BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040300
(605 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPJ4|AB2E_ARATH ABC transporter E family member 2 OS=Arabidopsis thaliana GN=ABCE2
PE=2 SV=1
Length = 605
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/605 (91%), Positives = 586/605 (96%)
Query: 1 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI 60
M+DRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVT +K+AFISEELCIGCGI
Sbjct: 1 MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTVGSKLAFISEELCIGCGI 60
Query: 61 CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL 120
CVKKCPFEAIQIINLP+DL+KDTTHRYG NTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
Sbjct: 61 CVKKCPFEAIQIINLPRDLEKDTTHRYGANTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL 120
Query: 121 KILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV 180
KILAGKLKPNLGRF +PPDWQEILT+FRGSELQNYFTRILEDNLKAIIKPQYVDHIP+AV
Sbjct: 121 KILAGKLKPNLGRFTSPPDWQEILTHFRGSELQNYFTRILEDNLKAIIKPQYVDHIPRAV 180
Query: 181 QGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMF 240
+GNVG+VLDQKDERD KA+LC DL+LNQVIDR+V +LSGGELQRFAIAVVA+QNAEIYMF
Sbjct: 181 KGNVGEVLDQKDERDKKAELCADLELNQVIDRDVENLSGGELQRFAIAVVAIQNAEIYMF 240
Query: 241 DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT 300
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
Sbjct: 241 DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT 300
Query: 301 LPFSVREGINIFLAGFVPTENLRFRDESLTFRVAETPQESAEEIETYARYKYPTMVKTQG 360
LPFSVREGINIFLAGFVPTENLRFRDESLTF+VAETPQESAEEI++YARYKYPTM KTQG
Sbjct: 301 LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIQSYARYKYPTMTKTQG 360
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQ 420
NF+L+V EGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD E D EIPEFNVSYKPQ
Sbjct: 361 NFRLRVSEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDDTEGPDREIPEFNVSYKPQ 420
Query: 421 KISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL 480
KISPKFQ++VRHLLHQKIRDSY HPQF+SDVMKPL IEQLMDQEVVNLSGGELQRVAL L
Sbjct: 421 KISPKFQNSVRHLLHQKIRDSYMHPQFMSDVMKPLQIEQLMDQEVVNLSGGELQRVALTL 480
Query: 481 CLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV 540
CLGKPADIYLIDEPSAYLDSEQRIVA+KVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
Sbjct: 481 CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV 540
Query: 541 YEGQPSVDCVANAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQKAAGSY 600
YEGQPS+DC AN PQSLL+GMNLFLSHL+ITFRRDPTNFRPRINKL+STKDR+QK+AGSY
Sbjct: 541 YEGQPSIDCTANCPQSLLSGMNLFLSHLNITFRRDPTNFRPRINKLESTKDREQKSAGSY 600
Query: 601 YYLDD 605
YYLDD
Sbjct: 601 YYLDD 605
>sp|Q9LID6|AB1E_ARATH ABC transporter E family member 1 OS=Arabidopsis thaliana GN=ABCE1
PE=2 SV=1
Length = 603
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/605 (79%), Positives = 540/605 (89%), Gaps = 2/605 (0%)
Query: 1 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI 60
MSDRLTRIAIVS DRCKPKKCRQECKKSCPVVKTGKLCIEV +K AFISEELCIGCGI
Sbjct: 1 MSDRLTRIAIVSEDRCKPKKCRQECKKSCPVVKTGKLCIEVGSTSKSAFISEELCIGCGI 60
Query: 61 CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL 120
CVKKCPFEAIQIINLPKDL KDTTHRYG N FKLHRLP+PRPGQVLGLVGTNGIGKSTAL
Sbjct: 61 CVKKCPFEAIQIINLPKDLAKDTTHRYGANGFKLHRLPIPRPGQVLGLVGTNGIGKSTAL 120
Query: 121 KILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV 180
KILAGKLKPNLGRFN PPDW+EILT+FRGSELQ+YF R++E+NLK IKPQ+VD+I + V
Sbjct: 121 KILAGKLKPNLGRFNTPPDWEEILTHFRGSELQSYFIRVVEENLKTAIKPQHVDYIKEVV 180
Query: 181 QGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMF 240
+GN+G++L++ DER + ++C D++LNQV++R +SGGELQRFAIA V V+ A+IYMF
Sbjct: 181 RGNLGKMLEKLDERGLMEEICADMELNQVLEREARQVSGGELQRFAIAAVFVKKADIYMF 240
Query: 241 DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT 300
DEPSSYLDV+QRLKAAQV+RSLLR +SYVIVVEHDLSVLDYLSDF+CCLYGKPGAYGVVT
Sbjct: 241 DEPSSYLDVRQRLKAAQVIRSLLRHDSYVIVVEHDLSVLDYLSDFVCCLYGKPGAYGVVT 300
Query: 301 LPFSVREGINIFLAGFVPTENLRFRDESLTFRVAETPQESAEEIETYARYKYPTMVKTQG 360
LPFSVREGIN+FLAGF+PTENLRFRDESLTFRV+ET QE+ E+++YARYKYP M K G
Sbjct: 301 LPFSVREGINVFLAGFIPTENLRFRDESLTFRVSETTQENDGEVKSYARYKYPNMTKQLG 360
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQ 420
+FKL+V+EGEFTDSQIIVMLGENGTGKTTFIRMLAG + E EIPEFNVSYKPQ
Sbjct: 361 DFKLEVMEGEFTDSQIIVMLGENGTGKTTFIRMLAGAFPRE--EGVQSEIPEFNVSYKPQ 418
Query: 421 KISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL 480
K + TVR LLH KIRD+ HPQF+SDV++PL IEQLMDQ V LSGGE QRVA+ L
Sbjct: 419 GNDSKRECTVRQLLHDKIRDACAHPQFMSDVIRPLQIEQLMDQVVKTLSGGEKQRVAITL 478
Query: 481 CLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV 540
CLGKPADIYLIDEPSA+LDSEQRI A+KVIKRFILHAKKTAF+VEHDFIMATYLADRVIV
Sbjct: 479 CLGKPADIYLIDEPSAHLDSEQRITASKVIKRFILHAKKTAFIVEHDFIMATYLADRVIV 538
Query: 541 YEGQPSVDCVANAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQKAAGSY 600
YEGQP+V C+A++PQSLL+GMN FLSHL+ITFRRDPTNFRPRINKL+S KD++QK AGSY
Sbjct: 539 YEGQPAVKCIAHSPQSLLSGMNHFLSHLNITFRRDPTNFRPRINKLESIKDKEQKTAGSY 598
Query: 601 YYLDD 605
YYLDD
Sbjct: 599 YYLDD 603
>sp|P61222|ABCE1_MOUSE ATP-binding cassette sub-family E member 1 OS=Mus musculus GN=Abce1
PE=2 SV=1
Length = 599
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/605 (75%), Positives = 524/605 (86%), Gaps = 6/605 (0%)
Query: 1 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI 60
M+D+LTRIAIV+ D+CKPKKCRQECKKSCPVV+ GKLCIEVTP +KIA+ISE LCIGCGI
Sbjct: 1 MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGI 60
Query: 61 CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL 120
C+KKCPF A+ I+NLP +L+K+TTHRY N FKLHRLP+PRPG+VLGLVGTNGIGKSTAL
Sbjct: 61 CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL 120
Query: 121 KILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV 180
KILAGK KPNLG++++PPDWQEILTYFRGSELQNYFT+ILED+LKAIIKPQYVD IPKA
Sbjct: 121 KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA 180
Query: 181 QGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMF 240
+G VG +LD+KDE +A +C LDL + +RNV DLSGGELQRFA AVV +Q A+I+MF
Sbjct: 181 KGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF 240
Query: 241 DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT 300
DEPSSYLDVKQRLKAA +RSL+ P+ Y+IVVEHDLSVLDYLSDFICCLYG P AYGVVT
Sbjct: 241 DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT 300
Query: 301 LPFSVREGINIFLAGFVPTENLRFRDESLTFRVAETPQESAEEIETYARYKYPTMVKTQG 360
+PFSVREGINIFL G+VPTENLRFRD SL F+VAET E EE++ YKYP M K G
Sbjct: 301 MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANE--EEVKKMCMYKYPGMKKKMG 358
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQ 420
F+L +V GEFTDS+I+VMLGENGTGKTTFIRMLAG LKP D E+P NVSYKPQ
Sbjct: 359 EFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKP----DEGGEVPVLNVSYKPQ 414
Query: 421 KISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL 480
KISPK +VR LLH+KIRD+YTHPQFV+DVMKPL IE ++DQEV LSGGELQRVAL L
Sbjct: 415 KISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALAL 474
Query: 481 CLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV 540
CLGKPAD+YLIDEPSAYLDSEQR++AA+V+KRFILHAKKTAFVVEHDFIMATYLADRVIV
Sbjct: 475 CLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIV 534
Query: 541 YEGQPSVDCVANAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQKAAGSY 600
++G PS + VAN+PQ+LL GMN FLS L+ITFRRDP N+RPRINKL+S KD +QK +G+Y
Sbjct: 535 FDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNY 594
Query: 601 YYLDD 605
++LDD
Sbjct: 595 FFLDD 599
>sp|P61221|ABCE1_HUMAN ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1
PE=1 SV=1
Length = 599
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/605 (75%), Positives = 524/605 (86%), Gaps = 6/605 (0%)
Query: 1 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI 60
M+D+LTRIAIV+ D+CKPKKCRQECKKSCPVV+ GKLCIEVTP +KIA+ISE LCIGCGI
Sbjct: 1 MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGI 60
Query: 61 CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL 120
C+KKCPF A+ I+NLP +L+K+TTHRY N FKLHRLP+PRPG+VLGLVGTNGIGKSTAL
Sbjct: 61 CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL 120
Query: 121 KILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV 180
KILAGK KPNLG++++PPDWQEILTYFRGSELQNYFT+ILED+LKAIIKPQYVD IPKA
Sbjct: 121 KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA 180
Query: 181 QGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMF 240
+G VG +LD+KDE +A +C LDL + +RNV DLSGGELQRFA AVV +Q A+I+MF
Sbjct: 181 KGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF 240
Query: 241 DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT 300
DEPSSYLDVKQRLKAA +RSL+ P+ Y+IVVEHDLSVLDYLSDFICCLYG P AYGVVT
Sbjct: 241 DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT 300
Query: 301 LPFSVREGINIFLAGFVPTENLRFRDESLTFRVAETPQESAEEIETYARYKYPTMVKTQG 360
+PFSVREGINIFL G+VPTENLRFRD SL F+VAET E EE++ YKYP M K G
Sbjct: 301 MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANE--EEVKKMCMYKYPGMKKKMG 358
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQ 420
F+L +V GEFTDS+I+VMLGENGTGKTTFIRMLAG LKP D E+P NVSYKPQ
Sbjct: 359 EFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKP----DEGGEVPVLNVSYKPQ 414
Query: 421 KISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL 480
KISPK +VR LLH+KIRD+YTHPQFV+DVMKPL IE ++DQEV LSGGELQRVAL L
Sbjct: 415 KISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALAL 474
Query: 481 CLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV 540
CLGKPAD+YLIDEPSAYLDSEQR++AA+V+KRFILHAKKTAFVVEHDFIMATYLADRVIV
Sbjct: 475 CLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIV 534
Query: 541 YEGQPSVDCVANAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQKAAGSY 600
++G PS + VAN+PQ+LL GMN FLS L+ITFRRDP N+RPRINKL+S KD +QK +G+Y
Sbjct: 535 FDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNY 594
Query: 601 YYLDD 605
++LDD
Sbjct: 595 FFLDD 599
>sp|Q03195|RLI1_YEAST Translation initiation factor RLI1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RLI1 PE=1 SV=1
Length = 608
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/611 (68%), Positives = 506/611 (82%), Gaps = 12/611 (1%)
Query: 1 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI 60
MSD+ +RIAIVS+D+CKPKKCRQECK+SCPVVKTGKLCIEVTP +KIAFISE LCIGCGI
Sbjct: 1 MSDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGI 60
Query: 61 CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL 120
CVKKCPF+AIQIINLP +L+ THRY N+FKLHRLP PRPGQVLGLVGTNGIGKSTAL
Sbjct: 61 CVKKCPFDAIQIINLPTNLEAHVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTAL 120
Query: 121 KILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV 180
KILAGK KPNLGRF++PP+WQEI+ YFRGSELQNYFT++LED++KAIIKPQYVD+IP+A+
Sbjct: 121 KILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAI 180
Query: 181 QG---NVGQVLD---QKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQN 234
+G VG++L +K D+K + L L V+ R++ LSGGELQRFAI + VQ
Sbjct: 181 KGPVQKVGELLKLRMEKSPEDVKRYIKI-LQLENVLKRDIEKLSGGELQRFAIGMSCVQE 239
Query: 235 AEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPG 294
A++YMFDEPSSYLDVKQRL AAQ++RSLL P YVI VEHDLSVLDYLSDF+C +YG P
Sbjct: 240 ADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYGVPS 299
Query: 295 AYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFRVAETPQESAEEIETYARYKYPT 354
YGVVTLP SVREGINIFL G +P ENLRFR E+L FR+A+ ++ + + A + YP+
Sbjct: 300 VYGVVTLPASVREGINIFLDGHIPAENLRFRTEALQFRIADATEDLQNDSASRA-FSYPS 358
Query: 355 MVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFN 414
+ KTQG+F L V EGEF+DS+I+VM+GENGTGKTT I++LAG LKPD +D IP+ N
Sbjct: 359 LKKTQGDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQD----IPKLN 414
Query: 415 VSYKPQKISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQ 474
VS KPQKI+PKF TVR L +KIR + +PQF +DV+KPL I+ ++DQEV +LSGGELQ
Sbjct: 415 VSMKPQKIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQ 474
Query: 475 RVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYL 534
RVA+ L LG PADIYLIDEPSAYLDSEQRI+ +KVI+RFILH KKTAF+VEHDFIMATYL
Sbjct: 475 RVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYL 534
Query: 535 ADRVIVYEGQPSVDCVANAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQ 594
AD+VIV+EG PS + A AP+SLLTG N FL +L++TFRRDP +FRPRINKLDS D++Q
Sbjct: 535 ADKVIVFEGIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQ 594
Query: 595 KAAGSYYYLDD 605
K++G+Y++LD+
Sbjct: 595 KSSGNYFFLDN 605
>sp|O60102|RLI1_SCHPO Translation initiation factor rli1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rli1 PE=3 SV=1
Length = 593
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/608 (65%), Positives = 491/608 (80%), Gaps = 18/608 (2%)
Query: 1 MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI 60
MS+ LTRIAIVS D+C+PKKCRQEC++SCPVV+TGKLCIEV P +IAFISE LCIGCGI
Sbjct: 1 MSESLTRIAIVSEDKCRPKKCRQECRRSCPVVRTGKLCIEVNPTDRIAFISETLCIGCGI 60
Query: 61 CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL 120
CVKKCPF AI IINLP +L+ + THRY N+FKLHRLP PRPGQVLGLVGTNGIGKSTAL
Sbjct: 61 CVKKCPFGAINIINLPTNLESEVTHRYSANSFKLHRLPTPRPGQVLGLVGTNGIGKSTAL 120
Query: 121 KILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV 180
KIL+GK+KPNLGR++NPPDW E++ YFRGSELQN+FT+++EDN+KA+IKPQYVDHIP+A+
Sbjct: 121 KILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVEDNIKALIKPQYVDHIPRAI 180
Query: 181 QG---NVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEI 237
+ V ++ + + ++ DL +++R VG LSGGELQRFAIA VA Q A++
Sbjct: 181 KTGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHLSGGELQRFAIAAVATQKADV 240
Query: 238 YMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 297
YMFDEPSSYLD+KQRLKA +V+RSLL +YVIVVEHDLSVLDYLSDF+C LYG P YG
Sbjct: 241 YMFDEPSSYLDIKQRLKAGRVIRSLLATTNYVIVVEHDLSVLDYLSDFVCVLYGVPSMYG 300
Query: 298 VVTLPFSVREGINIFLAGFVPTENLRFRDESLTFRVAETPQESAEEIETYARYKYPTMVK 357
VVTLP+SVREGINIFL G +PTENLRFR E+LTFR+A+ E + A Y YP V
Sbjct: 301 VVTLPYSVREGINIFLDGHIPTENLRFRSEALTFRLADASDEITA--DRTAEYNYPDHVI 358
Query: 358 TQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSY 417
QG+FKL + G F+D++IIV+LGENGTGKTTF + +A ++SD++I S
Sbjct: 359 EQGDFKLTIKSGGFSDAEIIVLLGENGTGKTTFCKWMA--------KNSDLKI-----SM 405
Query: 418 KPQKISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVA 477
KPQ I+PKFQ TVR L +KIR ++ + +F S+V KPL I+ ++DQEV+NLSGGELQRVA
Sbjct: 406 KPQTIAPKFQGTVRMLFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQEVLNLSGGELQRVA 465
Query: 478 LCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADR 537
+CL LG PAD+YLIDEPSAYLDSEQRI+A+KVI+RFI++++KTAF+VEHDFIMATYLADR
Sbjct: 466 ICLALGMPADVYLIDEPSAYLDSEQRIIASKVIRRFIVNSRKTAFIVEHDFIMATYLADR 525
Query: 538 VIVYEGQPSVDCVANAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQKAA 597
VI++EGQPS D N PQSLLTGMN FL +LD+TFRRDP RPRINK DS D++QK A
Sbjct: 526 VILFEGQPSRDARCNPPQSLLTGMNTFLKNLDVTFRRDPNTLRPRINKFDSQMDQEQKNA 585
Query: 598 GSYYYLDD 605
G+Y++L++
Sbjct: 586 GNYFFLEN 593
>sp|Q58129|Y719_METJA Uncharacterized ABC transporter ATP-binding protein MJ0719
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0719
PE=3 SV=1
Length = 600
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 293/607 (48%), Positives = 398/607 (65%), Gaps = 24/607 (3%)
Query: 5 LTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGICVKK 64
R+AI+ DRC+PKKC EC K CP V+ G+ IE+ ISE LC GCGICVK+
Sbjct: 12 FMRLAIIDYDRCQPKKCSMECMKYCPGVRMGEKTIEIDENTGKPVISEVLCSGCGICVKR 71
Query: 65 CPFEAIQIINLPKDLDKD-TTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKIL 123
CPF+AI II LP++L +D H YG N FKL L +PR G V+G++G NGIGKST L+IL
Sbjct: 72 CPFKAISIIGLPEELSEDKIVHSYGQNRFKLFGLVIPRDG-VVGIIGQNGIGKSTVLRIL 130
Query: 124 AGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGN 183
AG+L PNLG+ + P++ +++ YFRG+ELQ YF ++ +KAI K QYVD +PK V+G
Sbjct: 131 AGELIPNLGKHDKEPNYDDVIKYFRGTELQEYFEKLKNKGVKAIHKVQYVDILPKVVKGK 190
Query: 184 VGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEP 243
VG +L + DE+ ++ L+L ++DR + LSGGELQR AIA ++N +IY FDEP
Sbjct: 191 VGDLLKKVDEKGKFDEVVEKLELKNILDRELSQLSGGELQRVAIAAAYLRNGDIYFFDEP 250
Query: 244 SSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPF 303
SS+LD++QR AA+++R L + V+VVEHDL VLDYLSD+I +YG P AYG+V++P
Sbjct: 251 SSWLDIRQRFNAARLIREL----NKVVVVEHDLIVLDYLSDYIHIMYGVPSAYGIVSMPK 306
Query: 304 SVREGINIFLAGFVPTENLRFRDESLTFRVAETPQESAEEIETYAR---YKYPTMVKTQG 360
SVR GIN +L G + EN+RFR E + F E I+ R Y +M KT G
Sbjct: 307 SVRVGINEYLYGELREENIRFRKEPIIF-------EKRAVIDFKNRPILLSYSSMKKTLG 359
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQ 420
+FKL+V G ++I +LG NG GKTTF+++LAG++KPD E ++ + VSYKPQ
Sbjct: 360 DFKLEVSGGTIYKGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGEVIKEGDIKVSYKPQ 417
Query: 421 KISPKFQSTVRHLLHQ--KIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVAL 478
I+P + TV LL I SY + S+++ PL +E+L+D+EV LSGGELQRVA+
Sbjct: 418 YITPDYDGTVEDLLSSITNIHTSY----YKSEIINPLQLEKLLDREVRELSGGELQRVAI 473
Query: 479 CLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRV 538
CL + ADIYL+DEPSA+LD EQR+ +KVI+R + FVV+HD + Y++DR
Sbjct: 474 AACLSRDADIYLLDEPSAFLDVEQRLRVSKVIRRIADEKEAGMFVVDHDILFQDYISDRF 533
Query: 539 IVYEGQPSVDCVANAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQKAAG 598
IV+ G+P V ++P + G N FL + ITFRRDP RPR NK S +D QK G
Sbjct: 534 IVFSGEPGKFGVGSSPMNKRDGANKFLKEMQITFRRDPETGRPRANKEGSQRDIMQKEKG 593
Query: 599 SYYYLDD 605
YYY+D+
Sbjct: 594 EYYYVDE 600
>sp|Q9M0D0|AB3E_ARATH ABC transporter E family member 3 OS=Arabidopsis thaliana GN=ABCE3
PE=2 SV=1
Length = 181
Score = 225 bits (573), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 118/175 (67%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 355 MVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDV-EIPEF 413
M T+G+FKL++ +GEFTDSQIIVMLGENGTGKTTFI+MLAG E S V EIP+F
Sbjct: 1 MTITRGDFKLRLNQGEFTDSQIIVMLGENGTGKTTFIKMLAGSKLDIDEEGSQVHEIPQF 60
Query: 414 NVSYKPQKISP-KFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGE 472
+VSYK Q +S KF+ TVR L+H+KI ++Y QFVSDVMKPL IE+LMD+ LSGGE
Sbjct: 61 SVSYKNQHMSNRKFEITVRDLIHRKIPNAYAEHQFVSDVMKPLKIEELMDKSFNKLSGGE 120
Query: 473 LQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHD 527
QRVAL LCLGK ADIYLIDEPSA+LDSEQRI+A+KVIKRFIL KK AF H+
Sbjct: 121 KQRVALALCLGKSADIYLIDEPSAFLDSEQRIIASKVIKRFILQMKKAAFARFHN 175
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 18/160 (11%)
Query: 104 QVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDN 163
Q++ ++G NG GK+T +K+LAG L EI + + Q+ R E
Sbjct: 21 QIIVMLGENGTGKTTFIKMLAG---SKLDIDEEGSQVHEIPQFSVSYKNQHMSNRKFEIT 77
Query: 164 LKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQ 223
++ +I + IP A E +D+ L + +++D++ LSGGE Q
Sbjct: 78 VRDLIHRK----IPNAYA-----------EHQFVSDVMKPLKIEELMDKSFNKLSGGEKQ 122
Query: 224 RFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLL 263
R A+A+ ++A+IY+ DEPS++LD +QR+ A++V++ +
Sbjct: 123 RVALALCLGKSADIYLIDEPSAFLDSEQRIIASKVIKRFI 162
>sp|Q73R11|Y282_TREDE Putative ABC transporter ATP-binding protein TDE_0282 OS=Treponema
denticola (strain ATCC 35405 / CIP 103919 / DSM 14222)
GN=TDE_0282 PE=3 SV=1
Length = 489
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 212/470 (45%), Gaps = 49/470 (10%)
Query: 97 LPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYF 156
L +P+ GQ + L G +G GK+T +++ G L P+ F + I+ E
Sbjct: 24 LHIPK-GQCVLLCGASGCGKTTLTRLING-LIPHF--FEGEFSGEAIINGMNSEEAD--- 76
Query: 157 TRILEDNLKAII---KPQY--VDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVID 211
L D++ + + Q+ D + V G + L + + DL + + +
Sbjct: 77 IAQLSDSVGTVFQNPRTQFFNTDTDSEIVFGLENRGLPPEQLLSRLEKVTEDLQIQNLRE 136
Query: 212 RNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIV 271
R++ +LSGGE Q+ A A V +I++ DEPSS +D + +++++ + +I+
Sbjct: 137 RSIFELSGGEKQKIAFASVYAAAPDIFVLDEPSSNMDYHSIKELSELIKKIKLQGKTIII 196
Query: 272 VEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTF 331
EH + L ++D + + G + ++ +++ A ++++ R +L
Sbjct: 197 AEHRIWYLMDIADRVIFMEN-----GKIAHDMDIKTFVDLPEA---QIKSMKLRCRNLAD 248
Query: 332 RVAETPQESAEEIETYARYKYPT---MVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKT 388
AET S + ++ + + VK L+ + T +II + GENG GKT
Sbjct: 249 VKAETVNVSPDVSVSFGGHTFAVKDITVKLGHTSVLQDISFSTTGGEIIAITGENGAGKT 308
Query: 389 TFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQKISPKFQSTVRHLL-----HQKIRDS-Y 442
T R L GL + + ++S+ +S K + +++ HQ DS Y
Sbjct: 309 TLARTLCGLTQEAA----------GSISFDGNPLSRKMRRERSYMVMQDVGHQLFTDSVY 358
Query: 443 THPQF---------VSDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDE 493
+ + +V+ L + +L ++ ++LSGG+ QR+A+ + + DI + DE
Sbjct: 359 AECRLGIKDLPDPAIDEVLTELSLNRLKERHPLSLSGGQKQRLAVAVSVLCGKDILIFDE 418
Query: 494 PSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEG 543
P++ LD + A ++IKR + KKT V+ HD + RV++ G
Sbjct: 419 PTSGLDLKSMQEAGRIIKR-LADDKKTVIVITHDIEFIKTICSRVLILSG 467
>sp|Q897I2|Y753_CLOTE Putative ABC transporter ATP-binding protein CTC_00753
OS=Clostridium tetani (strain Massachusetts / E88)
GN=CTC_00753 PE=3 SV=1
Length = 437
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 171/375 (45%), Gaps = 68/375 (18%)
Query: 198 ADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQ 257
+++ + L LN++ D+ ++SGGE QR AIA V + +I FDEP S LD + A +
Sbjct: 24 SEVISLLGLNKIRDKQTTEISGGEKQRVAIASVVSMDPQIIAFDEPISQLD---PISAEE 80
Query: 258 VVRSLLRPN----SYVIVVEHDLSVLDYLSDFICCL-------YGKP------------- 293
V+ S+ R N +I+VE L +++D I + G P
Sbjct: 81 VLNSIKRLNRDLGKTIILVEQRLDKCFHMADRIIFMENGEIIGQGTPKNIPENIVNKYHL 140
Query: 294 -------GAYGVVTLPFSVREGINIFLAGFVPTENLRFRD---ESLTFRVAETPQESAEE 343
G+ TLP +V+EG +I N +F+D + L F+ E E
Sbjct: 141 PTITYIFKEAGLQTLPITVKEGRDII-------RNNKFQDLKEDDLKFK------EVVME 187
Query: 344 IETYARYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLK--PD 401
IE ++Y K + K+ GE I+ ++GENG GK+T +++AG++
Sbjct: 188 IEKL-NFEYERGYKILKDLSFKLHRGE-----IMTVMGENGAGKSTLFKIIAGMIDKYKG 241
Query: 402 SVEDSDVEIPEFNVSYKPQKISPKFQSTVRHLLHQKIRD--SYT-------HPQFVSDVM 452
V + I + + +KI Q+ + + + + YT + V VM
Sbjct: 242 KVLIDNKNIKSLKLKERIKKIGYLSQNPNDYFGRKTVFEEVGYTLKNIGEYKEEKVEQVM 301
Query: 453 KPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKR 512
K L I L D+ +LSGGE QRVA+ + +I ++DEP+ +D+E + ++IK
Sbjct: 302 KLLNISYLEDKNPRDLSGGEKQRVAIACTIITDPEILILDEPTRGMDAEAKENLGEIIKT 361
Query: 513 FILHAKKTAFVVEHD 527
+ K+ V+ HD
Sbjct: 362 -LAEVGKSIVVITHD 375
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 48/224 (21%)
Query: 91 TFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGS 150
+FKLHR G+++ ++G NG GKST KI+AG ++ ++G
Sbjct: 206 SFKLHR------GEIMTVMGENGAGKSTLFKIIAG-----------------MIDKYKGK 242
Query: 151 EL---QNYFTRILEDNLKAIIKPQYVDHIPKAVQG-------------NVGQVLDQKDER 194
L +N + L++ +K I Y+ P G N+G+ ++K E+
Sbjct: 243 VLIDNKNIKSLKLKERIKKI---GYLSQNPNDYFGRKTVFEEVGYTLKNIGEYKEEKVEQ 299
Query: 195 DMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLK 254
MK L+++ + D+N DLSGGE QR AIA + + EI + DEP+ +D + +
Sbjct: 300 VMKL-----LNISYLEDKNPRDLSGGEKQRVAIACTIITDPEILILDEPTRGMDAEAKEN 354
Query: 255 AAQVVRSLLRPNSYVIVVEHDLSVL-DYLSDFICCLYGKPGAYG 297
+++++L ++V+ HD DY + G+ A G
Sbjct: 355 LGEIIKTLAEVGKSIVVITHDSDFAGDYSHSVMLMFNGEIVAKG 398
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%)
Query: 440 DSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLD 499
D T + VS+V+ L + ++ D++ +SGGE QRVA+ + I DEP + LD
Sbjct: 15 DINTMKRNVSEVISLLGLNKIRDKQTTEISGGEKQRVAIASVVSMDPQIIAFDEPISQLD 74
Query: 500 SEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYE 542
IKR KT +VE ++ADR+I E
Sbjct: 75 PISAEEVLNSIKRLNRDLGKTIILVEQRLDKCFHMADRIIFME 117
>sp|Q8PUE7|Y2387_METMA Putative ABC transporter ATP-binding protein MM_2387
OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647
/ Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_2387 PE=3 SV=1
Length = 498
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 203/488 (41%), Gaps = 72/488 (14%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLG-------RFNNPP----DWQEILTYFRG 149
+ G++L + G + GK+T +AG L +G F N D + L+ G
Sbjct: 27 KKGELLLVTGHSAAGKTTLALAMAGILHHEIGGKIEGNLSFKNRDIKEFDGIKELSRHTG 86
Query: 150 -----SELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDL 204
+E Q FT + E+ L + Y K +Q + +V++ LC
Sbjct: 87 MVFDDAESQLIFTTVEEEILSGLENRGYS---GKEIQRRLNEVME----------LC--- 130
Query: 205 DLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLR 264
++ + +R LSGG+ Q+ A+A + E+ + DE ++ LD + K V++ L
Sbjct: 131 EIGHLKERAPHTLSGGQKQKVALAATLALDTEVLILDEATAELDTEAVRKVFSVLKRLKE 190
Query: 265 PNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRF 324
+I+V+H++ + D + L + G + P A F
Sbjct: 191 AEKTIIIVDHNIEDFLEIGDRVVLL--EKGEIKAIKSP-----------ADFAAVS---- 233
Query: 325 RDESLTFRVAETPQESAEEIETYARYKYPTMVKTQGNFK-LKVVEGEFTDSQIIVMLGEN 383
D LT + ++ + S + E + + G F L ++ E +++ +LGEN
Sbjct: 234 EDTDLTSKSSK-KEYSCSQKERQPVISIKNLTQRYGEFNALDNLDLEIRSGELVAILGEN 292
Query: 384 GTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKP-----QKISPKFQSTVRHLLHQKI 438
G+GKTT ++ L GLL+P S +V + N S P + FQ+ L +
Sbjct: 293 GSGKTTLVKHLNGLLRPYS---GNVSVKGLNTSLTPVNELVKHTGLVFQNPDNMLFEDTV 349
Query: 439 RD---------SYTHPQFVSDVMKPLLIEQLMDQEVV---NLSGGELQRVALCLCLGKPA 486
T + + + L + L +E V +LS GE QR+A+ +
Sbjct: 350 EAEVAFGLNNIGITGSEAGDAIARSLELVNLKGKEKVFPRHLSRGERQRLAVACVIAMRP 409
Query: 487 DIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGQPS 546
++ ++DEP+ LD+E+ +++KR L T +V H+ + A+RVI
Sbjct: 410 ELIILDEPTTGLDAEESDRMMQLMKRLQLEG-HTILMVTHNMQIVKDHAERVIRMASGKI 468
Query: 547 VDCVANAP 554
V+ AN
Sbjct: 469 VEDSANGA 476
>sp|Q0S0X2|SSUB3_RHOSR Aliphatic sulfonates import ATP-binding protein SsuB 3
OS=Rhodococcus sp. (strain RHA1) GN=ssuB3 PE=3 SV=1
Length = 268
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 22/232 (9%)
Query: 337 PQESAEEIETYARYKYPTMVKTQGNFK-------LKVVEGEFTDSQIIVMLGENGTGKTT 389
P+E R P V G K L ++ E T + +V+LG +GTGKTT
Sbjct: 13 PRERTATTAAERRTGSPLAVSLSGVRKSFGDKTVLSGIDLEITRGEFVVLLGPSGTGKTT 72
Query: 390 FIRMLAGLLKPDSVEDSDVEIP-EFNVSYKPQKISPKFQSTVRHLLHQKIRDSYTHPQFV 448
+R+L+GL PD DV +P + V Y+ ++ P + + QK Q
Sbjct: 73 LLRLLSGLEPPDG---GDVLVPRQRTVVYQEPRLIPSKRVLANVSVGQK------RAQLT 123
Query: 449 SDVMKPLLIE-QLMDQE---VVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRI 504
D + L E L D+E LSGGE QRVAL L + ++ L+DEP A LD+ R+
Sbjct: 124 RDNARRALAEVNLADKERAWPATLSGGEAQRVALARALVREPELLLLDEPFAALDALTRL 183
Query: 505 VAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYE-GQPSVDCVANAPQ 555
++ + + +V HD A LADRV++ + G +VD + P+
Sbjct: 184 QMQDLVGDLVARHRPAVLLVTHDVDEAVRLADRVLILDNGGFAVDVDIDLPR 235
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILED 162
G+ + L+G +G GK+T L++L+G PPD ++L + + +
Sbjct: 57 GEFVVLLGPSGTGKTTLLRLLSGL---------EPPDGGDVLVPRQRTVVYQ-------- 99
Query: 163 NLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGD------ 216
+P+ + K V NV + QK +A L D + + N+ D
Sbjct: 100 ------EPRLIPS--KRVLANVS--VGQK-----RAQLTRDNARRALAEVNLADKERAWP 144
Query: 217 --LSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLL-RPNSYVIVVE 273
LSGGE QR A+A V+ E+ + DEP + LD RL+ +V L+ R V++V
Sbjct: 145 ATLSGGEAQRVALARALVREPELLLLDEPFAALDALTRLQMQDLVGDLVARHRPAVLLVT 204
Query: 274 HDLSVLDYLSDFICCL 289
HD+ L+D + L
Sbjct: 205 HDVDEAVRLADRVLIL 220
>sp|Q8TQW9|Y1418_METAC Putative ABC transporter ATP-binding protein MA_1418
OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM
2834 / JCM 12185 / C2A) GN=MA_1418 PE=3 SV=1
Length = 528
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 113/472 (23%), Positives = 210/472 (44%), Gaps = 40/472 (8%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLG-RFNNPPDWQEI-LTYFRG-SELQNYFT 157
R G++L + G + GK+T +AG L +G + +Q + F G EL +
Sbjct: 27 RKGELLLVTGHSAAGKTTLALAMAGILHHEIGGKIEGNISFQSRDVKEFDGIKELSRHIG 86
Query: 158 RILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKA-DLCTDLDLNQVIDRNVGD 216
+ +D +I + I ++ N G + R +A D C LN +R
Sbjct: 87 VVFDDAESQLIFTTVEEEIFSGLE-NRGHPEKEMVRRSKEAMDFCAISHLN---NRAPHM 142
Query: 217 LSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDL 276
LSGG+ Q+ A+A + E+ + DE ++ LD + K V++ L +I+++H++
Sbjct: 143 LSGGQKQKVALAATLALDTEVLILDEATAELDSQAVRKVFSVLKRLKDAGKTIIIIDHNI 202
Query: 277 SVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFRVAET 336
+ D + L + G + P + + + + + D L+ R AE
Sbjct: 203 EDFLEIGDRVVLL--EKGEIKAIKSPSEFTSKSSDLTSTNLTSTSALQTDLPLS-RTAEQ 259
Query: 337 PQESAEEIETYARYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAG 396
P S + + +Y ++ N L++ GE ++ +LGENG+GKTT ++ G
Sbjct: 260 PIISVKNL----TQRYGEILALD-NIDLEIYPGE-----LVAILGENGSGKTTLVKHFNG 309
Query: 397 LLKPDS-------VEDSDVEIPEFN-----VSYKPQKISPKFQSTVRHLLHQKIRD-SYT 443
LL+P S +E S I E V P + F+ TV ++ + +
Sbjct: 310 LLRPYSGKVTVKGLETSTTPINELVKHTGLVFQNPDNM--LFEDTVEAEINFGLNNIGVK 367
Query: 444 HPQFVSDVMKPLLIEQLMDQEVV---NLSGGELQRVALCLCLGKPADIYLIDEPSAYLDS 500
P+ V +++ L + L D++ V +LS GE QR+A+ + ++ ++DEP+ LD+
Sbjct: 368 GPEAVGAILRSLELVNLNDKQKVFPRHLSRGERQRLAVACIIAMKPELIVLDEPTTGLDA 427
Query: 501 EQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGQPSVDCVAN 552
E+ +++++ + T +V H+ + +RVI E V+ AN
Sbjct: 428 EESDRMMQLMRK-LQQEGHTIVMVTHNLQIVRDHVERVIRMESGKVVEDSAN 478
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 21/220 (9%)
Query: 81 KDTTHRYGPNTFKLHRLPVP-RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFN---- 135
K+ T RYG L + + PG+++ ++G NG GK+T +K G L+P G+
Sbjct: 265 KNLTQRYG-EILALDNIDLEIYPGELVAILGENGSGKTTLVKHFNGLLRPYSGKVTVKGL 323
Query: 136 --NPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDE 193
+ E++ + G QN + ED ++A I +++I VG +L
Sbjct: 324 ETSTTPINELVKH-TGLVFQNPDNMLFEDTVEAEINFG-LNNIGVKGPEAVGAIL----- 376
Query: 194 RDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRL 253
R + +L D +V R+ LS GE QR A+A + E+ + DEP++ LD ++
Sbjct: 377 RSL--ELVNLNDKQKVFPRH---LSRGERQRLAVACIIAMKPELIVLDEPTTGLDAEESD 431
Query: 254 KAAQVVRSLLRPNSYVIVVEHDLSVL-DYLSDFICCLYGK 292
+ Q++R L + +++V H+L ++ D++ I GK
Sbjct: 432 RMMQLMRKLQQEGHTIVMVTHNLQIVRDHVERVIRMESGK 471
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 346 TYARYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPD---- 401
TY P + N L++ +GE ++++ G + GKTT +AG+L +
Sbjct: 10 TYGTAAIPAL----KNINLEIRKGE-----LLLVTGHSAAGKTTLALAMAGILHHEIGGK 60
Query: 402 -----SVEDSDVEIPEFN-VSYKPQKISPKFQSTVRHLLHQKIR-------DSYTHPQ-- 446
S + DV+ EF+ + + I F L+ + ++ HP+
Sbjct: 61 IEGNISFQSRDVK--EFDGIKELSRHIGVVFDDAESQLIFTTVEEEIFSGLENRGHPEKE 118
Query: 447 ---FVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQR 503
+ M I L ++ LSGG+ Q+VAL L ++ ++DE +A LDS+
Sbjct: 119 MVRRSKEAMDFCAISHLNNRAPHMLSGGQKQKVALAATLALDTEVLILDEATAELDSQAV 178
Query: 504 IVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYE 542
V+KR + A KT +++H+ + DRV++ E
Sbjct: 179 RKVFSVLKR-LKDAGKTIIIIDHNIEDFLEIGDRVVLLE 216
>sp|Q2YKR8|UGPC_BRUA2 sn-glycerol-3-phosphate import ATP-binding protein UgpC OS=Brucella
abortus (strain 2308) GN=ugpC PE=3 SV=1
Length = 351
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 18/196 (9%)
Query: 360 GNFK-LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEF---NV 415
GN + +K V E D + +V++G +G GK+T +RM+AGL +S+ + I E NV
Sbjct: 15 GNIEVIKGVSLEIADGEFVVLVGPSGCGKSTLLRMIAGL---ESITSGTISIGERVVNNV 71
Query: 416 SYKPQKISPKFQS-------TVRHLLHQKIRDSYTHPQ----FVSDVMKPLLIEQLMDQE 464
+ I+ FQ+ TVR L +++ T + ++ K L IEQ ++++
Sbjct: 72 EPAERDIAMVFQNYALYPHMTVRENLAYGLKNRKTPKEEIERRIAKAAKALEIEQFLERK 131
Query: 465 VVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVV 524
LSGG+ QRVA+ + + +L DEP + LD++ R+ IKR T+ V
Sbjct: 132 PRQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYV 191
Query: 525 EHDFIMATYLADRVIV 540
HD + A +ADR++V
Sbjct: 192 THDQMEAMTMADRLVV 207
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 31/242 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRF--------NNPPDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G N P ++I F+ L
Sbjct: 30 GEFVVLVGPSGCGKSTLLRMIAGLESITSGTISIGERVVNNVEPAERDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + +NL +K + PK ++ + R KA L++ Q ++R
Sbjct: 90 HMT--VRENLAYGLKNR---KTPK----------EEIERRIAKA--AKALEIEQFLERKP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVE 273
LSGG+ QR A+ V+ ++FDEP S LD K R++ ++ L R + + V
Sbjct: 133 RQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFV--PTENLRFRDESLT 330
HD ++D + L G V P + E + F+A F+ P+ NL ES
Sbjct: 193 HDQMEAMTMADRLVVL--NAGHIEQVGTPIELYEKPASTFVATFIGSPSMNLLQSPESAP 250
Query: 331 FR 332
++
Sbjct: 251 WQ 252
>sp|Q8FW07|UGPC_BRUSU sn-glycerol-3-phosphate import ATP-binding protein UgpC OS=Brucella
suis biovar 1 (strain 1330) GN=ugpC PE=3 SV=1
Length = 351
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 18/196 (9%)
Query: 360 GNFK-LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEF---NV 415
GN + +K V E D + +V++G +G GK+T +RM+AGL +S+ + I E NV
Sbjct: 15 GNIEVIKGVSLEIADGEFVVLVGPSGCGKSTLLRMIAGL---ESITSGTISIGERVVNNV 71
Query: 416 SYKPQKISPKFQS-------TVRHLLHQKIRDSYTHPQ----FVSDVMKPLLIEQLMDQE 464
+ I+ FQ+ TVR L +++ T + ++ K L IEQ ++++
Sbjct: 72 EPAERDIAMVFQNYALYPHMTVRENLAYGLKNRKTPKEEIERRIAKAAKALEIEQFLERK 131
Query: 465 VVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVV 524
LSGG+ QRVA+ + + +L DEP + LD++ R+ IKR T+ V
Sbjct: 132 PRQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYV 191
Query: 525 EHDFIMATYLADRVIV 540
HD + A +ADR++V
Sbjct: 192 THDQMEAMTMADRLVV 207
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 31/242 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRF--------NNPPDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G N P ++I F+ L
Sbjct: 30 GEFVVLVGPSGCGKSTLLRMIAGLESITSGTISIGERVVNNVEPAERDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + +NL +K + PK ++ + R KA L++ Q ++R
Sbjct: 90 HMT--VRENLAYGLKNR---KTPK----------EEIERRIAKA--AKALEIEQFLERKP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVE 273
LSGG+ QR A+ V+ ++FDEP S LD K R++ ++ L R + + V
Sbjct: 133 RQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFV--PTENLRFRDESLT 330
HD ++D + L G V P + E + F+A F+ P+ NL ES
Sbjct: 193 HDQMEAMTMADRLVVL--NAGHIEQVGTPIELYEKPASTFVATFIGSPSMNLLQSPESAA 250
Query: 331 FR 332
++
Sbjct: 251 WQ 252
>sp|Q578E9|UGPC_BRUAB sn-glycerol-3-phosphate import ATP-binding protein UgpC OS=Brucella
abortus biovar 1 (strain 9-941) GN=ugpC PE=3 SV=1
Length = 351
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 18/196 (9%)
Query: 360 GNFK-LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEF---NV 415
GN + +K V E D + +V++G +G GK+T +RM+AGL +S+ + I E NV
Sbjct: 15 GNIEVIKGVSLEIADGEFVVLVGPSGCGKSTLLRMIAGL---ESITSGTISIGERVVNNV 71
Query: 416 SYKPQKISPKFQS-------TVRHLLHQKIRDSYTHPQ----FVSDVMKPLLIEQLMDQE 464
+ I+ FQ+ TVR L +++ T + ++ K L IEQ ++++
Sbjct: 72 EPAERDIAMVFQNYALYPHMTVRENLAYGLKNRKTPKEEIERRIAKAAKALEIEQFLERK 131
Query: 465 VVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVV 524
LSGG+ QRVA+ + + +L DEP + LD++ R+ IKR T+ V
Sbjct: 132 PRQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYV 191
Query: 525 EHDFIMATYLADRVIV 540
HD + A +ADR++V
Sbjct: 192 THDQMEAMTMADRLVV 207
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 31/242 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRF--------NNPPDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G N P ++I F+ L
Sbjct: 30 GEFVVLVGPSGCGKSTLLRMIAGLESITSGTISIGERVVNNVEPAERDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + +NL +K + PK ++ + R KA L++ Q ++R
Sbjct: 90 HMT--VRENLAYGLKNR---KTPK----------EEIERRIAKA--AKALEIEQFLERKP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVE 273
LSGG+ QR A+ V+ ++FDEP S LD K R++ ++ L R + + V
Sbjct: 133 RQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFV--PTENLRFRDESLT 330
HD ++D + L G V P + E + F+A F+ P+ NL ES
Sbjct: 193 HDQMEAMTMADRLVVL--NAGHIEQVGTPIELYEKPASTFVATFIGSPSMNLLQSPESAA 250
Query: 331 FR 332
++
Sbjct: 251 WQ 252
>sp|Q1M589|UGPC3_RHIL3 sn-glycerol-3-phosphate import ATP-binding protein UgpC 3
OS=Rhizobium leguminosarum bv. viciae (strain 3841)
GN=ugpC3 PE=3 SV=1
Length = 348
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 17/194 (8%)
Query: 364 LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKP---Q 420
+K + D ++IV++G +G GK+T +RM+AGL +++ + VEI NV+ +
Sbjct: 19 VKGINLSVADGELIVLVGPSGCGKSTLLRMIAGL---ETISEGHVEIAGRNVNKAEPADR 75
Query: 421 KISPKFQS-------TVRHLLHQKIRDSYTH----PQFVSDVMKPLLIEQLMDQEVVNLS 469
I+ FQ+ TVR L +++ T + V++ + L I ++D++ LS
Sbjct: 76 DIAMVFQNYALYPHMTVRGNLEYGLKNRGTERAEINRRVAEAAEILEIGPMLDRKPRELS 135
Query: 470 GGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFI 529
GG+ QRVA+ + + +L DEP + LD++ R+ I+R K T+ V HD +
Sbjct: 136 GGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIRRLQRRLKTTSIYVTHDQL 195
Query: 530 MATYLADRVIVYEG 543
A LADR++V G
Sbjct: 196 EAMTLADRLVVMNG 209
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 31/232 (13%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFN--------NPPDWQEILTYFRGSELQN 154
G+++ LVG +G GKST L+++AG + G P ++I F+ L
Sbjct: 29 GELIVLVGPSGCGKSTLLRMIAGLETISEGHVEIAGRNVNKAEPADRDIAMVFQNYALYP 88
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + NL+ +K N G + + R A+ L++ ++DR
Sbjct: 89 HMT--VRGNLEYGLK-------------NRGTERAEINRR--VAEAAEILEIGPMLDRKP 131
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVE 273
+LSGG+ QR A+ V+ ++FDEP S LD K R++ +R L R + I V
Sbjct: 132 RELSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIRRLQRRLKTTSIYVT 191
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVRE-GINIFLAGFV--PTENL 322
HD L+D + + G G V P +V + ++F+A F+ P NL
Sbjct: 192 HDQLEAMTLADRLVVMNG--GLVEQVGTPVAVYDRPASLFVASFIGSPPMNL 241
>sp|Q7NRX5|UGPC_CHRVO sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Chromobacterium violaceum (strain ATCC 12472 / DSM
30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
GN=ugpC PE=3 SV=1
Length = 370
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 35/240 (14%)
Query: 364 LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSY---KPQ 420
L+ + E D + +V++G +G GK+T +RM+AGL +S ED ++ I E V+ K +
Sbjct: 21 LEEISAEIADGEFVVIVGPSGCGKSTLLRMVAGL---ESTEDGEIRIGERLVNQLEPKDR 77
Query: 421 KISPKFQSTVRHLLHQKIRDSYTHP------------QFVSDVMKPLLIEQLMDQEVVNL 468
I+ FQ+ + H + ++ + + V V L +EQL+ ++ L
Sbjct: 78 DIAMVFQNYALYP-HMTVAENMGYALKLKGLKKVEIMERVLKVAAVLELEQLLQRKPREL 136
Query: 469 SGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDF 528
SGG+ QRVA+ + + ++L DEP + LD++ R I+R T+ V HD
Sbjct: 137 SGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRGQMRLEIQRLHRRLATTSLYVTHDQ 196
Query: 529 IMATYLADRVIVYE-------GQPSVDCVANAPQSLLT-------GMNLFLSHLDITFRR 574
+ A LADRVIV G P D + + P + GMNLF + D + R
Sbjct: 197 VEAMTLADRVIVLNKGHIEQIGAP--DEIYDRPATAFVAAFMGSPGMNLFDAQADESGER 254
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILED 162
G+ + +VG +G GKST L+++AG + D + + G L N +D
Sbjct: 31 GEFVVIVGPSGCGKSTLLRMVAG--------LESTEDGEIRI----GERLVNQLEP--KD 76
Query: 163 NLKAIIKPQYVDHIPKAVQGNVGQVLDQKD-------ERDMKADLCTDLDLNQVIDRNVG 215
A++ Y + V N+G L K ER +K + L+L Q++ R
Sbjct: 77 RDIAMVFQNYALYPHMTVAENMGYALKLKGLKKVEIMERVLK--VAAVLELEQLLQRKPR 134
Query: 216 DLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVK----QRLKAAQVVRSLLRPNSYVIV 271
+LSGG+ QR A+ V+ +++FDEP S LD K RL+ ++ R L + YV
Sbjct: 135 ELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRGQMRLEIQRLHRRLATTSLYVT- 193
Query: 272 VEHDLSVLDYLSDFICCL 289
HD L+D + L
Sbjct: 194 --HDQVEAMTLADRVIVL 209
>sp|Q8YCB1|UGPC_BRUME sn-glycerol-3-phosphate import ATP-binding protein UgpC OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=ugpC PE=3 SV=1
Length = 351
Score = 82.8 bits (203), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 18/196 (9%)
Query: 360 GNFK-LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEF---NV 415
GN + +K V E D + +V++G +G GK+T +RM+AGL +S+ + I E NV
Sbjct: 15 GNIEVIKGVSLEIADGEFVVLVGPSGCGKSTLLRMIAGL---ESITSGTISIGERVVNNV 71
Query: 416 SYKPQKISPKFQS-------TVRHLLHQKIRDSYTHPQ----FVSDVMKPLLIEQLMDQE 464
+ I+ FQ+ TVR L +++ T + ++ K L IEQ ++++
Sbjct: 72 EPAERDIAMVFQNYALYPHMTVRENLAYGLKNRKTPKEEIERRIAKAAKVLEIEQFLERK 131
Query: 465 VVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVV 524
LSGG+ QRVA+ + + +L DEP + LD++ R+ IKR T+ V
Sbjct: 132 PRQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYV 191
Query: 525 EHDFIMATYLADRVIV 540
HD + A +ADR++V
Sbjct: 192 THDQMEAMTMADRLVV 207
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 31/242 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRF--------NNPPDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G N P ++I F+ L
Sbjct: 30 GEFVVLVGPSGCGKSTLLRMIAGLESITSGTISIGERVVNNVEPAERDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + +NL +K + PK ++ + R KA L++ Q ++R
Sbjct: 90 HMT--VRENLAYGLKNR---KTPK----------EEIERRIAKA--AKVLEIEQFLERKP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVE 273
LSGG+ QR A+ V+ ++FDEP S LD K R++ ++ L R + + V
Sbjct: 133 RQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRSLGTTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFV--PTENLRFRDESLT 330
HD ++D + L G V P + E +IF+A F+ P+ NL ES
Sbjct: 193 HDQMEAMTMADRLVVL--NAGHIEQVGTPIELYEKPASIFVATFIGSPSMNLLQSPESAA 250
Query: 331 FR 332
++
Sbjct: 251 WQ 252
>sp|Q92G36|ZNUC_RICCN Zinc import ATP-binding protein ZnuC OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=znuC PE=3 SV=1
Length = 233
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Query: 351 KYPTMVKTQGNFKLKVVEGEFT--DSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDV 408
++ + K GN KL + FT + I ++G NG GKTT +R++ GL KP S E +
Sbjct: 7 EFRNVSKKFGN-KLPINNVSFTVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEI--I 63
Query: 409 EIPEFNVSYKPQK--ISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVV 466
P+ + Y PQK ++P TV++ L ++ + + ++ + +E + DQE+
Sbjct: 64 IDPKLKIGYVPQKFGLTPDLPITVKNFLELLAPSNFNNN--IKEINSFIDLEHIKDQEIS 121
Query: 467 NLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEH 526
LSGG+ Q+V L + D+ ++DEP LD + ++I T F++ H
Sbjct: 122 KLSGGQFQKVVLACSIVNNPDLIILDEPLQSLDVTSQQEFYQLINLIRKKLNITVFMISH 181
Query: 527 DFIMATYLADRVIVYEGQPSVDCVAN--APQS----LLTGMNLFLSHLD 569
D +D+VI G + N P S L+ + + H D
Sbjct: 182 DLFTVIKNSDQVICLNGHICCSGIPNEITPNSEFSNALSALGFYTHHHD 230
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRIL 160
+ + L+G NG GK+T ++++ G KP G I+
Sbjct: 29 KKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEI------------------------II 64
Query: 161 EDNLKAIIKPQ---YVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDL 217
+ LK PQ +P V+ N ++L + + ++ + +DL + D+ + L
Sbjct: 65 DPKLKIGYVPQKFGLTPDLPITVK-NFLELLAPSNFNNNIKEINSFIDLEHIKDQEISKL 123
Query: 218 SGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP--NSYVIVVEHD 275
SGG+ Q+ +A V N ++ + DEP LDV + + Q++ +L+R N V ++ HD
Sbjct: 124 SGGQFQKVVLACSIVNNPDLIILDEPLQSLDVTSQQEFYQLI-NLIRKKLNITVFMISHD 182
Query: 276 LSVLDYLSDFICCLYGKPGAYGV 298
L + SD + CL G G+
Sbjct: 183 LFTVIKNSDQVICLNGHICCSGI 205
>sp|Q98G42|UGPC_RHILO sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Rhizobium loti (strain MAFF303099) GN=ugpC PE=3 SV=1
Length = 366
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 28/202 (13%)
Query: 363 KLKVVEG---EFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKP 419
K +VV G +F + +V+LG +G GK+T +RM+AGL + + D ++ I V+
Sbjct: 15 KTQVVHGVDLDFASGEFVVILGPSGCGKSTLLRMIAGL---EEISDGEISIDGTVVN--- 68
Query: 420 QKISPK-------FQS-----------TVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLM 461
K+ P+ FQ+ + + L S Q + V + L +E L+
Sbjct: 69 -KLEPRERGCAMVFQNYALYPHMSVAQNIGYSLKVAGVPSAERTQRIQAVARTLELEHLL 127
Query: 462 DQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTA 521
D++ + LSGG+ QRVA+ + + ++L DEP + LD++ R+ I++ T+
Sbjct: 128 DRKPMALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLDAKLRVQMRSEIRKLHRRLNATS 187
Query: 522 FVVEHDFIMATYLADRVIVYEG 543
V HD + A LADR++V G
Sbjct: 188 VFVTHDQVEAMTLADRLVVMNG 209
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILED 162
G+ + ++G +G GKST L+++AG + + G + + LE
Sbjct: 29 GEFVVILGPSGCGKSTLLRMIAGLEEISDGEIS----------------IDGTVVNKLEP 72
Query: 163 NLK--AIIKPQYVDHIPKAVQGNVGQVLD----QKDERDMKAD-LCTDLDLNQVIDRNVG 215
+ A++ Y + +V N+G L ER + + L+L ++DR
Sbjct: 73 RERGCAMVFQNYALYPHMSVAQNIGYSLKVAGVPSAERTQRIQAVARTLELEHLLDRKPM 132
Query: 216 DLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVEH 274
LSGG+ QR A+ ++ ++++FDEP S LD K R++ +R L R N+ + V H
Sbjct: 133 ALSGGQRQRVAMGRAMIREPKVFLFDEPLSNLDAKLRVQMRSEIRKLHRRLNATSVFVTH 192
Query: 275 DLSVLDYLSDFICCLYG 291
D L+D + + G
Sbjct: 193 DQVEAMTLADRLVVMNG 209
>sp|Q2K1C8|UGPC3_RHIEC sn-glycerol-3-phosphate import ATP-binding protein UgpC 3
OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ugpC3
PE=3 SV=1
Length = 348
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 102/197 (51%), Gaps = 22/197 (11%)
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVS-YKP 419
L V +GEF IV++G +G GK+T +RM+AGL +S+ VEI NV+ +P
Sbjct: 21 GINLAVADGEF-----IVLVGPSGCGKSTLLRMIAGL---ESITGGRVEIGGRNVNKAEP 72
Query: 420 QK--ISPKFQS-------TVRHLLHQKIRDSYTH----PQFVSDVMKPLLIEQLMDQEVV 466
+ I+ FQ+ TVR L +++ T + V + L I ++D++
Sbjct: 73 AERDIAMVFQNYALYPHMTVRGNLEYGLKNRGTARAEIDRRVKEAADILEIGPMLDRKPR 132
Query: 467 NLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEH 526
LSGG+ QRVA+ + + +L DEP + LD++ R+ I+R K T+ V H
Sbjct: 133 ELSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIRRLQRRLKTTSIYVTH 192
Query: 527 DFIMATYLADRVIVYEG 543
D + A LADR++V G
Sbjct: 193 DQLEAMTLADRLVVMNG 209
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 139/326 (42%), Gaps = 43/326 (13%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFN--------NPPDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG GR P ++I F+ L
Sbjct: 29 GEFIVLVGPSGCGKSTLLRMIAGLESITGGRVEIGGRNVNKAEPAERDIAMVFQNYALYP 88
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + NL+ +K N G + D R +A L++ ++DR
Sbjct: 89 HMT--VRGNLEYGLK-------------NRGTARAEIDRRVKEA--ADILEIGPMLDRKP 131
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVE 273
+LSGG+ QR A+ V+ ++FDEP S LD K R++ +R L R + I V
Sbjct: 132 RELSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIRRLQRRLKTTSIYVT 191
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGF--------VPTENLRF 324
HD L+D + + G G V P V + ++F+AGF VP E
Sbjct: 192 HDQLEAMTLADRLVVMNG--GLVEQVGTPVEVYDRPASLFVAGFIGSPPMNLVPIEVFHA 249
Query: 325 RDESLTFRVAETPQESAEEIETYARYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLGENG 384
+ T + E + K P + N ++++E +S + V LGE
Sbjct: 250 TESGGTLALPEGTDMVGLRPDALLLEK-PAEPSIRLNAIVELLEPIGGESHLHVRLGE-- 306
Query: 385 TGKTTFIRMLAGLLKPDSVEDSDVEI 410
G+ T + + G +PD E + +++
Sbjct: 307 -GQQTIVLTVQG--RPDFAESARIDV 329
>sp|Q5NN23|SSUB_ZYMMO Aliphatic sulfonates import ATP-binding protein SsuB OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=ssuB PE=3 SV=1
Length = 240
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 355 MVKTQGNFK----LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKP-------DSV 403
+ K + NF LK V+ + Q + ++GE+G GK+T +R+++ L +P D
Sbjct: 8 LSKLRKNFGTVEVLKDVDIAIPEGQFVALVGESGCGKSTLLRLISHLERPTSGQLLIDGK 67
Query: 404 EDSDVEIPEFNVSYKPQKISPKFQSTVRHL-LHQKIRDSYTHPQFVSDVMKPLLIEQLMD 462
E + P ++ ++ P ++S + ++ L K RD T + + V L+D
Sbjct: 68 ERRKIN-PSVRYLFQEARLLP-WRSVLDNVRLGAKDRDKKTARESLESV-------NLLD 118
Query: 463 QEVVN---LSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKK 519
+E LSGG+ QRV+L L I L+DEP LD+ R+ K+I+ L K
Sbjct: 119 KENEWPEILSGGQCQRVSLARALAGKPKILLLDEPLGALDALTRVQMQKLIESLWLEQKF 178
Query: 520 TAFVVEHDFIMATYLADRVIVYE-GQPSVD 548
T +V HD A YLADRVI E GQ +D
Sbjct: 179 TVLLVTHDVSEAVYLADRVIALEKGQIGLD 208
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQ--NYFTRIL 160
GQ + LVG +G GKST L++++ +P G+ G E + N R L
Sbjct: 31 GQFVALVGESGCGKSTLLRLISHLERPTSGQL-----------LIDGKERRKINPSVRYL 79
Query: 161 EDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGD--LS 218
+ + +D++ L KD RD K + +N + N LS
Sbjct: 80 FQEARLLPWRSVLDNVR----------LGAKD-RDKKTARESLESVNLLDKENEWPEILS 128
Query: 219 GGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSY-VIVVEHDLS 277
GG+ QR ++A +I + DEP LD R++ +++ SL + V++V HD+S
Sbjct: 129 GGQCQRVSLARALAGKPKILLLDEPLGALDALTRVQMQKLIESLWLEQKFTVLLVTHDVS 188
Query: 278 VLDYLSDFICCL-YGKPGAYGVVTLP 302
YL+D + L G+ G + LP
Sbjct: 189 EAVYLADRVIALEKGQIGLDREIPLP 214
>sp|Q0BUR6|SSUB_GRABC Aliphatic sulfonates import ATP-binding protein SsuB
OS=Granulibacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1) GN=ssuB PE=3 SV=1
Length = 238
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFN-VSYKP 419
L + GEF + +LG +G+GKTT +R+LAGL D+ + +PE V ++
Sbjct: 24 GLSLDIAPGEF-----VALLGRSGSGKTTLLRLLAGL---DTPSQGHLRLPERRAVVFQE 75
Query: 420 QKISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALC 479
++ P +++ R+++ ++D T V + ++ + + D + LSGGE QR L
Sbjct: 76 PRLLP-WKNVWRNVV-LGVKDRPTRDHAV-EALREVELAHRADAWPLTLSGGEAQRAGLA 132
Query: 480 LCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVI 539
L + ++ L+DEP A LD+ R+ ++ R + +V HD A LADRV+
Sbjct: 133 RALVRSPELLLLDEPFAALDALTRLRMQSLVARLWEVHRTAVLLVTHDVDEALLLADRVV 192
Query: 540 VYE 542
V E
Sbjct: 193 VLE 195
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 31/215 (14%)
Query: 102 PGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILE 161
PG+ + L+G +G GK+T L++LAG P+ G P + F+ L +
Sbjct: 31 PGEFVALLGRSGSGKTTLLRLLAGLDTPSQGHLRLP---ERRAVVFQEPRLLPW------ 81
Query: 162 DNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDE--RDMKADLCTDLDLNQVIDRNVGDLSG 219
K V NV VL KD RD + +++L D LSG
Sbjct: 82 ----------------KNVWRNV--VLGVKDRPTRDHAVEALREVELAHRADAWPLTLSG 123
Query: 220 GELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPN-SYVIVVEHDLSV 278
GE QR +A V++ E+ + DEP + LD RL+ +V L + + V++V HD+
Sbjct: 124 GEAQRAGLARALVRSPELLLLDEPFAALDALTRLRMQSLVARLWEVHRTAVLLVTHDVDE 183
Query: 279 LDYLSDFICCL-YGKPGAYGVVTLPFSVREGINIF 312
L+D + L +G+ A +++P R G F
Sbjct: 184 ALLLADRVVVLEHGRIAAERTISIPRPRRPGDAAF 218
>sp|Q8UB29|UGPC3_AGRT5 sn-glycerol-3-phosphate import ATP-binding protein UgpC 3
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=ugpC3 PE=3 SV=1
Length = 353
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 14/194 (7%)
Query: 360 GNFK-LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGL--------LKPDSVEDSDVEI 410
GN + +K V E D ++IV++G +G GK+T +RM+AGL + D V + D+E
Sbjct: 15 GNVEAIKSVSMEIADGEMIVLVGPSGCGKSTLLRMIAGLEGISGGQIMIGDRVVN-DLEP 73
Query: 411 PEFNVSYKPQKISPKFQSTVRHLLHQKIRDSYTHPQ----FVSDVMKPLLIEQLMDQEVV 466
+ +++ Q + TVR L +++ T + +++ K L IEQ ++++
Sbjct: 74 SDRDIAMVFQNYALYPHMTVRQNLAYGLKNRNTPKEEIERRITEAAKALEIEQFLERKPR 133
Query: 467 NLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEH 526
LSGG+ QRVA+ + + +L DEP + LD++ R+ I+R T+ V H
Sbjct: 134 QLSGGQRQRVAMGRAIVRKPAAFLFDEPLSNLDAKLRVQMRVEIRRLQRSLATTSVYVTH 193
Query: 527 DFIMATYLADRVIV 540
D + A LADR++V
Sbjct: 194 DQMEAMTLADRLVV 207
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 32/255 (12%)
Query: 81 KDTTHRYGPNTFKLHRLPVP-RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRF----- 134
KD YG N + + + G+++ LVG +G GKST L+++AG + G+
Sbjct: 7 KDVRKVYGGNVEAIKSVSMEIADGEMIVLVGPSGCGKSTLLRMIAGLEGISGGQIMIGDR 66
Query: 135 ---NNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQK 191
+ P ++I F+ L + T + NL +K + + PK ++
Sbjct: 67 VVNDLEPSDRDIAMVFQNYALYPHMT--VRQNLAYGLKNR---NTPK-----------EE 110
Query: 192 DERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQ 251
ER + + L++ Q ++R LSGG+ QR A+ V+ ++FDEP S LD K
Sbjct: 111 IERRI-TEAAKALEIEQFLERKPRQLSGGQRQRVAMGRAIVRKPAAFLFDEPLSNLDAKL 169
Query: 252 RLKAAQVVRSLLRP-NSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-I 309
R++ +R L R + + V HD L+D + L G + P + E
Sbjct: 170 RVQMRVEIRRLQRSLATTSVYVTHDQMEAMTLADRLVVL--NAGRIEQMGTPIELYEKPA 227
Query: 310 NIFLAGFV--PTENL 322
F+A F+ P+ NL
Sbjct: 228 TTFVATFIGSPSMNL 242
>sp|Q97WT4|Y2030_SULSO Putative ABC transporter ATP-binding protein SSO2030 OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=SSO2030 PE=3 SV=1
Length = 530
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 208/487 (42%), Gaps = 61/487 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRG------SELQNYF 156
G+ + + G +G GKST + ++ G + P+L N E+ + E+ Y
Sbjct: 31 GESVLITGRSGSGKSTLVSVINGVI-PHL---INAEIKGEVRVFGFDVKSTPIHEISKYV 86
Query: 157 TRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDL-DLNQVIDRNVG 215
+L+D +D + V+ + +DE + + + ++ + DR +
Sbjct: 87 GTLLQDPDTQAFNYTIIDEVAFGVE----NYMISRDEMIERVEESMKIYGISHLRDREIN 142
Query: 216 DLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHD 275
LSGGELQR +A V + + DEP+S +D + + ++V++ +++VEH
Sbjct: 143 TLSGGELQRTILASVLAMRPKALILDEPTSNIDPQGTREILELVKTFRSEGISLVLVEHK 202
Query: 276 LS-VLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFRVA 334
+ VL ++ I GK + VR+ + A F+ + L D L +
Sbjct: 203 IERVLPFVDRIIVVEEGK--------IAVDVRKDEIVDKADFLYSLGLEIPDYMLFLKKN 254
Query: 335 ETPQESAEEIETYARYKYPTMVKTQG-----NFKLKVVEG--------EFTDSQIIVMLG 381
+ E + Y+ P+ + +G + K+K G I ++G
Sbjct: 255 GFRKIDYEYLRKTYTYRPPSRIGGKGEALYASVKVKTKNGIYLINTKISLKQGTITALMG 314
Query: 382 ENGTGKTTFIRMLAGLL--KPDSVEDSDVEIPEFNVS------------YKPQKISPKF- 426
+NG+GKTT ++++ GL+ K VE+ V + ++S Y PQ F
Sbjct: 315 KNGSGKTTLLKVIVGLIDKKRLIVEEEKVIVNGVDLSKTKLVERGKFIAYLPQFFDVMFI 374
Query: 427 QSTVRHLLHQKIRDSYTHPQ-FVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKP 485
+ TV + +++ T+ + + +V+K ++ ++ + LS G+ +RVA+ L
Sbjct: 375 KRTVEDEIKFSMKNRGTYDEKRLGEVLKMFSLDAYRKEDPLVLSMGQRRRVAMASVLAGG 434
Query: 486 ADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRV------- 538
A + L+DEP++ D R + K + + T VV HD AD +
Sbjct: 435 AKVILMDEPTSGQDWYHRQILGKELLE-LRDKGYTILVVTHDSRFVDRFADYLLVMNEGK 493
Query: 539 IVYEGQP 545
IV EG+P
Sbjct: 494 IVLEGKP 500
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 363 KLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVE---DSDVEIPEFNVSYKP 419
KL + EGE +++ G +G+GK+T + ++ G++ P + +V + F+V P
Sbjct: 25 KLDIEEGES-----VLITGRSGSGKSTLVSVINGVI-PHLINAEIKGEVRVFGFDVKSTP 78
Query: 420 QKISPKFQSTV-----RHLLHQKIRDSYTHP------------QFVSDVMKPLLIEQLMD 462
K+ T+ + I D + V + MK I L D
Sbjct: 79 IHEISKYVGTLLQDPDTQAFNYTIIDEVAFGVENYMISRDEMIERVEESMKIYGISHLRD 138
Query: 463 QEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAF 522
+E+ LSGGELQR L L ++DEP++ +D + +++K F ++ +
Sbjct: 139 REINTLSGGELQRTILASVLAMRPKALILDEPTSNIDPQGTREILELVKTF--RSEGISL 196
Query: 523 V-VEHDFIMATYLADRVIVY-EGQPSVDC 549
V VEH DR+IV EG+ +VD
Sbjct: 197 VLVEHKIERVLPFVDRIIVVEEGKIAVDV 225
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 98/234 (41%), Gaps = 21/234 (8%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKL-KPNLGRFNNPPDWQEILTYFRGSELQNYFTRI 159
+ G + L+G NG GK+T LK++ G + K L +E G +L T++
Sbjct: 305 KQGTITALMGKNGSGKTTLLKVIVGLIDKKRL-------IVEEEKVIVNGVDLSK--TKL 355
Query: 160 LEDNLKAIIKPQYVD--HIPKAVQGNVGQVLDQKDERDMK--ADLCTDLDLNQVIDRNVG 215
+E PQ+ D I + V+ + + + D K ++ L+ +
Sbjct: 356 VERGKFIAYLPQFFDVMFIKRTVEDEIKFSMKNRGTYDEKRLGEVLKMFSLDAYRKEDPL 415
Query: 216 DLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHD 275
LS G+ +R A+A V A++ + DEP+S D R + + L ++VV HD
Sbjct: 416 VLSMGQRRRVAMASVLAGGAKVILMDEPTSGQDWYHRQILGKELLELRDKGYTILVVTHD 475
Query: 276 LSVLDYLSDFI-------CCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENL 322
+D +D++ L GKP + +L + + L G + E+
Sbjct: 476 SRFVDRFADYLLVMNEGKIVLEGKPEEVFIKSLRHGIEPPLEYELGGLIKNEHF 529
>sp|Q92WD6|UGPC_RHIME sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Rhizobium meliloti (strain 1021) GN=ugpC PE=3 SV=1
Length = 349
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 22/194 (11%)
Query: 364 LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVS-YKPQK- 421
L + +GEF IV++G +G GK+T +RM+AGL +S+ ++ I + V+ +P +
Sbjct: 25 LAIADGEF-----IVLVGPSGCGKSTLLRMIAGL---ESITSGEISIGDRVVNGLEPSER 76
Query: 422 -ISPKFQS-------TVRHLLHQKIRDSYTHPQ----FVSDVMKPLLIEQLMDQEVVNLS 469
I+ FQ+ TVR L +++ T + ++ K L IE +D++ LS
Sbjct: 77 DIAMVFQNYALYPHMTVRQNLSYGLKNRNTPKEEIERRIAKAAKSLEIEPFLDRKPRQLS 136
Query: 470 GGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFI 529
GG+ QRVA+ + + +L DEP + LD++ R+ IKR T+ V HD +
Sbjct: 137 GGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRALGTTSVYVTHDQL 196
Query: 530 MATYLADRVIVYEG 543
A LADR++V G
Sbjct: 197 EAMTLADRLVVLNG 210
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLG------RFNN--PPDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G R N P ++I F+ L
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAGLESITSGEISIGDRVVNGLEPSERDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + NL +K + + PK ++ + R KA L++ +DR
Sbjct: 90 HMT--VRQNLSYGLKNR---NTPK----------EEIERRIAKA--AKSLEIEPFLDRKP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVE 273
LSGG+ QR A+ V+ ++FDEP S LD K R++ ++ L R + + V
Sbjct: 133 RQLSGGQRQRVAMGRAIVREPAAFLFDEPLSNLDAKLRVQMRVEIKRLQRALGTTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFVPTENLRFRD 326
HD L+D + L G G V P + E F+A F+ + ++ D
Sbjct: 193 HDQLEAMTLADRLVVLNG--GRIEQVGTPIELYENPATAFVATFIGSPSMNLLD 244
>sp|Q1GID1|UGPC_RUEST sn-glycerol-3-phosphate import ATP-binding protein UgpC OS=Ruegeria
sp. (strain TM1040) GN=ugpC PE=3 SV=1
Length = 351
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 110/205 (53%), Gaps = 20/205 (9%)
Query: 355 MVKTQGNFK-LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEF 413
+VK+ G+ + L ++GE D + IV++G +G GK+T +RM+AGL ++V D++I +
Sbjct: 9 LVKSYGDTEVLHHIDGEINDGEFIVIVGPSGCGKSTLLRMIAGL---ETVTSGDIKICDR 65
Query: 414 NVS-YKP--QKISPKFQSTVRHLLHQKIRDSYTHP------------QFVSDVMKPLLIE 458
V+ +P + I+ FQ+ + H +R++ + + V + + L I
Sbjct: 66 VVNDLEPANRDIAMVFQNYALYP-HMSVRENMGYGLKIRGNSKADINRRVEEAAEILEIG 124
Query: 459 QLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAK 518
Q +D++ LSGG+ QRVA+ + + ++L DEP + LD++ R+ I++
Sbjct: 125 QYLDRKPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRLEIRKLQQRLG 184
Query: 519 KTAFVVEHDFIMATYLADRVIVYEG 543
T+ V HD + A L DR++V G
Sbjct: 185 VTSIYVTHDQVEAMTLGDRLMVLNG 209
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 29/254 (11%)
Query: 81 KDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAGKLKPNLG------RF 134
KD YG H G+ + +VG +G GKST L+++AG G R
Sbjct: 7 KDLVKSYGDTEVLHHIDGEINDGEFIVIVGPSGCGKSTLLRMIAGLETVTSGDIKICDRV 66
Query: 135 NN--PPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKD 192
N P ++I F+ L + + + +N+ +K ++GN ++++
Sbjct: 67 VNDLEPANRDIAMVFQNYALYPHMS--VRENMGYGLK----------IRGNSKADINRRV 114
Query: 193 ERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQR 252
E + L++ Q +DR LSGG+ QR A+ V++ ++++FDEP S LD K R
Sbjct: 115 E-----EAAEILEIGQYLDRKPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLR 169
Query: 253 LKAAQVVRSL-LRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-IN 310
++ +R L R I V HD L D + L G G P + +
Sbjct: 170 VQMRLEIRKLQQRLGVTSIYVTHDQVEAMTLGDRLMVLNG--GYVEQFGTPIELYDRPAT 227
Query: 311 IFLAGFVPTENLRF 324
+F+AGF+ + ++ F
Sbjct: 228 LFVAGFIGSPSMNF 241
>sp|Q0S6U9|SSUB2_RHOSR Aliphatic sulfonates import ATP-binding protein SsuB 2
OS=Rhodococcus sp. (strain RHA1) GN=ssuB2 PE=3 SV=1
Length = 244
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 99/199 (49%), Gaps = 16/199 (8%)
Query: 373 DSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQKISPKFQSTVRH 432
+ Q + +LG++G+GK+T +R LAGL D DVE ++ P+++S FQ + R
Sbjct: 37 EGQFVALLGKSGSGKSTLLRALAGL-------DYDVEGRGGTLTV-PEEVSVAFQDS-RL 87
Query: 433 LLHQKIRDSYT---HPQFVSDVMKPLLIEQLMDQEVV---NLSGGELQRVALCLCLGKPA 486
L K+ D+ T S L L +E LSGGE QRVAL L +
Sbjct: 88 LPWLKVLDNVTLGLGRTGTSRGAAALAEVGLAGREKAWPSELSGGEQQRVALARALVREP 147
Query: 487 DIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYE-GQP 545
++L DEP LD+ RI +++ I + T +V HD A LADRV+V + GQ
Sbjct: 148 RLFLADEPFGALDALTRIKMHALLQELIRRHRPTVLLVTHDVDEAIALADRVLVLDRGQI 207
Query: 546 SVDCVANAPQSLLTGMNLF 564
VD + + P+ G + F
Sbjct: 208 VVDEIIDIPKPRALGDSKF 226
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 87 YGPNTFKLHRLPVPRP-GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILT 145
+G T L RL + P GQ + L+G +G GKST L+ LAG GR +E+
Sbjct: 22 FGDKTV-LDRLDLDIPEGQFVALLGKSGSGKSTLLRALAGLDYDVEGRGGTLTVPEEVSV 80
Query: 146 YFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLD 205
F+ S L + + +D++ + G G A ++
Sbjct: 81 AFQDSRLLPWL--------------KVLDNVTLGL-GRTGT--------SRGAAALAEVG 117
Query: 206 LNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP 265
L +LSGGE QR A+A V+ +++ DEP LD R+K +++ L+R
Sbjct: 118 LAGREKAWPSELSGGEQQRVALARALVREPRLFLADEPFGALDALTRIKMHALLQELIRR 177
Query: 266 NS-YVIVVEHDLSVLDYLSDFICCL 289
+ V++V HD+ L+D + L
Sbjct: 178 HRPTVLLVTHDVDEAIALADRVLVL 202
>sp|Q7N986|MALK_PHOLL Maltose/maltodextrin import ATP-binding protein MalK
OS=Photorhabdus luminescens subsp. laumondii (strain
TT01) GN=malK PE=3 SV=1
Length = 369
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 24/198 (12%)
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKP- 419
N L++ EGEF IV +G +G GK+T +RM+AGL + V D+ I ++ P
Sbjct: 21 NINLEIQEGEF-----IVFVGPSGCGKSTILRMIAGL---EDVTSGDLLINNIRMNDVPP 72
Query: 420 --QKISPKFQSTVRHLLHQKIRDSYTH------------PQFVSDVMKPLLIEQLMDQEV 465
+ + FQS + H + D+ + Q V + + L + L+D+
Sbjct: 73 AKRGVGMVFQSYALYP-HLSVADNMSFGMKLAGAKKSDIQQRVKQIAEMLQLAHLLDRRP 131
Query: 466 VNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVE 525
LSGG+ QRVA+ L ++L+DEP + LD+ R+ I R ++T V
Sbjct: 132 KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLQRTMIYVT 191
Query: 526 HDFIMATYLADRVIVYEG 543
HD + A LADR++V +G
Sbjct: 192 HDQVEAMTLADRIVVLDG 209
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 29/232 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAG-------KLKPNLGRFNN-PPDWQEILTYFRGSELQN 154
G+ + VG +G GKST L+++AG L N R N+ PP + + F+ L
Sbjct: 29 GEFIVFVGPSGCGKSTILRMIAGLEDVTSGDLLINNIRMNDVPPAKRGVGMVFQSYALYP 88
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ + + DN+ +K + A + ++ Q + Q E L L ++DR
Sbjct: 89 HLS--VADNMSFGMK------LAGAKKSDIQQRVKQIAEM---------LQLAHLLDRRP 131
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKA-AQVVRSLLRPNSYVIVVE 273
LSGG+ QR AI V +++ DEP S LD R++ ++ R R +I V
Sbjct: 132 KALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLQRTMIYVT 191
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVRE-GINIFLAGFVPTENLRF 324
HD L+D I L G G + P + +N F+A F+ + + F
Sbjct: 192 HDQVEAMTLADRIVVLDG--GDVAQIGKPLELYHYPVNRFVASFIGSPKMNF 241
>sp|Q4UJW5|ZNUC_RICFE Zinc import ATP-binding protein ZnuC OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=znuC PE=3 SV=1
Length = 233
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 17/230 (7%)
Query: 351 KYPTMVKTQGNFKLKVVEGEFT--DSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDV 408
++ + K GN KL + FT + I ++G NG GKTT +R++ GL KP + E +
Sbjct: 7 EFRNVSKKFGN-KLPINNVSFTVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTNGEI--I 63
Query: 409 EIPEFNVSYKPQK--ISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVV 466
P+ + Y PQK ++P TV+ L ++ + ++ + +E + DQE+
Sbjct: 64 IDPKLKIGYVPQKFGLTPDLPITVKKFLDLLAPSNFN--SNIKEINSFIDLEHIKDQEIS 121
Query: 467 NLSGGELQRVAL-CLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVE 525
LSGG+ Q+V L C + KP D+ ++DEP LD + ++I T F++
Sbjct: 122 KLSGGQFQKVVLACSIVNKP-DLIILDEPLQSLDVTSQQEFYQLINLIRKKLNITVFMIS 180
Query: 526 HDFIMATYLADRVIVYEGQPSVDCVAN--APQS----LLTGMNLFLSHLD 569
HD +D+VI G V N P S L+ + + H D
Sbjct: 181 HDLFTVIKNSDQVICLNGHICCSGVPNEITPNSEFSNALSSLGFYTHHHD 230
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRIL 160
+ + L+G NG GK+T ++++ G KP G I+
Sbjct: 29 KKNNITTLIGPNGAGKTTIVRLMLGLEKPTNGEI------------------------II 64
Query: 161 EDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADL---CTDLDLNQVIDRNVGDL 217
+ LK PQ P + V + LD + +++ + +DL + D+ + L
Sbjct: 65 DPKLKIGYVPQKFGLTPD-LPITVKKFLDLLAPSNFNSNIKEINSFIDLEHIKDQEISKL 123
Query: 218 SGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP--NSYVIVVEHD 275
SGG+ Q+ +A V ++ + DEP LDV + + Q++ +L+R N V ++ HD
Sbjct: 124 SGGQFQKVVLACSIVNKPDLIILDEPLQSLDVTSQQEFYQLI-NLIRKKLNITVFMISHD 182
Query: 276 LSVLDYLSDFICCLYGKPGAYGV 298
L + SD + CL G GV
Sbjct: 183 LFTVIKNSDQVICLNGHICCSGV 205
>sp|Q1WSB8|ECFA2_LACS1 Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Lactobacillus salivarius (strain UCC118) GN=ecfA2
PE=3 SV=1
Length = 282
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 22/224 (9%)
Query: 373 DSQIIVMLGENGTGKTTFIRMLAGLLKPDS--VEDSDVEIPEFNVSYKPQKISPKFQSTV 430
D Q I ++G NG+GK+T R++ GLLK +S ++ E+ E N+ +KI FQ+
Sbjct: 35 DGQWIALIGHNGSGKSTLARLIDGLLKAESGSIKVDGYEMNEKNIWDIRKKIGMVFQNPD 94
Query: 431 RHLLHQKIRDSYTHP------------QFVSDVMKPLLIEQLMDQEVVNLSGGELQRVAL 478
+ + V+D +K + +E+ E LSGG+ QRVA+
Sbjct: 95 NQFVGADVESDIAFGLENQGVPREEMVSRVADALKVVGMEKFATHEPARLSGGQKQRVAI 154
Query: 479 CLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRV 538
L I ++DE ++ LD E R +IK K T + HD AT LADRV
Sbjct: 155 AGVLALRPKIIILDEATSMLDPEGRKGLITLIKDLKDEYKFTVISITHDIDEAT-LADRV 213
Query: 539 IVYEGQPSVDCVANAPQSLLTGMNLFLS-HLDITF----RRDPT 577
IV + +D P+S+ + L+ LDI F RR+ T
Sbjct: 214 IVLDDGKIID--DGKPESIFIKNDELLNIGLDIPFAEKIRRELT 255
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 79/202 (39%), Gaps = 57/202 (28%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRIL 160
+ GQ + L+G NG GKST +++ G LK G G E+
Sbjct: 34 KDGQWIALIGHNGSGKSTLARLIDGLLKAESGSIK-----------VDGYEMN------- 75
Query: 161 EDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDL---NQVIDRN---- 213
E N+ I K +G V D + + AD+ +D+ NQ + R
Sbjct: 76 EKNIWDIRKK-------------IGMVFQNPDNQFVGADVESDIAFGLENQGVPREEMVS 122
Query: 214 -VGD-----------------LSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKA 255
V D LSGG+ QR AIA V +I + DE +S LD + R
Sbjct: 123 RVADALKVVGMEKFATHEPARLSGGQKQRVAIAGVLALRPKIIILDEATSMLDPEGRKGL 182
Query: 256 AQVVRSLLRPNSY-VIVVEHDL 276
+++ L + VI + HD+
Sbjct: 183 ITLIKDLKDEYKFTVISITHDI 204
>sp|Q97X60|Y1893_SULSO Putative ABC transporter ATP-binding protein SSO1893 OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=SSO1893 PE=3 SV=1
Length = 530
Score = 79.3 bits (194), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 212/486 (43%), Gaps = 59/486 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFR------GSELQNYF 156
G+ + + G +G GKST + ++ G + P+L N E+ + SE+ Y
Sbjct: 31 GESVLITGRSGSGKSTLVSVINGVI-PHL---INAEVKGEVRVFGLDIKTTPTSEISRYV 86
Query: 157 TRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGD 216
+L+D +D + V+ + + + + +C ++ + DR +
Sbjct: 87 GTLLQDPDTQAFNYTVIDEVAFGVENYMVSREEMINRVEESMKIC---GISHLRDREINT 143
Query: 217 LSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDL 276
LSGGELQR +A V + + DEP+S +D + + ++V++ +++VEH +
Sbjct: 144 LSGGELQRTVLASVLAMRPKALILDEPTSNIDPQGTREILELVKTFRSEGISLVLVEHKI 203
Query: 277 S-VLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLTFRVAE 335
VL ++ I GK + +++ I A + + L D L + +
Sbjct: 204 ERVLPFIDRIIVVESGK--------IAVDIKKDEIIDRADLLHSLGLEIPDYMLFLKKSG 255
Query: 336 TPQESAEEIETYARYKYPTMVKTQG-----NFKLKVVEGEF--------TDSQIIVMLGE 382
+ E + YK P+ + +G + K+K G++ I ++G+
Sbjct: 256 FRRIDYEYLRKTYNYKPPSRNEGKGEILFASVKVKTKSGKYLINTKISLKQGTITALMGK 315
Query: 383 NGTGKTTFIRMLAGLL--KPDSVEDSDVEIPEFNVS------------YKPQKISPKF-Q 427
NG+GKTT ++ + GL+ K VE+ V + ++S Y PQ F +
Sbjct: 316 NGSGKTTLLKAIVGLIDKKRLIVEEEKVIVNGKDLSKAKLVERGKYLAYLPQFFDVMFIK 375
Query: 428 STVRHLLHQKIRDSYTHPQF-VSDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPA 486
TV + +++ + + + ++++ ++ ++ + LS G+ +RVA+ + A
Sbjct: 376 RTVEDEVKFSMKNRGVYDEMRLGEILRIFSLDAYRTEDPLVLSMGQRRRVAMASVIAGGA 435
Query: 487 DIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHD--FI--MATYL---ADRVI 539
+ L+DEP++ D R + K + + + T VV HD F+ YL +D I
Sbjct: 436 KVILMDEPTSGQDWYHRQILGKELLE-LRNKGYTILVVTHDARFVDRFTDYLLVMSDGKI 494
Query: 540 VYEGQP 545
V EG+P
Sbjct: 495 VLEGKP 500
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 25/236 (10%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKL-KPNLGRFNNPPDWQEILTYFRGSELQNYFTRI 159
+ G + L+G NG GK+T LK + G + K L +E G +L ++
Sbjct: 305 KQGTITALMGKNGSGKTTLLKAIVGLIDKKRL-------IVEEEKVIVNGKDLSK--AKL 355
Query: 160 LEDNLKAIIKPQYVD--HIPKAVQGNVGQVLDQK---DERDMKADL-CTDLDLNQVIDRN 213
+E PQ+ D I + V+ V + + DE + L LD + D
Sbjct: 356 VERGKYLAYLPQFFDVMFIKRTVEDEVKFSMKNRGVYDEMRLGEILRIFSLDAYRTEDPL 415
Query: 214 VGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVE 273
V LS G+ +R A+A V A++ + DEP+S D R + + L ++VV
Sbjct: 416 V--LSMGQRRRVAMASVIAGGAKVILMDEPTSGQDWYHRQILGKELLELRNKGYTILVVT 473
Query: 274 HDLSVLDYLSDFI-------CCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENL 322
HD +D +D++ L GKP +L + + L G + E
Sbjct: 474 HDARFVDRFTDYLLVMSDGKIVLEGKPEEVFSKSLNHGIEPPLEYELGGLIKNEQF 529
>sp|Q8ES39|Y804_OCEIH Putative ABC transporter ATP-binding protein OB0804
OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM
11309 / KCTC 3954 / HTE831) GN=OB0804 PE=3 SV=1
Length = 527
Score = 79.3 bits (194), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 221/514 (42%), Gaps = 71/514 (13%)
Query: 108 LVGTNGIGKST-AL-------KILAGKLKPN-LGRFNNPPDW------QEILTYFRGSEL 152
L+G +G GKST AL + + G K N L + N ++ QE+ F+ E
Sbjct: 43 LMGASGSGKSTLALCLNGLYPEAVEGTTKGNILYKGKNIAEYPRGIINQEVGIVFQDPES 102
Query: 153 QNYFTRILEDNLKAIIKPQYVDHIPKA-VQGNVGQVLDQKDERDMKADLCTDLDLNQVID 211
Q R+ ED L +++ IP++ ++ + +VL Q + + + ID
Sbjct: 103 QFCMVRV-EDELAFVLENLA---IPRSEMKKKIKKVLQQ-------------IGMLEYID 145
Query: 212 RNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLL-RPNSYVI 270
++ LSGG+ Q+ A+A V + + + DEP++ LD RL+ +++ ++ + N+ V+
Sbjct: 146 ADIHRLSGGQKQKIALASVLLMEPKYIILDEPTANLDPMSRLEFIELIIAIQKKTNTGVL 205
Query: 271 VVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTENLRFRDESLT 330
++EH + + +D + L K + P + + L +++ D T
Sbjct: 206 IIEHQVDDWEMYADRLVVL-SKDNHILIDEKPETAFQLHQNMLRNQQIAIPMKYLDNQET 264
Query: 331 FRVAETPQESAEEIETYARYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTF 390
+ + +E + + Y + V +GEF I +LGENG GK+T
Sbjct: 265 IKKVSHEKSMPVCLEVHHLHYYQKKSAILKDISFSVKQGEF-----ITILGENGAGKSTL 319
Query: 391 IRMLAGLLKPDSVEDSDVEIPEFNVSYKPQKISPKFQSTV-RHLLHQKIRDS-------- 441
++ L GL K + ++ ++ +KI K V + HQ I D+
Sbjct: 320 LQCLIGLKK---YHNGNILFQGKDLQAWDRKILSKHTGFVFQQPEHQFICDTVFDEVAFG 376
Query: 442 -----YTHPQFVSDVMKPLLIEQLMDQEVVN---LSGGELQRVALCLCLGKPADIYLIDE 493
YT + + L +L+D + N LSGG+ +R+++ L + D+ L DE
Sbjct: 377 MRLNNYTTSEINHRTISLLQAFRLLDHQWKNPFTLSGGQKRRLSVATMLDETPDLLLFDE 436
Query: 494 PSAYLDSEQRIVAAKVIKRFILHAKKTAFV-VEHDF-IMATYLADRVIVYEGQPSVDCVA 551
P+ D+ +I L A+ TA + V HD ++ TY +++ +G D
Sbjct: 437 PTFGQDAHTTKELMNMILE--LQAQGTAIIFVTHDMDLVDTYCERALVIDKGSVRFD--- 491
Query: 552 NAPQSLLTGMNLFLSHLDITFRRDPTNFRPRINK 585
PQSL L L T R+P R + +
Sbjct: 492 GNPQSLWNQKEL----LQDTRLREPYRVRESVKR 521
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 16/185 (8%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRIL 160
+ G+ + ++G NG GKST L+ L G L +++N IL F+G +LQ + +IL
Sbjct: 301 KQGEFITILGENGAGKSTLLQCLIG-----LKKYHNG----NIL--FQGKDLQAWDRKIL 349
Query: 161 EDNLKAIIKPQYVDHIPKAVQGNV--GQVLDQKDERDMKADLCTDLDLNQVID---RNVG 215
+ + + I V V G L+ ++ + L +++D +N
Sbjct: 350 SKHTGFVFQQPEHQFICDTVFDEVAFGMRLNNYTTSEINHRTISLLQAFRLLDHQWKNPF 409
Query: 216 DLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHD 275
LSGG+ +R ++A + + ++ +FDEP+ D + ++ L + +I V HD
Sbjct: 410 TLSGGQKRRLSVATMLDETPDLLLFDEPTFGQDAHTTKELMNMILELQAQGTAIIFVTHD 469
Query: 276 LSVLD 280
+ ++D
Sbjct: 470 MDLVD 474
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 43/199 (21%)
Query: 373 DSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQKISPKFQSTVRH 432
++ I +++G +G+GK+T L GL P++VE + + N+ YK + I+ R
Sbjct: 37 ENDITILMGASGSGKSTLALCLNGLY-PEAVEGT----TKGNILYKGKNIA----EYPRG 87
Query: 433 LLHQKIRDSYTHP--QF--------------------------VSDVMKPLLIEQLMDQE 464
+++Q++ + P QF + V++ + + + +D +
Sbjct: 88 IINQEVGIVFQDPESQFCMVRVEDELAFVLENLAIPRSEMKKKIKKVLQQIGMLEYIDAD 147
Query: 465 VVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKT---A 521
+ LSGG+ Q++AL L ++DEP+A LD R+ + I+ I KKT
Sbjct: 148 IHRLSGGQKQKIALASVLLMEPKYIILDEPTANLDPMSRL---EFIELIIAIQKKTNTGV 204
Query: 522 FVVEHDFIMATYLADRVIV 540
++EH ADR++V
Sbjct: 205 LIIEHQVDDWEMYADRLVV 223
>sp|P40735|ECFA1_BACSU Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Bacillus subtilis (strain 168) GN=ecfA PE=3 SV=3
Length = 281
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 349 RYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDS--VEDS 406
RY+ + L+V EGE+ + ++G NG+GK+T R L GL+ P+S +E +
Sbjct: 15 RYRKDAERRALDGVSLQVYEGEW-----LAIVGHNGSGKSTLARALNGLILPESGDIEVA 69
Query: 407 DVEIPEFNVSYKPQKISPKFQSTVRHLLHQKIRDSYTHP------------QFVSDVMKP 454
+++ E +V +KI FQ+ + +RD + V +K
Sbjct: 70 GIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDWAVKQ 129
Query: 455 LLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFI 514
+ ++ +DQE +LSGG+ QRVA+ + DI ++DE ++ LD R + ++
Sbjct: 130 VNMQDFLDQEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLK 189
Query: 515 LHAKKTAFVVEHDFIMATYLADRVIVYEG 543
T + HD A ADR+IV G
Sbjct: 190 EQGMATVISITHDLNEAAK-ADRIIVMNG 217
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 86/220 (39%), Gaps = 55/220 (25%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGR-----------------------FNNPPD 139
G+ L +VG NG GKST + L G + P G F NP +
Sbjct: 35 GEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDN 94
Query: 140 WQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV-QGNVGQVLDQKDERDMKA 198
F G+ +++ LE+N + + + ++ + AV Q N+ LDQ+
Sbjct: 95 ------QFVGTTVRDDVAFGLENN--GVPREEMIERVDWAVKQVNMQDFLDQEPHH---- 142
Query: 199 DLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQV 258
LSGG+ QR AIA V +I + DE +S LD R + +
Sbjct: 143 ------------------LSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLET 184
Query: 259 VRSLLRPN-SYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 297
VR L + VI + HDL+ I GK A G
Sbjct: 185 VRHLKEQGMATVISITHDLNEAAKADRIIVMNGGKKYAEG 224
>sp|Q9YGA6|MALK_THELI Trehalose/maltose import ATP-binding protein MalK OS=Thermococcus
litoralis GN=malK PE=1 SV=1
Length = 372
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 19/189 (10%)
Query: 370 EFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDS----VEDSDVEIPEFNVSYKPQK--IS 423
E D + +++LG +G GKTT +RM+AGL +P + D V PE + P+ I+
Sbjct: 25 EVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIA 84
Query: 424 PKFQSTVRHLLHQKIRDSYTHP------------QFVSDVMKPLLIEQLMDQEVVNLSGG 471
FQS + H + D+ P Q V +V + L + +L++++ LSGG
Sbjct: 85 MVFQSYALYP-HMTVYDNIAFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGG 143
Query: 472 ELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMA 531
+ QRVAL + + ++L+DEP + LD++ R+ +K+ T V HD + A
Sbjct: 144 QRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEA 203
Query: 532 TYLADRVIV 540
+ DR+ V
Sbjct: 204 MTMGDRIAV 212
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 35/244 (14%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFN--------------NPPDWQEILTYFR 148
G+ + L+G +G GK+T L+++AG +P+ G+ PP ++I F+
Sbjct: 29 GEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQ 88
Query: 149 GSELQNYFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQ 208
L + T + DN I P + +P+ Q +DQ+ ++ L L +
Sbjct: 89 SYALYPHMT--VYDN---IAFPLKLRKVPR-------QEIDQRVR-----EVAELLGLTE 131
Query: 209 VIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NS 267
+++R +LSGG+ QR A+ V+ ++++ DEP S LD K R++ ++ L R
Sbjct: 132 LLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGV 191
Query: 268 YVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFVPTENLRFRD 326
I V HD + D I + G V P V + N F+AGF+ + + F D
Sbjct: 192 TTIYVTHDQVEAMTMGDRIAVM--NRGVLQQVGSPDEVYDKPANTFVAGFIGSPPMNFLD 249
Query: 327 ESLT 330
+T
Sbjct: 250 AIVT 253
>sp|Q0RKH4|SSUB2_FRAAA Aliphatic sulfonates import ATP-binding protein SsuB 2 OS=Frankia
alni (strain ACN14a) GN=ssuB2 PE=3 SV=1
Length = 246
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 371 FTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEF-NVSYKPQKISPK---F 426
+S+ + ++G +G GKTT +R LAGL D V + VE+P +V ++ ++ P +
Sbjct: 26 IAESEFVALVGRSGGGKTTLLRTLAGL---DPVAEGSVEVPALRSVVFQEPRLLPWRRVW 82
Query: 427 QSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEV---VNLSGGELQRVALCLCLG 483
Q+ L + RD T K L L D + LSGGE QRVAL L
Sbjct: 83 QNVALGLPRSRGRDEAT---------KALAEVGLADHARAWPLTLSGGEAQRVALARALV 133
Query: 484 KPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV 540
+ ++ L+DEP LD+ RI ++++ + +V HD A LADRVIV
Sbjct: 134 REPELLLLDEPFGALDALTRIHMHALVRQLHERHRPAVLLVTHDVDEALELADRVIV 190
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 30/189 (15%)
Query: 104 QVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDN 163
+ + LVG +G GK+T L+ LAG G P
Sbjct: 30 EFVALVGRSGGGKTTLLRTLAGLDPVAEGSVEVP-------------------------A 64
Query: 164 LKAII--KPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGE 221
L++++ +P+ + + V NV L + RD ++ L LSGGE
Sbjct: 65 LRSVVFQEPRLLPW--RRVWQNVALGLPRSRGRDEATKALAEVGLADHARAWPLTLSGGE 122
Query: 222 LQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLL-RPNSYVIVVEHDLSVLD 280
QR A+A V+ E+ + DEP LD R+ +VR L R V++V HD+
Sbjct: 123 AQRVALARALVREPELLLLDEPFGALDALTRIHMHALVRQLHERHRPAVLLVTHDVDEAL 182
Query: 281 YLSDFICCL 289
L+D + L
Sbjct: 183 ELADRVIVL 191
>sp|Q39KB9|UGPC_BURS3 sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Burkholderia sp. (strain 383) GN=ugpC PE=3 SV=1
Length = 361
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 364 LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSY---KPQ 420
L ++ E D + IV++G +G GK+T +RM+AGL ++V D ++ I E V+ K +
Sbjct: 20 LHGIDVEIADGEFIVLVGPSGCGKSTLLRMIAGL---ETVTDGEIAIGERVVNTLEPKDR 76
Query: 421 KISPKFQS-------TVRHLLHQ--KIR--DSYTHPQFVSDVMKPLLIEQLMDQEVVNLS 469
I+ FQ+ TV + KIR + T V+ K L +E L+ + LS
Sbjct: 77 DIAMVFQNYALYPHMTVAQNMGYGLKIRGIERTTIDSRVAAAAKILELEPLLARRPRELS 136
Query: 470 GGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFI 529
GG+ QRVA+ + + ++L DEP + LD++ R+ I+R T+ V HD I
Sbjct: 137 GGQRQRVAMGRAIVREPSVFLFDEPLSNLDAKLRVQMRLEIQRLHARLATTSVYVTHDQI 196
Query: 530 MATYLADRVIV 540
A LA RVIV
Sbjct: 197 EAMTLAQRVIV 207
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 34/247 (13%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLG------RFNNP--PDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G R N P ++I F+ L
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAGLETVTDGEIAIGERVVNTLEPKDRDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + N+ +K ++G +D + A L+L ++ R
Sbjct: 90 HMT--VAQNMGYGLK----------IRGIERTTIDSR-----VAAAAKILELEPLLARRP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAA-QVVRSLLRPNSYVIVVE 273
+LSGG+ QR A+ V+ +++FDEP S LD K R++ ++ R R + + V
Sbjct: 133 RELSGGQRQRVAMGRAIVREPSVFLFDEPLSNLDAKLRVQMRLEIQRLHARLATTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFV--PTENL---RFRDE 327
HD L+ + + G + P V E +F+AGF+ P NL R D+
Sbjct: 193 HDQIEAMTLAQRVIVM--NRGYAEQIGAPVDVYEKPATVFVAGFIGSPAMNLMHGRLSDD 250
Query: 328 SLTFRVA 334
TF VA
Sbjct: 251 GATFTVA 257
>sp|Q2J3T0|HMUV_RHOP2 Hemin import ATP-binding protein HmuV OS=Rhodopseudomonas palustris
(strain HaA2) GN=hmuV PE=3 SV=1
Length = 262
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 29/202 (14%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILED 162
G+++ +VG NG GKST L++L+G L+P G EL +Y R L D
Sbjct: 30 GELIAIVGPNGAGKSTLLRMLSGDLRPTSGSVR-----------LGDRELSSYSPRELAD 78
Query: 163 NLKAIIK------PQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGD 216
+ + P V+ I + G+VG +K + A L ++ L + R++
Sbjct: 79 RRAVLAQHINVSFPFTVEEIVRMGTGDVGH---RKAGALIDAALH-EVGLGEFRSRDITT 134
Query: 217 LSGGELQRFAIAVV--------AVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSY 268
LSGGE QR A V AV+ I + DEP+S LD++ +L A R R +
Sbjct: 135 LSGGEQQRAHFARVLVQLWSSEAVRGPGILLLDEPTSSLDIRHQLDLAHTARRCARNGAT 194
Query: 269 VIVVEHDLSVLDYLSDFICCLY 290
VI + HDL++ ++ I ++
Sbjct: 195 VIAILHDLNLATRFAERIVVMH 216
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKP--DSVEDSDVEIPEFNVSYK 418
N L V +GE +I ++G NG GK+T +RML+G L+P SV D E+ SY
Sbjct: 22 NVDLAVAQGE-----LIAIVGPNGAGKSTLLRMLSGDLRPTSGSVRLGDRELS----SYS 72
Query: 419 P-----------QKISPKFQSTVRHLLHQKIRD--SYTHPQFVSDVMKPLLIEQLMDQEV 465
P Q I+ F TV ++ D + + + + + +++
Sbjct: 73 PRELADRRAVLAQHINVSFPFTVEEIVRMGTGDVGHRKAGALIDAALHEVGLGEFRSRDI 132
Query: 466 VNLSGGELQRVALCLCL--------GKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHA 517
LSGGE QR L + I L+DEP++ LD ++ A +R +
Sbjct: 133 TTLSGGEQQRAHFARVLVQLWSSEAVRGPGILLLDEPTSSLDIRHQLDLAHTARRCARNG 192
Query: 518 KKTAFVVEHDFIMATYLADRVIV-YEGQPSVD 548
T + HD +AT A+R++V + G + D
Sbjct: 193 -ATVIAILHDLNLATRFAERIVVMHRGAVAAD 223
>sp|Q3KKA1|ZNUC_PSEPF Zinc import ATP-binding protein ZnuC OS=Pseudomonas fluorescens
(strain Pf0-1) GN=znuC PE=3 SV=1
Length = 261
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 7/186 (3%)
Query: 356 VKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNV 415
V+ G L + QI+ ++G NG GKTT +R + GLLKPDS S P+ V
Sbjct: 13 VRFAGQNVLDNIHLSVEPGQIVTLIGPNGAGKTTLVRAVLGLLKPDS--GSVWRKPKLRV 70
Query: 416 SYKPQK--ISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGEL 473
Y PQK + P +V L ++ P+ ++ +K + E ++D V ++SGGE+
Sbjct: 71 GYMPQKLHVDPTLPLSVLRFL--RLVPGVDRPRALA-ALKEVGAEHVIDSPVQSVSGGEM 127
Query: 474 QRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATY 533
QRV L L + ++ ++DEP +D + +I R +V HD +
Sbjct: 128 QRVLLARALLREPELLVLDEPVQGVDVAGQAELYSLITRLRDRHGCGVLMVSHDLHLVMS 187
Query: 534 LADRVI 539
D+V+
Sbjct: 188 TTDQVV 193
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Query: 102 PGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILE 161
PGQ++ L+G NG GK+T ++ + G LKP+ G W++
Sbjct: 30 PGQIVTLIGPNGAGKTTLVRAVLGLLKPDSGSV-----WRK------------------- 65
Query: 162 DNLKAIIKPQ--YVD-HIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLS 218
L+ PQ +VD +P +V + V R + A ++ VID V +S
Sbjct: 66 PKLRVGYMPQKLHVDPTLPLSVLRFLRLVPGVDRPRALAA--LKEVGAEHVIDSPVQSVS 123
Query: 219 GGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLL-RPNSYVIVVEHDLS 277
GGE+QR +A ++ E+ + DEP +DV + + ++ L R V++V HDL
Sbjct: 124 GGEMQRVLLARALLREPELLVLDEPVQGVDVAGQAELYSLITRLRDRHGCGVLMVSHDLH 183
Query: 278 VLDYLSDFICCL 289
++ +D + CL
Sbjct: 184 LVMSTTDQVVCL 195
>sp|Q164Y5|UGPC_ROSDO sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Roseobacter denitrificans (strain ATCC 33942 / OCh
114) GN=ugpC PE=3 SV=1
Length = 358
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 107/212 (50%), Gaps = 25/212 (11%)
Query: 349 RYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDV 408
R YP + +K+ +GE +IV +G +G GK+T +RM+AGL +S+ ++
Sbjct: 10 RKTYPNGAEAIFGVDMKIDDGE-----LIVFVGPSGCGKSTLLRMVAGL---ESISSGEI 61
Query: 409 EIPEF---NVSYKPQKISPKFQSTVRHLLHQKIRDSYTH------------PQFVSDVMK 453
I + +VS + ++ FQ+ + H +R + ++ + ++D
Sbjct: 62 LIGDRVINDVSPSERDVAMVFQNYALYP-HMSVRGNMSYGLKNRKMDKEEIERRITDAAT 120
Query: 454 PLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRF 513
L I+Q +D++ LSGG+ QRVA+ + + ++L DEP + LD++ R+ IK+
Sbjct: 121 MLKIDQFLDRQPNQLSGGQRQRVAMGRAIVRHPQVFLFDEPLSNLDAKLRVQMRIEIKKL 180
Query: 514 ILHAKKTAFVVEHDFIMATYLADRV-IVYEGQ 544
T+ V HD A LADR+ ++ EGQ
Sbjct: 181 QRRMNVTSIYVTHDQTEAMTLADRLAVINEGQ 212
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 20/193 (10%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILED 162
G+++ VG +G GKST L+++AG + G EIL G + N + D
Sbjct: 30 GELIVFVGPSGCGKSTLLRMVAGLESISSG---------EILI---GDRVINDVSPSERD 77
Query: 163 NLKAIIKPQYVDHIPKAVQGNVG-----QVLDQKDERDMKADLCTDLDLNQVIDRNVGDL 217
A++ Y + +V+GN+ + +D+++ D T L ++Q +DR L
Sbjct: 78 --VAMVFQNYALYPHMSVRGNMSYGLKNRKMDKEEIERRITDAATMLKIDQFLDRQPNQL 135
Query: 218 SGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVEHDL 276
SGG+ QR A+ V++ ++++FDEP S LD K R++ ++ L R N I V HD
Sbjct: 136 SGGQRQRVAMGRAIVRHPQVFLFDEPLSNLDAKLRVQMRIEIKKLQRRMNVTSIYVTHDQ 195
Query: 277 SVLDYLSDFICCL 289
+ L+D + +
Sbjct: 196 TEAMTLADRLAVI 208
>sp|Q3YSK9|ZNUC_EHRCJ Zinc import ATP-binding protein ZnuC OS=Ehrlichia canis (strain
Jake) GN=znuC PE=3 SV=2
Length = 242
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 26/203 (12%)
Query: 357 KTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKP--DSVEDSDVEIPEFN 414
K N +V GE II +LG NG GKTT IR+L G+ K VE + +F
Sbjct: 37 KVIDNISFRVKFGE-----IITILGPNGGGKTTLIRILVGIYKNYVGLVEYA----KDFT 87
Query: 415 VSYKPQKISPKFQSTVRHLLHQKIRDSYTHPQ---FVSDVMKPLLIEQLMDQEVVNLSGG 471
+ Y PQ S S + + + SYT+ + V DV+K + IE+++D+++ +S G
Sbjct: 88 IGYLPQHFS--VNSLIPMTVEYFLNSSYTNRKRKLGVGDVLKDVNIEKILDRQMSEISYG 145
Query: 472 ELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHD--FI 529
ELQ V L CL D+ ++DEP + +D + K+I + I + + HD F+
Sbjct: 146 ELQLVLLARCLMLNPDLIILDEPVSCMDINAKNSFYKLINKLISIYNLSVIMTSHDLHFV 205
Query: 530 MATYLADRVI-----VY-EGQPS 546
M+ + RVI VY EG PS
Sbjct: 206 MSN--SYRVICINKSVYCEGSPS 226
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 22/175 (12%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILED 162
G+++ ++G NG GK+T ++IL G K +G D+ G Q++ L
Sbjct: 49 GEIITILGPNGGGKTTLIRILVGIYKNYVGLVEYAKDFT------IGYLPQHFSVNSL-- 100
Query: 163 NLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGEL 222
IP V+ + + + D+ D+++ +++DR + ++S GEL
Sbjct: 101 -------------IPMTVEYFLNSSYTNRKRKLGVGDVLKDVNIEKILDRQMSEISYGEL 147
Query: 223 QRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVEHDL 276
Q +A + N ++ + DEP S +D+ + +++ L+ N VI+ HDL
Sbjct: 148 QLVLLARCLMLNPDLIILDEPVSCMDINAKNSFYKLINKLISIYNLSVIMTSHDL 202
>sp|Q1RGL1|ZNUC_RICBR Zinc import ATP-binding protein ZnuC OS=Rickettsia bellii (strain
RML369-C) GN=znuC PE=3 SV=1
Length = 233
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 351 KYPTMVKTQGNFKLKVVEGEFT--DSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDV 408
++ + K GN KL + FT + I ++G NG GKTT +R++ GL KP S E +
Sbjct: 7 EFHNVSKKFGN-KLPINNVSFTVKKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEI--I 63
Query: 409 EIPEFNVSYKPQK--ISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVV 466
P + Y PQK +S TV+ L ++ T+ + ++ + +E+L DQ++
Sbjct: 64 IDPRLKIGYVPQKFNLSSDLPITVKKFLDLLAPNNLTND--IKEIHSFIDLERLKDQKIS 121
Query: 467 NLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEH 526
LSGG+ Q++ L L D+ ++DEP LD + ++I T F++ H
Sbjct: 122 TLSGGQFQKIVLASSLLSKPDLIILDEPLQSLDVTSQQEFYQLISLIRKKLDITVFMISH 181
Query: 527 DFIMATYLADRVIVYEGQPSVDCVANA--PQS----LLTGMNLFLSHLD 569
D +D+VI G NA P S L+ + + H D
Sbjct: 182 DLFTVIKNSDQVICLNGHICCTGTPNAITPNSDFSNALSSLGFYTHHHD 230
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 89/196 (45%), Gaps = 31/196 (15%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRIL 160
+ + L+G NG GK+T ++++ G KP G I+
Sbjct: 29 KKNNITTLIGPNGAGKTTIVRLMLGLEKPTSGEI------------------------II 64
Query: 161 EDNLKAIIKPQYVD---HIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDL 217
+ LK PQ + +P V+ + + D+K ++ + +DL ++ D+ + L
Sbjct: 65 DPRLKIGYVPQKFNLSSDLPITVKKFLDLLAPNNLTNDIK-EIHSFIDLERLKDQKISTL 123
Query: 218 SGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRP--NSYVIVVEHD 275
SGG+ Q+ +A + ++ + DEP LDV + + Q++ SL+R + V ++ HD
Sbjct: 124 SGGQFQKIVLASSLLSKPDLIILDEPLQSLDVTSQQEFYQLI-SLIRKKLDITVFMISHD 182
Query: 276 LSVLDYLSDFICCLYG 291
L + SD + CL G
Sbjct: 183 LFTVIKNSDQVICLNG 198
>sp|A0K3S5|UGPC_BURCH sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Burkholderia cenocepacia (strain HI2424) GN=ugpC PE=3
SV=1
Length = 361
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 364 LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSY---KPQ 420
L ++ E D + IV++G +G GK+T +RM+AGL +SV D ++ I + V+ K +
Sbjct: 20 LHGIDVEIADGEFIVLVGPSGCGKSTLLRMIAGL---ESVTDGEIAIGDRVVNTLEPKDR 76
Query: 421 KISPKFQS-------TVRHLLHQ--KIR--DSYTHPQFVSDVMKPLLIEQLMDQEVVNLS 469
I+ FQ+ TV + KIR + T V+ K L +E L+ + LS
Sbjct: 77 DIAMVFQNYALYPHMTVAQNMGYGLKIRGIERATIDSRVAAAAKILELEPLLARRPRELS 136
Query: 470 GGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFI 529
GG+ QRVA+ + + ++L DEP + LD++ R+ I+R T+ V HD I
Sbjct: 137 GGQRQRVAMGRAIVREPSVFLFDEPLSNLDAKLRVQMRLEIQRLHARLATTSVYVTHDQI 196
Query: 530 MATYLADRVIV 540
A LA RVIV
Sbjct: 197 EAMTLAQRVIV 207
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 34/247 (13%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLG------RFNNP--PDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G R N P ++I F+ L
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAGLESVTDGEIAIGDRVVNTLEPKDRDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + N+ +K ++G +D + A L+L ++ R
Sbjct: 90 HMT--VAQNMGYGLK----------IRGIERATIDSR-----VAAAAKILELEPLLARRP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAA-QVVRSLLRPNSYVIVVE 273
+LSGG+ QR A+ V+ +++FDEP S LD K R++ ++ R R + + V
Sbjct: 133 RELSGGQRQRVAMGRAIVREPSVFLFDEPLSNLDAKLRVQMRLEIQRLHARLATTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFV--PTENL---RFRDE 327
HD L+ + + G + P V E +F+AGF+ P NL R ++
Sbjct: 193 HDQIEAMTLAQRVIVM--NRGYAEQIGAPVDVYEKPATVFVAGFIGSPAMNLMHGRLSED 250
Query: 328 SLTFRVA 334
+F VA
Sbjct: 251 GASFTVA 257
>sp|Q1BRZ8|UGPC_BURCA sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Burkholderia cenocepacia (strain AU 1054) GN=ugpC
PE=3 SV=1
Length = 361
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 99/191 (51%), Gaps = 17/191 (8%)
Query: 364 LKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSY---KPQ 420
L ++ E D + IV++G +G GK+T +RM+AGL +SV D ++ I + V+ K +
Sbjct: 20 LHGIDVEIADGEFIVLVGPSGCGKSTLLRMIAGL---ESVTDGEIAIGDRVVNTLEPKDR 76
Query: 421 KISPKFQS-------TVRHLLHQ--KIR--DSYTHPQFVSDVMKPLLIEQLMDQEVVNLS 469
I+ FQ+ TV + KIR + T V+ K L +E L+ + LS
Sbjct: 77 DIAMVFQNYALYPHMTVAQNMGYGLKIRGIERATIDSRVAAAAKILELEPLLARRPRELS 136
Query: 470 GGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFI 529
GG+ QRVA+ + + ++L DEP + LD++ R+ I+R T+ V HD I
Sbjct: 137 GGQRQRVAMGRAIVREPSVFLFDEPLSNLDAKLRVQMRLEIQRLHARLATTSVYVTHDQI 196
Query: 530 MATYLADRVIV 540
A LA RVIV
Sbjct: 197 EAMTLAQRVIV 207
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 34/247 (13%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLG------RFNNP--PDWQEILTYFRGSELQN 154
G+ + LVG +G GKST L+++AG G R N P ++I F+ L
Sbjct: 30 GEFIVLVGPSGCGKSTLLRMIAGLESVTDGEIAIGDRVVNTLEPKDRDIAMVFQNYALYP 89
Query: 155 YFTRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNV 214
+ T + N+ +K ++G +D + A L+L ++ R
Sbjct: 90 HMT--VAQNMGYGLK----------IRGIERATIDSR-----VAAAAKILELEPLLARRP 132
Query: 215 GDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAA-QVVRSLLRPNSYVIVVE 273
+LSGG+ QR A+ V+ +++FDEP S LD K R++ ++ R R + + V
Sbjct: 133 RELSGGQRQRVAMGRAIVREPSVFLFDEPLSNLDAKLRVQMRLEIQRLHARLATTSVYVT 192
Query: 274 HDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREG-INIFLAGFV--PTENL---RFRDE 327
HD L+ + + G + P V E +F+AGF+ P NL R ++
Sbjct: 193 HDQIEAMTLAQRVIVM--NRGYAEQIGAPVDVYEKPATVFVAGFIGSPAMNLMHGRLSED 250
Query: 328 SLTFRVA 334
+F VA
Sbjct: 251 GASFTVA 257
>sp|Q48FT0|SSUB2_PSE14 Aliphatic sulfonates import ATP-binding protein SsuB 2
OS=Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6) GN=ssuB2 PE=3 SV=1
Length = 268
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 361 NFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVS-YKP 419
L + GEF + +LG +G+GKTT +R LAGL D ++ ++ +P + ++
Sbjct: 33 GLDLDIAAGEF-----VALLGASGSGKTTLLRTLAGL---DDIDSGELRVPVARAAVFQE 84
Query: 420 QKISPKFQSTVRHLLHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALC 479
++ P + +L +I D+ + + + + ++ LSGGE QRVAL
Sbjct: 85 PRLMPWKSAWKNVVLGLRINDAKARAEAA---LTEVGLAHRLNAFPATLSGGEAQRVALA 141
Query: 480 LCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVI 539
L + + L+DEP A LD+ RI ++I +V HD A LADRVI
Sbjct: 142 RGLVREPKLLLLDEPFAALDALTRIRMHQLIIDLWRKHTPAVLLVTHDVDEAILLADRVI 201
Query: 540 VY-EGQPSVDCVANAPQSLLTGMNLFLS 566
V +G+ + D + P+ +G F S
Sbjct: 202 VLADGKLADDIRVDLPRQRDSGQAGFQS 229
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILED 162
G+ + L+G +G GK+T L+ LAG + G P R + Q
Sbjct: 41 GEFVALLGASGSGKTTLLRTLAGLDDIDSGELRVP--------VARAAVFQ--------- 83
Query: 163 NLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGEL 222
+P+ + K+ NV L D + T++ L ++ LSGGE
Sbjct: 84 ------EPRLMPW--KSAWKNVVLGLRINDAKARAEAALTEVGLAHRLNAFPATLSGGEA 135
Query: 223 QRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNS-YVIVVEHDLSVLDY 281
QR A+A V+ ++ + DEP + LD R++ Q++ L R ++ V++V HD+
Sbjct: 136 QRVALARGLVREPKLLLLDEPFAALDALTRIRMHQLIIDLWRKHTPAVLLVTHDVDEAIL 195
Query: 282 LSDFICCL 289
L+D + L
Sbjct: 196 LADRVIVL 203
>sp|Q2K6L3|UGPC1_RHIEC sn-glycerol-3-phosphate import ATP-binding protein UgpC 1
OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ugpC1
PE=3 SV=1
Length = 347
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 372 TDSQIIVMLGENGTGKTTFIRMLAGL-------LKPDSVEDSDVEIPEFNVSYKPQKISP 424
D ++IV++G +G GK+T +RM+AGL L+ + V+ + N++ Q +
Sbjct: 27 ADGEMIVLVGPSGCGKSTLLRMIAGLEVISSGHLRISGNDVGHVDPADRNIAMVFQNYAL 86
Query: 425 KFQSTVRHLLHQKIRDS----YTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL 480
TVR L +++ + + ++D L I + +++ LSGG+ QRVA+
Sbjct: 87 YPHMTVRQNLEYGLKNRRVPRHEINRRIADAADILEIGEFLERRPRQLSGGQRQRVAMGR 146
Query: 481 CLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV 540
+ + +L DEP + LD++ R+ I+R K T+ V HD + A LADR++V
Sbjct: 147 AIVRDPAAFLFDEPLSNLDAKLRVRMRVEIRRLQRQLKTTSLYVTHDQLEAMTLADRLVV 206
Query: 541 YEG 543
G
Sbjct: 207 MNG 209
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 43/273 (15%)
Query: 69 AIQIINLPKDLDKDTTHRYGP-NTFKLHRLPVPRPGQVLGLVGTNGIGKSTALKILAG-- 125
AI++I+L K+ YGP K L V G+++ LVG +G GKST L+++AG
Sbjct: 3 AIELIDLKKN--------YGPVPAVKGINLTVA-DGEMIVLVGPSGCGKSTLLRMIAGLE 53
Query: 126 -------KLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPK 178
++ N +P D + I F+ L + T + NL+ +K + V P+
Sbjct: 54 VISSGHLRISGNDVGHVDPAD-RNIAMVFQNYALYPHMT--VRQNLEYGLKNRRV---PR 107
Query: 179 AVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIY 238
+ R + AD L++ + ++R LSGG+ QR A+ V++ +
Sbjct: 108 -----------HEINRRI-ADAADILEIGEFLERRPRQLSGGQRQRVAMGRAIVRDPAAF 155
Query: 239 MFDEPSSYLDVKQRLKAAQVVRSLLRP-NSYVIVVEHDLSVLDYLSDFICCLYGKPGAYG 297
+FDEP S LD K R++ +R L R + + V HD L+D + + G G
Sbjct: 156 LFDEPLSNLDAKLRVRMRVEIRRLQRQLKTTSLYVTHDQLEAMTLADRLVVMNG--GRIE 213
Query: 298 VVTLPFSV-REGINIFLAGFV--PTENLRFRDE 327
+ P V R +F+AGF+ P NL DE
Sbjct: 214 QIGTPVEVYRRPETVFVAGFIGSPPMNLIDLDE 246
>sp|Q9HQ18|BTUDA_HALSA Cobalamin import ATP-binding protein BtuD OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=btuD PE=1 SV=2
Length = 398
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 356 VKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKP---------DSVEDS 406
V+ G L V D ++ ++G NG GK+T +R + GL+ P D V
Sbjct: 10 VELAGTRILDDVHASIRDGHLVGVVGPNGAGKSTLLRAMNGLITPTAGTVLVAGDDVHAL 69
Query: 407 DVEIPEFNVSYKPQKISPKFQSTVRHLL------HQKIRDSYTHPQFVSDVMKPLLIEQL 460
++ PQ S F+ TVR ++ H + T V M + Q
Sbjct: 70 SSAAASRRIATVPQDASVSFEFTVRQVVEMGRHPHTTRFGTDTDTAVVDRAMARTGVAQF 129
Query: 461 MDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKT 520
++V +LSGGE QRV L L + A + L+DEP+A LD +I +V++ +
Sbjct: 130 AARDVTSLSGGERQRVLLARALAQAAPVLLLDEPTASLDVNHQIRTLEVVRDLADSEDRA 189
Query: 521 AFVVEHDFIMATYLADRVIVYEGQPSVDCVANAPQSLLT 559
HD +A D ++V D A AP+S+LT
Sbjct: 190 VVAAIHDLDLAARYCDELVVVADGRVHD--AGAPRSVLT 226
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 18/223 (8%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSE----LQNYF 156
R G ++G+VG NG GKST L+ + G + P G D L+ S +
Sbjct: 26 RDGHLVGVVGPNGAGKSTLLRAMNGLITPTAGTVLVAGDDVHALSSAAASRRIATVPQDA 85
Query: 157 TRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGD 216
+ E ++ +++ H + V+D+ R A Q R+V
Sbjct: 86 SVSFEFTVRQVVEMGRHPHTTRFGTDTDTAVVDRAMARTGVA---------QFAARDVTS 136
Query: 217 LSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVE-HD 275
LSGGE QR +A Q A + + DEP++ LDV +++ +VVR L +V HD
Sbjct: 137 LSGGERQRVLLARALAQAAPVLLLDEPTASLDVNHQIRTLEVVRDLADSEDRAVVAAIHD 196
Query: 276 LSVLD-YLSDFICCLYGK---PGAYGVVTLPFSVREGINIFLA 314
L + Y + + G+ GA V P ++R + +A
Sbjct: 197 LDLAARYCDELVVVADGRVHDAGAPRSVLTPDTIRAAFDARVA 239
>sp|B0R5G4|BTUDA_HALS3 Cobalamin import ATP-binding protein BtuD OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=btuD
PE=3 SV=1
Length = 398
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 356 VKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKP---------DSVEDS 406
V+ G L V D ++ ++G NG GK+T +R + GL+ P D V
Sbjct: 10 VELAGTRILDDVHASIRDGHLVGVVGPNGAGKSTLLRAMNGLITPTAGTVLVAGDDVHAL 69
Query: 407 DVEIPEFNVSYKPQKISPKFQSTVRHLL------HQKIRDSYTHPQFVSDVMKPLLIEQL 460
++ PQ S F+ TVR ++ H + T V M + Q
Sbjct: 70 SSAAASRRIATVPQDASVSFEFTVRQVVEMGRHPHTTRFGTDTDTAVVDRAMARTGVAQF 129
Query: 461 MDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKT 520
++V +LSGGE QRV L L + A + L+DEP+A LD +I +V++ +
Sbjct: 130 AARDVTSLSGGERQRVLLARALAQAAPVLLLDEPTASLDVNHQIRTLEVVRDLADSEDRA 189
Query: 521 AFVVEHDFIMATYLADRVIVYEGQPSVDCVANAPQSLLT 559
HD +A D ++V D A AP+S+LT
Sbjct: 190 VVAAIHDLDLAARYCDELVVVADGRVHD--AGAPRSVLT 226
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 18/223 (8%)
Query: 101 RPGQVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILTYFRGSE----LQNYF 156
R G ++G+VG NG GKST L+ + G + P G D L+ S +
Sbjct: 26 RDGHLVGVVGPNGAGKSTLLRAMNGLITPTAGTVLVAGDDVHALSSAAASRRIATVPQDA 85
Query: 157 TRILEDNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDERDMKADLCTDLDLNQVIDRNVGD 216
+ E ++ +++ H + V+D+ R A Q R+V
Sbjct: 86 SVSFEFTVRQVVEMGRHPHTTRFGTDTDTAVVDRAMARTGVA---------QFAARDVTS 136
Query: 217 LSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVE-HD 275
LSGGE QR +A Q A + + DEP++ LDV +++ +VVR L +V HD
Sbjct: 137 LSGGERQRVLLARALAQAAPVLLLDEPTASLDVNHQIRTLEVVRDLADSEDRAVVAAIHD 196
Query: 276 LSVLD-YLSDFICCLYGK---PGAYGVVTLPFSVREGINIFLA 314
L + Y + + G+ GA V P ++R + +A
Sbjct: 197 LDLAARYCDELVVVADGRVHDAGAPRSVLTPDTIRAAFDARVA 239
>sp|Q57855|Y412_METJA Uncharacterized ABC transporter ATP-binding protein MJ0412
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0412
PE=3 SV=1
Length = 267
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 356 VKTQGNFKLKVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDS----VEDSDVEIP 411
VK N L+V E EF + ++G +G GKTT +R++AGL P ++ +V+ P
Sbjct: 33 VKALDNINLEVYENEF-----LTVMGPSGCGKTTLLRIIAGLDYPTEGKVLLDGKEVKGP 87
Query: 412 --EFNVSYKPQKISPKFQSTVRHL---LHQKIRDSYTHPQFVSDVMKPLLIEQLMDQEVV 466
+ V ++ + P +++ ++++ L K + +K + +E D
Sbjct: 88 GADRGVVFQQYTLMP-WRTVLKNVTFGLELKGIPKNERIEIAKKFIKMVGLEGFEDAYPY 146
Query: 467 NLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIKRFILHAKKTAFVVEH 526
LSGG QRVA+ L +I L+DEP A LD++ R + + + KKT F V H
Sbjct: 147 QLSGGMQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIWQKEKKTVFFVTH 206
Query: 527 DFIMATYLADRVIVYEGQPS 546
A YL+DRV+V +P
Sbjct: 207 SVDEAVYLSDRVVVLTARPG 226
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 19/195 (9%)
Query: 104 QVLGLVGTNGIGKSTALKILAGKLKPNLGRFNNPPDWQEILT--YFRGSELQNYFTRILE 161
+ L ++G +G GK+T L+I+AG P G+ D +E+ RG Q Y
Sbjct: 47 EFLTVMGPSGCGKTTLLRIIAGLDYPTEGKV--LLDGKEVKGPGADRGVVFQQYTLMPWR 104
Query: 162 DNLKAIIKPQYVDHIPKAVQGNVGQVLDQKDER-DMKADLCTDLDLNQVIDRNVGDLSGG 220
LK + + IPK +ER ++ + L D LSGG
Sbjct: 105 TVLKNVTFGLELKGIPK-------------NERIEIAKKFIKMVGLEGFEDAYPYQLSGG 151
Query: 221 ELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQR-LKAAQVVRSLLRPNSYVIVVEHDLSVL 279
QR AIA + EI + DEP + LD + R + ++++ + V V H +
Sbjct: 152 MQQRVAIARTLANDPEIVLMDEPFAALDAQTRNILQNELLKIWQKEKKTVFFVTHSVDEA 211
Query: 280 DYLSDFICCLYGKPG 294
YLSD + L +PG
Sbjct: 212 VYLSDRVVVLTARPG 226
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,807,843
Number of Sequences: 539616
Number of extensions: 10337806
Number of successful extensions: 55304
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3605
Number of HSP's successfully gapped in prelim test: 575
Number of HSP's that attempted gapping in prelim test: 37947
Number of HSP's gapped (non-prelim): 13354
length of query: 605
length of database: 191,569,459
effective HSP length: 123
effective length of query: 482
effective length of database: 125,196,691
effective search space: 60344805062
effective search space used: 60344805062
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)