
T 2eva_A 85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----- 159 (307)
T ss_dssp BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----
Confidence 99999986543 3678889999999999999999333389999999999999988876 799999999865422
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
.....||+.|+||
T Consensus 160 ~~~~~gt~~y~aP 172 (307)
T 2eva_A 160 MTNNKGSAAWMAP 172 (307)
T ss_dssp -----CCTTSSCH
T ss_pred cccCCCCCceECh
Confidence 1234699999998
No 174
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.95 E-value=4.5e-28 Score=224.43 Aligned_cols=160 Identities=24% Similarity=0.469 Sum_probs=124.8
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc----CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCC--
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNED-- 258 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~-- 258 (360)
..++|...+.||+|+||.||+|+.. ++..||||. +.+|++++++++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888899999999999999854 345799984 446899999999999999999998765
Q ss_pred ---eEEEEEEccCCCCHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEE
Q 040294 259 ---FRALVLEYMTNGSLEKVLYS-----SNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHL 330 (360)
Q Consensus 259 ---~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki 330 (360)
..++||||+++|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 34999999999999999853 2345899999999999999999999 899999999999999999999999
Q ss_pred eecccccccCCCCCceeeecccccCcccCC
Q 040294 331 SDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 331 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+|||+++...............+++.|+||
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 218 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218 (313)
T ss_dssp CSCSCC----------------CCGGGSCH
T ss_pred eecCcceecccccccCcccccCCCccccCc
Confidence 999999876544322233345678899998
No 175
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.95 E-value=4e-28 Score=221.36 Aligned_cols=157 Identities=27% Similarity=0.478 Sum_probs=130.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEccC----CcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQD----GMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~----~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
.++|...+.||+|+||.||+|+... +..||+|. +.+|++++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4568888999999999999998542 33589874 45699999999999999999998765 4689
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999876667899999999999999999999 899999999999999999999999999999876543
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. ........+|+.|+||
T Consensus 167 ~-~~~~~~~~~~~~y~aP 183 (281)
T 3cc6_A 167 D-YYKASVTRLPIKWMSP 183 (281)
T ss_dssp -------CCCCCGGGCCH
T ss_pred c-ccccccCCCCcceeCc
Confidence 2 1122345678899998
No 176
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=5.9e-28 Score=223.61 Aligned_cols=157 Identities=27% Similarity=0.350 Sum_probs=130.0
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999964 788999984 34689999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999999754 35889999999999999999999 8899999999999999999999999999998765432
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
. .......||+.|+||
T Consensus 189 ~-~~~~~~~~~~~y~aP 204 (309)
T 2h34_A 189 L-TQLGNTVGTLYYMAP 204 (309)
T ss_dssp ---------CCGGGCCG
T ss_pred c-ccccccCCCcCccCH
Confidence 1 122345799999998
No 177
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.95 E-value=1.9e-27 Score=219.12 Aligned_cols=158 Identities=24% Similarity=0.401 Sum_probs=132.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh---------------hHHHHHHhhcCCCCCeeEEEEEe--cCCCeE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS---------------FDVECEVMKSIHHRNLVKIISSC--SNEDFR 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~---------------~~~E~~~l~~l~hpniv~l~~~~--~~~~~~ 260 (360)
.++|...+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 467999999999999999999964 788999974 34689999999999999999998 445578
Q ss_pred EEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 261 ALVLEYMTNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
++||||++++ |.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999887 76666543 446899999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCceeeecccccCcccCC
Q 040294 340 TGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.............||+.|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aP 180 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPP 180 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCH
T ss_pred CccccccccccCCCCCCCcCh
Confidence 543322333456799999998
No 178
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.95 E-value=2.8e-28 Score=230.46 Aligned_cols=153 Identities=26% Similarity=0.399 Sum_probs=133.7
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
++|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46888899999999999999965 788999974 45799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCceeecCCCcEEEeecccccccCCCCCc
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFST-PIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~-~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~ 345 (360)
+++|+|.+++.... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 113 ~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999997643 5888899999999999999999 64 8999999999999999999999999999865322
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 186 -~~~~~~gt~~y~aP 199 (360)
T 3eqc_A 186 -MANSFVGTRSYMSP 199 (360)
T ss_dssp -C----CCCCTTCCH
T ss_pred -cccCCCCCCCeECH
Confidence 12345799999998
No 179
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.95 E-value=6.4e-28 Score=219.96 Aligned_cols=154 Identities=29% Similarity=0.466 Sum_probs=132.9
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------------FDVECEVMKSIHHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 261 (360)
++|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++.+++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45788899999999999999975 789999873 467999999999999999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC----cEEEeeccccc
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI----VAHLSDFGIAK 337 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~DFGla~ 337 (360)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999999753 35889999999999999999999 88999999999999998877 89999999998
Q ss_pred ccCCCCCceeeecccccCcccCC
Q 040294 338 LLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 338 ~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
...... ......||+.|+||
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aP 180 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAP 180 (283)
T ss_dssp ECC-----------CCCGGGCCH
T ss_pred eccCCC---cccccCCCcCccCc
Confidence 765332 12345699999998
No 180
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=6.6e-28 Score=220.66 Aligned_cols=156 Identities=26% Similarity=0.460 Sum_probs=132.1
Q ss_pred CCCCCC-eeccCCCccEEEEEcc---CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 201 GFSANN-LIGRGSFGSVYKARLQ---DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 201 ~f~~~~-~iG~G~~g~Vy~~~~~---~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
+|...+ .||+|+||.||+|... ++..||||. +.+|++++++++||||+++++++. .+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEE
Confidence 344444 8999999999999853 577899974 457999999999999999999995 45689999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999876667999999999999999999999 88999999999999999999999999999998754332
Q ss_pred ce-eeecccccCcccCC
Q 040294 345 SM-TQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~-~~~~~~gt~~Y~aP 360 (360)
.. ......||+.|+||
T Consensus 166 ~~~~~~~~~~~~~y~aP 182 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAP 182 (287)
T ss_dssp EECCCCSSCCCGGGCCH
T ss_pred eeeccccccccccccCH
Confidence 11 12234578999998
No 181
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.95 E-value=1.2e-27 Score=222.48 Aligned_cols=154 Identities=27% Similarity=0.470 Sum_probs=131.8
Q ss_pred CCCCCeeccCCCccEEEEEcc-----CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecC--CCeEEE
Q 040294 202 FSANNLIGRGSFGSVYKARLQ-----DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSN--EDFRAL 262 (360)
Q Consensus 202 f~~~~~iG~G~~g~Vy~~~~~-----~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 262 (360)
|+..+.||+|+||.||++.+. +++.||||. +.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 477889999999999988643 678899984 4679999999999999999999987 467899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++|+|.+++.... +++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997653 889999999999999999999 889999999999999999999999999999987654
Q ss_pred CCc-eeeecccccCcccCC
Q 040294 343 DQS-MTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~-~~~~~~~gt~~Y~aP 360 (360)
... .......||+.|+||
T Consensus 188 ~~~~~~~~~~~~~~~y~aP 206 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAP 206 (318)
T ss_dssp CSEEEC---CCCCGGGCCH
T ss_pred ccccccccCCCCCceeeCh
Confidence 322 122345688899998
No 182
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.95 E-value=3.6e-28 Score=227.11 Aligned_cols=156 Identities=26% Similarity=0.435 Sum_probs=129.4
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
..++|+..+.||+|+||.||+|+. .+++.||||.+ .+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 456799999999999999999985 47889999843 4799999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee-----cCCCcEEEeecccccc
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL-----DDNIVAHLSDFGIAKL 338 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl-----~~~~~~ki~DFGla~~ 338 (360)
|||+++ +|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 112 ~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999985 9999997653 5889999999999999999999 8899999999999999 4555699999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
..... .......||+.|+||
T Consensus 187 ~~~~~--~~~~~~~~t~~y~aP 206 (329)
T 3gbz_A 187 FGIPI--RQFTHEIITLWYRPP 206 (329)
T ss_dssp HC-------------CCTTCCH
T ss_pred cCCcc--cccCCCcCCccccCH
Confidence 65332 123345789999998
No 183
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=8.2e-28 Score=224.25 Aligned_cols=158 Identities=29% Similarity=0.502 Sum_probs=135.1
Q ss_pred CCCCCCCeeccCCCccEEEEEc-----cCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCC--eEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-----QDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNED--FRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-----~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~ 261 (360)
++|+..+.||+|+||.||+|++ .+++.||||. +.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577789999999999999983 3688999984 567999999999999999999987654 689
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999877667899999999999999999999 88999999999999999999999999999998754
Q ss_pred CCCcee-eecccccCcccCC
Q 040294 342 EDQSMT-QTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~-~~~~~gt~~Y~aP 360 (360)
...... .....+|..|+||
T Consensus 198 ~~~~~~~~~~~~~~~~y~aP 217 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAP 217 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCH
T ss_pred cccccccccCCCCceeEECc
Confidence 432211 2234578889998
No 184
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=4.5e-28 Score=230.04 Aligned_cols=151 Identities=26% Similarity=0.427 Sum_probs=126.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCCC------
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNED------ 258 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~~------ 258 (360)
.+.|+..+.||+|+||.||+|+. .+|+.||||.+ .+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35688889999999999999996 57899999853 46999999999999999999998763
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
..++||||+ +++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 88999999763 5788899999999999999999 89999999999999999999999999999997
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ....+||++|+||
T Consensus 178 ~~~~-----~~~~~~t~~y~aP 194 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAP 194 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCT
T ss_pred cccc-----cCcCcCCCCcCCH
Confidence 6432 2345789999998
No 185
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.1e-28 Score=246.66 Aligned_cols=144 Identities=19% Similarity=0.175 Sum_probs=113.3
Q ss_pred eccCCCccEEEEE-ccCCcEEEehh---------------------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEEEE
Q 040294 208 IGRGSFGSVYKAR-LQDGMEFAIKS---------------------FDVECEVMKSI-HHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 208 iG~G~~g~Vy~~~-~~~~~~vavK~---------------------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.+.|+.|.++.++ ...|+.||+|. |.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3455555555544 33577777763 56799999999 6999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||++||+|.+++...+ .++.. .|+.||+.||+|+| +.+||||||||+|||+++++.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~- 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC- 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred ecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC-
Confidence 9999999999997654 45543 48999999999999 9999999999999999999999999999999765432
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
....+.+||++||||
T Consensus 394 -~~~~t~vGTp~YmAP 408 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVN 408 (569)
T ss_dssp -CCSHHHHHHHHHHHH
T ss_pred -ccccCceechhhccH
Confidence 223457899999997
No 186
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.95 E-value=5.9e-28 Score=225.68 Aligned_cols=156 Identities=30% Similarity=0.486 Sum_probs=131.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 346788899999999999999965 689999984 346999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 104 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999998876544 35889999999999999999999 88999999999999999999999999999987654321
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 180 --~~~~~~~t~~y~aP 193 (331)
T 4aaa_A 180 --VYDDEVATRWYRAP 193 (331)
T ss_dssp ------CCCCCTTCCH
T ss_pred --ccCCCcCCccccCc
Confidence 22345799999998
No 187
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.95 E-value=2.3e-27 Score=217.43 Aligned_cols=155 Identities=30% Similarity=0.469 Sum_probs=132.6
Q ss_pred CCCCCCeeccCCCccEEEEEc-cCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccC
Q 040294 201 GFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
.|....+||+|+||.||+|+. .+++.||||. +..|+.++++++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455567999999999999995 5788999984 4579999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC-CCcEEEeecccccccCCCCCc
Q 040294 269 NGSLEKVLYSSN--CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD-NIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 269 ~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DFGla~~~~~~~~~ 345 (360)
+++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~- 178 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP- 178 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-
Confidence 999999997653 24568888889999999999999 889999999999999987 89999999999987654321
Q ss_pred eeeecccccCcccCC
Q 040294 346 MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 ~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 179 -~~~~~~~~~~y~aP 192 (295)
T 2clq_A 179 -CTETFTGTLQYMAP 192 (295)
T ss_dssp ---CCCCCCGGGCCH
T ss_pred -cccccCCCccccCh
Confidence 22345799999998
No 188
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.95 E-value=2.7e-28 Score=224.48 Aligned_cols=157 Identities=27% Similarity=0.396 Sum_probs=133.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
.+.|+..+.||+|+||.||+|+.. +++.||+|. +..|++++++++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 456888899999999999999975 688999974 45699999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQ 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HH
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 9999999998765567899999999999999999999 889999999999999999999999999998643211 11
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 173 ~~~~~~~~~~y~aP 186 (302)
T 2j7t_A 173 KRDSFIGTPYWMAP 186 (302)
T ss_dssp C-----CCGGGCCH
T ss_pred ccccccCChhhcCC
Confidence 12345689999998
No 189
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.95 E-value=7e-28 Score=224.69 Aligned_cols=155 Identities=33% Similarity=0.590 Sum_probs=131.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEE--Eehh------------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEF--AIKS------------FDVECEVMKSI-HHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~v--avK~------------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 263 (360)
++|+..+.||+|+||.||+|+.. ++..+ |+|. +.+|+++++++ +||||+++++++.+++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888899999999999999865 56544 7763 46799999999 899999999999999999999
Q ss_pred EEccCCCCHHHHHhcCC---------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcE
Q 040294 264 LEYMTNGSLEKVLYSSN---------------CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVA 328 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ 328 (360)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997643 36899999999999999999999 8999999999999999999999
Q ss_pred EEeecccccccCCCCCceeeecccccCcccCC
Q 040294 329 HLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 329 ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+|||+++..... .......+|+.|+||
T Consensus 182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aP 210 (327)
T 1fvr_A 182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAI 210 (327)
T ss_dssp EECCTTCEESSCEE---CCC----CCTTTCCH
T ss_pred EEcccCcCcccccc---ccccCCCCCccccCh
Confidence 99999999853321 112334578899998
No 190
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.95 E-value=1.2e-27 Score=219.70 Aligned_cols=156 Identities=27% Similarity=0.455 Sum_probs=137.5
Q ss_pred HhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------------HHHHHHhhcCC-CCCeeEEEEEec
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------------DVECEVMKSIH-HRNLVKIISSCS 255 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------------~~E~~~l~~l~-hpniv~l~~~~~ 255 (360)
..++|+..+.||+|+||.||+|+.. +++.||||.+ .+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3567888999999999999999965 7889999853 35888999996 999999999999
Q ss_pred CCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccc
Q 040294 256 NEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGI 335 (360)
Q Consensus 256 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGl 335 (360)
.++..++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999764 35889999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCCceeeecccccCcccCC
Q 040294 336 AKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 336 a~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
++...... ......||+.|+||
T Consensus 171 ~~~~~~~~---~~~~~~~~~~y~aP 192 (298)
T 1phk_A 171 SCQLDPGE---KLREVCGTPSYLAP 192 (298)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCH
T ss_pred hhhcCCCc---ccccccCCccccCH
Confidence 98765432 22345789999998
No 191
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.95 E-value=4.5e-28 Score=232.24 Aligned_cols=155 Identities=32% Similarity=0.489 Sum_probs=129.1
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehhh-------HHHHHHhhcCCCCCeeEEEEEecCC------CeEEEEEEc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF-------DVECEVMKSIHHRNLVKIISSCSNE------DFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~-------~~E~~~l~~l~hpniv~l~~~~~~~------~~~~lv~e~ 266 (360)
..|+..++||+|+||.||+|+...+..+|+|.+ .+|+++++.++|||||+++++|... ...++||||
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~ 119 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence 357888999999999999999877777998754 4799999999999999999998543 348899999
Q ss_pred cCCCCHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec-CCCcEEEeecccccccCCCC
Q 040294 267 MTNGSLEKVLY--SSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD-DNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 267 ~~~g~L~~~l~--~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DFGla~~~~~~~ 343 (360)
++++.+..... .....+++..+..++.|+++||+||| +.+|+||||||+|||++ .++.+||+|||+|+.+....
T Consensus 120 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp CSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred cCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 98754443332 23456889999999999999999999 89999999999999999 79999999999999865433
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 197 ---~~~~~~~t~~y~aP 210 (394)
T 4e7w_A 197 ---PNVSYICSRYYRAP 210 (394)
T ss_dssp ---CCCSSCSCGGGCCH
T ss_pred ---CCcccccCcCccCH
Confidence 22346789999998
No 192
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.95 E-value=7.2e-28 Score=232.70 Aligned_cols=154 Identities=33% Similarity=0.529 Sum_probs=128.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh-------HHHHHHhhcCCCCCeeEEEEEecC------CCeEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF-------DVECEVMKSIHHRNLVKIISSCSN------EDFRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~-------~~E~~~l~~l~hpniv~l~~~~~~------~~~~~lv~e 265 (360)
..|+..++||+|+||.||+|+.. +++.||||.+ .+|++++++++|||||+++++|.. ....++|||
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 35778899999999999999975 6899999854 469999999999999999998843 224679999
Q ss_pred ccCCCCHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC-CcEEEeecccccccCC
Q 040294 266 YMTNGSLEKVLY---SSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN-IVAHLSDFGIAKLLTG 341 (360)
Q Consensus 266 ~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DFGla~~~~~ 341 (360)
|+++ ++.+.+. .....+++..+..++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+++.+..
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 9986 6666554 23456899999999999999999999 8999999999999999955 6789999999997654
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. .....+||++|+||
T Consensus 210 ~~---~~~~~~~t~~y~aP 225 (420)
T 1j1b_A 210 GE---PNVSYICSRYYRAP 225 (420)
T ss_dssp TC---CCCSCCSCTTSCCH
T ss_pred CC---CceeeeeCCCcCCH
Confidence 33 12346799999998
No 193
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.95 E-value=2.1e-27 Score=217.55 Aligned_cols=151 Identities=30% Similarity=0.450 Sum_probs=130.0
Q ss_pred CCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecC----CCeEEEE
Q 040294 202 FSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSN----EDFRALV 263 (360)
Q Consensus 202 f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv 263 (360)
|...+.||+|+||.||+|.. .++..||+|. +.+|++++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 56677899999999999986 4678899863 4579999999999999999998864 4568999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCceeec-CCCcEEEeecccccccC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTP--IIHCDLKPHNVLLD-DNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~--iiHrdlk~~NiLl~-~~~~~ki~DFGla~~~~ 340 (360)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++....
T Consensus 108 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999999999754 35888999999999999999999 777 99999999999998 78999999999998654
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
... .....||+.|+||
T Consensus 184 ~~~----~~~~~~t~~y~aP 199 (290)
T 1t4h_A 184 ASF----AKAVIGTPEFMAP 199 (290)
T ss_dssp TTS----BEESCSSCCCCCG
T ss_pred ccc----cccccCCcCcCCH
Confidence 332 2345799999998
No 194
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.95 E-value=1.4e-27 Score=222.68 Aligned_cols=151 Identities=23% Similarity=0.418 Sum_probs=132.6
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------hHHHHHHhhcCC-CCCeeEEEEEecC--CCeEEEEEEcc
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------FDVECEVMKSIH-HRNLVKIISSCSN--EDFRALVLEYM 267 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------~~~E~~~l~~l~-hpniv~l~~~~~~--~~~~~lv~e~~ 267 (360)
++|+..+.||+|+||.||+|+. .+++.||||. +.+|++++++++ ||||+++++++.+ ....++||||+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~ 115 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV 115 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence 5688889999999999999985 5789999984 467999999997 9999999999987 66789999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC-cEEEeecccccccCCCCCce
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI-VAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DFGla~~~~~~~~~~ 346 (360)
++++|.+++.. +++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||+++......
T Consensus 116 ~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--- 185 (330)
T 3nsz_A 116 NNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--- 185 (330)
T ss_dssp CCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC---
T ss_pred CchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC---
Confidence 99999998853 778889999999999999999 89999999999999999766 89999999998765433
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......||..|+||
T Consensus 186 ~~~~~~~~~~y~aP 199 (330)
T 3nsz_A 186 EYNVRVASRYFKGP 199 (330)
T ss_dssp CCCSCCSCGGGCCH
T ss_pred ccccccccccccCh
Confidence 22345789999998
No 195
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.95 E-value=2.7e-27 Score=221.66 Aligned_cols=160 Identities=27% Similarity=0.450 Sum_probs=136.4
Q ss_pred HhCCCCCCCeeccCCCccEEEEEccCCcEEEehhh--------HHHHHHhhc--CCCCCeeEEEEEecCCC----eEEEE
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF--------DVECEVMKS--IHHRNLVKIISSCSNED----FRALV 263 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~--------~~E~~~l~~--l~hpniv~l~~~~~~~~----~~~lv 263 (360)
..++|...+.||+|+||.||+|+. +++.||||.+ ..|++++.. ++||||+++++++...+ ..++|
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 456799999999999999999998 5889999854 467788776 78999999999998876 78999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc-----CCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFG-----FSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~-----~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
|||+++|+|.+++... .+++..+..++.|++.||+|||.. .+.+|+||||||+||+++.++.+||+|||+++.
T Consensus 119 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~ 196 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 196 (342)
T ss_dssp ECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCcee
Confidence 9999999999999764 588999999999999999999932 157899999999999999999999999999987
Q ss_pred cCCCCCce--eeecccccCcccCC
Q 040294 339 LTGEDQSM--TQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~--~~~~~~gt~~Y~aP 360 (360)
........ ......||+.|+||
T Consensus 197 ~~~~~~~~~~~~~~~~gt~~y~aP 220 (342)
T 1b6c_B 197 HDSATDTIDIAPNHRVGTKRYMAP 220 (342)
T ss_dssp EETTTTEEEECCCSCCCCGGGCCH
T ss_pred ccccccccccccccCCcCcccCCH
Confidence 65443221 22345799999998
No 196
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.95 E-value=2e-27 Score=219.02 Aligned_cols=154 Identities=32% Similarity=0.427 Sum_probs=136.3
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEc
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
+.|+..+.||+|+||.||+|+. .+++.||||. +.+|+.++++++||||+++++++..++..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4578889999999999999985 4788999984 46799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCce
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSM 346 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~ 346 (360)
+++++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 174 (303)
T 3a7i_A 102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--I 174 (303)
T ss_dssp CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--C
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--c
Confidence 999999999864 35889999999999999999999 8899999999999999999999999999998765432 1
Q ss_pred eeecccccCcccCC
Q 040294 347 TQTQTLATIGYMAP 360 (360)
Q Consensus 347 ~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 175 ~~~~~~~~~~y~aP 188 (303)
T 3a7i_A 175 KRNTFVGTPFWMAP 188 (303)
T ss_dssp CBCCCCSCGGGCCH
T ss_pred ccCccCCCcCccCH
Confidence 22345799999998
No 197
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.95 E-value=5.1e-28 Score=225.16 Aligned_cols=153 Identities=31% Similarity=0.421 Sum_probs=132.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------------hHHHHHHhhcCCCCCeeEEEEEecCCCe
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------------FDVECEVMKSIHHRNLVKIISSCSNEDF 259 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------------~~~E~~~l~~l~hpniv~l~~~~~~~~~ 259 (360)
++|...+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++..++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 46888999999999999999864 688999984 457999999999999999999998766
Q ss_pred EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc---EEEeecccc
Q 040294 260 RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV---AHLSDFGIA 336 (360)
Q Consensus 260 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DFGla 336 (360)
.++||||+++|+|.+++... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 164 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 164 (322)
T ss_dssp EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence 79999999999999988654 46889999999999999999999 889999999999999987654 999999999
Q ss_pred cccCCCCCceeeecccccCcccCC
Q 040294 337 KLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 337 ~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+...... ......||+.|+||
T Consensus 165 ~~~~~~~---~~~~~~gt~~y~aP 185 (322)
T 2ycf_A 165 KILGETS---LMRTLCGTPTYLAP 185 (322)
T ss_dssp EECCCCH---HHHHHHSCCTTCCH
T ss_pred eeccccc---ccccccCCcCccCc
Confidence 8764321 12345799999998
No 198
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.95 E-value=1.7e-27 Score=220.29 Aligned_cols=157 Identities=28% Similarity=0.497 Sum_probs=125.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|++++++++||||+++++++..++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 34688899999999999999985 5789999984 34699999999999999999999999999999
Q ss_pred EEccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 264 LEYMTNGSLEKVLYS---SNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
|||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 3456889999999999999999999 8899999999999999999999999999998765
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ......||+.|+||
T Consensus 188 ~~~~--~~~~~~~~~~y~aP 205 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSP 205 (310)
T ss_dssp -------------CCSSCCH
T ss_pred CCCc--cccccCCCeeEeCh
Confidence 3321 22345689999998
No 199
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94 E-value=1.4e-27 Score=219.36 Aligned_cols=155 Identities=30% Similarity=0.497 Sum_probs=135.5
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
++|+..+.||+|+||.||+|+.. +++.||||.+ .+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888899999999999999965 7899999843 468999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 266 YMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
|++ |+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 998 69999987653 45888899999999999999999 88999999999999999999999999999987653321
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 159 --~~~~~~~~~~y~aP 172 (299)
T 2r3i_A 159 --TYTHEVVTLWYRAP 172 (299)
T ss_dssp --CTTSCBCCCTTCCH
T ss_pred --ccCcccccccccCc
Confidence 22345689999998
No 200
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.94 E-value=7.3e-28 Score=220.19 Aligned_cols=155 Identities=27% Similarity=0.343 Sum_probs=123.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhhH-------------HHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSFD-------------VECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~~-------------~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+. .+++.||||.+. .+...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35688889999999999999996 578999998541 2334578889999999999999999999999
Q ss_pred EccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 265 EYMTNGSLEKVLYS---SNCILDILQRLNIMINVTSALEYLHFGFST-PIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 265 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~-~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
||++ |+|.+++.. ....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 488777653 4557899999999999999999999 76 99999999999999999999999999998765
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
... ......||+.|+||
T Consensus 162 ~~~---~~~~~~~t~~y~aP 178 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAP 178 (290)
T ss_dssp -----------CCCCCCSCH
T ss_pred ccc---cccccCCCccccCh
Confidence 432 22334799999998
No 201
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.94 E-value=4.1e-28 Score=228.20 Aligned_cols=156 Identities=21% Similarity=0.281 Sum_probs=125.9
Q ss_pred CCCCCCCeeccCCCccEEEEEcc----CCcEEEehhh----------------------HHHHHHhhcCCCCCeeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKSF----------------------DVECEVMKSIHHRNLVKIISS 253 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~~----------------------~~E~~~l~~l~hpniv~l~~~ 253 (360)
++|...+.||+|+||.||+|+.. ++..+|||.+ ..|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999975 5678898732 246677788899999999999
Q ss_pred ecC----CCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC--c
Q 040294 254 CSN----EDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI--V 327 (360)
Q Consensus 254 ~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~--~ 327 (360)
+.. ....++||||+ +++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 987 67899999999 999999997654 6899999999999999999999 88999999999999999877 9
Q ss_pred EEEeecccccccCCCCCc-----eeeecccccCcccCC
Q 040294 328 AHLSDFGIAKLLTGEDQS-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 328 ~ki~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~aP 360 (360)
+||+|||+++.+...... .......||+.|+||
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 229 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSL 229 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCH
Confidence 999999999876432111 111345799999998
No 202
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=1.3e-27 Score=224.49 Aligned_cols=154 Identities=27% Similarity=0.442 Sum_probs=137.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh----------------------------hHHHHHHhhcCCCCCeeEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS----------------------------FDVECEVMKSIHHRNLVKI 250 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~----------------------------~~~E~~~l~~l~hpniv~l 250 (360)
.++|...+.||+|+||.||+|+. +++.||||. +.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788999999999999999999 899999973 3568999999999999999
Q ss_pred EEEecCCCeEEEEEEccCCCCHHHH------HhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCC-CCeEEccCCCCceee
Q 040294 251 ISSCSNEDFRALVLEYMTNGSLEKV------LYSS-NCILDILQRLNIMINVTSALEYLHFGFS-TPIIHCDLKPHNVLL 322 (360)
Q Consensus 251 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~-~~iiHrdlk~~NiLl 322 (360)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||+||| + .+|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5442 456899999999999999999999 7 899999999999999
Q ss_pred cCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 323 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 323 ~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.++.+||+|||+++..... ......||+.|+||
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aP 219 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPP 219 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCG
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCc
Confidence 99999999999999876433 23456799999998
No 203
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.94 E-value=2.4e-27 Score=217.20 Aligned_cols=159 Identities=27% Similarity=0.434 Sum_probs=133.5
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEe-cCCCeEEEEEEc
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSC-SNEDFRALVLEY 266 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e~ 266 (360)
..++|+..+.||+|+||.||+|+. .+++.||||. +..|+++++.++|++++..+.++ ..++..++||||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 457899999999999999999995 5788999983 57899999999988877666555 667788999999
Q ss_pred cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee---cCCCcEEEeecccccccCCCC
Q 040294 267 MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL---DDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 267 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DFGla~~~~~~~ 343 (360)
+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++......
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 9 99999999866667999999999999999999999 8899999999999999 788999999999998865443
Q ss_pred Cc-----eeeecccccCcccCC
Q 040294 344 QS-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~-----~~~~~~~gt~~Y~aP 360 (360)
.. .......||+.|+||
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCH
T ss_pred cCccCCCCcccccCCCccccch
Confidence 21 122356799999998
No 204
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.94 E-value=1.3e-27 Score=220.57 Aligned_cols=153 Identities=29% Similarity=0.501 Sum_probs=134.9
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEcc
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~ 267 (360)
++|...+.||+|+||.||+|+.. +|+.||+|. +.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 45788899999999999999965 789999984 457999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee---cCCCcEEEeecccccccCCCCC
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL---DDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DFGla~~~~~~~~ 344 (360)
++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++......
T Consensus 89 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~- 163 (304)
T 2jam_A 89 SGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI- 163 (304)
T ss_dssp CSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT-
T ss_pred CCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc-
Confidence 9999999986543 5788899999999999999999 8899999999999999 788999999999998643221
Q ss_pred ceeeecccccCcccCC
Q 040294 345 SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~~~~~~~gt~~Y~aP 360 (360)
.....||+.|+||
T Consensus 164 ---~~~~~~~~~y~aP 176 (304)
T 2jam_A 164 ---MSTACGTPGYVAP 176 (304)
T ss_dssp ---THHHHSCCCBCCT
T ss_pred ---cccccCCCCccCh
Confidence 2345699999998
No 205
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.8e-28 Score=226.09 Aligned_cols=159 Identities=30% Similarity=0.441 Sum_probs=132.0
Q ss_pred HHhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh----------hHHHHHHhhcC-CCCCeeEEEEEecC------CC
Q 040294 197 RATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS----------FDVECEVMKSI-HHRNLVKIISSCSN------ED 258 (360)
Q Consensus 197 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~----------~~~E~~~l~~l-~hpniv~l~~~~~~------~~ 258 (360)
...+.|+..+.||+|+||.||+|+. .+++.||||. +.+|+++++++ +||||+++++++.. .+
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~ 100 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 100 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence 3567788999999999999999996 4789999984 46799999998 79999999999976 46
Q ss_pred eEEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAK 337 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~ 337 (360)
..++||||+++|+|.+++.... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 177 (326)
T 2x7f_A 101 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 177 (326)
T ss_dssp EEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred eEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence 8899999999999999997643 45888899999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCCceeeecccccCcccCC
Q 040294 338 LLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 338 ~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
...... .......||+.|+||
T Consensus 178 ~~~~~~--~~~~~~~~~~~y~aP 198 (326)
T 2x7f_A 178 QLDRTV--GRRNTFIGTPYWMAP 198 (326)
T ss_dssp ---------------CCGGGCCH
T ss_pred ecCcCc--cccccccCCccccCh
Confidence 764322 122345799999998
No 206
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=2e-28 Score=233.13 Aligned_cols=151 Identities=17% Similarity=0.238 Sum_probs=124.3
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh--------------HHHH---HHhhcCCCCCeeEEE-------EEe
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF--------------DVEC---EVMKSIHHRNLVKII-------SSC 254 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~--------------~~E~---~~l~~l~hpniv~l~-------~~~ 254 (360)
++|...+.||+|+||.||+|+. .+|+.||||.+ .+|+ +++++++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 4677789999999999999996 57899999853 4788 556667899999998 666
Q ss_pred cCCC-----------------eEEEEEEccCCCCHHHHHhcCCC------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeE
Q 040294 255 SNED-----------------FRALVLEYMTNGSLEKVLYSSNC------ILDILQRLNIMINVTSALEYLHFGFSTPII 311 (360)
Q Consensus 255 ~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~i~~~l~yLH~~~~~~ii 311 (360)
..++ ..++||||+ +|+|.+++..... .+++..+..|+.|++.||+||| +.+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv 228 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 228 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 5543 278999999 6899999975322 2335788889999999999999 88999
Q ss_pred EccCCCCceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 312 HCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 312 Hrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||||||+|||++.++.+||+|||+|+.... .....+| +.|+||
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aP 271 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPP 271 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccCh
Confidence 999999999999999999999999986432 2345568 999998
No 207
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.94 E-value=1.4e-27 Score=242.65 Aligned_cols=157 Identities=27% Similarity=0.441 Sum_probs=130.9
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc----CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~----~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
.++|+..+.||+|+||.||+|++. .+..||||. +..|+.++++++|||||++++++.+ +..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEE
Confidence 346777899999999999999864 245688873 4579999999999999999999964 56899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999877667899999999999999999999 889999999999999999999999999999976543
Q ss_pred CCceeeecccccCcccCC
Q 040294 343 DQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~~~~~~~gt~~Y~aP 360 (360)
. ........+|+.||||
T Consensus 545 ~-~~~~~~~~~t~~y~aP 561 (656)
T 2j0j_A 545 T-YYKASKGKLPIKWMAP 561 (656)
T ss_dssp ----------CCGGGCCH
T ss_pred c-ceeccCCCCCcceeCH
Confidence 2 1222344678899998
No 208
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.94 E-value=7.8e-28 Score=225.51 Aligned_cols=155 Identities=28% Similarity=0.384 Sum_probs=132.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh------------HHHHHH-hhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF------------DVECEV-MKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~------------~~E~~~-l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+. .+|+.||||.+ ..|..+ ++.++||||+++++++..++..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45788889999999999999995 57899999854 234444 77889999999999999999999999
Q ss_pred EccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 265 EYMTNGSLEKVLYS---SNCILDILQRLNIMINVTSALEYLHFGFST-PIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 265 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~-~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
||+++ +|.+++.. ....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 205 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceecc
Confidence 99985 99888764 4557899999999999999999999 65 99999999999999999999999999998764
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
... ......||+.|+||
T Consensus 206 ~~~---~~~~~~gt~~y~aP 222 (340)
T 3an0_A 206 DSV---AKTIDAGCKPYMAP 222 (340)
T ss_dssp CHH---HHHHSSCCCCCCCH
T ss_pred ccc---ccccCCCCccccCc
Confidence 321 22335799999998
No 209
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.94 E-value=9e-28 Score=222.65 Aligned_cols=159 Identities=25% Similarity=0.355 Sum_probs=132.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEec----CCCeEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCS----NEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~----~~~~~~l 262 (360)
.++|+..+.||+|+||.||+++. .+++.||||. +.+|++++++++||||+++++++. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 34688889999999999999996 5789999984 457999999999999999999986 3457899
Q ss_pred EEEccCCCCHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 263 VLEYMTNGSLEKVLYS---SNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
||||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 3456899999999999999999999 889999999999999999999999999998865
Q ss_pred CCCCCc-------eeeecccccCcccCC
Q 040294 340 TGEDQS-------MTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~-------~~~~~~~gt~~Y~aP 360 (360)
...... .......||+.|+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 212 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAP 212 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCG
T ss_pred ccccccccccccccccccccCCcccCCH
Confidence 321100 001234579999998
No 210
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.94 E-value=5.1e-28 Score=220.13 Aligned_cols=157 Identities=30% Similarity=0.473 Sum_probs=132.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEec--CCCeEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCS--NEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~--~~~~~~l 262 (360)
.++|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++. .++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357888899999999999999965 788999974 456999999999999999999874 4678999
Q ss_pred EEEccCCCCHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHhhhcCCCC-----eEEccCCCCceeecCCCcEEEeecc
Q 040294 263 VLEYMTNGSLEKVLYSS---NCILDILQRLNIMINVTSALEYLHFGFSTP-----IIHCDLKPHNVLLDDNIVAHLSDFG 334 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~-----iiHrdlk~~NiLl~~~~~~ki~DFG 334 (360)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999743 334899999999999999999999 666 9999999999999999999999999
Q ss_pred cccccCCCCCceeeecccccCcccCC
Q 040294 335 IAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+++....... ......||+.|+||
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aP 185 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSP 185 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCH
T ss_pred hheeeccccc--cccccCCCccccCh
Confidence 9987653321 12245689999998
No 211
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.1e-27 Score=244.87 Aligned_cols=148 Identities=25% Similarity=0.426 Sum_probs=128.6
Q ss_pred CCCCCCCeeccCCCccEEEEEcc--CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCCCe-----E
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ--DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNEDF-----R 260 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~--~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~~~-----~ 260 (360)
++|++.+.||+|+||.||+|+.. +++.||||. +..|++++++++|||||+++++|...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67889999999999999999964 688999984 3568999999999999999999987654 7
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
|+||||++|++|.+++.. .+++.++..++.||+.||+||| +.+|+||||||+|||++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999987754 5899999999999999999999 8899999999999999986 89999999998765
Q ss_pred CCCCceeeecccccCcccCC
Q 040294 341 GEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~~~~~~~gt~~Y~aP 360 (360)
.. ....||++||||
T Consensus 233 ~~------~~~~gt~~y~aP 246 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAP 246 (681)
T ss_dssp CC------SCCCCCTTTSCT
T ss_pred cC------CccCCCccccCH
Confidence 32 345799999999
No 212
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.94 E-value=2.8e-27 Score=224.86 Aligned_cols=152 Identities=27% Similarity=0.347 Sum_probs=122.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCC------
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNED------ 258 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~------ 258 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35788899999999999999985 4788999984 346999999999999999999997665
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78888853 4788899999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
..... ......||+.|+||
T Consensus 177 ~~~~~---~~~~~~gt~~y~aP 195 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAP 195 (371)
T ss_dssp ----------------CTTCCH
T ss_pred ccccc---ccCCceecCCccCH
Confidence 64321 23346799999998
No 213
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94 E-value=1.7e-27 Score=241.26 Aligned_cols=150 Identities=29% Similarity=0.447 Sum_probs=123.8
Q ss_pred CeeccCCCccEEEEEcc---CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEEccCC
Q 040294 206 NLIGRGSFGSVYKARLQ---DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLEYMTN 269 (360)
Q Consensus 206 ~~iG~G~~g~Vy~~~~~---~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e~~~~ 269 (360)
+.||+|+||.||+|.+. +++.||||. +.+|++++++++|||||+++++|..+ ..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccCC
Confidence 47999999999999653 467899973 45799999999999999999999755 47899999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCc-eee
Q 040294 270 GSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQS-MTQ 348 (360)
Q Consensus 270 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~-~~~ 348 (360)
|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...... ...
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999754 46889999999999999999999 889999999999999999999999999999987544321 222
Q ss_pred ecccccCcccCC
Q 040294 349 TQTLATIGYMAP 360 (360)
Q Consensus 349 ~~~~gt~~Y~aP 360 (360)
....||+.|+||
T Consensus 530 ~~~~~t~~y~AP 541 (635)
T 4fl3_A 530 THGKWPVKWYAP 541 (635)
T ss_dssp -----CGGGSCH
T ss_pred cCCCCceeeeCh
Confidence 344578899998
No 214
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.94 E-value=2.4e-27 Score=227.80 Aligned_cols=155 Identities=24% Similarity=0.429 Sum_probs=116.7
Q ss_pred CCC-CCeeccCCCccEEEEEcc---CCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEe--cCCCeEEEEEEc
Q 040294 202 FSA-NNLIGRGSFGSVYKARLQ---DGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSC--SNEDFRALVLEY 266 (360)
Q Consensus 202 f~~-~~~iG~G~~g~Vy~~~~~---~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~--~~~~~~~lv~e~ 266 (360)
|+. .++||+|+||.||+|+++ +++.||||. +.+|++++++++|||||+++++| ..+...++||||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~ 101 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY 101 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEEC
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeC
Confidence 444 468999999999999965 578899984 45799999999999999999999 457789999999
Q ss_pred cCCCCHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee----cCCCcEEEeecc
Q 040294 267 MTNGSLEKVLYSS--------NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL----DDNIVAHLSDFG 334 (360)
Q Consensus 267 ~~~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DFG 334 (360)
++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||
T Consensus 102 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 102 AE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp CS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred CC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 97 4888877521 124889999999999999999999 8899999999999999 678999999999
Q ss_pred cccccCCCCCc-eeeecccccCcccCC
Q 040294 335 IAKLLTGEDQS-MTQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~~-~~~~~~~gt~~Y~aP 360 (360)
+|+........ ......+||++|+||
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aP 204 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAP 204 (405)
T ss_dssp CCC----------------CCCTTCCH
T ss_pred CceecCCCCcccccCCCceecCcccCc
Confidence 99876543211 223456799999998
No 215
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.94 E-value=2.1e-27 Score=217.29 Aligned_cols=157 Identities=26% Similarity=0.399 Sum_probs=126.9
Q ss_pred CCCCCCCeeccCCCccEEEEEcc--CCc--EEEehhh--------------HHHHHHhhcCCCCCeeEEEEEecCCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ--DGM--EFAIKSF--------------DVECEVMKSIHHRNLVKIISSCSNEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~--~~~--~vavK~~--------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 261 (360)
++|+..+.||+|+||.||+|++. +++ .||||.+ .+|++++++++||||+++++++..++ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46888899999999999999853 333 5888743 46899999999999999999998876 78
Q ss_pred EEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCC
Q 040294 262 LVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999876566889999999999999999999 88999999999999999999999999999988754
Q ss_pred CCCce-eeecccccCcccCC
Q 040294 342 EDQSM-TQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~-~~~~~~gt~~Y~aP 360 (360)
..... ......+|+.|+||
T Consensus 174 ~~~~~~~~~~~~~~~~y~aP 193 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAP 193 (291)
T ss_dssp -CCEEEC-----CCGGGCCH
T ss_pred cccchhhhccCCCCceeeCc
Confidence 43221 22345688899998
No 216
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.94 E-value=4.1e-28 Score=228.74 Aligned_cols=157 Identities=18% Similarity=0.288 Sum_probs=132.1
Q ss_pred CCCCCCCeeccCCCccEEEEEccC---------CcEEEehh------hHHHHHHhhcCCCCCeeE---------------
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQD---------GMEFAIKS------FDVECEVMKSIHHRNLVK--------------- 249 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~---------~~~vavK~------~~~E~~~l~~l~hpniv~--------------- 249 (360)
++|...+.||+|+||.||+|+... ++.||||. +.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 578888999999999999999753 78899984 578999999999999987
Q ss_pred EEEEecC-CCeEEEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCC-
Q 040294 250 IISSCSN-EDFRALVLEYMTNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNI- 326 (360)
Q Consensus 250 l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~- 326 (360)
+++++.. ++..++||||+ +++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~ 197 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQ 197 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCC
Confidence 5667665 67899999999 99999999865 356899999999999999999999 88999999999999999988
Q ss_pred -cEEEeecccccccCCCCCc-----eeeecccccCcccCC
Q 040294 327 -VAHLSDFGIAKLLTGEDQS-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 327 -~~ki~DFGla~~~~~~~~~-----~~~~~~~gt~~Y~aP 360 (360)
.+||+|||+++.+...... .......||+.|+||
T Consensus 198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 237 (352)
T 2jii_A 198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM 237 (352)
T ss_dssp EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCH
T ss_pred ceEEEecCcceeeccCCCccccccccccccccCCccccCH
Confidence 9999999999876532211 112345799999998
No 217
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.94 E-value=7.5e-27 Score=229.10 Aligned_cols=158 Identities=25% Similarity=0.374 Sum_probs=136.2
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh---------hHHHHHHhhcCCC-CCeeEEEEEecCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS---------FDVECEVMKSIHH-RNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~---------~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +..|+++++.++| ++++.+..++...+..++||||+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 46789999999999999999995 5789999983 5789999999987 56667777778888999999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee---cCCCcEEEeecccccccCCCCC
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL---DDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DFGla~~~~~~~~ 344 (360)
+++|.+++......+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 99999999876667999999999999999999999 8899999999999999 6889999999999998764432
Q ss_pred c-----eeeecccccCcccCC
Q 040294 345 S-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~-----~~~~~~~gt~~Y~aP 360 (360)
. .......||+.|+||
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aP 182 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASV 182 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCH
T ss_pred ccccccccccccCCCccccCH
Confidence 1 112356799999998
No 218
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.94 E-value=4.8e-27 Score=219.26 Aligned_cols=156 Identities=24% Similarity=0.383 Sum_probs=130.5
Q ss_pred hCCCCCC-CeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCC-CCCeeEEEEEecCCCeEEE
Q 040294 199 TNGFSAN-NLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIH-HRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 199 ~~~f~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~l 262 (360)
.+.|... +.||+|+||.||+|+.. +++.||+|. +.+|+.++++++ ||||+++++++...+..++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 3445555 78999999999999865 789999984 456899999885 6999999999999999999
Q ss_pred EEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC---CCcEEEeecccccc
Q 040294 263 VLEYMTNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---NIVAHLSDFGIAKL 338 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DFGla~~ 338 (360)
||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.
T Consensus 107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~ 183 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183 (327)
T ss_dssp EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence 99999999999998643 346899999999999999999999 889999999999999987 78999999999997
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
..... ......||+.|+||
T Consensus 184 ~~~~~---~~~~~~gt~~y~aP 202 (327)
T 3lm5_A 184 IGHAC---ELREIMGTPEYLAP 202 (327)
T ss_dssp C------------CCCGGGCCH
T ss_pred cCCcc---ccccccCCcCccCC
Confidence 65332 22346799999998
No 219
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.94 E-value=2.7e-27 Score=224.26 Aligned_cols=156 Identities=26% Similarity=0.380 Sum_probs=133.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecCC-----CeE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSNE-----DFR 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 260 (360)
.++|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457888999999999999999854 788899984 34799999999999999999998755 368
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 5999998754 4889999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCce-eeecccccCcccCC
Q 040294 341 GEDQSM-TQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~-~~~~~~gt~~Y~aP 360 (360)
...... .....+||+.|+||
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aP 200 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAP 200 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCH
T ss_pred CCCCccccccccccccCCCCC
Confidence 332111 12345799999998
No 220
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=230.45 Aligned_cols=157 Identities=27% Similarity=0.480 Sum_probs=127.2
Q ss_pred CCCCCCCeeccCCCccEEEEEccCCcEEEehhh--------HHHHHHhhcC-CCCCeeEEEEEecCCCeEEEEEEccCCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF--------DVECEVMKSI-HHRNLVKIISSCSNEDFRALVLEYMTNG 270 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~--------~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g 270 (360)
.+|+..++||+|+||.||.....+++.||||.+ .+|+++++++ +|||||++++++.+.+..++|||||. |
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 457788999999999976555567899999853 6799999999 79999999999999999999999996 5
Q ss_pred CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC-----CCcEEEeecccccccCCCCCc
Q 040294 271 SLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD-----NIVAHLSDFGIAKLLTGEDQS 345 (360)
Q Consensus 271 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~-----~~~~ki~DFGla~~~~~~~~~ 345 (360)
+|.+++........+..+..++.|++.||+||| +.+|+||||||+|||++. ...+||+|||+|+.+......
T Consensus 103 ~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 103 TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 999999876655555566789999999999999 889999999999999943 346889999999987543211
Q ss_pred -eeeecccccCcccCC
Q 040294 346 -MTQTQTLATIGYMAP 360 (360)
Q Consensus 346 -~~~~~~~gt~~Y~aP 360 (360)
......+||++|+||
T Consensus 180 ~~~~~~~~gt~~y~AP 195 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAP 195 (432)
T ss_dssp ------CCSCTTSCCG
T ss_pred eeeccccCCCcCccCh
Confidence 223456799999998
No 221
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.94 E-value=4.5e-27 Score=221.19 Aligned_cols=156 Identities=27% Similarity=0.445 Sum_probs=131.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh------------HHHHHHhhcCCCCCeeEEEEEecCC-----CeE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF------------DVECEVMKSIHHRNLVKIISSCSNE-----DFR 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~------------~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 260 (360)
.++|+..+.||+|+||.||+|+.. +|+.||||.+ .+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467888999999999999999965 7889999853 4799999999999999999998764 678
Q ss_pred EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccC
Q 040294 261 ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLT 340 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~ 340 (360)
++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999998763 5889999999999999999999 8899999999999999999999999999998765
Q ss_pred CCCCce--------eeecccccCcccCC
Q 040294 341 GEDQSM--------TQTQTLATIGYMAP 360 (360)
Q Consensus 341 ~~~~~~--------~~~~~~gt~~Y~aP 360 (360)
...... .....+||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 191 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAP 191 (353)
T ss_dssp ----------------CCCCCCGGGCCH
T ss_pred cccccccCccccccchhhccccccccCC
Confidence 322110 11235789999998
No 222
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.94 E-value=5.6e-27 Score=214.95 Aligned_cols=158 Identities=27% Similarity=0.436 Sum_probs=134.6
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEe-cCCCeEEEEEEcc
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSC-SNEDFRALVLEYM 267 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~e~~ 267 (360)
.++|+..+.||+|+||.||+|+. .+++.||||. +..|+++++.++|++++..+.++ ..++..++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 46788999999999999999995 5889999983 57899999999988866555554 6677889999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee---cCCCcEEEeecccccccCCCCC
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL---DDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DFGla~~~~~~~~ 344 (360)
+++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.......
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 99999999866667999999999999999999999 8899999999999999 4889999999999988654432
Q ss_pred c-----eeeecccccCcccCC
Q 040294 345 S-----MTQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~-----~~~~~~~gt~~Y~aP 360 (360)
. .......||+.|+||
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCH
T ss_pred ccccccccccccccccccCCh
Confidence 1 112346799999998
No 223
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.94 E-value=1.4e-27 Score=217.31 Aligned_cols=153 Identities=32% Similarity=0.488 Sum_probs=125.4
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh---------hHHHHHHhhcCCCCCeeEEEEEecCC-CeEEEEEEccC
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS---------FDVECEVMKSIHHRNLVKIISSCSNE-DFRALVLEYMT 268 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~---------~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~lv~e~~~ 268 (360)
.++|+..+.||+|+||.||+|+.. ++.||||. +.+|++++++++||||+++++++... +..++||||++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 356888899999999999999874 78899984 56799999999999999999997654 47899999999
Q ss_pred CCCHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCCcee
Q 040294 269 NGSLEKVLYSSNC-ILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMT 347 (360)
Q Consensus 269 ~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~ 347 (360)
+|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 171 (278)
T 1byg_A 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---- 171 (278)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc----
Confidence 9999999975432 3788889999999999999999 8899999999999999999999999999998654321
Q ss_pred eecccccCcccCC
Q 040294 348 QTQTLATIGYMAP 360 (360)
Q Consensus 348 ~~~~~gt~~Y~aP 360 (360)
....+|+.|+||
T Consensus 172 -~~~~~~~~y~aP 183 (278)
T 1byg_A 172 -DTGKLPVKWTAP 183 (278)
T ss_dssp -----CCTTTSCH
T ss_pred -cCCCccccccCH
Confidence 233578899998
No 224
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=5.7e-27 Score=218.54 Aligned_cols=157 Identities=28% Similarity=0.362 Sum_probs=121.6
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh-----------hHHHHHHhhcCC-CCCeeEEEEEe--------cCCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS-----------FDVECEVMKSIH-HRNLVKIISSC--------SNED 258 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~-----------~~~E~~~l~~l~-hpniv~l~~~~--------~~~~ 258 (360)
.+|+..+.||+|+||.||+|+. .+++.||||. +.+|+.+++++. ||||+++++++ ....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4678889999999999999996 4789999984 356889999996 99999999998 3445
Q ss_pred eEEEEEEccCCCCHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCC--eEEccCCCCceeecCCCcEEEeecc
Q 040294 259 FRALVLEYMTNGSLEKVLYS--SNCILDILQRLNIMINVTSALEYLHFGFSTP--IIHCDLKPHNVLLDDNIVAHLSDFG 334 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DFG 334 (360)
..++||||+. |+|.+++.. ....+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 6899999996 799998864 3456899999999999999999999 777 9999999999999999999999999
Q ss_pred cccccCCCCCce----------eeecccccCcccCC
Q 040294 335 IAKLLTGEDQSM----------TQTQTLATIGYMAP 360 (360)
Q Consensus 335 la~~~~~~~~~~----------~~~~~~gt~~Y~aP 360 (360)
+++......... ......||+.|+||
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTP 219 (337)
T ss_dssp TCBCCSSCC---------------------------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCCh
Confidence 998765432110 11245699999998
No 225
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.94 E-value=1.8e-27 Score=226.09 Aligned_cols=150 Identities=12% Similarity=0.110 Sum_probs=112.4
Q ss_pred CCCCCCeeccCCCccEEEEEcc-CCcEEEehhh--------------HHH---HHHhhcCCCCCeeEEEE-------Eec
Q 040294 201 GFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF--------------DVE---CEVMKSIHHRNLVKIIS-------SCS 255 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~--------------~~E---~~~l~~l~hpniv~l~~-------~~~ 255 (360)
.|...+.||+|+||.||+|+.. +++.||||.+ ..| ++.++. +||||++++. ++.
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 4778899999999999999964 7899999843 356 445556 7999988653 332
Q ss_pred CC-----------------CeEEEEEEccCCCCHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHhhhcCCCCeEE
Q 040294 256 NE-----------------DFRALVLEYMTNGSLEKVLYSSNCILDILQR------LNIMINVTSALEYLHFGFSTPIIH 312 (360)
Q Consensus 256 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~yLH~~~~~~iiH 312 (360)
.+ ...++||||++ |+|.+++...+..+++..+ ..++.|++.||+||| +.+|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 22 34799999999 8999999865434455556 778899999999999 899999
Q ss_pred ccCCCCceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 313 CDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 313 rdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|||||+|||++.++.+||+|||+|+.... ......||+.|+||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aP 260 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPR 260 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCH
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcCh
Confidence 99999999999999999999999997532 12245678999998
No 226
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.94 E-value=5.8e-27 Score=214.81 Aligned_cols=156 Identities=27% Similarity=0.433 Sum_probs=129.9
Q ss_pred CCCCCCC-eeccCCCccEEEEEc---cCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANN-LIGRGSFGSVYKARL---QDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~-~iG~G~~g~Vy~~~~---~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 262 (360)
++|...+ .||+|+||.||+|.+ .+++.||||. +.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4566666 899999999999964 3467899874 45689999999999999999999 4566899
Q ss_pred EEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCC
Q 040294 263 VLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~ 342 (360)
||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 99999999999999764 35889999999999999999999 889999999999999999999999999999887544
Q ss_pred CCce-eeecccccCcccCC
Q 040294 343 DQSM-TQTQTLATIGYMAP 360 (360)
Q Consensus 343 ~~~~-~~~~~~gt~~Y~aP 360 (360)
.... ......+|+.|+||
T Consensus 171 ~~~~~~~~~~~~~~~y~aP 189 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAP 189 (291)
T ss_dssp CSEEEC----CCCGGGCCH
T ss_pred CCcccccccCCCCceeeCh
Confidence 3221 12234577899998
No 227
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.94 E-value=9.4e-27 Score=219.61 Aligned_cols=163 Identities=25% Similarity=0.399 Sum_probs=123.4
Q ss_pred HHHHHHhCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh----------HHHHHHhhcCCCCCeeEEEEEecCCC---
Q 040294 193 LELLRATNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF----------DVECEVMKSIHHRNLVKIISSCSNED--- 258 (360)
Q Consensus 193 ~~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~----------~~E~~~l~~l~hpniv~l~~~~~~~~--- 258 (360)
.+.....++|+..+.||+|+||.||+|+.. +++.||||.+ ..|++.++.++||||++++++|...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 345567789999999999999999999964 7899999843 45677788899999999999986533
Q ss_pred ----eEEEEEEccCCCCHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC-CCcEEE
Q 040294 259 ----FRALVLEYMTNGSLEKVLY---SSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD-NIVAHL 330 (360)
Q Consensus 259 ----~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~-~~~~ki 330 (360)
..++||||+++ +|.+.+. .....+++..+..++.|++.||.||| .++.+|+||||||+|||++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 37899999986 5544443 23456888899999999999999999 34689999999999999996 899999
Q ss_pred eecccccccCCCCCceeeecccccCcccCC
Q 040294 331 SDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 331 ~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+|||+++.+.... ......||+.|+||
T Consensus 174 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aP 200 (360)
T 3e3p_A 174 CDFGSAKKLSPSE---PNVAYICSRYYRAP 200 (360)
T ss_dssp CCCTTCBCCCTTS---CCCSTTSCGGGCCH
T ss_pred eeCCCceecCCCC---CcccccCCcceeCH
Confidence 9999999765433 22345789999998
No 228
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.94 E-value=1.6e-27 Score=226.21 Aligned_cols=151 Identities=27% Similarity=0.430 Sum_probs=114.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCC------C
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNE------D 258 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~------~ 258 (360)
.++|+..+.||+|+||.||+|+. .+|+.||||.+ .+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46788899999999999999985 57899999853 3699999999999999999998754 5
Q ss_pred eEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 259 FRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 259 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 7899988865 35889999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ....+||++|+||
T Consensus 182 ~~~~-----~~~~~~t~~y~aP 198 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAP 198 (367)
T ss_dssp --------------CCCTTCCH
T ss_pred cccc-----CCCcCcCcCccCh
Confidence 5432 2346799999998
No 229
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.94 E-value=7.7e-27 Score=226.10 Aligned_cols=152 Identities=23% Similarity=0.364 Sum_probs=130.8
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh----------HHHHHHhhcC------CCCCeeEEEEEecCCCeEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF----------DVECEVMKSI------HHRNLVKIISSCSNEDFRAL 262 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~----------~~E~~~l~~l------~hpniv~l~~~~~~~~~~~l 262 (360)
.+|+..+.||+|+||.||+|+.. +++.||||.+ ..|+++++.+ .|+||+++++++...+..++
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 46888899999999999999854 6889999854 4577777765 67899999999999999999
Q ss_pred EEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc--EEEeeccccccc
Q 040294 263 VLEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV--AHLSDFGIAKLL 339 (360)
Q Consensus 263 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~--~ki~DFGla~~~ 339 (360)
||||+. ++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++..
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 999996 69999887654 35899999999999999999999 889999999999999999887 999999999865
Q ss_pred CCCCCceeeecccccCcccCC
Q 040294 340 TGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~~~~~~~~gt~~Y~aP 360 (360)
... ....+||+.||||
T Consensus 253 ~~~-----~~~~~gt~~y~aP 268 (429)
T 3kvw_A 253 HQR-----VYTYIQSRFYRAP 268 (429)
T ss_dssp TCC-----CCSSCSCGGGCCH
T ss_pred CCc-----ccccCCCCCccCh
Confidence 432 2345799999998
No 230
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.94 E-value=6.4e-27 Score=217.61 Aligned_cols=156 Identities=29% Similarity=0.472 Sum_probs=132.8
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc--cCCcEEEehh-------------hHHHHHHhhcC---CCCCeeEEEEEec----
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL--QDGMEFAIKS-------------FDVECEVMKSI---HHRNLVKIISSCS---- 255 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~--~~~~~vavK~-------------~~~E~~~l~~l---~hpniv~l~~~~~---- 255 (360)
..++|+..+.||+|+||.||+|+. .+++.||+|. +.+|+++++.+ +||||++++++|.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999996 4678899984 34677777665 8999999999987
Q ss_pred -CCCeEEEEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeec
Q 040294 256 -NEDFRALVLEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDF 333 (360)
Q Consensus 256 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DF 333 (360)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999998 69999987643 34889999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCCCceeeecccccCcccCC
Q 040294 334 GIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 334 Gla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|+++...... ......||+.|+||
T Consensus 165 g~~~~~~~~~---~~~~~~~~~~y~aP 188 (326)
T 1blx_A 165 GLARIYSFQM---ALTSVVVTLWYRAP 188 (326)
T ss_dssp CSCCCCCGGG---GGCCCCCCCTTCCH
T ss_pred cccccccCCC---CccccccccceeCH
Confidence 9998754221 22345789999998
No 231
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.94 E-value=2e-27 Score=220.32 Aligned_cols=156 Identities=26% Similarity=0.431 Sum_probs=129.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~e 265 (360)
.++|+..+.||+|+||.||+|+..+ .+|+|. +.+|++++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4678889999999999999998754 477763 4579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC-
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ- 344 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~- 344 (360)
|+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||+++.......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999876667889999999999999999999 88999999999999998 67999999999876532111
Q ss_pred --ceeeecccccCcccCC
Q 040294 345 --SMTQTQTLATIGYMAP 360 (360)
Q Consensus 345 --~~~~~~~~gt~~Y~aP 360 (360)
........||+.|+||
T Consensus 186 ~~~~~~~~~~g~~~y~aP 203 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAP 203 (319)
T ss_dssp --CCSCBCCSGGGGTSCH
T ss_pred ccccccccCCCcccccCh
Confidence 1122334689999998
No 232
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.94 E-value=1.3e-26 Score=214.66 Aligned_cols=155 Identities=26% Similarity=0.400 Sum_probs=123.8
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-----------hHHHHHHhhcCCCCCeeEEEEEec------------
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-----------FDVECEVMKSIHHRNLVKIISSCS------------ 255 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-----------~~~E~~~l~~l~hpniv~l~~~~~------------ 255 (360)
++|...+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888899999999999999975 588999984 457999999999999999999874
Q ss_pred --CCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec-CCCcEEEee
Q 040294 256 --NEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD-DNIVAHLSD 332 (360)
Q Consensus 256 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~D 332 (360)
..+..++||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 4467899999998 699999864 35788899999999999999999 88999999999999997 567999999
Q ss_pred cccccccCCCCC-ceeeecccccCcccCC
Q 040294 333 FGIAKLLTGEDQ-SMTQTQTLATIGYMAP 360 (360)
Q Consensus 333 FGla~~~~~~~~-~~~~~~~~gt~~Y~aP 360 (360)
||+++....... ........||..|+||
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aP 193 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSP 193 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCH
T ss_pred CccccccCCCcccccccccccccccccCc
Confidence 999987653221 1122345689999998
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.94 E-value=5.5e-27 Score=217.21 Aligned_cols=156 Identities=25% Similarity=0.393 Sum_probs=128.8
Q ss_pred hCCCCCCCeeccCCCccEEEEEccCCcEEEehh-------------hHHHHHHhhcCC--CCCeeEEEEEecCCCeEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-------------FDVECEVMKSIH--HRNLVKIISSCSNEDFRALV 263 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lv 263 (360)
.++|+..+.||+|+||.||+++..+++.||||. +.+|++++++++ ||||+++++++..++..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 456888899999999999999988899999984 356899999997 59999999999999999999
Q ss_pred EEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 264 LEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 264 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
|| +.+++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||++++ +.+||+|||+++.+....
T Consensus 107 ~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~ 180 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT 180 (313)
T ss_dssp EC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred Ee-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence 99 5688999999765 36788899999999999999999 889999999999999974 899999999998765443
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
.........||+.|+||
T Consensus 181 ~~~~~~~~~gt~~y~aP 197 (313)
T 3cek_A 181 TSVVKDSQVGTVNYMPP 197 (313)
T ss_dssp ---------CCGGGCCH
T ss_pred ccccccCCCCCCCcCCH
Confidence 22223355799999998
No 234
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.94 E-value=8.3e-27 Score=218.60 Aligned_cols=155 Identities=26% Similarity=0.392 Sum_probs=117.6
Q ss_pred hCCCCCC-CeeccCCCccEEEEEcc-CCcEEEehhh------HHHH-HHhhcCCCCCeeEEEEEecC----CCeEEEEEE
Q 040294 199 TNGFSAN-NLIGRGSFGSVYKARLQ-DGMEFAIKSF------DVEC-EVMKSIHHRNLVKIISSCSN----EDFRALVLE 265 (360)
Q Consensus 199 ~~~f~~~-~~iG~G~~g~Vy~~~~~-~~~~vavK~~------~~E~-~~l~~l~hpniv~l~~~~~~----~~~~~lv~e 265 (360)
.++|... ++||+|+||.||+|+.. +++.||||.+ ..|+ ..++.++||||+++++++.. +...++|||
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 4567774 57999999999999965 7899999964 2333 34667899999999999876 456899999
Q ss_pred ccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC---CCcEEEeecccccccCC
Q 040294 266 YMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---NIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DFGla~~~~~ 341 (360)
|+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999999998654 36899999999999999999999 889999999999999976 45699999999987643
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. .....||+.|+||
T Consensus 184 ~~----~~~~~~t~~y~aP 198 (336)
T 3fhr_A 184 NA----LQTPCYTPYYVAP 198 (336)
T ss_dssp -------------------
T ss_pred cc----cccCCCCcCccCh
Confidence 22 2345789999998
No 235
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.94 E-value=5.2e-27 Score=223.89 Aligned_cols=152 Identities=26% Similarity=0.349 Sum_probs=128.3
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh----------HHHHHHhhcCC--------CCCeeEEEEEec----C
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF----------DVECEVMKSIH--------HRNLVKIISSCS----N 256 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~----------~~E~~~l~~l~--------hpniv~l~~~~~----~ 256 (360)
++|+..+.||+|+||.||+|+. .+++.||||.+ .+|+++++.++ ||||+++++++. .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence 5688899999999999999985 57889999853 46888988885 788999999987 5
Q ss_pred CCeEEEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCceeecCCC--------
Q 040294 257 EDFRALVLEYMTNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFST-PIIHCDLKPHNVLLDDNI-------- 326 (360)
Q Consensus 257 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~-~iiHrdlk~~NiLl~~~~-------- 326 (360)
....++||||+ ++++.+.+... ...+++..+..++.|++.||+||| +. +|+||||||+|||++.++
T Consensus 117 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 117 GTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp EEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence 66899999999 55666665543 356899999999999999999999 77 999999999999999775
Q ss_pred -----------------------------------------cEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 327 -----------------------------------------VAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 327 -----------------------------------------~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.+||+|||+++..... ....+||+.|+||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aP 262 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSL 262 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCH
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCC
Confidence 7999999999876432 2345799999998
No 236
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.94 E-value=5.7e-27 Score=222.70 Aligned_cols=150 Identities=26% Similarity=0.435 Sum_probs=127.1
Q ss_pred hCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCCCeE----
Q 040294 199 TNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNEDFR---- 260 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~~~~---- 260 (360)
.++|...+.||+|+||.||+|+. .+|+.||||.+ .+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 45788889999999999999985 47899999843 4699999999999999999999887654
Q ss_pred --EEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 261 --ALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 261 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
++||||++ ++|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 688888743 4889999999999999999999 88999999999999999999999999999986
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... .....||+.|+||
T Consensus 194 ~~~~-----~~~~~~t~~y~aP 210 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAP 210 (371)
T ss_dssp -----------CTTCCCTTSCH
T ss_pred cccC-----cCCcccCccccCH
Confidence 5432 2346789999998
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.93 E-value=9.5e-27 Score=225.78 Aligned_cols=155 Identities=27% Similarity=0.414 Sum_probs=120.1
Q ss_pred CCCCCeeccCCCccEEEEEccCCcEEEehh--------hHHHHHHhhcC-CCCCeeEEEEEecCCCeEEEEEEccCCCCH
Q 040294 202 FSANNLIGRGSFGSVYKARLQDGMEFAIKS--------FDVECEVMKSI-HHRNLVKIISSCSNEDFRALVLEYMTNGSL 272 (360)
Q Consensus 202 f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~--------~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~e~~~~g~L 272 (360)
|...++||+|+||+||.+...+|+.||||. +.+|+++++++ +|||||++++++.+++..++|||||. |+|
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 445688999999999877666899999984 35799999876 89999999999999999999999996 699
Q ss_pred HHHHhcCCCCC------CHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC-------------CcEEEeec
Q 040294 273 EKVLYSSNCIL------DILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN-------------IVAHLSDF 333 (360)
Q Consensus 273 ~~~l~~~~~~~------~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~-------------~~~ki~DF 333 (360)
.+++....... ++..+..++.|++.||+||| +.+|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997643211 22235679999999999999 8899999999999999754 48999999
Q ss_pred ccccccCCCCCce--eeecccccCcccCC
Q 040294 334 GIAKLLTGEDQSM--TQTQTLATIGYMAP 360 (360)
Q Consensus 334 Gla~~~~~~~~~~--~~~~~~gt~~Y~aP 360 (360)
|+++.+....... ......||++|+||
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aP 201 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201 (434)
T ss_dssp TTCEECCC--------------CCTTSCH
T ss_pred ccceecCCCCccceeeecCCCCCCCccCH
Confidence 9999876433211 12345799999998
No 238
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.93 E-value=1.7e-26 Score=215.38 Aligned_cols=152 Identities=22% Similarity=0.360 Sum_probs=131.0
Q ss_pred CCCCCCCeeccCCCccEEEEEc--cCCcEEEehhh----------HHHHHHhhcCCCC------CeeEEEEEecCCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL--QDGMEFAIKSF----------DVECEVMKSIHHR------NLVKIISSCSNEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~--~~~~~vavK~~----------~~E~~~l~~l~hp------niv~l~~~~~~~~~~~ 261 (360)
++|+..+.||+|+||.||+|.. .+++.||||.+ ..|+++++.++|+ +++++++++...+..+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 5788899999999999999985 36889999843 4688888887665 4999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC----------------
Q 040294 262 LVLEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---------------- 324 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---------------- 324 (360)
+||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 999999 889999997654 35788999999999999999999 889999999999999987
Q ss_pred ---CCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 325 ---NIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 325 ---~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
++.+||+|||+++..... .....||+.|+||
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP 203 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAP 203 (339)
T ss_dssp EESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCH
T ss_pred cccCCCceEeeCcccccCccc-----cccccCCccccCh
Confidence 668999999999875432 2345799999998
No 239
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.93 E-value=1.8e-26 Score=211.11 Aligned_cols=155 Identities=27% Similarity=0.464 Sum_probs=134.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehh-------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS-------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~-------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+.. +++.||+|. +.+|++++++++||||+++++++...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 457889999999999999999965 788999984 357999999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCC---CcEEEeecccccccCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDN---IVAHLSDFGIAKLLTG 341 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DFGla~~~~~ 341 (360)
||+++++|.+.+.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||+++....
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999999886543 5889999999999999999999 8899999999999999754 4799999999987654
Q ss_pred CCCceeeecccccCcccCC
Q 040294 342 EDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 342 ~~~~~~~~~~~gt~~Y~aP 360 (360)
.. ......||+.|+||
T Consensus 177 ~~---~~~~~~~~~~y~aP 192 (287)
T 2wei_A 177 NT---KMKDRIGTAYYIAP 192 (287)
T ss_dssp CS---SCSCHHHHHTTCCH
T ss_pred CC---ccccccCcccccCh
Confidence 32 12234689999998
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.93 E-value=1.5e-26 Score=215.24 Aligned_cols=155 Identities=25% Similarity=0.354 Sum_probs=135.4
Q ss_pred HhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-----------------HHHHHHhhcCC--CCCeeEEEEEecCC
Q 040294 198 ATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-----------------DVECEVMKSIH--HRNLVKIISSCSNE 257 (360)
Q Consensus 198 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-----------------~~E~~~l~~l~--hpniv~l~~~~~~~ 257 (360)
..++|+..+.||+|+||.||+|+. .+++.||||.+ ..|++++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 346788899999999999999985 57889999853 35899999996 59999999999999
Q ss_pred CeEEEEEEccCC-CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec-CCCcEEEeeccc
Q 040294 258 DFRALVLEYMTN-GSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD-DNIVAHLSDFGI 335 (360)
Q Consensus 258 ~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DFGl 335 (360)
+..++||||+.+ ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.+||+|||+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999999986 8999998764 35888999999999999999999 89999999999999999 789999999999
Q ss_pred ccccCCCCCceeeecccccCcccCC
Q 040294 336 AKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 336 a~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
++...... .....||+.|+||
T Consensus 197 ~~~~~~~~----~~~~~gt~~y~aP 217 (320)
T 3a99_A 197 GALLKDTV----YTDFDGTRVYSPP 217 (320)
T ss_dssp CEECCSSC----BCCCCSCGGGSCH
T ss_pred cccccccc----ccCCCCCccCCCh
Confidence 98765332 2345699999998
No 241
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.93 E-value=2.3e-26 Score=214.30 Aligned_cols=155 Identities=29% Similarity=0.383 Sum_probs=118.3
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh------------HHHHH-HhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF------------DVECE-VMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~------------~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+.. +++.||||.+ ..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 357888899999999999999974 7899999843 23444 677889999999999999999999999
Q ss_pred EccCCCCHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 265 EYMTNGSLEKVLYS----SNCILDILQRLNIMINVTSALEYLHFGFST-PIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 265 e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~-~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
||+++ +|.+++.. ....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 88777652 2456889999999999999999999 77 9999999999999999999999999999876
Q ss_pred CCCCCceeeecccccCcccCC
Q 040294 340 TGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 340 ~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... ......||+.|+||
T Consensus 177 ~~~~---~~~~~~gt~~y~aP 194 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAP 194 (327)
T ss_dssp ---------------------
T ss_pred cccc---ccccCCCCccccCc
Confidence 5332 22334799999998
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.93 E-value=9.3e-27 Score=215.44 Aligned_cols=156 Identities=26% Similarity=0.373 Sum_probs=129.3
Q ss_pred HHhCCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh-----------------HHHHHHhhcC----CCCCeeEEEEEe
Q 040294 197 RATNGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF-----------------DVECEVMKSI----HHRNLVKIISSC 254 (360)
Q Consensus 197 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~-----------------~~E~~~l~~l----~hpniv~l~~~~ 254 (360)
...++|+..+.||+|+||.||+|+. .+++.||||.+ ..|++++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3456899999999999999999986 47889999854 2488888888 899999999999
Q ss_pred cCCCeEEEEEEc-cCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec-CCCcEEEee
Q 040294 255 SNEDFRALVLEY-MTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD-DNIVAHLSD 332 (360)
Q Consensus 255 ~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~D 332 (360)
...+..++|||| +.+++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+|
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEE
Confidence 999999999999 78999999997643 5889999999999999999999 88999999999999999 889999999
Q ss_pred cccccccCCCCCceeeecccccCcccCC
Q 040294 333 FGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 333 FGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
||+++...... .....||+.|+||
T Consensus 184 fg~~~~~~~~~----~~~~~~~~~y~aP 207 (312)
T 2iwi_A 184 FGSGALLHDEP----YTDFDGTRVYSPP 207 (312)
T ss_dssp CSSCEECCSSC----BCCCCSCTTTSCH
T ss_pred cchhhhcccCc----ccccCCcccccCc
Confidence 99998765432 2345699999998
No 243
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.93 E-value=1.1e-26 Score=219.00 Aligned_cols=150 Identities=26% Similarity=0.433 Sum_probs=126.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCCCe-----
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNEDF----- 259 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~~~----- 259 (360)
.++|...+.||+|+||.||+|+.. +|+.||||.+ .+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 356888899999999999999864 7899999843 468999999999999999999987654
Q ss_pred -EEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 260 -RALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 260 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
.++||||++ ++|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887743 4889999999999999999999 88999999999999999999999999999986
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... .....||+.|+||
T Consensus 176 ~~~~-----~~~~~~t~~y~aP 192 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAP 192 (353)
T ss_dssp -------------CCSBCCSCH
T ss_pred CCCC-----ccccccCcCcCCH
Confidence 5422 2345789999998
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.93 E-value=2.2e-26 Score=213.13 Aligned_cols=155 Identities=26% Similarity=0.372 Sum_probs=117.5
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh-------------HHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF-------------DVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~-------------~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
.++|+..+.||+|+||.||+|+.. +++.||||.+ ..+..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356778899999999999999975 7899999854 12344678889999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCceeecCCCcEEEeecccccccCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFST-PIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGED 343 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~-~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~ 343 (360)
||+ ++.+..+.......+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 56676666554566899999999999999999999 74 89999999999999999999999999998764332
Q ss_pred CceeeecccccCcccCC
Q 040294 344 QSMTQTQTLATIGYMAP 360 (360)
Q Consensus 344 ~~~~~~~~~gt~~Y~aP 360 (360)
......||+.|+||
T Consensus 180 ---~~~~~~~~~~y~aP 193 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAP 193 (318)
T ss_dssp ----------CCTTCCH
T ss_pred ---cccccCCCccccCh
Confidence 22345699999998
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.93 E-value=2.8e-26 Score=231.06 Aligned_cols=155 Identities=32% Similarity=0.509 Sum_probs=132.4
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehh------------hHHHHHHhhcCCCCCeeEEEEEecC------CCeE
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKS------------FDVECEVMKSIHHRNLVKIISSCSN------EDFR 260 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~------------~~~E~~~l~~l~hpniv~l~~~~~~------~~~~ 260 (360)
++|+..+.||+|+||.||+|+. .+|+.||||. +..|++++++++||||+++++++.. ++..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999986 4789999984 4569999999999999999999876 6678
Q ss_pred EEEEEccCCCCHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCc---EEEeeccc
Q 040294 261 ALVLEYMTNGSLEKVLYSSN--CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIV---AHLSDFGI 335 (360)
Q Consensus 261 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DFGl 335 (360)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999998643 25788889999999999999999 889999999999999997664 99999999
Q ss_pred ccccCCCCCceeeecccccCcccCC
Q 040294 336 AKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 336 a~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
++...... ......||+.|+||
T Consensus 171 a~~~~~~~---~~~~~~gt~~Y~AP 192 (676)
T 3qa8_A 171 AKELDQGE---LCTEFVGTLQYLAP 192 (676)
T ss_dssp CCBTTSCC---CCCCCCSCCTTCSS
T ss_pred cccccccc---ccccccCCcccCCh
Confidence 99865432 22346799999998
No 246
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.93 E-value=8.7e-26 Score=215.28 Aligned_cols=155 Identities=28% Similarity=0.399 Sum_probs=130.7
Q ss_pred hCCCCCCCeeccCCCccEEEEEcc-CCcEEEehhh----------HHHHHHhhcCC-CC-----CeeEEEEEecCCCeEE
Q 040294 199 TNGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKSF----------DVECEVMKSIH-HR-----NLVKIISSCSNEDFRA 261 (360)
Q Consensus 199 ~~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~~----------~~E~~~l~~l~-hp-----niv~l~~~~~~~~~~~ 261 (360)
.++|+..+.||+|+||.||+|+.. +++.||||.+ ..|+++++.++ |+ +|+++++++...+..+
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 568889999999999999999864 7889999854 35777777775 44 4999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeec--CCCcEEEeecccccc
Q 040294 262 LVLEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLD--DNIVAHLSDFGIAKL 338 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~--~~~~~ki~DFGla~~ 338 (360)
+||||++ |+|.+++.... ..+++..+..++.|++.||+|||. +..+|+||||||+|||++ .++.+||+|||+++.
T Consensus 133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 9999996 59999997654 458899999999999999999992 247899999999999994 578899999999987
Q ss_pred cCCCCCceeeecccccCcccCC
Q 040294 339 LTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 339 ~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
.... .....||+.|+||
T Consensus 211 ~~~~-----~~~~~~t~~y~aP 227 (382)
T 2vx3_A 211 LGQR-----IYQYIQSRFYRSP 227 (382)
T ss_dssp TTCC-----CCSSCSCGGGCCH
T ss_pred cccc-----cccccCCccccCh
Confidence 6432 2346799999998
No 247
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.93 E-value=8.2e-26 Score=212.17 Aligned_cols=152 Identities=24% Similarity=0.384 Sum_probs=129.1
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CC-cEEEehhh----------HHHHHHhhcCCCCC------eeEEEEEecCCCeEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DG-MEFAIKSF----------DVECEVMKSIHHRN------LVKIISSCSNEDFRA 261 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~-~~vavK~~----------~~E~~~l~~l~hpn------iv~l~~~~~~~~~~~ 261 (360)
++|+..+.||+|+||.||+|+.. ++ +.||+|.+ ..|++++++++|++ ++.+++++...+..+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 57888999999999999999864 44 68999853 46888888887766 999999999999999
Q ss_pred EEEEccCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceee------------------
Q 040294 262 LVLEYMTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLL------------------ 322 (360)
Q Consensus 262 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl------------------ 322 (360)
+||||+ ++++.+.+.... ..+++..+..++.|++.||+||| +.+|+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 999999 567777665543 46899999999999999999999 8999999999999999
Q ss_pred -cCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 323 -DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 323 -~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.++.+||+|||+++..... .....||+.|+||
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP 208 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPP 208 (355)
T ss_dssp EESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCH
T ss_pred ccCCCcEEEeecCcccccccc-----ccCCcCCCcccCC
Confidence 56789999999999875432 2345799999998
No 248
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=8e-27 Score=232.00 Aligned_cols=142 Identities=18% Similarity=0.281 Sum_probs=111.6
Q ss_pred CCCeeccCCCccEEEEEccCCcEEEehh-------------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 204 ANNLIGRGSFGSVYKARLQDGMEFAIKS-------------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 204 ~~~~iG~G~~g~Vy~~~~~~~~~vavK~-------------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
..++||+|+||.||+|+. .++.+|+|. +.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 457899999999999965 456777752 568999999999999995555555666779999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeecccccccCCCCC
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQ 344 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~ 344 (360)
||+++++|.+++.. +..++.|+++||+||| +.+|+||||||+|||++. .+||+|||+|+.......
T Consensus 419 E~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999865 4578999999999999 899999999999999998 999999999998754321
Q ss_pred ce-----eeecccccCcccCC
Q 040294 345 SM-----TQTQTLATIGYMAP 360 (360)
Q Consensus 345 ~~-----~~~~~~gt~~Y~aP 360 (360)
.. .....+||+.||||
T Consensus 485 ~~~~~~~~~~~~~GT~~y~AP 505 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFD 505 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHH
T ss_pred cccchhhhhhhhcCCCCcCCH
Confidence 11 12356899999998
No 249
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.92 E-value=5.3e-26 Score=215.36 Aligned_cols=152 Identities=22% Similarity=0.395 Sum_probs=129.5
Q ss_pred CCCCCCCeeccCCCccEEEEEc-cCCcEEEehhh----------HHHHHHhhcCC-----------CCCeeEEEEEecCC
Q 040294 200 NGFSANNLIGRGSFGSVYKARL-QDGMEFAIKSF----------DVECEVMKSIH-----------HRNLVKIISSCSNE 257 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~-~~~~~vavK~~----------~~E~~~l~~l~-----------hpniv~l~~~~~~~ 257 (360)
++|...+.||+|+||.||+|+. .+++.||||.+ ..|++++++++ ||||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 5688899999999999999995 57899999853 46888888776 89999999998765
Q ss_pred C----eEEEEEEccCCCCHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCC-CeEEccCCCCceeec------CC
Q 040294 258 D----FRALVLEYMTNGSLEKVLYSS-NCILDILQRLNIMINVTSALEYLHFGFST-PIIHCDLKPHNVLLD------DN 325 (360)
Q Consensus 258 ~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~yLH~~~~~-~iiHrdlk~~NiLl~------~~ 325 (360)
+ ..++||||+ +++|.+++... ...+++..+..++.|++.||+||| +. +|+||||||+|||++ ..
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCc
Confidence 4 789999999 89999999764 345889999999999999999999 77 999999999999994 44
Q ss_pred CcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 326 IVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 326 ~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
+.+||+|||+++..... .....||+.|+||
T Consensus 175 ~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aP 204 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEH-----YTNSIQTREYRSP 204 (373)
T ss_dssp EEEEECCCTTCEETTBC-----CCSCCSCGGGCCH
T ss_pred ceEEEcccccccccCCC-----CCCCCCCccccCc
Confidence 58999999999876432 2345799999998
No 250
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.92 E-value=3.1e-25 Score=203.32 Aligned_cols=132 Identities=13% Similarity=0.064 Sum_probs=118.4
Q ss_pred CCCCCCCeeccCCCccEEEEEcc-CCcEEEehh--------------hHHHHHHhhcCCCCCeeEEEEEecCCCeEEEEE
Q 040294 200 NGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKS--------------FDVECEVMKSIHHRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 200 ~~f~~~~~iG~G~~g~Vy~~~~~-~~~~vavK~--------------~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 264 (360)
+.|+..+.||+|+||.||+|+.. +++.||||. +.+|++++++++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999965 589999984 456889999999999999999999999999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccc
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAK 337 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~ 337 (360)
||++|++|.+++... ....+...++.|++.||+||| +.+|+||||||+|||++.++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999999542 345577889999999999999 8999999999999999999999999887654
No 251
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.92 E-value=3.4e-25 Score=204.00 Aligned_cols=140 Identities=29% Similarity=0.450 Sum_probs=122.6
Q ss_pred CCCCCC-CeeccCCCccEEEEEc-cCCcEEEehh------hHHHHHHh-hcCCCCCeeEEEEEecC----CCeEEEEEEc
Q 040294 200 NGFSAN-NLIGRGSFGSVYKARL-QDGMEFAIKS------FDVECEVM-KSIHHRNLVKIISSCSN----EDFRALVLEY 266 (360)
Q Consensus 200 ~~f~~~-~~iG~G~~g~Vy~~~~-~~~~~vavK~------~~~E~~~l-~~l~hpniv~l~~~~~~----~~~~~lv~e~ 266 (360)
++|... ++||+|+||.||+|+. .+++.||+|. +.+|++++ +..+||||+++++++.. +...++||||
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 96 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC 96 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEee
Confidence 456655 7899999999999986 5789999985 45688887 66799999999999876 6688999999
Q ss_pred cCCCCHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC---CCcEEEeecccccccCCC
Q 040294 267 MTNGSLEKVLYSSN-CILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD---NIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 267 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DFGla~~~~~~ 342 (360)
+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++...+.
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 173 (299)
T 3m2w_A 97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173 (299)
T ss_dssp CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTC
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccccc
Confidence 99999999998653 36899999999999999999999 899999999999999997 789999999999876543
No 252
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.90 E-value=2.5e-24 Score=207.44 Aligned_cols=150 Identities=19% Similarity=0.247 Sum_probs=113.9
Q ss_pred CCCCCCeeccCCCccEEEEE-ccCCcEEEehhh--------------HHHHHHhhcCCC-CCe-----------------
Q 040294 201 GFSANNLIGRGSFGSVYKAR-LQDGMEFAIKSF--------------DVECEVMKSIHH-RNL----------------- 247 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~-~~~~~~vavK~~--------------~~E~~~l~~l~h-pni----------------- 247 (360)
.|...++||+|+||.||+|+ ..+|+.||||.+ .+|+.+++.++| +|.
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 46667899999999999999 457999999854 479999999987 211
Q ss_pred ----eEEEEEecCC-----CeEEEEEEccCCCCHHHHHh------cCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEE
Q 040294 248 ----VKIISSCSNE-----DFRALVLEYMTNGSLEKVLY------SSNCILDILQRLNIMINVTSALEYLHFGFSTPIIH 312 (360)
Q Consensus 248 ----v~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiH 312 (360)
..+..++... ...+++|+++ +++|.+++. .....+++..++.++.|+++||+||| +.+|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 1111112211 2356777765 689999884 22334778889999999999999999 899999
Q ss_pred ccCCCCceeecCCCcEEEeecccccccCCCCCceeeecccccCcccCC
Q 040294 313 CDLKPHNVLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLATIGYMAP 360 (360)
Q Consensus 313 rdlk~~NiLl~~~~~~ki~DFGla~~~~~~~~~~~~~~~~gt~~Y~aP 360 (360)
|||||+|||++.++.+||+|||+++.... .....+| +.||||
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aP 276 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPP 276 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCc
Confidence 99999999999999999999999986532 1345678 999998
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=4.9e-23 Score=188.35 Aligned_cols=132 Identities=17% Similarity=0.182 Sum_probs=108.0
Q ss_pred HHHHHhCCCCCCCeeccCCCccEEEEEccCCcEEEehhh-----------------------------HHHHHHhhcCCC
Q 040294 194 ELLRATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF-----------------------------DVECEVMKSIHH 244 (360)
Q Consensus 194 ~~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~-----------------------------~~E~~~l~~l~h 244 (360)
.+......|+..+.||+|+||.||+|+..+|+.||||.+ .+|++++++++|
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 344455567777999999999999999977999999854 479999999985
Q ss_pred CCeeEEEEEecCCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecC
Q 040294 245 RNLVKIISSCSNEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDD 324 (360)
Q Consensus 245 pniv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~ 324 (360)
+++.. ++.. +..++||||++||+|.+ +.. .....++.|++.||+||| +.+|+||||||+|||++
T Consensus 164 ~~v~~---~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 164 LAVPK---VYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp SSSCC---EEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-
T ss_pred CCcCe---EEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-
Confidence 44444 4433 45699999999999988 422 123469999999999999 89999999999999999
Q ss_pred CCcEEEeecccccccCC
Q 040294 325 NIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 325 ~~~~ki~DFGla~~~~~ 341 (360)
++.+||+|||+|+....
T Consensus 228 ~~~vkl~DFG~a~~~~~ 244 (282)
T 1zar_A 228 EEGIWIIDFPQSVEVGE 244 (282)
T ss_dssp TTEEEECCCTTCEETTS
T ss_pred CCcEEEEECCCCeECCC
Confidence 99999999999986543
No 254
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.85 E-value=1.1e-21 Score=203.15 Aligned_cols=149 Identities=39% Similarity=0.611 Sum_probs=127.9
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------------------------------------
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------------------------------------- 42 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------------------------------------- 42 (360)
+++|+.|+|++|+++|.+|..+.++++|+.|++++|.+++.
T Consensus 513 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 46677777777777777777777788888888887766520
Q ss_pred ----------------------------------------ccCeEEcCCCcccccCCccccCCCccceecccccccccCC
Q 040294 43 ----------------------------------------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSI 82 (360)
Q Consensus 43 ----------------------------------------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~ 82 (360)
.|+.|++++|+++|.+|.+|+++++|+.|+|++|+++|.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 2567999999999999999999999999999999999999
Q ss_pred CccccCCCCCCeEeCcCCccCcccchhhhccc-----------cccccCCCCCCCCcccccccCCCCCCCCCCCCCCCCC
Q 040294 83 PNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL-----------LEGEIPRGGPFTKFSSKSFIGNDLLCGSPNLQVPPCK 151 (360)
Q Consensus 83 p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~-----------~~~~~p~~~~~~~~~~~~~~~n~~~cgsp~~~~~~c~ 151 (360)
|.+|+++++|+.|||++|+|+|.+|..+..+. ++|.||..+.|..++..+|.||+.+||.|. ++|.
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~ 749 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCD 749 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCC
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCC
Confidence 99999999999999999999999998876653 789999999999999999999999999773 3676
Q ss_pred CC
Q 040294 152 SN 153 (360)
Q Consensus 152 ~~ 153 (360)
..
T Consensus 750 ~~ 751 (768)
T 3rgz_A 750 PS 751 (768)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 255
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=1.2e-20 Score=170.13 Aligned_cols=128 Identities=20% Similarity=0.244 Sum_probs=101.4
Q ss_pred CCCCCeeccCCCccEEEEEc-cCCcE--EEehh-----------------------------------hHHHHHHhhcCC
Q 040294 202 FSANNLIGRGSFGSVYKARL-QDGME--FAIKS-----------------------------------FDVECEVMKSIH 243 (360)
Q Consensus 202 f~~~~~iG~G~~g~Vy~~~~-~~~~~--vavK~-----------------------------------~~~E~~~l~~l~ 243 (360)
|+..+.||+|+||.||+|+. .+|+. ||||. +.+|++++.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56678999999999999997 68888 99983 356888999888
Q ss_pred CCCe--eEEEEEecCCCeEEEEEEccCC-C----CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCC
Q 040294 244 HRNL--VKIISSCSNEDFRALVLEYMTN-G----SLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLK 316 (360)
Q Consensus 244 hpni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk 316 (360)
|+++ +.++++ +..+|||||+.+ | +|.+.... .++.....++.|++.||.|||. +.+|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 7754 344443 246899999942 4 77776532 1233567799999999999994 4689999999
Q ss_pred CCceeecCCCcEEEeecccccccCC
Q 040294 317 PHNVLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 317 ~~NiLl~~~~~~ki~DFGla~~~~~ 341 (360)
|+|||+++ .++|+|||+|.....
T Consensus 199 p~NILl~~--~~~liDFG~a~~~~~ 221 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTLRH 221 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEETTS
T ss_pred HHHEEEcC--cEEEEECcccccCCC
Confidence 99999998 999999999987643
No 256
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.76 E-value=1.5e-18 Score=160.81 Aligned_cols=142 Identities=33% Similarity=0.548 Sum_probs=100.3
Q ss_pred CCCCcEeeCCCCcccccCCccccCCc-ccCeeeccccccCC--------cccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLT-ALRNLHLDSNELRH--------LVLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~~--------~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|+|.+|..+.+++ +|+.|++++|.+++ +.|+.|++++|++++.+|..|+.+++|+.|+
T Consensus 148 l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 227 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227 (313)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEE
T ss_pred CCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEE
Confidence 34455555555555555555555554 55555555555442 1366777777777777777777888888888
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccc-----------cccccCCCCCCCCcccccccCCCCCCC
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL-----------LEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~-----------~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
|++|++++.+|. +..+++|++|+|++|++++.+|..+..+. +.|.+|..+.+..+....+.+|+.+|+
T Consensus 228 L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 228 LAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred CCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccC
Confidence 888888766555 77888888888999998888887665542 678888877777888889999999999
Q ss_pred CCC
Q 040294 142 SPN 144 (360)
Q Consensus 142 sp~ 144 (360)
.|.
T Consensus 307 ~p~ 309 (313)
T 1ogq_A 307 SPL 309 (313)
T ss_dssp TTS
T ss_pred CCC
Confidence 764
No 257
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.69 E-value=1.2e-17 Score=157.70 Aligned_cols=130 Identities=15% Similarity=0.192 Sum_probs=95.9
Q ss_pred HHHHhCCCCCCCeeccCCCccEEEEEccCCcEEEehhh---------------------------------HHHHHHhhc
Q 040294 195 LLRATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKSF---------------------------------DVECEVMKS 241 (360)
Q Consensus 195 ~~~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~~---------------------------------~~E~~~l~~ 241 (360)
+.....-|++.+.||+|+||.||+|...+|+.||||.+ .+|...|.+
T Consensus 90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r 169 (397)
T 4gyi_A 90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA 169 (397)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 33334458889999999999999999989999999842 124445555
Q ss_pred CCCCCee--EEEEEecCCCeEEEEEEccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCc
Q 040294 242 IHHRNLV--KIISSCSNEDFRALVLEYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHN 319 (360)
Q Consensus 242 l~hpniv--~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~N 319 (360)
+.+.++. ..++.. ..+|||||++|++|.++... + ....++.|++.+|.||| ..+||||||||.|
T Consensus 170 L~~~gv~vp~p~~~~----~~~LVME~i~G~~L~~l~~~-----~--~~~~l~~qll~~l~~lH---~~gIVHrDLKp~N 235 (397)
T 4gyi_A 170 LYEEGFPVPEPIAQS----RHTIVMSLVDALPMRQVSSV-----P--DPASLYADLIALILRLA---KHGLIHGDFNEFN 235 (397)
T ss_dssp HHHTTCSCCCEEEEE----TTEEEEECCSCEEGGGCCCC-----S--CHHHHHHHHHHHHHHHH---HTTEECSCCSTTS
T ss_pred HHhcCCCCCeeeecc----CceEEEEecCCccHhhhccc-----H--HHHHHHHHHHHHHHHHH---HCCCcCCCCCHHH
Confidence 5443331 222221 23799999999888765422 1 23457899999999999 8899999999999
Q ss_pred eeecCCC----------cEEEeecccccc
Q 040294 320 VLLDDNI----------VAHLSDFGIAKL 338 (360)
Q Consensus 320 iLl~~~~----------~~ki~DFGla~~ 338 (360)
||+++++ .+.|+||+-+-.
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred EEEeCCCCcccccccccceEEEEeCCccc
Confidence 9998776 389999997654
No 258
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.68 E-value=2.3e-16 Score=141.27 Aligned_cols=110 Identities=32% Similarity=0.371 Sum_probs=85.6
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..|..|.++++|+.|+|++|.++++ .|+.|++++|++++..+..|..+++|+.|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 4577888888888877777788888888888888887763 4778888888888777777788888888888
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
++|+|++..+..|..+++|+.|+|++|+|++..|..+..
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 153 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDK 153 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCc
Confidence 888888666666788888888888888888777655443
No 259
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.68 E-value=2.1e-16 Score=139.76 Aligned_cols=126 Identities=28% Similarity=0.377 Sum_probs=109.4
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+.+ .|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 5799999999999998899999999999999999999764 5899999999999888888899999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+ ..+....+.+|+..|.
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------------~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL------------SSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC------------TTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC------------CCCCEEEeeCCCccCC
Confidence 999999 889999999999999999999998776555433 3445566777876664
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.68 E-value=1.5e-16 Score=139.72 Aligned_cols=127 Identities=25% Similarity=0.374 Sum_probs=108.0
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..+..|..+++|+.|+|++|+++.+ .|+.|+|++|+|+...+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 4689999999999987777899999999999999998764 5899999999999776667899999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
++|++++..|..|..+++|+.|+|++|+|++..+..+..+ ..+....+.+|+..|.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------------~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPL------------RAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC------------TTCCEEECCSSCEECS
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCC------------CCCCEEEeCCCCcCCC
Confidence 9999998889999999999999999999998877655443 3444566777877664
No 261
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.67 E-value=1.7e-16 Score=139.40 Aligned_cols=127 Identities=24% Similarity=0.361 Sum_probs=105.7
Q ss_pred CCCcEeeCCCCcccccCC-ccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 3 AALFQLDLRGNKLSGSIP-TCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
..++.|+|++|+|++..| ..|.++++|+.|+|++|+++++ .|+.|+|++|++++..|..|..+++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 357899999999998755 4588999999999999998764 588999999999988888899999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+ ..+....+.+|+..|.
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------------~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTL------------HSLSTLNLLANPFNCN 168 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTC------------TTCCEEECCSCCEECS
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCC------------CCCCEEEecCcCCcCC
Confidence 99999998889999999999999999999999888766543 2344456667766554
No 262
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.66 E-value=1.4e-16 Score=164.81 Aligned_cols=48 Identities=33% Similarity=0.497 Sum_probs=29.9
Q ss_pred CccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 66 KSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 66 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
++|+.|+|++|+++|.+|.+|+++++|+.|+|++|+|+|.+|..+..+
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L 679 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCC
Confidence 455566666666666666666666666666666666666666555443
No 263
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.65 E-value=8.8e-18 Score=165.04 Aligned_cols=30 Identities=13% Similarity=0.174 Sum_probs=25.9
Q ss_pred ehhhHHHHHHhhcCCCCCeeEEEEEecCCC
Q 040294 229 IKSFDVECEVMKSIHHRNLVKIISSCSNED 258 (360)
Q Consensus 229 vK~~~~E~~~l~~l~hpniv~l~~~~~~~~ 258 (360)
-+.|..|++.+.+++|+|+|+++|||....
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 367999999999999999999999998754
No 264
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.65 E-value=4e-16 Score=137.09 Aligned_cols=107 Identities=26% Similarity=0.356 Sum_probs=100.6
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|.++++ .|+.|+|++|++++..|..|..+++|+.|+
T Consensus 56 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 135 (220)
T 2v70_A 56 LPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLS 135 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEE
T ss_pred CCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEE
Confidence 67899999999999988888999999999999999999874 589999999999999999999999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccch
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
|++|+|++..|..|..+++|+.|+|++|++++..+.
T Consensus 136 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 136 LYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp CTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGG
T ss_pred CCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCch
Confidence 999999988899999999999999999999987763
No 265
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.65 E-value=1.1e-15 Score=138.61 Aligned_cols=138 Identities=31% Similarity=0.366 Sum_probs=95.5
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|++++ + +.+.++++|+.|++++|.++++ .|+.|++++|++++..|..|+.+++|+.|+
T Consensus 62 l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 5678888888888875 3 3677888888888888877653 477788888888877777778888888888
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccc-----------cccccCCC-CCCCCcccccccCCCCCC
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL-----------LEGEIPRG-GPFTKFSSKSFIGNDLLC 140 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~-----------~~~~~p~~-~~~~~~~~~~~~~n~~~c 140 (360)
|++|++++..|..|..+++|+.|+|++|++++..|..+..+. +.+..|.. ..+..+....+.+|+..|
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 888888866666677888888888888888877665443321 22222221 233455556667776655
Q ss_pred C
Q 040294 141 G 141 (360)
Q Consensus 141 g 141 (360)
.
T Consensus 220 ~ 220 (272)
T 3rfs_A 220 T 220 (272)
T ss_dssp C
T ss_pred c
Confidence 4
No 266
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=1.1e-15 Score=131.43 Aligned_cols=105 Identities=28% Similarity=0.355 Sum_probs=90.5
Q ss_pred CCcEeeCCCCcccccCCc-cccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 4 ALFQLDLRGNKLSGSIPT-CFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~-~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
+|+.|+|++|+|++..+. .|.++++|+.|+|++|+|+++ .|+.|+|++|+|++..|..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 688899999999866654 488899999999999988875 4888999999999888888889999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccch
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
++|+|++.+|..|..+++|++|+|++|+|++..+.
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 99999988888899999999999999999888763
No 267
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.63 E-value=2.1e-15 Score=130.92 Aligned_cols=110 Identities=32% Similarity=0.367 Sum_probs=93.5
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..+..|.++++|+.|++++|+++.+ .|+.|++++|++++..+..|+.+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 5689999999999976666788999999999999988764 5889999999999777777889999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
++|++++..+..|..+++|+.|+|++|++++..+..+..
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 146 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDR 146 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhcc
Confidence 999999776777899999999999999999876654443
No 268
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.62 E-value=3.6e-16 Score=144.72 Aligned_cols=113 Identities=33% Similarity=0.523 Sum_probs=101.9
Q ss_pred CCCCcEeeCCC-CcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRG-NKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++ |++++.+|..|+++++|++|+|++|.+++. .|+.|++++|++++.+|..++.+++|++|
T Consensus 75 l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (313)
T 1ogq_A 75 LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154 (313)
T ss_dssp CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEE
T ss_pred CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeE
Confidence 67899999995 999999999999999999999999998742 58999999999999999999999999999
Q ss_pred cccccccccCCCccccCCC-CCCeEeCcCCccCcccchhhhccc
Q 040294 72 SLGHNRLQGSIPNSFDDLV-SLESLDLSNNNLSEIIPLSLEKLL 114 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~-~L~~l~ls~N~l~~~~p~~l~~l~ 114 (360)
+|++|+++|.+|..+..++ +|++|+|++|++++.+|..+..+.
T Consensus 155 ~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~ 198 (313)
T 1ogq_A 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN 198 (313)
T ss_dssp ECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC
T ss_pred ECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc
Confidence 9999999999999999998 999999999999999888776653
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.62 E-value=7.3e-16 Score=143.65 Aligned_cols=109 Identities=23% Similarity=0.297 Sum_probs=58.9
Q ss_pred CCCCcEeeCCCCcccccCCccccC---------CcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccC
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSN---------LTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQG 64 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~---------l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~ 64 (360)
+++|+.|+|++|++.+.+|..+.. +++|+.|+|++|.++.+ .|+.|++++|++++ +|..++.
T Consensus 149 l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~ 227 (328)
T 4fcg_A 149 LNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHH 227 (328)
T ss_dssp CTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG
T ss_pred CcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-Cchhhcc
Confidence 345555555555555555554433 55555555555555432 35555555555553 3444555
Q ss_pred CCccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhh
Q 040294 65 LKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 65 l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~ 111 (360)
+++|+.|+|++|++.+.+|..|+.+++|+.|+|++|++.+.+|..+.
T Consensus 228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~ 274 (328)
T 4fcg_A 228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH 274 (328)
T ss_dssp CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGG
T ss_pred CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhh
Confidence 55555555555555555555555555555555555555555554433
No 270
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.61 E-value=3e-15 Score=129.93 Aligned_cols=121 Identities=31% Similarity=0.307 Sum_probs=104.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|++..+..|.++++|+.|+|++|.++.+ .|+.|++++|++++..+..|..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 67899999999999976666789999999999999999864 589999999999988887899999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccch----hhhccccccccCCC
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPL----SLEKLLLEGEIPRG 122 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~----~l~~l~~~~~~p~~ 122 (360)
|++|++++..+..|..+++|+.|+|++|++.+..|. .+....+.|.+|..
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l~~L~~~~n~~~g~ip~~ 184 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNS 184 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTTHHHHHHHHHCTTTBBCT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecCCCCHHHHHHHHHhCCceeecc
Confidence 999999977777799999999999999999998873 12223477888863
No 271
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.61 E-value=1.7e-15 Score=133.11 Aligned_cols=106 Identities=26% Similarity=0.335 Sum_probs=98.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|.|+.+ .|+.|+|++|++++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 67899999999999998899999999999999999999864 589999999999999999999999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
|++|+|++..+..|..+++|+.|+|++|++.....
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 99999998877889999999999999999987544
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.61 E-value=6.8e-15 Score=133.09 Aligned_cols=106 Identities=33% Similarity=0.351 Sum_probs=69.7
Q ss_pred CCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 4 ALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+|+.|+|++|+|++..+..|.++++|+.|++++|.++.+ .|+.|++++|++++..+..|..+++|+.|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 467777777777755555677777777777777766543 36666777777666555556666667777777
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccchh
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLS 109 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 109 (360)
+|++++..|..|..+++|++|+|++|++++..+..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 152 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGV 152 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhH
Confidence 67666555556666666666666666666655443
No 273
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.60 E-value=3.2e-15 Score=128.39 Aligned_cols=120 Identities=30% Similarity=0.472 Sum_probs=102.6
Q ss_pred cEeeCCCCcccccCCccccCCcccCeeeccccccCCc----------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 6 FQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL----------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 6 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~----------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
+.+++++|+|+ .+|..+.. +|+.|++++|.++++ .|+.|+|++|++++.+|..|+++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 68999999997 78877754 899999999998764 488999999999999999999999999999999
Q ss_pred cccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCC
Q 040294 76 NRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLC 140 (360)
Q Consensus 76 N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~c 140 (360)
|+|++..|..|..+++|++|+|++|+|++.+|..+..+ ..+....+.+|+..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------------~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHL------------NSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTC------------TTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcC------------CCCCEEEeCCCCccC
Confidence 99999888889999999999999999999988766543 233444556666554
No 274
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.60 E-value=3.7e-15 Score=135.03 Aligned_cols=111 Identities=32% Similarity=0.370 Sum_probs=83.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|++..|..|.++++|+.|++++|.++++ .|+.|++++|++++..|..++.+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 56788888888888876666678888888888888877653 477778888888776666677788888888
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
|++|++++..|..|..+++|+.|+|++|++++..|..+..
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 203 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDR 203 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhC
Confidence 8888887666666777788888888888887777654443
No 275
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.60 E-value=8.1e-15 Score=131.10 Aligned_cols=128 Identities=30% Similarity=0.418 Sum_probs=104.6
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|.++.+ .|+.|++++|++++..+..|..+++|+.|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 67899999999999988788889999999999999988764 588899999999977777788999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
|++|+|++..|..|..+++|+.|+|++|+|++..|..+..+ ..+....+.+|+..|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------------~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRL------------GKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC------------TTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCC------------CCCCEEEeeCCceeCC
Confidence 99999997666689999999999999999998777655443 3444556667766554
No 276
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.60 E-value=3.1e-15 Score=136.26 Aligned_cols=112 Identities=34% Similarity=0.415 Sum_probs=88.3
Q ss_pred CCCCcEeeCCCCc-ccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNK-LSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|. ++...|..|.++++|+.|++++|.++++ .|+.|++++|++++..+..|+.+++|+.|
T Consensus 79 l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 158 (285)
T 1ozn_A 79 LALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHL 158 (285)
T ss_dssp CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEE
Confidence 5778888888887 7766577788888888888888887753 47888888888887776778888888888
Q ss_pred cccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
+|++|++++..+..|..+++|+.|+|++|++++..|..+..+
T Consensus 159 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 200 (285)
T 1ozn_A 159 FLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDL 200 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred ECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCc
Confidence 888888886555668888888888888888888777665543
No 277
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1.3e-15 Score=125.09 Aligned_cols=106 Identities=20% Similarity=0.275 Sum_probs=97.2
Q ss_pred CCCCcEeeCCCCccc-ccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLS-GSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|.++.+ .|+.|++++|++++.+|..++.+++|+.|+|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCCTTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCchhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 467999999999999 88999999999999999999999874 5899999999999989998899999999999
Q ss_pred cccccccC-CCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQGS-IPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g~-~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|++++. .|..+..+++|++|++++|++++..+
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 99999963 45889999999999999999998776
No 278
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=4.2e-15 Score=125.72 Aligned_cols=105 Identities=30% Similarity=0.344 Sum_probs=88.9
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..+..|.++++|+.|++++|.++.+ .|+.|++++|++++..+..+..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 5788999999999876666788899999999999988764 4788999999998877777888999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|++++..+..|..+++|++|+|++|++++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 9999986655667889999999999999988776
No 279
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.58 E-value=1.3e-14 Score=132.74 Aligned_cols=107 Identities=32% Similarity=0.332 Sum_probs=77.8
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
++|+.|+|++|+|++..|..|.++++|+.|+|++|.++.+ .|+.|++++|+++ .+|..+..+++|+.|+|++
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~ 109 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF 109 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCS
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCCCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCC
Confidence 4678888888888877777788888888888888877653 4677777777776 5566667777777777777
Q ss_pred cccccCCCccccCCCCCCeEeCcCCccCcccchhh
Q 040294 76 NRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSL 110 (360)
Q Consensus 76 N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l 110 (360)
|+|++..|..|..+++|++|+|++|+|++..+..+
T Consensus 110 N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 144 (290)
T 1p9a_G 110 NRLTSLPLGALRGLGELQELYLKGNELKTLPPGLL 144 (290)
T ss_dssp SCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred CcCcccCHHHHcCCCCCCEEECCCCCCCccChhhc
Confidence 77776555667777777777777777776655443
No 280
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=7.9e-15 Score=126.12 Aligned_cols=121 Identities=26% Similarity=0.347 Sum_probs=76.4
Q ss_pred cEeeCCCCcccccCCccccCCcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccCCCccceecccccc
Q 040294 6 FQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNR 77 (360)
Q Consensus 6 ~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 77 (360)
+.+++++|+|+ .+|..+. ++|+.|+|++|.++.+ .|+.|+|++|+|++..|..|.++++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 45667777766 4555443 4667777777766653 36667777777776666667777777777777777
Q ss_pred cccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 78 LQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 78 l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
|++..|..|..+++|+.|+|++|+|++..+..+..+ ..+....+.+|+..|.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l------------~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDL------------SALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTC------------TTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcC------------ccccEEEeCCCCeecC
Confidence 776666667777777777777777776555443322 2333445556665554
No 281
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.57 E-value=3.9e-15 Score=140.48 Aligned_cols=106 Identities=30% Similarity=0.281 Sum_probs=75.7
Q ss_pred CCcEeeCCCCcccccCCcccc-CCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 4 ALFQLDLRGNKLSGSIPTCFS-NLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
.++.|+|++|+|++..+..|. ++++|+.|+|++|+|+.+ .|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 466777777777766666666 777777777777777653 4677777777777666666777777777777
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchh
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLS 109 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 109 (360)
++|+|++..|..|..+++|+.|+|++|+|++..+..
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 155 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVEL 155 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGG
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHH
Confidence 777777666777777777777777777777654443
No 282
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.56 E-value=1.2e-14 Score=128.44 Aligned_cols=106 Identities=31% Similarity=0.336 Sum_probs=96.4
Q ss_pred CCCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 1 YLAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 1 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
.+++|+.|+|++|+|+...+..|.++++|+.|+|++|+|+.+ .|+.|++++|+|+ .+|..+..+++|+.|
T Consensus 62 ~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 140 (229)
T 3e6j_A 62 SLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHL 140 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEE
T ss_pred CccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEE
Confidence 367899999999999866667789999999999999999874 5899999999999 789999999999999
Q ss_pred cccccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 141 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 141 ALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred ECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999999997767789999999999999999998765
No 283
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.56 E-value=9.6e-15 Score=141.53 Aligned_cols=129 Identities=26% Similarity=0.341 Sum_probs=110.3
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|++++.+|..|.++++|+.|++++|+++++ .|+.|++++|++++..|..|+++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 5799999999999999999999999999999999998764 5899999999999988999999999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCCCC
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCGSP 143 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cgsp 143 (360)
++|++++..|.+|..+++|++|+|++|++++..+..+..+ ..+....+.+|+..|..+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l------------~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRL------------TSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC------------TTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccC------------CcccEEEccCCCcccCCC
Confidence 9999998889999999999999999999998766554432 344556667777666543
No 284
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.56 E-value=7.2e-15 Score=123.12 Aligned_cols=106 Identities=26% Similarity=0.329 Sum_probs=96.3
Q ss_pred CCCCcEeeCCCCccc-ccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLS-GSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
.++|+.|+|++|+++ +.+|..+..+++|+.|++++|.++.+ .|+.|++++|++++.+|..+..+++|+.|+|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCCSSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCChhhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 467999999999998 78999999999999999999998864 5899999999999988988889999999999
Q ss_pred cccccccC-CCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQGS-IPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g~-~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|++++. .+..+..+++|+.|+|++|++++..+
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 99999963 22789999999999999999998766
No 285
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.55 E-value=2.1e-14 Score=123.48 Aligned_cols=104 Identities=32% Similarity=0.378 Sum_probs=95.5
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.|+.+ .|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 47999999999998 7889999999999999999999875 5899999999999999999999999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|+|++..+..|..+++|+.|+|++|++.....
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9999997666679999999999999999987554
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.55 E-value=2.9e-14 Score=129.72 Aligned_cols=109 Identities=32% Similarity=0.376 Sum_probs=74.3
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCc-ccccCCccccCCCccceec
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNN-LLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~-l~~~~p~~~~~l~~L~~L~ 72 (360)
++|+.|+|++|++++..+..|.++++|+.|++++|.++++ .|+.|++++|+ +....|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 4567777777777765556677777777777777766543 36677777776 5555566677777777777
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhh
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~ 111 (360)
|++|++++..|..|..+++|++|+|++|++++..+..+.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 150 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR 150 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc
Confidence 777777766666677777777777777777766554443
No 287
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.55 E-value=1e-14 Score=135.83 Aligned_cols=109 Identities=23% Similarity=0.334 Sum_probs=96.7
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC------------------cccCeEEcCCCcccccCCcccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH------------------LVLTRTDFSRNNLLGDIPTTIQ 63 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~------------------~~L~~l~l~~N~l~~~~p~~~~ 63 (360)
+++|+.|+|++|+|+ .+|..|+++++|+.|++++|.+.+ ..|+.|++++|+++ .+|..++
T Consensus 126 l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~ 203 (328)
T 4fcg_A 126 FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIA 203 (328)
T ss_dssp GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGG
T ss_pred cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhc
Confidence 678999999999999 789999999999999999976543 15889999999998 8899999
Q ss_pred CCCccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 64 GLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 64 ~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
.+++|+.|+|++|++++ +|..|..+++|++|+|++|++.+.+|..+..+
T Consensus 204 ~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l 252 (328)
T 4fcg_A 204 NLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGR 252 (328)
T ss_dssp GCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCC
T ss_pred CCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCC
Confidence 99999999999999995 77789999999999999999999999766543
No 288
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.54 E-value=1.2e-14 Score=146.08 Aligned_cols=108 Identities=22% Similarity=0.231 Sum_probs=75.1
Q ss_pred CCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 4 ALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++.|||++|+|++..|..|.++++|++|+|++|+|+++ .|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 567777777777766666777777777777777777653 46777777777776666667777777777777
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcc-cchhhh
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEI-IPLSLE 111 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~-~p~~l~ 111 (360)
+|++++..|..|+++++|++|+|++|.+++. +|..+.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~ 170 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS 170 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhc
Confidence 7777765555677777777777777777653 444433
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.54 E-value=2e-14 Score=132.10 Aligned_cols=110 Identities=25% Similarity=0.390 Sum_probs=86.5
Q ss_pred CCCCcEeeCCCCcccccCC-ccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccc-cCCccccCCCccce
Q 040294 2 LAALFQLDLRGNKLSGSIP-TCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLG-DIPTTIQGLKSLQF 70 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~-~~p~~~~~l~~L~~ 70 (360)
+++|+.|+|++|++++..+ ..+.++++|+.|++++|.++.. .|+.|++++|.+++ .+|..+..+++|+.
T Consensus 100 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 179 (306)
T 2z66_A 100 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179 (306)
T ss_dssp CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCE
Confidence 5778888888888886554 5688888888888888877542 57888888888876 57778888888888
Q ss_pred ecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhh
Q 040294 71 LSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 71 L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~ 111 (360)
|+|++|++++..|..|..+++|+.|+|++|++++..+..+.
T Consensus 180 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 220 (306)
T 2z66_A 180 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK 220 (306)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGT
T ss_pred EECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhcc
Confidence 88888888877788888888888888888888877665443
No 290
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.54 E-value=1.1e-14 Score=149.46 Aligned_cols=108 Identities=24% Similarity=0.323 Sum_probs=100.0
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++.|+.|+|++|+|+ .+|..+.++++|+.|+|++|.|+.+ .|+.|+|++|+|+ .+|..|++|++|++|+|
T Consensus 223 l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 300 (727)
T 4b8c_D 223 DQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYF 300 (727)
T ss_dssp CCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEEC
T ss_pred CCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEEC
Confidence 578999999999999 7888888999999999999999865 5899999999999 78999999999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
++|.|+ .+|.+|+.|++|+.|+|++|+|++.+|..+..
T Consensus 301 ~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 301 FDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp CSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred CCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 999998 88999999999999999999999999976644
No 291
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.53 E-value=2.3e-14 Score=143.98 Aligned_cols=129 Identities=27% Similarity=0.346 Sum_probs=108.4
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC---------c-ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH---------L-VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~---------~-~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++++.++++.|.+++..|..+..+++|+.|++++|.+.. + .|+.|+|++|+|++.+|..|+++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 5678889999999998888888999999999999987432 1 58899999999999999999999999999
Q ss_pred cccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
+|++|+|++..|..|..+++|+.|||++|+|++.+|..+..+. ..+....+.+|+..|.
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-----------~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----------SSLAFLNLTQNDFACT 582 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCC-----------TTCCEEECTTCCBCCS
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhh-----------CcCCEEEeeCCCCccc
Confidence 9999999988888899999999999999999998887765431 2345567788988775
No 292
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.53 E-value=3.9e-14 Score=128.03 Aligned_cols=111 Identities=35% Similarity=0.442 Sum_probs=97.0
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|+...+..|.++++|+.|++++|.++.+ .|+.|++++|++++..|..|+.+++|+.|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 67899999999999966666679999999999999998764 588999999999998888899999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
|++|++++..+..|..+++|+.|+|++|++++..+..+..
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 179 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDK 179 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhcc
Confidence 9999999766667899999999999999999887765544
No 293
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.53 E-value=4.4e-14 Score=129.25 Aligned_cols=109 Identities=34% Similarity=0.336 Sum_probs=86.0
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
+++|+.|+|++|+|++..+ .+.+++|+.|++++|+++.+ .|+.|++++|++++..|..|..+++|+.|+|
T Consensus 54 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 54 YTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp CTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 5778888888888885433 27788888888888888754 4788888888888777778888888888888
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
++|++++..|..|..+++|+.|+|++|+|++..+..+..
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~ 170 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNG 170 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTT
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcC
Confidence 888888766677888888888888888888766654443
No 294
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.53 E-value=3.4e-14 Score=128.67 Aligned_cols=111 Identities=30% Similarity=0.386 Sum_probs=98.4
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|++++..+..|.++++|+.|+|++|.++++ .|+.|++++|++++..+..++.+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 67899999999999987777899999999999999998753 588999999999988777899999999999
Q ss_pred cccccccc-CCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 73 LGHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 73 l~~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
|++|++++ .+|..|..+++|++|+|++|++++..+..+..
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 171 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh
Confidence 99999986 36999999999999999999999887765544
No 295
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=4.5e-14 Score=118.81 Aligned_cols=100 Identities=32% Similarity=0.347 Sum_probs=89.1
Q ss_pred CcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 5 LFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 5 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
.+.|++++|+|+ .+|..+. ++|+.|+|++|+|+++ .|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 5777664 8899999999999875 588999999999988787889999999999999
Q ss_pred cccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 76 NRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 76 N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
|+|++..|..|..+++|+.|+|++|+++...+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99997777789999999999999999998765
No 296
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.52 E-value=3.5e-14 Score=128.58 Aligned_cols=111 Identities=23% Similarity=0.233 Sum_probs=99.6
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..+..|.++++|+.|++++|.++.+ .|+.|++++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 3699999999999987777899999999999999998753 5899999999999998899999999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcc-cchhhhcc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI-IPLSLEKL 113 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~-~p~~l~~l 113 (360)
++|++++..+..+..+++|++|+|++|++++. +|..+..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l 148 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNL 148 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccC
Confidence 99999987777899999999999999999885 57766654
No 297
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.52 E-value=3.7e-14 Score=137.22 Aligned_cols=138 Identities=27% Similarity=0.375 Sum_probs=80.0
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeecccc-ccCC--------c-ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSN-ELRH--------L-VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~~--------~-~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|+|+...+..|.++++|+.|+|++| .++. + .|+.|++++|+++. +| .+..+++|+.|
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 212 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDEL 212 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEE
T ss_pred cccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEE
Confidence 567888888888888666666777777777777763 2221 1 45666666666653 33 35566666666
Q ss_pred cccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccc------cccc----cCCC--CCCCCcccccccCCCCC
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL------LEGE----IPRG--GPFTKFSSKSFIGNDLL 139 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~------~~~~----~p~~--~~~~~~~~~~~~~n~~~ 139 (360)
+|++|++++..|..|..+++|+.|+|++|++++..|..+..+. +++. +|.. ..+..+....+.+|+..
T Consensus 213 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 6666666655566666666666666666666665554433221 1111 1111 12234455667777776
Q ss_pred CC
Q 040294 140 CG 141 (360)
Q Consensus 140 cg 141 (360)
|.
T Consensus 293 Cd 294 (440)
T 3zyj_A 293 CN 294 (440)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 298
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.51 E-value=3.3e-14 Score=137.71 Aligned_cols=106 Identities=30% Similarity=0.322 Sum_probs=99.6
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|++++..|..|.++++|+.|+|++|.++++ .|+.|++++|++++..|.+|..+++|++|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 67899999999999998899999999999999999998764 589999999999999999999999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
|++|++++..+..|..+++|++|+|++|++++.+|
T Consensus 378 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 378 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999997666778999999999999999999988
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.51 E-value=4e-14 Score=142.19 Aligned_cols=141 Identities=21% Similarity=0.247 Sum_probs=102.7
Q ss_pred CCCCcEeeCCCCcccccCC-ccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccc-cCCccccCCCccce
Q 040294 2 LAALFQLDLRGNKLSGSIP-TCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLG-DIPTTIQGLKSLQF 70 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~-~~p~~~~~l~~L~~ 70 (360)
+++|+.|+|++|++++..| ..|.++++|+.|++++|.+++. .|+.|++++|++++ .+|..++.+++|+.
T Consensus 398 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 477 (606)
T 3vq2_A 398 LEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTF 477 (606)
T ss_dssp CTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCE
Confidence 5778888888888887776 5788888888888888877652 57888888888887 36777888888888
Q ss_pred ecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccc------ccc----ccCCC-CCCC-CcccccccCCCC
Q 040294 71 LSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL------LEG----EIPRG-GPFT-KFSSKSFIGNDL 138 (360)
Q Consensus 71 L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~------~~~----~~p~~-~~~~-~~~~~~~~~n~~ 138 (360)
|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+. +++ .+|.. ..+. .+....+.+|+.
T Consensus 478 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCC
T ss_pred EECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCc
Confidence 88888888887788888888888888888888888777665442 221 23332 1111 244556777877
Q ss_pred CCCC
Q 040294 139 LCGS 142 (360)
Q Consensus 139 ~cgs 142 (360)
.|..
T Consensus 558 ~c~c 561 (606)
T 3vq2_A 558 ACIC 561 (606)
T ss_dssp CCSS
T ss_pred ccCC
Confidence 7653
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.50 E-value=5.4e-14 Score=136.56 Aligned_cols=108 Identities=26% Similarity=0.315 Sum_probs=70.4
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeecccc-ccCCc---------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSN-ELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N-~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|+|++..+..|.++++|+.|++++| .++.+ .|+.|++++|++++. | .+..+++|+.|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEE
Confidence 678888888888888666667777777777777763 33221 466666666666643 3 35666666666
Q ss_pred cccccccccCCCccccCCCCCCeEeCcCCccCcccchhhh
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~ 111 (360)
+|++|++++..|..|..+++|+.|+|++|++++..|..+.
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 263 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFD 263 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhc
Confidence 6666666666666666666666666666666666554443
No 301
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.50 E-value=5.7e-14 Score=132.49 Aligned_cols=130 Identities=28% Similarity=0.269 Sum_probs=103.6
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+.+ .|+.|+|++|++++..|..|..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 67899999999999987778899999999999999998764 588999999999998899999999999999
Q ss_pred ccccccccCCCccc---cCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 73 LGHNRLQGSIPNSF---DDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 73 l~~N~l~g~~p~~~---~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
|++|+|++..+..| ..+++|+.|||++|+|++..+..+..+... ......+.+|+..|.
T Consensus 143 L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~----------~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAW----------VKNGLYLHNNPLECD 204 (361)
T ss_dssp CCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHH----------HHTTEECCSSCEECC
T ss_pred CCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHh----------hcceEEecCCCccCC
Confidence 99999995433444 679999999999999998776666554200 012345677877764
No 302
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.50 E-value=4.4e-14 Score=141.90 Aligned_cols=112 Identities=26% Similarity=0.290 Sum_probs=76.7
Q ss_pred CCCCcEeeCCCCcccccCCcc-ccCCcccCeeeccccccCCc---------ccCeEEcCCCccccc---CCccccCCCcc
Q 040294 2 LAALFQLDLRGNKLSGSIPTC-FSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGD---IPTTIQGLKSL 68 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~---~p~~~~~l~~L 68 (360)
+++|+.|+|++|++++..|.. |.++++|+.|++++|.+++. .|+.|++++|++++. .+..+..+++|
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 466777777777777665543 67777777777777776542 467777777777652 23456777777
Q ss_pred ceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 69 QFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 69 ~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
+.|+|++|++++..|..|..+++|+.|+|++|++++.+|..+..+
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 523 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL 523 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTC
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcc
Confidence 777777777776667777777777777777777777776655543
No 303
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.49 E-value=1e-13 Score=141.13 Aligned_cols=129 Identities=24% Similarity=0.303 Sum_probs=66.3
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-----------------ccCeEEcCCCcccccCCccccCC
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-----------------VLTRTDFSRNNLLGDIPTTIQGL 65 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-----------------~L~~l~l~~N~l~~~~p~~~~~l 65 (360)
++|+.|+|++|+|++..|..|.++++|+.|++++|.++.+ .|+.|++++|+++...+..|.++
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 4455555555555544444455555555555555544421 24455555555553222345555
Q ss_pred CccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCCCC
Q 040294 66 KSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCGS 142 (360)
Q Consensus 66 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cgs 142 (360)
++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|..+.. .+..+....+.+|+..|..
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----------~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP-----------AFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHH-----------HHTTCSEEECTTCCCCBCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcc-----------cccccCEEEccCCCcccCC
Confidence 55555555555555443444555555555555555555554443320 1234455677888888763
No 304
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.49 E-value=6.2e-14 Score=139.95 Aligned_cols=101 Identities=29% Similarity=0.290 Sum_probs=92.8
Q ss_pred CCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 4 ALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|.|+.+ .|+.|+|++|+|++ +| .++.+++|+.|+|++
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 58899999999996 676 99999999999999999875 58999999999997 67 899999999999999
Q ss_pred cccccCC-CccccCCCCCCeEeCcCCccCcccch
Q 040294 76 NRLQGSI-PNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 76 N~l~g~~-p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
|+|++.. |..|+.+++|+.|+|++|+|++.+|.
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 9999876 99999999999999999999998763
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.48 E-value=8.4e-14 Score=139.87 Aligned_cols=106 Identities=25% Similarity=0.303 Sum_probs=51.4
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|++++..|..|.++++|+.|+|++|.++++ .|+.|++++|++++..|..++++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 3444444444444444444444444444444444444432 2444555555554444444555555555555
Q ss_pred ccccccc-CCCccccCCCCCCeEeCcCCccCcccch
Q 040294 74 GHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 74 ~~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
++|++++ .+|..|+++++|++|+|++|++++..|.
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 5555543 3455555555555555555555554443
No 306
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.6e-13 Score=115.87 Aligned_cols=100 Identities=26% Similarity=0.316 Sum_probs=86.3
Q ss_pred CcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 5 LFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 5 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
-+.+++++|+|+ .+|..+. ++|+.|+|++|+|+++ .|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 368999999997 6887765 8899999999999875 488999999999987676789999999999999
Q ss_pred cccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 76 NRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 76 N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
|+|++..+..|..+++|+.|+|++|++....+
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99996666669999999999999999987654
No 307
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.47 E-value=3.4e-14 Score=143.97 Aligned_cols=109 Identities=18% Similarity=0.260 Sum_probs=96.1
Q ss_pred CCcEeeCCCCcccccCCccccCCcccCeeecccccc--------------------------------------------
Q 040294 4 ALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNEL-------------------------------------------- 39 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l-------------------------------------------- 39 (360)
.++.|+|++|.++|.+|++|++|++|+.|+|++|.+
T Consensus 82 ~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~ 161 (636)
T 4eco_A 82 RVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDL 161 (636)
T ss_dssp CEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHH
T ss_pred CEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHH
Confidence 578999999999999999999999999999999954
Q ss_pred ----------------------------------CCc--------ccCeEEcCCCccccc-----------------CCc
Q 040294 40 ----------------------------------RHL--------VLTRTDFSRNNLLGD-----------------IPT 60 (360)
Q Consensus 40 ----------------------------------~~~--------~L~~l~l~~N~l~~~-----------------~p~ 60 (360)
+++ .|+.|+|++|+++|. +|.
T Consensus 162 ~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~ 241 (636)
T 4eco_A 162 IKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE 241 (636)
T ss_dssp HHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHHhhcCccccccccccccchhhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCch
Confidence 111 478899999999986 899
Q ss_pred ccc--CCCccceecccccccccCCCccccCCCCCCeEeCcCCc-cCc-ccchhhhc
Q 040294 61 TIQ--GLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNN-LSE-IIPLSLEK 112 (360)
Q Consensus 61 ~~~--~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~-l~~-~~p~~l~~ 112 (360)
.++ ++++|++|+|++|++.|.+|..|+++++|++|+|++|+ ++| .+|..+..
T Consensus 242 ~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~ 297 (636)
T 4eco_A 242 DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQA 297 (636)
T ss_dssp CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHH
T ss_pred hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHh
Confidence 988 99999999999999999999999999999999999998 998 88876654
No 308
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.47 E-value=3.2e-13 Score=114.08 Aligned_cols=121 Identities=27% Similarity=0.362 Sum_probs=98.7
Q ss_pred CcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 5 LFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 5 L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
.+.+++++|+++ .+|..+. ++|+.|++++|.++++ .|+.|++++|++++..+..|+.+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 568999999998 5675553 7899999999998764 589999999999987777889999999999999
Q ss_pred cccccCCCccccCCCCCCeEeCcCCccCcccchhhhccccccccCCCCCCCCcccccccCCCCCC
Q 040294 76 NRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLC 140 (360)
Q Consensus 76 N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~c 140 (360)
|++++..+..|..+++|++|+|++|++++..+..+..+ ..+....+.+|+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l------------~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRL------------TSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC------------TTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCC------------cccCEEEecCCCeec
Confidence 99998777778999999999999999997766544332 334445566676554
No 309
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.46 E-value=1e-13 Score=135.25 Aligned_cols=107 Identities=36% Similarity=0.424 Sum_probs=59.5
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|.+++..|..|.++++|+.|+|++|.++.+ .|+.|++++|++++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 34555555555555555555555555555555555555432 355555555555555555555555555555
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccch
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
|++|.+++..|..|..+++|+.|+|++|++++..+.
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 555555555555555555666666666655554443
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.46 E-value=8.1e-14 Score=128.71 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=93.8
Q ss_pred CCCCcEeeCCCCcccccCCccc--cCCcccCeeeccccccCC-------------cccCeEEcCCCcccccCCccccCCC
Q 040294 2 LAALFQLDLRGNKLSGSIPTCF--SNLTALRNLHLDSNELRH-------------LVLTRTDFSRNNLLGDIPTTIQGLK 66 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~--~~l~~L~~L~l~~N~l~~-------------~~L~~l~l~~N~l~~~~p~~~~~l~ 66 (360)
+++|+.|+|++|++++.+|..+ ..+++|+.|+|++|++++ ..|+.|++++|++++..|..|+.++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 6889999999999999999886 999999999999999987 3689999999999999889999999
Q ss_pred ccceecccccccccC--CCccc--cCCCCCCeEeCcCCccCc
Q 040294 67 SLQFLSLGHNRLQGS--IPNSF--DDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 67 ~L~~L~l~~N~l~g~--~p~~~--~~l~~L~~l~ls~N~l~~ 104 (360)
+|+.|+|++|++.|. +|..+ ..+++|++|+|++|++++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~ 215 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMET 215 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcc
Confidence 999999999999875 34455 899999999999999995
No 311
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.46 E-value=1.5e-13 Score=136.82 Aligned_cols=139 Identities=25% Similarity=0.319 Sum_probs=95.0
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc----------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL----------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~----------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|.+++..+ .+..+++|+.|++++|.+++. .|+.|++++|.+++.+|..+..+++|+.|
T Consensus 372 ~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 372 TTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp CSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred cCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 5678888888888875443 477788888888888776542 46777888888877777777788888888
Q ss_pred cccccccc-cCCCccccCCCCCCeEeCcCCccCcccchhhhccc-----------cccccCCC-CCCCCcccccccCCCC
Q 040294 72 SLGHNRLQ-GSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL-----------LEGEIPRG-GPFTKFSSKSFIGNDL 138 (360)
Q Consensus 72 ~l~~N~l~-g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~-----------~~~~~p~~-~~~~~~~~~~~~~n~~ 138 (360)
+|++|+++ +.+|..|..+++|++|+|++|++++..|..+..+. +.+..|.. ..+..+....+.+|+.
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 88888876 56777788888888888888888777776554432 22222221 1234455556677766
Q ss_pred CCC
Q 040294 139 LCG 141 (360)
Q Consensus 139 ~cg 141 (360)
.|.
T Consensus 531 ~~~ 533 (570)
T 2z63_A 531 DCS 533 (570)
T ss_dssp CCC
T ss_pred cCC
Confidence 554
No 312
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.45 E-value=1.6e-13 Score=126.12 Aligned_cols=111 Identities=28% Similarity=0.418 Sum_probs=98.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc----------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL----------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~----------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|.++ .+|..+.++++|+.|++++|.++++ .|+.|++++|.+++..|..+..+++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 578999999999998 5777899999999999999988753 58899999999999999999999999999
Q ss_pred ccccccccc-CCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 72 SLGHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 72 ~l~~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
+|++|.+++ .+|..|..+++|++|+|++|++++..|..+..+
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 198 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSL 198 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCC
Confidence 999999987 588999999999999999999999888766543
No 313
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.44 E-value=3.1e-13 Score=135.90 Aligned_cols=110 Identities=23% Similarity=0.270 Sum_probs=92.3
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|.|++..|..|+++++|+.|+|++|.++++ .|+.|+|++|.+++..+..|+++++|+.|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 57889999999999987778899999999999999988764 488899999999876666678899999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhh
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~ 111 (360)
|++|.+++..|..|..+++|++|+|++|.+++..+..+.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 192 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIP 192 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCT
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhh
Confidence 999999988888899999999999999998886544433
No 314
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.43 E-value=1.7e-13 Score=117.90 Aligned_cols=104 Identities=20% Similarity=0.305 Sum_probs=91.1
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|++++|.++ .+| .+..+++|+.|++++|.++.+ .|+.|++++|++++..|..++.+++|+.|+|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 457899999999998 667 689999999999999987754 58999999999998888899999999999999
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|++++..|..|..+++|++|+|++|++.+.+|
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~ 153 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIM 153 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccH
Confidence 999998888999999999999999998444444
No 315
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.43 E-value=6.4e-13 Score=130.98 Aligned_cols=107 Identities=28% Similarity=0.373 Sum_probs=87.3
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-----------ccCeEEcCCCcccccCCcc-ccCCCccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-----------VLTRTDFSRNNLLGDIPTT-IQGLKSLQ 69 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-----------~L~~l~l~~N~l~~~~p~~-~~~l~~L~ 69 (360)
+++|+.|+|++|++++.+|..+.++++|+.|++++|+++++ .|+.|++++|++++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 56788999999999988888899999999999999988852 5888999999998866764 77888888
Q ss_pred eecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhh
Q 040294 70 FLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 70 ~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~ 111 (360)
.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..+.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 888888888877777664 68888888888888 5555443
No 316
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.43 E-value=6.5e-14 Score=141.86 Aligned_cols=108 Identities=24% Similarity=0.385 Sum_probs=99.1
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccc-cCC----------------cccCeEEcCCCcccccCCc--cc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNE-LRH----------------LVLTRTDFSRNNLLGDIPT--TI 62 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~----------------~~L~~l~l~~N~l~~~~p~--~~ 62 (360)
+++|+.|+|++|++.|.+|..|+++++|+.|++++|+ +++ ..|+.|++++|+++ .+|. .+
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l 326 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSL 326 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHH
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhh
Confidence 6889999999999999999999999999999999998 886 46899999999999 8998 99
Q ss_pred cCCCccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 63 QGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 63 ~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
+++++|+.|+|++|+++|.+| .|+.+++|+.|+|++|+++ .+|..+..
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 374 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCG 374 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEE
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhh
Confidence 999999999999999999999 9999999999999999998 66654443
No 317
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.42 E-value=9.6e-13 Score=131.21 Aligned_cols=104 Identities=29% Similarity=0.342 Sum_probs=84.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-----------ccCeEEcCCCcccccCCc-cccCCCccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-----------VLTRTDFSRNNLLGDIPT-TIQGLKSLQ 69 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-----------~L~~l~l~~N~l~~~~p~-~~~~l~~L~ 69 (360)
+++|+.|+|++|++++.+|..|.++++|+.|++++|+++++ .|+.|++++|++++.+|. .+..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 56889999999999988888899999999999999988853 478899999999886665 477888888
Q ss_pred eecccccccccCCCccccCCCCCCeEeCcCCccCcccch
Q 040294 70 FLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 70 ~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
.|+|++|++++.+|..+. ++|+.|+|++|+++. +|.
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~ 467 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPK 467 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCT
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cCh
Confidence 888888888877766654 678888888888874 444
No 318
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.42 E-value=8.8e-13 Score=122.48 Aligned_cols=108 Identities=22% Similarity=0.343 Sum_probs=69.1
Q ss_pred CCCCcEeeCCCCcccc--cCCccccCCcccCeeeccccccCCc------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLSG--SIPTCFSNLTALRNLHLDSNELRHL------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
+++|+.|+|++|.++. ..+..|.++++|+.|++++|.++.+ .|+.|++++|++++..|..+..+++|+.|+|
T Consensus 144 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 223 (330)
T 1xku_A 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223 (330)
T ss_dssp CTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEEC
T ss_pred CccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 3455555565555542 4455556666666666666665543 4666777777777666677777777777777
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhh
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSL 110 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l 110 (360)
++|++++..|..|..+++|+.|+|++|+++ .+|..+
T Consensus 224 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 259 (330)
T 1xku_A 224 SFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL 259 (330)
T ss_dssp CSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT
T ss_pred CCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh
Confidence 777777666666777777777777777776 344433
No 319
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.42 E-value=3.9e-13 Score=133.74 Aligned_cols=107 Identities=30% Similarity=0.386 Sum_probs=54.8
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|++++..|..|.++++|++|+|++|.++.+ .|+.|++++|++++..+..++++++|++|+|
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 131 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEEC
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEec
Confidence 4455555555555544444455555555555555544321 3455555555555443334555555555555
Q ss_pred ccccccc-CCCccccCCCCCCeEeCcCCccCcccchh
Q 040294 74 GHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEIIPLS 109 (360)
Q Consensus 74 ~~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 109 (360)
++|.+++ .+|..|+++++|++|++++|++++..|..
T Consensus 132 ~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 5555554 24555555555555555555555554443
No 320
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.41 E-value=8e-14 Score=145.16 Aligned_cols=104 Identities=20% Similarity=0.262 Sum_probs=62.9
Q ss_pred CCCCcEeeCCCCcccc-----------------cCCcccc--CCcccCeeeccccccCCc---------ccCeEEcCCCc
Q 040294 2 LAALFQLDLRGNKLSG-----------------SIPTCFS--NLTALRNLHLDSNELRHL---------VLTRTDFSRNN 53 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g-----------------~~p~~~~--~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~ 53 (360)
|++|+.|+|++|+|+| .+|..++ ++++|+.|+|++|.+.+. .|+.|++++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4556666666666665 2566555 666666666666655431 45666666665
Q ss_pred -ccc-cCCccccCCC-------ccceecccccccccCCCc--cccCCCCCCeEeCcCCccCcccc
Q 040294 54 -LLG-DIPTTIQGLK-------SLQFLSLGHNRLQGSIPN--SFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 54 -l~~-~~p~~~~~l~-------~L~~L~l~~N~l~g~~p~--~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++| .+|..++++. +|+.|+|++|+++ .+|. .|+++++|+.|+|++|+++ .+|
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 666 5665555444 6666666666666 5665 6666666666666666666 455
No 321
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.41 E-value=2.2e-13 Score=127.81 Aligned_cols=110 Identities=26% Similarity=0.309 Sum_probs=91.2
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..+..|.++++|+.|++++|.++++ .|+.|++++|++++..+..|+++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 4789999999999976666899999999999999988764 4889999999998766666899999999999
Q ss_pred cccccccCCCc--cccCCCCCCeEeCcCC-ccCcccchhhhcc
Q 040294 74 GHNRLQGSIPN--SFDDLVSLESLDLSNN-NLSEIIPLSLEKL 113 (360)
Q Consensus 74 ~~N~l~g~~p~--~~~~l~~L~~l~ls~N-~l~~~~p~~l~~l 113 (360)
++|++++ +|. .|..+++|++|++++| .+++..|..+..+
T Consensus 132 ~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 173 (353)
T 2z80_A 132 LGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGL 173 (353)
T ss_dssp TTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred CCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCC
Confidence 9999984 554 7899999999999999 4666666555443
No 322
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.41 E-value=4.4e-13 Score=115.29 Aligned_cols=102 Identities=20% Similarity=0.198 Sum_probs=89.3
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|++++|.++ .++.+..+++|+.|++++|.++.. .|+.|++++|++++..|..++.+++|+.|+
T Consensus 65 l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 678999999999776 445799999999999999999851 589999999999998899999999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCccc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEII 106 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~ 106 (360)
|++|++.+.+| .+..+++|+.|++++|++++..
T Consensus 143 L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~ 175 (197)
T 4ezg_A 143 LSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR 175 (197)
T ss_dssp CCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT
T ss_pred ccCCCCccccH-hhcCCCCCCEEECCCCCCcChH
Confidence 99998434676 6999999999999999998753
No 323
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.41 E-value=3.3e-13 Score=131.67 Aligned_cols=111 Identities=24% Similarity=0.293 Sum_probs=101.1
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..|..|.++++|+.|+|++|.++++ .|+.|+|++|++++..+..|.++++|+.|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 4789999999999988889999999999999999998764 5899999999999877778899999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
++|++++..|..|..+++|++|+|++|++++..|..+..+
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 151 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGL 151 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTC
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCC
Confidence 9999998889999999999999999999999888665543
No 324
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.41 E-value=9.5e-13 Score=132.29 Aligned_cols=81 Identities=35% Similarity=0.350 Sum_probs=71.8
Q ss_pred CCCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 1 YLAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 1 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
.+++|+.|+|++|.|++..|..|+++++|+.|+|++|.++.+ .|+.|++++|.+++..|..|+.+++|+.|
T Consensus 97 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 367899999999999988888899999999999999998764 58899999999999888889999999999
Q ss_pred cccccccccC
Q 040294 72 SLGHNRLQGS 81 (360)
Q Consensus 72 ~l~~N~l~g~ 81 (360)
+|++|.+++.
T Consensus 177 ~L~~N~l~~~ 186 (597)
T 3oja_B 177 QLSSNRLTHV 186 (597)
T ss_dssp ECTTSCCSBC
T ss_pred ECcCCCCCCc
Confidence 9999988854
No 325
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.41 E-value=8.9e-13 Score=125.32 Aligned_cols=104 Identities=24% Similarity=0.311 Sum_probs=56.7
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|+|++|.+++..|..|.++++|+.|+|++|.++++ .|+.|++++|+++...+..|+++++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 34555555555555554444555555555555555555442 255555555555533333345555555555
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
|++|++++..|..|..+++|++|+|++|++++.
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 555555554455555555555555555555544
No 326
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.40 E-value=4e-13 Score=136.78 Aligned_cols=106 Identities=29% Similarity=0.302 Sum_probs=59.4
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|++++..|..|.++++|+.|+|++|.++.+ .|+.|++++|++++..|..|+++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 4455555555555554455555555555555555554432 3555566666655555555566666666666
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccch
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
++|.+++..|..|.++++|++|+|++|++++..|.
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 66666655555556666666666666666555544
No 327
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.40 E-value=3.8e-13 Score=133.39 Aligned_cols=105 Identities=28% Similarity=0.287 Sum_probs=84.8
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..|..|.++++|++|+|++|+++++ .|+.|++++|++++..|..|+++++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 4688888888888887788888888888888888887653 4788888888888877777888888888888
Q ss_pred ccccccc-CCCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|++++ .+|..|+++++|++|+|++|++.+.+|
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~ 140 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIR 140 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEEC
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccC
Confidence 8888875 356778888888888888888555554
No 328
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.40 E-value=4.4e-13 Score=113.19 Aligned_cols=101 Identities=25% Similarity=0.250 Sum_probs=87.2
Q ss_pred CCCCcEeeCCCCcccccCCccccCCc-ccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLT-ALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~-~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
+++|+.|+|++|+|+. +|. +..+. +|+.|++++|.++++ .|+.|++++|++++..|..++.+++|+.|+|
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 95 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELIL 95 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEEC
T ss_pred cCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcccccccCCCCCEEECCCCcccccCcchhhcCCCCCEEEC
Confidence 5789999999999994 554 55555 999999999999864 5899999999999765566699999999999
Q ss_pred cccccccCCCc--cccCCCCCCeEeCcCCccCcc
Q 040294 74 GHNRLQGSIPN--SFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 74 ~~N~l~g~~p~--~~~~l~~L~~l~ls~N~l~~~ 105 (360)
++|+++ .+|. .+..+++|+.|+|++|+++..
T Consensus 96 ~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~ 128 (176)
T 1a9n_A 96 TNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNK 128 (176)
T ss_dssp CSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS
T ss_pred CCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCc
Confidence 999996 6776 899999999999999999854
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.40 E-value=3e-13 Score=124.66 Aligned_cols=102 Identities=19% Similarity=0.144 Sum_probs=74.3
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC------------c-ccCeEEcCCCcccccCCc----cccC
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH------------L-VLTRTDFSRNNLLGDIPT----TIQG 64 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~------------~-~L~~l~l~~N~l~~~~p~----~~~~ 64 (360)
+++|+.|+|++|+|++..|..|+++++|+.|+|++|++.+ + .|+.|++++|+++. +|. .+++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 5677888888888877777778888888888888887542 1 47778888888762 222 2467
Q ss_pred CCccceecccccccccCCCccccCC---CCCCeEeCcCCccCc
Q 040294 65 LKSLQFLSLGHNRLQGSIPNSFDDL---VSLESLDLSNNNLSE 104 (360)
Q Consensus 65 l~~L~~L~l~~N~l~g~~p~~~~~l---~~L~~l~ls~N~l~~ 104 (360)
+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+.
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~ 265 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ 265 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc
Confidence 7788888888888887767777666 578888888888873
No 330
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.40 E-value=1.1e-12 Score=121.90 Aligned_cols=103 Identities=27% Similarity=0.429 Sum_probs=63.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
+++|+.|+|++|++++..|..|.++++|+.|++++|.++.+ .|+.|++++|++++..+..|.++++|+.|+|++
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 154 (330)
T 1xku_A 75 LKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGT 154 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCS
T ss_pred CCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCC
Confidence 45566666666666655565666666666666666665543 356666666666665555566666666666666
Q ss_pred cccc--cCCCccccCCCCCCeEeCcCCccCc
Q 040294 76 NRLQ--GSIPNSFDDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 76 N~l~--g~~p~~~~~l~~L~~l~ls~N~l~~ 104 (360)
|.++ +..|..|..+++|++|++++|.++.
T Consensus 155 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 155 NPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 6664 2455666666666666666666654
No 331
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.40 E-value=1.6e-12 Score=120.94 Aligned_cols=107 Identities=25% Similarity=0.367 Sum_probs=64.7
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccC-------------------------Cc------ccCeEEcCC
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELR-------------------------HL------VLTRTDFSR 51 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-------------------------~~------~L~~l~l~~ 51 (360)
++|+.|+|++|++++..+..|.++++|+.|++++|.++ .+ .|+.|++++
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~ 202 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDH 202 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCS
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCC
Confidence 45677777777777554555677777777777777664 21 245555555
Q ss_pred CcccccCCccccCCCccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhh
Q 040294 52 NNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSL 110 (360)
Q Consensus 52 N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l 110 (360)
|++++..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+++ .+|..+
T Consensus 203 n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 203 NKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 5655555555666666666666666666555555666666666666666665 344333
No 332
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.40 E-value=3.9e-13 Score=112.48 Aligned_cols=102 Identities=25% Similarity=0.214 Sum_probs=90.4
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC-c--------ccCeEEcCCCcccccC-CccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH-L--------VLTRTDFSRNNLLGDI-PTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~--------~L~~l~l~~N~l~~~~-p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|.|++. ..|..+++|+.|+|++|.+++ + .|+.|++++|++++.. +..+..+++|+.|
T Consensus 48 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 48 FVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEE
T ss_pred CCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEE
Confidence 57899999999999975 789999999999999999987 3 5899999999998753 3789999999999
Q ss_pred cccccccccCCC---ccccCCCCCCeEeCcCCccCcc
Q 040294 72 SLGHNRLQGSIP---NSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 72 ~l~~N~l~g~~p---~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
+|++|++++..+ ..|..+++|++|++++|.+...
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 999999996544 4899999999999999998754
No 333
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.40 E-value=2.8e-13 Score=134.36 Aligned_cols=113 Identities=25% Similarity=0.314 Sum_probs=101.1
Q ss_pred CCCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccc-cCCccccCCCccce
Q 040294 1 YLAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLG-DIPTTIQGLKSLQF 70 (360)
Q Consensus 1 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~-~~p~~~~~l~~L~~ 70 (360)
.+++|+.|+|++|+|++..|..|.++++|+.|+|++|.++++ .|+.|++++|++++ .+|..++++++|++
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 127 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127 (549)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccE
Confidence 368899999999999998889999999999999999999874 58999999999997 46788999999999
Q ss_pred ecccccccccCCC-ccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 71 LSLGHNRLQGSIP-NSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 71 L~l~~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
|+|++|++.+.+| ..|..+++|++|+|++|++++.+|..+..+
T Consensus 128 L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred EECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 9999999655665 689999999999999999999988776554
No 334
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.39 E-value=4.2e-13 Score=123.90 Aligned_cols=101 Identities=23% Similarity=0.140 Sum_probs=45.8
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC-------------cccCeEEcCCCcccc--cCC-ccccCCC
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH-------------LVLTRTDFSRNNLLG--DIP-TTIQGLK 66 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-------------~~L~~l~l~~N~l~~--~~p-~~~~~l~ 66 (360)
++|+.|+|++|+|++..|..|+++++|+.|+|++|++.+ ..|+.|++++|++++ .++ ..+..++
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 228 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC
Confidence 344445555555544444445555555555555554321 034445555555442 111 1223444
Q ss_pred ccceecccccccccCCC-ccccCCCCCCeEeCcCCccC
Q 040294 67 SLQFLSLGHNRLQGSIP-NSFDDLVSLESLDLSNNNLS 103 (360)
Q Consensus 67 ~L~~L~l~~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~ 103 (360)
+|+.|+|++|++++.+| ..+..+++|+.|+|++|+|+
T Consensus 229 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 55555555555554433 23344455555555555554
No 335
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.39 E-value=1.2e-12 Score=126.96 Aligned_cols=105 Identities=25% Similarity=0.248 Sum_probs=83.8
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|+|++..|..|.++++|+.|+|++|.++++ .|+.|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 4688899999999888888888999999999999888753 5888899999888777777888888999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|+++...+..|..+++|+.|+|++|+..+.+|
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~ 188 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS 188 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccC
Confidence 9988886666677888888888888744333333
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.39 E-value=3e-13 Score=119.82 Aligned_cols=108 Identities=21% Similarity=0.318 Sum_probs=93.1
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccc-cCCc---------ccCeEEcCC-CcccccCCccccCCCcccee
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNE-LRHL---------VLTRTDFSR-NNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~~---------~L~~l~l~~-N~l~~~~p~~~~~l~~L~~L 71 (360)
++|+.|+|++|+|++..+..|.++++|+.|++++|. ++.+ .|+.|++++ |++++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 468999999999997777789999999999999996 7653 589999998 99998877889999999999
Q ss_pred cccccccccCCCccccCCCCCC---eEeCcCC-ccCcccchhhhc
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLE---SLDLSNN-NLSEIIPLSLEK 112 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~---~l~ls~N-~l~~~~p~~l~~ 112 (360)
+|++|++++ +|. |..+++|+ +|++++| +++++.+..+..
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~ 153 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQG 153 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccc
Confidence 999999985 777 88888888 9999999 888877665544
No 337
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.39 E-value=4.2e-13 Score=109.93 Aligned_cols=97 Identities=24% Similarity=0.223 Sum_probs=86.5
Q ss_pred CCCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC-c--------ccCeEEcCCCccccc-CCccccCCCccce
Q 040294 1 YLAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH-L--------VLTRTDFSRNNLLGD-IPTTIQGLKSLQF 70 (360)
Q Consensus 1 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~--------~L~~l~l~~N~l~~~-~p~~~~~l~~L~~ 70 (360)
.+++|+.|+|++|+|++. ..+.++++|+.|++++|.+++ + .|+.|++++|++++. .|..++.+++|+.
T Consensus 40 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~ 117 (149)
T 2je0_A 40 EFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKS 117 (149)
T ss_dssp TCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCE
T ss_pred hcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCE
Confidence 367899999999999976 789999999999999999998 3 599999999999984 4588999999999
Q ss_pred ecccccccccCCC---ccccCCCCCCeEeCcC
Q 040294 71 LSLGHNRLQGSIP---NSFDDLVSLESLDLSN 99 (360)
Q Consensus 71 L~l~~N~l~g~~p---~~~~~l~~L~~l~ls~ 99 (360)
|++++|++++..+ ..+..+++|+.||+++
T Consensus 118 L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 118 LDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999997655 5799999999999874
No 338
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.38 E-value=2.3e-13 Score=133.53 Aligned_cols=104 Identities=19% Similarity=0.151 Sum_probs=81.9
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc----------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL----------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~----------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|.|++..|..|+++++|+.|+|++|.+++. .|+.|+|++|.+++.. .+..+++|+.|
T Consensus 119 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L 196 (487)
T 3oja_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTL 196 (487)
T ss_dssp CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccc--ccccCCCCCEE
Confidence 56788889999999888888888888888999988888752 4788888888888762 24458888888
Q ss_pred cccccccccCCCccccCCCCCCeEeCcCCccCcccchh
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLS 109 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 109 (360)
+|++|+|++ +|..|..+++|+.|+|++|+|++ +|..
T Consensus 197 ~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~ 232 (487)
T 3oja_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKA 232 (487)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTT
T ss_pred ECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchh
Confidence 888888886 44458888888888888888886 3433
No 339
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.38 E-value=2.4e-12 Score=119.71 Aligned_cols=98 Identities=27% Similarity=0.397 Sum_probs=58.9
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|++++..|..|.++++|+.|++++|.++++ .|+.|++++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 3466666666666655555666666666666666666543 3566666666665 3444443 56666666
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccC
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLS 103 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 103 (360)
++|++++..+..|..+++|+.|++++|+++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccc
Confidence 666666444445666666666666666664
No 340
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.38 E-value=8.4e-13 Score=123.83 Aligned_cols=107 Identities=27% Similarity=0.295 Sum_probs=48.7
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCC-ccccCCCccceec
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIP-TTIQGLKSLQFLS 72 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p-~~~~~l~~L~~L~ 72 (360)
++|+.|+|++|++++..|..|.++++|+.|++++|.++++ .|+.|++++|++++..+ ..+..+++|+.|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR 155 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE
Confidence 4444455555544444444444444455555554444432 24444555444443222 2344444455555
Q ss_pred cccc-ccccCCCccccCCCCCCeEeCcCCccCcccchh
Q 040294 73 LGHN-RLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLS 109 (360)
Q Consensus 73 l~~N-~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~ 109 (360)
+++| .+++..|..|..+++|++|++++|++++..|..
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 193 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKS 193 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHH
Confidence 5444 233333344444444555555555444444433
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.38 E-value=8.8e-13 Score=121.55 Aligned_cols=102 Identities=27% Similarity=0.396 Sum_probs=88.6
Q ss_pred CCCCCcEeeCCCCccccc--C--CccccCCcccCeeeccccccCCc------------ccCeEEcCCCcccccCCccccC
Q 040294 1 YLAALFQLDLRGNKLSGS--I--PTCFSNLTALRNLHLDSNELRHL------------VLTRTDFSRNNLLGDIPTTIQG 64 (360)
Q Consensus 1 ~l~~L~~L~L~~N~l~g~--~--p~~~~~l~~L~~L~l~~N~l~~~------------~L~~l~l~~N~l~~~~p~~~~~ 64 (360)
.+++|+.|+|++|++.+. + +..++++++|+.|+|++|+++.+ .|+.|++++|++++.+|..++.
T Consensus 167 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 246 (310)
T 4glp_A 167 AFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPR 246 (310)
T ss_dssp CCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSS
T ss_pred cCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHh
Confidence 367899999999998763 2 23357899999999999999752 5899999999999998988888
Q ss_pred C---CccceecccccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 65 L---KSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 65 l---~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
+ ++|+.|+|++|+|+ .+|..+. ++|+.|||++|++++.
T Consensus 247 ~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~ 287 (310)
T 4glp_A 247 CMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA 287 (310)
T ss_dssp CCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC
T ss_pred ccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC
Confidence 7 69999999999999 7888775 8999999999999984
No 342
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.38 E-value=8.9e-13 Score=132.36 Aligned_cols=102 Identities=25% Similarity=0.228 Sum_probs=67.6
Q ss_pred CCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 4 ALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
.++.|+|++|+|++..|..|.++++|++|+|++|.++.+ .|+.|++++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 466777777777766666677777777777777766542 46666777776666666666666666666666
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
+|++++..|..|+++++|++|+|++|++++.
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~ 144 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSI 144 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCC
T ss_pred ccCcccCCcchhccCCcccEEECCCCccccc
Confidence 6666654456666666666666666666653
No 343
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.38 E-value=3.1e-13 Score=125.07 Aligned_cols=100 Identities=19% Similarity=0.154 Sum_probs=69.5
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc----------ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL----------VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~----------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
+++|+.|+|++|++++..|..+..+++|+.|++++|.++.+ .|+.|++++|++++. | ....+++|+.|
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L 196 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTL 196 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEE
Confidence 45677788888888776666777777788888887777642 467777777777654 2 23346777777
Q ss_pred cccccccccCCCccccCCCCCCeEeCcCCccCc
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 104 (360)
+|++|++++ +|..|..+++|+.|+|++|++++
T Consensus 197 ~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~ 228 (317)
T 3o53_A 197 DLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL 228 (317)
T ss_dssp ECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE
T ss_pred ECCCCcCCc-chhhhcccCcccEEECcCCcccc
Confidence 777777774 44457777777777777777764
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.37 E-value=6e-13 Score=117.87 Aligned_cols=104 Identities=18% Similarity=0.266 Sum_probs=90.9
Q ss_pred CCCCcEeeCCCCc-ccccCCccccCCcccCeeeccc-cccCCc---------ccCeEEcCCCcccccCCccccCCCccc-
Q 040294 2 LAALFQLDLRGNK-LSGSIPTCFSNLTALRNLHLDS-NELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQ- 69 (360)
Q Consensus 2 l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~l~~-N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~- 69 (360)
+++|+.|+|++|+ +++..+..|.++++|+.|++++ |.++.+ .|+.|++++|++++ +|. ++.+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 6789999999997 8876667899999999999998 988764 58999999999987 676 88888888
Q ss_pred --eeccccc-ccccCCCccccCCCCCC-eEeCcCCccCcccc
Q 040294 70 --FLSLGHN-RLQGSIPNSFDDLVSLE-SLDLSNNNLSEIIP 107 (360)
Q Consensus 70 --~L~l~~N-~l~g~~p~~~~~l~~L~-~l~ls~N~l~~~~p 107 (360)
.|++++| ++++..+..|..+++|+ .|+|++|+++.+.+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~ 173 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQG 173 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECT
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCH
Confidence 9999999 99976677799999999 99999999984443
No 345
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.37 E-value=2e-12 Score=124.94 Aligned_cols=105 Identities=24% Similarity=0.247 Sum_probs=81.4
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++++.|+|++|+|++..+..|.++++|+.|+|++|.++.+ .|+.|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 4578888888888877778888888888888888887653 4788888888888766667888888888888
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|+++...+..|..+++|++|+|++|+..+.+|
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~ 177 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS 177 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeC
Confidence 8888886666677888888888888754333333
No 346
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.37 E-value=9.1e-13 Score=137.67 Aligned_cols=108 Identities=29% Similarity=0.334 Sum_probs=54.4
Q ss_pred CCCcEeeCCCCcccccC-CccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCcc--ccCCCccce
Q 040294 3 AALFQLDLRGNKLSGSI-PTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTT--IQGLKSLQF 70 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~-p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~--~~~l~~L~~ 70 (360)
++|+.|+|++|.+.+.+ |..|.++++|++|+|++|.++++ .|+.|+|++|++++.+|.. |+++++|+.
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 34444444444333333 33444444555555554444432 3555555555555544443 555555555
Q ss_pred ecccccccccCCC-ccccCCCCCCeEeCcCCccCcccchhh
Q 040294 71 LSLGHNRLQGSIP-NSFDDLVSLESLDLSNNNLSEIIPLSL 110 (360)
Q Consensus 71 L~l~~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~~p~~l 110 (360)
|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 5555555554433 345556666666666666655555444
No 347
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.36 E-value=1.8e-12 Score=116.80 Aligned_cols=96 Identities=27% Similarity=0.384 Sum_probs=49.2
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
++|+.|++++|+|+ .+| .+..+++|+.|+|++|+++++ .|+.|++++|++++ +|.. .. ++|+.|+|++
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~ 115 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSPLKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDN 115 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCS
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChhhccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccC
Confidence 45555555555555 233 455555555555555555543 25555555555554 2221 11 5555555555
Q ss_pred cccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 76 NRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 76 N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
|++++ +| .+..+++|+.|+|++|++++.
T Consensus 116 N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 116 NELRD-TD-SLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp SCCSB-SG-GGTTCTTCCEEECTTSCCCBC
T ss_pred CccCC-Ch-hhcCcccccEEECCCCcCCCC
Confidence 55553 22 355555555555555555543
No 348
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.36 E-value=7.9e-13 Score=122.30 Aligned_cols=101 Identities=21% Similarity=0.194 Sum_probs=79.5
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccc-cCCCccceec
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTI-QGLKSLQFLS 72 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~-~~l~~L~~L~ 72 (360)
++|+.|++++|+|++..+. .+++|+.|++++|.++.+ .|+.|++++|.+++..|..+ ..+++|+.|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4667777777777755443 357799999999998864 48889999999998877777 4789999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccch
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
|++|++++. |. ...+++|++|+|++|++++..+.
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~ 209 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE 209 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcchhh
Confidence 999999854 43 34589999999999999987554
No 349
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.35 E-value=6.9e-14 Score=143.64 Aligned_cols=113 Identities=27% Similarity=0.304 Sum_probs=96.2
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
+++|+.|+|++|+|+ .+|..|++|++|+.|+|++|.|+.+ .|+.|+|++|.|+ .+|..|+++++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 688999999999999 8999999999999999999999875 5899999999997 78999999999999999
Q ss_pred cccccccCCCccccCCCC-CCeEeCcCCccCcccchhhhccccc
Q 040294 74 GHNRLQGSIPNSFDDLVS-LESLDLSNNNLSEIIPLSLEKLLLE 116 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~-L~~l~ls~N~l~~~~p~~l~~l~~~ 116 (360)
++|+|+|.+|..+..+.. +..|+|++|.++|.+|..+..+.++
T Consensus 324 ~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~~l~l~ 367 (727)
T 4b8c_D 324 EGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIEIN 367 (727)
T ss_dssp TTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-------
T ss_pred CCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccceeEee
Confidence 999999999998876532 2358999999999999988777544
No 350
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.35 E-value=1.4e-12 Score=136.27 Aligned_cols=112 Identities=29% Similarity=0.274 Sum_probs=99.1
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC---------c-ccCeEEcCCCcccccCCccccCCCcccee
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH---------L-VLTRTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~---------~-~L~~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
.++|+.|||++|+|++..|..|.++++|++|+|++|.+.+ + .|+.|+|++|++++..|.+|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 3679999999999999889999999999999999994332 2 59999999999999999999999999999
Q ss_pred cccccccccCCCcc--ccCCCCCCeEeCcCCccCcccc-hhhhcc
Q 040294 72 SLGHNRLQGSIPNS--FDDLVSLESLDLSNNNLSEIIP-LSLEKL 113 (360)
Q Consensus 72 ~l~~N~l~g~~p~~--~~~l~~L~~l~ls~N~l~~~~p-~~l~~l 113 (360)
+|++|.+++.+|.. |.++++|++|||++|.+++..| ..+..+
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L 147 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKL 147 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhC
Confidence 99999999877765 9999999999999999998865 344443
No 351
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.35 E-value=7.8e-13 Score=130.39 Aligned_cols=100 Identities=26% Similarity=0.336 Sum_probs=75.2
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|++++..|..|.++++|+.|+|++|+++++ .|+.|++++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 4677888888888776667778888888888888877653 4777888888877 45655 6778888888
Q ss_pred ccccccc-CCCccccCCCCCCeEeCcCCccCcc
Q 040294 74 GHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 74 ~~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
++|++++ .+|..|+++++|++|+|++|++++.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 130 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS 130 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchh
Confidence 8888876 4677788888888888888877764
No 352
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.35 E-value=2.2e-12 Score=115.73 Aligned_cols=135 Identities=14% Similarity=0.113 Sum_probs=106.6
Q ss_pred HHhCCCCCCCeeccCCCccEEEEEccCCcEEEehh-----------hHHHHHHhhcCC-CCCeeEEEEEecCCCeEEEEE
Q 040294 197 RATNGFSANNLIGRGSFGSVYKARLQDGMEFAIKS-----------FDVECEVMKSIH-HRNLVKIISSCSNEDFRALVL 264 (360)
Q Consensus 197 ~~~~~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-----------~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 264 (360)
...++|.....++.|+.+.||++... ++.+++|. +..|+++++.+. +..+.++++++...+..|+||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34467877777888888999998864 57888874 568999998885 677889999998888999999
Q ss_pred EccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 040294 265 EYMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFG--------------------------------------- 305 (360)
Q Consensus 265 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~--------------------------------------- 305 (360)
||++|.+|.+.+.. ......++.+++++++.||..
T Consensus 90 e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999876321 112346788999999999951
Q ss_pred -----------------CCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 306 -----------------FSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 306 -----------------~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
....++|+|+++.||+++++..+.|+||+.+..
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999998754
No 353
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.35 E-value=9.4e-13 Score=137.14 Aligned_cols=107 Identities=24% Similarity=0.385 Sum_probs=98.0
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccc-cCC--c---------------ccCeEEcCCCcccccCCc--c
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNE-LRH--L---------------VLTRTDFSRNNLLGDIPT--T 61 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~-l~~--~---------------~L~~l~l~~N~l~~~~p~--~ 61 (360)
+++|+.|+|++|++.|.+|..|+++++|+.|+|++|+ +++ + .|+.|++++|+++ .+|. .
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 6889999999999999999999999999999999998 775 1 5899999999999 8998 9
Q ss_pred ccCCCccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhc
Q 040294 62 IQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 112 (360)
Q Consensus 62 ~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~ 112 (360)
|+++++|+.|+|++|+++ .+| .|+.+++|+.|+|++|+++ .+|..+..
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~ 616 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCA 616 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCE
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhh
Confidence 999999999999999999 889 8999999999999999999 67755443
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.33 E-value=3e-12 Score=117.03 Aligned_cols=100 Identities=32% Similarity=0.511 Sum_probs=58.6
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|+|++|++++..| +.++++|+.|++++|.++.+ .|+.|++++|++++. +.+..+++|+.|+|+
T Consensus 67 l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 67 LPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLG 142 (291)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGGGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECC
T ss_pred CCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCChhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEcc
Confidence 4556666666666664332 56666666666666665543 356666666666542 345566666666666
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|++++. ..+..+++|+.|+|++|++++..|
T Consensus 143 ~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 143 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 6666643 455666666666666666665544
No 355
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.33 E-value=4e-12 Score=106.83 Aligned_cols=102 Identities=21% Similarity=0.262 Sum_probs=87.0
Q ss_pred ccCeeeccccccCCc------ccCeEEcCCCcccccCCccccCCCccceecccccccccCCCccccCCCCCCeEeCcCCc
Q 040294 28 ALRNLHLDSNELRHL------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNN 101 (360)
Q Consensus 28 ~L~~L~l~~N~l~~~------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~ 101 (360)
+.+.+++++|.|+.+ .++.|+|++|+|++..|..|+.+++|+.|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 467899999999876 58999999999999999999999999999999999998777788999999999999999
Q ss_pred cCcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 102 LSEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 102 l~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
|+++.|..+..+ ..+....+.+|+..|.
T Consensus 90 l~~~~~~~~~~l------------~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 90 LKSIPRGAFDNL------------KSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCTTTTTTC------------TTCCEEECCSSCBCTT
T ss_pred cCEeCHHHhcCC------------CCCCEEEeCCCCCCCC
Confidence 998877655543 3445566777776664
No 356
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=2.3e-12 Score=120.49 Aligned_cols=99 Identities=23% Similarity=0.239 Sum_probs=86.0
Q ss_pred cEeeCCCC-cccccCCccccCCcccCeeeccc-cccCCc---------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 6 FQLDLRGN-KLSGSIPTCFSNLTALRNLHLDS-NELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 6 ~~L~L~~N-~l~g~~p~~~~~l~~L~~L~l~~-N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
..++++++ +|+ .+|. |..+++|+.|+|++ |.|+++ .|+.|+|++|+|++.+|..|+++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788988 898 5888 99999999999996 998764 58999999999999999999999999999999
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|+|++..|..|..+. |+.|+|++|+|.....
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 9999976666676665 9999999999987654
No 357
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.33 E-value=1.6e-12 Score=123.59 Aligned_cols=112 Identities=18% Similarity=0.227 Sum_probs=97.7
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
+++|+.|++++|.++...+..|.++++|+.|++++|.++.+ .|+.|++++|++++..|..|+++++|+.|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 57899999999999965555589999999999999998764 589999999999999899999999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
|++|+++...+..|..+++|++|+|++|++++..|..+..+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 164 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT 164 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSC
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCC
Confidence 99999995444557999999999999999999888666543
No 358
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.32 E-value=1.7e-12 Score=129.38 Aligned_cols=100 Identities=30% Similarity=0.359 Sum_probs=79.1
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
++|+.|+|++|.|++..|..|.++++|+.|+|++|+++++ .|+.|++++|+++ .+|.. .+++|+.|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 4688888888888877677888888888888888887754 4788888888887 46655 7888888888
Q ss_pred ccccccc-CCCccccCCCCCCeEeCcCCccCcc
Q 040294 74 GHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 74 ~~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
++|++++ .+|..|+++++|++|+|++|++++.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~ 161 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL 161 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC
Confidence 8888876 3567888888888888888888764
No 359
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.31 E-value=4.5e-12 Score=118.32 Aligned_cols=104 Identities=26% Similarity=0.411 Sum_probs=58.5
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|++++|.+++..+ +..+++|+.|++++|.++.+ .|+.|++++|.+++. +.+..+++|+.|+++
T Consensus 198 l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 198 LTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVG 273 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECC
T ss_pred CCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEcc
Confidence 3456666666666654322 55566666666666665543 355666666665542 345556666666666
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccchhhh
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~ 111 (360)
+|++++ + ..+..+++|+.|+|++|++++..|..+.
T Consensus 274 ~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 274 SNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp SSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred CCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 666653 2 2355566666666666666555554443
No 360
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.31 E-value=1.7e-12 Score=109.48 Aligned_cols=98 Identities=21% Similarity=0.344 Sum_probs=87.4
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCc--cccCCCcccee
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPT--TIQGLKSLQFL 71 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~--~~~~l~~L~~L 71 (360)
++|+.|+|++|+|++. ..|.++++|+.|++++|.++.+ .|+.|++++|+++ .+|. .+..+++|+.|
T Consensus 42 ~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 42 DQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYL 118 (176)
T ss_dssp TCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEE
T ss_pred CCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEE
Confidence 4899999999999975 6799999999999999999864 5899999999995 5666 88999999999
Q ss_pred cccccccccCCCcc----ccCCCCCCeEeCcCCccCc
Q 040294 72 SLGHNRLQGSIPNS----FDDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 72 ~l~~N~l~g~~p~~----~~~l~~L~~l~ls~N~l~~ 104 (360)
+|++|+++ .+|.. +..+++|+.||+++|.+..
T Consensus 119 ~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 119 CILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999998 56775 9999999999999998764
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.30 E-value=6.6e-12 Score=114.76 Aligned_cols=99 Identities=28% Similarity=0.423 Sum_probs=88.6
Q ss_pred CCCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 1 YLAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 1 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
.+++|+.|+|++|++++ +| .+..+++|+.|++++|.++.+ .|+.|++++|++++. +.++.+++|+.|+|
T Consensus 88 ~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 88 NLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (291)
T ss_dssp TCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred cCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEc
Confidence 36889999999999986 44 499999999999999999875 589999999999975 67999999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
++|++++..| +..+++|+.|+|++|++++.
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCCC
Confidence 9999996544 99999999999999999874
No 362
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.30 E-value=3e-12 Score=127.57 Aligned_cols=104 Identities=29% Similarity=0.320 Sum_probs=75.7
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-----ccCeEEcCCCcccccCCccccCCCcc-------c
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-----VLTRTDFSRNNLLGDIPTTIQGLKSL-------Q 69 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-----~L~~l~l~~N~l~~~~p~~~~~l~~L-------~ 69 (360)
+++|+.|+|++|+|++ +|. .+++|+.|+|++|.|+++ .|+.|++++|+|+ .+|. |.. +| +
T Consensus 139 l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~l~~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~ 210 (571)
T 3cvr_A 139 PALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPELPESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEI 210 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-CC----------CCE
T ss_pred CccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcchhhCCCCEEECcCCCCC-chhh-HHH--hhhcccccce
Confidence 4566677777777764 554 456777777777777664 4777888888877 5666 544 66 8
Q ss_pred eecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccc
Q 040294 70 FLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL 114 (360)
Q Consensus 70 ~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~ 114 (360)
.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..+.
T Consensus 211 ~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 211 FFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp EEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred EEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 8888888888 6788888888899999999999888888877764
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.30 E-value=5.8e-12 Score=126.56 Aligned_cols=100 Identities=32% Similarity=0.516 Sum_probs=66.6
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
|++|+.|+|++|+|++..| +..+++|+.|+|++|.|+.+ .|+.|+|++|++++. +.+..+++|+.|+|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLG 139 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECC
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECC
Confidence 5667777777777775433 66777777777777776653 466777777777652 346667777777777
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|+|++. ..|..+++|+.|+|++|+|++.+|
T Consensus 140 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 140 NNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 7777643 456667777777777777766655
No 364
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.29 E-value=6.3e-12 Score=115.84 Aligned_cols=98 Identities=26% Similarity=0.472 Sum_probs=48.5
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|+|++|++++. +. +.++++|+.|+|++|.++.+ .|+.|++++|++++. | .+..+++|+.|+|+
T Consensus 62 l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~ 137 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLD 137 (308)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSCCGGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECC
T ss_pred cCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCCchhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECC
Confidence 34455555555555532 22 55555555555555555442 345555555555442 2 25555555555555
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
+|++++. |. +..+++|+.|+|++|++++.
T Consensus 138 ~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 138 LNQITNI-SP-LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp SSCCCCC-GG-GGGCTTCCEEECCSSCCCCC
T ss_pred CCccCcC-cc-ccCCCCccEEEccCCcCCCC
Confidence 5555532 22 45555555555555555543
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.28 E-value=8.2e-12 Score=115.06 Aligned_cols=101 Identities=27% Similarity=0.523 Sum_probs=84.3
Q ss_pred CCCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 1 YLAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 1 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
.+++|+.|+|++|+|++ +| .+..+++|+.|++++|.++.+ .|+.|++++|++++..+ ++.+++|+.|+|
T Consensus 83 ~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 83 NLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp TCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred cCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCchhhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 36789999999999985 33 688899999999999998764 58899999999987544 888999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
++|++++ +|. +..+++|+.|+|++|++++..+
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh
Confidence 9999985 444 8889999999999999987665
No 366
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.28 E-value=1.2e-11 Score=104.36 Aligned_cols=101 Identities=23% Similarity=0.276 Sum_probs=84.6
Q ss_pred cCeeeccccccCCc------ccCeEEcCCCcccccCCccccCCCccceecccccccccCCCccccCCCCCCeEeCcCCcc
Q 040294 29 LRNLHLDSNELRHL------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNL 102 (360)
Q Consensus 29 L~~L~l~~N~l~~~------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l 102 (360)
-+.+++++|.++.+ .|+.|+|++|+|++.+|..|+++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l 93 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL 93 (174)
T ss_dssp SSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCcc
Confidence 47899999999875 589999999999999999999999999999999999976666789999999999999999
Q ss_pred CcccchhhhccccccccCCCCCCCCcccccccCCCCCCC
Q 040294 103 SEIIPLSLEKLLLEGEIPRGGPFTKFSSKSFIGNDLLCG 141 (360)
Q Consensus 103 ~~~~p~~l~~l~~~~~~p~~~~~~~~~~~~~~~n~~~cg 141 (360)
++..+..+..+ ..+....+.+|+..|.
T Consensus 94 ~~l~~~~~~~l------------~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 94 KSIPRGAFDNL------------KSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCTTTTTTC------------TTCSEEECCSSCBCTT
T ss_pred ceeCHHHhccc------------cCCCEEEeCCCCcccc
Confidence 98776555443 3445566677776554
No 367
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.28 E-value=8.1e-14 Score=120.05 Aligned_cols=101 Identities=26% Similarity=0.314 Sum_probs=47.4
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
++|+.|+|++|+|++ +| .+.++++|+.|++++|.++.+ .|+.|++++|++++ +| .++.+++|+.|+|+
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 344555555555543 33 444455555555555544432 24455555555544 22 34445555555555
Q ss_pred ccccccCCC-ccccCCCCCCeEeCcCCccCcccc
Q 040294 75 HNRLQGSIP-NSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 75 ~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|++++..+ ..+..+++|++|++++|++++.+|
T Consensus 124 ~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 124 NNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp EEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 555542111 244455555555555555544433
No 368
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.28 E-value=7.5e-12 Score=111.63 Aligned_cols=122 Identities=14% Similarity=0.105 Sum_probs=93.3
Q ss_pred ccCCCccEEEEEccCCcEEEehh--------hHHHHHHhhcCCCCC--eeEEEEEecCCCeEEEEEEccCCCCHHHHHhc
Q 040294 209 GRGSFGSVYKARLQDGMEFAIKS--------FDVECEVMKSIHHRN--LVKIISSCSNEDFRALVLEYMTNGSLEKVLYS 278 (360)
Q Consensus 209 G~G~~g~Vy~~~~~~~~~vavK~--------~~~E~~~l~~l~hpn--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 278 (360)
+.|..+.||+....+|..+++|. +..|+++++.+.+.+ +.++++++..++..++||||++|.++. ...
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~ 106 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH 106 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc
Confidence 35566999999877788898883 468999998886544 556888888888889999999998884 211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhhcC----------------------------------------------------
Q 040294 279 SNCILDILQRLNIMINVTSALEYLHFGF---------------------------------------------------- 306 (360)
Q Consensus 279 ~~~~~~~~~~~~i~~~i~~~l~yLH~~~---------------------------------------------------- 306 (360)
.+ ...++.++++.+..||...
T Consensus 107 ----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 179 (264)
T 1nd4_A 107 ----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMP 179 (264)
T ss_dssp ----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCC
T ss_pred ----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcC
Confidence 11 2356778888888888421
Q ss_pred ---CCCeEEccCCCCceeecCCCcEEEeeccccccc
Q 040294 307 ---STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKLL 339 (360)
Q Consensus 307 ---~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~~ 339 (360)
...++|+|++|.||+++++..+.|+|||.+...
T Consensus 180 ~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 180 DGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp SSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred CCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 112999999999999988766789999998753
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.26 E-value=1.5e-11 Score=123.52 Aligned_cols=98 Identities=29% Similarity=0.435 Sum_probs=85.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|+|++|+|++ +| .|..+++|+.|+|++|.++.+ .|+.|+|++|++++. ..++.+++|+.|+|+
T Consensus 86 l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls 161 (605)
T 1m9s_A 86 LKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLE 161 (605)
T ss_dssp CTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCCGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECC
T ss_pred CCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCCccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECc
Confidence 6789999999999985 44 789999999999999998875 588999999999875 678899999999999
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
+|+|++..| +..+++|+.|+|++|+|++.
T Consensus 162 ~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 162 DNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred CCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 999997666 88999999999999999875
No 370
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.26 E-value=6.7e-12 Score=117.10 Aligned_cols=102 Identities=25% Similarity=0.399 Sum_probs=92.9
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|+|++|++++..+ +..+++|+.|++++|.++.+ .|+.|++++|++++. +.+..+++|+.|+|+
T Consensus 220 ~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~ 295 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLN 295 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECC
T ss_pred CCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECc
Confidence 5789999999999996443 89999999999999998874 589999999999875 468999999999999
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|++++..|..|..+++|+.|+|++|++++..|
T Consensus 296 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 296 NNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp SSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 999998889999999999999999999999877
No 371
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.24 E-value=1.9e-11 Score=121.71 Aligned_cols=89 Identities=37% Similarity=0.509 Sum_probs=44.9
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-----ccCeEEcCCCcccccCCccccCCCccceecccccc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-----VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNR 77 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-----~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 77 (360)
++|+.|+|++|+|++ +|. |.+ +|+.|+|++|.|+++ .|+.|++++|+|++ +|. .+++|+.|+|++|+
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPELPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCCcCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 445555555555554 444 333 455555555555443 24555555555554 333 34455555555555
Q ss_pred cccCCCccccCCCCCCeEeCcCCccC
Q 040294 78 LQGSIPNSFDDLVSLESLDLSNNNLS 103 (360)
Q Consensus 78 l~g~~p~~~~~l~~L~~l~ls~N~l~ 103 (360)
|++ +|. |. ++|+.|+|++|+|+
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC
Confidence 553 444 43 55555555555555
No 372
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.24 E-value=4.4e-11 Score=116.32 Aligned_cols=97 Identities=28% Similarity=0.298 Sum_probs=52.1
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeecccc----------------------ccCCc------ccCeEEcCCCc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSN----------------------ELRHL------VLTRTDFSRNN 53 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N----------------------~l~~~------~L~~l~l~~N~ 53 (360)
+++|+.|+|++|+|++. | ++++++|+.|++++| +++++ .|+.|++++|+
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNN 202 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSC
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccceeccccCCCCCEEECcCCc
Confidence 46677777777777753 2 555555555555555 33332 24444444444
Q ss_pred ccccCCccccCCCccceecccccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 54 LLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 54 l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+++. .++.+++|+.|+|++|++++ +| ++.+++|+.|++++|+|++..+
T Consensus 203 l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 203 ITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred CCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 4442 24455555555555555554 34 5555555555555555555443
No 373
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.24 E-value=1e-11 Score=123.87 Aligned_cols=95 Identities=24% Similarity=0.265 Sum_probs=85.2
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccC-CccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDI-PTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~-p~~~~~l~~L~~L~l 73 (360)
+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|.|+++ .|+.|+|++|+|++.+ |..++.+++|+.|+|
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L 540 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNL 540 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEEC
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCCcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEe
Confidence 678999999999999 8899999999999999999999875 5899999999999987 999999999999999
Q ss_pred cccccccCCCcc---ccCCCCCCeEeC
Q 040294 74 GHNRLQGSIPNS---FDDLVSLESLDL 97 (360)
Q Consensus 74 ~~N~l~g~~p~~---~~~l~~L~~l~l 97 (360)
++|+|++.+|.. +..+++|+.|||
T Consensus 541 ~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 541 QGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp TTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred cCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999765532 344889999875
No 374
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.23 E-value=5.9e-11 Score=115.30 Aligned_cols=93 Identities=30% Similarity=0.397 Sum_probs=69.2
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-----ccCeEEcCCCcccccCCccccCCCccceecccccc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-----VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNR 77 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-----~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 77 (360)
++|+.|+|++|++++ +| .|+++++|+.|++++|+++++ .|+.|++++|++++ +| .++++++|+.|++++|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~ 206 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNS 206 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCc
Confidence 478888888888886 77 588999999999999988875 58888999998887 56 58888888888887777
Q ss_pred cccCCCccccCCCCCCeEeCcCCccC
Q 040294 78 LQGSIPNSFDDLVSLESLDLSNNNLS 103 (360)
Q Consensus 78 l~g~~p~~~~~l~~L~~l~ls~N~l~ 103 (360)
+++ +|... ++|++|++++|+++
T Consensus 207 l~~-l~~~~---~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 207 LKK-LPDLP---LSLESIVAGNNILE 228 (454)
T ss_dssp CSS-CCCCC---TTCCEEECCSSCCS
T ss_pred CCc-CCCCc---CcccEEECcCCcCC
Confidence 774 34322 24555555555554
No 375
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.22 E-value=3.6e-11 Score=116.89 Aligned_cols=100 Identities=27% Similarity=0.310 Sum_probs=82.9
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
+++|+.|+|++|+|++ +| +..+++|+.|++++|.++++ .|+.|++++|++++ +| ++.+++|+.|++++
T Consensus 169 l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~ 242 (457)
T 3bz5_A 169 QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSV 242 (457)
T ss_dssp CTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCS
T ss_pred CCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeC
Confidence 5789999999999997 55 88999999999999999875 58899999999998 66 88999999999999
Q ss_pred cccccCCCccccCCC-------CCCeEeCcCCccCcccc
Q 040294 76 NRLQGSIPNSFDDLV-------SLESLDLSNNNLSEIIP 107 (360)
Q Consensus 76 N~l~g~~p~~~~~l~-------~L~~l~ls~N~l~~~~p 107 (360)
|++++..+..+.++. +|+.|++++|++.|.+|
T Consensus 243 N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 243 NPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp SCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE
T ss_pred CcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc
Confidence 999987655555554 55666667776666665
No 376
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.21 E-value=2.5e-11 Score=109.27 Aligned_cols=98 Identities=33% Similarity=0.499 Sum_probs=88.4
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
+++|+.|+|++|+|++..| +.++++|+.|+|++|+++++ .|+.|++++|++++. +.++.+++|+.|+|++
T Consensus 62 l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~~~~~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~ 137 (263)
T 1xeu_A 62 FTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGIPSACLSRLFLDNNELRDT--DSLIHLKNLEILSIRN 137 (263)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTTCCCSSCCEEECCSSCCSBS--GGGTTCTTCCEEECTT
T ss_pred CCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCccccCcccEEEccCCccCCC--hhhcCcccccEEECCC
Confidence 6789999999999996544 99999999999999999875 589999999999973 4699999999999999
Q ss_pred cccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 76 NRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 76 N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
|++++ +| .+..+++|+.|+|++|++++.
T Consensus 138 N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 138 NKLKS-IV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp SCCCB-CG-GGGGCTTCCEEECTTSCCCBC
T ss_pred CcCCC-Ch-HHccCCCCCEEECCCCcCcch
Confidence 99996 45 699999999999999999987
No 377
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.21 E-value=3.2e-11 Score=117.38 Aligned_cols=98 Identities=35% Similarity=0.540 Sum_probs=70.0
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|+|++|++++..| +..+++|+.|++++|.++++ .|+.|++++|++++..| ++.+++|+.|+|+
T Consensus 242 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 242 LTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLY 317 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECC
T ss_pred CCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECc
Confidence 5677888888888876544 77777788888888777654 46777777777776443 6677777777777
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
+|++++..| +..+++|+.|++++|++++.
T Consensus 318 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 318 FNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp SSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred CCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 777776544 66777777777777777765
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.20 E-value=3.7e-11 Score=116.96 Aligned_cols=100 Identities=36% Similarity=0.539 Sum_probs=86.2
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
+++|+.|+|++|++++ + +.+..+++|+.|++++|.++++ .|+.|++++|++++..| +..+++|+.|+|+
T Consensus 220 l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~ 295 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELN 295 (466)
T ss_dssp CTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECC
T ss_pred cCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcC
Confidence 5789999999999985 3 4688899999999999998874 58999999999987544 8899999999999
Q ss_pred ccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+|++++..| +..+++|+.|+|++|++++..|
T Consensus 296 ~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp SSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred CCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 999996544 8899999999999999998877
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.20 E-value=1.7e-11 Score=119.10 Aligned_cols=102 Identities=30% Similarity=0.358 Sum_probs=60.6
Q ss_pred cccCeeeccccccCCc-----ccCeEEcCCCcccccCCccccCCCccceecccccccccCCCccccCCCCCCeEeCcCCc
Q 040294 27 TALRNLHLDSNELRHL-----VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNN 101 (360)
Q Consensus 27 ~~L~~L~l~~N~l~~~-----~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~ 101 (360)
++|+.|++++|+++++ .|+.|++++|++++ +|.. +++|+.|+|++|+++ .+|. .+++|++|+|++|+
T Consensus 297 ~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~ 368 (454)
T 1jl5_A 297 PNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNP 368 (454)
T ss_dssp TTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSC
T ss_pred CcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCC
Confidence 3455566666655542 57788888888876 5654 588999999999998 5777 57899999999999
Q ss_pred cCc--ccchhhhccc---cccccCCCCCCCCcccccccCCCC
Q 040294 102 LSE--IIPLSLEKLL---LEGEIPRGGPFTKFSSKSFIGNDL 138 (360)
Q Consensus 102 l~~--~~p~~l~~l~---~~~~~p~~~~~~~~~~~~~~~n~~ 138 (360)
+++ .+|..+..+. +.|.+|.. ...+....+.+|..
T Consensus 369 l~~l~~ip~~l~~L~~n~~~~~i~~~--~~~L~~L~ls~N~l 408 (454)
T 1jl5_A 369 LREFPDIPESVEDLRMNSHLAEVPEL--PQNLKQLHVETNPL 408 (454)
T ss_dssp CSSCCCCCTTCCEEECCC------------------------
T ss_pred CCcCCCChHHHHhhhhcccccccccc--cCcCCEEECCCCcC
Confidence 999 7888776663 44555542 23344445555543
No 380
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.18 E-value=3.4e-11 Score=121.27 Aligned_cols=106 Identities=30% Similarity=0.373 Sum_probs=76.1
Q ss_pred CCCcEeeCCCCcccccCCccccC-----------------CcccCeeeccccccCCc-----ccCeEEcCCCcccccCCc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSN-----------------LTALRNLHLDSNELRHL-----VLTRTDFSRNNLLGDIPT 60 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~-----------------l~~L~~L~l~~N~l~~~-----~L~~l~l~~N~l~~~~p~ 60 (360)
++|+.|+|++|+|++ +|..+.+ +++|+.|+|++|.|+++ .|+.|++++|+|+ .+|.
T Consensus 181 ~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~lp~~l~~L~~L~Ls~N~L~-~lp~ 258 (622)
T 3g06_A 181 SGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNRLT-SLPM 258 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS-CCCC
T ss_pred CCCcEEECCCCCCCC-CCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCcCCCCCCcCcEEECCCCCCC-cCCc
Confidence 566677777777764 3332221 15566777777777664 4777777777777 3554
Q ss_pred cccCCCccceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhccc
Q 040294 61 TIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLL 114 (360)
Q Consensus 61 ~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l~ 114 (360)
.+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++.+|..+..+.
T Consensus 259 ---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 259 ---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 5678888888888888 7788888888899999999998888888776654
No 381
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.14 E-value=9e-13 Score=113.44 Aligned_cols=103 Identities=23% Similarity=0.328 Sum_probs=91.9
Q ss_pred CCCCcEeeCCCCcccccCCc------cccCCcccCeeeccccccCCc-------ccCeEEcCCCcccccCCccccCCCcc
Q 040294 2 LAALFQLDLRGNKLSGSIPT------CFSNLTALRNLHLDSNELRHL-------VLTRTDFSRNNLLGDIPTTIQGLKSL 68 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~------~~~~l~~L~~L~l~~N~l~~~-------~L~~l~l~~N~l~~~~p~~~~~l~~L 68 (360)
...++.++++.|.|+|.+|. .|.++++|+.|++++|.++.+ .|+.|++++|+++ .+|..+..+++|
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCccccccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 35788899999999999887 899999999999999999885 5899999999998 678888888999
Q ss_pred ceecccccccccCCCccccCCCCCCeEeCcCCccCcccc
Q 040294 69 QFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 107 (360)
Q Consensus 69 ~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p 107 (360)
+.|+|++|++++ +| .+..+++|+.|+|++|++++..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~ 132 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE 132 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH
Confidence 999999999996 56 68999999999999999987543
No 382
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.08 E-value=3.9e-10 Score=105.89 Aligned_cols=130 Identities=15% Similarity=0.237 Sum_probs=99.5
Q ss_pred CCeeccCCCccEEEEEccCCcEEEehh--------------hHHHHHHhhcCC--CCCeeEEEEEecCC---CeEEEEEE
Q 040294 205 NNLIGRGSFGSVYKARLQDGMEFAIKS--------------FDVECEVMKSIH--HRNLVKIISSCSNE---DFRALVLE 265 (360)
Q Consensus 205 ~~~iG~G~~g~Vy~~~~~~~~~vavK~--------------~~~E~~~l~~l~--hpniv~l~~~~~~~---~~~~lv~e 265 (360)
.+.++.|.++.||+.+..+ ..+++|. +..|.++++.+. +..+++++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4678899999999988765 4555542 345888888887 45678899998876 35799999
Q ss_pred ccCCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC---------------------------------------
Q 040294 266 YMTNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGF--------------------------------------- 306 (360)
Q Consensus 266 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~--------------------------------------- 306 (360)
|++|..+.+.. ...++..++..++.++++.|+.||...
T Consensus 122 ~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 99998774321 123567778889999999999999520
Q ss_pred ----------------CCCeEEccCCCCceeecCCCc--EEEeecccccc
Q 040294 307 ----------------STPIIHCDLKPHNVLLDDNIV--AHLSDFGIAKL 338 (360)
Q Consensus 307 ----------------~~~iiHrdlk~~NiLl~~~~~--~ki~DFGla~~ 338 (360)
...++|+|+++.||+++.++. +.|.||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997653 68999998865
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.07 E-value=2.1e-11 Score=113.11 Aligned_cols=99 Identities=19% Similarity=0.246 Sum_probs=61.5
Q ss_pred CCCCcEeeCCCCccccc-CCccccCCcccCeeeccccccCC---------cccCeEEcCCC-cccc-cCCccccCCCccc
Q 040294 2 LAALFQLDLRGNKLSGS-IPTCFSNLTALRNLHLDSNELRH---------LVLTRTDFSRN-NLLG-DIPTTIQGLKSLQ 69 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~-~p~~~~~l~~L~~L~l~~N~l~~---------~~L~~l~l~~N-~l~~-~~p~~~~~l~~L~ 69 (360)
+++|+.|+|++|.+++. +|..+..+++|+.|++++|.++. -.|+.|++++| .+++ .+|..+.++++|+
T Consensus 92 ~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~ 171 (336)
T 2ast_B 92 PFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 171 (336)
T ss_dssp CBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCC
Confidence 45666777777766654 56566666677777777666553 14666666666 4554 2455566666666
Q ss_pred eeccccc-ccccC-CCccccCCC-CCCeEeCcCC
Q 040294 70 FLSLGHN-RLQGS-IPNSFDDLV-SLESLDLSNN 100 (360)
Q Consensus 70 ~L~l~~N-~l~g~-~p~~~~~l~-~L~~l~ls~N 100 (360)
+|+|++| .+++. +|..+..++ +|++|+|++|
T Consensus 172 ~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 172 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred EEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 6666666 66543 455566666 6666666666
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.05 E-value=2.6e-11 Score=115.05 Aligned_cols=38 Identities=26% Similarity=0.495 Sum_probs=17.9
Q ss_pred Cccceecccccccc-cCCC---ccccCCCCCCeEeCcCCccC
Q 040294 66 KSLQFLSLGHNRLQ-GSIP---NSFDDLVSLESLDLSNNNLS 103 (360)
Q Consensus 66 ~~L~~L~l~~N~l~-g~~p---~~~~~l~~L~~l~ls~N~l~ 103 (360)
++|+.|+|++|+++ +.+| ..|..+++|++|+|++|+++
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIR 200 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCC
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 45555555555554 2233 23444445555555555444
No 385
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.04 E-value=8e-10 Score=111.24 Aligned_cols=35 Identities=31% Similarity=0.373 Sum_probs=18.2
Q ss_pred CccceecccccccccCCCccccCCCCCCeEeCcCCccCc
Q 040294 66 KSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 66 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 104 (360)
++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~ 255 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS 255 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc
Confidence 445555555555553 44 233455555555555553
No 386
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.04 E-value=3.8e-10 Score=105.33 Aligned_cols=84 Identities=24% Similarity=0.250 Sum_probs=73.6
Q ss_pred Ceeecccc-ccCCc-------ccCeEEcCC-CcccccCCccccCCCccceecccccccccCCCccccCCCCCCeEeCcCC
Q 040294 30 RNLHLDSN-ELRHL-------VLTRTDFSR-NNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNN 100 (360)
Q Consensus 30 ~~L~l~~N-~l~~~-------~L~~l~l~~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N 100 (360)
..++.+++ .|+.+ .|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++..|..|.+|++|+.|||++|
T Consensus 11 ~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp SCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred CEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 35677777 77664 489999996 9999998899999999999999999999999999999999999999999
Q ss_pred ccCcccchhhhcc
Q 040294 101 NLSEIIPLSLEKL 113 (360)
Q Consensus 101 ~l~~~~p~~l~~l 113 (360)
+|+++.|..+..+
T Consensus 91 ~l~~~~~~~~~~~ 103 (347)
T 2ifg_A 91 ALESLSWKTVQGL 103 (347)
T ss_dssp CCSCCCSTTTCSC
T ss_pred ccceeCHHHcccC
Confidence 9998877665543
No 387
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.01 E-value=3.9e-10 Score=105.57 Aligned_cols=64 Identities=20% Similarity=0.281 Sum_probs=34.7
Q ss_pred CeEEcCCCcccccCCccccCCCccceecccc-cccccCCC-ccccCCCCCCeEeCcCCccCcccchhh
Q 040294 45 TRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH-NRLQGSIP-NSFDDLVSLESLDLSNNNLSEIIPLSL 110 (360)
Q Consensus 45 ~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~~p~~l 110 (360)
+.|++++|+|+. +|..+....+|+.|++++ |.++ .+| +.|..+++|+.|||++|+|+.+.+..+
T Consensus 157 ~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~ 222 (350)
T 4ay9_X 157 VILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSYGL 222 (350)
T ss_dssp EEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSSSC
T ss_pred hhhccccccccC-CChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChhhh
Confidence 345566666653 333333445566666653 4444 344 346666666666666666665544333
No 388
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.01 E-value=4.6e-11 Score=113.33 Aligned_cols=61 Identities=20% Similarity=0.287 Sum_probs=27.6
Q ss_pred cCeEEcCCCccc--c---cCCccccCCCccceecccccccc----cCCCccccCCCCCCeEeCcCCccCc
Q 040294 44 LTRTDFSRNNLL--G---DIPTTIQGLKSLQFLSLGHNRLQ----GSIPNSFDDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 44 L~~l~l~~N~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~l~ls~N~l~~ 104 (360)
|+.|++++|+++ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++
T Consensus 189 L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 189 LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred cCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 444444444444 1 22224444444444444444443 3344444444444444444444443
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.00 E-value=2.8e-10 Score=106.60 Aligned_cols=97 Identities=21% Similarity=0.194 Sum_probs=62.9
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc----------ccC-eEEcCCCcccccCCccccCCCcccee
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL----------VLT-RTDFSRNNLLGDIPTTIQGLKSLQFL 71 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~----------~L~-~l~l~~N~l~~~~p~~~~~l~~L~~L 71 (360)
++++.|+|++|+|+...+..|.++++|+.|+|++|++.+. .+. .+.+++|+++...|..|..+++|+.|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 4577788888888754445677788888888887776431 122 35556677777667777777777777
Q ss_pred cccccccccCCCccccCCCCCCeEeCcC
Q 040294 72 SLGHNRLQGSIPNSFDDLVSLESLDLSN 99 (360)
Q Consensus 72 ~l~~N~l~g~~p~~~~~l~~L~~l~ls~ 99 (360)
++++|++++..+..+....++..|++++
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred cccccccccCCchhhcccchhhhhhhcc
Confidence 7777777755444454444555555533
No 390
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.99 E-value=1.3e-10 Score=109.31 Aligned_cols=104 Identities=25% Similarity=0.317 Sum_probs=73.1
Q ss_pred CCCcEeeCCCCcccccCC----ccccCCc-ccCeeeccccccCC--------------cccCeEEcCCCcccccCCcccc
Q 040294 3 AALFQLDLRGNKLSGSIP----TCFSNLT-ALRNLHLDSNELRH--------------LVLTRTDFSRNNLLGDIPTTIQ 63 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p----~~~~~l~-~L~~L~l~~N~l~~--------------~~L~~l~l~~N~l~~~~p~~~~ 63 (360)
++|+.|+|++|+|++..+ ..|..++ +|+.|+|++|.++. -.|+.|++++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 347888888888876555 5667777 78888888887765 2477888888888776666443
Q ss_pred C----C-CccceecccccccccCCCcccc----C-CCCCCeEeCcCCccCccc
Q 040294 64 G----L-KSLQFLSLGHNRLQGSIPNSFD----D-LVSLESLDLSNNNLSEII 106 (360)
Q Consensus 64 ~----l-~~L~~L~l~~N~l~g~~p~~~~----~-l~~L~~l~ls~N~l~~~~ 106 (360)
. + ++|+.|+|++|++++..+..+. . .++|++|+|++|+++...
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 154 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKS 154 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSC
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHH
Confidence 3 3 7788888888888765554433 3 257888888888877543
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.98 E-value=1.2e-10 Score=109.69 Aligned_cols=110 Identities=22% Similarity=0.263 Sum_probs=85.7
Q ss_pred CC-CCcEeeCCCCcccccCCccccCC-----cccCeeeccccccCC--------------cccCeEEcCCCcccccCCcc
Q 040294 2 LA-ALFQLDLRGNKLSGSIPTCFSNL-----TALRNLHLDSNELRH--------------LVLTRTDFSRNNLLGDIPTT 61 (360)
Q Consensus 2 l~-~L~~L~L~~N~l~g~~p~~~~~l-----~~L~~L~l~~N~l~~--------------~~L~~l~l~~N~l~~~~p~~ 61 (360)
++ +|+.|+|++|+|++..+..|..+ ++|+.|+|++|.++. -.|+.|++++|++++..+..
T Consensus 49 ~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~ 128 (362)
T 3goz_A 49 TPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSE 128 (362)
T ss_dssp CCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHH
T ss_pred CCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHH
Confidence 45 79999999999998777777765 899999999998874 15889999999998776665
Q ss_pred cc----C-CCccceecccccccccC----CCccccCCC-CCCeEeCcCCccCcccchhhh
Q 040294 62 IQ----G-LKSLQFLSLGHNRLQGS----IPNSFDDLV-SLESLDLSNNNLSEIIPLSLE 111 (360)
Q Consensus 62 ~~----~-l~~L~~L~l~~N~l~g~----~p~~~~~l~-~L~~l~ls~N~l~~~~p~~l~ 111 (360)
+. . .++|++|+|++|.+++. ++..+..+. +|++|+|++|++++..+..+.
T Consensus 129 l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 188 (362)
T 3goz_A 129 FKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELA 188 (362)
T ss_dssp HHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred HHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHH
Confidence 54 3 36899999999999853 334455565 899999999999887765443
No 392
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.96 E-value=1.5e-10 Score=107.33 Aligned_cols=107 Identities=13% Similarity=0.182 Sum_probs=89.3
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCC--c--------ccCeEEcCCCcccccCCccccCCCccceec
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRH--L--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~--~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
++++.|++++|.+++.++. +..+++|+.|++++|.++. + .|+.|++++|++++..|..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6788999999999976665 5679999999999998764 1 589999999999988888999999999999
Q ss_pred cccc-cccc-CCCccccCCCCCCeEeCcCC-ccCcc-cchhh
Q 040294 73 LGHN-RLQG-SIPNSFDDLVSLESLDLSNN-NLSEI-IPLSL 110 (360)
Q Consensus 73 l~~N-~l~g-~~p~~~~~l~~L~~l~ls~N-~l~~~-~p~~l 110 (360)
|++| .+++ .+|..+..+++|++|+|++| .+++. ++..+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~ 190 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAV 190 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHH
Confidence 9999 6875 37777889999999999999 88864 44433
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.89 E-value=1.4e-10 Score=112.14 Aligned_cols=103 Identities=22% Similarity=0.206 Sum_probs=48.2
Q ss_pred CCCcEeeCCCCcccccC-----CccccCCcccCeeeccccccCC-----c--------ccCeEEcCCCcccccCCccccC
Q 040294 3 AALFQLDLRGNKLSGSI-----PTCFSNLTALRNLHLDSNELRH-----L--------VLTRTDFSRNNLLGDIPTTIQG 64 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~-----p~~~~~l~~L~~L~l~~N~l~~-----~--------~L~~l~l~~N~l~~~~p~~~~~ 64 (360)
++|+.|+|++|.++..- +..+..+++|+.|++++|.++. + .|+.|++++|.++...+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 45555555555554321 1112235555555555555543 1 3555555555554332222221
Q ss_pred -----CCccceecccccccccC----CCccccCCCCCCeEeCcCCccCcc
Q 040294 65 -----LKSLQFLSLGHNRLQGS----IPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 65 -----l~~L~~L~l~~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
.++|+.|+|++|.+++. +|..+..+++|++|+|++|++++.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 13555555555555433 334444445555555555555443
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.76 E-value=5.6e-10 Score=107.93 Aligned_cols=112 Identities=17% Similarity=0.146 Sum_probs=92.0
Q ss_pred CCCCcEeeCCCCccccc----CCccccCCcccCeeeccccccCC--------------cccCeEEcCCCccccc----CC
Q 040294 2 LAALFQLDLRGNKLSGS----IPTCFSNLTALRNLHLDSNELRH--------------LVLTRTDFSRNNLLGD----IP 59 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~--------------~~L~~l~l~~N~l~~~----~p 59 (360)
+++|+.|+|++|+++.. ++..+.++++|+.|++++|.++. ..|+.|++++|.+++. +|
T Consensus 255 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 255 SSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp TCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred CCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 57899999999999964 67778889999999999998863 1689999999999876 56
Q ss_pred ccccCCCccceecccccccccCCCccccC-----CCCCCeEeCcCCccCc----ccchhhhcc
Q 040294 60 TTIQGLKSLQFLSLGHNRLQGSIPNSFDD-----LVSLESLDLSNNNLSE----IIPLSLEKL 113 (360)
Q Consensus 60 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~-----l~~L~~l~ls~N~l~~----~~p~~l~~l 113 (360)
..+..+++|+.|+|++|++++..+..+.. .++|++|+|++|++++ .+|..+..+
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 397 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLAN 397 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHC
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhC
Confidence 77788899999999999998655554443 6799999999999986 667665543
No 395
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.66 E-value=5.5e-08 Score=89.77 Aligned_cols=127 Identities=15% Similarity=0.249 Sum_probs=92.1
Q ss_pred CCCCCCeeccCCCccEEEEEccCCcEEEeh---------hhHHHHHHhhcCCC----CCeeEEEEEecCCCeEEEEEEcc
Q 040294 201 GFSANNLIGRGSFGSVYKARLQDGMEFAIK---------SFDVECEVMKSIHH----RNLVKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 201 ~f~~~~~iG~G~~g~Vy~~~~~~~~~vavK---------~~~~E~~~l~~l~h----pniv~l~~~~~~~~~~~lv~e~~ 267 (360)
.....+.++.|....||+. +..+++| .+..|.++++.+.+ ..+.+++++ +..++||||+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i 109 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYI 109 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeec
Confidence 4555678999999999987 5567776 35678888887765 223455554 4568999999
Q ss_pred CCCCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----------------------------------------
Q 040294 268 TNGSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGF----------------------------------------- 306 (360)
Q Consensus 268 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~----------------------------------------- 306 (360)
+|.++...... .++..++..++.++++.++.||...
T Consensus 110 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 110 KGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp CCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred CCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 99888643321 2455566677777777777777321
Q ss_pred -------------------CCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 307 -------------------STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 307 -------------------~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
...++|+|+++.||+++++..+.|.||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999876679999999865
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.66 E-value=1.4e-09 Score=102.81 Aligned_cols=103 Identities=23% Similarity=0.249 Sum_probs=79.2
Q ss_pred CCCcEeeCCCCcccccCCccc-cCCcccCeeeccccccCC--------------cccCeEEcCCCcccc----cCCcccc
Q 040294 3 AALFQLDLRGNKLSGSIPTCF-SNLTALRNLHLDSNELRH--------------LVLTRTDFSRNNLLG----DIPTTIQ 63 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~-~~l~~L~~L~l~~N~l~~--------------~~L~~l~l~~N~l~~----~~p~~~~ 63 (360)
++|+.|+|++|.|+..-...+ ..+++|+.|+|++|.|+. ..|+.|+|++|.|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 578999999999875433333 356789999999998864 148899999999864 3445557
Q ss_pred CCCccceeccccccccc----CCCccccCCCCCCeEeCcCCccCcc
Q 040294 64 GLKSLQFLSLGHNRLQG----SIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 64 ~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
.+++|++|+|++|.|+. .++..+...++|++|+|++|.++..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~ 226 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDT 226 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHH
Confidence 78889999999999874 2356677888999999999998764
No 397
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=1.3e-07 Score=87.48 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=69.4
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcc------------------
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNL------------------ 54 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l------------------ 54 (360)
+++|+.|+|++ .++..-+..|.+|++|+.|++++|.+..+ .+..+.+..+..
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 67889999988 88865566799999999999998876432 122222211100
Q ss_pred c--------ccCCcc---------------------------c-cCCCccceecccccccccCCCccccCCCCCCeEeCc
Q 040294 55 L--------GDIPTT---------------------------I-QGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLS 98 (360)
Q Consensus 55 ~--------~~~p~~---------------------------~-~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls 98 (360)
. +.+|.. + ..+++|+.|+|++|+++...+..|.++++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 0 000000 0 026778888888888875445568888888888888
Q ss_pred CCccCcccchhhhccc
Q 040294 99 NNNLSEIIPLSLEKLL 114 (360)
Q Consensus 99 ~N~l~~~~p~~l~~l~ 114 (360)
+| ++.+-+.++..+.
T Consensus 259 ~n-i~~I~~~aF~~~~ 273 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCG 273 (329)
T ss_dssp TT-CCEECTTTTTTCT
T ss_pred cc-cceehHHHhhCCh
Confidence 87 6666556666554
No 398
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.56 E-value=1.3e-07 Score=86.45 Aligned_cols=128 Identities=20% Similarity=0.285 Sum_probs=91.3
Q ss_pred CCeeccCCCccEEEEEccCCcEEEeh---------hhHHHHHHhhcCC-CCC--eeEEEEEecCCC---eEEEEEEccCC
Q 040294 205 NNLIGRGSFGSVYKARLQDGMEFAIK---------SFDVECEVMKSIH-HRN--LVKIISSCSNED---FRALVLEYMTN 269 (360)
Q Consensus 205 ~~~iG~G~~g~Vy~~~~~~~~~vavK---------~~~~E~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lv~e~~~~ 269 (360)
.+.++.|.+..||+.. ..+++| .+..|.++++.+. +.. +.+++......+ ..|+||||++|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 4568999999999753 346665 3567999888773 322 445666654443 35899999999
Q ss_pred CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------------
Q 040294 270 GSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFG-------------------------------------------- 305 (360)
Q Consensus 270 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~-------------------------------------------- 305 (360)
.++...... .++..++..++.++++.++.||..
T Consensus 101 ~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (304)
T 3sg8_A 101 VPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFY 177 (304)
T ss_dssp EECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred eECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence 887653321 245666777888888888888841
Q ss_pred -----------CCCCeEEccCCCCceeecC--CCcEEEeeccccccc
Q 040294 306 -----------FSTPIIHCDLKPHNVLLDD--NIVAHLSDFGIAKLL 339 (360)
Q Consensus 306 -----------~~~~iiHrdlk~~NiLl~~--~~~~ki~DFGla~~~ 339 (360)
....++|+|+++.||++++ +..+.|.||+.+..-
T Consensus 178 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 178 RDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1245799999999999998 566789999998753
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.56 E-value=3.4e-08 Score=88.58 Aligned_cols=85 Identities=28% Similarity=0.411 Sum_probs=62.0
Q ss_pred eeCCCCccc---ccCCccccCCcccCeeeccccccCCcccCeEEcCCCcccccCCccccCCCccceecccccccccCCCc
Q 040294 8 LDLRGNKLS---GSIPTCFSNLTALRNLHLDSNELRHLVLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN 84 (360)
Q Consensus 8 L~L~~N~l~---g~~p~~~~~l~~L~~L~l~~N~l~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~~p~ 84 (360)
++++.|+.. +.++-...++++|+.|+|++|+|+++. .+|..+..+++|+.|+|++|+|++. .
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~-------------~l~~~~~~l~~L~~L~Ls~N~i~~~--~ 212 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLD-------------DMSSIVQKAPNLKILNLSGNELKSE--R 212 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCG-------------GGTTHHHHSTTCCEEECTTSCCCSG--G
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCc-------------cchhHHhhCCCCCEEECCCCccCCc--h
Confidence 677888533 222222356788888888888776542 3567778899999999999999864 3
Q ss_pred cccCCC--CCCeEeCcCCccCcccc
Q 040294 85 SFDDLV--SLESLDLSNNNLSEIIP 107 (360)
Q Consensus 85 ~~~~l~--~L~~l~ls~N~l~~~~p 107 (360)
++..+. +|++|+|++|++++.+|
T Consensus 213 ~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 213 ELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhhhcccCCcceEEccCCcCccccC
Confidence 455555 89999999999998776
No 400
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.51 E-value=2.1e-08 Score=85.13 Aligned_cols=102 Identities=14% Similarity=0.154 Sum_probs=79.0
Q ss_pred CCCCcEeeCCCC-ccccc----CCccccCCcccCeeeccccccCC-------------cccCeEEcCCCccccc----CC
Q 040294 2 LAALFQLDLRGN-KLSGS----IPTCFSNLTALRNLHLDSNELRH-------------LVLTRTDFSRNNLLGD----IP 59 (360)
Q Consensus 2 l~~L~~L~L~~N-~l~g~----~p~~~~~l~~L~~L~l~~N~l~~-------------~~L~~l~l~~N~l~~~----~p 59 (360)
.++|+.|+|++| .|... +...+...++|+.|+|++|.+.. ..|+.|+|++|.|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 467999999999 88632 34456778899999999999864 1589999999998753 45
Q ss_pred ccccCCCccceecc--cccccccC----CCccccCCCCCCeEeCcCCccC
Q 040294 60 TTIQGLKSLQFLSL--GHNRLQGS----IPNSFDDLVSLESLDLSNNNLS 103 (360)
Q Consensus 60 ~~~~~l~~L~~L~l--~~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~ 103 (360)
..+...++|++|+| ++|.++.. +-..+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777888999999 88998742 3345666689999999999875
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=1.6e-08 Score=90.66 Aligned_cols=59 Identities=24% Similarity=0.278 Sum_probs=43.9
Q ss_pred EEcCCCcc---cccCCccccCCCccceeccccccccc--CCCccccCCCCCCeEeCcCCccCcc
Q 040294 47 TDFSRNNL---LGDIPTTIQGLKSLQFLSLGHNRLQG--SIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 47 l~l~~N~l---~~~~p~~~~~l~~L~~L~l~~N~l~g--~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
++++.|+. .+.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++.
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc
Confidence 55666632 22222223568899999999999997 5667788899999999999999876
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.49 E-value=7.7e-09 Score=97.68 Aligned_cols=103 Identities=20% Similarity=0.229 Sum_probs=81.6
Q ss_pred CCCcEeeCCCCcccccCCccccC-----CcccCeeeccccccCCc----------ccCeEEcCCCcccccCCccc-----
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSN-----LTALRNLHLDSNELRHL----------VLTRTDFSRNNLLGDIPTTI----- 62 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~-----l~~L~~L~l~~N~l~~~----------~L~~l~l~~N~l~~~~p~~~----- 62 (360)
+.|+.|+|++|.|+......|.. .++|+.|+|++|.++.. .|+.|+|++|+++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 57999999999998654444433 37999999999999741 58999999999976544444
Q ss_pred cCCCccceeccccccccc----CCCccccCCCCCCeEeCcCCccCcc
Q 040294 63 QGLKSLQFLSLGHNRLQG----SIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 63 ~~l~~L~~L~l~~N~l~g----~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
...++|+.|+|++|.|+. .++..+..+++|++|||++|.|+..
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~ 198 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDE 198 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcH
Confidence 356889999999999974 3556668899999999999998753
No 403
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.45 E-value=2.7e-07 Score=85.33 Aligned_cols=95 Identities=14% Similarity=0.116 Sum_probs=64.2
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCcccCeEEcCCCcccccCCccccCCCccc-eeccccccccc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHLVLTRTDFSRNNLLGDIPTTIQGLKSLQ-FLSLGHNRLQG 80 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~-~L~l~~N~l~g 80 (360)
+++|+.|+|++|+++...+..|.+|++|+.|+|++| ++.+ -+.+|.+|.+|+ .++|.+ .++.
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I---------------~~~aF~~~~~L~~~l~l~~-~l~~ 287 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTI---------------GQRVFSNCGRLAGTLELPA-SVTA 287 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEE---------------CTTTTTTCTTCCEEEEECT-TCCE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-ccee---------------hHHHhhCChhccEEEEEcc-cceE
Confidence 578899999999998655567899999999988876 4332 244566666666 666665 5553
Q ss_pred CCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 81 SIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 81 ~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
.-+..|.++++|+.|++++|+++.+-+.++..+
T Consensus 288 I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 288 IEFGAFMGCDNLRYVLATGDKITTLGDELFGNG 320 (329)
T ss_dssp ECTTTTTTCTTEEEEEECSSCCCEECTTTTCTT
T ss_pred EchhhhhCCccCCEEEeCCCccCccchhhhcCC
Confidence 444666666666666666666666555555443
No 404
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.44 E-value=1.4e-06 Score=77.83 Aligned_cols=127 Identities=18% Similarity=0.137 Sum_probs=88.8
Q ss_pred eeccCCCc-cEEEEEcc-CCcEEEeh--------hhHHHHHHhhcCC-CCCeeEEEEEecCCCeEEEEEEccCCCCHHHH
Q 040294 207 LIGRGSFG-SVYKARLQ-DGMEFAIK--------SFDVECEVMKSIH-HRNLVKIISSCSNEDFRALVLEYMTNGSLEKV 275 (360)
Q Consensus 207 ~iG~G~~g-~Vy~~~~~-~~~~vavK--------~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~~~~g~L~~~ 275 (360)
.+..|..| .||+.... ++..+.+| .+..|...|+.+. +--+.++++++.+++..++|||+++|.++.+.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccccc
Confidence 34556555 58987754 45678887 3567888887764 33467888999988999999999999887765
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------------------
Q 040294 276 LYSSNCILDILQRLNIMINVTSALEYLHFG-------------------------------------------------- 305 (360)
Q Consensus 276 l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~-------------------------------------------------- 305 (360)
..... .....++.+++..|.-||..
T Consensus 111 ~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (272)
T 4gkh_A 111 LEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHK 185 (272)
T ss_dssp HHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHT
T ss_pred ccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHh
Confidence 43211 12233455555555555521
Q ss_pred -----CCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 306 -----FSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 306 -----~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
....++|+|+.+.||++++++.+-|.||+.+..
T Consensus 186 ~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 186 LLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 011379999999999999887778999998865
No 405
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.41 E-value=1.1e-06 Score=80.53 Aligned_cols=126 Identities=13% Similarity=0.178 Sum_probs=84.3
Q ss_pred CeeccCCCccEEEEEccCCcEEEeh---------hhHHHHHHhhcCCCC---CeeEEEEEec-CCCeEEEEEEccCCCCH
Q 040294 206 NLIGRGSFGSVYKARLQDGMEFAIK---------SFDVECEVMKSIHHR---NLVKIISSCS-NEDFRALVLEYMTNGSL 272 (360)
Q Consensus 206 ~~iG~G~~g~Vy~~~~~~~~~vavK---------~~~~E~~~l~~l~hp---niv~l~~~~~-~~~~~~lv~e~~~~g~L 272 (360)
+.++.|....||+. +..+++| .+..|.++++.+.+. .+.+.+.++. ..+..++||||++|..+
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l 100 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL 100 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred eecCCCcceeEEEE----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence 56788888889987 4556665 356799999988752 3556666664 45567899999999877
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhc-----------------------------------------------
Q 040294 273 EKVLYSSNCILDILQRLNIMINVTSALEYLHFG----------------------------------------------- 305 (360)
Q Consensus 273 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~----------------------------------------------- 305 (360)
...... .++..++..++.++++.|+.||..
T Consensus 101 ~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 177 (306)
T 3tdw_A 101 GEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQ 177 (306)
T ss_dssp HHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred chhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 653211 123333344444444444444421
Q ss_pred ----------CCCCeEEccCCCCceeecC---CCc-EEEeecccccc
Q 040294 306 ----------FSTPIIHCDLKPHNVLLDD---NIV-AHLSDFGIAKL 338 (360)
Q Consensus 306 ----------~~~~iiHrdlk~~NiLl~~---~~~-~ki~DFGla~~ 338 (360)
....++|+|+.+.||+++. ++. +.|.||+.+..
T Consensus 178 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 178 SYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2446799999999999987 455 48999998775
No 406
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.35 E-value=2e-06 Score=78.12 Aligned_cols=65 Identities=18% Similarity=0.243 Sum_probs=53.9
Q ss_pred CCCeeccCCCccEEEEEccCCcEEEehh-----------hHHHHHHhhcCCCC---CeeEEEEEecCCCeEEEEEEccCC
Q 040294 204 ANNLIGRGSFGSVYKARLQDGMEFAIKS-----------FDVECEVMKSIHHR---NLVKIISSCSNEDFRALVLEYMTN 269 (360)
Q Consensus 204 ~~~~iG~G~~g~Vy~~~~~~~~~vavK~-----------~~~E~~~l~~l~hp---niv~l~~~~~~~~~~~lv~e~~~~ 269 (360)
..+.++.|.++.||+++..+|+.++||. |..|++.|+.+++. .+++++++. ..++||||++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 3467999999999999988899999874 57899999999865 577888774 25899999999
Q ss_pred CCH
Q 040294 270 GSL 272 (360)
Q Consensus 270 g~L 272 (360)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 407
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.29 E-value=2.4e-07 Score=92.33 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=39.5
Q ss_pred CCCCcEeeCCCCccccc----CCccccCCcccCeeeccccccCCc-------------ccCeEEcCCCcccccCCccccC
Q 040294 2 LAALFQLDLRGNKLSGS----IPTCFSNLTALRNLHLDSNELRHL-------------VLTRTDFSRNNLLGDIPTTIQG 64 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~-------------~L~~l~l~~N~l~~~~p~~~~~ 64 (360)
+++|+.|+|++|.+++. ++..+.++++|+.|++++|.++++ .|+.|++++|.+.+ +|..+.+
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 45666666666666544 222344566666666666666521 36666666666554 3444444
Q ss_pred CCccceeccc
Q 040294 65 LKSLQFLSLG 74 (360)
Q Consensus 65 l~~L~~L~l~ 74 (360)
+++|+.|+++
T Consensus 242 ~~~L~~L~l~ 251 (592)
T 3ogk_B 242 AANLEEFCGG 251 (592)
T ss_dssp CTTCCEEEEC
T ss_pred hhHHHhhccc
Confidence 4444444443
No 408
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.27 E-value=5.2e-08 Score=97.14 Aligned_cols=103 Identities=16% Similarity=0.135 Sum_probs=64.9
Q ss_pred CCCCcEeeCCCCcccccCCccccCC--cccCeeeccccc-cCC----------cccCeEEcCCCccccc----CCccccC
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNL--TALRNLHLDSNE-LRH----------LVLTRTDFSRNNLLGD----IPTTIQG 64 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l--~~L~~L~l~~N~-l~~----------~~L~~l~l~~N~l~~~----~p~~~~~ 64 (360)
+++|+.|+|++|.+++..+..+... ++|+.|+|++|. ++. -.|+.|++++|.+++. ++..+..
T Consensus 111 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~ 190 (592)
T 3ogk_B 111 LRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH 190 (592)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH
T ss_pred CCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc
Confidence 4566777777776665555555443 337777776654 211 1477777777777655 3334456
Q ss_pred CCccceecccccccc----cCCCccccCCCCCCeEeCcCCccCc
Q 040294 65 LKSLQFLSLGHNRLQ----GSIPNSFDDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 65 l~~L~~L~l~~N~l~----g~~p~~~~~l~~L~~l~ls~N~l~~ 104 (360)
+++|+.|+|++|.++ +.++..+.++++|++|+|++|.+.+
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~ 234 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE 234 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH
Confidence 777777777777776 2344455667777888887777766
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.27 E-value=1.7e-06 Score=81.27 Aligned_cols=134 Identities=10% Similarity=0.156 Sum_probs=84.2
Q ss_pred CCCeeccCCCccEEEEEccCCcEEEeh------hhHHHHHHhhcCCCCC--eeEEEEEecCC-CeEEEEEEccCCCCHHH
Q 040294 204 ANNLIGRGSFGSVYKARLQDGMEFAIK------SFDVECEVMKSIHHRN--LVKIISSCSNE-DFRALVLEYMTNGSLEK 274 (360)
Q Consensus 204 ~~~~iG~G~~g~Vy~~~~~~~~~vavK------~~~~E~~~l~~l~hpn--iv~l~~~~~~~-~~~~lv~e~~~~g~L~~ 274 (360)
..+.++.|....+|+... ++..+++| .+..|..+++.+.... +.+++.++... +..++||||++|..+.+
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~~ 123 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQD 123 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCCHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETTT
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCchhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCccc
Confidence 346688899999998875 57788887 3678888888776433 45677776654 56899999999865531
Q ss_pred H------------------HhcCC----CC------------CCHHHH---------------------HHHHHHHHHHH
Q 040294 275 V------------------LYSSN----CI------------LDILQR---------------------LNIMINVTSAL 299 (360)
Q Consensus 275 ~------------------l~~~~----~~------------~~~~~~---------------------~~i~~~i~~~l 299 (360)
. |+... .. -.|... ......+..-.
T Consensus 124 l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 203 (362)
T 3ovc_A 124 LPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDELM 203 (362)
T ss_dssp SCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHH
Confidence 1 11110 00 011111 01111111222
Q ss_pred HHhhh-cCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 300 EYLHF-GFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 300 ~yLH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
+++.. ...+.++|+|+.+.||+++++..+.|.||+.+..
T Consensus 204 ~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 204 LWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 23321 1125689999999999998877788999998875
No 410
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=3.5e-06 Score=78.55 Aligned_cols=68 Identities=7% Similarity=0.081 Sum_probs=47.5
Q ss_pred Cee-ccCCCccEEEEEcc-------CCcEEEeh--------------hhHHHHHHhhcCCC---CCeeEEEEEecCC---
Q 040294 206 NLI-GRGSFGSVYKARLQ-------DGMEFAIK--------------SFDVECEVMKSIHH---RNLVKIISSCSNE--- 257 (360)
Q Consensus 206 ~~i-G~G~~g~Vy~~~~~-------~~~~vavK--------------~~~~E~~~l~~l~h---pniv~l~~~~~~~--- 257 (360)
+.| +.|....+|+.... ++..+++| .+..|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 77888899987654 24566665 24678888887752 3567788887665
Q ss_pred CeEEEEEEccCCCCHH
Q 040294 258 DFRALVLEYMTNGSLE 273 (360)
Q Consensus 258 ~~~~lv~e~~~~g~L~ 273 (360)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999986654
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.88 E-value=8.7e-07 Score=88.17 Aligned_cols=59 Identities=14% Similarity=0.042 Sum_probs=24.9
Q ss_pred cCeEEcCCCcccccCCccc-cCCCccceecccccccccCCCc-cccCCCCCCeEeCcCCcc
Q 040294 44 LTRTDFSRNNLLGDIPTTI-QGLKSLQFLSLGHNRLQGSIPN-SFDDLVSLESLDLSNNNL 102 (360)
Q Consensus 44 L~~l~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~g~~p~-~~~~l~~L~~l~ls~N~l 102 (360)
|+.|++++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+..+++|+.|+|++|++
T Consensus 458 L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 458 MEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred ccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 4444444444443322222 3344455555555544322111 223344455555555444
No 412
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.85 E-value=2.5e-06 Score=84.83 Aligned_cols=99 Identities=14% Similarity=0.114 Sum_probs=55.7
Q ss_pred CCCCcEeeCCCCcccccCCcccc-CCcccCeeecccc-ccCC----------cccCeEEcCCCcccccCCcccc----CC
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFS-NLTALRNLHLDSN-ELRH----------LVLTRTDFSRNNLLGDIPTTIQ----GL 65 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~-~l~~L~~L~l~~N-~l~~----------~~L~~l~l~~N~l~~~~p~~~~----~l 65 (360)
+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .++. -.|+.|++++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 34666677776666655555554 4666777777666 3322 1466777777766654443332 45
Q ss_pred Cccceecccccc--ccc-CCCccccCCCCCCeEeCcCC
Q 040294 66 KSLQFLSLGHNR--LQG-SIPNSFDDLVSLESLDLSNN 100 (360)
Q Consensus 66 ~~L~~L~l~~N~--l~g-~~p~~~~~l~~L~~l~ls~N 100 (360)
++|+.|+|++|. ++. .++.-+..+++|+.|+|++|
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 567777776665 210 01111234567777777766
No 413
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.85 E-value=2.4e-05 Score=72.08 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=28.8
Q ss_pred CCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 57899999999999998888999999998754
No 414
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=4.2e-05 Score=72.37 Aligned_cols=64 Identities=17% Similarity=0.208 Sum_probs=43.2
Q ss_pred CCeeccCCCccEEEEEcc-CCcEEEehh------------------hHHHHHHhhcCCC--C-CeeEEEEEecCCCeEEE
Q 040294 205 NNLIGRGSFGSVYKARLQ-DGMEFAIKS------------------FDVECEVMKSIHH--R-NLVKIISSCSNEDFRAL 262 (360)
Q Consensus 205 ~~~iG~G~~g~Vy~~~~~-~~~~vavK~------------------~~~E~~~l~~l~h--p-niv~l~~~~~~~~~~~l 262 (360)
.+.+|.|.++.||+++.. +++.++||. +..|.++++.+.. | .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 457899999999999754 467888872 2458888876642 3 344666553 334589
Q ss_pred EEEccCCC
Q 040294 263 VLEYMTNG 270 (360)
Q Consensus 263 v~e~~~~g 270 (360)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 415
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.75 E-value=2.9e-06 Score=79.56 Aligned_cols=100 Identities=22% Similarity=0.260 Sum_probs=68.7
Q ss_pred CCCCcEeeCCCCc-ccccCCccccCCcccCeeeccccccCC-----------cccCeEEcCC--Cccccc-----CCccc
Q 040294 2 LAALFQLDLRGNK-LSGSIPTCFSNLTALRNLHLDSNELRH-----------LVLTRTDFSR--NNLLGD-----IPTTI 62 (360)
Q Consensus 2 l~~L~~L~L~~N~-l~g~~p~~~~~l~~L~~L~l~~N~l~~-----------~~L~~l~l~~--N~l~~~-----~p~~~ 62 (360)
+++|+.|+|++|. + .++. +. +++|+.|+|..+.++. .+|+.|+|+. |...|. +...+
T Consensus 171 ~P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp CTTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 5789999999883 3 2443 43 7899999998887752 2588888753 332222 11122
Q ss_pred --cCCCccceecccccccccCCCcccc---CCCCCCeEeCcCCccCcc
Q 040294 63 --QGLKSLQFLSLGHNRLQGSIPNSFD---DLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 63 --~~l~~L~~L~l~~N~l~g~~p~~~~---~l~~L~~l~ls~N~l~~~ 105 (360)
+.+++|+.|+|.+|.+....+..+. .+++|++|||+.|.++..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 3578999999999988754333332 578999999999998874
No 416
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.74 E-value=0.00012 Score=69.45 Aligned_cols=70 Identities=10% Similarity=0.080 Sum_probs=35.8
Q ss_pred CCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc--------ccCeEEcCCCcccccCCccccCCCccceecccc
Q 040294 4 ALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL--------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGH 75 (360)
Q Consensus 4 ~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~--------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 75 (360)
+|+.+.|.. .++..-+..|.+|++|+.++|++|.++.+ .|+.+.+.+| ++..-..+|.+|.+|+.++|..
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 345555543 44433344566666666666666555432 3455555432 4433344555555565555554
No 417
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.71 E-value=0.00012 Score=67.02 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=85.0
Q ss_pred CCeeccCCCccEEEEEccCCcEEEeh--------hhHHHHHHhhcCC---CCCeeEEEEEecCCCeEEEEEEccCCCCHH
Q 040294 205 NNLIGRGSFGSVYKARLQDGMEFAIK--------SFDVECEVMKSIH---HRNLVKIISSCSNEDFRALVLEYMTNGSLE 273 (360)
Q Consensus 205 ~~~iG~G~~g~Vy~~~~~~~~~vavK--------~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~e~~~~g~L~ 273 (360)
.+.|+.|.+..+|+... ++..+++| .+..|.+.|+.+. ...+++++.++...+..++||||+++..+.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~ 119 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNK 119 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCC
Confidence 45688999999999886 45677887 3577888887764 356788888888888899999999987541
Q ss_pred --------H---HHhcCCC---------------------CCCHHHHH---HHHH----------------HHHHHH-HH
Q 040294 274 --------K---VLYSSNC---------------------ILDILQRL---NIMI----------------NVTSAL-EY 301 (360)
Q Consensus 274 --------~---~l~~~~~---------------------~~~~~~~~---~i~~----------------~i~~~l-~y 301 (360)
. .+|.... .-+|.... ++.. .++..+ ..
T Consensus 120 ~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~ 199 (312)
T 3jr1_A 120 QSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADT 199 (312)
T ss_dssp TTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 1 2232111 12454321 1111 111111 23
Q ss_pred hh-hcCCCCeEEccCCCCceeecCCCcEEEeecc
Q 040294 302 LH-FGFSTPIIHCDLKPHNVLLDDNIVAHLSDFG 334 (360)
Q Consensus 302 LH-~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFG 334 (360)
|. ....+.++|+|+.+.|++++.++ +.|.||.
T Consensus 200 L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 200 LSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred hccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 32 12357899999999999999887 8899984
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.69 E-value=1.1e-05 Score=68.24 Aligned_cols=84 Identities=14% Similarity=0.182 Sum_probs=67.4
Q ss_pred cccCCcccCeeecccc-ccCC-------------cccCeEEcCCCccccc----CCccccCCCccceecccccccccC--
Q 040294 22 CFSNLTALRNLHLDSN-ELRH-------------LVLTRTDFSRNNLLGD----IPTTIQGLKSLQFLSLGHNRLQGS-- 81 (360)
Q Consensus 22 ~~~~l~~L~~L~l~~N-~l~~-------------~~L~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~-- 81 (360)
.+...++|+.|+|++| .+.. ..|+.|+|++|++... +...+...++|++|+|++|.|+..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4567899999999999 8864 1589999999999642 334455678999999999999842
Q ss_pred --CCccccCCCCCCeEeC--cCCccCcc
Q 040294 82 --IPNSFDDLVSLESLDL--SNNNLSEI 105 (360)
Q Consensus 82 --~p~~~~~l~~L~~l~l--s~N~l~~~ 105 (360)
+...+...++|++|+| ++|.+...
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 4567888899999999 88998754
No 419
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.61 E-value=8.2e-05 Score=70.68 Aligned_cols=107 Identities=12% Similarity=0.150 Sum_probs=71.8
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCccc-----ccCCccccCCCc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLL-----GDIPTTIQGLKS 67 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~-----~~~p~~~~~l~~ 67 (360)
+++|+.++|+.| ++..-...|.+ ++|+.+.+. |.++.+ .|+.+++.+|.+. ..-+..|.+|.+
T Consensus 225 ~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~ 301 (401)
T 4fdw_A 225 TSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPK 301 (401)
T ss_dssp CTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTT
T ss_pred CCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCcc
Confidence 567888888875 55444456766 678888874 334322 5788888777664 234567888888
Q ss_pred cceecccccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 68 LQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 68 L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
|+.+.|. |.++-.-...|.++++|+.++|.+| ++.+-+.++..+
T Consensus 302 L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 302 LARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp CCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred CCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 9998888 4476444577888888998888655 554444444433
No 420
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.50 E-value=0.00036 Score=66.52 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=27.8
Q ss_pred CCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
...++|+|+++.||+++.++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 67899999999999998776 99999988765
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.32 E-value=0.0011 Score=59.48 Aligned_cols=65 Identities=18% Similarity=0.286 Sum_probs=48.6
Q ss_pred CCCCeeccCCCccEEEEEccCCcEEEehh-----------hHHHHHHhhcCCC---CCeeEEEEEecCCCeEEEEEEccC
Q 040294 203 SANNLIGRGSFGSVYKARLQDGMEFAIKS-----------FDVECEVMKSIHH---RNLVKIISSCSNEDFRALVLEYMT 268 (360)
Q Consensus 203 ~~~~~iG~G~~g~Vy~~~~~~~~~vavK~-----------~~~E~~~l~~l~h---pniv~l~~~~~~~~~~~lv~e~~~ 268 (360)
...+.+|.|..+.||+.+..+|+.|.+|. |..|++.|+.+.- --+.+++++.. -++||||++
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~~----~~lv~e~l~ 93 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWDD----RTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEET----TEEEEECCC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEeccC----ceEEEEeec
Confidence 33467899999999999999999999983 6789988877642 23455555532 378999998
Q ss_pred CCC
Q 040294 269 NGS 271 (360)
Q Consensus 269 ~g~ 271 (360)
++.
T Consensus 94 ~~~ 96 (288)
T 3f7w_A 94 ERP 96 (288)
T ss_dssp CCC
T ss_pred ccC
Confidence 764
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.31 E-value=0.00034 Score=55.33 Aligned_cols=58 Identities=26% Similarity=0.263 Sum_probs=44.9
Q ss_pred eEEcCCCccc-ccCCccccCCCccceecccccccccCCCccccCCCCCCeEeCcCCccCcc
Q 040294 46 RTDFSRNNLL-GDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 105 (360)
Q Consensus 46 ~l~l~~N~l~-~~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 105 (360)
.++.++++|+ ..+|..+ -.+|+.|+|++|+|+...+..|..+++|+.|+|++|++.-.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 5666777775 3556543 24699999999999966667789999999999999988643
No 423
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.23 E-value=0.0011 Score=60.87 Aligned_cols=32 Identities=28% Similarity=0.338 Sum_probs=27.9
Q ss_pred CCCeEEccCCCCceeecCC----CcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDN----IVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~----~~~ki~DFGla~~ 338 (360)
...++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 5679999999999999874 6899999998765
No 424
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.14 E-value=0.00026 Score=66.24 Aligned_cols=107 Identities=16% Similarity=0.171 Sum_probs=72.1
Q ss_pred CCCCcEeeCCCCccc---------ccCCccccCCcccCeeeccccc-cC-----CcccCeEEcCCCcccccCCcccc--C
Q 040294 2 LAALFQLDLRGNKLS---------GSIPTCFSNLTALRNLHLDSNE-LR-----HLVLTRTDFSRNNLLGDIPTTIQ--G 64 (360)
Q Consensus 2 l~~L~~L~L~~N~l~---------g~~p~~~~~l~~L~~L~l~~N~-l~-----~~~L~~l~l~~N~l~~~~p~~~~--~ 64 (360)
+++|+.|.+..+... +.++..+..+++|+.|+|++|. ++ ..+|+.|+|..+.+....-..+. .
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~l~~~~~~~L~~L~L~~~~l~~~~l~~l~~~~ 217 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSD 217 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCBCCSCBCTTCSEEEEECSBCCHHHHHHHHHSB
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCceeccccCCCCcEEEEecCCCChHHHHHHHHcc
Confidence 578999998766432 1244456778999999998873 21 23689999998887654334444 7
Q ss_pred CCccceecccc--cccccC-----CCccc--cCCCCCCeEeCcCCccCcccch
Q 040294 65 LKSLQFLSLGH--NRLQGS-----IPNSF--DDLVSLESLDLSNNNLSEIIPL 108 (360)
Q Consensus 65 l~~L~~L~l~~--N~l~g~-----~p~~~--~~l~~L~~l~ls~N~l~~~~p~ 108 (360)
+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+....+.
T Consensus 218 lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 218 LPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp CTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred CCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 89999999853 332221 11122 3578999999999998765443
No 425
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.07 E-value=0.0014 Score=59.27 Aligned_cols=31 Identities=23% Similarity=0.333 Sum_probs=25.9
Q ss_pred CCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
...++|+|+.+.||+ ..++.+.++||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 445899999999999 5667789999988764
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.76 E-value=0.00032 Score=59.55 Aligned_cols=100 Identities=14% Similarity=0.175 Sum_probs=54.6
Q ss_pred CCCcEeeCCCC-cccc----cCCccccCCcccCeeeccccccCCc-------------ccCeEEcCCCccccc----CCc
Q 040294 3 AALFQLDLRGN-KLSG----SIPTCFSNLTALRNLHLDSNELRHL-------------VLTRTDFSRNNLLGD----IPT 60 (360)
Q Consensus 3 ~~L~~L~L~~N-~l~g----~~p~~~~~l~~L~~L~l~~N~l~~~-------------~L~~l~l~~N~l~~~----~p~ 60 (360)
+.|+.|+|++| +|.. .+-..+..-+.|+.|+|++|++..- .|+.|+|++|.|... +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 45777777774 6542 1223345556677777777777531 467777777776531 112
Q ss_pred cccCCCccceecccccc---ccc----CCCccccCCCCCCeEeCcCCcc
Q 040294 61 TIQGLKSLQFLSLGHNR---LQG----SIPNSFDDLVSLESLDLSNNNL 102 (360)
Q Consensus 61 ~~~~l~~L~~L~l~~N~---l~g----~~p~~~~~l~~L~~l~ls~N~l 102 (360)
.+..-+.|++|+|++|. +.. .+-..+..-+.|+.|+|+.|..
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 23334457777776442 221 1222344445666777666543
No 427
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.73 E-value=0.0033 Score=60.55 Aligned_cols=63 Identities=19% Similarity=0.284 Sum_probs=42.8
Q ss_pred CeeccCCCccEEEEEccC-CcEEEehhh----------HHHHHHhhcCCCCCe-eEEEEEecCCCeEEEEEEccCCCCH
Q 040294 206 NLIGRGSFGSVYKARLQD-GMEFAIKSF----------DVECEVMKSIHHRNL-VKIISSCSNEDFRALVLEYMTNGSL 272 (360)
Q Consensus 206 ~~iG~G~~g~Vy~~~~~~-~~~vavK~~----------~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~~~g~L 272 (360)
+.|+.|-...+|+....+ +..+.+|.. ..|..+++.+...++ .++++.+.. .+||||++|.++
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCccC
Confidence 467778888999988764 467777632 578888888865444 577777742 259999987443
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.71 E-value=0.0038 Score=56.79 Aligned_cols=148 Identities=14% Similarity=0.129 Sum_probs=79.8
Q ss_pred cCHHHHHHHhCCCCCC-----CeeccCCCccEEEEEccCCcEEEehh---------hHHHHHHhhcCCCCC--eeEEEEE
Q 040294 190 FSYLELLRATNGFSAN-----NLIGRGSFGSVYKARLQDGMEFAIKS---------FDVECEVMKSIHHRN--LVKIISS 253 (360)
Q Consensus 190 ~~~~~~~~~~~~f~~~-----~~iG~G~~g~Vy~~~~~~~~~vavK~---------~~~E~~~l~~l~hpn--iv~l~~~ 253 (360)
++..++......|... +.|+.|....+|+....+| .+++|. +..|.++++.+.... +.+++..
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~ 85 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPR 85 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCC
Confidence 3445555544555542 3456677788999887655 566663 345777766554222 2233321
Q ss_pred e------cCCCeEEEEEEccCCCCHHH--------------HHhcC--C--CC-------CCHHHHHH------------
Q 040294 254 C------SNEDFRALVLEYMTNGSLEK--------------VLYSS--N--CI-------LDILQRLN------------ 290 (360)
Q Consensus 254 ~------~~~~~~~lv~e~~~~g~L~~--------------~l~~~--~--~~-------~~~~~~~~------------ 290 (360)
. ...+..+++|||++|..+.. .+|.. . .. ..|.....
T Consensus 86 ~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 165 (322)
T 2ppq_A 86 KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKG 165 (322)
T ss_dssp TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTT
T ss_pred CCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhh
Confidence 1 12356789999999854310 12211 0 00 11222110
Q ss_pred HHHHHHHHHHHhhhc----CCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 291 IMINVTSALEYLHFG----FSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 291 i~~~i~~~l~yLH~~----~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
+...+.+.++++... ....++|+|+.+.||+++++..+.|.||+.+..
T Consensus 166 l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 166 LREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011133445555421 245789999999999999876668999988754
No 429
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.67 E-value=0.004 Score=58.45 Aligned_cols=129 Identities=12% Similarity=0.137 Sum_probs=73.8
Q ss_pred CeeccCCCccEEEEEccC--------CcEEEehh----------hHHHHHHhhcCC-CCCeeEEEEEecCCCeEEEEEEc
Q 040294 206 NLIGRGSFGSVYKARLQD--------GMEFAIKS----------FDVECEVMKSIH-HRNLVKIISSCSNEDFRALVLEY 266 (360)
Q Consensus 206 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~----------~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~e~ 266 (360)
+.+..|-...+|+....+ ++.+.+|. +.+|.++++.+. +.-..++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 456667778888887642 35677753 346888877664 2223566777764 289999
Q ss_pred cCCCCHHH-----------------HHhcCCC----CCC--HHHHHHHHHHHH-------------------HHHHHhh-
Q 040294 267 MTNGSLEK-----------------VLYSSNC----ILD--ILQRLNIMINVT-------------------SALEYLH- 303 (360)
Q Consensus 267 ~~~g~L~~-----------------~l~~~~~----~~~--~~~~~~i~~~i~-------------------~~l~yLH- 303 (360)
++|..+.. .+|.... ... |.+..++..++. ..+++|.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 99854421 1122111 122 233333333221 1223332
Q ss_pred ----hcCCCCeEEccCCCCceeecCC----CcEEEeecccccc
Q 040294 304 ----FGFSTPIIHCDLKPHNVLLDDN----IVAHLSDFGIAKL 338 (360)
Q Consensus 304 ----~~~~~~iiHrdlk~~NiLl~~~----~~~ki~DFGla~~ 338 (360)
......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1224568999999999999876 7899999988764
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.54 E-value=0.0013 Score=63.01 Aligned_cols=62 Identities=18% Similarity=0.297 Sum_probs=41.0
Q ss_pred CeeccCCCccEEEEEccC--------CcEEEehhh---------HHHHHHhhcCCCCCe-eEEEEEecCCCeEEEEEEcc
Q 040294 206 NLIGRGSFGSVYKARLQD--------GMEFAIKSF---------DVECEVMKSIHHRNL-VKIISSCSNEDFRALVLEYM 267 (360)
Q Consensus 206 ~~iG~G~~g~Vy~~~~~~--------~~~vavK~~---------~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~e~~ 267 (360)
+.|+.|....+|+....+ +..+.+|.. ..|..+++.+...++ .++++.+.+ .+||||+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l 154 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI 154 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEe
Confidence 457778888999988653 466776643 247777776643333 567776653 3899999
Q ss_pred CCCC
Q 040294 268 TNGS 271 (360)
Q Consensus 268 ~~g~ 271 (360)
+|.+
T Consensus 155 ~G~~ 158 (429)
T 1nw1_A 155 PSRP 158 (429)
T ss_dssp CEEE
T ss_pred CCcc
Confidence 8743
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.50 E-value=0.0029 Score=49.92 Aligned_cols=57 Identities=30% Similarity=0.390 Sum_probs=38.3
Q ss_pred cEeeCCCCccc-ccCCccccCCcccCeeeccccccCCcccCeEEcCCCcccccCCccccCCCccceecccccccc
Q 040294 6 FQLDLRGNKLS-GSIPTCFSNLTALRNLHLDSNELRHLVLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQ 79 (360)
Q Consensus 6 ~~L~L~~N~l~-g~~p~~~~~l~~L~~L~l~~N~l~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 79 (360)
+.++.+++.|+ ..+|..+. .+|+.|+|++| +|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N---------------~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGN---------------NLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTS---------------CCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCC---------------cCCccChhhhhhccccCEEEecCCCee
Confidence 35677777776 34554433 24555555554 555444667889999999999999986
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.48 E-value=0.00078 Score=56.08 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=36.0
Q ss_pred cCeEEcCCCc-ccccCCccccCC----Cccceecccccc-cccCCCccccCCCCCCeEeCcCCc
Q 040294 44 LTRTDFSRNN-LLGDIPTTIQGL----KSLQFLSLGHNR-LQGSIPNSFDDLVSLESLDLSNNN 101 (360)
Q Consensus 44 L~~l~l~~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~g~~p~~~~~l~~L~~l~ls~N~ 101 (360)
|+.|+|+++. ++..--..+..+ ++|+.|+|+++. ++..-=..+..+++|++|+|++..
T Consensus 87 L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 87 VEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred CCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 5555555553 332211234443 479999999875 763222346788999999999874
No 433
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.43 E-value=0.0041 Score=57.91 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=25.2
Q ss_pred CCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
...++|+|+.+.||+++++. +.|+||..+..
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 45689999999999998654 89999987753
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.40 E-value=0.016 Score=52.78 Aligned_cols=130 Identities=12% Similarity=0.163 Sum_probs=72.5
Q ss_pred CeeccCCCccEEEEEccCCcEEEehhh----------HHHHHHhhcCCCCC--eeEEEEE-----ecCCCeEEEEEEccC
Q 040294 206 NLIGRGSFGSVYKARLQDGMEFAIKSF----------DVECEVMKSIHHRN--LVKIISS-----CSNEDFRALVLEYMT 268 (360)
Q Consensus 206 ~~iG~G~~g~Vy~~~~~~~~~vavK~~----------~~E~~~l~~l~hpn--iv~l~~~-----~~~~~~~~lv~e~~~ 268 (360)
..++ |....||+....+|+.+++|.. ..|..+++.+.... +++++.. ...++..+++|||++
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 4566 7778899988777777888743 34666666554212 3334332 112446688999998
Q ss_pred CCCHH-----H---------HHhc----C----CCCCCHHHH----HHH---------------HHHHHHHHHHhhh---
Q 040294 269 NGSLE-----K---------VLYS----S----NCILDILQR----LNI---------------MINVTSALEYLHF--- 304 (360)
Q Consensus 269 ~g~L~-----~---------~l~~----~----~~~~~~~~~----~~i---------------~~~i~~~l~yLH~--- 304 (360)
|..+. . .+|. . ....++... ..+ ...+...++.+..
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 85421 1 1111 0 011222110 000 0011112222221
Q ss_pred -cCCCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 305 -GFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 305 -~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
.....++|+|+++.||+++ + .+.|.||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1245689999999999999 4 899999987764
No 435
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.39 E-value=0.02 Score=53.20 Aligned_cols=107 Identities=17% Similarity=0.236 Sum_probs=64.3
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccCCc---------ccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELRHL---------VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~---------~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
.+|+.+.+..+ ++..-...|.++..|+.+.+..+ ++.+ .|+.+.+..+ +...-...|.+|.+|+.+.+
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 34555555443 33233445667777777777554 2221 4666666543 44333456778888888888
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCcccchhhhcc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 113 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~l~~l 113 (360)
.++.++..-+..|.++.+|+.++|..+ ++.+-..++..+
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C 332 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNC 332 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCC
Confidence 888777444567888888888888654 554444455543
No 436
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.26 E-value=0.012 Score=55.28 Aligned_cols=38 Identities=16% Similarity=0.331 Sum_probs=19.0
Q ss_pred ccccCCCccceecccccccccCCCccccCCCCCCeEeCc
Q 040294 60 TTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLS 98 (360)
Q Consensus 60 ~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls 98 (360)
.+|.+|.+|+.+.|..| ++-.-..+|.++++|+.+.|.
T Consensus 305 ~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 305 SVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred eeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 34555555555555433 332223445555555555554
No 437
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.24 E-value=0.01 Score=55.18 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=75.3
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeecccc-------ccCC-cccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSN-------ELRH-LVLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N-------~l~~-~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
.+.|+.+.+..+ ++..-...|.++.+|+.+.+..+ .+.+ -.|+.+.+.++.++..-..+|.+|.+|+.+.|
T Consensus 239 ~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 239 MKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAKVKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp CSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCCCSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred CccceEEEcCCC-ccEeCccccceeehhccccccccceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 457888888776 66445567889999999988654 1222 26899999988887666778999999999999
Q ss_pred cccccccCCCccccCCCCCCeEeCcCCccCc
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 104 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 104 (360)
..+ ++-.-..+|.++++|+.+.+..| ++.
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~ 346 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITL 346 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCE
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCE
Confidence 765 66334567999999999988654 443
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.09 E-value=0.014 Score=53.70 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=28.1
Q ss_pred CCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
...++|+|+.+.||++++++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45789999999999999888899999987765
No 439
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.00 E-value=0.0098 Score=55.84 Aligned_cols=97 Identities=15% Similarity=0.263 Sum_probs=71.5
Q ss_pred CCCCcEeeCCCCcccccCCccccCCcccCeeeccccccC--------C-cccCeEEcCCCcccccCCccccCCCccceec
Q 040294 2 LAALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELR--------H-LVLTRTDFSRNNLLGDIPTTIQGLKSLQFLS 72 (360)
Q Consensus 2 l~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~--------~-~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~ 72 (360)
++.|+.+.+..+..+ .-...|.++++|+.+.+.. .++ + ..|+.+.|..+ ++..-..+|.+|.+|+.+.
T Consensus 264 c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 264 CAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIA 340 (394)
T ss_dssp CSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEE
Confidence 467888888766554 4456788899999988863 333 2 26888888754 5544456889999999999
Q ss_pred ccccccccCCCccccCCCCCCeEeCcCCcc
Q 040294 73 LGHNRLQGSIPNSFDDLVSLESLDLSNNNL 102 (360)
Q Consensus 73 l~~N~l~g~~p~~~~~l~~L~~l~ls~N~l 102 (360)
|..+ ++-.-..+|.++++|+.+++.+|..
T Consensus 341 ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 341 IPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred ECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 9765 6634457799999999999998754
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.83 E-value=0.012 Score=55.31 Aligned_cols=92 Identities=15% Similarity=0.189 Sum_probs=51.0
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccC--------C-cccCeEEcCCCcccccCCccccCCCccceecc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELR--------H-LVLTRTDFSRNNLLGDIPTTIQGLKSLQFLSL 73 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~--------~-~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l 73 (360)
..|+.+.+..+.+ ....|..+.+|+.+.+..+ ++ + ..|+.+++.++ ++..-..+|.+|.+|+.+.|
T Consensus 276 ~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~l 350 (394)
T 4fs7_A 276 SGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINF 350 (394)
T ss_dssp TTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECC
T ss_pred cccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEE
Confidence 3445555544332 2235677777777777543 22 1 13555555432 33333456677777777777
Q ss_pred cccccccCCCccccCCCCCCeEeCcCC
Q 040294 74 GHNRLQGSIPNSFDDLVSLESLDLSNN 100 (360)
Q Consensus 74 ~~N~l~g~~p~~~~~l~~L~~l~ls~N 100 (360)
..| ++-.-..+|.++++|+.+++..|
T Consensus 351 p~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 351 PLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred Ccc-ccEehHHHhhCCCCCCEEEECCC
Confidence 665 55333456777777777776543
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.48 E-value=0.041 Score=51.50 Aligned_cols=91 Identities=20% Similarity=0.230 Sum_probs=42.0
Q ss_pred CCCcEeeCCCCcccccCCccccCCcccCeeeccccccC-------C-cccCeEEcCCCcccccCCccccCCCccceeccc
Q 040294 3 AALFQLDLRGNKLSGSIPTCFSNLTALRNLHLDSNELR-------H-LVLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLG 74 (360)
Q Consensus 3 ~~L~~L~L~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~-------~-~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~ 74 (360)
++|+.+.+..+ ++..-...|.++..|+.+.+..+..+ . ..++.+.+..+.+. ...|..+.+|+.+.+.
T Consensus 230 ~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~ 305 (394)
T 4fs7_A 230 TGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLL 305 (394)
T ss_dssp CCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEEC
T ss_pred CCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeec---cccccccccccccccc
Confidence 34556655433 22223345666777777766655321 0 12333333333221 2234455555555554
Q ss_pred ccccccCCCccccCCCCCCeEeCc
Q 040294 75 HNRLQGSIPNSFDDLVSLESLDLS 98 (360)
Q Consensus 75 ~N~l~g~~p~~~~~l~~L~~l~ls 98 (360)
.+ ++..-+..|.++++|+.++|.
T Consensus 306 ~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 306 DS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCC
T ss_pred cc-cceechhhhcCCCCCCEEEeC
Confidence 33 332223445555555555554
No 442
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.41 E-value=0.0026 Score=52.87 Aligned_cols=61 Identities=10% Similarity=0.190 Sum_probs=33.1
Q ss_pred ccCeEEcCCCcccccCCccccCCCccceecccccc-cccCCCccccCC----CCCCeEeCcCCc-cC
Q 040294 43 VLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHNR-LQGSIPNSFDDL----VSLESLDLSNNN-LS 103 (360)
Q Consensus 43 ~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~g~~p~~~~~l----~~L~~l~ls~N~-l~ 103 (360)
.|+.||++++.++..=-..+..|++|+.|+|+++. ++..-=..+..+ ++|++|+|+++. +|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT 128 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT 128 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC
Confidence 34445555554443222345677778888887775 542211223443 357788887763 54
No 443
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.91 E-value=0.035 Score=52.79 Aligned_cols=31 Identities=23% Similarity=0.358 Sum_probs=26.8
Q ss_pred CCCeEEccCCCCceeecCCCcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDNIVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~~ 338 (360)
...++|+|+.+.||+ +.++.+.++||..|..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 346899999999999 8888999999988764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.90 E-value=0.031 Score=52.71 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=27.6
Q ss_pred CCCeEEccCCCCceeecCC------CcEEEeecccccc
Q 040294 307 STPIIHCDLKPHNVLLDDN------IVAHLSDFGIAKL 338 (360)
Q Consensus 307 ~~~iiHrdlk~~NiLl~~~------~~~ki~DFGla~~ 338 (360)
...++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 4568999999999999876 7899999988764
No 445
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.46 E-value=0.012 Score=49.69 Aligned_cols=77 Identities=14% Similarity=0.176 Sum_probs=49.7
Q ss_pred cCCcccCeeecccc-ccCC-------------cccCeEEcCCCccccc----CCccccCCCccceecccccccccC----
Q 040294 24 SNLTALRNLHLDSN-ELRH-------------LVLTRTDFSRNNLLGD----IPTTIQGLKSLQFLSLGHNRLQGS---- 81 (360)
Q Consensus 24 ~~l~~L~~L~l~~N-~l~~-------------~~L~~l~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~g~---- 81 (360)
.+-+.|+.|+|++| .+.. ..|+.|+|++|++... +-..+..-+.|+.|+|+.|.|...
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~a 117 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 117 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHH
Confidence 34567888888875 6642 1578888888887531 222334556788888888888631
Q ss_pred CCccccCCCCCCeEeCcCC
Q 040294 82 IPNSFDDLVSLESLDLSNN 100 (360)
Q Consensus 82 ~p~~~~~l~~L~~l~ls~N 100 (360)
+-..+..-+.|++|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 2233555567888888765
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.75 E-value=0.1 Score=49.16 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=25.0
Q ss_pred CeEEccCCCCceee------cCCCcEEEeecccccc
Q 040294 309 PIIHCDLKPHNVLL------DDNIVAHLSDFGIAKL 338 (360)
Q Consensus 309 ~iiHrdlk~~NiLl------~~~~~~ki~DFGla~~ 338 (360)
.++|+|+.+.||++ +++..+.++||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4467799999988764
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=83.48 E-value=4.3 Score=34.49 Aligned_cols=88 Identities=13% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCCCCeeEEEEEecCCCeEEEEEEccCCC-CHHHHHhcCCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeEEccCCCCc
Q 040294 242 IHHRNLVKIISSCSNEDFRALVLEYMTNG-SLEKVLYSSNCILDILQRLNIMINVTSALE-YLHFGFSTPIIHCDLKPHN 319 (360)
Q Consensus 242 l~hpniv~l~~~~~~~~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~-yLH~~~~~~iiHrdlk~~N 319 (360)
-.||++ -..+-.+++.+.+.++.-+++ ++. .+. ..+...+++++..++.-.. +++ .-+|--+.|+|
T Consensus 47 ~~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~N 114 (219)
T 4ano_A 47 EVDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPEN 114 (219)
T ss_dssp GSCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGG
T ss_pred ccCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCce
Confidence 368888 334446777777777765333 343 332 3567788888888877655 333 35788899999
Q ss_pred eeecCCCcEEEeecccccccCC
Q 040294 320 VLLDDNIVAHLSDFGIAKLLTG 341 (360)
Q Consensus 320 iLl~~~~~~ki~DFGla~~~~~ 341 (360)
+.+|.++.++|.-.|+-..+.+
T Consensus 115 L~f~~~~~p~i~hRGi~~~lpP 136 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESLPP 136 (219)
T ss_dssp EEECTTCCEEESCCEETTTBSS
T ss_pred EEEeCCCcEEEEEcCCcccCCC
Confidence 9999999999999998776644
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.97 E-value=2.8 Score=35.60 Aligned_cols=90 Identities=10% Similarity=0.141 Sum_probs=64.0
Q ss_pred CCCCCeeEEEEEecCCCeEEEEEEccCC-CCHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCce
Q 040294 242 IHHRNLVKIISSCSNEDFRALVLEYMTN-GSLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNV 320 (360)
Q Consensus 242 l~hpniv~l~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~Ni 320 (360)
-.||+.+.. .+-.+++.+.+.|+.-+. -++.. +. ..+...+++++..|+.-..+++ . -+|--+.|+|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL 110 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDEL 110 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGE
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceE
Confidence 468888876 566666766666665432 22322 22 3567788999999888775555 2 36888999999
Q ss_pred eecCCCcEEEeecccccccCCC
Q 040294 321 LLDDNIVAHLSDFGIAKLLTGE 342 (360)
Q Consensus 321 Ll~~~~~~ki~DFGla~~~~~~ 342 (360)
.++.++.+++.-.|+...+.+.
T Consensus 111 ~f~~~~~p~i~~RGik~~l~P~ 132 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVDPL 132 (215)
T ss_dssp EECTTSCEEESCCEETTTBSCC
T ss_pred EEcCCCCEEEEEccCccCCCCC
Confidence 9999999999999987665543
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.99 E-value=0.27 Score=47.21 Aligned_cols=47 Identities=11% Similarity=0.070 Sum_probs=15.8
Q ss_pred CCeeccCCCccEEEEEccC-CcEEEe------hh-------------hHHHHHHhhcCCCCCeeEEEEEe
Q 040294 205 NNLIGRGSFGSVYKARLQD-GMEFAI------KS-------------FDVECEVMKSIHHRNLVKIISSC 254 (360)
Q Consensus 205 ~~~iG~G~~g~Vy~~~~~~-~~~vav------K~-------------~~~E~~~l~~l~hpniv~l~~~~ 254 (360)
.+.+| ||.||+|.+.. ..+||| |. |..|..+++..+|||+++.+++.
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 45565 99999999764 467888 42 34466777788999999987764
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=42.78 E-value=29 Score=25.14 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=27.2
Q ss_pred CccccCCCccceecccccccccCCCccccCCCCCCeEeCcCC
Q 040294 59 PTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNN 100 (360)
Q Consensus 59 p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~ls~N 100 (360)
..+|.+|.+|+.+.|..+ ++..-...|.++.+|+.+.+...
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 456777777777777654 33233466888888888876553
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.69 E-value=98 Score=22.21 Aligned_cols=49 Identities=20% Similarity=0.245 Sum_probs=34.0
Q ss_pred CCcccccCCccccCCcccCeeeccccccCCcccCeEEcCCCcccccCCccccCCCccceeccccc
Q 040294 12 GNKLSGSIPTCFSNLTALRNLHLDSNELRHLVLTRTDFSRNNLLGDIPTTIQGLKSLQFLSLGHN 76 (360)
Q Consensus 12 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~L~~l~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 76 (360)
+..++..-...|.+|++|+.+.+..+ + +..=..+|.+|.+|+.+.+...
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v---------------~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-I---------------GLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-S---------------SCCCTTSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-h---------------heEcHHHHhccCCccEEEEcCC
Confidence 34566545567999999999988643 2 2112457889999999988654
No 452
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=25.58 E-value=1.2e+02 Score=25.68 Aligned_cols=60 Identities=17% Similarity=0.081 Sum_probs=44.6
Q ss_pred CHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEee
Q 040294 271 SLEKVLYSSNCILDILQRLNIMINVTSALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSD 332 (360)
Q Consensus 271 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 332 (360)
+|.++|...+..+++.++..++.|.+.+|.-+-.. ..+ ..+=.-|..|++..+|.+...+
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~ 93 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP 93 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc
Confidence 79999998888999999999999999988766210 011 1223346888999999887764
No 453
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=21.32 E-value=51 Score=32.99 Aligned_cols=44 Identities=23% Similarity=0.212 Sum_probs=31.3
Q ss_pred HHHHHHHHHH--HHHHHhhhcCCCCeEEccCCCCceeecCCCcEEEeeccccc
Q 040294 287 QRLNIMINVT--SALEYLHFGFSTPIIHCDLKPHNVLLDDNIVAHLSDFGIAK 337 (360)
Q Consensus 287 ~~~~i~~~i~--~~l~yLH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DFGla~ 337 (360)
.+..++..+| .-+.|+= .. +|=.++|||++.+|++.-+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YIL---Gl----GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLL---GV----GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHc---cC----CCCCCcceEEeCCCCEEEEeehhhh
Confidence 4455555554 3344443 22 5778999999999999999999875
Done!