Query 040301
Match_columns 524
No_of_seqs 414 out of 4339
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 07:03:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040301.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040301hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.1E-55 4.5E-60 492.2 39.0 487 20-523 260-776 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.5E-37 5.3E-42 346.5 24.3 330 11-349 131-462 (968)
3 KOG4194 Membrane glycoprotein 100.0 3.8E-36 8.2E-41 289.7 2.3 325 21-354 126-454 (873)
4 KOG4194 Membrane glycoprotein 100.0 6.4E-35 1.4E-39 281.3 4.7 303 19-331 77-380 (873)
5 KOG0444 Cytoskeletal regulator 100.0 4.2E-33 9E-38 270.7 -4.3 346 2-356 11-379 (1255)
6 KOG0444 Cytoskeletal regulator 100.0 8.9E-31 1.9E-35 254.5 -3.7 294 20-329 78-375 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 1.9E-28 4.2E-33 226.9 -6.0 299 20-329 183-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.9 1.6E-28 3.5E-33 227.5 -6.8 310 22-351 116-540 (565)
9 PLN03210 Resistant to P. syrin 99.9 7.9E-23 1.7E-27 230.1 25.5 288 18-327 609-904 (1153)
10 PLN03210 Resistant to P. syrin 99.9 3.8E-22 8.2E-27 224.6 26.2 308 19-350 588-904 (1153)
11 PRK15387 E3 ubiquitin-protein 99.9 9.4E-23 2E-27 213.7 18.4 262 20-333 201-462 (788)
12 KOG0618 Serine/threonine phosp 99.9 2.4E-25 5.2E-30 226.4 -2.4 319 19-351 90-488 (1081)
13 KOG4237 Extracellular matrix p 99.9 1.3E-25 2.8E-30 208.0 -5.2 300 23-334 49-364 (498)
14 PRK15387 E3 ubiquitin-protein 99.9 8.2E-22 1.8E-26 206.7 16.7 252 14-314 216-467 (788)
15 KOG4237 Extracellular matrix p 99.9 1.6E-23 3.5E-28 194.2 -3.5 284 14-306 61-360 (498)
16 PRK15370 E3 ubiquitin-protein 99.8 7.5E-21 1.6E-25 200.7 13.7 247 20-305 178-428 (754)
17 KOG0618 Serine/threonine phosp 99.8 4.6E-23 1E-27 209.9 -3.2 299 20-328 177-488 (1081)
18 PRK15370 E3 ubiquitin-protein 99.8 3.9E-20 8.4E-25 195.4 13.2 248 44-330 178-429 (754)
19 cd00116 LRR_RI Leucine-rich re 99.8 7E-21 1.5E-25 186.7 0.8 282 24-328 2-319 (319)
20 cd00116 LRR_RI Leucine-rich re 99.8 5.9E-21 1.3E-25 187.2 -0.3 189 19-210 22-234 (319)
21 KOG1187 Serine/threonine prote 99.8 3.6E-18 7.8E-23 167.4 10.7 104 420-523 61-165 (361)
22 KOG0617 Ras suppressor protein 99.7 4.4E-20 9.6E-25 152.4 -5.4 164 121-313 29-193 (264)
23 KOG0595 Serine/threonine-prote 99.7 2.8E-17 6.2E-22 154.0 10.1 92 432-523 8-102 (429)
24 KOG0617 Ras suppressor protein 99.7 1.4E-19 3E-24 149.5 -5.9 163 42-219 31-194 (264)
25 KOG1026 Nerve growth factor re 99.6 5.7E-16 1.2E-20 158.4 7.9 97 427-523 479-582 (774)
26 KOG0196 Tyrosine kinase, EPH ( 99.6 2.9E-15 6.3E-20 150.8 8.1 102 422-523 608-723 (996)
27 KOG0197 Tyrosine kinases [Sign 99.5 5.6E-15 1.2E-19 143.8 6.3 97 426-523 198-294 (468)
28 KOG0615 Serine/threonine prote 99.5 3.1E-14 6.8E-19 133.7 8.1 88 434-521 172-267 (475)
29 KOG0194 Protein tyrosine kinas 99.5 3.9E-14 8.4E-19 140.2 8.8 101 423-523 146-254 (474)
30 KOG2052 Activin A type IB rece 99.5 9.1E-14 2E-18 131.9 10.6 88 432-523 209-302 (513)
31 KOG1094 Discoidin domain recep 99.5 2.7E-14 5.8E-19 139.4 6.8 89 435-523 539-628 (807)
32 KOG0575 Polo-like serine/threo 99.5 7.6E-14 1.7E-18 137.7 9.8 90 434-523 18-111 (592)
33 KOG0192 Tyrosine kinase specif 99.5 8.2E-14 1.8E-18 135.8 8.8 88 436-523 43-133 (362)
34 KOG3653 Transforming growth fa 99.5 1.9E-13 4E-18 130.7 9.8 85 435-523 211-301 (534)
35 KOG0581 Mitogen-activated prot 99.5 2.8E-13 6.1E-18 126.2 9.6 89 435-523 80-171 (364)
36 KOG0591 NIMA (never in mitosis 99.4 1.5E-14 3.2E-19 129.3 -0.9 91 434-524 19-114 (375)
37 PLN03150 hypothetical protein; 99.4 8.7E-13 1.9E-17 139.3 11.3 117 246-364 419-538 (623)
38 KOG0532 Leucine-rich repeat (L 99.4 6.1E-15 1.3E-19 143.7 -4.6 174 124-305 74-247 (722)
39 KOG4278 Protein tyrosine kinas 99.4 1.8E-13 3.9E-18 134.5 5.1 97 426-523 259-356 (1157)
40 KOG0605 NDR and related serine 99.4 8.2E-13 1.8E-17 128.5 8.8 93 431-523 138-234 (550)
41 COG4886 Leucine-rich repeat (L 99.4 5.3E-13 1.2E-17 134.7 7.7 196 48-261 97-293 (394)
42 COG4886 Leucine-rich repeat (L 99.4 7.8E-13 1.7E-17 133.5 8.3 201 79-288 96-297 (394)
43 KOG0598 Ribosomal protein S6 k 99.4 7.3E-13 1.6E-17 123.5 7.2 92 432-523 23-118 (357)
44 KOG0611 Predicted serine/threo 99.4 3.9E-13 8.5E-18 125.9 4.2 89 435-523 54-146 (668)
45 KOG0600 Cdc2-related protein k 99.4 8.9E-13 1.9E-17 127.2 6.7 88 433-521 116-208 (560)
46 KOG1095 Protein tyrosine kinas 99.4 1.6E-12 3.4E-17 138.4 9.0 91 433-523 691-788 (1025)
47 KOG0580 Serine/threonine prote 99.4 5.3E-13 1.1E-17 116.9 4.3 90 433-522 21-114 (281)
48 KOG0532 Leucine-rich repeat (L 99.3 3.3E-14 7.2E-19 138.6 -3.8 180 20-218 75-254 (722)
49 KOG0659 Cdk activating kinase 99.3 1.3E-12 2.8E-17 116.2 6.3 89 434-523 2-93 (318)
50 cd05105 PTKc_PDGFR_alpha Catal 99.3 4.7E-12 1E-16 127.3 9.5 96 428-523 31-134 (400)
51 KOG0597 Serine-threonine prote 99.3 1.4E-12 3.1E-17 127.2 5.2 89 434-523 2-93 (808)
52 KOG0593 Predicted protein kina 99.3 1.4E-12 3E-17 118.0 4.3 87 434-521 2-91 (396)
53 KOG0193 Serine/threonine prote 99.3 3.7E-12 8E-17 125.6 7.2 97 424-523 382-480 (678)
54 KOG1909 Ran GTPase-activating 99.3 1.9E-13 4.2E-18 126.0 -1.6 255 18-305 28-311 (382)
55 KOG0616 cAMP-dependent protein 99.3 6.1E-12 1.3E-16 113.6 7.8 90 434-523 44-137 (355)
56 KOG0582 Ste20-like serine/thre 99.3 8.8E-12 1.9E-16 118.7 9.0 95 429-523 21-117 (516)
57 cd05104 PTKc_Kit Catalytic dom 99.3 6.3E-12 1.4E-16 125.9 8.4 94 430-523 31-132 (375)
58 cd05626 STKc_LATS2 Catalytic d 99.3 1.3E-11 2.8E-16 124.0 10.3 89 435-523 2-94 (381)
59 cd05599 STKc_NDR_like Catalyti 99.3 1.3E-11 2.7E-16 123.4 10.0 90 434-523 1-94 (364)
60 cd05629 STKc_NDR_like_fungal C 99.3 1.9E-11 4E-16 122.8 10.6 90 434-523 1-94 (377)
61 KOG3207 Beta-tubulin folding c 99.3 6.5E-13 1.4E-17 125.9 0.0 206 74-281 119-339 (505)
62 cd05064 PTKc_EphR_A10 Catalyti 99.3 2E-11 4.2E-16 116.4 10.0 91 433-523 4-99 (266)
63 cd05107 PTKc_PDGFR_beta Cataly 99.3 1.3E-11 2.9E-16 124.0 9.2 95 429-523 32-134 (401)
64 KOG3207 Beta-tubulin folding c 99.3 7.1E-13 1.5E-17 125.6 -0.1 207 122-329 118-339 (505)
65 cd05096 PTKc_DDR1 Catalytic do 99.3 2.4E-11 5.2E-16 118.2 10.6 91 433-523 4-112 (304)
66 KOG0032 Ca2+/calmodulin-depend 99.3 1.5E-11 3.3E-16 121.1 9.0 92 432-523 33-129 (382)
67 cd05102 PTKc_VEGFR3 Catalytic 99.3 9.9E-12 2.2E-16 122.8 7.9 93 431-523 4-105 (338)
68 cd05148 PTKc_Srm_Brk Catalytic 99.3 1.4E-11 3E-16 117.0 8.4 93 431-523 3-95 (261)
69 PTZ00263 protein kinase A cata 99.3 2.1E-11 4.6E-16 119.9 9.9 90 434-523 18-111 (329)
70 KOG0583 Serine/threonine prote 99.3 1.6E-11 3.5E-16 120.9 9.0 93 431-523 14-113 (370)
71 cd06650 PKc_MEK1 Catalytic dom 99.3 3.2E-11 6.9E-16 118.8 11.1 91 433-523 4-96 (333)
72 cd05612 STKc_PRKX_like Catalyt 99.2 1.5E-11 3.2E-16 118.9 8.3 90 434-523 1-94 (291)
73 cd05600 STKc_Sid2p_Dbf2p Catal 99.2 2.8E-11 6.1E-16 119.3 10.4 90 434-523 1-94 (333)
74 cd05598 STKc_LATS Catalytic do 99.2 2.6E-11 5.7E-16 121.6 10.2 89 435-523 2-94 (376)
75 cd05625 STKc_LATS1 Catalytic d 99.2 2.9E-11 6.3E-16 121.6 10.3 89 435-523 2-94 (382)
76 cd06649 PKc_MEK2 Catalytic dom 99.2 4.1E-11 8.9E-16 118.0 11.0 91 433-523 4-96 (331)
77 cd05628 STKc_NDR1 Catalytic do 99.2 3.6E-11 7.9E-16 120.0 10.5 90 434-523 1-94 (363)
78 KOG1259 Nischarin, modulator o 99.2 1.7E-12 3.8E-17 117.2 0.8 136 167-307 278-414 (490)
79 PTZ00426 cAMP-dependent protei 99.2 3.4E-11 7.3E-16 118.9 9.9 91 433-523 29-124 (340)
80 cd05114 PTKc_Tec_Rlk Catalytic 99.2 3.2E-11 7E-16 114.1 9.5 89 434-523 4-92 (256)
81 cd06624 STKc_ASK Catalytic dom 99.2 4.1E-11 9E-16 114.2 10.2 95 429-523 3-98 (268)
82 cd05596 STKc_ROCK Catalytic do 99.2 3.4E-11 7.3E-16 120.4 9.6 94 430-523 39-136 (370)
83 KOG0574 STE20-like serine/thre 99.2 2.5E-12 5.5E-17 116.0 1.2 87 435-523 34-121 (502)
84 cd05621 STKc_ROCK2 Catalytic d 99.2 3.9E-11 8.4E-16 119.8 9.9 96 428-523 37-136 (370)
85 KOG0586 Serine/threonine prote 99.2 3.4E-11 7.3E-16 119.4 9.1 93 431-523 53-148 (596)
86 KOG1259 Nischarin, modulator o 99.2 2E-12 4.3E-17 116.8 0.5 204 121-332 210-415 (490)
87 PF14580 LRR_9: Leucine-rich r 99.2 1E-11 2.2E-16 107.8 4.8 102 75-180 41-147 (175)
88 cd05106 PTKc_CSF-1R Catalytic 99.2 2.7E-11 5.9E-16 121.2 8.4 96 428-523 32-135 (374)
89 KOG0661 MAPK related serine/th 99.2 3.5E-12 7.5E-17 122.3 1.3 92 432-524 8-103 (538)
90 PF14580 LRR_9: Leucine-rich r 99.2 1E-11 2.3E-16 107.6 4.1 105 21-138 20-126 (175)
91 cd06615 PKc_MEK Catalytic doma 99.2 8.6E-11 1.9E-15 114.5 11.0 89 435-523 2-92 (308)
92 KOG0198 MEKK and related serin 99.2 4.3E-11 9.2E-16 113.4 8.3 91 433-523 16-109 (313)
93 cd05597 STKc_DMPK_like Catalyt 99.2 6.9E-11 1.5E-15 116.3 10.3 90 434-523 1-94 (331)
94 KOG0610 Putative serine/threon 99.2 3.4E-11 7.4E-16 113.7 7.6 91 433-523 76-170 (459)
95 cd05622 STKc_ROCK1 Catalytic d 99.2 6.6E-11 1.4E-15 118.3 10.1 98 426-523 35-136 (371)
96 cd05072 PTKc_Lyn Catalytic dom 99.2 6E-11 1.3E-15 112.6 9.4 91 432-523 4-94 (261)
97 KOG1909 Ran GTPase-activating 99.2 1.5E-12 3.2E-17 120.3 -1.6 244 73-328 27-310 (382)
98 cd06646 STKc_MAP4K5 Catalytic 99.2 8.8E-11 1.9E-15 111.9 10.4 91 433-523 8-99 (267)
99 PHA02988 hypothetical protein; 99.2 6.1E-11 1.3E-15 114.0 9.3 83 440-523 26-115 (283)
100 cd05605 STKc_GRK4_like Catalyt 99.2 7E-11 1.5E-15 113.8 9.6 88 435-522 1-92 (285)
101 cd05624 STKc_MRCK_beta Catalyt 99.2 8.8E-11 1.9E-15 115.6 10.2 90 434-523 1-94 (331)
102 cd06611 STKc_SLK_like Catalyti 99.2 8.4E-11 1.8E-15 112.9 9.8 92 432-523 3-95 (280)
103 PF07714 Pkinase_Tyr: Protein 99.2 3.6E-11 7.9E-16 114.0 7.0 85 439-523 4-94 (259)
104 KOG0663 Protein kinase PITSLRE 99.2 2.2E-11 4.7E-16 111.8 5.1 92 431-523 73-169 (419)
105 KOG0578 p21-activated serine/t 99.2 1.6E-11 3.5E-16 120.5 4.5 92 432-523 271-363 (550)
106 cd05627 STKc_NDR2 Catalytic do 99.2 9.4E-11 2E-15 116.9 10.1 90 434-523 1-94 (360)
107 cd05061 PTKc_InsR Catalytic do 99.2 9.2E-11 2E-15 113.1 9.8 94 430-523 2-102 (288)
108 KOG1025 Epidermal growth facto 99.2 1.7E-11 3.7E-16 124.6 4.5 87 436-523 698-790 (1177)
109 KOG4257 Focal adhesion tyrosin 99.2 4.7E-11 1E-15 118.0 7.4 91 432-523 387-483 (974)
110 cd05631 STKc_GRK4 Catalytic do 99.2 1E-10 2.2E-15 112.7 9.6 87 436-522 2-92 (285)
111 cd05033 PTKc_EphR Catalytic do 99.2 1.4E-10 3E-15 110.4 10.5 91 433-523 3-98 (266)
112 cd05601 STKc_CRIK Catalytic do 99.2 1.2E-10 2.6E-15 114.7 10.2 90 434-523 1-94 (330)
113 cd05595 STKc_PKB_beta Catalyti 99.2 1.6E-10 3.5E-15 113.4 10.8 84 440-523 1-88 (323)
114 cd05068 PTKc_Frk_like Catalyti 99.2 9.1E-11 2E-15 111.4 8.8 91 432-523 4-94 (261)
115 cd05113 PTKc_Btk_Bmx Catalytic 99.2 1E-10 2.3E-15 110.6 9.1 89 434-523 4-92 (256)
116 cd05571 STKc_PKB Catalytic dom 99.2 1.8E-10 3.9E-15 113.0 11.0 84 440-523 1-88 (323)
117 cd05066 PTKc_EphR_A Catalytic 99.2 1.5E-10 3.3E-15 110.2 10.2 90 434-523 4-98 (267)
118 KOG0592 3-phosphoinositide-dep 99.2 3.4E-11 7.3E-16 117.4 5.6 94 431-524 70-168 (604)
119 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.2 1.1E-10 2.3E-15 111.7 9.1 83 441-523 2-109 (274)
120 cd05062 PTKc_IGF-1R Catalytic 99.2 1.2E-10 2.6E-15 111.6 9.5 93 431-523 3-102 (277)
121 cd06631 STKc_YSK4 Catalytic do 99.2 1.9E-10 4.2E-15 109.3 10.8 89 435-523 1-95 (265)
122 KOG0589 Serine/threonine prote 99.1 4.8E-11 1E-15 116.2 6.4 91 433-523 3-97 (426)
123 cd05585 STKc_YPK1_like Catalyt 99.1 1.7E-10 3.8E-15 112.5 10.5 82 442-523 1-86 (312)
124 cd06620 PKc_MAPKK_Byr1_like Ca 99.1 1.4E-10 3.1E-15 111.5 9.7 90 434-523 5-96 (284)
125 KOG0577 Serine/threonine prote 99.1 1.7E-11 3.7E-16 120.3 3.2 86 435-521 27-116 (948)
126 cd05049 PTKc_Trk Catalytic dom 99.1 1.2E-10 2.6E-15 111.7 9.1 91 433-523 4-101 (280)
127 cd05623 STKc_MRCK_alpha Cataly 99.1 1.7E-10 3.7E-15 113.6 10.2 90 434-523 1-94 (332)
128 PRK13184 pknD serine/threonine 99.1 1.8E-10 3.8E-15 123.6 10.8 89 434-522 2-94 (932)
129 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.1 2.3E-10 5E-15 110.1 10.6 90 434-523 4-100 (284)
130 cd05573 STKc_ROCK_NDR_like Cat 99.1 1E-10 2.2E-15 116.2 8.4 90 434-523 1-94 (350)
131 KOG0199 ACK and related non-re 99.1 3.7E-11 7.9E-16 120.2 4.9 89 434-523 110-203 (1039)
132 PLN00034 mitogen-activated pro 99.1 1.4E-10 3E-15 115.4 9.1 87 434-520 74-162 (353)
133 cd05582 STKc_RSK_N N-terminal 99.1 2.4E-10 5.3E-15 111.8 10.7 84 440-523 2-91 (318)
134 cd05034 PTKc_Src_like Catalyti 99.1 1.9E-10 4E-15 109.2 9.5 91 432-523 4-94 (261)
135 KOG0585 Ca2+/calmodulin-depend 99.1 1.3E-10 2.9E-15 111.6 8.1 87 432-518 95-198 (576)
136 cd06645 STKc_MAP4K3 Catalytic 99.1 1.8E-10 4E-15 109.6 9.4 91 433-523 8-99 (267)
137 cd05050 PTKc_Musk Catalytic do 99.1 2E-10 4.4E-15 110.7 9.7 92 432-523 3-101 (288)
138 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.1 2.6E-10 5.6E-15 108.8 10.3 83 441-523 2-88 (269)
139 KOG0201 Serine/threonine prote 99.1 2.5E-11 5.3E-16 115.5 3.0 89 434-522 13-103 (467)
140 cd05090 PTKc_Ror1 Catalytic do 99.1 2.5E-10 5.4E-15 109.8 10.2 89 434-522 5-99 (283)
141 cd05085 PTKc_Fer Catalytic dom 99.1 3.6E-10 7.8E-15 106.5 10.9 84 440-523 1-85 (250)
142 KOG4250 TANK binding protein k 99.1 3E-11 6.6E-16 121.4 3.7 89 435-523 14-110 (732)
143 cd08228 STKc_Nek6 Catalytic do 99.1 3.2E-10 6.9E-15 108.0 10.7 89 434-522 2-94 (267)
144 cd05103 PTKc_VEGFR2 Catalytic 99.1 1.5E-10 3.2E-15 114.6 8.6 92 432-523 5-105 (343)
145 cd05084 PTKc_Fes Catalytic dom 99.1 2.9E-10 6.4E-15 107.2 10.3 84 440-523 1-86 (252)
146 cd05059 PTKc_Tec_like Catalyti 99.1 2.2E-10 4.9E-15 108.4 9.4 89 434-523 4-92 (256)
147 cd05593 STKc_PKB_gamma Catalyt 99.1 3.3E-10 7.3E-15 111.3 10.9 83 440-522 1-87 (328)
148 cd06656 STKc_PAK3 Catalytic do 99.1 3.1E-10 6.8E-15 109.9 10.6 91 433-523 18-109 (297)
149 cd08529 STKc_FA2-like Catalyti 99.1 2.9E-10 6.3E-15 107.5 10.1 89 435-523 1-92 (256)
150 cd05584 STKc_p70S6K Catalytic 99.1 2.8E-10 6E-15 111.7 10.3 84 440-523 2-93 (323)
151 cd08224 STKc_Nek6_Nek7 Catalyt 99.1 3.1E-10 6.7E-15 108.0 10.3 90 434-523 2-95 (267)
152 cd05039 PTKc_Csk_like Catalyti 99.1 2.6E-10 5.7E-15 107.9 9.7 89 433-523 5-93 (256)
153 cd05067 PTKc_Lck_Blk Catalytic 99.1 2.5E-10 5.4E-15 108.3 9.3 90 432-523 4-93 (260)
154 PTZ00267 NIMA-related protein 99.1 2.5E-10 5.4E-15 118.0 9.9 88 435-522 68-157 (478)
155 KOG1989 ARK protein kinase fam 99.1 1.2E-10 2.6E-15 120.3 7.4 90 434-523 37-135 (738)
156 cd05588 STKc_aPKC Catalytic do 99.1 3.9E-10 8.4E-15 110.9 10.8 84 440-523 1-89 (329)
157 cd06632 STKc_MEKK1_plant Catal 99.1 4.4E-10 9.5E-15 106.3 10.8 88 436-523 2-95 (258)
158 KOG0531 Protein phosphatase 1, 99.1 7.8E-12 1.7E-16 126.4 -1.5 243 42-330 70-319 (414)
159 cd05097 PTKc_DDR_like Catalyti 99.1 2.8E-10 6.2E-15 110.1 9.4 90 433-522 4-109 (295)
160 cd05580 STKc_PKA Catalytic dom 99.1 3.9E-10 8.4E-15 108.9 10.3 90 434-523 1-94 (290)
161 cd06644 STKc_STK10_LOK Catalyt 99.1 4.1E-10 8.9E-15 108.8 10.2 91 432-522 10-101 (292)
162 cd05093 PTKc_TrkB Catalytic do 99.1 4.2E-10 9.2E-15 108.5 10.1 89 434-522 5-99 (288)
163 cd06638 STKc_myosinIIIA Cataly 99.1 2.8E-10 6.1E-15 109.6 8.9 98 424-522 8-112 (286)
164 cd05042 PTKc_Aatyk Catalytic d 99.1 5E-10 1.1E-14 106.8 10.5 83 441-523 2-88 (269)
165 cd05589 STKc_PKN Catalytic dom 99.1 3.8E-10 8.2E-15 110.8 9.8 88 436-523 1-95 (324)
166 cd05046 PTK_CCK4 Pseudokinase 99.1 3.3E-10 7.1E-15 108.4 9.2 90 434-523 5-101 (275)
167 cd07871 STKc_PCTAIRE3 Catalyti 99.1 3.4E-10 7.3E-15 109.2 9.3 89 434-523 5-95 (288)
168 cd06622 PKc_MAPKK_PBS2_like Ca 99.1 2.5E-10 5.5E-15 109.9 8.5 90 434-523 1-92 (286)
169 cd05052 PTKc_Abl Catalytic dom 99.1 3.4E-10 7.4E-15 107.5 9.2 90 433-523 5-95 (263)
170 cd06654 STKc_PAK1 Catalytic do 99.1 4.8E-10 1E-14 108.5 10.4 90 434-523 20-110 (296)
171 cd05048 PTKc_Ror Catalytic Dom 99.1 4.5E-10 9.7E-15 108.0 10.1 90 434-523 5-101 (283)
172 cd05036 PTKc_ALK_LTK Catalytic 99.1 4E-10 8.6E-15 108.0 9.7 92 432-523 4-102 (277)
173 cd07869 STKc_PFTAIRE1 Catalyti 99.1 3.7E-10 8.1E-15 109.7 9.6 89 433-522 4-94 (303)
174 cd05065 PTKc_EphR_B Catalytic 99.1 3.8E-10 8.3E-15 107.6 9.5 90 434-523 4-98 (269)
175 cd05594 STKc_PKB_alpha Catalyt 99.1 5.5E-10 1.2E-14 109.7 10.8 84 440-523 1-88 (325)
176 cd08221 STKc_Nek9 Catalytic do 99.1 5.7E-10 1.2E-14 105.5 10.6 89 435-523 1-92 (256)
177 cd06641 STKc_MST3 Catalytic do 99.1 5E-10 1.1E-14 107.3 10.3 88 435-522 5-94 (277)
178 cd05608 STKc_GRK1 Catalytic do 99.1 5.3E-10 1.1E-14 107.3 10.3 81 442-522 1-85 (280)
179 cd06630 STKc_MEKK1 Catalytic d 99.1 4.7E-10 1E-14 106.8 9.9 89 435-523 1-96 (268)
180 cd06640 STKc_MST4 Catalytic do 99.1 5.3E-10 1.2E-14 107.1 10.3 90 434-523 4-95 (277)
181 cd07848 STKc_CDKL5 Catalytic d 99.1 2.7E-10 5.8E-15 109.8 8.2 87 435-521 2-91 (287)
182 cd08227 PK_STRAD_alpha Pseudok 99.1 4.7E-10 1E-14 110.3 10.1 85 438-522 2-91 (327)
183 cd05071 PTKc_Src Catalytic dom 99.1 3.7E-10 8.1E-15 107.3 9.0 89 433-523 5-93 (262)
184 cd06619 PKc_MKK5 Catalytic dom 99.1 6.4E-10 1.4E-14 106.7 10.7 86 435-520 2-89 (279)
185 cd06625 STKc_MEKK3_like Cataly 99.1 7.5E-10 1.6E-14 105.1 10.9 90 434-523 2-97 (263)
186 KOG4721 Serine/threonine prote 99.1 8.5E-11 1.8E-15 115.0 4.3 86 430-523 120-205 (904)
187 cd05088 PTKc_Tie2 Catalytic do 99.1 5.3E-10 1.2E-14 108.7 10.0 90 434-523 7-101 (303)
188 cd06647 STKc_PAK_I Catalytic d 99.1 4.4E-10 9.6E-15 108.6 9.4 91 433-523 18-109 (293)
189 cd05095 PTKc_DDR2 Catalytic do 99.1 4.9E-10 1.1E-14 108.5 9.7 90 434-523 5-112 (296)
190 cd06613 STKc_MAP4K3_like Catal 99.1 6.7E-10 1.5E-14 105.3 10.5 91 433-523 2-93 (262)
191 cd05630 STKc_GRK6 Catalytic do 99.1 6.2E-10 1.4E-14 107.1 10.3 87 436-522 2-92 (285)
192 cd05073 PTKc_Hck Catalytic dom 99.1 4.6E-10 1E-14 106.5 9.2 90 432-523 4-93 (260)
193 cd05632 STKc_GRK5 Catalytic do 99.1 6.3E-10 1.4E-14 107.1 10.1 87 436-522 2-92 (285)
194 cd05112 PTKc_Itk Catalytic dom 99.1 5.3E-10 1.1E-14 105.7 9.4 88 434-522 4-91 (256)
195 cd08229 STKc_Nek7 Catalytic do 99.1 4.9E-10 1.1E-14 106.7 9.2 89 434-522 2-94 (267)
196 KOG4717 Serine/threonine prote 99.1 1.5E-10 3.3E-15 111.9 5.5 92 432-523 16-110 (864)
197 cd05578 STKc_Yank1 Catalytic d 99.1 3.2E-10 6.9E-15 107.4 7.6 89 435-523 1-93 (258)
198 cd05070 PTKc_Fyn_Yrk Catalytic 99.1 5.5E-10 1.2E-14 105.9 9.2 89 432-522 4-92 (260)
199 cd08219 STKc_Nek3 Catalytic do 99.1 9E-10 1.9E-14 104.1 10.6 89 435-523 1-91 (255)
200 PTZ00266 NIMA-related protein 99.1 5.9E-10 1.3E-14 120.3 10.3 97 427-523 6-107 (1021)
201 cd05045 PTKc_RET Catalytic dom 99.1 8.4E-10 1.8E-14 106.5 10.5 89 435-523 1-96 (290)
202 cd05063 PTKc_EphR_A2 Catalytic 99.1 7.5E-10 1.6E-14 105.5 10.0 91 433-523 4-99 (268)
203 cd06629 STKc_MAPKKK_Bck1_like 99.1 6.6E-10 1.4E-14 106.1 9.6 89 435-523 2-101 (272)
204 cd05587 STKc_cPKC Catalytic do 99.1 7.5E-10 1.6E-14 108.7 10.2 89 435-523 1-94 (324)
205 cd05609 STKc_MAST Catalytic do 99.0 9E-10 2E-14 107.2 10.6 89 435-523 2-94 (305)
206 cd05098 PTKc_FGFR1 Catalytic d 99.0 5.8E-10 1.2E-14 108.6 9.2 92 432-523 16-117 (307)
207 PLN03150 hypothetical protein; 99.0 3.6E-10 7.7E-15 119.6 8.2 109 126-234 419-528 (623)
208 cd05092 PTKc_TrkA Catalytic do 99.0 8.4E-10 1.8E-14 106.0 10.2 90 434-523 5-100 (280)
209 cd05619 STKc_nPKC_theta Cataly 99.0 8.8E-10 1.9E-14 107.7 10.5 84 440-523 1-89 (316)
210 cd05618 STKc_aPKC_iota Catalyt 99.0 9.3E-10 2E-14 108.2 10.7 84 440-523 1-89 (329)
211 cd05055 PTKc_PDGFR Catalytic d 99.0 7.1E-10 1.5E-14 107.7 9.7 93 431-523 32-132 (302)
212 cd05607 STKc_GRK7 Catalytic do 99.0 8.7E-10 1.9E-14 105.7 10.2 81 442-522 1-85 (277)
213 cd05590 STKc_nPKC_eta Catalyti 99.0 7.6E-10 1.6E-14 108.4 9.9 84 440-523 1-89 (320)
214 cd05108 PTKc_EGFR Catalytic do 99.0 7.9E-10 1.7E-14 108.2 10.0 89 434-523 7-101 (316)
215 cd08218 STKc_Nek1 Catalytic do 99.0 9.2E-10 2E-14 104.1 10.1 89 435-523 1-92 (256)
216 cd05591 STKc_nPKC_epsilon Cata 99.0 9.8E-10 2.1E-14 107.7 10.6 84 440-523 1-89 (321)
217 cd05053 PTKc_FGFR Catalytic do 99.0 6.8E-10 1.5E-14 107.3 9.3 95 429-523 7-109 (293)
218 cd06621 PKc_MAPKK_Pek1_like Ca 99.0 9.6E-10 2.1E-14 105.9 10.2 88 435-522 2-93 (287)
219 KOG0658 Glycogen synthase kina 99.0 1.4E-10 3E-15 108.3 4.1 85 434-523 24-114 (364)
220 KOG0607 MAP kinase-interacting 99.0 9.4E-11 2E-15 107.0 2.9 84 440-523 84-169 (463)
221 cd05603 STKc_SGK2 Catalytic do 99.0 1.2E-09 2.5E-14 107.2 10.9 84 440-523 1-89 (321)
222 cd05570 STKc_PKC Catalytic dom 99.0 1.1E-09 2.3E-14 107.3 10.5 84 440-523 1-89 (318)
223 cd08220 STKc_Nek8 Catalytic do 99.0 1.1E-09 2.4E-14 103.5 10.3 89 435-523 1-92 (256)
224 cd05038 PTKc_Jak_rpt2 Catalyti 99.0 1.1E-09 2.3E-14 105.3 10.3 90 434-523 4-101 (284)
225 cd05032 PTKc_InsR_like Catalyt 99.0 8.2E-10 1.8E-14 105.8 9.4 91 433-523 5-102 (277)
226 cd06642 STKc_STK25-YSK1 Cataly 99.0 4.4E-10 9.5E-15 107.7 7.5 88 435-522 5-94 (277)
227 cd06643 STKc_SLK Catalytic dom 99.0 9.8E-10 2.1E-14 105.6 10.0 87 436-522 7-94 (282)
228 KOG0531 Protein phosphatase 1, 99.0 2.6E-11 5.6E-16 122.7 -1.1 194 20-234 72-268 (414)
229 cd06609 STKc_MST3_like Catalyt 99.0 1E-09 2.2E-14 104.9 10.0 89 435-523 2-92 (274)
230 cd05051 PTKc_DDR Catalytic dom 99.0 1.2E-09 2.7E-14 105.7 10.6 91 433-523 4-112 (296)
231 cd05575 STKc_SGK Catalytic dom 99.0 1.3E-09 2.8E-14 107.0 10.8 84 440-523 1-89 (323)
232 cd05086 PTKc_Aatyk2 Catalytic 99.0 1.4E-09 2.9E-14 103.8 10.7 83 441-523 2-88 (268)
233 cd06652 STKc_MEKK2 Catalytic d 99.0 1.2E-09 2.7E-14 103.8 10.4 90 434-523 2-99 (265)
234 cd05094 PTKc_TrkC Catalytic do 99.0 9.8E-10 2.1E-14 106.1 9.8 89 434-522 5-99 (291)
235 cd05592 STKc_nPKC_theta_delta 99.0 1.2E-09 2.5E-14 106.9 10.4 84 440-523 1-89 (316)
236 cd06655 STKc_PAK2 Catalytic do 99.0 9.3E-10 2E-14 106.6 9.5 90 434-523 19-109 (296)
237 KOG0588 Serine/threonine prote 99.0 3.2E-10 6.9E-15 113.3 6.2 90 434-523 12-105 (786)
238 cd06612 STKc_MST1_2 Catalytic 99.0 1.2E-09 2.5E-14 103.3 10.0 87 434-522 3-90 (256)
239 cd06614 STKc_PAK Catalytic dom 99.0 1.1E-09 2.4E-14 105.5 9.9 92 431-523 16-108 (286)
240 cd05614 STKc_MSK2_N N-terminal 99.0 1.1E-09 2.4E-14 107.9 10.1 89 435-523 1-98 (332)
241 cd05079 PTKc_Jak1_rpt2 Catalyt 99.0 1.2E-09 2.6E-14 105.1 10.1 90 434-523 4-101 (284)
242 cd06623 PKc_MAPKK_plant_like C 99.0 1.3E-09 2.8E-14 103.4 10.3 89 435-523 2-92 (264)
243 cd06610 STKc_OSR1_SPAK Catalyt 99.0 1.5E-09 3.2E-14 103.3 10.6 90 434-523 1-92 (267)
244 cd05069 PTKc_Yes Catalytic dom 99.0 9.6E-10 2.1E-14 104.3 9.3 89 433-523 5-93 (260)
245 cd05101 PTKc_FGFR2 Catalytic d 99.0 9.2E-10 2E-14 107.0 9.3 93 431-523 12-114 (304)
246 KOG0662 Cyclin-dependent kinas 99.0 1.7E-10 3.7E-15 96.7 3.4 86 435-521 3-91 (292)
247 cd06639 STKc_myosinIIIB Cataly 99.0 1E-09 2.2E-14 106.0 9.5 99 423-522 11-116 (291)
248 cd06605 PKc_MAPKK Catalytic do 99.0 1E-09 2.2E-14 104.3 9.3 89 435-523 2-92 (265)
249 cd06626 STKc_MEKK4 Catalytic d 99.0 1.5E-09 3.2E-14 103.1 10.3 89 435-523 1-92 (264)
250 KOG4658 Apoptotic ATPase [Sign 99.0 2.6E-10 5.6E-15 123.3 5.6 128 20-159 523-652 (889)
251 cd07872 STKc_PCTAIRE2 Catalyti 99.0 1.1E-09 2.5E-14 106.7 9.5 89 434-523 6-96 (309)
252 cd05604 STKc_SGK3 Catalytic do 99.0 1.9E-09 4E-14 106.0 11.0 84 440-523 1-89 (325)
253 cd06637 STKc_TNIK Catalytic do 99.0 1.1E-09 2.4E-14 104.5 9.2 92 431-523 3-102 (272)
254 cd05099 PTKc_FGFR4 Catalytic d 99.0 1.2E-09 2.6E-14 106.8 9.5 93 431-523 9-111 (314)
255 cd06628 STKc_MAPKKK_Byr2_like 99.0 1.7E-09 3.6E-14 103.0 10.2 88 436-523 2-99 (267)
256 cd05041 PTKc_Fes_like Catalyti 99.0 1.7E-09 3.7E-14 101.9 10.2 84 440-523 1-85 (251)
257 cd05610 STKc_MASTL Catalytic d 99.0 1.4E-09 3.1E-14 116.6 10.8 90 434-523 4-97 (669)
258 cd05615 STKc_cPKC_alpha Cataly 99.0 1.4E-09 3E-14 106.7 9.9 89 435-523 1-94 (323)
259 cd08225 STKc_Nek5 Catalytic do 99.0 9.8E-10 2.1E-14 103.9 8.5 89 435-523 1-92 (257)
260 cd05616 STKc_cPKC_beta Catalyt 99.0 1.5E-09 3.3E-14 106.4 10.1 89 435-523 1-94 (323)
261 cd05077 PTK_Jak1_rpt1 Pseudoki 99.0 1.6E-09 3.4E-14 102.9 9.9 84 440-523 1-97 (262)
262 cd07873 STKc_PCTAIRE1 Catalyti 99.0 1.4E-09 3.1E-14 105.5 9.8 89 434-523 6-96 (301)
263 cd07832 STKc_CCRK Catalytic do 99.0 1.9E-09 4E-14 103.8 10.4 88 435-523 1-91 (286)
264 cd05100 PTKc_FGFR3 Catalytic d 99.0 1.2E-09 2.7E-14 107.6 9.4 92 432-523 10-111 (334)
265 cd05056 PTKc_FAK Catalytic dom 99.0 1.4E-09 3.1E-14 103.7 9.4 89 434-523 6-99 (270)
266 cd05089 PTKc_Tie1 Catalytic do 99.0 1.5E-09 3.3E-14 105.1 9.7 90 434-523 2-96 (297)
267 cd05574 STKc_phototropin_like 99.0 1.7E-09 3.7E-14 105.7 10.0 89 435-523 2-94 (316)
268 cd05043 PTK_Ryk Pseudokinase d 99.0 1.8E-09 4E-14 103.6 10.0 92 432-523 4-102 (280)
269 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.0 5.6E-10 1.2E-14 105.8 6.3 84 440-523 1-92 (258)
270 cd05057 PTKc_EGFR_like Catalyt 99.0 2.3E-09 4.9E-14 102.9 10.5 89 434-523 7-101 (279)
271 PF00069 Pkinase: Protein kina 99.0 8.8E-10 1.9E-14 104.4 7.6 87 436-522 1-90 (260)
272 cd05617 STKc_aPKC_zeta Catalyt 99.0 2.2E-09 4.7E-14 105.6 10.6 83 440-522 1-88 (327)
273 cd07847 STKc_CDKL1_4 Catalytic 99.0 1.5E-09 3.2E-14 104.5 9.1 89 434-522 1-92 (286)
274 cd06917 STKc_NAK1_like Catalyt 99.0 1.8E-09 3.9E-14 103.4 9.7 89 435-523 2-95 (277)
275 cd07841 STKc_CDK7 Catalytic do 99.0 1.6E-09 3.4E-14 105.1 9.1 87 436-523 2-94 (298)
276 cd05620 STKc_nPKC_delta Cataly 99.0 2.3E-09 5E-14 104.8 10.4 84 440-523 1-89 (316)
277 cd07861 STKc_CDK1_euk Catalyti 99.0 1.8E-09 4E-14 103.8 9.6 88 435-523 1-91 (285)
278 cd07846 STKc_CDKL2_3 Catalytic 99.0 7.8E-10 1.7E-14 106.4 6.9 88 435-522 2-92 (286)
279 smart00219 TyrKc Tyrosine kina 99.0 2.4E-09 5.3E-14 101.2 10.1 87 437-523 2-94 (258)
280 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.0 2.9E-09 6.3E-14 102.4 10.7 88 436-523 6-101 (283)
281 cd05054 PTKc_VEGFR Catalytic d 99.0 1.3E-09 2.9E-14 107.4 8.5 94 430-523 3-105 (337)
282 KOG0587 Traf2- and Nck-interac 99.0 1.3E-09 2.7E-14 112.3 8.4 99 424-523 9-114 (953)
283 cd06608 STKc_myosinIII_like Ca 99.0 2.6E-09 5.7E-14 102.0 10.3 92 431-523 3-102 (275)
284 cd05577 STKc_GRK Catalytic dom 99.0 2.7E-09 5.9E-14 102.2 10.4 82 442-523 1-86 (277)
285 cd05037 PTK_Jak_rpt1 Pseudokin 99.0 1.8E-09 4E-14 102.1 9.1 82 440-523 1-93 (259)
286 cd07844 STKc_PCTAIRE_like Cata 99.0 1.7E-09 3.8E-14 104.4 9.0 89 434-523 5-95 (291)
287 cd05040 PTKc_Ack_like Catalyti 99.0 2.2E-09 4.7E-14 101.6 9.4 83 440-523 1-88 (257)
288 cd05035 PTKc_Axl_like Catalyti 99.0 3.2E-09 7E-14 101.3 10.7 87 436-522 1-99 (273)
289 cd06659 STKc_PAK6 Catalytic do 99.0 1.5E-09 3.3E-14 105.1 8.4 90 434-523 21-111 (297)
290 cd05602 STKc_SGK1 Catalytic do 99.0 3.5E-09 7.6E-14 104.0 10.9 84 440-523 1-89 (325)
291 KOG2345 Serine/threonine prote 99.0 2E-10 4.4E-15 101.4 1.8 94 430-523 17-116 (302)
292 cd06636 STKc_MAP4K4_6 Catalyti 99.0 2.4E-09 5.1E-14 102.9 9.5 99 424-523 6-112 (282)
293 cd06651 STKc_MEKK3 Catalytic d 99.0 4.6E-09 9.9E-14 100.0 11.3 90 434-523 2-99 (266)
294 PTZ00283 serine/threonine prot 99.0 2E-09 4.3E-14 111.5 9.4 95 429-523 27-132 (496)
295 cd06658 STKc_PAK5 Catalytic do 99.0 1.6E-09 3.5E-14 104.6 8.2 88 435-522 23-111 (292)
296 cd05115 PTKc_Zap-70 Catalytic 99.0 3.2E-09 6.9E-14 100.5 10.1 81 441-522 2-86 (257)
297 cd00192 PTKc Catalytic domain 99.0 2.9E-09 6.3E-14 100.8 9.8 84 440-523 1-89 (262)
298 cd05613 STKc_MSK1_N N-terminal 99.0 3E-09 6.5E-14 102.7 10.0 89 435-523 1-98 (290)
299 cd07859 STKc_TDY_MAPK_plant Ca 99.0 2.3E-09 5E-14 105.9 9.3 88 435-523 1-96 (338)
300 cd08217 STKc_Nek2 Catalytic do 99.0 3.9E-09 8.5E-14 100.1 10.6 89 435-523 1-94 (265)
301 cd05047 PTKc_Tie Catalytic dom 99.0 3.9E-09 8.5E-14 100.7 10.5 84 440-523 1-89 (270)
302 cd05572 STKc_cGK_PKG Catalytic 98.9 4.1E-09 8.9E-14 100.0 10.5 82 442-523 1-86 (262)
303 cd07836 STKc_Pho85 Catalytic d 98.9 2.8E-09 6.1E-14 102.4 9.3 88 435-523 1-90 (284)
304 cd05116 PTKc_Syk Catalytic dom 98.9 4.6E-09 1E-13 99.4 10.5 82 441-523 2-88 (257)
305 cd06617 PKc_MKK3_6 Catalytic d 98.9 3.3E-09 7.2E-14 101.9 9.6 89 434-523 1-92 (283)
306 cd06657 STKc_PAK4 Catalytic do 98.9 3.1E-09 6.7E-14 102.7 9.3 85 438-522 24-109 (292)
307 cd08528 STKc_Nek10 Catalytic d 98.9 4.7E-09 1E-13 100.0 10.4 88 435-522 1-101 (269)
308 cd07870 STKc_PFTAIRE2 Catalyti 98.9 2.7E-09 5.9E-14 103.0 8.8 90 432-522 3-94 (291)
309 KOG0594 Protein kinase PCTAIRE 98.9 1.6E-09 3.4E-14 101.3 6.7 90 433-523 10-109 (323)
310 PF13855 LRR_8: Leucine rich r 98.9 8E-10 1.7E-14 78.8 3.7 61 20-88 1-61 (61)
311 cd07853 STKc_NLK Catalytic dom 98.9 3E-09 6.6E-14 106.6 9.2 87 435-522 1-95 (372)
312 cd06653 STKc_MEKK3_like_1 Cata 98.9 6.5E-09 1.4E-13 98.8 10.9 90 434-523 2-99 (264)
313 KOG4279 Serine/threonine prote 98.9 7.5E-10 1.6E-14 110.9 4.5 83 441-523 582-665 (1226)
314 PRK09188 serine/threonine prot 98.9 4.1E-09 8.9E-14 103.0 9.4 87 430-519 14-107 (365)
315 cd06627 STKc_Cdc7_like Catalyt 98.9 7.2E-09 1.6E-13 97.7 10.9 89 435-523 1-92 (254)
316 cd05091 PTKc_Ror2 Catalytic do 98.9 3.6E-09 7.9E-14 101.7 8.9 89 434-522 5-100 (283)
317 cd06648 STKc_PAK_II Catalytic 98.9 7E-09 1.5E-13 99.8 10.9 89 435-523 20-109 (285)
318 cd05581 STKc_PDK1 Catalytic do 98.9 2.3E-09 4.9E-14 102.8 7.4 89 435-523 2-95 (280)
319 cd05083 PTKc_Chk Catalytic dom 98.9 3.8E-09 8.2E-14 99.8 8.8 86 434-523 6-91 (254)
320 cd05044 PTKc_c-ros Catalytic d 98.9 2.3E-09 4.9E-14 102.2 7.3 84 440-523 1-92 (269)
321 cd08215 STKc_Nek Catalytic dom 98.9 6.8E-09 1.5E-13 98.0 10.5 89 435-523 1-92 (258)
322 cd05122 PKc_STE Catalytic doma 98.9 7.8E-09 1.7E-13 97.2 10.7 89 435-523 1-90 (253)
323 cd08223 STKc_Nek4 Catalytic do 98.9 6.1E-09 1.3E-13 98.5 10.0 89 435-523 1-93 (257)
324 KOG4658 Apoptotic ATPase [Sign 98.9 1E-09 2.2E-14 118.8 5.0 275 40-330 519-808 (889)
325 KOG4236 Serine/threonine prote 98.9 3.1E-09 6.8E-14 103.3 7.7 82 439-521 569-653 (888)
326 cd05082 PTKc_Csk Catalytic dom 98.9 5.7E-09 1.2E-13 98.7 9.5 88 433-523 5-93 (256)
327 cd06606 STKc_MAPKKK Catalytic 98.9 7.8E-09 1.7E-13 97.6 10.3 89 435-523 1-94 (260)
328 cd05111 PTK_HER3 Pseudokinase 98.9 7.7E-09 1.7E-13 99.2 10.4 89 434-523 7-101 (279)
329 cd07860 STKc_CDK2_3 Catalytic 98.9 3.4E-09 7.3E-14 101.9 7.9 87 435-522 1-90 (284)
330 cd06607 STKc_TAO Catalytic dom 98.9 6.4E-09 1.4E-13 101.3 9.9 89 433-522 14-106 (307)
331 KOG0612 Rho-associated, coiled 98.9 3.4E-10 7.4E-15 119.3 0.9 98 426-523 67-168 (1317)
332 KOG0694 Serine/threonine prote 98.9 2.5E-09 5.4E-14 107.6 7.0 89 432-520 366-459 (694)
333 KOG0033 Ca2+/calmodulin-depend 98.9 5E-11 1.1E-15 104.8 -4.4 89 433-521 10-101 (355)
334 cd05058 PTKc_Met_Ron Catalytic 98.9 9.1E-09 2E-13 97.6 10.5 84 440-523 1-90 (262)
335 cd05060 PTKc_Syk_like Catalyti 98.9 8.3E-09 1.8E-13 97.6 10.1 83 440-523 1-88 (257)
336 cd08226 PK_STRAD_beta Pseudoki 98.9 8.7E-09 1.9E-13 101.4 10.5 84 440-523 4-92 (328)
337 cd07833 STKc_CDKL Catalytic do 98.9 3.2E-09 7E-14 102.2 7.3 88 435-522 2-92 (288)
338 cd07856 STKc_Sty1_Hog1 Catalyt 98.9 5.4E-09 1.2E-13 102.8 9.0 95 427-522 3-101 (328)
339 cd05109 PTKc_HER2 Catalytic do 98.9 9.2E-09 2E-13 98.7 10.4 90 433-523 6-101 (279)
340 cd05075 PTKc_Axl Catalytic dom 98.9 9.3E-09 2E-13 98.1 10.4 85 437-521 2-97 (272)
341 KOG1151 Tousled-like protein k 98.9 8.7E-10 1.9E-14 104.9 2.8 90 434-523 463-561 (775)
342 cd08530 STKc_CNK2-like Catalyt 98.9 5.8E-09 1.3E-13 98.5 8.5 89 435-523 1-92 (256)
343 cd05579 STKc_MAST_like Catalyt 98.9 5.9E-09 1.3E-13 98.9 8.4 82 442-523 1-86 (265)
344 cd05586 STKc_Sck1_like Catalyt 98.9 1.1E-08 2.5E-13 100.6 10.5 82 442-523 1-89 (330)
345 PLN00009 cyclin-dependent kina 98.9 7.8E-09 1.7E-13 100.0 9.1 88 434-522 2-92 (294)
346 PHA03212 serine/threonine kina 98.9 8.1E-09 1.8E-13 103.8 9.5 82 434-522 92-174 (391)
347 PRK10345 hypothetical protein; 98.9 1.1E-08 2.3E-13 92.6 9.1 85 436-523 4-100 (210)
348 cd05583 STKc_MSK_N N-terminal 98.8 8.4E-09 1.8E-13 99.4 8.8 88 435-522 1-97 (288)
349 KOG0660 Mitogen-activated prot 98.8 3.4E-09 7.5E-14 98.9 5.6 92 431-523 19-118 (359)
350 cd05110 PTKc_HER4 Catalytic do 98.8 1.4E-08 3E-13 98.8 10.1 90 433-523 6-101 (303)
351 cd07862 STKc_CDK6 Catalytic do 98.8 1.5E-08 3.2E-13 97.8 10.1 88 435-523 2-101 (290)
352 cd07880 STKc_p38gamma_MAPK12 C 98.8 1.3E-08 2.9E-13 100.7 10.0 92 430-522 11-111 (343)
353 cd07843 STKc_CDC2L1 Catalytic 98.8 1.2E-08 2.5E-13 98.7 9.2 90 433-523 4-98 (293)
354 cd07835 STKc_CDK1_like Catalyt 98.8 1.1E-08 2.4E-13 98.2 8.8 87 436-523 1-90 (283)
355 PTZ00036 glycogen synthase kin 98.8 1.1E-08 2.4E-13 104.6 9.2 86 432-522 64-158 (440)
356 cd07842 STKc_CDK8_like Catalyt 98.8 1.4E-08 3E-13 99.3 9.4 87 435-522 1-95 (316)
357 cd06635 STKc_TAO1 Catalytic do 98.8 2E-08 4.4E-13 98.2 10.5 87 435-522 26-116 (317)
358 cd07864 STKc_CDK12 Catalytic d 98.8 1.2E-08 2.7E-13 99.0 8.9 91 431-522 4-107 (302)
359 PF13855 LRR_8: Leucine rich r 98.8 3.8E-09 8.3E-14 75.3 3.8 59 102-160 2-60 (61)
360 cd05074 PTKc_Tyro3 Catalytic d 98.8 2.2E-08 4.7E-13 95.6 10.2 87 436-522 1-99 (273)
361 cd07839 STKc_CDK5 Catalytic do 98.8 6.1E-09 1.3E-13 100.1 6.4 87 435-522 1-90 (284)
362 KOG0576 Mitogen-activated prot 98.8 4.5E-10 9.9E-15 112.1 -1.5 90 432-521 13-103 (829)
363 cd07840 STKc_CDK9_like Catalyt 98.8 1.6E-08 3.4E-13 97.3 9.1 87 436-523 1-92 (287)
364 cd07876 STKc_JNK2 Catalytic do 98.8 1.7E-08 3.7E-13 100.6 9.6 89 432-521 19-116 (359)
365 PLN03224 probable serine/threo 98.8 9.3E-09 2E-13 105.1 7.7 91 432-522 143-277 (507)
366 cd07878 STKc_p38beta_MAPK11 Ca 98.8 1.3E-08 2.9E-13 100.7 8.5 93 429-522 10-111 (343)
367 smart00221 STYKc Protein kinas 98.8 2.7E-08 5.9E-13 91.7 10.0 88 436-523 1-90 (225)
368 PTZ00024 cyclin-dependent prot 98.8 1.8E-08 3.9E-13 99.4 9.3 89 434-523 8-112 (335)
369 KOG0666 Cyclin C-dependent kin 98.8 1.2E-09 2.6E-14 99.6 0.7 88 434-522 24-119 (438)
370 KOG0200 Fibroblast/platelet-de 98.8 1.1E-08 2.5E-13 108.1 8.0 96 428-523 290-395 (609)
371 cd07837 STKc_CdkB_plant Cataly 98.8 1.8E-08 3.9E-13 97.5 8.7 88 434-522 1-97 (295)
372 KOG2982 Uncharacterized conser 98.8 2E-09 4.4E-14 97.6 1.9 208 76-283 45-264 (418)
373 cd07845 STKc_CDK10 Catalytic d 98.8 2.1E-08 4.5E-13 97.8 9.0 91 432-523 5-100 (309)
374 cd05611 STKc_Rim15_like Cataly 98.8 3.7E-08 8.1E-13 93.3 10.5 84 440-523 2-90 (260)
375 cd07877 STKc_p38alpha_MAPK14 C 98.8 2.5E-08 5.4E-13 98.8 9.5 97 425-522 8-113 (345)
376 cd06633 STKc_TAO3 Catalytic do 98.8 5.1E-08 1.1E-12 95.2 11.2 86 436-522 23-112 (313)
377 cd05123 STKc_AGC Catalytic dom 98.8 2.3E-08 5E-13 94.1 8.3 82 442-523 1-86 (250)
378 cd07830 STKc_MAK_like Catalyti 98.8 1.5E-08 3.3E-13 97.3 7.2 87 436-523 1-90 (283)
379 KOG0579 Ste20-like serine/thre 98.8 1.1E-09 2.3E-14 108.7 -0.9 89 434-522 32-121 (1187)
380 KOG0690 Serine/threonine prote 98.8 2.4E-09 5.2E-14 98.1 1.4 90 433-522 167-260 (516)
381 KOG0667 Dual-specificity tyros 98.8 1.3E-08 2.9E-13 102.1 6.7 87 435-523 187-280 (586)
382 cd08222 STKc_Nek11 Catalytic d 98.8 1.3E-08 2.8E-13 96.5 6.4 88 435-522 1-94 (260)
383 cd07831 STKc_MOK Catalytic dom 98.7 3.6E-08 7.9E-13 94.6 9.6 87 436-523 1-92 (282)
384 KOG4645 MAPKKK (MAP kinase kin 98.7 1.8E-09 3.9E-14 115.6 0.4 93 431-523 1232-1327(1509)
385 PHA03390 pk1 serine/threonine- 98.7 5.1E-08 1.1E-12 92.9 10.2 92 427-523 7-102 (267)
386 cd05633 STKc_GRK3 Catalytic do 98.7 5.8E-08 1.3E-12 93.1 10.4 83 441-523 1-90 (279)
387 cd07874 STKc_JNK3 Catalytic do 98.7 3.4E-08 7.3E-13 98.3 9.1 90 432-522 15-113 (355)
388 PHA03211 serine/threonine kina 98.7 2.9E-08 6.3E-13 101.4 8.7 84 433-523 168-252 (461)
389 cd07865 STKc_CDK9 Catalytic do 98.7 4.3E-08 9.4E-13 95.5 9.5 90 432-522 10-110 (310)
390 cd07875 STKc_JNK1 Catalytic do 98.7 4.1E-08 8.9E-13 98.1 9.5 90 432-522 22-120 (364)
391 cd08216 PK_STRAD Pseudokinase 98.7 2.9E-08 6.3E-13 96.9 8.3 83 440-523 8-92 (314)
392 cd07852 STKc_MAPK15 Catalytic 98.7 3.2E-08 6.9E-13 97.7 8.6 91 432-523 5-101 (337)
393 cd07854 STKc_MAPK4_6 Catalytic 98.7 2.4E-08 5.2E-13 98.8 7.6 88 434-522 5-107 (342)
394 cd06634 STKc_TAO2 Catalytic do 98.7 5.4E-08 1.2E-12 94.8 10.0 88 434-522 15-106 (308)
395 KOG1859 Leucine-rich repeat pr 98.7 2.7E-10 5.8E-15 114.7 -6.7 199 124-331 83-294 (1096)
396 PHA03209 serine/threonine kina 98.7 3.6E-08 7.7E-13 98.2 8.3 85 432-523 64-149 (357)
397 cd07829 STKc_CDK_like Catalyti 98.7 2.6E-08 5.5E-13 95.6 6.9 87 436-523 1-90 (282)
398 cd07868 STKc_CDK8 Catalytic do 98.7 6.6E-08 1.4E-12 94.6 9.6 81 439-522 6-91 (317)
399 cd07863 STKc_CDK4 Catalytic do 98.7 4.5E-08 9.7E-13 94.3 8.2 88 435-523 1-99 (288)
400 cd05606 STKc_beta_ARK Catalyti 98.7 8E-08 1.7E-12 92.1 9.9 82 441-522 1-89 (278)
401 cd07858 STKc_TEY_MAPK_plant Ca 98.7 3.9E-08 8.5E-13 97.1 7.8 90 433-523 4-101 (337)
402 cd07850 STKc_JNK Catalytic dom 98.7 8E-08 1.7E-12 95.5 10.0 90 432-522 14-112 (353)
403 cd07855 STKc_ERK5 Catalytic do 98.7 3E-08 6.5E-13 97.8 6.8 89 433-522 4-99 (334)
404 cd06616 PKc_MKK4 Catalytic dom 98.7 7.1E-08 1.5E-12 92.9 9.0 87 434-521 4-93 (288)
405 cd07849 STKc_ERK1_2_like Catal 98.7 5.4E-08 1.2E-12 96.1 8.4 89 433-522 4-99 (336)
406 cd05118 STKc_CMGC Catalytic do 98.7 6.1E-08 1.3E-12 93.0 8.0 87 436-523 1-90 (283)
407 cd07867 STKc_CDC2L6 Catalytic 98.7 8.7E-08 1.9E-12 93.7 9.2 80 440-522 7-91 (317)
408 PHA03207 serine/threonine kina 98.7 7E-08 1.5E-12 97.4 8.6 83 434-522 92-177 (392)
409 cd06618 PKc_MKK7 Catalytic dom 98.7 9.3E-08 2E-12 92.5 9.2 90 432-522 13-105 (296)
410 KOG1859 Leucine-rich repeat pr 98.6 1.8E-10 4E-15 115.8 -9.9 126 150-281 165-292 (1096)
411 cd07851 STKc_p38 Catalytic dom 98.6 3.8E-08 8.3E-13 97.4 6.2 92 431-523 12-112 (343)
412 cd07834 STKc_MAPK Catalytic do 98.6 5.6E-08 1.2E-12 95.7 7.1 88 435-523 1-96 (330)
413 KOG0599 Phosphorylase kinase g 98.6 2.5E-08 5.5E-13 89.4 3.9 91 433-523 16-116 (411)
414 cd07838 STKc_CDK4_6_like Catal 98.6 1.7E-07 3.7E-12 90.1 9.2 87 436-523 1-98 (287)
415 cd07879 STKc_p38delta_MAPK13 C 98.6 1.6E-07 3.4E-12 93.0 8.7 88 433-521 14-110 (342)
416 PTZ00284 protein kinase; Provi 98.6 1.4E-07 3.1E-12 97.4 8.6 95 427-523 122-224 (467)
417 cd00180 PKc Catalytic domain o 98.6 3.6E-07 7.7E-12 83.0 10.3 82 442-523 1-84 (215)
418 KOG1035 eIF-2alpha kinase GCN2 98.6 3E-08 6.5E-13 105.9 3.1 81 430-510 475-557 (1351)
419 cd07866 STKc_BUR1 Catalytic do 98.5 1.6E-07 3.4E-12 91.5 7.5 89 433-522 7-106 (311)
420 KOG1006 Mitogen-activated prot 98.5 2.5E-08 5.3E-13 89.3 1.5 85 438-523 68-155 (361)
421 KOG1152 Signal transduction se 98.5 7E-08 1.5E-12 95.3 4.6 89 434-522 561-662 (772)
422 PRK10359 lipopolysaccharide co 98.5 1.9E-07 4E-12 84.9 6.9 89 432-521 29-134 (232)
423 cd05147 RIO1_euk RIO kinase fa 98.5 1.5E-07 3.3E-12 84.1 6.1 80 439-520 2-107 (190)
424 KOG0986 G protein-coupled rece 98.5 2.5E-08 5.4E-13 95.6 0.8 91 432-522 183-277 (591)
425 KOG0584 Serine/threonine prote 98.5 7.6E-08 1.6E-12 96.2 4.0 88 437-524 43-137 (632)
426 KOG0596 Dual specificity; seri 98.5 1.5E-07 3.2E-12 92.7 5.5 90 433-523 360-452 (677)
427 KOG0668 Casein kinase II, alph 98.5 4.1E-08 8.9E-13 85.9 1.3 88 432-522 36-127 (338)
428 PRK09605 bifunctional UGMP fam 98.5 1.4E-06 3.1E-11 91.3 12.7 90 432-522 331-428 (535)
429 PHA03210 serine/threonine kina 98.5 2.7E-07 5.8E-12 96.0 6.9 90 432-522 146-254 (501)
430 PRK14879 serine/threonine prot 98.4 5.7E-07 1.2E-11 82.3 8.1 82 440-522 2-91 (211)
431 KOG0608 Warts/lats-like serine 98.4 1.4E-07 3E-12 94.2 4.0 86 436-521 631-720 (1034)
432 COG5238 RNA1 Ran GTPase-activa 98.4 2.4E-08 5.2E-13 89.6 -1.4 77 19-98 29-114 (388)
433 cd05576 STKc_RPK118_like Catal 98.4 6.1E-07 1.3E-11 83.7 7.6 74 445-523 4-78 (237)
434 smart00220 S_TKc Serine/Threon 98.4 6.8E-07 1.5E-11 83.3 7.8 78 446-523 1-80 (244)
435 cd07857 STKc_MPK1 Catalytic do 98.4 1.3E-06 2.8E-11 86.1 9.2 87 435-522 1-97 (332)
436 KOG4579 Leucine-rich repeat (L 98.4 1.2E-08 2.5E-13 82.1 -4.3 59 246-305 78-136 (177)
437 TIGR03724 arch_bud32 Kae1-asso 98.4 8.8E-07 1.9E-11 80.2 7.4 81 441-522 1-89 (199)
438 cd05145 RIO1_like RIO kinase f 98.4 1.7E-06 3.7E-11 77.6 8.9 78 439-518 2-105 (190)
439 KOG2120 SCF ubiquitin ligase, 98.3 1E-08 2.2E-13 93.1 -6.0 175 77-254 186-372 (419)
440 KOG2120 SCF ubiquitin ligase, 98.3 1.9E-08 4.2E-13 91.3 -6.2 238 77-319 137-390 (419)
441 KOG4579 Leucine-rich repeat (L 98.2 3.2E-08 6.8E-13 79.6 -4.6 83 197-281 53-136 (177)
442 KOG2982 Uncharacterized conser 98.2 2.6E-07 5.6E-12 84.2 0.4 182 150-331 72-264 (418)
443 PF12799 LRR_4: Leucine Rich r 98.2 9.6E-07 2.1E-11 57.6 2.9 39 20-59 1-39 (44)
444 COG5238 RNA1 Ran GTPase-activa 98.2 1.8E-07 3.8E-12 84.1 -0.8 90 72-162 26-133 (388)
445 KOG1024 Receptor-like protein 98.2 2E-06 4.3E-11 81.3 5.7 97 426-522 276-380 (563)
446 cd05144 RIO2_C RIO kinase fami 98.2 5.6E-06 1.2E-10 74.8 7.9 91 427-521 8-122 (198)
447 KOG0669 Cyclin T-dependent kin 98.2 2.4E-08 5.1E-13 88.6 -7.3 88 433-521 16-114 (376)
448 KOG1167 Serine/threonine prote 98.1 1.7E-06 3.7E-11 82.7 4.0 92 430-523 32-128 (418)
449 KOG0984 Mitogen-activated prot 98.1 1.9E-06 4.2E-11 74.5 3.8 94 429-523 41-137 (282)
450 KOG0604 MAP kinase-activated p 98.1 8.5E-07 1.8E-11 81.0 0.9 87 432-523 59-152 (400)
451 KOG0696 Serine/threonine prote 98.1 6E-07 1.3E-11 85.3 -0.5 92 433-524 348-444 (683)
452 KOG1644 U2-associated snRNP A' 98.1 8.2E-06 1.8E-10 70.5 6.4 84 102-185 65-152 (233)
453 KOG1290 Serine/threonine prote 98.0 9.6E-06 2.1E-10 79.0 6.6 88 434-523 78-178 (590)
454 smart00090 RIO RIO-like kinase 98.0 9E-06 2E-10 75.4 6.1 88 429-520 23-138 (237)
455 KOG1644 U2-associated snRNP A' 98.0 1.1E-05 2.3E-10 69.9 5.9 57 200-258 45-101 (233)
456 PRK15386 type III secretion pr 98.0 2.8E-05 6.1E-10 76.1 9.1 17 43-59 51-67 (426)
457 KOG0983 Mitogen-activated prot 98.0 4.8E-06 1.1E-10 75.2 3.4 86 436-522 94-182 (391)
458 PLN03225 Serine/threonine-prot 98.0 2E-05 4.4E-10 82.8 8.6 88 432-523 130-228 (566)
459 KOG1027 Serine/threonine prote 98.0 5.2E-06 1.1E-10 85.9 3.9 83 436-523 511-595 (903)
460 KOG0695 Serine/threonine prote 98.0 1.7E-06 3.7E-11 80.0 0.3 90 433-522 249-343 (593)
461 PF12799 LRR_4: Leucine Rich r 97.9 7E-06 1.5E-10 53.5 2.8 38 44-90 1-38 (44)
462 cd05120 APH_ChoK_like Aminogly 97.9 1.6E-05 3.5E-10 68.0 5.7 78 438-518 2-81 (155)
463 PRK15386 type III secretion pr 97.9 5E-05 1.1E-09 74.5 9.3 53 76-135 52-104 (426)
464 KOG0614 cGMP-dependent protein 97.9 1.4E-06 3E-11 85.0 -2.3 91 434-524 420-514 (732)
465 KOG0664 Nemo-like MAPK-related 97.8 1.6E-06 3.5E-11 78.0 -2.0 86 435-521 54-147 (449)
466 TIGR01982 UbiB 2-polyprenylphe 97.8 3.2E-05 6.9E-10 78.5 6.6 84 439-522 122-250 (437)
467 KOG2739 Leucine-rich acidic nu 97.8 5.7E-06 1.2E-10 74.6 0.9 105 21-138 19-129 (260)
468 KOG0195 Integrin-linked kinase 97.8 3.8E-06 8.3E-11 75.6 -0.4 84 439-523 195-280 (448)
469 PRK04750 ubiB putative ubiquin 97.8 1.9E-05 4.2E-10 81.2 4.3 88 432-520 118-251 (537)
470 KOG0671 LAMMER dual specificit 97.8 1.4E-05 3E-10 75.7 2.8 89 433-523 88-183 (415)
471 KOG1345 Serine/threonine kinas 97.7 2.2E-05 4.7E-10 71.0 2.6 87 434-521 24-113 (378)
472 PRK12274 serine/threonine prot 97.7 0.00018 3.8E-09 64.4 8.2 80 437-521 5-89 (218)
473 KOG0603 Ribosomal protein S6 k 97.7 2.8E-05 6.1E-10 78.5 3.2 87 433-523 321-409 (612)
474 PHA02882 putative serine/threo 97.6 0.00023 4.9E-09 68.7 8.8 88 434-522 12-118 (294)
475 PF13306 LRR_5: Leucine rich r 97.5 0.00023 5E-09 59.2 6.8 106 38-157 6-111 (129)
476 KOG3665 ZYG-1-like serine/thre 97.5 4E-05 8.6E-10 81.5 1.9 107 20-136 122-231 (699)
477 COG0515 SPS1 Serine/threonine 97.5 0.00045 9.8E-09 67.3 9.3 86 436-523 2-91 (384)
478 cd05119 RIO RIO kinase family, 97.5 0.00029 6.2E-09 62.9 7.1 73 439-515 2-100 (187)
479 KOG1163 Casein kinase (serine/ 97.4 0.00022 4.7E-09 63.6 5.4 87 432-521 13-101 (341)
480 PF13306 LRR_5: Leucine rich r 97.4 0.00048 1E-08 57.3 7.3 84 120-206 7-90 (129)
481 KOG1164 Casein kinase (serine/ 97.4 0.00042 9.2E-09 67.8 7.0 87 435-522 19-112 (322)
482 KOG3665 ZYG-1-like serine/thre 97.3 0.00011 2.3E-09 78.3 2.3 32 21-53 61-92 (699)
483 KOG0670 U4/U6-associated splic 97.3 0.00021 4.5E-09 70.5 3.5 88 435-524 433-527 (752)
484 PRK01723 3-deoxy-D-manno-octul 97.2 0.0013 2.8E-08 61.2 8.5 82 440-522 37-139 (239)
485 KOG2123 Uncharacterized conser 97.1 2.3E-05 5.1E-10 71.0 -4.5 100 43-155 18-123 (388)
486 KOG2739 Leucine-rich acidic nu 97.1 0.00031 6.8E-09 63.6 2.5 90 117-210 35-129 (260)
487 KOG2123 Uncharacterized conser 97.0 2.7E-05 5.9E-10 70.6 -4.8 99 196-298 18-123 (388)
488 KOG1166 Mitotic checkpoint ser 96.9 0.00046 9.9E-09 74.9 2.2 92 428-522 692-786 (974)
489 cd05154 ACAD10_11_like Acyl-Co 96.9 0.0014 3E-08 60.2 5.0 81 440-520 4-90 (223)
490 KOG1165 Casein kinase (serine/ 96.7 0.003 6.5E-08 59.3 5.7 85 434-521 28-114 (449)
491 cd05151 ChoK Choline Kinase (C 96.5 0.0045 9.7E-08 54.1 5.1 76 440-519 4-80 (170)
492 PF00560 LRR_1: Leucine Rich R 96.3 0.0017 3.6E-08 35.2 0.8 21 21-42 1-21 (22)
493 KOG0665 Jun-N-terminal kinase 96.1 0.0025 5.3E-08 59.5 1.5 87 434-522 17-112 (369)
494 COG0661 AarF Predicted unusual 95.5 0.023 5E-07 58.5 5.8 81 440-520 131-256 (517)
495 KOG4308 LRR-containing protein 95.3 9.3E-05 2E-09 75.3 -12.3 89 46-138 89-185 (478)
496 KOG1947 Leucine rich repeat pr 95.2 0.0014 3.1E-08 67.9 -4.3 174 43-233 187-374 (482)
497 COG2112 Predicted Ser/Thr prot 95.1 0.067 1.5E-06 46.2 6.4 78 437-520 25-102 (201)
498 KOG4341 F-box protein containi 95.1 0.0011 2.3E-08 64.0 -5.0 276 45-326 139-436 (483)
499 KOG3741 Poly(A) ribonuclease s 94.8 0.036 7.9E-07 55.5 4.5 75 446-520 288-368 (655)
500 KOG1235 Predicted unusual prot 94.6 0.045 9.8E-07 56.2 4.9 79 439-519 166-291 (538)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.1e-55 Score=492.16 Aligned_cols=487 Identities=28% Similarity=0.422 Sum_probs=332.3
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCC------------------CccccCccccCCCCCCCCEE
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESS------------------LADQWSFLSALTNCRHLKAL 81 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~------------------~~~~~~~~~~~~~l~~L~~L 81 (524)
++|+.|++++|++++.+|..+.++++|++|++++|.++.... +.+..| ..+.++++|+.|
T Consensus 260 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~--~~~~~l~~L~~L 337 (968)
T PLN00113 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIP--VALTSLPRLQVL 337 (968)
T ss_pred CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCC--hhHhcCCCCCEE
Confidence 566666666666666666666666666666666666543210 001112 334445555555
Q ss_pred EccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcc
Q 040301 82 SLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNL 161 (524)
Q Consensus 82 ~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i 161 (524)
++++|.+.+.+|..+..+. +|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+
T Consensus 338 ~L~~n~l~~~~p~~l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l 416 (968)
T PLN00113 338 QLWSNKFSGEIPKNLGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF 416 (968)
T ss_pred ECcCCCCcCcCChHHhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEe
Confidence 5555555555555555554 555555555555555555555555555555555555555555566666666666666666
Q ss_pred cccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCc
Q 040301 162 EGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNI 241 (524)
Q Consensus 162 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 241 (524)
++.+|..+..++.|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.+|..+ ..++|+.|++++|++.+..|..+
T Consensus 417 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~ 495 (968)
T PLN00113 417 SGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKL 495 (968)
T ss_pred eeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhh
Confidence 66666666666666666666666666666666666777777777777666655544 34678888888888888888888
Q ss_pred cCCCCCCEEEcCCCcCcccc-ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCe
Q 040301 242 QTLKVLRVLDLSRNQLSGDI-STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQ 320 (524)
Q Consensus 242 ~~l~~L~~L~l~~n~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 320 (524)
..+++|+.|++++|.+.+.. ..+..+++|+.|+|++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|+.
T Consensus 496 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 575 (968)
T PLN00113 496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575 (968)
T ss_pred hhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCE
Confidence 89999999999999998654 67888999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCcCccccCCCCcCCCCCcccccCCCCCCCCC-CCCCCCCCCCCccCccchheeeeeeccchhHHHHHHHHHHHhh
Q 040301 321 FNASHNRLEGKILVKGSFKNFSAESFFGNYALCGLP-KFRVPPCKQGDSKSTKNVALIVLKYILPPIVSSVLIVIIIIMY 399 (524)
Q Consensus 321 l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~lc~~p-~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (524)
+++++|++.+.+|..+.+..+....+.||+.+|+.+ ....++|.... .. ..+. ++++++ ++++++++++++++
T Consensus 576 l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~---~~-~~~~-~~~~~~-~~~~~~~~~~~~~~ 649 (968)
T PLN00113 576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVR---KT-PSWW-FYITCT-LGAFLVLALVAFGF 649 (968)
T ss_pred EeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcccc---cc-ceee-eehhHH-HHHHHHHHHHHHHH
Confidence 999999999999988888888888999999999854 34556775321 11 1111 222222 22222222222222
Q ss_pred hhhhcccCCCCCC-C--Cccc--c----ccccccchhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeecc
Q 040301 400 IRCRKRSTKKSDH-E--DFLP--L----ATWRRTSYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQ 469 (524)
Q Consensus 400 ~~~~~~~~~~~~~-~--~~~~--~----~~~~~~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~ 469 (524)
++++++++.+.++ + .... . .....++++++ ...+...+.+|+|+||.||+|+. .++..||||+++..
T Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~ 726 (968)
T PLN00113 650 VFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDV 726 (968)
T ss_pred HHHHhhhcccccccccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCC
Confidence 3333322211111 1 0000 0 00122333443 34567778999999999999996 57889999998643
Q ss_pred chHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 470 LERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 470 ~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.. ...+|++.+++++|||||+++|+|.+++..|+|||||++|+|.+++++
T Consensus 727 ~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~ 776 (968)
T PLN00113 727 NS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN 776 (968)
T ss_pred cc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc
Confidence 32 112468899999999999999999999999999999999999999864
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.5e-37 Score=346.51 Aligned_cols=330 Identities=36% Similarity=0.511 Sum_probs=231.9
Q ss_pred CCCCCCcCCCCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCC
Q 040301 11 HGDSPSIPHQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGG 90 (524)
Q Consensus 11 ~~~~~~~~~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 90 (524)
.|.+|....++|++|||++|.+++.+|..|+++++|++|+|++|.+.+. .| ..+.++++|++|+|++|.+.+
T Consensus 131 ~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~------~p--~~~~~l~~L~~L~L~~n~l~~ 202 (968)
T PLN00113 131 TGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK------IP--NSLTNLTSLEFLTLASNQLVG 202 (968)
T ss_pred ccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccccc------CC--hhhhhCcCCCeeeccCCCCcC
Confidence 3444555556777777777777777777777777777777777776532 23 667777777777777777777
Q ss_pred CCChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCcccc
Q 040301 91 ILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLC 170 (524)
Q Consensus 91 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 170 (524)
.+|..+..+. +|+.|++++|.+.+.+|..|+++++|++|++++|.+.+..|..++++++|+.|++++|.+.+.+|..+.
T Consensus 203 ~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~ 281 (968)
T PLN00113 203 QIPRELGQMK-SLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIF 281 (968)
T ss_pred cCChHHcCcC-CccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHh
Confidence 7777777776 777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEE
Q 040301 171 HLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVL 250 (524)
Q Consensus 171 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 250 (524)
.+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..++.+++|+.|
T Consensus 282 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L 361 (968)
T PLN00113 282 SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVL 361 (968)
T ss_pred hccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEE
Confidence 77777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred EcCCCcCcccc-ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCc
Q 040301 251 DLSRNQLSGDI-STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLE 329 (524)
Q Consensus 251 ~l~~n~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~ 329 (524)
++++|.+.+.. ..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|++++..|..+..++.|+.+++++|.++
T Consensus 362 ~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 441 (968)
T PLN00113 362 DLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQ 441 (968)
T ss_pred ECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCccc
Confidence 77777776433 44555566666666666666666666666666666666666666666666666666666666666666
Q ss_pred cccCCC-CcCCCCCcccccCC
Q 040301 330 GKILVK-GSFKNFSAESFFGN 349 (524)
Q Consensus 330 ~~~~~~-~~~~~~~~~~~~~n 349 (524)
+.++.. ..+..+..+++.+|
T Consensus 442 ~~~~~~~~~l~~L~~L~L~~n 462 (968)
T PLN00113 442 GRINSRKWDMPSLQMLSLARN 462 (968)
T ss_pred CccChhhccCCCCcEEECcCc
Confidence 554431 22334444444444
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=289.71 Aligned_cols=325 Identities=22% Similarity=0.205 Sum_probs=247.1
Q ss_pred CccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCc
Q 040301 21 IYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFS 100 (524)
Q Consensus 21 ~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 100 (524)
+++.|+|.+|.|+..-.+.++.++.|+.||||.|.|+.++. .+|..-.++++|+|++|.|+....+.|..+.
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~--------~sfp~~~ni~~L~La~N~It~l~~~~F~~ln 197 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPK--------PSFPAKVNIKKLNLASNRITTLETGHFDSLN 197 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccC--------CCCCCCCCceEEeeccccccccccccccccc
Confidence 46667777776665556666667777777777777776654 5565556788888888888877777777777
Q ss_pred ccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEc
Q 040301 101 ASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRL 180 (524)
Q Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l 180 (524)
+|..|.|+.|+++...+..|.+|++|+.|+|..|+|.-....+|.++++|+.|.|..|+|.......|..+.+++.|+|
T Consensus 198 -sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L 276 (873)
T KOG4194|consen 198 -SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNL 276 (873)
T ss_pred -hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeec
Confidence 7888888888888777777777888888888888877444567788888888888888888777778888888888888
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccc
Q 040301 181 TGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGD 260 (524)
Q Consensus 181 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 260 (524)
+.|++...-..++.++++|++|++++|.|...-++.+...++|+.|+|++|+++...++.|..+..|+.|+|++|.+..+
T Consensus 277 ~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l 356 (873)
T KOG4194|consen 277 ETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHL 356 (873)
T ss_pred ccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHH
Confidence 88888777777788888888888888888877677777788888888888888877777888888888888888888766
Q ss_pred c-ccccccCCCCEEEccCCcccCCCc---ccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCccccCCCC
Q 040301 261 I-STIGALVDLETLSLASNQFQGPIP---ESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLEGKILVKG 336 (524)
Q Consensus 261 ~-~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~ 336 (524)
. ..|..+.+|+.|+|++|.+++.+. ..|..+++|+.|++.+|++..+.-..|..++.|+.||+.+|++...-+..-
T Consensus 357 ~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAF 436 (873)
T KOG4194|consen 357 AEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAF 436 (873)
T ss_pred HhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeeccccc
Confidence 6 667788889999999998876543 346778899999999999986666788889999999999998865444332
Q ss_pred cCCCCCcccccCCCCCCC
Q 040301 337 SFKNFSAESFFGNYALCG 354 (524)
Q Consensus 337 ~~~~~~~~~~~~n~~lc~ 354 (524)
.-..+..+-+.....+|+
T Consensus 437 e~m~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 437 EPMELKELVMNSSSFLCD 454 (873)
T ss_pred ccchhhhhhhcccceEEe
Confidence 222444444444455554
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-35 Score=281.26 Aligned_cols=303 Identities=22% Similarity=0.210 Sum_probs=179.0
Q ss_pred CCCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhc
Q 040301 19 HQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGN 98 (524)
Q Consensus 19 ~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 98 (524)
++..+.||+|+|++....+..|-++++|+++.+..|.++.++.+. ....+|+.|+|.+|.|+..-...+..
T Consensus 77 p~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~---------~~sghl~~L~L~~N~I~sv~se~L~~ 147 (873)
T KOG4194|consen 77 PSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFG---------HESGHLEKLDLRHNLISSVTSEELSA 147 (873)
T ss_pred ccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhccccc---------ccccceeEEeeeccccccccHHHHHh
Confidence 467788999999999888999999999999999999999886422 22334666666666666555555555
Q ss_pred CcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEE
Q 040301 99 FSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGI 178 (524)
Q Consensus 99 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 178 (524)
++ .|+.|||+.|.++...-.+|..-.++++|+|++|+|+..-.+.|..+.+|..|.|+.|+++...+..|++++.|+.|
T Consensus 148 l~-alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~L 226 (873)
T KOG4194|consen 148 LP-ALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESL 226 (873)
T ss_pred Hh-hhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhh
Confidence 55 66666666666664444445555566666666666665555666666666666666666664444555556666666
Q ss_pred EccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCc
Q 040301 179 RLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLS 258 (524)
Q Consensus 179 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 258 (524)
+|..|+|.......|.++++|+.|.|..|.+...-...|..+.++++|+|..|++...-.+++-++..|+.|++++|.|.
T Consensus 227 dLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ 306 (873)
T KOG4194|consen 227 DLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQ 306 (873)
T ss_pred hccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhh
Confidence 66666665333444555555555555555555444445555555555555555555444444555555555555555554
Q ss_pred ccc-ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCccc
Q 040301 259 GDI-STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLEGK 331 (524)
Q Consensus 259 ~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~ 331 (524)
.+- +.+..+++|++|+|++|+++...+..|..+..|++|+|++|.++......|..+++|+.||++.|.+.+.
T Consensus 307 rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~ 380 (873)
T KOG4194|consen 307 RIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWC 380 (873)
T ss_pred eeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEE
Confidence 433 4444445555555555555544444444444444444444444433333444444444444444444433
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=4.2e-33 Score=270.65 Aligned_cols=346 Identities=24% Similarity=0.314 Sum_probs=246.0
Q ss_pred CCccCCCCCCCC-CCCc--CCCCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCC-----------------
Q 040301 2 GWRWGNHSPHGD-SPSI--PHQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESS----------------- 61 (524)
Q Consensus 2 ~~~~~~~~~~~~-~~~~--~~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~----------------- 61 (524)
|..+-+.+-+|+ .|+. .+++++.|-|.+.++. .+|+.++.+.+|+.|.+++|++..+.+
T Consensus 11 GvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~ 89 (1255)
T KOG0444|consen 11 GVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNN 89 (1255)
T ss_pred cccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhccc
Confidence 444555554433 3544 4566777777777776 677777777777777777777665520
Q ss_pred C-ccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCccc
Q 040301 62 L-ADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGT 140 (524)
Q Consensus 62 ~-~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 140 (524)
+ ...+| ..+-.+..|+.|||++|++. ..|..+.... ++..|+|++|+|..+...-|.+|+.|-.||||+|++. .
T Consensus 90 LKnsGiP--~diF~l~dLt~lDLShNqL~-EvP~~LE~AK-n~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~ 164 (1255)
T KOG0444|consen 90 LKNSGIP--TDIFRLKDLTILDLSHNQLR-EVPTNLEYAK-NSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-M 164 (1255)
T ss_pred cccCCCC--chhcccccceeeecchhhhh-hcchhhhhhc-CcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-h
Confidence 0 01233 45555666666666666666 4555565555 6666666666665444444556666666666666665 4
Q ss_pred CCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcc-cccCCccccCCCCCCEEEccCCcCCCccChhccC
Q 040301 141 ISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKL-SGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWS 219 (524)
Q Consensus 141 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l-~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 219 (524)
+|+....+..|+.|+|++|.+.-..-..+..+++|+.|.+++.+- ...+|.++..+.+|..+|++.|.+. .+|+.+..
T Consensus 165 LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~ 243 (1255)
T KOG0444|consen 165 LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYK 243 (1255)
T ss_pred cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhh
Confidence 455566666666666666666533334445555666666666542 2356778888899999999999998 78999999
Q ss_pred CCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEccCCcccC-CCcccccCCCCCCEEe
Q 040301 220 LEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSLASNQFQG-PIPESVGSLISLESLD 298 (524)
Q Consensus 220 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~ 298 (524)
+++|+.|+|++|+++ .+....+...+|++|++|+|+++..|..++.++.|+.|++.+|++.- -+|..++.+..|+.+.
T Consensus 244 l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~ 322 (1255)
T KOG0444|consen 244 LRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFH 322 (1255)
T ss_pred hhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHH
Confidence 999999999999998 45566677889999999999999999999999999999999998662 4789999999999999
Q ss_pred CCCCcCCCCCcccccCCCCCCeEEccCCcCccccCCCCcCCCCCcccccCCCCCCCCC
Q 040301 299 LSGNNLSGKIPKSLETLSHLKQFNASHNRLEGKILVKGSFKNFSAESFFGNYALCGLP 356 (524)
Q Consensus 299 l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~lc~~p 356 (524)
.++|.+. ..|+.+..+..|+.|.++.|.+.......-.+..+..+++-.|+.+.-.|
T Consensus 323 aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 323 AANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLVMPP 379 (1255)
T ss_pred hhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCccCCC
Confidence 9999998 88999999999999999999987544333446677788888887665433
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=8.9e-31 Score=254.54 Aligned_cols=294 Identities=28% Similarity=0.371 Sum_probs=254.4
Q ss_pred CCccEEEccCCccccc-CCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhc
Q 040301 20 QIYWVMDLSSNSFSGH-IPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGN 98 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 98 (524)
+.|+.+++..|++... +|..+..+..|..||||+|+++..+ ..+...+++-+|+|++|+|..++.+.|.+
T Consensus 78 p~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP---------~~LE~AKn~iVLNLS~N~IetIPn~lfin 148 (1255)
T KOG0444|consen 78 PRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVP---------TNLEYAKNSIVLNLSYNNIETIPNSLFIN 148 (1255)
T ss_pred hhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcc---------hhhhhhcCcEEEEcccCccccCCchHHHh
Confidence 5677888888887733 6778888999999999999998764 77888899999999999999777788888
Q ss_pred CcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCccc-ccCCccccCCCCCCE
Q 040301 99 FSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLE-GSIPYDLCHLKLMYG 177 (524)
Q Consensus 99 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~ 177 (524)
+. .|-.|+|++|++. .+|..+..|.+|++|.|++|.+....-..+-.+++|+.|.+++.+-+ ..+|.++..+.+|..
T Consensus 149 Lt-DLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~d 226 (1255)
T KOG0444|consen 149 LT-DLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRD 226 (1255)
T ss_pred hH-hHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhh
Confidence 87 8999999999998 56667899999999999999887544445556778888888887765 468999999999999
Q ss_pred EEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcC
Q 040301 178 IRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQL 257 (524)
Q Consensus 178 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 257 (524)
++++.|.+. .+|+.+.++++|+.|+|++|+++ .+.-....+.+|++|+|+.|+++ .+|..+..++.|+.|++.+|++
T Consensus 227 vDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL 303 (1255)
T KOG0444|consen 227 VDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKL 303 (1255)
T ss_pred ccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcc
Confidence 999999998 78999999999999999999998 55556677889999999999998 6899999999999999999986
Q ss_pred --ccccccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCc
Q 040301 258 --SGDISTIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLE 329 (524)
Q Consensus 258 --~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~ 329 (524)
.|+|+.++.+.+|+++..++|.+. ..|..+..|++|+.|.|+.|++- ..|+.+.-++.|+.||+..|+=-
T Consensus 304 ~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 304 TFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred cccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCc
Confidence 577788999999999999999998 89999999999999999999988 78999999999999999999743
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.93 E-value=1.9e-28 Score=226.92 Aligned_cols=299 Identities=26% Similarity=0.383 Sum_probs=188.8
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccc---------------cCccccCCCCCCCCEEEcc
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQ---------------WSFLSALTNCRHLKALSLG 84 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~---------------~~~~~~~~~l~~L~~L~l~ 84 (524)
+.|+.||.-.|-++ .+|..++.+.+|+.|+|.+|++...+.+.|- +| -...+++.+|.+|||+
T Consensus 183 ~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lp-ae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLP-AEHLKHLNSLLVLDLR 260 (565)
T ss_pred HHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhH-HHHhcccccceeeecc
Confidence 45555555555554 5555555555555555555555554321110 00 0223456666666666
Q ss_pred CCCCCCCCChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCC----------------------
Q 040301 85 SNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTIS---------------------- 142 (524)
Q Consensus 85 ~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~---------------------- 142 (524)
+|+++ ..|+.+..+. +|+.|++++|.++ ..|.+++++ +|+.|-+.+|.+..+-.
T Consensus 261 dNklk-e~Pde~clLr-sL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dg 336 (565)
T KOG0472|consen 261 DNKLK-EVPDEICLLR-SLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDG 336 (565)
T ss_pred ccccc-cCchHHHHhh-hhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCC
Confidence 66666 5566666665 6666666666666 455566666 66666666665431000
Q ss_pred -------------------ccccCCCCCCeEecccCcccccCCccccCCC---CCCEEEccCCcccccCCccccCCCCC-
Q 040301 143 -------------------PTMGRLKQLRGLSLKYNNLEGSIPYDLCHLK---LMYGIRLTGNKLSGHIPPCLASLTSL- 199 (524)
Q Consensus 143 -------------------~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~---~L~~L~l~~n~l~~~~~~~~~~l~~L- 199 (524)
.....+.+.+.|++++-+++ .+|+.+..-- -...++++.|++. .+|..+..+..+
T Consensus 337 lS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelv 414 (565)
T KOG0472|consen 337 LSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELV 414 (565)
T ss_pred CCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHH
Confidence 00111223445555555555 3443332222 2455566666665 455444444433
Q ss_pred CEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEccCCc
Q 040301 200 RELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSLASNQ 279 (524)
Q Consensus 200 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~ 279 (524)
+.+.+++|.+. .+|..++.+++|..|+|++|-+. .+|..++.+..|+.|+++.|.+...|.....+..++.+-.++|+
T Consensus 415 T~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nq 492 (565)
T KOG0472|consen 415 TDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQ 492 (565)
T ss_pred HHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhcccc
Confidence 23444555543 66777788888888888888887 57888888888888999888888777766666677777777888
Q ss_pred ccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCc
Q 040301 280 FQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLE 329 (524)
Q Consensus 280 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~ 329 (524)
+....|+.+.++.+|.+||+.+|.+. .+|..++++.+|+++.+.+|+|.
T Consensus 493 i~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 493 IGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 88766677888999999999999988 78888999999999999999886
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.93 E-value=1.6e-28 Score=227.47 Aligned_cols=310 Identities=26% Similarity=0.398 Sum_probs=172.1
Q ss_pred ccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCcc
Q 040301 22 YWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSA 101 (524)
Q Consensus 22 l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 101 (524)
++.|++++|.+. ..|..++.+..|+.|+..+|+++..+ +.+.++.+|..|++.+|++....|..+. +.
T Consensus 116 l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~slp---------~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~- 183 (565)
T KOG0472|consen 116 LVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQISSLP---------EDMVNLSKLSKLDLEGNKLKALPENHIA-MK- 183 (565)
T ss_pred hhhhhcccccee-ecCchHHHHhhhhhhhccccccccCc---------hHHHHHHHHHHhhccccchhhCCHHHHH-HH-
Confidence 333444444443 33334444444444444444443322 4455555555566666665544443333 44
Q ss_pred cccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccc-cCCCCCCEEEc
Q 040301 102 SFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDL-CHLKLMYGIRL 180 (524)
Q Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~l 180 (524)
.|++|++.+|-+. .+|..++.+.+|..|+|..|++. .+| .|..+..|.+|+++.|+|+ .+|.+. .+++++..|++
T Consensus 184 ~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDL 259 (565)
T KOG0472|consen 184 RLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDL 259 (565)
T ss_pred HHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeec
Confidence 6666666666655 45566666666666666666665 344 5555555666655555555 333332 35556666666
Q ss_pred cCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcc-------------------------
Q 040301 181 TGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLND------------------------- 235 (524)
Q Consensus 181 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~------------------------- 235 (524)
.+|+++ ..|+.+..+.+|+.||+++|.++ .+|..++++ .|+.|.+.+|.+..
T Consensus 260 RdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dg 336 (565)
T KOG0472|consen 260 RDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDG 336 (565)
T ss_pred cccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCC
Confidence 666655 45555555555666666666555 345555555 55555555554320
Q ss_pred ------------c-CCcCcc---CCCC--------------------------CCEEEcCCCcCcccc------------
Q 040301 236 ------------S-LPSNIQ---TLKV--------------------------LRVLDLSRNQLSGDI------------ 261 (524)
Q Consensus 236 ------------~-~~~~~~---~l~~--------------------------L~~L~l~~n~l~~~~------------ 261 (524)
. .+..+. .+.+ ....+++.|++.+.|
T Consensus 337 lS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~ 416 (565)
T KOG0472|consen 337 LSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTD 416 (565)
T ss_pred CCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHH
Confidence 0 000000 0001 122333444333221
Q ss_pred ------------ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCC-----------------------C
Q 040301 262 ------------STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLS-----------------------G 306 (524)
Q Consensus 262 ------------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-----------------------~ 306 (524)
..++.+++|..|+|++|.+. .+|..++.+..|+.||+++|+|. .
T Consensus 417 l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~ 495 (565)
T KOG0472|consen 417 LVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGS 495 (565)
T ss_pred HHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccc
Confidence 22344567777777777776 56777777777777777777664 2
Q ss_pred CCcccccCCCCCCeEEccCCcCccccCCCCcCCCCCcccccCCCC
Q 040301 307 KIPKSLETLSHLKQFNASHNRLEGKILVKGSFKNFSAESFFGNYA 351 (524)
Q Consensus 307 ~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~ 351 (524)
..|+.+..+.+|..+|+.+|.+....|..|...++..+++.||+.
T Consensus 496 vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 496 VDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred cChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 223346677889999999999887777777888888888888864
No 9
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=7.9e-23 Score=230.09 Aligned_cols=288 Identities=20% Similarity=0.239 Sum_probs=153.5
Q ss_pred CCCCccEEEccCCcccccCCcccccccCCCEEEccccc-cCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhH
Q 040301 18 PHQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNN-LTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVI 96 (524)
Q Consensus 18 ~~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 96 (524)
.+++|+.|++++|++. .+|..+..+++|++|+|+++. ++.+ +.++.+++|++|+|++|.....+|..+
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~i----------p~ls~l~~Le~L~L~~c~~L~~lp~si 677 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEI----------PDLSMATNLETLKLSDCSSLVELPSSI 677 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcC----------CccccCCcccEEEecCCCCccccchhh
Confidence 3445555555555554 444455555555555555442 2221 224445555555555554444455555
Q ss_pred hcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCC
Q 040301 97 GNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMY 176 (524)
Q Consensus 97 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 176 (524)
..+. +|+.|++++|.....+|..+ ++++|+.|++++|......|.. .++|++|++++|.++ .+|..+ .+++|+
T Consensus 678 ~~L~-~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~ 750 (1153)
T PLN03210 678 QYLN-KLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLD 750 (1153)
T ss_pred hccC-CCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccc
Confidence 5554 55555555554333444433 4555555555555433333321 234555555555554 334332 344555
Q ss_pred EEEccCCccc-------ccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCE
Q 040301 177 GIRLTGNKLS-------GHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRV 249 (524)
Q Consensus 177 ~L~l~~n~l~-------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 249 (524)
.|.+.++... ...+..+...++|+.|++++|.....+|..+..+++|+.|++++|...+.+|..+ .+++|+.
T Consensus 751 ~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~ 829 (1153)
T PLN03210 751 ELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLES 829 (1153)
T ss_pred cccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCE
Confidence 5555442211 0111112223566777777766555667777777777777777764444555544 5677777
Q ss_pred EEcCCCcCccccccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCc
Q 040301 250 LDLSRNQLSGDISTIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNR 327 (524)
Q Consensus 250 L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~ 327 (524)
|++++|........ ...+|+.|+|++|.++ .+|.++..+++|+.|++++|.-...+|..+..+++|+.++++++.
T Consensus 830 L~Ls~c~~L~~~p~--~~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 830 LDLSGCSRLRTFPD--ISTNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred EECCCCCccccccc--cccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 77776543221111 1246777777777776 466777777777777777744333566666667777777766653
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3.8e-22 Score=224.59 Aligned_cols=308 Identities=19% Similarity=0.207 Sum_probs=219.8
Q ss_pred CCCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhc
Q 040301 19 HQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGN 98 (524)
Q Consensus 19 ~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 98 (524)
+.+|+.|++.++.++ .+|..| ...+|++|++++|++..++ ..+..+++|+.|+|+++.....+|. +..
T Consensus 588 p~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~L~---------~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~ 655 (1153)
T PLN03210 588 PPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEKLW---------DGVHSLTGLRNIDLRGSKNLKEIPD-LSM 655 (1153)
T ss_pred CcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccccc---------cccccCCCCCEEECCCCCCcCcCCc-ccc
Confidence 356777777777776 666666 4577888888888776543 4566778888888887765445553 556
Q ss_pred CcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEE
Q 040301 99 FSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGI 178 (524)
Q Consensus 99 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 178 (524)
++ +|+.|++.+|.....+|..+.++++|+.|++++|.....+|..+ ++++|+.|++++|.....+|.. .++|+.|
T Consensus 656 l~-~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L 730 (1153)
T PLN03210 656 AT-NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWL 730 (1153)
T ss_pred CC-cccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCee
Confidence 65 88888888887666788888888888888888875544556544 6788888888887655455543 3567888
Q ss_pred EccCCcccccCCccccCCCCCCEEEccCCcCC-------CccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEE
Q 040301 179 RLTGNKLSGHIPPCLASLTSLRELHLGSNKLT-------SSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLD 251 (524)
Q Consensus 179 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 251 (524)
++++|.+. .+|..+ .+++|+.|++.++... ...+..+...++|+.|++++|.....+|..++++++|+.|+
T Consensus 731 ~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~ 808 (1153)
T PLN03210 731 DLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLE 808 (1153)
T ss_pred ecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEE
Confidence 88888876 455544 4677777777664321 11122233457899999999987778999999999999999
Q ss_pred cCCCc-CccccccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCC-cCc
Q 040301 252 LSRNQ-LSGDISTIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHN-RLE 329 (524)
Q Consensus 252 l~~n~-l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n-~l~ 329 (524)
+++|. +...+..+ .+++|+.|++++|.....+|.. .++|+.|++++|.++ .+|.++..+++|+.|++++| .+.
T Consensus 809 Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~ 883 (1153)
T PLN03210 809 IENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ 883 (1153)
T ss_pred CCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC
Confidence 99874 55444433 6889999999998655556543 468999999999998 78999999999999999984 555
Q ss_pred cccCCCCcCCCCCcccccCCC
Q 040301 330 GKILVKGSFKNFSAESFFGNY 350 (524)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~n~ 350 (524)
........+..+..+++.+..
T Consensus 884 ~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 884 RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccCcccccccCCCeeecCCCc
Confidence 433333445555555555443
No 11
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=9.4e-23 Score=213.70 Aligned_cols=262 Identities=25% Similarity=0.352 Sum_probs=207.3
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcC
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNF 99 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 99 (524)
..-..||+++|+++ .+|..+. ++|+.|++++|+++.++. ..++|++|++++|+++.. |..
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~LP~------------lp~~Lk~LdLs~N~LtsL-P~l---- 260 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA------------LPPELRTLEVSGNQLTSL-PVL---- 260 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCCCC------------CCCCCcEEEecCCccCcc-cCc----
Confidence 45778999999999 7888775 489999999999987642 147899999999999954 532
Q ss_pred cccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEE
Q 040301 100 SASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIR 179 (524)
Q Consensus 100 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 179 (524)
..+|+.|++++|.+.. +|.. ..+|+.|++++|+++. +|. ..++|+.|++++|.+++ +|.. ..+|+.|+
T Consensus 261 p~sL~~L~Ls~N~L~~-Lp~l---p~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~ 328 (788)
T PRK15387 261 PPGLLELSIFSNPLTH-LPAL---PSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLW 328 (788)
T ss_pred ccccceeeccCCchhh-hhhc---hhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccc
Confidence 2389999999999873 4442 3578899999999984 443 35789999999999984 4542 24578899
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCcc
Q 040301 180 LTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSG 259 (524)
Q Consensus 180 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 259 (524)
+++|.+.+ +|.. ..+|+.|++++|++++ +|.. .++|+.|++++|.+.. +|.. ..+|+.|++++|.+++
T Consensus 329 Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~ 396 (788)
T PRK15387 329 AYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS 396 (788)
T ss_pred cccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC
Confidence 99999974 5542 2479999999999984 5543 3578889999999984 6653 3579999999999987
Q ss_pred ccccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCccccC
Q 040301 260 DISTIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLEGKIL 333 (524)
Q Consensus 260 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 333 (524)
.+.. .++|+.|++++|+++. +|.. ..+|+.|++++|+++ .+|..+..+++|+.+++++|++++..+
T Consensus 397 LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 397 LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHH
Confidence 6643 3579999999999984 6653 347889999999998 789999999999999999999987654
No 12
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.89 E-value=2.4e-25 Score=226.36 Aligned_cols=319 Identities=27% Similarity=0.352 Sum_probs=214.8
Q ss_pred CCCccEEEccCCcccccCCcccccccCCCEEEccccccCCCC------------------------------------CC
Q 040301 19 HQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTES------------------------------------SL 62 (524)
Q Consensus 19 ~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~------------------------------------~~ 62 (524)
+.+|++|.|..|.+. ..|.++..+.+|++|++++|.+..++ .+
T Consensus 90 ~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l 168 (1081)
T KOG0618|consen 90 MRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVL 168 (1081)
T ss_pred hhcchhheeccchhh-cCchhHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhc
Confidence 356777777766666 66777777777777777777666552 11
Q ss_pred ccccCccccCCCCCCCCEEEccCCCCCCCCChhHhc----------------CcccccEEEeccCcccccCCccccCCCC
Q 040301 63 ADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGN----------------FSASFQNFYAFNCKLKGNIPQEIGNLRG 126 (524)
Q Consensus 63 ~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 126 (524)
.+.++ ..+..+++ .|||++|.+....-..+.+ .-.+++.|+.++|.++...+. .--.+
T Consensus 169 ~~~~~--~~i~~l~~--~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~--p~p~n 242 (1081)
T KOG0618|consen 169 GGSFL--IDIYNLTH--QLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH--PVPLN 242 (1081)
T ss_pred ccchh--cchhhhhe--eeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccc--ccccc
Confidence 11111 22222222 3666666655111001000 001344444455554422211 12356
Q ss_pred CCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 040301 127 LTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGS 206 (524)
Q Consensus 127 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 206 (524)
|+++++++|++++ +|.+++.+.+|+.|.+.+|+++ .+|..+....+|+.|.+.+|.+. .+|.....+.+|++|+|..
T Consensus 243 l~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 243 LQYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred ceeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehh
Confidence 8888888888874 4588888888888888888886 67777788888888888888876 5666677788888888888
Q ss_pred CcCCCccChhc-cC-------------------------CCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccc
Q 040301 207 NKLTSSIPSSL-WS-------------------------LEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGD 260 (524)
Q Consensus 207 n~l~~~~~~~~-~~-------------------------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 260 (524)
|++.. .|+.+ .- .+.|+.|++.+|.+++..-+.+.++.+|+.|+|++|.+...
T Consensus 320 N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~f 398 (1081)
T KOG0618|consen 320 NNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSF 398 (1081)
T ss_pred ccccc-cchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccC
Confidence 88763 33311 11 23466778888888877666778888999999999988877
Q ss_pred c-ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCccccCC-CCcC
Q 040301 261 I-STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLEGKILV-KGSF 338 (524)
Q Consensus 261 ~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~ 338 (524)
+ ..+.++..|++|+|++|+++ .+|+.+..++.|++|...+|++. ..| .+..++.|+.+|++.|.++-.... .-.+
T Consensus 399 pas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~ 475 (1081)
T KOG0618|consen 399 PASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS 475 (1081)
T ss_pred CHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC
Confidence 7 66788888899999999888 57788888888888888888887 566 677888888888888887754332 2233
Q ss_pred CCCCcccccCCCC
Q 040301 339 KNFSAESFFGNYA 351 (524)
Q Consensus 339 ~~~~~~~~~~n~~ 351 (524)
++++.+++.||..
T Consensus 476 p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 476 PNLKYLDLSGNTR 488 (1081)
T ss_pred cccceeeccCCcc
Confidence 6777888888864
No 13
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=1.3e-25 Score=207.95 Aligned_cols=300 Identities=19% Similarity=0.226 Sum_probs=216.6
Q ss_pred cEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCccc
Q 040301 23 WVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSAS 102 (524)
Q Consensus 23 ~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~ 102 (524)
..+|-++-.++ ++|..+. +...+++|.+|+|+.++. ++|+.+++|+.|||++|+|+.+.|+.|..+. +
T Consensus 49 ~~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~--------~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~-~ 116 (498)
T KOG4237|consen 49 GIVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPP--------GAFKTLHRLRRLDLSKNNISFIAPDAFKGLA-S 116 (498)
T ss_pred ceEEccCCCcc-cCcccCC--CcceEEEeccCCcccCCh--------hhccchhhhceecccccchhhcChHhhhhhH-h
Confidence 45777777777 6776642 267888888888888876 8888888888888888888888888888887 6
Q ss_pred ccEEEecc-CcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEcc
Q 040301 103 FQNFYAFN-CKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLT 181 (524)
Q Consensus 103 L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~ 181 (524)
+..|.+.+ |+|+....+.|++|..|+.|.+.-|++..+...+|..+++|..|.+-+|.+...--..|..+..++.+.+.
T Consensus 117 l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA 196 (498)
T KOG4237|consen 117 LLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLA 196 (498)
T ss_pred hhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhh
Confidence 66665555 88887777778888888888888888888888888888888888888888873333377888888888887
Q ss_pred CCccc------------ccCCccccCCCCCCEEEccCCcCCCccChhccC-CCCCCEEEcCCCcCcccCC-cCccCCCCC
Q 040301 182 GNKLS------------GHIPPCLASLTSLRELHLGSNKLTSSIPSSLWS-LEYILMINLSSNSLNDSLP-SNIQTLKVL 247 (524)
Q Consensus 182 ~n~l~------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~-~~~~~l~~L 247 (524)
.|.+. -..|..++...-..-..+.+.++..+-+..|.. +..+..--.+.+...+..| ..|..+++|
T Consensus 197 ~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 197 QNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred cCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 77621 112333333333333344444444333333221 1111111112222222333 347888999
Q ss_pred CEEEcCCCcCcccc-ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCC
Q 040301 248 RVLDLSRNQLSGDI-STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHN 326 (524)
Q Consensus 248 ~~L~l~~n~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n 326 (524)
+.|++++|+++.+. .+|.+...+++|.|..|++.......|..+..|++|+|.+|+|+...|..|..+.+|..+++-.|
T Consensus 277 ~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~N 356 (498)
T KOG4237|consen 277 RKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSN 356 (498)
T ss_pred eEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccC
Confidence 99999999988776 67888888999999999988777788888999999999999999888889999999999999999
Q ss_pred cCccccCC
Q 040301 327 RLEGKILV 334 (524)
Q Consensus 327 ~l~~~~~~ 334 (524)
++.|.+..
T Consensus 357 p~~CnC~l 364 (498)
T KOG4237|consen 357 PFNCNCRL 364 (498)
T ss_pred cccCccch
Confidence 98877654
No 14
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=8.2e-22 Score=206.65 Aligned_cols=252 Identities=27% Similarity=0.308 Sum_probs=199.7
Q ss_pred CCCcCCCCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCC
Q 040301 14 SPSIPHQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILP 93 (524)
Q Consensus 14 ~~~~~~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 93 (524)
.|...+.+|+.|++++|+++ .+|.. .++|++|++++|+++.++. . .++|+.|++++|.+.. +|
T Consensus 216 LP~~l~~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~LtsLP~---------l---p~sL~~L~Ls~N~L~~-Lp 278 (788)
T PRK15387 216 LPDCLPAHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTSLPV---------L---PPGLLELSIFSNPLTH-LP 278 (788)
T ss_pred CCcchhcCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCcccC---------c---ccccceeeccCCchhh-hh
Confidence 34443468999999999999 57753 5799999999999997642 1 3679999999999984 34
Q ss_pred hhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCC
Q 040301 94 PVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLK 173 (524)
Q Consensus 94 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 173 (524)
..+ .+|+.|++++|+++. +|. .+++|+.|++++|++.+. |.. ..+|+.|++++|.++ .+|.. ..
T Consensus 279 ~lp----~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~-~LP~l---p~ 342 (788)
T PRK15387 279 ALP----SGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLT-SLPTL---PS 342 (788)
T ss_pred hch----hhcCEEECcCCcccc-ccc---cccccceeECCCCccccC-CCC---cccccccccccCccc-ccccc---cc
Confidence 322 378999999999984 554 357899999999999854 432 246889999999998 45542 24
Q ss_pred CCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcC
Q 040301 174 LMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLS 253 (524)
Q Consensus 174 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 253 (524)
+|+.|++++|++++ +|.. ..+|+.|++++|.+.. +|.. ..+|+.|++++|.+.+ +|.. .++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVS 410 (788)
T ss_pred ccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEcc
Confidence 79999999999984 5543 3578889999999984 5653 3579999999999985 5543 3689999999
Q ss_pred CCcCccccccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccC
Q 040301 254 RNQLSGDISTIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLET 314 (524)
Q Consensus 254 ~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 314 (524)
+|.+++++.. ..+|+.|++++|+++ .+|..+..+++|+.|+|++|++++..+..+..
T Consensus 411 ~N~LssIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 411 GNRLTSLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred CCcCCCCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 9999987643 346889999999998 68999999999999999999999887776643
No 15
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.85 E-value=1.6e-23 Score=194.18 Aligned_cols=284 Identities=24% Similarity=0.255 Sum_probs=227.4
Q ss_pred CCCcCCCCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccC-CCCCCCC
Q 040301 14 SPSIPHQIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGS-NPLGGIL 92 (524)
Q Consensus 14 ~~~~~~~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~-n~l~~~~ 92 (524)
+|.--+...++++|..|+|+...|..|+.+++|+.||||.|.|+.+.. .+|.++++|..|-+.+ |+|+...
T Consensus 61 VP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p--------~AF~GL~~l~~Lvlyg~NkI~~l~ 132 (498)
T KOG4237|consen 61 VPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAP--------DAFKGLASLLSLVLYGNNKITDLP 132 (498)
T ss_pred CcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcCh--------HhhhhhHhhhHHHhhcCCchhhhh
Confidence 344456788999999999998899999999999999999999999864 8999999998887777 9999777
Q ss_pred ChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCccc----------
Q 040301 93 PPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLE---------- 162 (524)
Q Consensus 93 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~---------- 162 (524)
...|+.+. .++.|.+.-|++.-...+.|..+++|..|.+..|.+..+--..|..+..++.+.+..|.+-
T Consensus 133 k~~F~gL~-slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~ 211 (498)
T KOG4237|consen 133 KGAFGGLS-SLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLAD 211 (498)
T ss_pred hhHhhhHH-HHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhh
Confidence 78999998 9999999999999888999999999999999999998655568999999999999888833
Q ss_pred --ccCCccccCCCCCCEEEccCCcccccCCccccC-CCCCCEEEccCCcCCCccC-hhccCCCCCCEEEcCCCcCcccCC
Q 040301 163 --GSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLAS-LTSLRELHLGSNKLTSSIP-SSLWSLEYILMINLSSNSLNDSLP 238 (524)
Q Consensus 163 --~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~ 238 (524)
...|..++...-..-..+.++++.-..+..|.. +.++..-..+.+...+..| ..|..+++|+.|+|++|.+++.-+
T Consensus 212 ~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~ 291 (498)
T KOG4237|consen 212 DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIED 291 (498)
T ss_pred HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhh
Confidence 122333333333334444555554333332221 1122111122333333444 568899999999999999999999
Q ss_pred cCccCCCCCCEEEcCCCcCcccc-ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCC
Q 040301 239 SNIQTLKVLRVLDLSRNQLSGDI-STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSG 306 (524)
Q Consensus 239 ~~~~~l~~L~~L~l~~n~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 306 (524)
.+|..+..++.|.|..|++.... ..|.++..|++|+|.+|+|+...|..|..+.+|.+|++-.|.+..
T Consensus 292 ~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 292 GAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred hhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccC
Confidence 99999999999999999998766 678899999999999999999999999999999999999999863
No 16
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=7.5e-21 Score=200.74 Aligned_cols=247 Identities=24% Similarity=0.387 Sum_probs=181.2
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcC
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNF 99 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 99 (524)
.+.+.|++++++++ .+|..+. ++|+.|+|++|+++.++. .+. ++|++|++++|.++. +|..+.
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~LtsLP~---------~l~--~nL~~L~Ls~N~Lts-LP~~l~-- 240 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKSLPE---------NLQ--GNIKTLYANSNQLTS-IPATLP-- 240 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCcCCh---------hhc--cCCCEEECCCCcccc-CChhhh--
Confidence 57889999999998 6777664 489999999999987652 222 479999999999984 565543
Q ss_pred cccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEE
Q 040301 100 SASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIR 179 (524)
Q Consensus 100 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 179 (524)
.+|+.|++++|++. .+|..+. .+|+.|++++|++.. +|..+. ++|+.|++++|.++ .+|..+. ++|+.|+
T Consensus 241 -~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~ 310 (754)
T PRK15370 241 -DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLN 310 (754)
T ss_pred -ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccc-cCcccch--hhHHHHH
Confidence 27899999999988 5676554 579999999999884 565443 58999999999888 4555443 4688888
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCcc
Q 040301 180 LTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSG 259 (524)
Q Consensus 180 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 259 (524)
+++|.+.. +|..+ .++|+.|++++|.+++ +|..+ .++|+.|++++|++. .+|..+ .++|+.|++++|.++.
T Consensus 311 Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt~ 381 (754)
T PRK15370 311 VQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASL--PPELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALTN 381 (754)
T ss_pred hcCCcccc-CCccc--cccceeccccCCcccc-CChhh--cCcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCCC
Confidence 88888874 45433 2578888888888874 56544 267888888888887 356544 2578888888888877
Q ss_pred ccccccccCCCCEEEccCCcccCCCcccc----cCCCCCCEEeCCCCcCC
Q 040301 260 DISTIGALVDLETLSLASNQFQGPIPESV----GSLISLESLDLSGNNLS 305 (524)
Q Consensus 260 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~l~~L~~L~l~~N~l~ 305 (524)
.+..+. ..|+.|++++|++. .+|..+ ..++++..|++.+|.++
T Consensus 382 LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 382 LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 665443 25778888888887 445443 33467788888888876
No 17
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.84 E-value=4.6e-23 Score=209.88 Aligned_cols=299 Identities=29% Similarity=0.323 Sum_probs=187.2
Q ss_pred CCccE-EEccCCcccccCCcccccccCCCEEEccccccCCCCCCcccc--------Ccc--ccCCCCCCCCEEEccCCCC
Q 040301 20 QIYWV-MDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQW--------SFL--SALTNCRHLKALSLGSNPL 88 (524)
Q Consensus 20 ~~l~~-Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--------~~~--~~~~~l~~L~~L~l~~n~l 88 (524)
.+++. |||.+|.+. . -...++++|+.|..+.|++..+..-.... |+. .....-.+|+++|+++|++
T Consensus 177 ~~l~~~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l 253 (1081)
T KOG0618|consen 177 YNLTHQLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNL 253 (1081)
T ss_pred hhhheeeecccchhh-h--hhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhh
Confidence 34555 999999887 2 23566778888888888887653200000 000 0001113344444444444
Q ss_pred CCCCChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCcc
Q 040301 89 GGILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYD 168 (524)
Q Consensus 89 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 168 (524)
.+ +|+.+.... +|+.+...+|++. .+|..+.....|+.|++..|.+..+ |..+..+..|+.|+|..|.+. ..|+.
T Consensus 254 ~~-lp~wi~~~~-nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yi-p~~le~~~sL~tLdL~~N~L~-~lp~~ 328 (1081)
T KOG0618|consen 254 SN-LPEWIGACA-NLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYI-PPFLEGLKSLRTLDLQSNNLP-SLPDN 328 (1081)
T ss_pred hc-chHHHHhcc-cceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhC-CCcccccceeeeeeehhcccc-ccchH
Confidence 42 234444443 4444444444442 3444444444444444444444422 233444445555555555554 22222
Q ss_pred c-cCCCC-CCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCC
Q 040301 169 L-CHLKL-MYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKV 246 (524)
Q Consensus 169 ~-~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 246 (524)
+ ..... |+.|..+.|.+.......=..++.|+.|++.+|.++...-..+...++|+.|+|++|++.......+.++..
T Consensus 329 ~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~ 408 (1081)
T KOG0618|consen 329 FLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEE 408 (1081)
T ss_pred HHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHH
Confidence 2 11111 334444444443111111123467888999999998777778889999999999999998766667889999
Q ss_pred CCEEEcCCCcCccccccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCC
Q 040301 247 LRVLDLSRNQLSGDISTIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHN 326 (524)
Q Consensus 247 L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n 326 (524)
|++|+||+|+++.++..+..++.|++|...+|++. ..| .+..++.|+.+|++.|.++...-......++|++||+++|
T Consensus 409 LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN 486 (1081)
T KOG0618|consen 409 LEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGN 486 (1081)
T ss_pred hHHHhcccchhhhhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCC
Confidence 99999999999999988889999999999999998 677 7889999999999999998443222233389999999999
Q ss_pred cC
Q 040301 327 RL 328 (524)
Q Consensus 327 ~l 328 (524)
..
T Consensus 487 ~~ 488 (1081)
T KOG0618|consen 487 TR 488 (1081)
T ss_pred cc
Confidence 73
No 18
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.82 E-value=3.9e-20 Score=195.35 Aligned_cols=248 Identities=24% Similarity=0.384 Sum_probs=195.4
Q ss_pred cCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccccC
Q 040301 44 RHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGN 123 (524)
Q Consensus 44 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 123 (524)
.+...|++++++++.++. .+. ++|+.|+|++|+++. +|..+. . +|+.|++++|+++ .+|..+.
T Consensus 178 ~~~~~L~L~~~~LtsLP~---------~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~-nL~~L~Ls~N~Lt-sLP~~l~- 240 (754)
T PRK15370 178 NNKTELRLKILGLTTIPA---------CIP--EQITTLILDNNELKS-LPENLQ--G-NIKTLYANSNQLT-SIPATLP- 240 (754)
T ss_pred cCceEEEeCCCCcCcCCc---------ccc--cCCcEEEecCCCCCc-CChhhc--c-CCCEEECCCCccc-cCChhhh-
Confidence 357899999999987652 232 579999999999994 555443 3 8999999999998 4666554
Q ss_pred CCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEE
Q 040301 124 LRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELH 203 (524)
Q Consensus 124 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 203 (524)
.+|+.|++++|++. .+|..+. .+|+.|++++|.++ .+|..+. ++|+.|++++|+++. +|..+. ++|+.|+
T Consensus 241 -~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~ 310 (754)
T PRK15370 241 -DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLN 310 (754)
T ss_pred -ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHH
Confidence 47999999999998 5565553 58999999999998 5677654 589999999999984 554443 4789999
Q ss_pred ccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEccCCcccCC
Q 040301 204 LGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSLASNQFQGP 283 (524)
Q Consensus 204 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~ 283 (524)
+++|.+.. +|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++..+..+ .++|+.|+|++|+++ .
T Consensus 311 Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~~LP~~l--p~~L~~LdLs~N~Lt-~ 381 (754)
T PRK15370 311 VQSNSLTA-LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQITVLPETL--PPTITTLDVSRNALT-N 381 (754)
T ss_pred hcCCcccc-CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCCcCChhh--cCCcCEEECCCCcCC-C
Confidence 99999984 55543 3689999999999985 666553 79999999999998776544 368999999999999 4
Q ss_pred CcccccCCCCCCEEeCCCCcCCCCCccccc----CCCCCCeEEccCCcCcc
Q 040301 284 IPESVGSLISLESLDLSGNNLSGKIPKSLE----TLSHLKQFNASHNRLEG 330 (524)
Q Consensus 284 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~----~l~~L~~l~l~~n~l~~ 330 (524)
+|..+. .+|+.|++++|++. .+|..+. .++.+..+++.+|+++.
T Consensus 382 LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 382 LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 666554 37999999999998 5565443 45788999999999864
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.80 E-value=7e-21 Score=186.69 Aligned_cols=282 Identities=27% Similarity=0.345 Sum_probs=159.3
Q ss_pred EEEccCCccc-ccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCccc
Q 040301 24 VMDLSSNSFS-GHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSAS 102 (524)
Q Consensus 24 ~Ldls~n~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~ 102 (524)
.|+|++++++ ...+..|..+.+|++|+++++.++.... ..++ ..+...++|++|+++++.+.+. +..+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~--~~i~--~~l~~~~~l~~l~l~~~~~~~~-~~~~~----- 71 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAA--KALA--SALRPQPSLKELCLSLNETGRI-PRGLQ----- 71 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHH--HHHH--HHHhhCCCceEEeccccccCCc-chHHH-----
Confidence 5788888888 4456666778889999999998865311 0112 4566777889999988887631 11110
Q ss_pred ccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCC---CCeEecccCcccc----cCCccccCC-CC
Q 040301 103 FQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQ---LRGLSLKYNNLEG----SIPYDLCHL-KL 174 (524)
Q Consensus 103 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~---L~~L~L~~n~i~~----~~~~~~~~l-~~ 174 (524)
.++..+.++++|+.|++++|.+....+..+..+.+ |++|++++|++++ .+...+..+ ++
T Consensus 72 -------------~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~ 138 (319)
T cd00116 72 -------------SLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPA 138 (319)
T ss_pred -------------HHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCC
Confidence 12223333444444555444444333333322222 5555555554441 122233334 55
Q ss_pred CCEEEccCCcccc----cCCccccCCCCCCEEEccCCcCCCc----cChhccCCCCCCEEEcCCCcCccc----CCcCcc
Q 040301 175 MYGIRLTGNKLSG----HIPPCLASLTSLRELHLGSNKLTSS----IPSSLWSLEYILMINLSSNSLNDS----LPSNIQ 242 (524)
Q Consensus 175 L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~ 242 (524)
|+.|++++|.+++ ..+..+..+++|+.|++++|.+.+. ++..+...++|+.|++++|.+.+. +...+.
T Consensus 139 L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~ 218 (319)
T cd00116 139 LEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLA 218 (319)
T ss_pred ceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhc
Confidence 5555555555542 1223344555666666666666532 223344455677777777666432 233445
Q ss_pred CCCCCCEEEcCCCcCcccc-cccc-----ccCCCCEEEccCCcccC----CCcccccCCCCCCEEeCCCCcCCCC----C
Q 040301 243 TLKVLRVLDLSRNQLSGDI-STIG-----ALVDLETLSLASNQFQG----PIPESVGSLISLESLDLSGNNLSGK----I 308 (524)
Q Consensus 243 ~l~~L~~L~l~~n~l~~~~-~~~~-----~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~----~ 308 (524)
.+++|+.|++++|.+++.. ..+. ..+.|+.|++++|.++. .+...+..+++|+.+++++|.++.. .
T Consensus 219 ~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 298 (319)
T cd00116 219 SLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLL 298 (319)
T ss_pred ccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHH
Confidence 6677777777777776422 1111 23678888888887762 2334455667888888888888744 3
Q ss_pred cccccCC-CCCCeEEccCCcC
Q 040301 309 PKSLETL-SHLKQFNASHNRL 328 (524)
Q Consensus 309 ~~~~~~l-~~L~~l~l~~n~l 328 (524)
...+... +.++.+++.+|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 299 AESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhhcCCchhhcccCCCCC
Confidence 3344444 6788888887764
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=5.9e-21 Score=187.17 Aligned_cols=189 Identities=24% Similarity=0.268 Sum_probs=117.5
Q ss_pred CCCccEEEccCCccccc----CCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCCh
Q 040301 19 HQIYWVMDLSSNSFSGH----IPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPP 94 (524)
Q Consensus 19 ~~~l~~Ldls~n~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 94 (524)
..+|+.|++++|.+++. ++..+...++|++|+++++.+...+..-..++ ..+.++++|++|++++|.+....+.
T Consensus 22 l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~--~~l~~~~~L~~L~l~~~~~~~~~~~ 99 (319)
T cd00116 22 LLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLL--QGLTKGCGLQELDLSDNALGPDGCG 99 (319)
T ss_pred HhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHH--HHHHhcCceeEEEccCCCCChhHHH
Confidence 35799999999999643 56667778889999999998863211001111 4567788999999999999876666
Q ss_pred hHhcCccc---ccEEEeccCcccc----cCCccccCC-CCCCeEEcccCcCccc----CCccccCCCCCCeEecccCccc
Q 040301 95 VIGNFSAS---FQNFYAFNCKLKG----NIPQEIGNL-RGLTLLSLFNNDLNGT----ISPTMGRLKQLRGLSLKYNNLE 162 (524)
Q Consensus 95 ~~~~~~~~---L~~L~l~~n~l~~----~~~~~~~~l-~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~i~ 162 (524)
.+..+. + |++|++++|.+.+ .+...+..+ ++|+.|++++|.+++. .+..+..+++|++|++++|.++
T Consensus 100 ~~~~l~-~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 100 VLESLL-RSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIG 178 (319)
T ss_pred HHHHHh-ccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCc
Confidence 666655 4 8888888877762 233344555 6777777777777632 2334455566777777766665
Q ss_pred cc----CCccccCCCCCCEEEccCCccccc----CCccccCCCCCCEEEccCCcCC
Q 040301 163 GS----IPYDLCHLKLMYGIRLTGNKLSGH----IPPCLASLTSLRELHLGSNKLT 210 (524)
Q Consensus 163 ~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~ 210 (524)
+. ++..+...++|+.|++++|.+.+. +...+..+++|++|++++|.+.
T Consensus 179 ~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 179 DAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred hHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 31 222333445555566655554322 1222333444555555555444
No 21
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.75 E-value=3.6e-18 Score=167.38 Aligned_cols=104 Identities=36% Similarity=0.533 Sum_probs=94.3
Q ss_pred cccccchhhhhhhhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEE
Q 040301 420 TWRRTSYLDIQRATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSC 499 (524)
Q Consensus 420 ~~~~~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~ 499 (524)
..+.|++.++..||++|...+.||+|+||.||+|.+++|+.||||++.....+..++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 46789999999999999999999999999999999998899999988765432156699999999999999999999999
Q ss_pred EcCCc-ceEEEcccCCCCHHHHHHh
Q 040301 500 SNPDF-KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 500 ~~~~~-~~lv~e~~~~gsL~~~l~~ 523 (524)
.+.+. .+||||||++|+|.++|+.
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~ 165 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHG 165 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCC
Confidence 99984 9999999999999999853
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=4.4e-20 Score=152.41 Aligned_cols=164 Identities=29% Similarity=0.524 Sum_probs=103.9
Q ss_pred ccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCC
Q 040301 121 IGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLR 200 (524)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 200 (524)
+.++.+.+.|.|++|+++ ..|+.++.+.+|+.|++++|+|+ ..|..++.++.|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 345666777778888877 45556777778888888888877 66777777777777777777776 6777777777777
Q ss_pred EEEccCCcCCC-ccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEccCCc
Q 040301 201 ELHLGSNKLTS-SIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSLASNQ 279 (524)
Q Consensus 201 ~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~ 279 (524)
+||+++|.+.. .+|..|..+..|+.|+|+.|.+. .+|..++++. +|+.|.+.+|.
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt-----------------------~lqil~lrdnd 161 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLT-----------------------NLQILSLRDND 161 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhc-----------------------ceeEEeeccCc
Confidence 77777776652 34555555555555555555554 3444444444 44455555555
Q ss_pred ccCCCcccccCCCCCCEEeCCCCcCCCCCccccc
Q 040301 280 FQGPIPESVGSLISLESLDLSGNNLSGKIPKSLE 313 (524)
Q Consensus 280 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 313 (524)
+. ..|..++.+..|+.|++.+|+++ .+|..++
T Consensus 162 ll-~lpkeig~lt~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 162 LL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred hh-hCcHHHHHHHHHHHHhcccceee-ecChhhh
Confidence 44 45555556666666666666665 3444333
No 23
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.71 E-value=2.8e-17 Score=154.05 Aligned_cols=92 Identities=25% Similarity=0.370 Sum_probs=83.3
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeecc--chHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQ--LERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
...+|...+.||+|.||+||+|++ .++..||||.+... ..+..+....|+++|++++|||||++++++..++.+|+|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 456788889999999999999997 46788999999765 355667788999999999999999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
||||.||+|.+||++
T Consensus 88 MEyC~gGDLs~yi~~ 102 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRR 102 (429)
T ss_pred EEeCCCCCHHHHHHH
Confidence 999999999999986
No 24
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.70 E-value=1.4e-19 Score=149.47 Aligned_cols=163 Identities=29% Similarity=0.460 Sum_probs=116.0
Q ss_pred cccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccc
Q 040301 42 NLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEI 121 (524)
Q Consensus 42 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 121 (524)
++.+++.|.||+|+++..+ ..++.+.+|+.|++.+|++. .+|..+..++ +|+.|++.-|++. ..|..|
T Consensus 31 ~~s~ITrLtLSHNKl~~vp---------pnia~l~nlevln~~nnqie-~lp~~issl~-klr~lnvgmnrl~-~lprgf 98 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVP---------PNIAELKNLEVLNLSNNQIE-ELPTSISSLP-KLRILNVGMNRLN-ILPRGF 98 (264)
T ss_pred chhhhhhhhcccCceeecC---------CcHHHhhhhhhhhcccchhh-hcChhhhhch-hhhheecchhhhh-cCcccc
Confidence 4445555566666665443 45555566666666666665 4555555555 6666666666665 677788
Q ss_pred cCCCCCCeEEcccCcCcc-cCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCC
Q 040301 122 GNLRGLTLLSLFNNDLNG-TISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLR 200 (524)
Q Consensus 122 ~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 200 (524)
+.++.|+.|||++|++.. .+|+.|..++.|+.|+|++|.++ .+|..+.++++|+.|.+.+|.+- .+|..++.++.|+
T Consensus 99 gs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lr 176 (264)
T KOG0617|consen 99 GSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLR 176 (264)
T ss_pred CCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHH
Confidence 888888888888888763 46777888888888888888887 77888888888888888888876 6777888888888
Q ss_pred EEEccCCcCCCccChhccC
Q 040301 201 ELHLGSNKLTSSIPSSLWS 219 (524)
Q Consensus 201 ~L~l~~n~l~~~~~~~~~~ 219 (524)
.|++++|+++ .+|..++.
T Consensus 177 elhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 177 ELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred HHhcccceee-ecChhhhh
Confidence 8888888887 55554443
No 25
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.62 E-value=5.7e-16 Score=158.38 Aligned_cols=97 Identities=23% Similarity=0.345 Sum_probs=83.7
Q ss_pred hhhhhhhccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccch-HHHHHHHHHHHHHhcCCCCCccceeEEE
Q 040301 427 LDIQRATDEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVCHRNLIKILSSC 499 (524)
Q Consensus 427 ~~l~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~~~~ 499 (524)
.-.+....+....+.+|+|.||+||+|+. .+.+.||||.++.... +..++|.||++.+++++|||||+++|.|
T Consensus 479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 33344556677788999999999999994 2345699999987664 4788999999999999999999999999
Q ss_pred EcCCcceEEEcccCCCCHHHHHHh
Q 040301 500 SNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 500 ~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.++++.+||+|||..|||++||+-
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra 582 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRA 582 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHh
Confidence 999999999999999999999973
No 26
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.58 E-value=2.9e-15 Score=150.75 Aligned_cols=102 Identities=25% Similarity=0.346 Sum_probs=86.8
Q ss_pred cccchhhhhhhhcc---------ccccCcccCCCCceEEEEEeC----CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC
Q 040301 422 RRTSYLDIQRATDE---------FNECNLLGTGSFGSVYKGTIS----DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV 487 (524)
Q Consensus 422 ~~~~~~~l~~~~~~---------~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l 487 (524)
..++|+|--.|... ..+.++||.|.||.||+|+++ ....||||.++... ++++.+|+.|..||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 45666665544433 456789999999999999962 23569999998765 56788999999999999
Q ss_pred CCCCccceeEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 488 CHRNLIKILSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 488 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+||||+++.|+.....+..||+|||++|+|..|||+
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~ 723 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQ 723 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhh
Confidence 999999999999999999999999999999999986
No 27
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.54 E-value=5.6e-15 Score=143.85 Aligned_cols=97 Identities=21% Similarity=0.291 Sum_probs=84.3
Q ss_pred hhhhhhhhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 426 YLDIQRATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 426 ~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
...++...+.+...+.||+|.||.||.|.+.....||+|.++... -..++|.+|+.+|++++|++||+++|+|..++++
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi 276 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI 276 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence 344444555667778999999999999999777789999998753 2457899999999999999999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
|||||||+.|+|.+||++
T Consensus 277 yIVtE~m~~GsLl~yLr~ 294 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRT 294 (468)
T ss_pred EEEEEecccCcHHHHhhh
Confidence 999999999999999985
No 28
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=3.1e-14 Score=133.75 Aligned_cols=88 Identities=25% Similarity=0.291 Sum_probs=76.4
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch-H------HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE-R------AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-~------~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
+.|...+.+|+|+||.|-+|.- .+|+.||||++.+... . ......+|+++|++++|||||+++++|..+++.
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 4577889999999999999995 6899999999975431 1 122356999999999999999999999999999
Q ss_pred eEEEcccCCCCHHHHH
Q 040301 506 ALMWGRLLNISITIIR 521 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l 521 (524)
|||||||+||+|.+++
T Consensus 252 YmVlE~v~GGeLfd~v 267 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKV 267 (475)
T ss_pred EEEEEEecCccHHHHH
Confidence 9999999999999987
No 29
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.51 E-value=3.9e-14 Score=140.19 Aligned_cols=101 Identities=19% Similarity=0.254 Sum_probs=86.2
Q ss_pred ccchhhhhhhhccccccCcccCCCCceEEEEEeC--CC--CE-EEEEEeecc---chHHHHHHHHHHHHHhcCCCCCccc
Q 040301 423 RTSYLDIQRATDEFNECNLLGTGSFGSVYKGTIS--DW--TN-VAIKIFNLQ---LERAFRSFDSECEVLRNVCHRNLIK 494 (524)
Q Consensus 423 ~~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~~--~~--~~-vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~ 494 (524)
.+..+.|+..-++....+++|+|.||.||+|.+. ++ .. ||||..... ......+|.+|.++|+.++|||||+
T Consensus 146 PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr 225 (474)
T KOG0194|consen 146 PIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVR 225 (474)
T ss_pred cccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4455666666677777899999999999999963 23 23 899998752 2566789999999999999999999
Q ss_pred eeEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 495 ILSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 495 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+||++..++++++|||+|.||+|.++|++
T Consensus 226 ~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k 254 (474)
T KOG0194|consen 226 FYGVAVLEEPLMLVMELCNGGSLDDYLKK 254 (474)
T ss_pred EEEEEcCCCccEEEEEecCCCcHHHHHHh
Confidence 99999999999999999999999999986
No 30
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.50 E-value=9.1e-14 Score=131.86 Aligned_cols=88 Identities=23% Similarity=0.294 Sum_probs=75.1
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcC--CCCCccceeEEEEcCC----cc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNV--CHRNLIKILSSCSNPD----FK 505 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l--~H~niv~l~~~~~~~~----~~ 505 (524)
..++....+.||+|.||.||+|.| .|..||||++.... .+.+.+|-++.+.+ +|+||+.+++.-..+. ++
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhheeEEEEEecCccccceeeccc-cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 446678889999999999999998 57899999997544 35678899998864 9999999999877653 68
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
|||++|.|.|||+|||.+
T Consensus 285 wLvTdYHe~GSL~DyL~r 302 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR 302 (513)
T ss_pred EEeeecccCCcHHHHHhh
Confidence 999999999999999964
No 31
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.50 E-value=2.7e-14 Score=139.45 Aligned_cols=89 Identities=21% Similarity=0.302 Sum_probs=81.0
Q ss_pred cccccCcccCCCCceEEEEEeCCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 435 EFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
...+.++||+|.||+|..|....+..||||++++.. +...++|.+||++|.+++|||||+++|+|..++++++|+|||+
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 355688999999999999998778999999998765 4456899999999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.+|+.+
T Consensus 619 nGDLnqFl~a 628 (807)
T KOG1094|consen 619 NGDLNQFLSA 628 (807)
T ss_pred cCcHHHHHHh
Confidence 9999999853
No 32
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=7.6e-14 Score=137.68 Aligned_cols=90 Identities=17% Similarity=0.255 Sum_probs=82.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
..|...+.+|+|+|+.||.++. .+|..||+|++++.. ....+...+||++.+.++|||||+++++|++.+.+|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4699999999999999999996 889999999997643 456778999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
|+|++|+|.+++++
T Consensus 98 ELC~~~sL~el~Kr 111 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR 111 (592)
T ss_pred EecCCccHHHHHHh
Confidence 99999999999985
No 33
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.48 E-value=8.2e-14 Score=135.80 Aligned_cols=88 Identities=25% Similarity=0.455 Sum_probs=75.2
Q ss_pred ccccCcccCCCCceEEEEEeCCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-cceEEEccc
Q 040301 436 FNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD-FKALMWGRL 512 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~ 512 (524)
......+|+|+||+||+|.+.....||||++.... ....++|.+|+.+|++++|||||+++|+|.++. ..+||||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 34445699999999999999654449999997543 223679999999999999999999999999888 799999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 123 ~~GsL~~~l~~ 133 (362)
T KOG0192|consen 123 PGGSLSVLLHK 133 (362)
T ss_pred CCCcHHHHHhh
Confidence 99999999964
No 34
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.47 E-value=1.9e-13 Score=130.74 Aligned_cols=85 Identities=24% Similarity=0.313 Sum_probs=72.0
Q ss_pred cccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHh--cCCCCCccceeEEEEcCC----cceEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLR--NVCHRNLIKILSSCSNPD----FKALM 508 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~--~l~H~niv~l~~~~~~~~----~~~lv 508 (524)
..+....+|+|+||.||+|++.+ +.||||+++.. ..+.|..|-++.+ .++|+||++++++-.... +.+||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 45566789999999999999854 89999999764 4467888888866 568999999999876655 89999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
+||.++|||.+||+.
T Consensus 287 t~fh~kGsL~dyL~~ 301 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA 301 (534)
T ss_pred eeeccCCcHHHHHHh
Confidence 999999999999974
No 35
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.45 E-value=2.8e-13 Score=126.24 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=78.6
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-cceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD-FKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~ 511 (524)
+.+..+.||+|..|+||++.+ ++++.+|+|.+.... ....++..+|++++.+++||+||++||+|..+. .++|+|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 445568999999999999997 578899999995433 456788999999999999999999999999988 59999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
|++|||++++++
T Consensus 160 MDgGSLd~~~k~ 171 (364)
T KOG0581|consen 160 MDGGSLDDILKR 171 (364)
T ss_pred cCCCCHHHHHhh
Confidence 999999999875
No 36
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=1.5e-14 Score=129.32 Aligned_cols=91 Identities=21% Similarity=0.298 Sum_probs=78.7
Q ss_pred ccccccCcccCCCCceEEEEE-eCCCCEEEEEEeecc--chHHHHHHHHHHHHHhcCCCCCccceeE-EEEcCCc-ceEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGT-ISDWTNVAIKIFNLQ--LERAFRSFDSECEVLRNVCHRNLIKILS-SCSNPDF-KALM 508 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~-~~~~~~~-~~lv 508 (524)
.+|++.++||+|+||.||+++ ..+|..+|.|.++-. ..+..+++..|+.+|+.++|||||++++ .+.++.+ ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 468888999999999999999 478999999999732 2455778999999999999999999999 5655555 8999
Q ss_pred EcccCCCCHHHHHHhC
Q 040301 509 WGRLLNISITIIRRHL 524 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~~ 524 (524)
||||.+|+|.+.|+++
T Consensus 99 mE~c~~GDLsqmIk~~ 114 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHF 114 (375)
T ss_pred HHhhcccCHHHHHHHH
Confidence 9999999999999863
No 37
>PLN03150 hypothetical protein; Provisional
Probab=99.41 E-value=8.7e-13 Score=139.30 Aligned_cols=117 Identities=37% Similarity=0.619 Sum_probs=97.7
Q ss_pred CCCEEEcCCCcCcccc-ccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEcc
Q 040301 246 VLRVLDLSRNQLSGDI-STIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNAS 324 (524)
Q Consensus 246 ~L~~L~l~~n~l~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 324 (524)
.++.|+|++|.+.+.. ..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++++.+|+.+..+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 3678899999988655 678889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCccccCCC--CcCCCCCcccccCCCCCCCCCCCCCCCCC
Q 040301 325 HNRLEGKILVK--GSFKNFSAESFFGNYALCGLPKFRVPPCK 364 (524)
Q Consensus 325 ~n~l~~~~~~~--~~~~~~~~~~~~~n~~lc~~p~~~~~~c~ 364 (524)
+|.++|.+|.. ..+.....+++.+|..+|+.|. .+.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCc
Confidence 99999888753 2223445678889999999764 35674
No 38
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.41 E-value=6.1e-15 Score=143.71 Aligned_cols=174 Identities=29% Similarity=0.443 Sum_probs=116.2
Q ss_pred CCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEE
Q 040301 124 LRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELH 203 (524)
Q Consensus 124 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 203 (524)
+..-...|++.|++. ++|..+..+..|+.+.|..|.+. .+|..++.+..|..|+++.|++. .+|..+..++ |+.|.
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 444455677777776 56666666677777777777776 66777777777777777777766 5555555443 66777
Q ss_pred ccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEccCCcccCC
Q 040301 204 LGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSLASNQFQGP 283 (524)
Q Consensus 204 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~ 283 (524)
+++|+++ .+|..+...+.|..||.+.|.+. .+|..++.+.+|+.|.+..|++...+..++.+ .|..||++.|++. .
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis-~ 225 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKIS-Y 225 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCcee-e
Confidence 7777766 55666666666777777777665 35666666677777777777776666665544 3666777777766 5
Q ss_pred CcccccCCCCCCEEeCCCCcCC
Q 040301 284 IPESVGSLISLESLDLSGNNLS 305 (524)
Q Consensus 284 ~~~~~~~l~~L~~L~l~~N~l~ 305 (524)
+|-.|..|..|++|-|.+|.+.
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred cchhhhhhhhheeeeeccCCCC
Confidence 6666777777777777777766
No 39
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.40 E-value=1.8e-13 Score=134.53 Aligned_cols=97 Identities=20% Similarity=0.281 Sum_probs=86.1
Q ss_pred hhhhhhhhccccccCcccCCCCceEEEEEeCC-CCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc
Q 040301 426 YLDIQRATDEFNECNLLGTGSFGSVYKGTISD-WTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF 504 (524)
Q Consensus 426 ~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 504 (524)
++.|+-...++.+.+++|-|.||.||.|.|+. ...||||.++.... ...+|..|..+|+.++|||+|+++|+|..+..
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 35666666778888999999999999999854 56799999986543 46789999999999999999999999999999
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
+|||+|||.+|+|.||||+
T Consensus 338 FYIiTEfM~yGNLLdYLRe 356 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRE 356 (1157)
T ss_pred eEEEEecccCccHHHHHHH
Confidence 9999999999999999986
No 40
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.39 E-value=8.2e-13 Score=128.47 Aligned_cols=93 Identities=18% Similarity=0.251 Sum_probs=83.6
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
...++|+...+||+|+||.||.|+- .+|..+|+|++++.. ..+.+.+..|-.+|...++|.||+++..|++.+++|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 3567899999999999999999995 579999999998654 345677889999999999999999999999999999
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
|||||++||++..+|.+
T Consensus 218 LiMEylPGGD~mTLL~~ 234 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMR 234 (550)
T ss_pred EEEEecCCccHHHHHHh
Confidence 99999999999998864
No 41
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.39 E-value=5.3e-13 Score=134.70 Aligned_cols=196 Identities=31% Similarity=0.481 Sum_probs=145.8
Q ss_pred EEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcC-cccccEEEeccCcccccCCccccCCCC
Q 040301 48 SLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNF-SASFQNFYAFNCKLKGNIPQEIGNLRG 126 (524)
Q Consensus 48 ~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-~~~L~~L~l~~n~l~~~~~~~~~~l~~ 126 (524)
.|++..|.+.... ..+..++.++.|++.+|++.. ++.....+ . +|+.|++++|++. .+|..+..+++
T Consensus 97 ~l~~~~~~~~~~~---------~~~~~~~~l~~L~l~~n~i~~-i~~~~~~~~~-nL~~L~l~~N~i~-~l~~~~~~l~~ 164 (394)
T COG4886 97 SLDLNLNRLRSNI---------SELLELTNLTSLDLDNNNITD-IPPLIGLLKS-NLKELDLSDNKIE-SLPSPLRNLPN 164 (394)
T ss_pred eeeccccccccCc---------hhhhcccceeEEecCCccccc-Cccccccchh-hcccccccccchh-hhhhhhhcccc
Confidence 5777777763321 344555778888888888884 44444444 2 6888888888887 45566788888
Q ss_pred CCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 040301 127 LTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGS 206 (524)
Q Consensus 127 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 206 (524)
|+.|++++|++. ..|...+..+.|+.|++++|.++ .+|........|+.|.+++|.+. ..+..+.++.++..+.+.+
T Consensus 165 L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~ 241 (394)
T COG4886 165 LKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSN 241 (394)
T ss_pred ccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCC
Confidence 999999999888 44444447888889999999888 66666556666888899888543 4556677888888888888
Q ss_pred CcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCcccc
Q 040301 207 NKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDI 261 (524)
Q Consensus 207 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 261 (524)
|++. ..+..+..++.++.|++++|.++. ++. ++.+.+++.|++++|.+...+
T Consensus 242 n~~~-~~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~ 293 (394)
T COG4886 242 NKLE-DLPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNAL 293 (394)
T ss_pred ceee-eccchhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccc
Confidence 8876 346778888889999999999875 333 888889999999998887665
No 42
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.38 E-value=7.8e-13 Score=133.47 Aligned_cols=201 Identities=32% Similarity=0.517 Sum_probs=164.6
Q ss_pred CEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccccCCC-CCCeEEcccCcCcccCCccccCCCCCCeEecc
Q 040301 79 KALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLR-GLTLLSLFNNDLNGTISPTMGRLKQLRGLSLK 157 (524)
Q Consensus 79 ~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 157 (524)
..|++..|.+.... ..+..+. .+..|++.+|.++ .++.....+. +|+.|++++|++. ..|..+..+++|+.|+++
T Consensus 96 ~~l~~~~~~~~~~~-~~~~~~~-~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~ 171 (394)
T COG4886 96 PSLDLNLNRLRSNI-SELLELT-NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLS 171 (394)
T ss_pred ceeeccccccccCc-hhhhccc-ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccC
Confidence 36899999985333 3344444 7999999999998 5666667774 9999999999998 455678899999999999
Q ss_pred cCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccC
Q 040301 158 YNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSL 237 (524)
Q Consensus 158 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 237 (524)
+|+++ .+|......+.|+.|++++|++. .+|........|+.|.+++|.+. ..+..+..+.++..+.+.+|++.. +
T Consensus 172 ~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~ 247 (394)
T COG4886 172 FNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-L 247 (394)
T ss_pred Cchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-c
Confidence 99999 66666668899999999999998 56665555667999999999654 567778889999999999999873 4
Q ss_pred CcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEccCCcccCCCcccc
Q 040301 238 PSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSLASNQFQGPIPESV 288 (524)
Q Consensus 238 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 288 (524)
+..++.++++++|++++|.++.... +..+.+++.|++++|.+....+...
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred cchhccccccceecccccccccccc-ccccCccCEEeccCccccccchhhh
Confidence 7788899999999999999987766 8888999999999999986655543
No 43
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.38 E-value=7.3e-13 Score=123.48 Aligned_cols=92 Identities=20% Similarity=0.300 Sum_probs=82.7
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
..++|+..++||+|+||+|+.++. ++++.+|+|.+++.. ....+...+|..+|.+++||.||+++..|++++.+|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 457899999999999999999996 568999999997654 3456778899999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|+||+.||+|+.+|++
T Consensus 103 Vld~~~GGeLf~hL~~ 118 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQR 118 (357)
T ss_pred EEeccCCccHHHHHHh
Confidence 9999999999999863
No 44
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.36 E-value=3.9e-13 Score=125.90 Aligned_cols=89 Identities=19% Similarity=0.228 Sum_probs=79.9
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.|++.+.+|+|.||+|-+|.. ..|+.||||.+++.. +++.-...+||++|+.++||||+++|++|...+.+.||||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 478888999999999999995 679999999997654 4455567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|..+|.|.||+.+
T Consensus 134 YaS~GeLYDYiSe 146 (668)
T KOG0611|consen 134 YASGGELYDYISE 146 (668)
T ss_pred ecCCccHHHHHHH
Confidence 9999999999854
No 45
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36 E-value=8.9e-13 Score=127.19 Aligned_cols=88 Identities=23% Similarity=0.302 Sum_probs=74.5
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--CcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~l 507 (524)
.+.|+..++||+|.||.||+|+. .+|+.||+|++.-.. .+...-..|||.+|++++||||+++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 35688889999999999999995 789999999997544 33344567999999999999999999999876 68999
Q ss_pred EEcccCCCCHHHHH
Q 040301 508 MWGRLLNISITIIR 521 (524)
Q Consensus 508 v~e~~~~gsL~~~l 521 (524)
|+|||+. +|.-++
T Consensus 196 VFeYMdh-DL~GLl 208 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLL 208 (560)
T ss_pred EEecccc-hhhhhh
Confidence 9999996 877655
No 46
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.36 E-value=1.6e-12 Score=138.38 Aligned_cols=91 Identities=22% Similarity=0.368 Sum_probs=79.9
Q ss_pred hccccccCcccCCCCceEEEEEeC--CCC----EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS--DWT----NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
....+....||+|.||.||.|++. ++. .||||.+++.. .+...+|.+|..+|++++|||||+++|.|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 445667789999999999999962 333 49999997654 56788999999999999999999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
+|++|||++|+|..|||+
T Consensus 771 ~i~leyM~gGDL~sflr~ 788 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRE 788 (1025)
T ss_pred EEEehhcccCcHHHHHHh
Confidence 999999999999999986
No 47
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=5.3e-13 Score=116.87 Aligned_cols=90 Identities=19% Similarity=0.232 Sum_probs=80.4
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
-++|++.+.+|+|.||.||.|+. .++-.||+|++.+.. .+..+++.+|+++=+.++||||+++|+||.+....|++
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 45789999999999999999997 456779999996543 34467899999999999999999999999999999999
Q ss_pred EcccCCCCHHHHHH
Q 040301 509 WGRLLNISITIIRR 522 (524)
Q Consensus 509 ~e~~~~gsL~~~l~ 522 (524)
+||.++|++...|+
T Consensus 101 lEya~~gel~k~L~ 114 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQ 114 (281)
T ss_pred EEecCCchHHHHHH
Confidence 99999999999887
No 48
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.35 E-value=3.3e-14 Score=138.64 Aligned_cols=180 Identities=32% Similarity=0.486 Sum_probs=155.4
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcC
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNF 99 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 99 (524)
...+..|+++|++. ++|..+..+..|+.|.|..|.+..++ ..+.++..|++|||+.|++. .+|..+..+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~ip---------~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l 143 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRTIP---------EAICNLEALTFLDLSSNQLS-HLPDGLCDL 143 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccceecc---------hhhhhhhHHHHhhhccchhh-cCChhhhcC
Confidence 46678999999998 89999999999999999999998765 78889999999999999998 778888887
Q ss_pred cccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEE
Q 040301 100 SASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIR 179 (524)
Q Consensus 100 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 179 (524)
-|+.|-+++|+++ .+|..++.++.|..||.+.|++. .+|..++.+.+|+.|.+..|++. .+|..+..++ |..||
T Consensus 144 --pLkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lD 217 (722)
T KOG0532|consen 144 --PLKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLD 217 (722)
T ss_pred --cceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeee
Confidence 5899999999998 68888888899999999999998 67788999999999999999998 6777777554 78899
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcCCCccChhcc
Q 040301 180 LTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLW 218 (524)
Q Consensus 180 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 218 (524)
++.|++. .+|-.|.+|..|++|-|.+|.+. ..|..+.
T Consensus 218 fScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 218 FSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred cccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 9999998 78888999999999999999987 4444443
No 49
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.34 E-value=1.3e-12 Score=116.17 Aligned_cols=89 Identities=22% Similarity=0.385 Sum_probs=77.7
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
..|...+.+|+|.||.||+|+. .+|+.||||+++... ++......|||+.|++++|+||+.++++|-..+.+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4577888999999999999995 679999999997544 2334567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
||+. +|+..||+
T Consensus 82 fm~t-dLe~vIkd 93 (318)
T KOG0659|consen 82 FMPT-DLEVVIKD 93 (318)
T ss_pred eccc-cHHHHhcc
Confidence 9996 99988875
No 50
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.32 E-value=4.7e-12 Score=127.34 Aligned_cols=96 Identities=19% Similarity=0.295 Sum_probs=80.9
Q ss_pred hhhhhhccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCC-CCCccceeEEE
Q 040301 428 DIQRATDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVC-HRNLIKILSSC 499 (524)
Q Consensus 428 ~l~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~ 499 (524)
.+....++|.+.+.||+|+||.||+|+.. .+..||||++.... ....+.|.+|+++++++. |||||+++++|
T Consensus 31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~ 110 (400)
T cd05105 31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC 110 (400)
T ss_pred ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence 34445678899999999999999999852 13469999997543 344568999999999996 99999999999
Q ss_pred EcCCcceEEEcccCCCCHHHHHHh
Q 040301 500 SNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 500 ~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.+.+..|+|||||++|+|.++|++
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~ 134 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHK 134 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHH
Confidence 999999999999999999999864
No 51
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.31 E-value=1.4e-12 Score=127.19 Aligned_cols=89 Identities=25% Similarity=0.442 Sum_probs=78.5
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
++|-..+.||+|+||.||||+. .+.+.||+|.+.+.. ++..+...+|++++++++|||||.+++.|.+..++|+|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4677778999999999999995 467889999997544 4567789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
||.| +|+.+|.+
T Consensus 82 ~a~g-~L~~il~~ 93 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ 93 (808)
T ss_pred hhhh-hHHHHHHh
Confidence 9986 99998853
No 52
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.31 E-value=1.4e-12 Score=118.01 Aligned_cols=87 Identities=20% Similarity=0.210 Sum_probs=74.1
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
+.|+....+|+|+||+||+|+. .+|+.||||++-... ....+-..|||++|+.++|||+|.++++|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 4688888999999999999996 579999999995433 3345667899999999999999999999999999999999
Q ss_pred ccCCCCHHHHH
Q 040301 511 RLLNISITIIR 521 (524)
Q Consensus 511 ~~~~gsL~~~l 521 (524)
||+. ++.+-|
T Consensus 82 ~~dh-TvL~eL 91 (396)
T KOG0593|consen 82 YCDH-TVLHEL 91 (396)
T ss_pred ecch-HHHHHH
Confidence 9986 444444
No 53
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.30 E-value=3.7e-12 Score=125.58 Aligned_cols=97 Identities=26% Similarity=0.453 Sum_probs=85.2
Q ss_pred cchhhhhhhhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 040301 424 TSYLDIQRATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSN 501 (524)
Q Consensus 424 ~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~ 501 (524)
.+.++|.+..+.+.....||+|+||+||+|.+.. .||||.++... ....+.|++||.++++.+|.||+-+.|||..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 3457777788888889999999999999999854 68999997654 4578899999999999999999999999998
Q ss_pred CCcceEEEcccCCCCHHHHHHh
Q 040301 502 PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
++. .||+.+|+|-+|+.+|+-
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv 480 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHV 480 (678)
T ss_pred Cce-eeeehhccCchhhhhccc
Confidence 877 999999999999999863
No 54
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.30 E-value=1.9e-13 Score=126.03 Aligned_cols=255 Identities=23% Similarity=0.298 Sum_probs=133.4
Q ss_pred CCCCccEEEccCCccccc----CCcccccccCCCEEEccccccCCCCCCccccC-----ccccCCCCCCCCEEEccCCCC
Q 040301 18 PHQIYWVMDLSSNSFSGH----IPNTFGNLRHLSSLLLTWNNLTTESSLADQWS-----FLSALTNCRHLKALSLGSNPL 88 (524)
Q Consensus 18 ~~~~l~~Ldls~n~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-----~~~~~~~l~~L~~L~l~~n~l 88 (524)
+..+++.|+||+|.|... +...+.+.++|+..++|.-..... ...+| +-..+.+.++|++||||+|-+
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~---~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRL---KDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCc---HHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 457899999999999743 344556677888888876322211 11111 113455667899999999988
Q ss_pred CCCCChhHhcCc---ccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCccccc-
Q 040301 89 GGILPPVIGNFS---ASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGS- 164 (524)
Q Consensus 89 ~~~~~~~~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~- 164 (524)
....+..|..+. ..|++|.|.+|.+.-.-...++. -|..|. .+. -..+-++|+.+...+|++...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~g 173 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGG 173 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeecccccccc
Confidence 765554444431 14555555555443111111110 111111 111 122345677777777777632
Q ss_pred ---CCccccCCCCCCEEEccCCccccc----CCccccCCCCCCEEEccCCcCCCc----cChhccCCCCCCEEEcCCCcC
Q 040301 165 ---IPYDLCHLKLMYGIRLTGNKLSGH----IPPCLASLTSLRELHLGSNKLTSS----IPSSLWSLEYILMINLSSNSL 233 (524)
Q Consensus 165 ---~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l 233 (524)
+...|...+.|+.+.++.|.|... +...+..+++|++|||++|.++.. +...+..++.|+.|++++|.+
T Consensus 174 a~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll 253 (382)
T KOG1909|consen 174 ATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLL 253 (382)
T ss_pred HHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccccc
Confidence 233455566777777777765421 123455566666666666666532 122333444444444444444
Q ss_pred cccCCcCccCCCCCCEEEcCCCcCccccccc-cccCCCCEEEccCCcccCC----CcccccCCCCCCEEeCCCCcCC
Q 040301 234 NDSLPSNIQTLKVLRVLDLSRNQLSGDISTI-GALVDLETLSLASNQFQGP----IPESVGSLISLESLDLSGNNLS 305 (524)
Q Consensus 234 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 305 (524)
...-...| ...+ ...|.|+.|.+.+|.++.. +...+...|.|+.|+|++|.+.
T Consensus 254 ~~~Ga~a~-------------------~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 254 ENEGAIAF-------------------VDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccccHHHH-------------------HHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 32111100 0111 2345666666666666532 1222345677777788888773
No 55
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.30 E-value=6.1e-12 Score=113.65 Aligned_cols=90 Identities=22% Similarity=0.254 Sum_probs=81.2
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.+|.|+||.|..++. .+|..+|+|+++... .++.+...+|..+|+.+.||.++++++.|.+.+.+||||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 5688889999999999999996 568899999997654 345667889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||.+||.|+.++|+
T Consensus 124 eyv~GGElFS~Lrk 137 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK 137 (355)
T ss_pred eccCCccHHHHHHh
Confidence 99999999999987
No 56
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.29 E-value=8.8e-12 Score=118.67 Aligned_cols=95 Identities=18% Similarity=0.204 Sum_probs=84.1
Q ss_pred hhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
+....++|+....||.|..++||+|+. +.+..||||++.-.. ........+|+..|+.++||||++++.+|..+.++|
T Consensus 21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW 100 (516)
T KOG0582|consen 21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW 100 (516)
T ss_pred CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE
Confidence 334557899999999999999999995 778999999997544 334578899999999999999999999999999999
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+||.||.+||+.+.|+.
T Consensus 101 vVmpfMa~GS~ldIik~ 117 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKT 117 (516)
T ss_pred EeehhhcCCcHHHHHHH
Confidence 99999999999999975
No 57
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.29 E-value=6.3e-12 Score=125.85 Aligned_cols=94 Identities=20% Similarity=0.256 Sum_probs=79.9
Q ss_pred hhhhccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEc
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSN 501 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 501 (524)
....++|+..+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+.+++.+ +||||++++++|..
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~ 110 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV 110 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc
Confidence 33455788999999999999999973 235679999996543 33456789999999999 89999999999999
Q ss_pred CCcceEEEcccCCCCHHHHHHh
Q 040301 502 PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
++..++|||||++|+|.+++++
T Consensus 111 ~~~~~lv~E~~~~g~L~~~l~~ 132 (375)
T cd05104 111 GGPTLVITEYCCYGDLLNFLRR 132 (375)
T ss_pred CCcceeeehhccCCcHHHHHHh
Confidence 9999999999999999999964
No 58
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.28 E-value=1.3e-11 Score=124.01 Aligned_cols=89 Identities=16% Similarity=0.182 Sum_probs=78.7
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577889999999999999996 568899999997543 2345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 82 ~~~gg~L~~~l~~ 94 (381)
T cd05626 82 YIPGGDMMSLLIR 94 (381)
T ss_pred cCCCCcHHHHHHh
Confidence 9999999998854
No 59
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.28 E-value=1.3e-11 Score=123.42 Aligned_cols=90 Identities=17% Similarity=0.229 Sum_probs=79.2
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||+|+. .+++.||||++.... ......+.+|+++++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 3688899999999999999996 468899999997542 234556889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
|||++|+|.+++++
T Consensus 81 E~~~~g~L~~~l~~ 94 (364)
T cd05599 81 EYLPGGDMMTLLMK 94 (364)
T ss_pred CCCCCcHHHHHHHH
Confidence 99999999999854
No 60
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.27 E-value=1.9e-11 Score=122.76 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=78.7
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|...+.||+|+||.||++.. .+++.||||.+.... ....+.+.+|+++++.++||||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688889999999999999986 578899999986532 233567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 E~~~gg~L~~~l~~ 94 (377)
T cd05629 81 EFLPGGDLMTMLIK 94 (377)
T ss_pred eCCCCCcHHHHHHh
Confidence 99999999998853
No 61
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.27 E-value=6.5e-13 Score=125.91 Aligned_cols=206 Identities=20% Similarity=0.211 Sum_probs=103.3
Q ss_pred CCCCCCEEEccCCCCCCCCC-hhHhcCcccccEEEeccCcccc--cCCccccCCCCCCeEEcccCcCcccCCcc-ccCCC
Q 040301 74 NCRHLKALSLGSNPLGGILP-PVIGNFSASFQNFYAFNCKLKG--NIPQEIGNLRGLTLLSLFNNDLNGTISPT-MGRLK 149 (524)
Q Consensus 74 ~l~~L~~L~l~~n~l~~~~~-~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~ 149 (524)
++.+|+.+.|.++.+....- .....++ +++.|+|+.|-+.. .+-.....|++|+.|+++.|++....... -..++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~-~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILP-NVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCC-cceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 44555555555555542211 2333343 56666666655543 12233455666777777766665222111 12355
Q ss_pred CCCeEecccCcccc-cCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccC--hhccCCCCCCEE
Q 040301 150 QLRGLSLKYNNLEG-SIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIP--SSLWSLEYILMI 226 (524)
Q Consensus 150 ~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L 226 (524)
.|+.|.|+.|+++- .+-..+..+|+|+.|+|.+|............+..|+.|||++|.+.. .+ .....++.|..|
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccchhhh
Confidence 66666666666652 122334456666666666664222222233445566666666666542 22 334556666666
Q ss_pred EcCCCcCccc-CCcC-----ccCCCCCCEEEcCCCcCcccc--ccccccCCCCEEEccCCccc
Q 040301 227 NLSSNSLNDS-LPSN-----IQTLKVLRVLDLSRNQLSGDI--STIGALVDLETLSLASNQFQ 281 (524)
Q Consensus 227 ~L~~n~l~~~-~~~~-----~~~l~~L~~L~l~~n~l~~~~--~~~~~l~~L~~L~L~~N~l~ 281 (524)
+++.+.+.+. .|+. ...+++|++|++..|++.... ..+..+++|+.|.+..|.+.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 6666665532 1111 234456666666666654333 33344445555555555444
No 62
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.26 E-value=2e-11 Score=116.36 Aligned_cols=91 Identities=20% Similarity=0.296 Sum_probs=78.5
Q ss_pred hccccccCcccCCCCceEEEEEeC----CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS----DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
..+|+..+.||+|+||.||+|++. .+..||+|.++... ......|.+|+..+++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356888899999999999999852 35679999997543 3345678999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 84 v~e~~~~~~L~~~l~~ 99 (266)
T cd05064 84 VTEYMSNGALDSFLRK 99 (266)
T ss_pred EEEeCCCCcHHHHHHh
Confidence 9999999999999864
No 63
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.26 E-value=1.3e-11 Score=124.00 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=80.9
Q ss_pred hhhhhccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCC-CCCccceeEEEE
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVC-HRNLIKILSSCS 500 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~ 500 (524)
+....++|...+.||+|+||.||+|.+. .+..||+|+++... ....+.+.+|++++.++. |||||+++++|.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 4556667888899999999999999852 23579999997543 333457889999999997 999999999999
Q ss_pred cCCcceEEEcccCCCCHHHHHHh
Q 040301 501 NPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 501 ~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
..+..++|||||++|+|.+++++
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~ 134 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHR 134 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHh
Confidence 99999999999999999999964
No 64
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=7.1e-13 Score=125.65 Aligned_cols=207 Identities=26% Similarity=0.293 Sum_probs=132.7
Q ss_pred cCCCCCCeEEcccCcCcccCC--ccccCCCCCCeEecccCccccc--CCccccCCCCCCEEEccCCcccccCCcc-ccCC
Q 040301 122 GNLRGLTLLSLFNNDLNGTIS--PTMGRLKQLRGLSLKYNNLEGS--IPYDLCHLKLMYGIRLTGNKLSGHIPPC-LASL 196 (524)
Q Consensus 122 ~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l 196 (524)
+++.+|+...|.++.+. ..+ .....|++++.|||+.|-+..- +......+|+|+.|+++.|++.....+. -..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 46777888888777765 222 3556678888888888877632 2234556788888888888875322221 1246
Q ss_pred CCCCEEEccCCcCCC-ccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCcccc--ccccccCCCCEE
Q 040301 197 TSLRELHLGSNKLTS-SIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDI--STIGALVDLETL 273 (524)
Q Consensus 197 ~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~l~~L~~L 273 (524)
++|+.|.++.|.++. .+......+|+|+.|+|.+|..-.........+..|+.|||++|.+...+ ...+.++.|..|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 788888888888873 23345567888888888888532223333445678888888888887665 566778888888
Q ss_pred EccCCcccCCC-ccc-----ccCCCCCCEEeCCCCcCCCC-CcccccCCCCCCeEEccCCcCc
Q 040301 274 SLASNQFQGPI-PES-----VGSLISLESLDLSGNNLSGK-IPKSLETLSHLKQFNASHNRLE 329 (524)
Q Consensus 274 ~L~~N~l~~~~-~~~-----~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~n~l~ 329 (524)
+++.+.+.... |+. ...+++|+.|+++.|++... .-..+..+++|+.+.+..|.+.
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 88888777532 222 24467777777777777521 1123344455555555555543
No 65
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.26 E-value=2.4e-11 Score=118.18 Aligned_cols=91 Identities=22% Similarity=0.277 Sum_probs=77.7
Q ss_pred hccccccCcccCCCCceEEEEEeCC-----------------CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISD-----------------WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIK 494 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~ 494 (524)
.++|...+.||+|+||.||+|...+ +..||+|.+.... .....+|.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3568888999999999999997522 3369999987643 334567999999999999999999
Q ss_pred eeEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 495 ILSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 495 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+++++.+.+..++||||+++|+|.+++..
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSS 112 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHh
Confidence 99999999999999999999999998853
No 66
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.26 E-value=1.5e-11 Score=121.09 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=81.6
Q ss_pred hhccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccch---HHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCcce
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE---RAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~ 506 (524)
....|+..+.+|+|.||.||+++.+ +|+.+|+|.+.+... .....+.+|+.+|+++. |||||.+++.|.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3456888899999999999999974 599999999976543 23468899999999998 999999999999999999
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+|||+|+||+|++.|.+
T Consensus 113 lvmEL~~GGeLfd~i~~ 129 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVK 129 (382)
T ss_pred EEEEecCCchHHHHHHH
Confidence 99999999999999865
No 67
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.26 E-value=9.9e-12 Score=122.83 Aligned_cols=93 Identities=22% Similarity=0.355 Sum_probs=77.6
Q ss_pred hhhccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcC
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNP 502 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~ 502 (524)
.+.++|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++..+ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 4557799999999999999999974 234679999997543 33456789999999999 899999999998764
Q ss_pred -CcceEEEcccCCCCHHHHHHh
Q 040301 503 -DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 -~~~~lv~e~~~~gsL~~~l~~ 523 (524)
...++||||+++|+|.+++++
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~ 105 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRA 105 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHh
Confidence 468999999999999999864
No 68
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.25 E-value=1.4e-11 Score=116.97 Aligned_cols=93 Identities=27% Similarity=0.404 Sum_probs=84.2
Q ss_pred hhhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.+..+|+..+.||+|+||.||+|...++..+|+|.+........+++.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 45678999999999999999999987788999999987665556789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 83 ~~~~~~L~~~~~~ 95 (261)
T cd05148 83 LMEKGSLLAFLRS 95 (261)
T ss_pred ecccCCHHHHHhc
Confidence 9999999999864
No 69
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.25 E-value=2.1e-11 Score=119.91 Aligned_cols=90 Identities=19% Similarity=0.246 Sum_probs=79.4
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
.+|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 5688889999999999999997 468899999997543 234567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 98 e~~~~~~L~~~l~~ 111 (329)
T PTZ00263 98 EFVVGGELFTHLRK 111 (329)
T ss_pred cCCCCChHHHHHHH
Confidence 99999999998864
No 70
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=1.6e-11 Score=120.89 Aligned_cols=93 Identities=22% Similarity=0.241 Sum_probs=80.6
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc----h-HHHHHHHHHHHHHhcCC-CCCccceeEEEEcCC
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL----E-RAFRSFDSECEVLRNVC-HRNLIKILSSCSNPD 503 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~----~-~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~ 503 (524)
...+.|...+.+|+|.||+|+.|.. .+++.||+|.+++.. . ...+...+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4456899999999999999999985 578999999776531 1 23456678999999999 999999999999999
Q ss_pred cceEEEcccCCCCHHHHHHh
Q 040301 504 FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~~ 523 (524)
.+++|||||.||+|++++.+
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~ 113 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN 113 (370)
T ss_pred eEEEEEEecCCccHHHHHHH
Confidence 99999999999999999865
No 71
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.25 E-value=3.2e-11 Score=118.84 Aligned_cols=91 Identities=16% Similarity=0.202 Sum_probs=80.3
Q ss_pred hccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.++|+..+.||+|+||.||++... ++..+|+|.+.... ......+.+|+++++.++||||++++++|.+++..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999974 67889999887543 3345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 84 ~~~~~~L~~~l~~ 96 (333)
T cd06650 84 HMDGGSLDQVLKK 96 (333)
T ss_pred cCCCCcHHHHHHH
Confidence 9999999999864
No 72
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.25 E-value=1.5e-11 Score=118.85 Aligned_cols=90 Identities=19% Similarity=0.255 Sum_probs=78.8
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888899999999999999964 68899999996532 234567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 e~~~~~~L~~~~~~ 94 (291)
T cd05612 81 EYVPGGELFSYLRN 94 (291)
T ss_pred eCCCCCCHHHHHHH
Confidence 99999999999864
No 73
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.25 E-value=2.8e-11 Score=119.34 Aligned_cols=90 Identities=18% Similarity=0.255 Sum_probs=79.1
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++..++||||+++++++..++..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888899999999999999974 58899999997543 234567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 e~~~g~~L~~~l~~ 94 (333)
T cd05600 81 EYVPGGDFRTLLNN 94 (333)
T ss_pred eCCCCCCHHHHHHH
Confidence 99999999999853
No 74
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.24 E-value=2.6e-11 Score=121.64 Aligned_cols=89 Identities=15% Similarity=0.139 Sum_probs=78.5
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..|+|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 688899999999999999996 468899999996532 2234668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
||++|+|.+++++
T Consensus 82 ~~~~g~L~~~i~~ 94 (376)
T cd05598 82 YIPGGDMMSLLIR 94 (376)
T ss_pred CCCCCcHHHHHHh
Confidence 9999999999864
No 75
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.24 E-value=2.9e-11 Score=121.57 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=78.5
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 478889999999999999996 567889999997543 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
||++|+|.+++++
T Consensus 82 ~~~gg~L~~~l~~ 94 (382)
T cd05625 82 YIPGGDMMSLLIR 94 (382)
T ss_pred CCCCCcHHHHHHh
Confidence 9999999998854
No 76
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.24 E-value=4.1e-11 Score=118.01 Aligned_cols=91 Identities=16% Similarity=0.168 Sum_probs=80.4
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.++|+..+.||+|+||.||+++. .++..+|+|.+.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 36789999999999999999996 467889999987543 3345679999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 84 ~~~~~~L~~~l~~ 96 (331)
T cd06649 84 HMDGGSLDQVLKE 96 (331)
T ss_pred cCCCCcHHHHHHH
Confidence 9999999999864
No 77
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.23 E-value=3.6e-11 Score=119.98 Aligned_cols=90 Identities=17% Similarity=0.174 Sum_probs=78.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++.+++||||+++++++.+....|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 3688899999999999999986 468899999997543 223456889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
|||++|+|.+++++
T Consensus 81 E~~~gg~L~~~l~~ 94 (363)
T cd05628 81 EFLPGGDMMTLLMK 94 (363)
T ss_pred cCCCCCcHHHHHHh
Confidence 99999999999864
No 78
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.23 E-value=1.7e-12 Score=117.18 Aligned_cols=136 Identities=27% Similarity=0.379 Sum_probs=104.6
Q ss_pred ccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCC
Q 040301 167 YDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKV 246 (524)
Q Consensus 167 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 246 (524)
..+..|+.|+.++|++|.|+ .+.++..-+|.++.|+++.|.+. .+ +.+..+++|+.|||++|.++ .+.+|=..+-+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 34556777888888888887 56677777888888888888887 33 33788888999999988887 35566667788
Q ss_pred CCEEEcCCCcCccccccccccCCCCEEEccCCcccCC-CcccccCCCCCCEEeCCCCcCCCC
Q 040301 247 LRVLDLSRNQLSGDISTIGALVDLETLSLASNQFQGP-IPESVGSLISLESLDLSGNNLSGK 307 (524)
Q Consensus 247 L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~ 307 (524)
+++|.++.|.+... +.+..+-+|..|++++|+|... ....++++|.|+.+.|.+|.+.+.
T Consensus 354 IKtL~La~N~iE~L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 354 IKTLKLAQNKIETL-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred EeeeehhhhhHhhh-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 88999999887632 3455666788899999988752 235688999999999999999843
No 79
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.23 E-value=3.4e-11 Score=118.86 Aligned_cols=91 Identities=25% Similarity=0.346 Sum_probs=78.1
Q ss_pred hccccccCcccCCCCceEEEEEeC-C-CCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-D-WTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.++|+..+.||+|+||.||+|... + +..||+|.+.... ....+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 456888899999999999999853 2 3679999996532 2345678899999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 109 v~Ey~~~g~L~~~i~~ 124 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR 124 (340)
T ss_pred EEeCCCCCcHHHHHHH
Confidence 9999999999999864
No 80
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.23 E-value=3.2e-11 Score=114.09 Aligned_cols=89 Identities=24% Similarity=0.290 Sum_probs=78.3
Q ss_pred ccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.+|+..+.||+|+||.||++.+.++..+|+|.+..... ..++|.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 45778889999999999999987777899998864332 34678899999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.+++++
T Consensus 83 ~~~L~~~~~~ 92 (256)
T cd05114 83 NGCLLNYLRQ 92 (256)
T ss_pred CCcHHHHHHh
Confidence 9999999863
No 81
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.23 E-value=4.1e-11 Score=114.21 Aligned_cols=95 Identities=25% Similarity=0.325 Sum_probs=83.4
Q ss_pred hhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
++.+++++.....+|+|+||.||+|.. .++..||+|.+........+.+.+|++++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 445666677778999999999999996 4678899999977665567789999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|+||+++++|.+++++
T Consensus 83 v~e~~~~~~L~~~l~~ 98 (268)
T cd06624 83 FMEQVPGGSLSALLRS 98 (268)
T ss_pred EEecCCCCCHHHHHHH
Confidence 9999999999999863
No 82
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.22 E-value=3.4e-11 Score=120.36 Aligned_cols=94 Identities=12% Similarity=0.185 Sum_probs=81.0
Q ss_pred hhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
....++|+..+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 34567899999999999999999996 468899999997532 22345578999999999999999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
|+|||||++|+|.+++++
T Consensus 119 ~lv~Ey~~gg~L~~~l~~ 136 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSN 136 (370)
T ss_pred EEEEcCCCCCcHHHHHHh
Confidence 999999999999998864
No 83
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.22 E-value=2.5e-12 Score=116.01 Aligned_cols=87 Identities=22% Similarity=0.194 Sum_probs=78.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
-|.++.++|+|+||.||+|.. ..|+.+|+|.++.. .+.++...||.+|..++.|++|++||.|.....+|||||||-
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 477788999999999999996 57899999998754 367889999999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
.||..|.+|-
T Consensus 112 AGSiSDI~R~ 121 (502)
T KOG0574|consen 112 AGSISDIMRA 121 (502)
T ss_pred CCcHHHHHHH
Confidence 9999999874
No 84
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.22 E-value=3.9e-11 Score=119.84 Aligned_cols=96 Identities=11% Similarity=0.195 Sum_probs=82.1
Q ss_pred hhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 040301 428 DIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD 503 (524)
Q Consensus 428 ~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 503 (524)
.+....++|+..+.||+|+||.||++.. .+++.+|+|.+.... ....+.+.+|+.+++.++||||+++++++.+++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 3444567899999999999999999997 467889999996532 223456889999999999999999999999999
Q ss_pred cceEEEcccCCCCHHHHHHh
Q 040301 504 FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~~ 523 (524)
..|+|||||++|+|.+++++
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~ 136 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSN 136 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHh
Confidence 99999999999999998864
No 85
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.22 E-value=3.4e-11 Score=119.36 Aligned_cols=93 Identities=17% Similarity=0.187 Sum_probs=82.5
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.....|.+...||+|.|+.|..|+. .++..||+|.+++.. ....+.+.+|+++|..++|||||+++.+...+..+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 4556789999999999999999996 578999999998754 3334568899999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+.+|.+++|+.+
T Consensus 133 V~eya~~ge~~~yl~~ 148 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVK 148 (596)
T ss_pred EEEeccCchhHHHHHh
Confidence 9999999999999964
No 86
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.22 E-value=2e-12 Score=116.80 Aligned_cols=204 Identities=23% Similarity=0.268 Sum_probs=139.5
Q ss_pred ccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccC-CcccccCCccccCCCCC
Q 040301 121 IGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTG-NKLSGHIPPCLASLTSL 199 (524)
Q Consensus 121 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L 199 (524)
+.-+.+|+.+.++.+.-..+.. ....-|.|+.+...+..++. .| .+.....+...+-.. ....|.....+.....|
T Consensus 210 l~~f~~l~~~~~s~~~~~~i~~-~~~~kptl~t~~v~~s~~~~-~~-~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~L 286 (490)
T KOG1259|consen 210 LNAFRNLKTLKFSALSTENIVD-IELLKPTLQTICVHNTTIQD-VP-SLLPETILADPSGSEPSTSNGSALVSADTWQEL 286 (490)
T ss_pred hHHhhhhheeeeeccchhheec-eeecCchhheeeeecccccc-cc-cccchhhhcCccCCCCCccCCceEEecchHhhh
Confidence 3445566666666654332221 11223566777665554441 11 111122222221111 11222222334445678
Q ss_pred CEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEccCCc
Q 040301 200 RELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSLASNQ 279 (524)
Q Consensus 200 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~ 279 (524)
+.+|+++|.|+ .+.+++.-+|.++.|++++|.+... +.+..+++|+.||+++|.++....+-..+-+.++|.|++|.
T Consensus 287 telDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~ 363 (490)
T KOG1259|consen 287 TELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNK 363 (490)
T ss_pred hhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhh
Confidence 99999999998 6788899999999999999999743 34888999999999999998777666777889999999998
Q ss_pred ccCCCcccccCCCCCCEEeCCCCcCCCCC-cccccCCCCCCeEEccCCcCcccc
Q 040301 280 FQGPIPESVGSLISLESLDLSGNNLSGKI-PKSLETLSHLKQFNASHNRLEGKI 332 (524)
Q Consensus 280 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~n~l~~~~ 332 (524)
+... ..+..+-+|..||+++|+|.... -..++++|.|+.+.+.+||+.+..
T Consensus 364 iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 364 IETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred Hhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 8742 45778889999999999997322 246889999999999999998643
No 87
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.22 E-value=1e-11 Score=107.77 Aligned_cols=102 Identities=20% Similarity=0.205 Sum_probs=30.8
Q ss_pred CCCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccc-cCCCCCCeEEcccCcCcccC-CccccCCCCCC
Q 040301 75 CRHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEI-GNLRGLTLLSLFNNDLNGTI-SPTMGRLKQLR 152 (524)
Q Consensus 75 l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~ 152 (524)
+.+|+.|||++|.|.... .+..+. +|++|++++|.++.. ...+ ..+++|+.|++++|++.... -..+..+++|+
T Consensus 41 l~~L~~L~Ls~N~I~~l~--~l~~L~-~L~~L~L~~N~I~~i-~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~ 116 (175)
T PF14580_consen 41 LDKLEVLDLSNNQITKLE--GLPGLP-RLKTLDLSNNRISSI-SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLR 116 (175)
T ss_dssp -TT--EEE-TTS--S--T--T----T-T--EEE--SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--
T ss_pred hcCCCEEECCCCCCcccc--CccChh-hhhhcccCCCCCCcc-ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcc
Confidence 344444444444444221 122333 444444444444422 1122 23555555555555554321 13444556666
Q ss_pred eEecccCcccccC---CccccCCCCCCEEEc
Q 040301 153 GLSLKYNNLEGSI---PYDLCHLKLMYGIRL 180 (524)
Q Consensus 153 ~L~L~~n~i~~~~---~~~~~~l~~L~~L~l 180 (524)
.|++.+|.++..- ...+..+|+|+.||-
T Consensus 117 ~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 117 VLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred eeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 6666666665321 123455666666654
No 88
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.21 E-value=2.7e-11 Score=121.20 Aligned_cols=96 Identities=20% Similarity=0.306 Sum_probs=81.0
Q ss_pred hhhhhhccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEE
Q 040301 428 DIQRATDEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSC 499 (524)
Q Consensus 428 ~l~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~ 499 (524)
.+....++|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+++++.+ +|+|||+++++|
T Consensus 32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 3445566899999999999999999884 223579999997543 33456788999999999 899999999999
Q ss_pred EcCCcceEEEcccCCCCHHHHHHh
Q 040301 500 SNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 500 ~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
...+..++|||||++|+|.+++++
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~ 135 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRK 135 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHh
Confidence 999999999999999999999864
No 89
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=3.5e-12 Score=122.29 Aligned_cols=92 Identities=23% Similarity=0.254 Sum_probs=78.4
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch-HHHHHHHHHHHHHhcCC-CCCccceeEEEEcCC-cceE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVC-HRNLIKILSSCSNPD-FKAL 507 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~-~~~l 507 (524)
..+.|...+.+|.|.||.||+|+- .++..||||++++... .....=.||+..|++++ |||||++.+.+.+.+ .+|+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 456788999999999999999994 6788999999976543 22233469999999998 999999999999988 8999
Q ss_pred EEcccCCCCHHHHHHhC
Q 040301 508 MWGRLLNISITIIRRHL 524 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~~ 524 (524)
|||||+. +|.++|+++
T Consensus 88 VfE~Md~-NLYqLmK~R 103 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR 103 (538)
T ss_pred eHHhhhh-hHHHHHhhc
Confidence 9999985 999999864
No 90
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.20 E-value=1e-11 Score=107.64 Aligned_cols=105 Identities=28% Similarity=0.341 Sum_probs=23.7
Q ss_pred CccEEEccCCcccccCCcccc-cccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcC
Q 040301 21 IYWVMDLSSNSFSGHIPNTFG-NLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNF 99 (524)
Q Consensus 21 ~l~~Ldls~n~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 99 (524)
.++.|+|++|+|+ .+ +.++ .+.+|+.|+|++|+|+.+ ..+..++.|++|++++|.|+...+.....+
T Consensus 20 ~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~~l----------~~l~~L~~L~~L~L~~N~I~~i~~~l~~~l 87 (175)
T PF14580_consen 20 KLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQITKL----------EGLPGLPRLKTLDLSNNRISSISEGLDKNL 87 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S------------TT----TT--EEE--SS---S-CHHHHHH-
T ss_pred ccccccccccccc-cc-cchhhhhcCCCEEECCCCCCccc----------cCccChhhhhhcccCCCCCCccccchHHhC
Confidence 3455555555555 22 1233 344555555555555544 233344555555555555553222111223
Q ss_pred cccccEEEeccCccccc-CCccccCCCCCCeEEcccCcCc
Q 040301 100 SASFQNFYAFNCKLKGN-IPQEIGNLRGLTLLSLFNNDLN 138 (524)
Q Consensus 100 ~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~ 138 (524)
+ +|++|++++|++... .-..++.+++|+.|++.+|.+.
T Consensus 88 p-~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 88 P-NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp T-T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred C-cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 3 555555555555421 1123344555555555555554
No 91
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.20 E-value=8.6e-11 Score=114.49 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=78.4
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+|+..+.||+|+||.||++.. .++..+|+|.+.... .....++.+|++++++++||||++++++|.+++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 688889999999999999996 467889999886543 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 82 ~~~~L~~~l~~ 92 (308)
T cd06615 82 DGGSLDQVLKK 92 (308)
T ss_pred CCCcHHHHHHh
Confidence 99999999864
No 92
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.20 E-value=4.3e-11 Score=113.38 Aligned_cols=91 Identities=24% Similarity=0.326 Sum_probs=77.7
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC--cceEEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD--FKALMW 509 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 509 (524)
..++...+.+|+|.||.||.+.. ++|...|||.+........+...+|+++|++++|||||+++|.....+ .+++.|
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 34577788999999999999997 458999999997654333667889999999999999999999865555 699999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|||.+++++
T Consensus 96 Ey~~~GsL~~~~~~ 109 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKR 109 (313)
T ss_pred eccCCCcHHHHHHH
Confidence 99999999999975
No 93
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.20 E-value=6.9e-11 Score=116.35 Aligned_cols=90 Identities=20% Similarity=0.230 Sum_probs=78.6
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++..++|+||+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 3688899999999999999996 468899999997532 233456889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 e~~~g~~L~~~l~~ 94 (331)
T cd05597 81 DYYVGGDLLTLLSK 94 (331)
T ss_pred ecCCCCcHHHHHHH
Confidence 99999999999864
No 94
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.20 E-value=3.4e-11 Score=113.71 Aligned_cols=91 Identities=19% Similarity=0.277 Sum_probs=78.3
Q ss_pred hccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
-++|+..+.+|.|..|.||.+... ++..+|+|++++.. .+...+...|-+||+.++||.++.+|+.+.++...|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 346777889999999999999975 35789999998654 23345567788999999999999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
||||+||+|+...++
T Consensus 156 meyCpGGdL~~Lrqk 170 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQK 170 (459)
T ss_pred EecCCCccHHHHHhh
Confidence 999999999998865
No 95
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.19 E-value=6.6e-11 Score=118.29 Aligned_cols=98 Identities=11% Similarity=0.180 Sum_probs=84.2
Q ss_pred hhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 040301 426 YLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSN 501 (524)
Q Consensus 426 ~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~ 501 (524)
..++....++|+..+.||+|+||.||++.. .+++.+|+|.+.... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 455566678999999999999999999997 467889999996432 2334567899999999999999999999999
Q ss_pred CCcceEEEcccCCCCHHHHHHh
Q 040301 502 PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
++..++|||||++|+|.+++++
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~ 136 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN 136 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh
Confidence 9999999999999999998864
No 96
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.19 E-value=6e-11 Score=112.61 Aligned_cols=91 Identities=18% Similarity=0.318 Sum_probs=80.7
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..++|+..+.+|+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 3467889999999999999999987778899999865432 357889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 83 ~~~~~L~~~l~~ 94 (261)
T cd05072 83 MAKGSLLDFLKS 94 (261)
T ss_pred CCCCcHHHHHHH
Confidence 999999999863
No 97
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.19 E-value=1.5e-12 Score=120.26 Aligned_cols=244 Identities=22% Similarity=0.270 Sum_probs=152.9
Q ss_pred CCCCCCCEEEccCCCCCCC----CChhHhcCcccccEEEeccCcc---cccCC-------ccccCCCCCCeEEcccCcCc
Q 040301 73 TNCRHLKALSLGSNPLGGI----LPPVIGNFSASFQNFYAFNCKL---KGNIP-------QEIGNLRGLTLLSLFNNDLN 138 (524)
Q Consensus 73 ~~l~~L~~L~l~~n~l~~~----~~~~~~~~~~~L~~L~l~~n~l---~~~~~-------~~~~~l~~L~~L~l~~n~l~ 138 (524)
..+..++.|+|++|.+... +...+...+ +|+..++++-.. ...+| +.+...++|++|+||.|.+.
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~-~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVLASKK-ELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHHhhcc-cceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 3455666666666666533 233344444 555555554311 11222 23345567888888888776
Q ss_pred ccCCcc----ccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCc--
Q 040301 139 GTISPT----MGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSS-- 212 (524)
Q Consensus 139 ~~~~~~----~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 212 (524)
..-+.. +..+..|++|+|.+|.+.-.--..++. .|..|. .+. ....-+.|+++...+|++...
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga 174 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGGA 174 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccccH
Confidence 443333 345677777777777776211111110 011111 111 122335788888888887633
Q ss_pred --cChhccCCCCCCEEEcCCCcCccc----CCcCccCCCCCCEEEcCCCcCcccc-----ccccccCCCCEEEccCCccc
Q 040301 213 --IPSSLWSLEYILMINLSSNSLNDS----LPSNIQTLKVLRVLDLSRNQLSGDI-----STIGALVDLETLSLASNQFQ 281 (524)
Q Consensus 213 --~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~-----~~~~~l~~L~~L~L~~N~l~ 281 (524)
+...|...+.|+.+.++.|.|... +...+..+++|+.||+..|.++... ..++.+++|+.|++++|.+.
T Consensus 175 ~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 175 TALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred HHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccc
Confidence 234566778888888888887531 2234677899999999999886432 56778889999999999888
Q ss_pred CCCcccc-----cCCCCCCEEeCCCCcCCCC----CcccccCCCCCCeEEccCCcC
Q 040301 282 GPIPESV-----GSLISLESLDLSGNNLSGK----IPKSLETLSHLKQFNASHNRL 328 (524)
Q Consensus 282 ~~~~~~~-----~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~n~l 328 (524)
..-...| ...|+|+.|.+.+|.++.. +...+...+.|..|++++|.+
T Consensus 255 ~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 255 NEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 6443333 3478999999999999743 223455688999999999998
No 98
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.19 E-value=8.8e-11 Score=111.87 Aligned_cols=91 Identities=19% Similarity=0.233 Sum_probs=80.0
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..+|+..+.+|+|+||.||+|+. .+++.+|+|.+..........+.+|+.++++++||||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35789999999999999999996 56888999999755444456688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 88 ~~~~~L~~~~~~ 99 (267)
T cd06646 88 CGGGSLQDIYHV 99 (267)
T ss_pred CCCCcHHHHHHh
Confidence 999999998853
No 99
>PHA02988 hypothetical protein; Provisional
Probab=99.19 E-value=6.1e-11 Score=114.00 Aligned_cols=83 Identities=18% Similarity=0.184 Sum_probs=71.5
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeeccch---HHHHHHHHHHHHHhcCCCCCccceeEEEEc----CCcceEEEccc
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQLE---RAFRSFDSECEVLRNVCHRNLIKILSSCSN----PDFKALMWGRL 512 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~~ 512 (524)
..+|+|+++.||+|.+ +|+.||||.++.... ...+.|.+|+.++++++|||||+++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5789999999999998 678999999975432 224678899999999999999999999977 35689999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 105 ~~g~L~~~l~~ 115 (283)
T PHA02988 105 TRGYLREVLDK 115 (283)
T ss_pred CCCcHHHHHhh
Confidence 99999999864
No 100
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.19 E-value=7e-11 Score=113.76 Aligned_cols=88 Identities=17% Similarity=0.185 Sum_probs=76.2
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.|+..+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 377788999999999999996 468899999997543 2234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|+++|+|.++++
T Consensus 81 ~~~~~~L~~~~~ 92 (285)
T cd05605 81 LMNGGDLKFHIY 92 (285)
T ss_pred ccCCCcHHHHHH
Confidence 999999998874
No 101
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.18 E-value=8.8e-11 Score=115.62 Aligned_cols=90 Identities=19% Similarity=0.225 Sum_probs=78.3
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++...+|++|+++++++.+++..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688889999999999999996 467889999997532 223456888999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 Ey~~gg~L~~~l~~ 94 (331)
T cd05624 81 DYYVGGDLLTLLSK 94 (331)
T ss_pred eCCCCCcHHHHHHH
Confidence 99999999999864
No 102
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.18 E-value=8.4e-11 Score=112.87 Aligned_cols=92 Identities=21% Similarity=0.253 Sum_probs=82.4
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
..++|++.+.+|.|+||.||++.. .++..+|+|.+........+.|.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 356789999999999999999997 4678899999976655566789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 83 ~~~~~~L~~~~~~ 95 (280)
T cd06611 83 FCDGGALDSIMLE 95 (280)
T ss_pred ccCCCcHHHHHHH
Confidence 9999999998864
No 103
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.18 E-value=3.6e-11 Score=113.98 Aligned_cols=85 Identities=26% Similarity=0.361 Sum_probs=71.7
Q ss_pred cCcccCCCCceEEEEEeC-----CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 439 CNLLGTGSFGSVYKGTIS-----DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.+.||.|.||.||+|.+. .+..|+||.++... ....++|.+|++.+++++||||++++|+|...+..++|||||
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 468999999999999975 24679999996543 345788999999999999999999999999888899999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.++|++
T Consensus 84 ~~g~L~~~L~~ 94 (259)
T PF07714_consen 84 PGGSLDDYLKS 94 (259)
T ss_dssp TTEBHHHHHHH
T ss_pred ccccccccccc
Confidence 99999999975
No 104
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.18 E-value=2.2e-11 Score=111.85 Aligned_cols=92 Identities=18% Similarity=0.252 Sum_probs=75.1
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch--HHHHHHHHHHHHHhcCCCCCccceeEEEEc--CCcc
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE--RAFRSFDSECEVLRNVCHRNLIKILSSCSN--PDFK 505 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~ 505 (524)
...++|+..+.|++|.||.||+|+. ++++.||+|+++.... +-.=-..|||.+|.+++|||||.+..+..- -+.+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 4556799999999999999999996 5678899999975442 111234689999999999999999998864 3579
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
|||||||+. +|...|..
T Consensus 153 y~VMe~~Eh-DLksl~d~ 169 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMET 169 (419)
T ss_pred eeeHHHHHh-hHHHHHHh
Confidence 999999996 88887754
No 105
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=1.6e-11 Score=120.47 Aligned_cols=92 Identities=23% Similarity=0.275 Sum_probs=80.9
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
....|....+||+|..|.||.|.. .+++.||||++........+-..+|+.+|+..+|+|||+++..|...+++|+|||
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 345678888999999999999994 6788899999987654456678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
||+||+|.|.+.+
T Consensus 351 ym~ggsLTDvVt~ 363 (550)
T KOG0578|consen 351 YMEGGSLTDVVTK 363 (550)
T ss_pred ecCCCchhhhhhc
Confidence 9999999988754
No 106
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.17 E-value=9.4e-11 Score=116.90 Aligned_cols=90 Identities=18% Similarity=0.196 Sum_probs=78.6
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++..++||+|+++++++.+++..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688889999999999999996 468899999997533 233567888999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
|||++|+|.+++++
T Consensus 81 E~~~gg~L~~~l~~ 94 (360)
T cd05627 81 EFLPGGDMMTLLMK 94 (360)
T ss_pred eCCCCccHHHHHHh
Confidence 99999999999864
No 107
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.17 E-value=9.2e-11 Score=113.12 Aligned_cols=94 Identities=22% Similarity=0.304 Sum_probs=79.6
Q ss_pred hhhhccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP 502 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~ 502 (524)
+...++|+..+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.++++++||||+++++++.+.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 345678999999999999999998742 24579999886443 23345688999999999999999999999999
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+..++||||+++|+|.+++++
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~ 102 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRS 102 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHH
Confidence 999999999999999999964
No 108
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.17 E-value=1.7e-11 Score=124.65 Aligned_cols=87 Identities=25% Similarity=0.326 Sum_probs=74.4
Q ss_pred ccccCcccCCCCceEEEEEe-CCCC----EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWT----NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
...+++||+|+||+||+|.+ +.|+ +||+|.+.... .+...++..|+-+|.+++|||+++++|+|.... ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34567999999999999996 5553 58999886533 456788999999999999999999999998766 88999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
+||+.|+|.||+|.
T Consensus 777 q~mP~G~LlDyvr~ 790 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVRE 790 (1177)
T ss_pred HhcccchHHHHHHH
Confidence 99999999999974
No 109
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.17 E-value=4.7e-11 Score=117.96 Aligned_cols=91 Identities=22% Similarity=0.315 Sum_probs=75.5
Q ss_pred hhccccccCcccCCCCceEEEEEeC---CCC--EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS---DWT--NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~---~~~--~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
..+..+..++||.|.||.||+|.+. .|. .||||..+... ....+.|.+|..+|+.++|||||+++|.|. +.+.
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-e~P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-EQPM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-ccce
Confidence 3344556788999999999999972 333 38889886533 445789999999999999999999999997 4579
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
|||||.++.|.|..||++
T Consensus 466 WivmEL~~~GELr~yLq~ 483 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQ 483 (974)
T ss_pred eEEEecccchhHHHHHHh
Confidence 999999999999999974
No 110
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.17 E-value=1e-10 Score=112.65 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=75.9
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|++|+++++++.+++..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67778999999999999996 578999999987543 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
|++|+|.+++.
T Consensus 82 ~~~g~L~~~~~ 92 (285)
T cd05631 82 MNGGDLKFHIY 92 (285)
T ss_pred cCCCcHHHHHH
Confidence 99999988774
No 111
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.17 E-value=1.4e-10 Score=110.41 Aligned_cols=91 Identities=20% Similarity=0.290 Sum_probs=78.6
Q ss_pred hccccccCcccCCCCceEEEEEeC----CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS----DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.++|+..+.||+|+||.||+|... +...+|||.+.... ....++|.+|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 357889999999999999999963 23579999986543 3446689999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 83 v~e~~~~~~L~~~~~~ 98 (266)
T cd05033 83 ITEYMENGSLDKFLRE 98 (266)
T ss_pred EEEcCCCCCHHHHHHh
Confidence 9999999999999853
No 112
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.16 E-value=1.2e-10 Score=114.72 Aligned_cols=90 Identities=16% Similarity=0.180 Sum_probs=78.9
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|...+.||+|+||.||++.. .+++.||+|.++... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688889999999999999996 468899999997543 234567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 e~~~~~~L~~~l~~ 94 (330)
T cd05601 81 EYQPGGDLLSLLNR 94 (330)
T ss_pred CCCCCCCHHHHHHH
Confidence 99999999999864
No 113
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.16 E-value=1.6e-10 Score=113.36 Aligned_cols=84 Identities=20% Similarity=0.185 Sum_probs=73.1
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 515 (524)
+.||+|+||.||++.. .+|+.||+|.+.... ......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3689999999999996 568999999997542 234556788999999999999999999999999999999999999
Q ss_pred CHHHHHHh
Q 040301 516 SITIIRRH 523 (524)
Q Consensus 516 sL~~~l~~ 523 (524)
+|.+++++
T Consensus 81 ~L~~~l~~ 88 (323)
T cd05595 81 ELFFHLSR 88 (323)
T ss_pred cHHHHHHH
Confidence 99988753
No 114
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.16 E-value=9.1e-11 Score=111.36 Aligned_cols=91 Identities=20% Similarity=0.293 Sum_probs=80.1
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..++|+..+.+|+|+||.||+|...+++.||+|.++.... ..+++.+|++++++++||||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 3456888899999999999999987777899999875432 356789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 83 ~~~~~L~~~~~~ 94 (261)
T cd05068 83 MKYGSLLEYLQG 94 (261)
T ss_pred ccCCcHHHHHhc
Confidence 999999999864
No 115
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.16 E-value=1e-10 Score=110.63 Aligned_cols=89 Identities=22% Similarity=0.291 Sum_probs=78.1
Q ss_pred ccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
++|+..+.+|+|+||.||.|...++..+|+|.+..... ...+|.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 46788889999999999999986666799999875432 34678999999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.+++++
T Consensus 83 ~~~l~~~i~~ 92 (256)
T cd05113 83 NGCLLNYLRE 92 (256)
T ss_pred CCcHHHHHHh
Confidence 9999999864
No 116
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.16 E-value=1.8e-10 Score=113.04 Aligned_cols=84 Identities=21% Similarity=0.188 Sum_probs=73.2
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 515 (524)
+.||+|+||.||++.. .+|+.||+|.+.... ......+.+|++++++++||||+++++++..++..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999996 578899999997543 233456789999999999999999999999999999999999999
Q ss_pred CHHHHHHh
Q 040301 516 SITIIRRH 523 (524)
Q Consensus 516 sL~~~l~~ 523 (524)
+|.+++.+
T Consensus 81 ~L~~~l~~ 88 (323)
T cd05571 81 ELFFHLSR 88 (323)
T ss_pred cHHHHHHH
Confidence 99988853
No 117
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.16 E-value=1.5e-10 Score=110.22 Aligned_cols=90 Identities=23% Similarity=0.314 Sum_probs=77.4
Q ss_pred ccccccCcccCCCCceEEEEEeC-C---CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-D---WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
++|+..+.+|+|+||.||+|... + +..+|+|.+.... ....+.|.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888899999999999999852 2 3369999986543 33456899999999999999999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|||+++|+|.+++++
T Consensus 84 ~e~~~~~~L~~~~~~ 98 (267)
T cd05066 84 TEYMENGSLDAFLRK 98 (267)
T ss_pred EEcCCCCCHHHHHHh
Confidence 999999999999864
No 118
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.15 E-value=3.4e-11 Score=117.44 Aligned_cols=94 Identities=17% Similarity=0.276 Sum_probs=81.4
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcc
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 505 (524)
....+|...+.+|+|+|++|++|+. .+++.||||++.+.. ....+-..+|-.+|.++ .||.|++|+..|+++..+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 3456899999999999999999995 578999999997654 12234467889999999 899999999999999999
Q ss_pred eEEEcccCCCCHHHHHHhC
Q 040301 506 ALMWGRLLNISITIIRRHL 524 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~~ 524 (524)
|.|+||+++|+|.++|++.
T Consensus 150 YFvLe~A~nGdll~~i~K~ 168 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKY 168 (604)
T ss_pred EEEEEecCCCcHHHHHHHh
Confidence 9999999999999999874
No 119
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.15 E-value=1.1e-10 Score=111.74 Aligned_cols=83 Identities=16% Similarity=0.232 Sum_probs=70.8
Q ss_pred cccCCCCceEEEEEeCC-------------------------CCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccce
Q 040301 441 LLGTGSFGSVYKGTISD-------------------------WTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKI 495 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l 495 (524)
+||+|+||.||+|.... ...||+|.+.........+|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 68999999999997411 13488998876555556788999999999999999999
Q ss_pred eEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 496 LSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 496 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+++|..+...++||||+++|+|.+++++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 109 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK 109 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence 9999999999999999999999998853
No 120
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.15 E-value=1.2e-10 Score=111.58 Aligned_cols=93 Identities=25% Similarity=0.311 Sum_probs=79.7
Q ss_pred hhhccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD 503 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 503 (524)
.++++|+..+.+|+|+||.||+|... .+..+|+|.+.... .....+|.+|+.+++.++||||+++++++..+.
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45678999999999999999998742 24679999986433 334567899999999999999999999999999
Q ss_pred cceEEEcccCCCCHHHHHHh
Q 040301 504 FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~~ 523 (524)
..++||||+++|+|.+++++
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~ 102 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRS 102 (277)
T ss_pred CeEEEEecCCCCCHHHHHHH
Confidence 99999999999999999864
No 121
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.15 E-value=1.9e-10 Score=109.35 Aligned_cols=89 Identities=24% Similarity=0.477 Sum_probs=78.0
Q ss_pred cccccCcccCCCCceEEEEEeCCCCEEEEEEeeccc------hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQL------ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
+|...+.||+|+||.||+|...+++.+|+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 467788999999999999998788999999986432 22345688999999999999999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|||+++|+|.+++++
T Consensus 81 ~e~~~~~~L~~~l~~ 95 (265)
T cd06631 81 MEFVPGGSISSILNR 95 (265)
T ss_pred EecCCCCcHHHHHHh
Confidence 999999999999864
No 122
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.15 E-value=4.8e-11 Score=116.17 Aligned_cols=91 Identities=21% Similarity=0.230 Sum_probs=78.7
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc-ceEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF-KALM 508 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~-~~lv 508 (524)
.++|...+++|+|+||.++.++. .++..+++|.+.-.. ....+...+|+.+++++.|||||.+++.+..++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 46788999999999999998885 356789999996443 3345577899999999999999999999998888 9999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|+||+||++.+.|++
T Consensus 83 m~Y~eGg~l~~~i~~ 97 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKE 97 (426)
T ss_pred EeecCCCCHHHHHHH
Confidence 999999999999864
No 123
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.15 E-value=1.7e-10 Score=112.53 Aligned_cols=82 Identities=18% Similarity=0.133 Sum_probs=71.8
Q ss_pred ccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 442 LGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 442 ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999996 467889999997532 23456788999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
.+++++
T Consensus 81 ~~~l~~ 86 (312)
T cd05585 81 FHHLQR 86 (312)
T ss_pred HHHHHh
Confidence 998853
No 124
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.15 E-value=1.4e-10 Score=111.52 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=79.3
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|+..+.||+|+||+||++.. .+++.+|+|.+.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 5688889999999999999996 468889999886543 34467889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 85 ~~~~~L~~~~~~ 96 (284)
T cd06620 85 MDCGSLDRIYKK 96 (284)
T ss_pred CCCCCHHHHHHh
Confidence 999999998764
No 125
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=1.7e-11 Score=120.29 Aligned_cols=86 Identities=24% Similarity=0.271 Sum_probs=74.6
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
-|+..+.||.|+||.||-|+. .+...||||++.... ...++++..||++|.+++|||+|.+.|||..+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 366778899999999999995 567889999997544 3457889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHH
Q 040301 511 RLLNISITIIR 521 (524)
Q Consensus 511 ~~~~gsL~~~l 521 (524)
||-| |-.|.+
T Consensus 107 YClG-SAsDll 116 (948)
T KOG0577|consen 107 YCLG-SASDLL 116 (948)
T ss_pred HHhc-cHHHHH
Confidence 9984 766665
No 126
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.15 E-value=1.2e-10 Score=111.73 Aligned_cols=91 Identities=26% Similarity=0.408 Sum_probs=79.0
Q ss_pred hccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccchH-HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQLER-AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
.++|...+.+|+|+||.||+|... +++.+|||.+...... ..+.|.+|++++++++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 356888899999999999999853 2467999999754433 467899999999999999999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++|+|.++++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~ 101 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRS 101 (280)
T ss_pred EEEEecCCCCCHHHHHHh
Confidence 999999999999999863
No 127
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.14 E-value=1.7e-10 Score=113.64 Aligned_cols=90 Identities=18% Similarity=0.208 Sum_probs=77.9
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||++... +++.+|+|.+.... ....+.+.+|+.++..++|++|+++++++.+++..|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888899999999999999974 57789999996532 223455889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 ey~~~g~L~~~l~~ 94 (332)
T cd05623 81 DYYVGGDLLTLLSK 94 (332)
T ss_pred eccCCCcHHHHHHH
Confidence 99999999999964
No 128
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.14 E-value=1.8e-10 Score=123.60 Aligned_cols=89 Identities=19% Similarity=0.291 Sum_probs=79.0
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||+|.. .+++.||+|++.... ....++|.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5688899999999999999996 468899999996532 234567999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHH
Q 040301 510 GRLLNISITIIRR 522 (524)
Q Consensus 510 e~~~~gsL~~~l~ 522 (524)
||++||+|.++++
T Consensus 82 EY~eGGSL~~lL~ 94 (932)
T PRK13184 82 PYIEGYTLKSLLK 94 (932)
T ss_pred EcCCCCCHHHHHH
Confidence 9999999999885
No 129
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.14 E-value=2.3e-10 Score=110.06 Aligned_cols=90 Identities=24% Similarity=0.303 Sum_probs=77.3
Q ss_pred ccccccCcccCCCCceEEEEEe-----CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--Ccce
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-----SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKA 506 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~ 506 (524)
.+|+..+.+|+|+||.||++.+ .++..||+|.+........+.|.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999984 25778999999766655677899999999999999999999987543 4689
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+||||+++|+|.+++++
T Consensus 84 lv~e~~~~~~L~~~l~~ 100 (284)
T cd05081 84 LVMEYLPYGSLRDYLQK 100 (284)
T ss_pred EEEEecCCCCHHHHHHh
Confidence 99999999999999853
No 130
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.14 E-value=1e-10 Score=116.19 Aligned_cols=90 Identities=16% Similarity=0.222 Sum_probs=79.3
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999974 68899999997543 234567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++.+
T Consensus 81 e~~~~~~L~~~l~~ 94 (350)
T cd05573 81 EYMPGGDLMNLLIR 94 (350)
T ss_pred cCCCCCCHHHHHHH
Confidence 99999999999864
No 131
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.13 E-value=3.7e-11 Score=120.22 Aligned_cols=89 Identities=24% Similarity=0.280 Sum_probs=76.5
Q ss_pred ccccccCcccCCCCceEEEEEe--CCCC--EEEEEEeeccchH-HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI--SDWT--NVAIKIFNLQLER-AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~--~~~~--~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
+.....+.||+|.||.|++|.| ..|+ .||||.+...... ...+|.+|+.+|.+++|||++++||...+ ....||
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 3445567999999999999997 3454 4899999765532 56789999999999999999999999987 789999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
||.++.|||.+-|++
T Consensus 189 ~ELaplGSLldrLrk 203 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRK 203 (1039)
T ss_pred hhhcccchHHHHHhh
Confidence 999999999999976
No 132
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.13 E-value=1.4e-10 Score=115.36 Aligned_cols=87 Identities=23% Similarity=0.237 Sum_probs=75.5
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|+..+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 4566778999999999999996 468899999996543 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHH
Q 040301 512 LLNISITII 520 (524)
Q Consensus 512 ~~~gsL~~~ 520 (524)
+++|+|.+.
T Consensus 154 ~~~~~L~~~ 162 (353)
T PLN00034 154 MDGGSLEGT 162 (353)
T ss_pred CCCCccccc
Confidence 999998653
No 133
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.13 E-value=2.4e-10 Score=111.84 Aligned_cols=84 Identities=20% Similarity=0.184 Sum_probs=72.3
Q ss_pred CcccCCCCceEEEEEe----CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 440 NLLGTGSFGSVYKGTI----SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
+.||+|+||.||++.. .+|+.+|+|++.... ......+.+|++++++++||||+++++++.+++..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5789999999999874 357899999997543 2234567889999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.+++++
T Consensus 82 ~~~L~~~l~~ 91 (318)
T cd05582 82 GGDLFTRLSK 91 (318)
T ss_pred CCcHHHHHHH
Confidence 9999998853
No 134
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.13 E-value=1.9e-10 Score=109.18 Aligned_cols=91 Identities=21% Similarity=0.338 Sum_probs=80.2
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..++|.+.+.||+|+||.||+|...+++.+|||.+..... ..+++.+|+.++++++|+||+++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 4567889999999999999999987778899999875432 346789999999999999999999999998999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 83 ~~~~~L~~~i~~ 94 (261)
T cd05034 83 MSKGSLLDFLKS 94 (261)
T ss_pred cCCCCHHHHHhc
Confidence 999999999853
No 135
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.13 E-value=1.3e-10 Score=111.56 Aligned_cols=87 Identities=20% Similarity=0.275 Sum_probs=73.0
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch--------------HHHHHHHHHHHHHhcCCCCCcccee
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE--------------RAFRSFDSECEVLRNVCHRNLIKIL 496 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--------------~~~~~~~~Ei~~l~~l~H~niv~l~ 496 (524)
.-..|+....||+|.||.|-+|.. .+++.||||++.+... ...++..+||.+|+++.|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 346799999999999999999995 5789999999965321 0135789999999999999999999
Q ss_pred EEEEcC--CcceEEEcccCCCCHH
Q 040301 497 SSCSNP--DFKALMWGRLLNISIT 518 (524)
Q Consensus 497 ~~~~~~--~~~~lv~e~~~~gsL~ 518 (524)
++..+. +.+|||+|||..|.+.
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~ 198 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVK 198 (576)
T ss_pred EeecCcccCceEEEEEeccCCccc
Confidence 998764 5799999999999753
No 136
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.13 E-value=1.8e-10 Score=109.64 Aligned_cols=91 Identities=21% Similarity=0.278 Sum_probs=80.0
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
.++|+..+.||+|+||.||+|+. .+++.+|+|.++.........+.+|+.+++.++||||+++++++..++..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 35788889999999999999996 46888999999765544556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 88 ~~~~~L~~~~~~ 99 (267)
T cd06645 88 CGGGSLQDIYHV 99 (267)
T ss_pred cCCCcHHHHHHh
Confidence 999999998853
No 137
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.13 E-value=2e-10 Score=110.73 Aligned_cols=92 Identities=21% Similarity=0.400 Sum_probs=79.6
Q ss_pred hhccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF 504 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 504 (524)
..++|+..+.+|+|+||.||++... ++..+|+|.+.... ....++|.+|+.++++++||||+++++++..++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3467889999999999999999853 45779999987543 3345679999999999999999999999999999
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
.++||||+++|+|.+++++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~ 101 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRH 101 (288)
T ss_pred cEEEEecCCCCCHHHHHHH
Confidence 9999999999999999863
No 138
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.13 E-value=2.6e-10 Score=108.80 Aligned_cols=83 Identities=22% Similarity=0.265 Sum_probs=71.1
Q ss_pred cccCCCCceEEEEEeC---CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCC
Q 040301 441 LLGTGSFGSVYKGTIS---DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNIS 516 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 516 (524)
.||+|+||.||+|... .+..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 6899999999999853 34568999886543 2344578899999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 040301 517 ITIIRRH 523 (524)
Q Consensus 517 L~~~l~~ 523 (524)
|.++++.
T Consensus 82 L~~~l~~ 88 (269)
T cd05087 82 LKGYLRS 88 (269)
T ss_pred HHHHHHH
Confidence 9999863
No 139
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=2.5e-11 Score=115.50 Aligned_cols=89 Identities=25% Similarity=0.259 Sum_probs=79.3
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..|...+.||+|.||.||+|.. ..++.||+|.++-.. +....+..+|+.++..++++||.++||.+..+..+|++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4577778999999999999996 568899999997544 44567888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
|.||++.+.++
T Consensus 93 ~~gGsv~~lL~ 103 (467)
T KOG0201|consen 93 CGGGSVLDLLK 103 (467)
T ss_pred hcCcchhhhhc
Confidence 99999999875
No 140
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.12 E-value=2.5e-10 Score=109.77 Aligned_cols=89 Identities=19% Similarity=0.297 Sum_probs=77.1
Q ss_pred ccccccCcccCCCCceEEEEEe-----CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-----SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
++|+..+.||+|+||.||+|.. ..+..+|+|.+.... ......+.+|++++++++||||+++++++..++..|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577888999999999999984 245789999997533 3445778999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHH
Q 040301 508 MWGRLLNISITIIRR 522 (524)
Q Consensus 508 v~e~~~~gsL~~~l~ 522 (524)
||||+++|+|.+++.
T Consensus 85 v~e~~~~~~L~~~l~ 99 (283)
T cd05090 85 LFEYLNQGDLHEFLI 99 (283)
T ss_pred EEEcCCCCcHHHHHH
Confidence 999999999999984
No 141
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.12 E-value=3.6e-10 Score=106.48 Aligned_cols=84 Identities=30% Similarity=0.458 Sum_probs=74.0
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCHH
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISIT 518 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 518 (524)
+.||+|+||.||+|...+++.+|+|.+.... ......|.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3689999999999998788899999986544 334457899999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 040301 519 IIRRH 523 (524)
Q Consensus 519 ~~l~~ 523 (524)
+++++
T Consensus 81 ~~~~~ 85 (250)
T cd05085 81 SFLRK 85 (250)
T ss_pred HHHHh
Confidence 98853
No 142
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.12 E-value=3e-11 Score=121.45 Aligned_cols=89 Identities=25% Similarity=0.331 Sum_probs=75.1
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC------cce
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD------FKA 506 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~------~~~ 506 (524)
.+...+.+|+|+||.||+|+. .+|+.||||.++... ....+...+|+++|++++|||||++.+.-.+.. ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 455678999999999999994 689999999997643 445677889999999999999999998765533 468
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+|||||.+|||+..|++
T Consensus 94 lvmEyC~gGsL~~~L~~ 110 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNS 110 (732)
T ss_pred EEEeecCCCcHHHHhcC
Confidence 99999999999998864
No 143
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.12 E-value=3.2e-10 Score=107.98 Aligned_cols=89 Identities=22% Similarity=0.287 Sum_probs=78.1
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeecc---chHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQ---LERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.+|+|+||.||+|+. .+++.||||.+... .......+.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4788899999999999999996 47889999988542 2344567899999999999999999999999999999999
Q ss_pred cccCCCCHHHHHH
Q 040301 510 GRLLNISITIIRR 522 (524)
Q Consensus 510 e~~~~gsL~~~l~ 522 (524)
||+++|+|.+++.
T Consensus 82 e~~~~~~L~~~~~ 94 (267)
T cd08228 82 ELADAGDLSQMIK 94 (267)
T ss_pred EecCCCcHHHHHH
Confidence 9999999998875
No 144
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.12 E-value=1.5e-10 Score=114.65 Aligned_cols=92 Identities=22% Similarity=0.346 Sum_probs=76.7
Q ss_pred hhccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcC-
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNP- 502 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~- 502 (524)
..++|+..+.||+|+||.||+|.. .+++.||||.++... ....+.+.+|+.++.++ +||||++++++|...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 346799999999999999999973 346789999997543 33456788999999999 689999999988654
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
...++|||||++|+|.++++.
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~ 105 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRS 105 (343)
T ss_pred CceEEEEeccCCCcHHHHHHh
Confidence 568999999999999999863
No 145
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.12 E-value=2.9e-10 Score=107.23 Aligned_cols=84 Identities=23% Similarity=0.402 Sum_probs=73.6
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
+.||+|+||.||+|+. .+++.+|+|.+.... ......|.+|++++++++||||++++++|......++||||+++|+|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999996 468889999886433 34456799999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
.+++++
T Consensus 81 ~~~~~~ 86 (252)
T cd05084 81 LTFLRT 86 (252)
T ss_pred HHHHHh
Confidence 999853
No 146
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.12 E-value=2.2e-10 Score=108.35 Aligned_cols=89 Identities=24% Similarity=0.304 Sum_probs=77.7
Q ss_pred ccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.+|+..+.+|+|+||.||++...++..+|+|.+..... ...+|.+|+++++.++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35788899999999999999987677899999865332 34568899999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.+++++
T Consensus 83 ~~~L~~~l~~ 92 (256)
T cd05059 83 NGCLLNYLRE 92 (256)
T ss_pred CCCHHHHHHh
Confidence 9999999863
No 147
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.12 E-value=3.3e-10 Score=111.32 Aligned_cols=83 Identities=22% Similarity=0.211 Sum_probs=72.8
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 515 (524)
+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+++++.++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999996 468899999997542 234567889999999999999999999999999999999999999
Q ss_pred CHHHHHH
Q 040301 516 SITIIRR 522 (524)
Q Consensus 516 sL~~~l~ 522 (524)
+|.+++.
T Consensus 81 ~L~~~l~ 87 (328)
T cd05593 81 ELFFHLS 87 (328)
T ss_pred CHHHHHH
Confidence 9998875
No 148
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.12 E-value=3.1e-10 Score=109.92 Aligned_cols=91 Identities=24% Similarity=0.237 Sum_probs=80.9
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
...|+..+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36788999999999999999995 57889999999765544557788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 98 ~~~~~L~~~~~~ 109 (297)
T cd06656 98 LAGGSLTDVVTE 109 (297)
T ss_pred cCCCCHHHHHHh
Confidence 999999998753
No 149
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.12 E-value=2.9e-10 Score=107.47 Aligned_cols=89 Identities=22% Similarity=0.240 Sum_probs=78.5
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeecc--chHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQ--LERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.+|+|++|.||+|+. .+++.+|+|.+... ......++.+|++++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 477788999999999999996 46889999998643 244567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.++++.
T Consensus 81 ~~~~~L~~~l~~ 92 (256)
T cd08529 81 AENGDLHKLLKM 92 (256)
T ss_pred CCCCcHHHHHHH
Confidence 999999999854
No 150
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.12 E-value=2.8e-10 Score=111.68 Aligned_cols=84 Identities=15% Similarity=0.225 Sum_probs=72.3
Q ss_pred CcccCCCCceEEEEEe----CCCCEEEEEEeeccc----hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 440 NLLGTGSFGSVYKGTI----SDWTNVAIKIFNLQL----ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 357889999997532 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 82 ~~~~~L~~~~~~ 93 (323)
T cd05584 82 LSGGELFMHLER 93 (323)
T ss_pred CCCchHHHHHHH
Confidence 999999998853
No 151
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.12 E-value=3.1e-10 Score=107.99 Aligned_cols=90 Identities=23% Similarity=0.275 Sum_probs=79.4
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.+|+|+||.||+|... +++.+|+|.++... ....+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999974 78999999886422 334668899999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 82 e~~~~~~L~~~l~~ 95 (267)
T cd08224 82 ELADAGDLSRMIKH 95 (267)
T ss_pred ecCCCCCHHHHHHH
Confidence 99999999998853
No 152
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.11 E-value=2.6e-10 Score=107.86 Aligned_cols=89 Identities=22% Similarity=0.284 Sum_probs=79.4
Q ss_pred hccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.++|+..+.+|+|+||.||+|... ++.+|+|.+..... ..+++.+|+.++++++|+||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888899999999999999974 78899999976543 5678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 83 ~~~~L~~~~~~ 93 (256)
T cd05039 83 AKGSLVDYLRS 93 (256)
T ss_pred CCCcHHHHHHh
Confidence 99999999864
No 153
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.11 E-value=2.5e-10 Score=108.31 Aligned_cols=90 Identities=20% Similarity=0.310 Sum_probs=77.8
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..++|+..+.||+|+||.||+|...+++.+|+|.+..... ...+|.+|+.++++++||||+++++++ ..+..++||||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEc
Confidence 3467888999999999999999988888999999975442 346789999999999999999999987 45679999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 82 ~~~~~L~~~~~~ 93 (260)
T cd05067 82 MENGSLVDFLKT 93 (260)
T ss_pred CCCCCHHHHHHh
Confidence 999999998853
No 154
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.11 E-value=2.5e-10 Score=118.03 Aligned_cols=88 Identities=19% Similarity=0.120 Sum_probs=76.9
Q ss_pred cccccCcccCCCCceEEEEEe-CC-CCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SD-WTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~-~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.|...+.+|+|+||.||+|.. .+ +..||+|.+..........+.+|+.+++.++|||||++++++..++..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 488889999999999999985 33 5778899876555555567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
++|+|.++++
T Consensus 148 ~gg~L~~~l~ 157 (478)
T PTZ00267 148 SGGDLNKQIK 157 (478)
T ss_pred CCCCHHHHHH
Confidence 9999998875
No 155
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.11 E-value=1.2e-10 Score=120.32 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=76.6
Q ss_pred ccccccCcccCCCCceEEEEEeCCC-CEEEEEEeeccchHHHHHHHHHHHHHhcCC-CCCccceeEEE-Ec------CCc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISDW-TNVAIKIFNLQLERAFRSFDSECEVLRNVC-HRNLIKILSSC-SN------PDF 504 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~~-~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~-~~------~~~ 504 (524)
-.+++.+.|.+|||+.||.|+...+ ..||+|++-...+...+.+.+||++|+.+. |+|||.+++.. .. .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 4467778999999999999997554 899999997767778899999999999996 99999999932 22 136
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
++|+||||.||+|-|||.+
T Consensus 117 vllLmEyC~gg~Lvd~mn~ 135 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNT 135 (738)
T ss_pred EEeehhhccCCcHHHHHHH
Confidence 7899999999999999975
No 156
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.11 E-value=3.9e-10 Score=110.94 Aligned_cols=84 Identities=14% Similarity=0.180 Sum_probs=72.2
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.||+|.++... ....+.+.+|+.++..+ +||||+++++++.+.+..|+|||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999996 468899999997643 23345688999999988 799999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 g~L~~~~~~ 89 (329)
T cd05588 81 GDLMFHMQR 89 (329)
T ss_pred CCHHHHHHH
Confidence 999988753
No 157
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.11 E-value=4.4e-10 Score=106.32 Aligned_cols=88 Identities=26% Similarity=0.388 Sum_probs=77.3
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-----hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-----ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++..++..++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 667789999999999999975 78899999986432 234567899999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++++|.+++++
T Consensus 82 e~~~~~~L~~~~~~ 95 (258)
T cd06632 82 ELVPGGSLAKLLKK 95 (258)
T ss_pred EecCCCcHHHHHHh
Confidence 99999999999864
No 158
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.10 E-value=7.8e-12 Score=126.42 Aligned_cols=243 Identities=26% Similarity=0.269 Sum_probs=106.7
Q ss_pred cccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccc
Q 040301 42 NLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEI 121 (524)
Q Consensus 42 ~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 121 (524)
.+..++.+.+..|.+..+. ..+..+++|+.|++.+|.|..+.. .+..+. +|+.|++++|.|+...+ +
T Consensus 70 ~l~~l~~l~l~~n~i~~~~---------~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~-~L~~L~ls~N~I~~i~~--l 136 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKIL---------NHLSKLKSLEALDLYDNKIEKIEN-LLSSLV-NLQVLDLSFNKITKLEG--L 136 (414)
T ss_pred HhHhHHhhccchhhhhhhh---------cccccccceeeeeccccchhhccc-chhhhh-cchheeccccccccccc--h
Confidence 3445555556666665421 234555666666666666663322 123333 45555555555543222 3
Q ss_pred cCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCC-ccccCCCCCCEEEccCCcccccCCccccCCCCCC
Q 040301 122 GNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIP-YDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLR 200 (524)
Q Consensus 122 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 200 (524)
..++.|+.|++++|.++.+ ..+..++.|+.+++++|++...-+ . ...+. +++
T Consensus 137 ~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~------------------------~l~ 189 (414)
T KOG0531|consen 137 STLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELI------------------------SLE 189 (414)
T ss_pred hhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhcc------------------------chH
Confidence 3444455555555555422 223334455555555555442222 1 23444 444
Q ss_pred EEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCC--CCCEEEcCCCcCccccccccccCCCCEEEccCC
Q 040301 201 ELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLK--VLRVLDLSRNQLSGDISTIGALVDLETLSLASN 278 (524)
Q Consensus 201 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N 278 (524)
.+++.+|.+.. ...+..+..+..+++..|.+...-+ +..+. .|+.+++++|.+...+..+..+.++..|++.+|
T Consensus 190 ~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n 265 (414)
T KOG0531|consen 190 ELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSN 265 (414)
T ss_pred HHhccCCchhc--ccchHHHHHHHHhhcccccceeccC--cccchhHHHHHHhcccCccccccccccccccccccchhhc
Confidence 44444444431 1222223333333444444432111 11111 145555555555433233444445555555555
Q ss_pred cccCCCcccccCCCCCCEEeCCCCcCCCC---Ccc-cccCCCCCCeEEccCCcCcc
Q 040301 279 QFQGPIPESVGSLISLESLDLSGNNLSGK---IPK-SLETLSHLKQFNASHNRLEG 330 (524)
Q Consensus 279 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~---~~~-~~~~l~~L~~l~l~~n~l~~ 330 (524)
++... ..+...+.+..+....|.+... ... .....+.+..+.+..|+...
T Consensus 266 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 266 RISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred ccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 55422 2233344444555555554311 111 13344555666666665544
No 159
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.10 E-value=2.8e-10 Score=110.12 Aligned_cols=90 Identities=20% Similarity=0.289 Sum_probs=76.6
Q ss_pred hccccccCcccCCCCceEEEEEeCC---------------CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCcccee
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISD---------------WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKIL 496 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~ 496 (524)
.++|+..+.||+|+||.||++.... ...||+|.+.... ......|.+|++++++++||||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3578889999999999999987521 2348999987543 33456799999999999999999999
Q ss_pred EEEEcCCcceEEEcccCCCCHHHHHH
Q 040301 497 SSCSNPDFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 497 ~~~~~~~~~~lv~e~~~~gsL~~~l~ 522 (524)
+++...+..++||||+++|+|.+++.
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~ 109 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLS 109 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHH
Confidence 99999999999999999999999885
No 160
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.10 E-value=3.9e-10 Score=108.87 Aligned_cols=90 Identities=22% Similarity=0.228 Sum_probs=78.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|+..+.||+|+||.||++.. .+++.+|+|.+.... ......+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 3688889999999999999996 468899999996533 234567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 e~~~~~~L~~~~~~ 94 (290)
T cd05580 81 EYVPGGELFSHLRK 94 (290)
T ss_pred ecCCCCCHHHHHHH
Confidence 99999999999864
No 161
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.09 E-value=4.1e-10 Score=108.82 Aligned_cols=91 Identities=21% Similarity=0.248 Sum_probs=81.1
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
..+.|+..+.+|+|+||.||+|+. .++..+|+|.+........+.+.+|+++++.++||||+++++++..+...++|||
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 346788999999999999999997 4578899999977665567789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|+++|+|..+++
T Consensus 90 ~~~~~~l~~~~~ 101 (292)
T cd06644 90 FCPGGAVDAIML 101 (292)
T ss_pred cCCCCcHHHHHH
Confidence 999999988774
No 162
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.09 E-value=4.2e-10 Score=108.49 Aligned_cols=89 Identities=24% Similarity=0.366 Sum_probs=78.1
Q ss_pred ccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.+|...+.+|+|+||.||++.. .++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4688889999999999999984 2345689999876555566789999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHH
Q 040301 508 MWGRLLNISITIIRR 522 (524)
Q Consensus 508 v~e~~~~gsL~~~l~ 522 (524)
||||+++|+|.++++
T Consensus 85 v~e~~~~~~L~~~i~ 99 (288)
T cd05093 85 VFEYMKHGDLNKFLR 99 (288)
T ss_pred EEEcCCCCCHHHHHH
Confidence 999999999999986
No 163
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.09 E-value=2.8e-10 Score=109.55 Aligned_cols=98 Identities=19% Similarity=0.275 Sum_probs=82.2
Q ss_pred cchhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEE-
Q 040301 424 TSYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCS- 500 (524)
Q Consensus 424 ~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~- 500 (524)
+.++.+..+.++|+..+.||+|+||.||++.. .+++.+|+|.+..... ...++.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 45677778899999999999999999999996 4678899998865332 335678899999999 6999999999884
Q ss_pred ----cCCcceEEEcccCCCCHHHHHH
Q 040301 501 ----NPDFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 501 ----~~~~~~lv~e~~~~gsL~~~l~ 522 (524)
.++..++||||+++|+|.++++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~ 112 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVK 112 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHH
Confidence 3456899999999999998875
No 164
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.09 E-value=5e-10 Score=106.77 Aligned_cols=83 Identities=20% Similarity=0.203 Sum_probs=70.5
Q ss_pred cccCCCCceEEEEEeCC---CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCC
Q 040301 441 LLGTGSFGSVYKGTISD---WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNIS 516 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 516 (524)
.||+|+||.||+|...+ ...+|+|.+.... ......|.+|+++++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997533 3468888876443 3345678899999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 040301 517 ITIIRRH 523 (524)
Q Consensus 517 L~~~l~~ 523 (524)
|.+++++
T Consensus 82 L~~~l~~ 88 (269)
T cd05042 82 LKNYLRS 88 (269)
T ss_pred HHHHHHh
Confidence 9999864
No 165
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.09 E-value=3.8e-10 Score=110.82 Aligned_cols=88 Identities=17% Similarity=0.193 Sum_probs=72.5
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHH---hcCCCCCccceeEEEEcCCcceEE
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVL---RNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l---~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
|+..+.||+|+||.||+|.. .+++.||||.++... ....+.+.+|++++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56678999999999999996 468899999997543 22345566776654 567899999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|||+++|+|..++++
T Consensus 81 ~E~~~~~~L~~~~~~ 95 (324)
T cd05589 81 MEYAAGGDLMMHIHT 95 (324)
T ss_pred EcCCCCCcHHHHhhc
Confidence 999999999887753
No 166
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.09 E-value=3.3e-10 Score=108.42 Aligned_cols=90 Identities=20% Similarity=0.352 Sum_probs=77.8
Q ss_pred ccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccchH-HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQLER-AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
++|+....+|+|+||.||+|+.. +.+.+|+|.+...... ..+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999952 2456899988654433 4578999999999999999999999999999999
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+||||+++|+|.+++++
T Consensus 85 lv~e~~~~~~L~~~i~~ 101 (275)
T cd05046 85 MILEYTDLGDLKQFLRA 101 (275)
T ss_pred EEEEecCCCcHHHHHHh
Confidence 99999999999999864
No 167
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.09 E-value=3.4e-10 Score=109.18 Aligned_cols=89 Identities=21% Similarity=0.290 Sum_probs=76.3
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|+..+.||+|+||.||+|.. .+++.||+|.++... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 4688899999999999999996 468899999996433 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
++ |+|.++++.
T Consensus 85 ~~-~~l~~~l~~ 95 (288)
T cd07871 85 LD-SDLKQYLDN 95 (288)
T ss_pred CC-cCHHHHHHh
Confidence 98 599988753
No 168
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.09 E-value=2.5e-10 Score=109.89 Aligned_cols=90 Identities=21% Similarity=0.252 Sum_probs=79.0
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|+..+.||+|+||.||++... ++..+|+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36788899999999999999974 68899999986532 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++++
T Consensus 81 ~~~~~l~~~~~~ 92 (286)
T cd06622 81 MDAGSLDKLYAG 92 (286)
T ss_pred cCCCCHHHHHHh
Confidence 999999998864
No 169
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.09 E-value=3.4e-10 Score=107.55 Aligned_cols=90 Identities=21% Similarity=0.316 Sum_probs=78.7
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..+|+..+.||+|+||.||+|.. ..++.+|+|.+.... ....++.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 34678889999999999999996 457889999987543 2456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.++++.
T Consensus 84 ~~~~~L~~~~~~ 95 (263)
T cd05052 84 MTYGNLLDYLRE 95 (263)
T ss_pred CCCCcHHHHHHh
Confidence 999999999853
No 170
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.09 E-value=4.8e-10 Score=108.54 Aligned_cols=90 Identities=23% Similarity=0.237 Sum_probs=80.1
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
..|+..+.+|+|+||.||+|.. .+++.+|+|.+........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 5688889999999999999995 568899999997655445677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 100 ~~~~L~~~~~~ 110 (296)
T cd06654 100 AGGSLTDVVTE 110 (296)
T ss_pred CCCCHHHHHHh
Confidence 99999998853
No 171
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.09 E-value=4.5e-10 Score=107.99 Aligned_cols=90 Identities=24% Similarity=0.436 Sum_probs=77.4
Q ss_pred ccccccCcccCCCCceEEEEEeCC------CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISD------WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
.+|+..+.||+|+||.||+|.... ...+|+|.+.... ....++|.+|+.++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468888999999999999998532 2569999987543 334567999999999999999999999999999999
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
++|||+++|+|.+++++
T Consensus 85 ~~~e~~~~~~L~~~l~~ 101 (283)
T cd05048 85 MLFEYLAHGDLHEFLVR 101 (283)
T ss_pred EEEecCCCCcHHHHHHh
Confidence 99999999999999863
No 172
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.09 E-value=4e-10 Score=108.00 Aligned_cols=92 Identities=20% Similarity=0.289 Sum_probs=79.1
Q ss_pred hhccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF 504 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~ 504 (524)
..++|...+.||+|+||.||+|... .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 4567889999999999999999963 35678999886543 3345679999999999999999999999999999
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
.++||||+++|+|.+++++
T Consensus 84 ~~lv~e~~~g~~L~~~i~~ 102 (277)
T cd05036 84 RFILLELMAGGDLKSFLRE 102 (277)
T ss_pred cEEEEecCCCCCHHHHHHH
Confidence 9999999999999999853
No 173
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.09 E-value=3.7e-10 Score=109.73 Aligned_cols=89 Identities=22% Similarity=0.335 Sum_probs=76.2
Q ss_pred hccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.++|+..+.||+|+||.||+|... +++.||||.+.... ......+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999974 68899999996433 2233467789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|++ |+|.+++.
T Consensus 84 ~~~-~~l~~~~~ 94 (303)
T cd07869 84 YVH-TDLCQYMD 94 (303)
T ss_pred CCC-cCHHHHHH
Confidence 996 68888775
No 174
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.09 E-value=3.8e-10 Score=107.59 Aligned_cols=90 Identities=22% Similarity=0.300 Sum_probs=77.5
Q ss_pred ccccccCcccCCCCceEEEEEeC-CC---CEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DW---TNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
.+|...+.+|+|+||.||+|... ++ ..||+|.+.... ....++|..|+.+++.++||||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35778899999999999999963 33 359999987543 44567899999999999999999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|||+++|+|.+++++
T Consensus 84 ~e~~~~~~L~~~l~~ 98 (269)
T cd05065 84 TEFMENGALDSFLRQ 98 (269)
T ss_pred EecCCCCcHHHHHhh
Confidence 999999999999864
No 175
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.08 E-value=5.5e-10 Score=109.73 Aligned_cols=84 Identities=21% Similarity=0.177 Sum_probs=72.7
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 515 (524)
+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999996 578899999997542 234456788999999999999999999999999999999999999
Q ss_pred CHHHHHHh
Q 040301 516 SITIIRRH 523 (524)
Q Consensus 516 sL~~~l~~ 523 (524)
+|.+++.+
T Consensus 81 ~L~~~l~~ 88 (325)
T cd05594 81 ELFFHLSR 88 (325)
T ss_pred cHHHHHHh
Confidence 99988753
No 176
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.08 E-value=5.7e-10 Score=105.49 Aligned_cols=89 Identities=19% Similarity=0.117 Sum_probs=78.2
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
.|+..+.+|+|+||.||.+.. .+++.+++|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477889999999999998885 568889999986543 34566788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 81 ~~~~~L~~~~~~ 92 (256)
T cd08221 81 ANGGTLYDKIVR 92 (256)
T ss_pred cCCCcHHHHHHh
Confidence 999999999864
No 177
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.08 E-value=5e-10 Score=107.31 Aligned_cols=88 Identities=26% Similarity=0.261 Sum_probs=77.0
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
-|+..+.||+|+||.||+|.. .++..+|+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 467778999999999999986 467889999986433 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
++|+|.++++
T Consensus 85 ~~~~l~~~i~ 94 (277)
T cd06641 85 GGGSALDLLE 94 (277)
T ss_pred CCCcHHHHHh
Confidence 9999999875
No 178
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.08 E-value=5.3e-10 Score=107.33 Aligned_cols=81 Identities=17% Similarity=0.152 Sum_probs=70.2
Q ss_pred ccCCCCceEEEEEe-CCCCEEEEEEeeccch---HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 442 LGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE---RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 442 ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
||+|+||+||++.. .+++.+|+|.+..... ...+.+..|+++++.++||||+++.+++..+...++|||||++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999996 4688999999975432 2345678899999999999999999999999999999999999999
Q ss_pred HHHHH
Q 040301 518 TIIRR 522 (524)
Q Consensus 518 ~~~l~ 522 (524)
.+++.
T Consensus 81 ~~~~~ 85 (280)
T cd05608 81 RYHIY 85 (280)
T ss_pred HHHHH
Confidence 88774
No 179
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.08 E-value=4.7e-10 Score=106.82 Aligned_cols=89 Identities=20% Similarity=0.295 Sum_probs=77.5
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc------hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL------ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
+|+..+.+|+|+||.||++.. .+++.+|+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477788999999999999985 578899999986432 1235678999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 81 v~e~~~~~~L~~~l~~ 96 (268)
T cd06630 81 FVEWMAGGSVSHLLSK 96 (268)
T ss_pred EEeccCCCcHHHHHHH
Confidence 9999999999999864
No 180
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.08 E-value=5.3e-10 Score=107.13 Aligned_cols=90 Identities=27% Similarity=0.274 Sum_probs=78.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..|+..+.+|+|+||.||+|.. .++..+|+|.+.... ....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 3577788999999999999996 457889999987543 34567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.++++.
T Consensus 84 ~~~~~L~~~i~~ 95 (277)
T cd06640 84 LGGGSALDLLRA 95 (277)
T ss_pred CCCCcHHHHHhc
Confidence 999999998863
No 181
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.08 E-value=2.7e-10 Score=109.78 Aligned_cols=87 Identities=20% Similarity=0.263 Sum_probs=74.9
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.+|+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 5888899999999999999974 67889999996532 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHH
Q 040301 512 LLNISITIIR 521 (524)
Q Consensus 512 ~~~gsL~~~l 521 (524)
++++.+..+.
T Consensus 82 ~~~~~l~~~~ 91 (287)
T cd07848 82 VEKNMLELLE 91 (287)
T ss_pred CCCCHHHHHH
Confidence 9988766544
No 182
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.08 E-value=4.7e-10 Score=110.30 Aligned_cols=85 Identities=13% Similarity=0.080 Sum_probs=73.0
Q ss_pred ccCcccCC--CCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 438 ECNLLGTG--SFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 438 ~~~~ig~g--~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
...+||+| +|++||++.. .+|+.||+|+++... ....+.+.+|+++++.++||||++++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 34689999 6789999986 578999999997543 233456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
++|+|.++++
T Consensus 82 ~~~~l~~~~~ 91 (327)
T cd08227 82 AYGSAKDLIC 91 (327)
T ss_pred CCCcHHHHHH
Confidence 9999999985
No 183
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.08 E-value=3.7e-10 Score=107.25 Aligned_cols=89 Identities=22% Similarity=0.285 Sum_probs=76.0
Q ss_pred hccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
..+|...+.+|+|+||.||+|...+...||+|.+..... ..++|.+|++++++++||||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 456889999999999999999976666799999975332 3457899999999999999999999874 45689999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 83 ~~~~L~~~~~~ 93 (262)
T cd05071 83 SKGSLLDFLKG 93 (262)
T ss_pred CCCcHHHHHhh
Confidence 99999999864
No 184
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.08 E-value=6.4e-10 Score=106.69 Aligned_cols=86 Identities=19% Similarity=0.194 Sum_probs=75.3
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+|+..+.+|+|+||.||+|.. .+++.+|+|.+.... ....+++.+|++++++++||||+++++++..++..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577888999999999999996 568889999986542 334567999999999999999999999999999999999999
Q ss_pred CCCCHHHH
Q 040301 513 LNISITII 520 (524)
Q Consensus 513 ~~gsL~~~ 520 (524)
++|+|..+
T Consensus 82 ~~~~l~~~ 89 (279)
T cd06619 82 DGGSLDVY 89 (279)
T ss_pred CCCChHHh
Confidence 99998754
No 185
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.07 E-value=7.5e-10 Score=105.12 Aligned_cols=90 Identities=17% Similarity=0.307 Sum_probs=78.4
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-----hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-----ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
++|+..+.+|+|++|.||.|.. .+++.+|+|.+.... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999986 468899999986432 1234578899999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|+||+++|+|.+++++
T Consensus 82 v~e~~~~~~l~~~~~~ 97 (263)
T cd06625 82 FMEYMPGGSVKDQLKA 97 (263)
T ss_pred EEEECCCCcHHHHHHH
Confidence 9999999999998853
No 186
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.07 E-value=8.5e-11 Score=115.03 Aligned_cols=86 Identities=21% Similarity=0.325 Sum_probs=72.4
Q ss_pred hhhhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
+...+.+...+-+|+|+-|.||.|++. ++.||||+++.... -+|+.|++++||||+.+.|+|.....+||||
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl~-netVAVKKV~elkE-------TdIKHLRkLkH~NII~FkGVCtqsPcyCIiM 191 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRLH-NETVAVKKVRELKE-------TDIKHLRKLKHPNIITFKGVCTQSPCYCIIM 191 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeecc-CceehhHHHhhhhh-------hhHHHHHhccCcceeeEeeeecCCceeEEee
Confidence 333344445567899999999999985 47899998865443 3688999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
|||..|-|.+.||.
T Consensus 192 EfCa~GqL~~VLka 205 (904)
T KOG4721|consen 192 EFCAQGQLYEVLKA 205 (904)
T ss_pred eccccccHHHHHhc
Confidence 99999999999874
No 187
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.07 E-value=5.3e-10 Score=108.65 Aligned_cols=90 Identities=27% Similarity=0.405 Sum_probs=76.1
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCC--EEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWT--NVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv 508 (524)
++|+..+.||+|+||.||+|... ++. .+|+|.+.... ....+.+.+|++++.++ +||||+++++++..++..|+|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46788899999999999999963 454 36788776433 34456788999999999 899999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|||+++|+|.+++++
T Consensus 87 ~e~~~~~~L~~~l~~ 101 (303)
T cd05088 87 IEYAPHGNLLDFLRK 101 (303)
T ss_pred EEeCCCCcHHHHHHh
Confidence 999999999999863
No 188
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.07 E-value=4.4e-10 Score=108.64 Aligned_cols=91 Identities=25% Similarity=0.254 Sum_probs=80.3
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
.+.|...+.+|+|+||.||++.. .++..+|+|.+........+.+.+|+.++++++||||+++++++..++..|+|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 46788899999999999999985 46788999998755444557789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 98 ~~~~~L~~~~~~ 109 (293)
T cd06647 98 LAGGSLTDVVTE 109 (293)
T ss_pred CCCCcHHHHHhh
Confidence 999999998864
No 189
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.07 E-value=4.9e-10 Score=108.51 Aligned_cols=90 Identities=20% Similarity=0.269 Sum_probs=77.1
Q ss_pred ccccccCcccCCCCceEEEEEeC-----------------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccce
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-----------------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKI 495 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l 495 (524)
++|+..+.||+|+||.||++... ++..+|+|.+.... ....++|.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46889999999999999998531 23468999997543 3446789999999999999999999
Q ss_pred eEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 496 LSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 496 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
++++..++..++||||+++|+|.+++++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSR 112 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHh
Confidence 9999999999999999999999999864
No 190
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.07 E-value=6.7e-10 Score=105.34 Aligned_cols=91 Identities=22% Similarity=0.309 Sum_probs=81.1
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
.++|+..+.+|+|+||.||+|.. .+++.+|+|.+........+.+.+|++++++++||||+++++++...+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 35788889999999999999996 45788999999766555667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++++
T Consensus 82 ~~~~~l~~~~~~ 93 (262)
T cd06613 82 CGGGSLQDIYQV 93 (262)
T ss_pred CCCCcHHHHHHh
Confidence 999999998853
No 191
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.07 E-value=6.2e-10 Score=107.14 Aligned_cols=87 Identities=17% Similarity=0.194 Sum_probs=75.4
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
|+..+.||+|+||.||++.. .+++.+|||.+.... ......+.+|+.++++++|++|+++++++.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 66778899999999999996 468899999986543 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
+++|+|.++++
T Consensus 82 ~~g~~L~~~l~ 92 (285)
T cd05630 82 MNGGDLKFHIY 92 (285)
T ss_pred cCCCcHHHHHH
Confidence 99999999874
No 192
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.07 E-value=4.6e-10 Score=106.46 Aligned_cols=90 Identities=20% Similarity=0.304 Sum_probs=78.1
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..++|...+.+|+|+||.||++...++..+|+|.+.... ...+.|.+|++++++++|+||+++++++.. ...++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 446788999999999999999997777789999886543 245678999999999999999999999887 778999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 82 ~~~~~L~~~~~~ 93 (260)
T cd05073 82 MAKGSLLDFLKS 93 (260)
T ss_pred CCCCcHHHHHHh
Confidence 999999999864
No 193
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.07 E-value=6.3e-10 Score=107.11 Aligned_cols=87 Identities=16% Similarity=0.182 Sum_probs=75.3
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
|+..+.||+|+||.||+|.. .+++.+|+|.+.... ......+.+|+++++.++|+||+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678899999999999996 568899999996543 22345678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
+++|+|.+++.
T Consensus 82 ~~~~~L~~~~~ 92 (285)
T cd05632 82 MNGGDLKFHIY 92 (285)
T ss_pred ccCccHHHHHH
Confidence 99999998874
No 194
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.06 E-value=5.3e-10 Score=105.74 Aligned_cols=88 Identities=22% Similarity=0.332 Sum_probs=77.6
Q ss_pred ccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.+|+..+.+|+|+||.||++...++..+|+|.+..... ...+|.+|++++++++||||+++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46778889999999999999986678899998865432 34578999999999999999999999999999999999999
Q ss_pred CCCHHHHHH
Q 040301 514 NISITIIRR 522 (524)
Q Consensus 514 ~gsL~~~l~ 522 (524)
+|+|.++++
T Consensus 83 ~~~L~~~~~ 91 (256)
T cd05112 83 HGCLSDYLR 91 (256)
T ss_pred CCcHHHHHH
Confidence 999999885
No 195
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.06 E-value=4.9e-10 Score=106.66 Aligned_cols=89 Identities=21% Similarity=0.250 Sum_probs=78.4
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|...+.||+|+||.||++.. .+++.+|||.+.... ....+++.+|+++++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999995 578899999886532 234568899999999999999999999999999999999
Q ss_pred cccCCCCHHHHHH
Q 040301 510 GRLLNISITIIRR 522 (524)
Q Consensus 510 e~~~~gsL~~~l~ 522 (524)
||+++|+|.++++
T Consensus 82 e~~~~~~L~~~~~ 94 (267)
T cd08229 82 ELADAGDLSRMIK 94 (267)
T ss_pred EecCCCCHHHHHH
Confidence 9999999999886
No 196
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=1.5e-10 Score=111.94 Aligned_cols=92 Identities=14% Similarity=0.083 Sum_probs=80.7
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
.++-|...+.||+|.|+.|-.|+. -+|..||||++++.. .-......+|++.|+-++|||||++|++..++..+|+|
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 345688889999999999999885 589999999998765 23355678899999999999999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
+|.=.+|+|+|||-+
T Consensus 96 LELGD~GDl~DyImK 110 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMK 110 (864)
T ss_pred EEecCCchHHHHHHh
Confidence 999999999999843
No 197
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.06 E-value=3.2e-10 Score=107.42 Aligned_cols=89 Identities=21% Similarity=0.251 Sum_probs=78.5
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
+|+..+.||.|+||.||+|... +++.+|+|.+.... ....+.+.+|++++++++||||+++++++.+++..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778889999999999999974 58899999997543 2346789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++++|.+++++
T Consensus 81 ~~~~~~L~~~l~~ 93 (258)
T cd05578 81 LLLGGDLRYHLSQ 93 (258)
T ss_pred CCCCCCHHHHHHh
Confidence 9999999998853
No 198
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.06 E-value=5.5e-10 Score=105.94 Aligned_cols=89 Identities=21% Similarity=0.312 Sum_probs=76.6
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..++|+..+.+|+|+||.||+|...++..+|+|.+..... ..++|.+|+.++++++|+|++++++++. .+..++||||
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 3457888999999999999999987778899999875432 3467899999999999999999999885 5668999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
+++|+|.++++
T Consensus 82 ~~~~~L~~~~~ 92 (260)
T cd05070 82 MSKGSLLDFLK 92 (260)
T ss_pred cCCCcHHHHHH
Confidence 99999999885
No 199
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.06 E-value=9e-10 Score=104.11 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=77.5
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+|+..+.+|+|+||.||++.. .++..+|+|.++... ....+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 477788999999999999996 468889999986432 344567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 81 ~~~~l~~~~~~ 91 (255)
T cd08219 81 DGGDLMQKIKL 91 (255)
T ss_pred CCCcHHHHHHh
Confidence 99999998753
No 200
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.06 E-value=5.9e-10 Score=120.26 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=80.8
Q ss_pred hhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEc--
Q 040301 427 LDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSN-- 501 (524)
Q Consensus 427 ~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-- 501 (524)
.+......+|.+.+.||+|+||.||+|.. .++..+|+|.+.... ......|.+|+.+++.++|||||+++++|..
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~ 85 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA 85 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence 34445567899999999999999999996 457789999986432 3446778999999999999999999998865
Q ss_pred CCcceEEEcccCCCCHHHHHHh
Q 040301 502 PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.+.+||||||+++|+|.++|++
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k 107 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQK 107 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH
Confidence 3568999999999999998864
No 201
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.05 E-value=8.4e-10 Score=106.52 Aligned_cols=89 Identities=28% Similarity=0.375 Sum_probs=75.5
Q ss_pred cccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
+|+..+.||+|+||.||+|+.. ....+|+|.+.... ....+++.+|+.+++.++||||++++++|..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999852 22468888886543 3345678999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|+||+.+|+|.+++++
T Consensus 81 v~e~~~~~~L~~~l~~ 96 (290)
T cd05045 81 IVEYAKYGSLRSFLRE 96 (290)
T ss_pred EEEecCCCCHHHHHHh
Confidence 9999999999999863
No 202
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.05 E-value=7.5e-10 Score=105.51 Aligned_cols=91 Identities=21% Similarity=0.359 Sum_probs=78.0
Q ss_pred hccccccCcccCCCCceEEEEEeC-CC---CEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-DW---TNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
..+|+..+.+|+|+||.||+|... ++ ..+|+|.+.... ....+++.+|++++++++||||+++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356888899999999999999963 33 368999986543 3446779999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 84 v~e~~~~~~L~~~~~~ 99 (268)
T cd05063 84 ITEYMENGALDKYLRD 99 (268)
T ss_pred EEEcCCCCCHHHHHHh
Confidence 9999999999999853
No 203
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.05 E-value=6.6e-10 Score=106.12 Aligned_cols=89 Identities=21% Similarity=0.347 Sum_probs=75.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc----------hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL----------ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD 503 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~----------~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 503 (524)
.|...+.+|+|+||.||+|.. .+++.+|+|.++... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 366778999999999999985 468899999885321 112346889999999999999999999999999
Q ss_pred cceEEEcccCCCCHHHHHHh
Q 040301 504 FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~~ 523 (524)
..++||||+++|+|.+++++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~ 101 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT 101 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh
Confidence 99999999999999998864
No 204
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.05 E-value=7.5e-10 Score=108.70 Aligned_cols=89 Identities=21% Similarity=0.150 Sum_probs=75.1
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCC-CccceeEEEEcCCcceEEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHR-NLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 509 (524)
+|+..+.||+|+||.||+|... +++.||||.+.... ....+.+..|++++..+.|+ +|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999964 57889999997542 23456788899999999765 5888999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 E~~~~g~L~~~~~~ 94 (324)
T cd05587 81 EYVNGGDLMYHIQQ 94 (324)
T ss_pred cCCCCCcHHHHHHH
Confidence 99999999998853
No 205
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.05 E-value=9e-10 Score=107.16 Aligned_cols=89 Identities=15% Similarity=0.219 Sum_probs=78.1
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
+|+..+.+|+|+||.||++.. ..++.||+|.+.... ....+.+.+|+++++.++||||+++++++..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 678889999999999999996 457889999987543 2335678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 82 ~~~g~~L~~~l~~ 94 (305)
T cd05609 82 YVEGGDCATLLKN 94 (305)
T ss_pred cCCCCcHHHHHHH
Confidence 9999999999864
No 206
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.05 E-value=5.8e-10 Score=108.64 Aligned_cols=92 Identities=23% Similarity=0.332 Sum_probs=78.1
Q ss_pred hhccccccCcccCCCCceEEEEEeC--------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS--------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSN 501 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 501 (524)
..++|...+.||+|+||.||++... ++..+|+|.+.... .....++.+|+++++++ +||||++++++|..
T Consensus 16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (307)
T cd05098 16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 95 (307)
T ss_pred ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence 3467899999999999999999742 23469999997543 33456788999999999 79999999999999
Q ss_pred CCcceEEEcccCCCCHHHHHHh
Q 040301 502 PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.+..|+||||+++|+|.+++++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~i~~ 117 (307)
T cd05098 96 DGPLYVIVEYASKGNLREYLRA 117 (307)
T ss_pred CCceEEEEecCCCCcHHHHHHh
Confidence 9999999999999999999864
No 207
>PLN03150 hypothetical protein; Provisional
Probab=99.05 E-value=3.6e-10 Score=119.59 Aligned_cols=109 Identities=30% Similarity=0.416 Sum_probs=99.9
Q ss_pred CCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEcc
Q 040301 126 GLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLG 205 (524)
Q Consensus 126 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 205 (524)
.++.|+|++|.+.+..|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|++++|++.+.+|+.+..+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCccChhccCC-CCCCEEEcCCCcCc
Q 040301 206 SNKLTSSIPSSLWSL-EYILMINLSSNSLN 234 (524)
Q Consensus 206 ~n~l~~~~~~~~~~l-~~L~~L~L~~n~l~ 234 (524)
+|.+.+.+|..+... .++..+++.+|...
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccc
Confidence 999999999888764 46778899988643
No 208
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.05 E-value=8.4e-10 Score=105.96 Aligned_cols=90 Identities=21% Similarity=0.321 Sum_probs=78.3
Q ss_pred ccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.+|.....+|+|+||.||++.. .++..+|+|.+........+.|.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 4577788999999999999973 2355789999876655566789999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 85 v~e~~~~~~L~~~i~~ 100 (280)
T cd05092 85 VFEYMRHGDLNRFLRS 100 (280)
T ss_pred EEecCCCCCHHHHHHh
Confidence 9999999999999864
No 209
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.05 E-value=8.8e-10 Score=107.72 Aligned_cols=84 Identities=19% Similarity=0.204 Sum_probs=70.6
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhc-CCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRN-VCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.||||.++... ....+.+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 3689999999999997 457889999997642 2234556778888876 4999999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 g~L~~~l~~ 89 (316)
T cd05619 81 GDLMFHIQS 89 (316)
T ss_pred CcHHHHHHH
Confidence 999999864
No 210
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.05 E-value=9.3e-10 Score=108.23 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=71.3
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.+|+|.+.... ....+.+.+|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3689999999999996 467889999997542 23445677899888776 899999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~~~~ 89 (329)
T cd05618 81 GDLMFHMQR 89 (329)
T ss_pred CCHHHHHHH
Confidence 999988753
No 211
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.05 E-value=7.1e-10 Score=107.71 Aligned_cols=93 Identities=18% Similarity=0.273 Sum_probs=78.7
Q ss_pred hhhccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcC
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNP 502 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~ 502 (524)
...++|...+.||+|+||.||++.. ..+..+|+|.++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 3445788899999999999999974 124579999987543 33456789999999999 799999999999999
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+..++||||+++|+|.+++++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~ 132 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRR 132 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHh
Confidence 999999999999999999864
No 212
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.05 E-value=8.7e-10 Score=105.66 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=69.5
Q ss_pred ccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 442 LGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 442 ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
||+|+||.||++.. .+|+.||+|.+.... ....+.+..|++++++++||||+++.+++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999996 468999999996432 12344566799999999999999999999999999999999999999
Q ss_pred HHHHH
Q 040301 518 TIIRR 522 (524)
Q Consensus 518 ~~~l~ 522 (524)
.++++
T Consensus 81 ~~~~~ 85 (277)
T cd05607 81 KYHIY 85 (277)
T ss_pred HHHHH
Confidence 98874
No 213
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.05 E-value=7.6e-10 Score=108.41 Aligned_cols=84 Identities=18% Similarity=0.234 Sum_probs=71.4
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++... +||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999996 467899999997542 23345677888888876 799999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 g~L~~~i~~ 89 (320)
T cd05590 81 GDLMFHIQK 89 (320)
T ss_pred chHHHHHHH
Confidence 999998854
No 214
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.04 E-value=7.9e-10 Score=108.16 Aligned_cols=89 Identities=26% Similarity=0.349 Sum_probs=74.9
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCC----EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWT----NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.+|+..+.||+|+||.||+|++ .++. .||+|.++... ....+++.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 4688999999999999999985 3333 38999986543 34567899999999999999999999999764 5789
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|+||+++|+|.+++++
T Consensus 86 v~e~~~~g~l~~~l~~ 101 (316)
T cd05108 86 ITQLMPFGCLLDYVRE 101 (316)
T ss_pred eeecCCCCCHHHHHHh
Confidence 9999999999999864
No 215
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.04 E-value=9.2e-10 Score=104.09 Aligned_cols=89 Identities=18% Similarity=0.171 Sum_probs=77.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.+|+|+||.+|.+.. .+++.+|+|.+.... ....+++.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477889999999999999996 568899999996432 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 81 ~~~~~l~~~~~~ 92 (256)
T cd08218 81 CEGGDLYKKINA 92 (256)
T ss_pred CCCCcHHHHHHh
Confidence 999999998853
No 216
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.04 E-value=9.8e-10 Score=107.73 Aligned_cols=84 Identities=18% Similarity=0.188 Sum_probs=71.2
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|+. .+++.||+|.+.... ....+.+..|.+++..+ +||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3689999999999996 457899999997543 23345677899998866 899999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~l~~ 89 (321)
T cd05591 81 GDLMFQIQR 89 (321)
T ss_pred CcHHHHHHH
Confidence 999988753
No 217
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.04 E-value=6.8e-10 Score=107.30 Aligned_cols=95 Identities=22% Similarity=0.342 Sum_probs=79.9
Q ss_pred hhhhhccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCS 500 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~ 500 (524)
+....++|+..+.||+|+||.||++... ....+|+|.+.... .+...++.+|++++.++ +||||+++++++.
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 3445567888999999999999999853 23578999987533 33456788999999999 8999999999999
Q ss_pred cCCcceEEEcccCCCCHHHHHHh
Q 040301 501 NPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 501 ~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.++..++||||+++|+|.+++++
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~ 109 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRA 109 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHh
Confidence 99999999999999999999853
No 218
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.04 E-value=9.6e-10 Score=105.94 Aligned_cols=88 Identities=17% Similarity=0.117 Sum_probs=75.3
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--CcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 510 (524)
+|+..+.+|.|++|.||++.. .+++.+|+|.+.... .....++.+|++++++++||||++++++|... ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 577788999999999999997 467889999997543 23456789999999999999999999998654 36899999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|+++|+|.++++
T Consensus 82 ~~~~~~L~~~l~ 93 (287)
T cd06621 82 YCEGGSLDSIYK 93 (287)
T ss_pred ecCCCCHHHHHH
Confidence 999999998875
No 219
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.4e-10 Score=108.27 Aligned_cols=85 Identities=25% Similarity=0.439 Sum_probs=69.4
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--C---cceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--D---FKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~---~~~l 507 (524)
-.|+..+++|.|+||.||+|.. .++..||||+.-+..... -+|..+|+.++|||||++..+|... . +..+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 3577788999999999999996 457889999986544211 2699999999999999999998653 2 4569
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|||||+. +|.+++|+
T Consensus 100 VleymP~-tL~~~~r~ 114 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRH 114 (364)
T ss_pred HHHhchH-HHHHHHHH
Confidence 9999996 99999985
No 220
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.04 E-value=9.4e-11 Score=107.00 Aligned_cols=84 Identities=19% Similarity=0.255 Sum_probs=76.6
Q ss_pred CcccCCCCceEEEEE-eCCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 440 NLLGTGSFGSVYKGT-ISDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
+.+|+|.|+.|-.+. ..+|..||||++++.....+....+|++++..+ .|+||++++++|.++..+|+|||-|.||.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 579999999999888 578999999999877666678888999999999 599999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
...|++
T Consensus 164 LshI~~ 169 (463)
T KOG0607|consen 164 LSHIQK 169 (463)
T ss_pred HHHHHH
Confidence 999865
No 221
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.04 E-value=1.2e-09 Score=107.20 Aligned_cols=84 Identities=19% Similarity=0.243 Sum_probs=69.3
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHH-HHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECE-VLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|+. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999997 468899999997543 223345556654 57889999999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~l~~ 89 (321)
T cd05603 81 GELFFHLQR 89 (321)
T ss_pred CCHHHHHHH
Confidence 999988753
No 222
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.04 E-value=1.1e-09 Score=107.34 Aligned_cols=84 Identities=19% Similarity=0.200 Sum_probs=71.5
Q ss_pred CcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++..+ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999974 57889999997543 23345677899998877 799999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~~~~ 89 (318)
T cd05570 81 GDLMFHIQR 89 (318)
T ss_pred CCHHHHHHH
Confidence 999988753
No 223
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.04 E-value=1.1e-09 Score=103.52 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=78.2
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.+|+|+||.||++.. .+++.+|+|.+.... ....+.+.+|++++++++||||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477888999999999999996 467889999996543 33467889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 81 ~~~~~L~~~~~~ 92 (256)
T cd08220 81 APGGTLAEYIQK 92 (256)
T ss_pred CCCCCHHHHHHH
Confidence 999999999864
No 224
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.03 E-value=1.1e-09 Score=105.31 Aligned_cols=90 Identities=26% Similarity=0.300 Sum_probs=77.1
Q ss_pred ccccccCcccCCCCceEEEEEeC-----CCCEEEEEEeeccch-HHHHHHHHHHHHHhcCCCCCccceeEEEEc--CCcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-----DWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVCHRNLIKILSSCSN--PDFK 505 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~ 505 (524)
++|+..+.+|+|+||.||++++. ++..+|||.+..... ...+.|.+|++++++++||||+++++++.. +...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777889999999999999853 367899999975543 256789999999999999999999999987 5678
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++|+|.+++++
T Consensus 84 ~lv~e~~~~~~l~~~l~~ 101 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQR 101 (284)
T ss_pred EEEEecCCCCCHHHHHHh
Confidence 999999999999999864
No 225
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.03 E-value=8.2e-10 Score=105.76 Aligned_cols=91 Identities=24% Similarity=0.308 Sum_probs=78.3
Q ss_pred hccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
.++|...+.+|+|+||.||+|... .+..+|+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 457888899999999999999863 23679999986543 34456788999999999999999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++|+|.+++++
T Consensus 85 ~~v~e~~~~~~L~~~l~~ 102 (277)
T cd05032 85 LVVMELMAKGDLKSYLRS 102 (277)
T ss_pred EEEEecCCCCCHHHHHHh
Confidence 999999999999999853
No 226
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.03 E-value=4.4e-10 Score=107.71 Aligned_cols=88 Identities=26% Similarity=0.274 Sum_probs=76.6
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++..++..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 466778899999999999986 457789999987443 344567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
++|+|.++++
T Consensus 85 ~~~~L~~~~~ 94 (277)
T cd06642 85 GGGSALDLLK 94 (277)
T ss_pred CCCcHHHHhh
Confidence 9999998875
No 227
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.03 E-value=9.8e-10 Score=105.58 Aligned_cols=87 Identities=20% Similarity=0.281 Sum_probs=77.3
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
|+..+.+|+|+||.||+|... ++..+|+|.+........+.+.+|+++++.++||||+++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 567788999999999999974 5778899998765555667899999999999999999999999999999999999999
Q ss_pred CCHHHHHH
Q 040301 515 ISITIIRR 522 (524)
Q Consensus 515 gsL~~~l~ 522 (524)
|+|.+++.
T Consensus 87 ~~l~~~~~ 94 (282)
T cd06643 87 GAVDAVML 94 (282)
T ss_pred CcHHHHHH
Confidence 99998874
No 228
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.03 E-value=2.6e-11 Score=122.68 Aligned_cols=194 Identities=24% Similarity=0.291 Sum_probs=132.2
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcC
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNF 99 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 99 (524)
.++..+++..|.+. .+-..+..+.+|+.|++..|+|..+. ..+..+++|++|++++|.|+...+ +..+
T Consensus 72 ~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i~---------~~l~~~~~L~~L~ls~N~I~~i~~--l~~l 139 (414)
T KOG0531|consen 72 TSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKIE---------NLLSSLVNLQVLDLSFNKITKLEG--LSTL 139 (414)
T ss_pred HhHHhhccchhhhh-hhhcccccccceeeeeccccchhhcc---------cchhhhhcchheeccccccccccc--hhhc
Confidence 45566667777777 34445778899999999999998873 227778999999999999996644 4455
Q ss_pred cccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCC-ccccCCCCCCeEecccCcccccCCccccCCCCCCEE
Q 040301 100 SASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTIS-PTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGI 178 (524)
Q Consensus 100 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 178 (524)
. .|+.|++.+|.+.. ...+..++.|+.+++++|++....+ . ...+.+++.+++.+|.+... ..+..+..+..+
T Consensus 140 ~-~L~~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~ 213 (414)
T KOG0531|consen 140 T-LLKELNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLL 213 (414)
T ss_pred c-chhhheeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHh
Confidence 5 69999999999974 3346668999999999999986544 2 57889999999999998732 233334444445
Q ss_pred EccCCcccccCCccccCCCC--CCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCc
Q 040301 179 RLTGNKLSGHIPPCLASLTS--LRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLN 234 (524)
Q Consensus 179 ~l~~n~l~~~~~~~~~~l~~--L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 234 (524)
++..|.+...-+ +..+.. |+.+++.+|++. ..+..+..+..+..+++.+|++.
T Consensus 214 ~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 214 SLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred hcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccc
Confidence 666776653221 122222 566666666665 22233444455555555555543
No 229
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.03 E-value=1e-09 Score=104.93 Aligned_cols=89 Identities=22% Similarity=0.208 Sum_probs=78.4
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+|+..+.+|.|+||.||+|.. .+++.+|+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 578888999999999999996 467889999987543 334567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.++++.
T Consensus 82 ~~~~L~~~~~~ 92 (274)
T cd06609 82 GGGSCLDLLKP 92 (274)
T ss_pred CCCcHHHHHhh
Confidence 99999998864
No 230
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.03 E-value=1.2e-09 Score=105.66 Aligned_cols=91 Identities=20% Similarity=0.287 Sum_probs=78.1
Q ss_pred hccccccCcccCCCCceEEEEEeCC-----------------CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISD-----------------WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIK 494 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~ 494 (524)
..+|+..+.||+|+||.||+|.... +..+|+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578899999999999999988532 2458999987543 345678999999999999999999
Q ss_pred eeEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 495 ILSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 495 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+++++..++..++||||+++|+|.+++++
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQK 112 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHh
Confidence 99999999999999999999999999864
No 231
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.03 E-value=1.3e-09 Score=106.99 Aligned_cols=84 Identities=20% Similarity=0.258 Sum_probs=69.2
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHH-HHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECE-VLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||+||+|.. .+++.||+|.+.... ....+.+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 3689999999999997 478999999997543 223345555655 46789999999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 g~L~~~l~~ 89 (323)
T cd05575 81 GELFFHLQR 89 (323)
T ss_pred CCHHHHHHh
Confidence 999988753
No 232
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.03 E-value=1.4e-09 Score=103.77 Aligned_cols=83 Identities=18% Similarity=0.212 Sum_probs=69.6
Q ss_pred cccCCCCceEEEEEeCCC---CEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCC
Q 040301 441 LLGTGSFGSVYKGTISDW---TNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNIS 516 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 516 (524)
.||+|+||.||+|...++ ..+++|.+.... ....+.|.+|+.+++.++||||++++++|......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985332 346677665433 3456789999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 040301 517 ITIIRRH 523 (524)
Q Consensus 517 L~~~l~~ 523 (524)
|.+++++
T Consensus 82 L~~~l~~ 88 (268)
T cd05086 82 LKSYLSQ 88 (268)
T ss_pred HHHHHHh
Confidence 9999864
No 233
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.03 E-value=1.2e-09 Score=103.83 Aligned_cols=90 Identities=19% Similarity=0.335 Sum_probs=75.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-----hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--Ccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-----ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFK 505 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 505 (524)
.+|+..+.+|+|+||.||.|.. .++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688889999999999999996 468899999885321 23356788999999999999999999998764 467
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++|+|.+++++
T Consensus 82 ~~v~e~~~~~~L~~~l~~ 99 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS 99 (265)
T ss_pred EEEEEecCCCcHHHHHHH
Confidence 899999999999999853
No 234
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.03 E-value=9.8e-10 Score=106.11 Aligned_cols=89 Identities=24% Similarity=0.360 Sum_probs=77.7
Q ss_pred ccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
++|...+.+|+|+||.||+|.. .++..+|+|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4677888999999999999984 2345689999876655556789999999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHH
Q 040301 508 MWGRLLNISITIIRR 522 (524)
Q Consensus 508 v~e~~~~gsL~~~l~ 522 (524)
||||+++|+|.++++
T Consensus 85 v~e~~~~~~L~~~i~ 99 (291)
T cd05094 85 VFEYMKHGDLNKFLR 99 (291)
T ss_pred EEecCCCCcHHHHHH
Confidence 999999999999985
No 235
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.03 E-value=1.2e-09 Score=106.90 Aligned_cols=84 Identities=19% Similarity=0.199 Sum_probs=69.4
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhc-CCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRN-VCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.||+|.++... ....+.+..|.+++.. .+||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999996 457889999997543 2234456677777765 4899999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 g~L~~~~~~ 89 (316)
T cd05592 81 GDLMFHIQS 89 (316)
T ss_pred CcHHHHHHH
Confidence 999998853
No 236
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.03 E-value=9.3e-10 Score=106.55 Aligned_cols=90 Identities=22% Similarity=0.244 Sum_probs=79.7
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
..|+..+.+|.|+||.||+|.. .+++.||+|.+........+.+.+|+++++.++||||+++++++..++..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4588889999999999999985 578899999997654445677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 99 ~~~~L~~~~~~ 109 (296)
T cd06655 99 AGGSLTDVVTE 109 (296)
T ss_pred CCCcHHHHHHh
Confidence 99999998753
No 237
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=3.2e-10 Score=113.26 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=79.5
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
+.|...+.+|.|+-|.|..|+. .+|+..|||++.+.. ........+||.+|+-+.||||+++|+++.+..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 5578889999999999999995 689999999997653 223455779999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|.|+++|.+
T Consensus 92 Eyv~gGELFdylv~ 105 (786)
T KOG0588|consen 92 EYVPGGELFDYLVR 105 (786)
T ss_pred EecCCchhHHHHHh
Confidence 99999999999854
No 238
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.03 E-value=1.2e-09 Score=103.29 Aligned_cols=87 Identities=23% Similarity=0.256 Sum_probs=78.5
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
++|+..+.+|+|+||.||+|... +++.+|+|.+..... .+++.+|++++++++||||+++++++..++..|+++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 57889999999999999999975 478899999875432 678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
++++|.++++
T Consensus 81 ~~~~L~~~l~ 90 (256)
T cd06612 81 GAGSVSDIMK 90 (256)
T ss_pred CCCcHHHHHH
Confidence 9999999985
No 239
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.02 E-value=1.1e-09 Score=105.47 Aligned_cols=92 Identities=22% Similarity=0.221 Sum_probs=82.1
Q ss_pred hhhccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
..++.|+..+.+|+|+||.||+|... ++..+|+|.+..... ..+.+.+|++.+++++|+||+++++++..++..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 46677888999999999999999975 678899999976544 5567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++++|.+++++
T Consensus 95 e~~~~~~L~~~l~~ 108 (286)
T cd06614 95 EYMDGGSLTDIITQ 108 (286)
T ss_pred eccCCCcHHHHHHH
Confidence 99999999999864
No 240
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.02 E-value=1.1e-09 Score=107.91 Aligned_cols=89 Identities=17% Similarity=0.185 Sum_probs=75.8
Q ss_pred cccccCcccCCCCceEEEEEe----CCCCEEEEEEeeccc----hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI----SDWTNVAIKIFNLQL----ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 505 (524)
+|+..+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+.++..+ +||+|+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999885 357889999997532 22345678999999999 599999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++|+|.+++++
T Consensus 81 ~lv~e~~~~g~L~~~l~~ 98 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ 98 (332)
T ss_pred EEEEeCCCCCcHHHHHHH
Confidence 999999999999998853
No 241
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.02 E-value=1.2e-09 Score=105.10 Aligned_cols=90 Identities=23% Similarity=0.280 Sum_probs=76.0
Q ss_pred ccccccCcccCCCCceEEEEEe-----CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--Ccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-----SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFK 505 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 505 (524)
.-|+..+.||+|+||.||.+.+ .++..||+|.+.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467888999999999999984 346789999987543 33456799999999999999999999999875 568
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++|+|.+++++
T Consensus 84 ~lv~e~~~g~~L~~~l~~ 101 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPR 101 (284)
T ss_pred EEEEEccCCCCHHHHHHh
Confidence 999999999999999853
No 242
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.02 E-value=1.3e-09 Score=103.44 Aligned_cols=89 Identities=17% Similarity=0.178 Sum_probs=79.8
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccch-HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+|+..+.||+|++|.||+|+.. +++.+|+|++..... ...+.+.+|++.+.+++|+||+++++++..++..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 6788899999999999999974 588999999976543 45678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++++|.+++.+
T Consensus 82 ~~~~L~~~l~~ 92 (264)
T cd06623 82 DGGSLADLLKK 92 (264)
T ss_pred CCCcHHHHHHH
Confidence 99999999864
No 243
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.02 E-value=1.5e-09 Score=103.29 Aligned_cols=90 Identities=22% Similarity=0.290 Sum_probs=79.3
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|+..+.+|.|+||.||+|.. .++..+|+|.+.... ....+.+.+|++.++.++|+||+++++.+..++..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 3688899999999999999996 467889999986433 33567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++++
T Consensus 81 ~~~~~l~~~~~~ 92 (267)
T cd06610 81 LSGGSLLDIMKS 92 (267)
T ss_pred cCCCcHHHHHHH
Confidence 999999999864
No 244
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.02 E-value=9.6e-10 Score=104.26 Aligned_cols=89 Identities=21% Similarity=0.261 Sum_probs=75.6
Q ss_pred hccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.++|.....||+|+||.||+|....+..+|+|.+..... ..+.+.+|+.++++++|||++++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 356888899999999999999987667799998865432 3467889999999999999999999875 56789999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 83 ~~~~L~~~~~~ 93 (260)
T cd05069 83 GKGSLLDFLKE 93 (260)
T ss_pred CCCCHHHHHhh
Confidence 99999999864
No 245
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.02 E-value=9.2e-10 Score=107.03 Aligned_cols=93 Identities=22% Similarity=0.333 Sum_probs=78.6
Q ss_pred hhhccccccCcccCCCCceEEEEEe--------CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI--------SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCS 500 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~ 500 (524)
...++|...+.||+|+||.||+|+. .++..+|+|.+.... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 4456788889999999999999973 123479999986533 34457789999999999 8999999999999
Q ss_pred cCCcceEEEcccCCCCHHHHHHh
Q 040301 501 NPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 501 ~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.....++||||+++|+|.+++++
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~ 114 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRA 114 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHh
Confidence 99999999999999999999864
No 246
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.02 E-value=1.7e-10 Score=96.66 Aligned_cols=86 Identities=19% Similarity=0.274 Sum_probs=73.1
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
.|...++||+|.||+|++|+- .+++.||+|+++... ++......+||-++++++|.|||++++....+..+-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 567778999999999999994 567889999986433 44456778999999999999999999999999999999999
Q ss_pred cCCCCHHHHH
Q 040301 512 LLNISITIIR 521 (524)
Q Consensus 512 ~~~gsL~~~l 521 (524)
|.. +|..|.
T Consensus 83 cdq-dlkkyf 91 (292)
T KOG0662|consen 83 CDQ-DLKKYF 91 (292)
T ss_pred hhH-HHHHHH
Confidence 985 666654
No 247
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.02 E-value=1e-09 Score=105.95 Aligned_cols=99 Identities=21% Similarity=0.274 Sum_probs=83.4
Q ss_pred ccchhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 040301 423 RTSYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCS 500 (524)
Q Consensus 423 ~~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~ 500 (524)
.+.+.++..++++|+..+.+|+|+||.||++.. .+++.+|+|.+..... ....+.+|+.+++++ +|||++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 356677778899999999999999999999996 5688999999865432 345677899999998 8999999999987
Q ss_pred cC-----CcceEEEcccCCCCHHHHHH
Q 040301 501 NP-----DFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 501 ~~-----~~~~lv~e~~~~gsL~~~l~ 522 (524)
.. +..++||||+++|+|.++++
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~ 116 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVK 116 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHH
Confidence 54 35899999999999999875
No 248
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.02 E-value=1e-09 Score=104.30 Aligned_cols=89 Identities=17% Similarity=0.160 Sum_probs=79.1
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+|+..+.||+|+||.||++... +++.+|+|.+.... ....+++.+|++++++++||||+++++++..+...++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5778889999999999999974 68899999997654 345677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++++|.+++++
T Consensus 82 ~~~~L~~~~~~ 92 (265)
T cd06605 82 DGGSLDKILKE 92 (265)
T ss_pred CCCcHHHHHHH
Confidence 99999999864
No 249
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.01 E-value=1.5e-09 Score=103.14 Aligned_cols=89 Identities=20% Similarity=0.286 Sum_probs=78.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch--HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE--RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
.|+..+.||+|+||.||+|.. .+++.+|+|.+..... ...+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 377788999999999999996 4678999999975443 3667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++++
T Consensus 81 ~~~~~L~~~~~~ 92 (264)
T cd06626 81 CSGGTLEELLEH 92 (264)
T ss_pred CCCCcHHHHHhh
Confidence 999999998854
No 250
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.01 E-value=2.6e-10 Score=123.28 Aligned_cols=128 Identities=26% Similarity=0.311 Sum_probs=74.6
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccc--cCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHh
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNN--LTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIG 97 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 97 (524)
...+.+.+-+|++. .++.... .++|++|-+.+|. +..+.. ..|..++.|.+|||++|.-.+.+|..++
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~--------~ff~~m~~LrVLDLs~~~~l~~LP~~I~ 592 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISG--------EFFRSLPLLRVLDLSGNSSLSKLPSSIG 592 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCH--------HHHhhCcceEEEECCCCCccCcCChHHh
Confidence 35566666666665 3333322 2356666666664 333321 3355666666777766666556666666
Q ss_pred cCcccccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccC
Q 040301 98 NFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYN 159 (524)
Q Consensus 98 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 159 (524)
++. +|+.|++++..+. .+|..+.+|..|.+|++..+......|.....+++|++|.+...
T Consensus 593 ~Li-~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 593 ELV-HLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred hhh-hhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 665 6666666666665 56666666666666666665544444555555666666665443
No 251
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.01 E-value=1.1e-09 Score=106.68 Aligned_cols=89 Identities=20% Similarity=0.293 Sum_probs=75.7
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|...+.||+|+||.||+|+.. +++.+|+|.++... ......+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888899999999999999964 67889999997543 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++ +|.+++.+
T Consensus 86 ~~~-~l~~~~~~ 96 (309)
T cd07872 86 LDK-DLKQYMDD 96 (309)
T ss_pred CCC-CHHHHHHh
Confidence 985 88887753
No 252
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.01 E-value=1.9e-09 Score=105.95 Aligned_cols=84 Identities=19% Similarity=0.248 Sum_probs=69.4
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHH-HHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECE-VLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||+||+|.. .+|+.+|+|++.... ......+.+|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3689999999999996 578999999997542 223445666665 46789999999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~l~~ 89 (325)
T cd05604 81 GELFFHLQR 89 (325)
T ss_pred CCHHHHHHH
Confidence 999988753
No 253
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.01 E-value=1.1e-09 Score=104.50 Aligned_cols=92 Identities=23% Similarity=0.304 Sum_probs=77.6
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcC------
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNP------ 502 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~------ 502 (524)
.+++.|+..+.+|+|+||.||+|.. .+++.+|+|.+..... ....+.+|+.+++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 4667899999999999999999996 4678899999875432 345788999999998 799999999998753
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
...|+||||+.+|+|.+++++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~ 102 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKN 102 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHh
Confidence 357999999999999998864
No 254
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.01 E-value=1.2e-09 Score=106.79 Aligned_cols=93 Identities=20% Similarity=0.311 Sum_probs=77.7
Q ss_pred hhhccccccCcccCCCCceEEEEEeC--------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEE
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTIS--------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCS 500 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~ 500 (524)
...++|...+.+|+|+||.||+++.. ....+|+|.+.... ......+.+|+++++++ +||||++++++|.
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 34467888999999999999999741 23468999887533 34456788999999999 6999999999999
Q ss_pred cCCcceEEEcccCCCCHHHHHHh
Q 040301 501 NPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 501 ~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.....++||||+++|+|.+++++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~ 111 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRA 111 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHh
Confidence 99999999999999999999864
No 255
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.01 E-value=1.7e-09 Score=103.03 Aligned_cols=88 Identities=25% Similarity=0.383 Sum_probs=75.4
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch---------HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE---------RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 505 (524)
|.....||+|+||.||+|.. .+++.+|+|.+..... ...+.+.+|+.++++++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 56778999999999999996 4678899998854321 1235688999999999999999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++++|.+++++
T Consensus 82 ~lv~e~~~~~~L~~~l~~ 99 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN 99 (267)
T ss_pred EEEEEecCCCCHHHHHHh
Confidence 999999999999999864
No 256
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.00 E-value=1.7e-09 Score=101.89 Aligned_cols=84 Identities=29% Similarity=0.448 Sum_probs=74.6
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeeccch-HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCHH
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISIT 518 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 518 (524)
+.+|+|+||.||++...+++.||+|.+..... .....+.+|+++++.++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36899999999999986689999999875443 35678999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 040301 519 IIRRH 523 (524)
Q Consensus 519 ~~l~~ 523 (524)
+++++
T Consensus 81 ~~l~~ 85 (251)
T cd05041 81 TFLRK 85 (251)
T ss_pred HHHHh
Confidence 99854
No 257
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.00 E-value=1.4e-09 Score=116.57 Aligned_cols=90 Identities=17% Similarity=0.212 Sum_probs=79.1
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999974 68899999996532 233567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 84 Ey~~g~~L~~li~~ 97 (669)
T cd05610 84 EYLIGGDVKSLLHI 97 (669)
T ss_pred eCCCCCCHHHHHHh
Confidence 99999999999863
No 258
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.00 E-value=1.4e-09 Score=106.69 Aligned_cols=89 Identities=21% Similarity=0.144 Sum_probs=74.2
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCcceEEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 509 (524)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+..|.+++..+. |++|+++++++.+.+..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 366778999999999999996 468899999997543 223456778999998885 577888999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 Ey~~~g~L~~~i~~ 94 (323)
T cd05615 81 EYVNGGDLMYHIQQ 94 (323)
T ss_pred cCCCCCcHHHHHHH
Confidence 99999999998864
No 259
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.00 E-value=9.8e-10 Score=103.91 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=77.1
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|...+.+|+|+||.||++.. .++..+|+|.+.... ....+.+.+|+.++++++|+||+++++++..++..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 367788999999999999997 457889999986532 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++.+
T Consensus 81 ~~~~~L~~~~~~ 92 (257)
T cd08225 81 CDGGDLMKRINR 92 (257)
T ss_pred CCCCcHHHHHHh
Confidence 999999998853
No 260
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.00 E-value=1.5e-09 Score=106.43 Aligned_cols=89 Identities=21% Similarity=0.145 Sum_probs=74.5
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 509 (524)
+|...+.||+|+||.||+|... +++.||+|.+.... ....+.+..|..++... +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778889999999999999964 57889999997543 22344567788888877 5899999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 E~~~~g~L~~~~~~ 94 (323)
T cd05616 81 EYVNGGDLMYQIQQ 94 (323)
T ss_pred cCCCCCCHHHHHHH
Confidence 99999999988853
No 261
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.00 E-value=1.6e-09 Score=102.92 Aligned_cols=84 Identities=14% Similarity=0.255 Sum_probs=71.0
Q ss_pred CcccCCCCceEEEEEeCC-------------CCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 440 NLLGTGSFGSVYKGTISD-------------WTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
+.||+|+||.||+|+... ...+|+|.+..........|.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998521 2248889886655555668889999999999999999999999999999
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+||||+++|+|..++++
T Consensus 81 lv~e~~~~~~l~~~~~~ 97 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR 97 (262)
T ss_pred EEEecccCCCHHHHHHh
Confidence 99999999999988753
No 262
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.00 E-value=1.4e-09 Score=105.49 Aligned_cols=89 Identities=21% Similarity=0.288 Sum_probs=76.1
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888999999999999999964 67889999986543 22345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
++ |+|.+++.+
T Consensus 86 ~~-~~l~~~l~~ 96 (301)
T cd07873 86 LD-KDLKQYLDD 96 (301)
T ss_pred cc-cCHHHHHHh
Confidence 97 599888753
No 263
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.00 E-value=1.9e-09 Score=103.79 Aligned_cols=88 Identities=18% Similarity=0.205 Sum_probs=77.3
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.+|+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 477888999999999999996 468899999997543 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+ +++|.+++++
T Consensus 81 ~-~~~L~~~~~~ 91 (286)
T cd07832 81 M-PSDLSEVLRD 91 (286)
T ss_pred c-CCCHHHHHHh
Confidence 9 9999998853
No 264
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.00 E-value=1.2e-09 Score=107.63 Aligned_cols=92 Identities=20% Similarity=0.306 Sum_probs=77.5
Q ss_pred hhccccccCcccCCCCceEEEEEeC--------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS--------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSN 501 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 501 (524)
....|++.+.||+|+||.||+|... .+..+|+|.+.... ....+++.+|+++++++ +||||++++++|..
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 3456888999999999999999741 12368999886533 34567899999999999 89999999999999
Q ss_pred CCcceEEEcccCCCCHHHHHHh
Q 040301 502 PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
++..++||||+++|+|.+++++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~ 111 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRA 111 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHh
Confidence 9999999999999999999864
No 265
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.00 E-value=1.4e-09 Score=103.74 Aligned_cols=89 Identities=17% Similarity=0.228 Sum_probs=74.6
Q ss_pred ccccccCcccCCCCceEEEEEeCC----CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISD----WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
.+|...+.+|+|+||.||+|...+ ...+|+|...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788899999999999998632 2468999886544 4456789999999999999999999998875 567899
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|||+++|+|.+++++
T Consensus 85 ~e~~~~~~L~~~l~~ 99 (270)
T cd05056 85 MELAPLGELRSYLQV 99 (270)
T ss_pred EEcCCCCcHHHHHHh
Confidence 999999999999864
No 266
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.00 E-value=1.5e-09 Score=105.11 Aligned_cols=90 Identities=28% Similarity=0.424 Sum_probs=76.3
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCC--EEEEEEeecc-chHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWT--NVAIKIFNLQ-LERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv 508 (524)
++|+..+.||+|+||.||+|... ++. .+|+|.++.. .....+.|.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 46888899999999999999864 333 4788888643 234557789999999999 799999999999999999999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
+||+++|+|.+++++
T Consensus 82 ~e~~~~~~L~~~l~~ 96 (297)
T cd05089 82 IEYAPYGNLLDFLRK 96 (297)
T ss_pred EEecCCCcHHHHHHh
Confidence 999999999999853
No 267
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.99 E-value=1.7e-09 Score=105.74 Aligned_cols=89 Identities=18% Similarity=0.248 Sum_probs=78.5
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccch---HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE---RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
+|+..+.||+|+||.||+|... +++.+|+|.+..... ...+.+.+|+++++.++||||+++++++......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 6788899999999999999974 588999999975432 245678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 82 ~~~~~~L~~~~~~ 94 (316)
T cd05574 82 YCPGGELFRLLQR 94 (316)
T ss_pred ecCCCCHHHHHHh
Confidence 9999999999863
No 268
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.99 E-value=1.8e-09 Score=103.55 Aligned_cols=92 Identities=20% Similarity=0.326 Sum_probs=78.0
Q ss_pred hhccccccCcccCCCCceEEEEEeCC-----CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEc-CCc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISD-----WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSN-PDF 504 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~~ 504 (524)
..++|...+.||+|+||.||+|.... +..||+|.+.... ....+.+.+|+.++++++||||+++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 34678888999999999999999744 5779999886543 3446778999999999999999999998876 577
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
.++++||+++|+|.+++++
T Consensus 84 ~~~~~~~~~~~~L~~~l~~ 102 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQ 102 (280)
T ss_pred CEEEEEcCCCCcHHHHHHh
Confidence 8999999999999999854
No 269
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.99 E-value=5.6e-10 Score=105.77 Aligned_cols=84 Identities=19% Similarity=0.280 Sum_probs=71.5
Q ss_pred CcccCCCCceEEEEEeC-C-------CCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 440 NLLGTGSFGSVYKGTIS-D-------WTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+.||+|+||.||+|... . ...+|+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36899999999999852 1 234888888655555567889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 81 ~~~g~L~~~l~~ 92 (258)
T cd05078 81 VKFGSLDTYLKK 92 (258)
T ss_pred CCCCcHHHHHhc
Confidence 999999999864
No 270
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.99 E-value=2.3e-09 Score=102.88 Aligned_cols=89 Identities=26% Similarity=0.393 Sum_probs=75.7
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCC----EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWT----NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.+|+..+.||+|+||.||+|... +|. .+|+|.+.... .....++.+|+.++++++||||+++++++.. +..++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999863 332 58999886543 3456788999999999999999999999987 78999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 86 v~e~~~~g~L~~~l~~ 101 (279)
T cd05057 86 ITQLMPLGCLLDYVRN 101 (279)
T ss_pred EEecCCCCcHHHHHHh
Confidence 9999999999999864
No 271
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.99 E-value=8.8e-10 Score=104.39 Aligned_cols=87 Identities=23% Similarity=0.328 Sum_probs=75.0
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchH--HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLER--AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
|+..+.||+|+||.||++... +++.+|+|.+...... ......+|+.++++++||||+++++++...+..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567789999999999999974 5668999999876532 2234466999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
++++|.+++.
T Consensus 81 ~~~~L~~~l~ 90 (260)
T PF00069_consen 81 PGGSLQDYLQ 90 (260)
T ss_dssp TTEBHHHHHH
T ss_pred cccccccccc
Confidence 9999999886
No 272
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.99 E-value=2.2e-09 Score=105.56 Aligned_cols=83 Identities=14% Similarity=0.172 Sum_probs=71.5
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.+|+|.+.... ....+.+.+|+.++.++ +||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3689999999999996 467889999997643 23345688999999888 699999999999999999999999999
Q ss_pred CCHHHHHH
Q 040301 515 ISITIIRR 522 (524)
Q Consensus 515 gsL~~~l~ 522 (524)
|+|.++++
T Consensus 81 ~~L~~~~~ 88 (327)
T cd05617 81 GDLMFHMQ 88 (327)
T ss_pred CcHHHHHH
Confidence 99998875
No 273
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.99 E-value=1.5e-09 Score=104.51 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=76.6
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
++|+....+|+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 35888899999999999999974 68899999986432 2234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|++++++..+++
T Consensus 81 ~~~~~~l~~~~~ 92 (286)
T cd07847 81 YCDHTVLNELEK 92 (286)
T ss_pred ccCccHHHHHHh
Confidence 999998887764
No 274
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.99 E-value=1.8e-09 Score=103.40 Aligned_cols=89 Identities=21% Similarity=0.316 Sum_probs=77.0
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCC---CCCccceeEEEEcCCcceEEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVC---HRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 509 (524)
.|+..+.+|+|+||.||+|.. .+++.+|+|.+.... ....+++.+|+.++++++ |||++++++++..++..++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999996 578899999986543 334567889999999986 999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++++|.+++++
T Consensus 82 e~~~~~~L~~~~~~ 95 (277)
T cd06917 82 EYAEGGSVRTLMKA 95 (277)
T ss_pred ecCCCCcHHHHHHc
Confidence 99999999998853
No 275
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.98 E-value=1.6e-09 Score=105.08 Aligned_cols=87 Identities=21% Similarity=0.276 Sum_probs=75.3
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch-----HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE-----RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|++++++++|+||+++++++.+++..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 67778999999999999996 4688999999975432 23456778999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+ +|+|.+++++
T Consensus 82 e~~-~~~L~~~i~~ 94 (298)
T cd07841 82 EFM-ETDLEKVIKD 94 (298)
T ss_pred ccc-CCCHHHHHhc
Confidence 999 8999999864
No 276
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.98 E-value=2.3e-09 Score=104.78 Aligned_cols=84 Identities=17% Similarity=0.182 Sum_probs=70.5
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.||+|.++... ....+.+..|.+++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 3689999999999997 468899999997643 22345567788888754 899999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 g~L~~~i~~ 89 (316)
T cd05620 81 GDLMFHIQD 89 (316)
T ss_pred CcHHHHHHH
Confidence 999988853
No 277
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.98 E-value=1.8e-09 Score=103.81 Aligned_cols=88 Identities=20% Similarity=0.296 Sum_probs=75.3
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.||+|++|.||+|+. .++..||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477888999999999999996 468899999986432 22346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
++ |+|.+++++
T Consensus 81 ~~-~~l~~~~~~ 91 (285)
T cd07861 81 LS-MDLKKYLDS 91 (285)
T ss_pred CC-CCHHHHHhc
Confidence 98 689888753
No 278
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.98 E-value=7.8e-10 Score=106.44 Aligned_cols=88 Identities=20% Similarity=0.262 Sum_probs=76.2
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 5788899999999999999974 58899999885432 22356788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
++++++.++.+
T Consensus 82 ~~~~~l~~~~~ 92 (286)
T cd07846 82 VDHTVLDDLEK 92 (286)
T ss_pred CCccHHHHHHh
Confidence 99999887764
No 279
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.98 E-value=2.4e-09 Score=101.17 Aligned_cols=87 Identities=25% Similarity=0.436 Sum_probs=75.8
Q ss_pred cccCcccCCCCceEEEEEeCC-----CCEEEEEEeeccchH-HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 437 NECNLLGTGSFGSVYKGTISD-----WTNVAIKIFNLQLER-AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 437 ~~~~~ig~g~~g~v~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
+..+.+|.|+||.||++...+ +..+|+|.+...... ..+.+.+|++++..++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456789999999999999643 378999999755432 56789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.++++.
T Consensus 82 ~~~~~~l~~~~~~ 94 (258)
T smart00219 82 YMEGGDLLDYLRK 94 (258)
T ss_pred ccCCCCHHHHHHh
Confidence 9999999999863
No 280
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.98 E-value=2.9e-09 Score=102.35 Aligned_cols=88 Identities=20% Similarity=0.280 Sum_probs=73.3
Q ss_pred ccccCcccCCCCceEEEEEe-----CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--CcceE
Q 040301 436 FNECNLLGTGSFGSVYKGTI-----SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKAL 507 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~l 507 (524)
|+..+.||+|+||+||.+.+ .++..||+|.+.... ......|.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 47788999999999988653 356789999997543 33456788999999999999999999998764 35899
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+++|+|.+++++
T Consensus 86 v~e~~~~~~l~~~~~~ 101 (283)
T cd05080 86 IMEYVPLGSLRDYLPK 101 (283)
T ss_pred EecCCCCCCHHHHHHH
Confidence 9999999999998753
No 281
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.98 E-value=1.3e-09 Score=107.45 Aligned_cols=94 Identities=19% Similarity=0.353 Sum_probs=76.7
Q ss_pred hhhhccccccCcccCCCCceEEEEEe------CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEc
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTI------SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSN 501 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 501 (524)
..+.+.|++.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+.++.++ +|+||++++++|..
T Consensus 3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 34456799999999999999999973 234689999987543 23446788999999999 89999999998865
Q ss_pred C-CcceEEEcccCCCCHHHHHHh
Q 040301 502 P-DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~-~~~~lv~e~~~~gsL~~~l~~ 523 (524)
. ..+++||||+++|+|.++++.
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~ 105 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRS 105 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHh
Confidence 4 568899999999999999853
No 282
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.97 E-value=1.3e-09 Score=112.34 Aligned_cols=99 Identities=21% Similarity=0.273 Sum_probs=82.8
Q ss_pred cchhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEc
Q 040301 424 TSYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSN 501 (524)
Q Consensus 424 ~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 501 (524)
..++.+...++-|++.+.+|.|.+|.||+++. ++++..|+|++....+ ..++...|.++++.. .|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 34566667788899999999999999999994 6788999999876543 335566788888876 79999999999865
Q ss_pred -----CCcceEEEcccCCCCHHHHHHh
Q 040301 502 -----PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 -----~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
++++|+|||||.+||..|+++.
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn 114 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKN 114 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhh
Confidence 5789999999999999999875
No 283
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.97 E-value=2.6e-09 Score=101.99 Aligned_cols=92 Identities=23% Similarity=0.287 Sum_probs=78.8
Q ss_pred hhhccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCC-----
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPD----- 503 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~----- 503 (524)
.++++|+..+.+|+|+||.||+|... +++.+|+|.+..... ..+++.+|+.+++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 46788999999999999999999974 578899999876543 346789999999999 7999999999997654
Q ss_pred -cceEEEcccCCCCHHHHHHh
Q 040301 504 -FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 -~~~lv~e~~~~gsL~~~l~~ 523 (524)
..++||||+++++|.+++++
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~ 102 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKG 102 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHH
Confidence 48999999999999998864
No 284
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.97 E-value=2.7e-09 Score=102.21 Aligned_cols=82 Identities=17% Similarity=0.171 Sum_probs=71.0
Q ss_pred ccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 442 LGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 442 ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
||+|+||.||+|.. .+|+.+|+|.+.... ....+.+.+|+++++.++||||+++++++...+..|+||||+++|+|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999986 468899999997533 22345677899999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
.+++.+
T Consensus 81 ~~~l~~ 86 (277)
T cd05577 81 KYHIYN 86 (277)
T ss_pred HHHHHH
Confidence 998854
No 285
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.97 E-value=1.8e-09 Score=102.13 Aligned_cols=82 Identities=18% Similarity=0.370 Sum_probs=68.9
Q ss_pred CcccCCCCceEEEEEeCC-C----------CEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 440 NLLGTGSFGSVYKGTISD-W----------TNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
+.||+|+||.||+|...+ + ..+++|.+...... ...|.+|+.+++.++||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 368999999999999743 3 24777877654332 6788999999999999999999999988 788999
Q ss_pred EcccCCCCHHHHHHh
Q 040301 509 WGRLLNISITIIRRH 523 (524)
Q Consensus 509 ~e~~~~gsL~~~l~~ 523 (524)
|||+++|+|.+++++
T Consensus 79 ~e~~~~~~L~~~l~~ 93 (259)
T cd05037 79 EEYVKFGPLDVFLHR 93 (259)
T ss_pred EEcCCCCcHHHHHHh
Confidence 999999999999864
No 286
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.97 E-value=1.7e-09 Score=104.36 Aligned_cols=89 Identities=22% Similarity=0.315 Sum_probs=76.0
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccch-HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
++|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|+++++.++||||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888899999999999999964 678999999865432 2234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+. |+|.+++.+
T Consensus 85 ~~-~~L~~~~~~ 95 (291)
T cd07844 85 LD-TDLKQYMDD 95 (291)
T ss_pred CC-CCHHHHHHh
Confidence 98 599988753
No 287
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.97 E-value=2.2e-09 Score=101.60 Aligned_cols=83 Identities=24% Similarity=0.249 Sum_probs=72.0
Q ss_pred CcccCCCCceEEEEEeC--CCC--EEEEEEeeccch-HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTIS--DWT--NVAIKIFNLQLE-RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|++|.||+|.+. +++ .+|+|.+..... ...+.+.+|++++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 36899999999999963 333 589999976554 567789999999999999999999999988 889999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 80 ~~L~~~l~~ 88 (257)
T cd05040 80 GSLLDRLRK 88 (257)
T ss_pred CcHHHHHHh
Confidence 999999864
No 288
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.97 E-value=3.2e-09 Score=101.31 Aligned_cols=87 Identities=24% Similarity=0.415 Sum_probs=72.4
Q ss_pred ccccCcccCCCCceEEEEEeC-C---CCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc-----
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-D---WTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF----- 504 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~---~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~----- 504 (524)
|...+.+|+|+||.||+|... + +..+|+|.++... ......+.+|++.+++++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999999863 2 3679999987533 3345679999999999999999999999876554
Q ss_pred -ceEEEcccCCCCHHHHHH
Q 040301 505 -KALMWGRLLNISITIIRR 522 (524)
Q Consensus 505 -~~lv~e~~~~gsL~~~l~ 522 (524)
.++|+||+++|+|.+++.
T Consensus 81 ~~~~v~e~~~~~~l~~~l~ 99 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLL 99 (273)
T ss_pred ccEEEEeccCCCCHHHHHH
Confidence 799999999999998873
No 289
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.97 E-value=1.5e-09 Score=105.12 Aligned_cols=90 Identities=19% Similarity=0.199 Sum_probs=77.4
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
..|+....||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~ 100 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL 100 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence 3455566899999999999996 468899999997654445567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++|+|.+++++
T Consensus 101 ~~~~L~~~~~~ 111 (297)
T cd06659 101 QGGALTDIVSQ 111 (297)
T ss_pred CCCCHHHHHhh
Confidence 99999988753
No 290
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.96 E-value=3.5e-09 Score=104.01 Aligned_cols=84 Identities=20% Similarity=0.241 Sum_probs=68.2
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHH-HHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECE-VLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|.. +++.++||||+++++++..++..|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 3689999999999996 467889999997533 122334445544 56789999999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~~~~ 89 (325)
T cd05602 81 GELFYHLQR 89 (325)
T ss_pred CcHHHHHHh
Confidence 999998853
No 291
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.96 E-value=2e-10 Score=101.40 Aligned_cols=94 Identities=15% Similarity=0.065 Sum_probs=82.9
Q ss_pred hhhhccccccCcccCCCCceEEEEE-eCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGT-ISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD----- 503 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~----- 503 (524)
......|.+.+.+|+|||+.||.++ ..++..||+|++.....++.+...+|++..++++|||++++++++..+.
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 3445679999999999999999999 5788899999998877778888999999999999999999999886544
Q ss_pred cceEEEcccCCCCHHHHHHh
Q 040301 504 FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~~ 523 (524)
+.||+++|...|||.+.+++
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~ 116 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIER 116 (302)
T ss_pred eEEEEeehhccccHHHHHHH
Confidence 48999999999999999865
No 292
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.96 E-value=2.4e-09 Score=102.91 Aligned_cols=99 Identities=20% Similarity=0.280 Sum_probs=83.2
Q ss_pred cchhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEc
Q 040301 424 TSYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSN 501 (524)
Q Consensus 424 ~~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~ 501 (524)
.++.++..+.+.|+..+.+|.|+||.||+|.. .+++.+|+|.+..... ...++..|+.++.++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 46677777888999999999999999999996 5678899999865432 345688899999998 79999999999853
Q ss_pred ------CCcceEEEcccCCCCHHHHHHh
Q 040301 502 ------PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ------~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.+..++||||+++|+|.++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 112 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKN 112 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHH
Confidence 4568999999999999998854
No 293
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.96 E-value=4.6e-09 Score=99.98 Aligned_cols=90 Identities=17% Similarity=0.270 Sum_probs=75.7
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-----hHHHHHHHHHHHHHhcCCCCCccceeEEEEc--CCcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-----ERAFRSFDSECEVLRNVCHRNLIKILSSCSN--PDFK 505 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~ 505 (524)
.+|+..+.+|+|+||.||+|.. .++..||+|.+.... .+..+.+.+|+.++++++||||+++++++.+ +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688889999999999999996 468899999886432 2334578899999999999999999999876 3568
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++++||+++++|.+++++
T Consensus 82 ~l~~e~~~~~~L~~~l~~ 99 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA 99 (266)
T ss_pred EEEEeCCCCCcHHHHHHH
Confidence 899999999999998853
No 294
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.96 E-value=2e-09 Score=111.46 Aligned_cols=95 Identities=18% Similarity=0.182 Sum_probs=78.8
Q ss_pred hhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC--
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD-- 503 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-- 503 (524)
.....++|...+.||+|+||.||+|.. .+++.||||.+.... ......+.+|+..+..++|+||+++++.+...+
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 344557899999999999999999985 578999999996543 345567889999999999999999998776533
Q ss_pred ------cceEEEcccCCCCHHHHHHh
Q 040301 504 ------FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 ------~~~lv~e~~~~gsL~~~l~~ 523 (524)
..++||||+++|+|.+++++
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~ 132 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKS 132 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHH
Confidence 36899999999999998863
No 295
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.96 E-value=1.6e-09 Score=104.62 Aligned_cols=88 Identities=22% Similarity=0.190 Sum_probs=76.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.|.....||+|+||.||++.. .++..||||.+........+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 344456799999999999986 4688999999876555556778999999999999999999999999999999999999
Q ss_pred CCCHHHHHH
Q 040301 514 NISITIIRR 522 (524)
Q Consensus 514 ~gsL~~~l~ 522 (524)
+++|.++++
T Consensus 103 ~~~L~~~~~ 111 (292)
T cd06658 103 GGALTDIVT 111 (292)
T ss_pred CCcHHHHHh
Confidence 999999874
No 296
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.96 E-value=3.2e-09 Score=100.52 Aligned_cols=81 Identities=20% Similarity=0.336 Sum_probs=68.3
Q ss_pred cccCCCCceEEEEEeC---CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCC
Q 040301 441 LLGTGSFGSVYKGTIS---DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNIS 516 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 516 (524)
.||+|+||.||+|.+. ++..||+|.+.... ....+.|.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999852 34569999986543 334567999999999999999999999885 557899999999999
Q ss_pred HHHHHH
Q 040301 517 ITIIRR 522 (524)
Q Consensus 517 L~~~l~ 522 (524)
|.++++
T Consensus 81 L~~~l~ 86 (257)
T cd05115 81 LNKFLS 86 (257)
T ss_pred HHHHHH
Confidence 999985
No 297
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.96 E-value=2.9e-09 Score=100.82 Aligned_cols=84 Identities=26% Similarity=0.450 Sum_probs=74.0
Q ss_pred CcccCCCCceEEEEEeCC----CCEEEEEEeeccchH-HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTISD----WTNVAIKIFNLQLER-AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.... +..+|+|.+...... ..+.+.+|++.++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 468999999999999643 778999999765432 367889999999999999999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~l~~ 89 (262)
T cd00192 81 GDLLDYLRK 89 (262)
T ss_pred CcHHHHHhh
Confidence 999999875
No 298
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.96 E-value=3e-09 Score=102.66 Aligned_cols=89 Identities=16% Similarity=0.188 Sum_probs=76.2
Q ss_pred cccccCcccCCCCceEEEEEe----CCCCEEEEEEeeccc----hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI----SDWTNVAIKIFNLQL----ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 505 (524)
+|+..+.||+|+||.||.+.. .+|..||+|.+.... ....+.+.+|+.+++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477788999999999999985 368899999997533 22346788999999999 699999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||+++|+|.+++++
T Consensus 81 ~lv~e~~~~~~L~~~l~~ 98 (290)
T cd05613 81 HLILDYINGGELFTHLSQ 98 (290)
T ss_pred EEEEecCCCCcHHHHHHH
Confidence 999999999999999853
No 299
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.95 E-value=2.3e-09 Score=105.93 Aligned_cols=88 Identities=18% Similarity=0.224 Sum_probs=72.5
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----cce
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD-----FKA 506 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~~ 506 (524)
.|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++.... ..|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 377788999999999999996 468899999986432 234457889999999999999999999886532 479
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+|||||. ++|.+++++
T Consensus 81 lv~e~~~-~~L~~~l~~ 96 (338)
T cd07859 81 VVFELME-SDLHQVIKA 96 (338)
T ss_pred EEEecCC-CCHHHHHHh
Confidence 9999996 699988753
No 300
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.95 E-value=3.9e-09 Score=100.14 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=75.1
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEc--CCcceEEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSN--PDFKALMW 509 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 509 (524)
+|+..+.+|.|+||.||++.. .+++.+|+|.+.... ....+++.+|++++++++||||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477888999999999999996 567889999986432 3445678899999999999999999998864 34679999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 81 e~~~~~~L~~~l~~ 94 (265)
T cd08217 81 EYCEGGDLAQLIQK 94 (265)
T ss_pred hhccCCCHHHHHHH
Confidence 99999999999853
No 301
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.95 E-value=3.9e-09 Score=100.68 Aligned_cols=84 Identities=29% Similarity=0.432 Sum_probs=71.0
Q ss_pred CcccCCCCceEEEEEeC-CCC--EEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTIS-DWT--NVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.+|+|+||.||+|... ++. .+|+|.+.... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999974 443 46888886433 34556789999999999 899999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 ~~L~~~i~~ 89 (270)
T cd05047 81 GNLLDFLRK 89 (270)
T ss_pred CcHHHHHHh
Confidence 999999863
No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.95 E-value=4.1e-09 Score=100.04 Aligned_cols=82 Identities=21% Similarity=0.255 Sum_probs=72.3
Q ss_pred ccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 442 LGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 442 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
||.|+||.||+|... +++.+|+|.+.... ....+.+.+|+.+++.++||||+++++++.++...++|+||+++|+|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999974 57899999997543 23456799999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
.+++++
T Consensus 81 ~~~l~~ 86 (262)
T cd05572 81 WTILRD 86 (262)
T ss_pred HHHHhh
Confidence 999864
No 303
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.94 E-value=2.8e-09 Score=102.43 Aligned_cols=88 Identities=19% Similarity=0.319 Sum_probs=75.3
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+|+..+.||+|++|.||+|+. .+|+.||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 478889999999999999997 468889999997543 223456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++ +|.++++.
T Consensus 81 ~~-~l~~~~~~ 90 (284)
T cd07836 81 DK-DLKKYMDT 90 (284)
T ss_pred Cc-cHHHHHHh
Confidence 84 88888753
No 304
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.94 E-value=4.6e-09 Score=99.40 Aligned_cols=82 Identities=20% Similarity=0.279 Sum_probs=69.2
Q ss_pred cccCCCCceEEEEEe---CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCC
Q 040301 441 LLGTGSFGSVYKGTI---SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 515 (524)
.||+|+||.||+|.+ .++..+|+|.++... ....+++.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999975 356789999986433 334678999999999999999999999885 55779999999999
Q ss_pred CHHHHHHh
Q 040301 516 SITIIRRH 523 (524)
Q Consensus 516 sL~~~l~~ 523 (524)
+|.+++++
T Consensus 81 ~L~~~l~~ 88 (257)
T cd05116 81 PLNKFLQK 88 (257)
T ss_pred cHHHHHHh
Confidence 99999853
No 305
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.94 E-value=3.3e-09 Score=101.88 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=72.9
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHH-HhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEV-LRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~-l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
++|+..+.||+|+||.||++.. .+|+.||+|+++... .....++..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 3688889999999999999997 468999999997543 2234456667765 566799999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|++ |+|.+++++
T Consensus 81 ~~~-~~l~~~l~~ 92 (283)
T cd06617 81 VMD-TSLDKFYKK 92 (283)
T ss_pred hhc-ccHHHHHHH
Confidence 997 688888753
No 306
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.94 E-value=3.1e-09 Score=102.66 Aligned_cols=85 Identities=24% Similarity=0.211 Sum_probs=74.8
Q ss_pred ccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCC
Q 040301 438 ECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNIS 516 (524)
Q Consensus 438 ~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 516 (524)
....||+|+||.||++.. .++..+|+|.+..........+.+|+.+++.++|+||+++++++..++..++||||+++++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 345799999999999986 5788999999865444456678999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q 040301 517 ITIIRR 522 (524)
Q Consensus 517 L~~~l~ 522 (524)
|.+++.
T Consensus 104 L~~~~~ 109 (292)
T cd06657 104 LTDIVT 109 (292)
T ss_pred HHHHHh
Confidence 998874
No 307
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.93 E-value=4.7e-09 Score=100.04 Aligned_cols=88 Identities=19% Similarity=0.318 Sum_probs=73.7
Q ss_pred cccccCcccCCCCceEEEEEeCC--CCEEEEEEeeccc----------hHHHHHHHHHHHHHhc-CCCCCccceeEEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTISD--WTNVAIKIFNLQL----------ERAFRSFDSECEVLRN-VCHRNLIKILSSCSN 501 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~ 501 (524)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999743 6789999885321 2234567889988875 799999999999999
Q ss_pred CCcceEEEcccCCCCHHHHHH
Q 040301 502 PDFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~ 522 (524)
++..++||||+++++|.+++.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~ 101 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFN 101 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHH
Confidence 999999999999999998874
No 308
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.93 E-value=2.7e-09 Score=103.01 Aligned_cols=90 Identities=19% Similarity=0.287 Sum_probs=76.2
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
++.+|...+.||+|+||.||+|.. .++..||+|.+.... .+....+.+|+.+++.++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999999986 468899999986543 223346778999999999999999999999999999999
Q ss_pred cccCCCCHHHHHH
Q 040301 510 GRLLNISITIIRR 522 (524)
Q Consensus 510 e~~~~gsL~~~l~ 522 (524)
||+. +++.+++.
T Consensus 83 e~~~-~~l~~~~~ 94 (291)
T cd07870 83 EYMH-TDLAQYMI 94 (291)
T ss_pred eccc-CCHHHHHH
Confidence 9996 68877664
No 309
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.93 E-value=1.6e-09 Score=101.28 Aligned_cols=90 Identities=20% Similarity=0.301 Sum_probs=76.6
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch--HHHHHHHHHHHHHhcCCCCC-ccceeEEEEcCC-----
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE--RAFRSFDSECEVLRNVCHRN-LIKILSSCSNPD----- 503 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~n-iv~l~~~~~~~~----- 503 (524)
...|+..+.+|+|.||+||+|+. .+|+.||+|++....+ +...-..+|+.++++++|+| ||++++++.+..
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 45677888999999999999995 6789999999975432 23345679999999999999 999999999877
Q ss_pred -cceEEEcccCCCCHHHHHHh
Q 040301 504 -FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 -~~~lv~e~~~~gsL~~~l~~ 523 (524)
.+++||||++. +|.++++.
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~ 109 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDS 109 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHh
Confidence 78999999985 99999865
No 310
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.93 E-value=8e-10 Score=78.81 Aligned_cols=61 Identities=36% Similarity=0.473 Sum_probs=53.5
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCC
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPL 88 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l 88 (524)
++|+.|++++|+++...+..|.++++|++|++++|+++.++. ..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~--------~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPP--------DAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEET--------TTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCH--------HHHcCCCCCCEEeCcCCcC
Confidence 478999999999997777888999999999999999988765 7889999999999999875
No 311
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.93 E-value=3e-09 Score=106.55 Aligned_cols=87 Identities=20% Similarity=0.164 Sum_probs=73.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----cce
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD-----FKA 506 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~~ 506 (524)
+|+..+.||+|+||.||++.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999996 578999999986432 234567889999999999999999999998876 789
Q ss_pred EEEcccCCCCHHHHHH
Q 040301 507 LMWGRLLNISITIIRR 522 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~ 522 (524)
+|+||+. ++|.+++.
T Consensus 81 lv~e~~~-~~l~~~~~ 95 (372)
T cd07853 81 VVTELMQ-SDLHKIIV 95 (372)
T ss_pred EEeeccc-cCHHHHHh
Confidence 9999997 58887764
No 312
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.92 E-value=6.5e-09 Score=98.79 Aligned_cols=90 Identities=19% Similarity=0.296 Sum_probs=75.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-----hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--Ccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-----ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFK 505 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 505 (524)
.+|...+.+|+|+||.||+|.. .++..+|+|.+.... .+....+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999996 468899999885321 23456788999999999999999999998764 458
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++|+||+++++|.++++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~ 99 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA 99 (264)
T ss_pred EEEEEeCCCCcHHHHHHH
Confidence 899999999999998853
No 313
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=7.5e-10 Score=110.91 Aligned_cols=83 Identities=23% Similarity=0.394 Sum_probs=76.0
Q ss_pred cccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCHHH
Q 040301 441 LLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISITI 519 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 519 (524)
++|+|.||+||.|+. .+...+|||.++....+..+-...||...++++|.|||+++|+|.+++.+-|.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 689999999999995 5667799999988776677788899999999999999999999999999999999999999999
Q ss_pred HHHh
Q 040301 520 IRRH 523 (524)
Q Consensus 520 ~l~~ 523 (524)
+||.
T Consensus 662 LLrs 665 (1226)
T KOG4279|consen 662 LLRS 665 (1226)
T ss_pred HHHh
Confidence 9975
No 314
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.92 E-value=4.1e-09 Score=103.05 Aligned_cols=87 Identities=17% Similarity=0.159 Sum_probs=68.7
Q ss_pred hhhhccccccCcccCCCCceEEEEEeC--CCCEEEEEEeecc-----chHHHHHHHHHHHHHhcCCCCCccceeEEEEcC
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTIS--DWTNVAIKIFNLQ-----LERAFRSFDSECEVLRNVCHRNLIKILSSCSNP 502 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~ 502 (524)
....++|...+.||+|+||+||+|... +++.+|||++... .....+.|.+|++++++++|+|++..+.. .
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~ 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---T 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---c
Confidence 345577999999999999999999863 5777899987532 12235679999999999999999953322 2
Q ss_pred CcceEEEcccCCCCHHH
Q 040301 503 DFKALMWGRLLNISITI 519 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~ 519 (524)
+..|+||||++|++|..
T Consensus 91 ~~~~LVmE~~~G~~L~~ 107 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHL 107 (365)
T ss_pred CCcEEEEEccCCCCHHH
Confidence 46899999999999973
No 315
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.92 E-value=7.2e-09 Score=97.68 Aligned_cols=89 Identities=30% Similarity=0.409 Sum_probs=78.3
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccch--HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE--RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.+|+|++|.||++... +++.+|+|.+..... ...+.+.+|++++++++|||++++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 3677889999999999999864 678899999976543 4567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++.+
T Consensus 81 ~~~~~L~~~~~~ 92 (254)
T cd06627 81 AENGSLRQIIKK 92 (254)
T ss_pred CCCCcHHHHHHh
Confidence 999999998854
No 316
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.92 E-value=3.6e-09 Score=101.67 Aligned_cols=89 Identities=19% Similarity=0.252 Sum_probs=76.0
Q ss_pred ccccccCcccCCCCceEEEEEeC------CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS------DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
.+|...+.+|+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 35777889999999999999852 24679999997543 233567889999999999999999999999999999
Q ss_pred EEEcccCCCCHHHHHH
Q 040301 507 LMWGRLLNISITIIRR 522 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~ 522 (524)
+++||+++++|.+++.
T Consensus 85 ~~~e~~~~~~l~~~l~ 100 (283)
T cd05091 85 MIFSYCSHSDLHEFLV 100 (283)
T ss_pred EEEEcCCCCcHHHHHH
Confidence 9999999999999974
No 317
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.92 E-value=7e-09 Score=99.82 Aligned_cols=89 Identities=25% Similarity=0.221 Sum_probs=77.6
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.|...+.||+|++|.||++.. .+++.+|+|.+........+.+.+|+.+++.++||||+++++++..++..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 455667999999999999996 4678899999875544455678899999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+++|.+++++
T Consensus 100 ~~~L~~~~~~ 109 (285)
T cd06648 100 GGALTDIVTH 109 (285)
T ss_pred CCCHHHHHHh
Confidence 9999998753
No 318
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.92 E-value=2.3e-09 Score=102.78 Aligned_cols=89 Identities=22% Similarity=0.284 Sum_probs=78.1
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCcceEEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 509 (524)
+|...+.||+|+||.||+|.. .++..+|+|.+.... ....+.+.+|++++++++ ||||+++++++..++..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 688889999999999999996 468899999986532 233567889999999998 999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++|+|.+++++
T Consensus 82 e~~~~~~L~~~l~~ 95 (280)
T cd05581 82 EYAPNGELLQYIRK 95 (280)
T ss_pred cCCCCCcHHHHHHH
Confidence 99999999999864
No 319
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.91 E-value=3.8e-09 Score=99.76 Aligned_cols=86 Identities=20% Similarity=0.335 Sum_probs=74.1
Q ss_pred ccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.+|+..+.+|+|+||.||++.. +++.+|+|.++... ..+.+.+|+.++++++||||+++++++..+ ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 5688899999999999999875 66789999986543 346788999999999999999999998654 5799999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.++++.
T Consensus 82 ~~~L~~~l~~ 91 (254)
T cd05083 82 KGNLVNFLRT 91 (254)
T ss_pred CCCHHHHHHh
Confidence 9999999864
No 320
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.91 E-value=2.3e-09 Score=102.20 Aligned_cols=84 Identities=27% Similarity=0.461 Sum_probs=71.5
Q ss_pred CcccCCCCceEEEEEeCC-------CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 440 NLLGTGSFGSVYKGTISD-------WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+.+|+|+||.||+|+..+ +..+|+|.+.... .....++.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998632 2568999886543 23466789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 81 ~~~~~L~~~l~~ 92 (269)
T cd05044 81 MEGGDLLSYLRD 92 (269)
T ss_pred cCCCcHHHHHHH
Confidence 999999999863
No 321
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.91 E-value=6.8e-09 Score=98.00 Aligned_cols=89 Identities=20% Similarity=0.245 Sum_probs=78.5
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|...+.+|+|+||.||++... ++..+|+|++.... ....+.+.+|++++++++|||++++.+++..++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4777889999999999999974 68899999997543 34567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++++
T Consensus 81 ~~~~~L~~~l~~ 92 (258)
T cd08215 81 ADGGDLSQKIKK 92 (258)
T ss_pred cCCCcHHHHHHH
Confidence 999999998864
No 322
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.91 E-value=7.8e-09 Score=97.18 Aligned_cols=89 Identities=24% Similarity=0.295 Sum_probs=79.4
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
+|+..+.+|+|++|.||++... ++..+++|++........+.+.+|++.++.++|++++++++++..+...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4777889999999999999974 688899999976654466789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+++|.+++.+
T Consensus 81 ~~~L~~~~~~ 90 (253)
T cd05122 81 GGSLKDLLKS 90 (253)
T ss_pred CCcHHHHHhh
Confidence 9999998854
No 323
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.91 E-value=6.1e-09 Score=98.46 Aligned_cols=89 Identities=19% Similarity=0.243 Sum_probs=74.9
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC-CcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP-DFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-~~~~lv~e 510 (524)
+|+..+.+|+|++|.||++.. .+++.+|+|.+.... ....+.+.+|++++++++|+|++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 478889999999999999996 457889999996432 33456788999999999999999999988644 46799999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++|+|.+++++
T Consensus 81 ~~~~~~l~~~l~~ 93 (257)
T cd08223 81 FCEGGDLYHKLKE 93 (257)
T ss_pred ccCCCcHHHHHHH
Confidence 9999999998864
No 324
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.90 E-value=1e-09 Score=118.77 Aligned_cols=275 Identities=21% Similarity=0.216 Sum_probs=179.4
Q ss_pred cccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCC--CCCCCChhHhcCcccccEEEeccCcccccC
Q 040301 40 FGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNP--LGGILPPVIGNFSASFQNFYAFNCKLKGNI 117 (524)
Q Consensus 40 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 117 (524)
..+....+...+-+|.+..+.. -.+.+.|.+|-+.+|. +....+..|..++ .|..|||++|.-.+.+
T Consensus 519 ~~~~~~~rr~s~~~~~~~~~~~----------~~~~~~L~tLll~~n~~~l~~is~~ff~~m~-~LrVLDLs~~~~l~~L 587 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIEHIAG----------SSENPKLRTLLLQRNSDWLLEISGEFFRSLP-LLRVLDLSGNSSLSKL 587 (889)
T ss_pred ccchhheeEEEEeccchhhccC----------CCCCCccceEEEeecchhhhhcCHHHHhhCc-ceEEEECCCCCccCcC
Confidence 3445678888998888876642 2233579999999996 5545555677787 9999999998887899
Q ss_pred CccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcc--cccCCccccC
Q 040301 118 PQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKL--SGHIPPCLAS 195 (524)
Q Consensus 118 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l--~~~~~~~~~~ 195 (524)
|..+++|.+|++|++++..+. .+|..+.++.+|.+|++..+.....+|.....+++|++|.+..... ....-..+..
T Consensus 588 P~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~ 666 (889)
T KOG4658|consen 588 PSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELEN 666 (889)
T ss_pred ChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhc
Confidence 999999999999999999998 7889999999999999999987767778888899999999876542 2222233455
Q ss_pred CCCCCEEEccCCcCCCccChhccCCCCCC----EEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCcccc-cccc-----
Q 040301 196 LTSLRELHLGSNKLTSSIPSSLWSLEYIL----MINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDI-STIG----- 265 (524)
Q Consensus 196 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~----- 265 (524)
+.+|+.+....... .+-..+..+.+|. .+.+.++... ..+..+..+.+|+.|.+.++.+.+.. ....
T Consensus 667 Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~ 743 (889)
T KOG4658|consen 667 LEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVL 743 (889)
T ss_pred ccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchh
Confidence 66666666543332 1111122222222 3333333322 34556778888899888888775432 1111
Q ss_pred c-cCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCCcccccCCCCCCeEEccCCcCcc
Q 040301 266 A-LVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSHLKQFNASHNRLEG 330 (524)
Q Consensus 266 ~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 330 (524)
. ++++..+...++... ..+.+....++|+.|++..+.....+......+..++.+-+..+.+.+
T Consensus 744 ~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 744 LCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred hhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccccc
Confidence 1 223333333333222 223333456788888888887765665555555556554444444443
No 325
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.90 E-value=3.1e-09 Score=103.33 Aligned_cols=82 Identities=21% Similarity=0.372 Sum_probs=71.9
Q ss_pred cCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCC
Q 040301 439 CNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 515 (524)
.+.+|+|.||+||.|.. ++|+.||||.+++.. .++..+..+|+.+|..+.||.||.+.--|.+.+.+++|||-+. |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 57899999999999996 679999999997654 3455788999999999999999999999999999999999886 5
Q ss_pred CHHHHH
Q 040301 516 SITIIR 521 (524)
Q Consensus 516 sL~~~l 521 (524)
+..+.|
T Consensus 648 DMLEMI 653 (888)
T KOG4236|consen 648 DMLEMI 653 (888)
T ss_pred hHHHHH
Confidence 766655
No 326
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.90 E-value=5.7e-09 Score=98.70 Aligned_cols=88 Identities=22% Similarity=0.279 Sum_probs=74.8
Q ss_pred hccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEE-cCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCS-NPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~-~~~~~~lv~e~ 511 (524)
..+|+..+.+|+|+||.||++... +..+|+|.+.... ..+.|.+|+.++++++|+|++++++++. +++..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 357888899999999999999864 6789999886433 3467889999999999999999999765 45678999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++|+|.+++++
T Consensus 82 ~~~~~L~~~~~~ 93 (256)
T cd05082 82 MAKGSLVDYLRS 93 (256)
T ss_pred CCCCcHHHHHHh
Confidence 999999999864
No 327
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.90 E-value=7.8e-09 Score=97.63 Aligned_cols=89 Identities=24% Similarity=0.360 Sum_probs=78.1
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--CcceEEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKALMW 509 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 509 (524)
+|...+.||+|++|.||+|... +++.+++|.+.... ....+.+.+|+.++++++||||+++++++... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999975 68899999997544 24567889999999999999999999999988 8899999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||+++++|.+++.+
T Consensus 81 e~~~~~~L~~~~~~ 94 (260)
T cd06606 81 EYVSGGSLSSLLKK 94 (260)
T ss_pred EecCCCcHHHHHHH
Confidence 99999999998864
No 328
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.90 E-value=7.7e-09 Score=99.19 Aligned_cols=89 Identities=24% Similarity=0.308 Sum_probs=71.9
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCC----EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWT----NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.+|+..+.||+|+||.||+|.+ .+++ .+|+|.+.... .....++..|+..+++++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 4678889999999999999996 3444 47778775432 233467888888999999999999999875 456789
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|+||+++|+|.+++++
T Consensus 86 i~e~~~~gsL~~~l~~ 101 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ 101 (279)
T ss_pred EEEeCCCCcHHHHHHh
Confidence 9999999999999853
No 329
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.90 E-value=3.4e-09 Score=101.94 Aligned_cols=87 Identities=23% Similarity=0.324 Sum_probs=74.6
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.||+|++|.||+|.. .+++.||||.+.... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 477888999999999999996 468899999886433 22345788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
+. ++|.++++
T Consensus 81 ~~-~~l~~~~~ 90 (284)
T cd07860 81 LH-QDLKKFMD 90 (284)
T ss_pred cc-cCHHHHHH
Confidence 96 68888774
No 330
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.89 E-value=6.4e-09 Score=101.29 Aligned_cols=89 Identities=24% Similarity=0.229 Sum_probs=75.5
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
...|+..+.+|+|+||.||+|.. .+++.||+|.+.... ....+++.+|+++++.++||||+++.++|..++..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 34588889999999999999996 468899999986432 33456788999999999999999999999999999999
Q ss_pred EcccCCCCHHHHHH
Q 040301 509 WGRLLNISITIIRR 522 (524)
Q Consensus 509 ~e~~~~gsL~~~l~ 522 (524)
|||++ |++.+++.
T Consensus 94 ~e~~~-g~l~~~~~ 106 (307)
T cd06607 94 MEYCL-GSASDILE 106 (307)
T ss_pred HHhhC-CCHHHHHH
Confidence 99997 57777653
No 331
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=3.4e-10 Score=119.33 Aligned_cols=98 Identities=14% Similarity=0.185 Sum_probs=84.7
Q ss_pred hhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 040301 426 YLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSN 501 (524)
Q Consensus 426 ~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~ 501 (524)
..++.-..++|.+.++||+|+||.|..+++ .+++.||+|++.+.. .....-|..|-.+|..-+.+=||++..+|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 355556678999999999999999999997 467889999997643 2345668889999999999999999999999
Q ss_pred CCcceEEEcccCCCCHHHHHHh
Q 040301 502 PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 ~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+.++|+|||||+||+|..+|-+
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk 168 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSK 168 (1317)
T ss_pred ccceEEEEecccCchHHHHHhh
Confidence 9999999999999999988865
No 332
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=2.5e-09 Score=107.61 Aligned_cols=89 Identities=19% Similarity=0.241 Sum_probs=75.4
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcce
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~ 506 (524)
..++|...+++|+|+||+|+.+.. .+++.+|||.+++.. ....+....|.+|+... +||.+++++.+|++.+.+|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 446788999999999999999997 467899999998754 33456677888888766 5999999999999999999
Q ss_pred EEEcccCCCCHHHH
Q 040301 507 LMWGRLLNISITII 520 (524)
Q Consensus 507 lv~e~~~~gsL~~~ 520 (524)
.||||+.||++..+
T Consensus 446 fvmey~~Ggdm~~~ 459 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHH 459 (694)
T ss_pred EEEEecCCCcEEEE
Confidence 99999999995433
No 333
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.89 E-value=5e-11 Score=104.83 Aligned_cols=89 Identities=21% Similarity=0.346 Sum_probs=77.6
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
.+.|+..+.||+|.|+.||++.. ++|+.+|+|+++-.. ..+.++..+|+++=+.++|||||++...+.+....|||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 35688888999999999999985 688999999886433 335678899999999999999999999999999999999
Q ss_pred cccCCCCHHHHH
Q 040301 510 GRLLNISITIIR 521 (524)
Q Consensus 510 e~~~~gsL~~~l 521 (524)
|+|+||+|..-|
T Consensus 90 e~m~G~dl~~eI 101 (355)
T KOG0033|consen 90 DLVTGGELFEDI 101 (355)
T ss_pred ecccchHHHHHH
Confidence 999999997644
No 334
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.89 E-value=9.1e-09 Score=97.60 Aligned_cols=84 Identities=21% Similarity=0.370 Sum_probs=69.3
Q ss_pred CcccCCCCceEEEEEeC----CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEc-CCcceEEEcccC
Q 040301 440 NLLGTGSFGSVYKGTIS----DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSN-PDFKALMWGRLL 513 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~~~~lv~e~~~ 513 (524)
+.||+|+||.||+|... .+..+|+|.+.... ....+.+.+|+.+++.++||||+++++++.. +...++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999852 23569999986433 3456788899999999999999999998764 556899999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.+++++
T Consensus 81 ~~~L~~~~~~ 90 (262)
T cd05058 81 HGDLRNFIRS 90 (262)
T ss_pred CCCHHHHHHh
Confidence 9999999864
No 335
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.89 E-value=8.3e-09 Score=97.61 Aligned_cols=83 Identities=22% Similarity=0.295 Sum_probs=69.6
Q ss_pred CcccCCCCceEEEEEeC--C--CCEEEEEEeeccch-HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTIS--D--WTNVAIKIFNLQLE-RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.||+|+||.||+|.+. + +..+|+|.+..... ...+++.+|+.++++++||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 36899999999999852 2 26799999975543 35678999999999999999999999876 5568999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 80 ~~L~~~l~~ 88 (257)
T cd05060 80 GPLLKYLKK 88 (257)
T ss_pred CcHHHHHHh
Confidence 999999864
No 336
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.89 E-value=8.7e-09 Score=101.35 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=71.9
Q ss_pred CcccCC--CCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTG--SFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g--~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
..||+| +||+||.+.. .+|+.||+|.+.... ....+.+.+|+.+++.++||||++++++|..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 8899999996 578999999986533 33456788999999999999999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|++.+++++
T Consensus 84 ~~l~~~l~~ 92 (328)
T cd08226 84 GSANSLLKT 92 (328)
T ss_pred CCHHHHHHh
Confidence 999999864
No 337
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.88 E-value=3.2e-09 Score=102.21 Aligned_cols=88 Identities=20% Similarity=0.294 Sum_probs=75.6
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5788899999999999999974 57889999986532 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
++++.+..+.+
T Consensus 82 ~~~~~l~~~~~ 92 (288)
T cd07833 82 VERTLLELLEA 92 (288)
T ss_pred CCCCHHHHHHh
Confidence 99877766554
No 338
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.88 E-value=5.4e-09 Score=102.78 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=78.8
Q ss_pred hhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEc-C
Q 040301 427 LDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSN-P 502 (524)
Q Consensus 427 ~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~ 502 (524)
.++...+++|+..+.||+|+||.||+|.. .+++.+|+|++.... ....+.+.+|++++++++||||+++.+++.. .
T Consensus 3 ~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 3 GTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred cceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 34556788899999999999999999985 478899999885422 2345678899999999999999999999876 5
Q ss_pred CcceEEEcccCCCCHHHHHH
Q 040301 503 DFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~ 522 (524)
...++|+||+ +++|.++++
T Consensus 83 ~~~~lv~e~~-~~~L~~~~~ 101 (328)
T cd07856 83 EDIYFVTELL-GTDLHRLLT 101 (328)
T ss_pred CcEEEEeehh-ccCHHHHHh
Confidence 6789999998 568988875
No 339
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.88 E-value=9.2e-09 Score=98.65 Aligned_cols=90 Identities=26% Similarity=0.356 Sum_probs=75.0
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCC----EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWT----NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
..+|+..+.||+|+||+||+|.+ .++. .||+|.+.... ....+++.+|+.+++.+.||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 35688889999999999999985 3444 48999986543 3446778999999999999999999999975 4578
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+++||+++|+|.+++++
T Consensus 85 l~~~~~~~g~l~~~l~~ 101 (279)
T cd05109 85 LVTQLMPYGCLLDYVRE 101 (279)
T ss_pred EEEEcCCCCCHHHHHhh
Confidence 99999999999999864
No 340
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.88 E-value=9.3e-09 Score=98.13 Aligned_cols=85 Identities=20% Similarity=0.379 Sum_probs=69.5
Q ss_pred cccCcccCCCCceEEEEEeCC-CC--EEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC------Ccc
Q 040301 437 NECNLLGTGSFGSVYKGTISD-WT--NVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP------DFK 505 (524)
Q Consensus 437 ~~~~~ig~g~~g~v~~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------~~~ 505 (524)
...+.||+|+||.||+|+..+ +. .+|+|.++... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999999743 33 58999886532 34567889999999999999999999987542 246
Q ss_pred eEEEcccCCCCHHHHH
Q 040301 506 ALMWGRLLNISITIIR 521 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l 521 (524)
++||||+++|+|.+++
T Consensus 82 ~~v~e~~~~~~l~~~~ 97 (272)
T cd05075 82 VVILPFMKHGDLHSFL 97 (272)
T ss_pred EEEEEeCCCCcHHHHH
Confidence 8999999999999887
No 341
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.87 E-value=8.7e-10 Score=104.92 Aligned_cols=90 Identities=21% Similarity=0.278 Sum_probs=73.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---h----HHHHHHHHHHHHHhcCCCCCccceeEEEEc-CCc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---E----RAFRSFDSECEVLRNVCHRNLIKILSSCSN-PDF 504 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~----~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~~ 504 (524)
+.|-....+|+|+|+.||+|.. ...+.||||+-.... + ...+...+|.++.+.++||.||++|+|+.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 4577788999999999999994 567889999764322 1 123456799999999999999999999964 578
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
+|-|+|||+|.+|.-||++
T Consensus 543 FCTVLEYceGNDLDFYLKQ 561 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQ 561 (775)
T ss_pred ceeeeeecCCCchhHHHHh
Confidence 9999999999999998864
No 342
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.87 E-value=5.8e-09 Score=98.49 Aligned_cols=89 Identities=24% Similarity=0.244 Sum_probs=77.6
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+|+..+.+|+|+||.||++.. .+++.+|+|.+.... ......+.+|+++++.++|+||+++.+++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477788999999999999985 467889999987543 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+++++|.+++++
T Consensus 81 ~~~~~L~~~~~~ 92 (256)
T cd08530 81 APFGDLSKAISK 92 (256)
T ss_pred cCCCCHHHHHHH
Confidence 999999998864
No 343
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.87 E-value=5.9e-09 Score=98.90 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=72.2
Q ss_pred ccCCCCceEEEEEeC-CCCEEEEEEeeccch---HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 442 LGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE---RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 442 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
+|+|+||.||++... +++.+|+|.+..... ...+.+.+|++++++++||||+++++++..+...|+||||+++|+|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999975 588999999965432 3456788999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
.+++++
T Consensus 81 ~~~l~~ 86 (265)
T cd05579 81 ASLLEN 86 (265)
T ss_pred HHHHHH
Confidence 998864
No 344
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.86 E-value=1.1e-08 Score=100.59 Aligned_cols=82 Identities=15% Similarity=0.131 Sum_probs=67.5
Q ss_pred ccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC---CCCCccceeEEEEcCCcceEEEcccCC
Q 040301 442 LGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV---CHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 442 ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
||+|+||.||+|+. .+++.||||++.... ......+..|..++... +||+|+++++++.+.+..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999996 468899999996532 12234456677777665 699999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 81 g~L~~~l~~ 89 (330)
T cd05586 81 GELFWHLQK 89 (330)
T ss_pred ChHHHHHHh
Confidence 999988754
No 345
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.86 E-value=7.8e-09 Score=99.97 Aligned_cols=88 Identities=19% Similarity=0.323 Sum_probs=75.0
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
++|+..+.||+|++|.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4688889999999999999996 468899999986432 2234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|++ +++.++++
T Consensus 82 ~~~-~~l~~~~~ 92 (294)
T PLN00009 82 YLD-LDLKKHMD 92 (294)
T ss_pred ccc-ccHHHHHH
Confidence 996 58887764
No 346
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.86 E-value=8.1e-09 Score=103.82 Aligned_cols=82 Identities=17% Similarity=0.220 Sum_probs=72.0
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.+|+..+.||+|+||.||+|.. .+++.||+|... .+.+.+|++++++++|||||++++++......++|+||+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 5699999999999999999996 568899999653 234678999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
. |+|.+++.
T Consensus 166 ~-~~L~~~l~ 174 (391)
T PHA03212 166 K-TDLYCYLA 174 (391)
T ss_pred C-CCHHHHHH
Confidence 6 68888875
No 347
>PRK10345 hypothetical protein; Provisional
Probab=98.86 E-value=1.1e-08 Score=92.59 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=67.1
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcC-----CCCCccceeEEEEcCC---c-c
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNV-----CHRNLIKILSSCSNPD---F-K 505 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-----~H~niv~l~~~~~~~~---~-~ 505 (524)
+.....||+|+||.||. .+ ++.. +||++........+++.+|+.+++.+ +||||++++|++.++. . +
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 34567899999999995 43 3444 79988765444567799999999999 6799999999999874 4 3
Q ss_pred eEEEcc--cCCCCHHHHHHh
Q 040301 506 ALMWGR--LLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~--~~~gsL~~~l~~ 523 (524)
.+|+|| +++|+|.+++++
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~ 100 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQ 100 (210)
T ss_pred EEEecCCCCcchhHHHHHHc
Confidence 489999 668999999864
No 348
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.85 E-value=8.4e-09 Score=99.40 Aligned_cols=88 Identities=17% Similarity=0.163 Sum_probs=74.9
Q ss_pred cccccCcccCCCCceEEEEEe----CCCCEEEEEEeeccc----hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI----SDWTNVAIKIFNLQL----ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 505 (524)
+|+..+.||+|+||.||+++. .+++.+|||.+.... ....+.+.+|+.++.++ +||||+++.+++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367778999999999999884 356789999987532 22346788999999999 699999999999999999
Q ss_pred eEEEcccCCCCHHHHHH
Q 040301 506 ALMWGRLLNISITIIRR 522 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~ 522 (524)
++||||+++|+|.+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~ 97 (288)
T cd05583 81 HLILDYVNGGELFTHLY 97 (288)
T ss_pred EEEEecCCCCcHHHHHh
Confidence 99999999999999875
No 349
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.84 E-value=3.4e-09 Score=98.88 Aligned_cols=92 Identities=18% Similarity=0.178 Sum_probs=76.3
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeecc--chHHHHHHHHHHHHHhcCCCCCccceeEEEEc-----C
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQ--LERAFRSFDSECEVLRNVCHRNLIKILSSCSN-----P 502 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-----~ 502 (524)
.....|...+.+|+|.||.|+.+.. .+|+.||+|++... ..-..++-.||+++++.++|+||+.++..+.. -
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 4455676678999999999999996 57899999999632 23456788899999999999999999999876 3
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
..+|+|+|+|+ -+|++.|+.
T Consensus 99 ~DvYiV~elMe-tDL~~iik~ 118 (359)
T KOG0660|consen 99 NDVYLVFELME-TDLHQIIKS 118 (359)
T ss_pred ceeEEehhHHh-hHHHHHHHc
Confidence 46899999996 499888863
No 350
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.84 E-value=1.4e-08 Score=98.76 Aligned_cols=90 Identities=28% Similarity=0.437 Sum_probs=73.3
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCC----EEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcce
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWT----NVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKA 506 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 506 (524)
..+|+..+.||+|+||.||+|.. .++. .+|+|.+.... .....++.+|+.++++++||||++++|+|... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 35677888999999999999985 3443 47888886543 33345788999999999999999999998754 578
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+|+||+++|+|.+++++
T Consensus 85 ~v~e~~~~g~l~~~~~~ 101 (303)
T cd05110 85 LVTQLMPHGCLLDYVHE 101 (303)
T ss_pred eeehhcCCCCHHHHHHh
Confidence 99999999999999853
No 351
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.84 E-value=1.5e-08 Score=97.76 Aligned_cols=88 Identities=23% Similarity=0.327 Sum_probs=68.7
Q ss_pred cccccCcccCCCCceEEEEEe-C-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcC---CCCCccceeEEEEc-----C
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-S-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNV---CHRNLIKILSSCSN-----P 502 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~-----~ 502 (524)
+|+..+.||+|+||.||+|.. . +++.+|+|.+.... ......+.+|+.+++.+ +||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 688889999999999999986 3 46789999986433 22334566777776655 79999999999863 3
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
...++||||++ |+|.+++++
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~ 101 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDK 101 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHh
Confidence 56899999997 699988753
No 352
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.84 E-value=1.3e-08 Score=100.66 Aligned_cols=92 Identities=18% Similarity=0.233 Sum_probs=75.8
Q ss_pred hhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC---
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD--- 503 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~--- 503 (524)
....+.|+..+.||+|+||.||++.. .++..||||++.... ....+.+.+|+.++++++||||+++++++..+.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 34567899999999999999999985 578899999985432 333556889999999999999999999987654
Q ss_pred ---cceEEEcccCCCCHHHHHH
Q 040301 504 ---FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 504 ---~~~lv~e~~~~gsL~~~l~ 522 (524)
..++||||+ +++|.++++
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~ 111 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMK 111 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHh
Confidence 358999999 679988774
No 353
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.83 E-value=1.2e-08 Score=98.68 Aligned_cols=90 Identities=18% Similarity=0.240 Sum_probs=75.4
Q ss_pred hccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccch--HHHHHHHHHHHHHhcCCCCCccceeEEEEcC--CcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE--RAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~l 507 (524)
.++|+..+.||+|+||.||+|... +++.+|+|.++.... .....+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 357888999999999999999974 578899999975432 2234577899999999999999999999877 88999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
||||+. ++|.+++..
T Consensus 84 v~e~~~-~~L~~~~~~ 98 (293)
T cd07843 84 VMEYVE-HDLKSLMET 98 (293)
T ss_pred EehhcC-cCHHHHHHh
Confidence 999998 599888753
No 354
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.83 E-value=1.1e-08 Score=98.21 Aligned_cols=87 Identities=21% Similarity=0.316 Sum_probs=74.4
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
|+..+.+|+|++|.||+|.. .+|..||+|++.... ....+.+.+|++++++++|||++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 56678899999999999996 478999999986543 223456889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
+ ++|.+++.+
T Consensus 81 ~-~~l~~~~~~ 90 (283)
T cd07835 81 D-LDLKKYMDS 90 (283)
T ss_pred C-cCHHHHHhh
Confidence 5 699998854
No 355
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.82 E-value=1.1e-08 Score=104.59 Aligned_cols=86 Identities=21% Similarity=0.293 Sum_probs=69.1
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--------
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNP-------- 502 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-------- 502 (524)
...+|+..+.||+|+||.||+|.. .+++.||||++.... ....+|+.+++.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 345799999999999999999996 568899999885432 2234799999999999999999987432
Q ss_pred CcceEEEcccCCCCHHHHHH
Q 040301 503 DFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~ 522 (524)
..+++||||+++ ++.++++
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~ 158 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMK 158 (440)
T ss_pred eEEEEEEecCCc-cHHHHHH
Confidence 246799999984 7877764
No 356
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.82 E-value=1.4e-08 Score=99.31 Aligned_cols=87 Identities=22% Similarity=0.293 Sum_probs=72.9
Q ss_pred cccccCcccCCCCceEEEEEeC---CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--Ccce
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS---DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKA 506 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~ 506 (524)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677789999999999999963 57899999997632 33346678899999999999999999999988 7899
Q ss_pred EEEcccCCCCHHHHHH
Q 040301 507 LMWGRLLNISITIIRR 522 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~ 522 (524)
+||||+++ ++.+++.
T Consensus 81 lv~e~~~~-~l~~~~~ 95 (316)
T cd07842 81 LLFDYAEH-DLWQIIK 95 (316)
T ss_pred EEEeCCCc-CHHHHHH
Confidence 99999985 7777663
No 357
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.82 E-value=2e-08 Score=98.23 Aligned_cols=87 Identities=23% Similarity=0.230 Sum_probs=73.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
.|...+.+|+|+||.||++.. .++..+|+|.+.... ......+.+|++++++++|||++++++++..++..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 367788999999999999996 467889999986432 2345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|+. |++.+++.
T Consensus 106 ~~~-g~l~~~~~ 116 (317)
T cd06635 106 YCL-GSASDLLE 116 (317)
T ss_pred CCC-CCHHHHHH
Confidence 997 58877663
No 358
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.82 E-value=1.2e-08 Score=98.95 Aligned_cols=91 Identities=23% Similarity=0.326 Sum_probs=75.0
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC----
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD---- 503 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~---- 503 (524)
...++|+..+.+|+|+||.||+|.. .+++.||+|.++... ......+.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 3456899999999999999999997 468899999996533 223456788999999999999999999997755
Q ss_pred ------cceEEEcccCCCCHHHHHH
Q 040301 504 ------FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 504 ------~~~lv~e~~~~gsL~~~l~ 522 (524)
..++|+||+++ ++.+++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~ 107 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLE 107 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHh
Confidence 78999999986 7766654
No 359
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.81 E-value=3.8e-09 Score=75.28 Aligned_cols=59 Identities=32% Similarity=0.381 Sum_probs=28.9
Q ss_pred cccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCc
Q 040301 102 SFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNN 160 (524)
Q Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 160 (524)
+|+.|++++|++....+..|.++++|++|++++|.+..+.+.+|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34445555555544444444455555555555555544444444555555555554443
No 360
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.81 E-value=2.2e-08 Score=95.63 Aligned_cols=87 Identities=20% Similarity=0.376 Sum_probs=71.0
Q ss_pred ccccCcccCCCCceEEEEEeC----CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC------
Q 040301 436 FNECNLLGTGSFGSVYKGTIS----DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD------ 503 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~------ 503 (524)
|...+.||+|+||.||+|... +++.+|||.+.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556788999999999999852 36789999986542 344667899999999999999999999886542
Q ss_pred cceEEEcccCCCCHHHHHH
Q 040301 504 FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~ 522 (524)
..++++||+++|+|.+++.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~ 99 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLL 99 (273)
T ss_pred ceEEEEecCCCCcHHHHHH
Confidence 2478999999999988763
No 361
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.81 E-value=6.1e-09 Score=100.10 Aligned_cols=87 Identities=18% Similarity=0.267 Sum_probs=73.7
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
.|+..+.+|+|+||.||+|.. .+|+.+|+|.++... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 367778999999999999997 468899999996532 22235677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
++ |+|.++++
T Consensus 81 ~~-~~l~~~~~ 90 (284)
T cd07839 81 CD-QDLKKYFD 90 (284)
T ss_pred CC-CCHHHHHH
Confidence 97 58888775
No 362
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.81 E-value=4.5e-10 Score=112.08 Aligned_cols=90 Identities=22% Similarity=0.301 Sum_probs=79.2
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
..++|+....+|+|.||.||+++. ..+...|+|.++.....+.+-..+|+-+++.++|||||.++|.+...+..|+.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 456899999999999999999996 5688899999987655455666789999999999999999999999999999999
Q ss_pred ccCCCCHHHHH
Q 040301 511 RLLNISITIIR 521 (524)
Q Consensus 511 ~~~~gsL~~~l 521 (524)
||.+|+|.+..
T Consensus 93 ycgggslQdiy 103 (829)
T KOG0576|consen 93 YCGGGSLQDIY 103 (829)
T ss_pred ecCCCccccee
Confidence 99999998753
No 363
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.81 E-value=1.6e-08 Score=97.34 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=74.2
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC--CcceEEEc
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKALMWG 510 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 510 (524)
|+..+.+|+|+||.||+|... +++.+|+|.+.... ....+.+.+|+++++.++|||++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566788999999999999974 57889999997653 33456788999999999999999999999988 88999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+++ +|.+++.+
T Consensus 81 ~~~~-~l~~~~~~ 92 (287)
T cd07840 81 YMDH-DLTGLLDS 92 (287)
T ss_pred cccc-cHHHHHhc
Confidence 9984 88888753
No 364
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.80 E-value=1.7e-08 Score=100.63 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=73.0
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD----- 503 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~----- 503 (524)
..++|+..+.||+|+||.||++.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 446799999999999999999996 468899999996432 334567889999999999999999999987543
Q ss_pred -cceEEEcccCCCCHHHHH
Q 040301 504 -FKALMWGRLLNISITIIR 521 (524)
Q Consensus 504 -~~~lv~e~~~~gsL~~~l 521 (524)
..|+||||+++ ++.+.+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~ 116 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVI 116 (359)
T ss_pred ceeEEEEeCCCc-CHHHHH
Confidence 46999999985 566554
No 365
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.80 E-value=9.3e-09 Score=105.10 Aligned_cols=91 Identities=18% Similarity=0.275 Sum_probs=68.2
Q ss_pred hhccccccCcccCCCCceEEEEEe-----------------CCCCEEEEEEeeccchHHHHHH--------------HHH
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-----------------SDWTNVAIKIFNLQLERAFRSF--------------DSE 480 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~E 480 (524)
..++|+..++||+|+||.||+|.. ..++.||||++........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 2346799999865432223333 346
Q ss_pred HHHHhcCCCCCc-----cceeEEEEc--------CCcceEEEcccCCCCHHHHHH
Q 040301 481 CEVLRNVCHRNL-----IKILSSCSN--------PDFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 481 i~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~ 522 (524)
+.++.+++|.++ +++++||.. .+..|+||||+++|+|.++|+
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~ 277 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALD 277 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHh
Confidence 667777766654 677888753 356899999999999999986
No 366
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.80 E-value=1.3e-08 Score=100.69 Aligned_cols=93 Identities=18% Similarity=0.254 Sum_probs=75.7
Q ss_pred hhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC---
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP--- 502 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--- 502 (524)
.....+.|+..+.||+|+||.||+|.. .+++.||||.+.... ....+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 344567899999999999999999996 567889999996533 23345678999999999999999999988643
Q ss_pred ---CcceEEEcccCCCCHHHHHH
Q 040301 503 ---DFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 503 ---~~~~lv~e~~~~gsL~~~l~ 522 (524)
...|+++|++ +++|.++++
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~ 111 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVK 111 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHh
Confidence 3468999988 689988775
No 367
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.79 E-value=2.7e-08 Score=91.72 Aligned_cols=88 Identities=22% Similarity=0.290 Sum_probs=77.6
Q ss_pred ccccCcccCCCCceEEEEEeCC-CCEEEEEEeeccchH-HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 436 FNECNLLGTGSFGSVYKGTISD-WTNVAIKIFNLQLER-AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
|...+.+|+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566789999999999999754 788999999765544 56789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+++|.+++..
T Consensus 81 ~~~L~~~~~~ 90 (225)
T smart00221 81 GGDLFDYLRK 90 (225)
T ss_pred CCCHHHHHHh
Confidence 9999999854
No 368
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.79 E-value=1.8e-08 Score=99.43 Aligned_cols=89 Identities=18% Similarity=0.235 Sum_probs=72.4
Q ss_pred cccc-ccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHH--------------HHHHHHHHHHHhcCCCCCccceeE
Q 040301 434 DEFN-ECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERA--------------FRSFDSECEVLRNVCHRNLIKILS 497 (524)
Q Consensus 434 ~~~~-~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~Ei~~l~~l~H~niv~l~~ 497 (524)
+.|. ..+.||+|+||+||+|.. .+++.||+|.+....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 456799999999999996 468899999986432111 124779999999999999999999
Q ss_pred EEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 498 SCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 498 ~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
++..++..++||||++ |+|.++++.
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~ 112 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR 112 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh
Confidence 9999999999999997 699988753
No 369
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.79 E-value=1.2e-09 Score=99.60 Aligned_cols=88 Identities=24% Similarity=0.281 Sum_probs=73.8
Q ss_pred ccccccCcccCCCCceEEEEEe---CCCC--EEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEc-CCcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI---SDWT--NVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSN-PDFK 505 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~---~~~~--~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~-~~~~ 505 (524)
..|+....||+|.||.||+|.- ++.+ .+|+|+++... .+......+||..+++++|||++.+..++.+ +..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 4688889999999999999974 2223 69999997654 3345667899999999999999999999988 7789
Q ss_pred eEEEcccCCCCHHHHHH
Q 040301 506 ALMWGRLLNISITIIRR 522 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~ 522 (524)
++++||.|. +|.+.|+
T Consensus 104 ~l~fdYAEh-DL~~II~ 119 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIK 119 (438)
T ss_pred EEEehhhhh-hHHHHHH
Confidence 999999996 8888875
No 370
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.79 E-value=1.1e-08 Score=108.07 Aligned_cols=96 Identities=20% Similarity=0.337 Sum_probs=80.9
Q ss_pred hhhhhhccccccCcccCCCCceEEEEEe----CC----CCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeE
Q 040301 428 DIQRATDEFNECNLLGTGSFGSVYKGTI----SD----WTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILS 497 (524)
Q Consensus 428 ~l~~~~~~~~~~~~ig~g~~g~v~~~~~----~~----~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~ 497 (524)
.++...++....+.+|+|.||+|++|.. .. ...||||.++... ..+.+.+..|+++|+.+ .|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 4555555666677999999999999984 11 3469999997654 45678899999999999 5999999999
Q ss_pred EEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 498 SCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 498 ~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+|.+.++.++|+||++.|+|.+|+++
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~ 395 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRK 395 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHh
Confidence 99999999999999999999999986
No 371
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.78 E-value=1.8e-08 Score=97.46 Aligned_cols=88 Identities=19% Similarity=0.264 Sum_probs=72.9
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCc-----
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDF----- 504 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~----- 504 (524)
++|+..+.+|+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 3588889999999999999996 468899999886533 223457889999999995 6999999999987665
Q ss_pred ceEEEcccCCCCHHHHHH
Q 040301 505 KALMWGRLLNISITIIRR 522 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~ 522 (524)
.|+||||+++ +|.+++.
T Consensus 81 ~~lv~e~~~~-~l~~~~~ 97 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMD 97 (295)
T ss_pred EEEEeeccCc-CHHHHHH
Confidence 8999999985 8988874
No 372
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.78 E-value=2e-09 Score=97.56 Aligned_cols=208 Identities=18% Similarity=0.169 Sum_probs=125.9
Q ss_pred CCCCEEEccCCCCCCCCC-hhHhcCcccccEEEeccCcccc--cCCccccCCCCCCeEEcccCcCcccCCccccCCCCCC
Q 040301 76 RHLKALSLGSNPLGGILP-PVIGNFSASFQNFYAFNCKLKG--NIPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLR 152 (524)
Q Consensus 76 ~~L~~L~l~~n~l~~~~~-~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 152 (524)
.-++.|.+.++.|..... ..|+...+.+++++|.+|.++. .+...+.++|+|+.|+++.|++...+...-..+.+|+
T Consensus 45 ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~ 124 (418)
T KOG2982|consen 45 RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLR 124 (418)
T ss_pred cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceE
Confidence 345556666666654422 3444444577788888888764 4555667888999999999888744332224566888
Q ss_pred eEecccCcccc-cCCccccCCCCCCEEEccCCccccc--CCcccc-CCCCCCEEEccCCcCCC--ccChhccCCCCCCEE
Q 040301 153 GLSLKYNNLEG-SIPYDLCHLKLMYGIRLTGNKLSGH--IPPCLA-SLTSLRELHLGSNKLTS--SIPSSLWSLEYILMI 226 (524)
Q Consensus 153 ~L~L~~n~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~-~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L 226 (524)
.|.|.+..+.= .....+..+|.++.|.++.|.+.-. ...... -.+.++.|++..|...- ..-.....+|++..+
T Consensus 125 ~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv 204 (418)
T KOG2982|consen 125 VLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSV 204 (418)
T ss_pred EEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchhe
Confidence 88888887752 2334566778888888888854311 111111 12345555555554320 011122335677777
Q ss_pred EcCCCcCccc-CCcCccCCCCCCEEEcCCCcCcccc--ccccccCCCCEEEccCCcccCC
Q 040301 227 NLSSNSLNDS-LPSNIQTLKVLRVLDLSRNQLSGDI--STIGALVDLETLSLASNQFQGP 283 (524)
Q Consensus 227 ~L~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~l~~L~~L~L~~N~l~~~ 283 (524)
.+..|.+... -...+..++.+..|+|+.|++.+.. +.+.+++.|..|.+++|++.+.
T Consensus 205 ~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~ 264 (418)
T KOG2982|consen 205 FVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDP 264 (418)
T ss_pred eeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCccccc
Confidence 7777766532 1233455667777788888876554 5677778888888888877643
No 373
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.78 E-value=2.1e-08 Score=97.75 Aligned_cols=91 Identities=22% Similarity=0.256 Sum_probs=74.5
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch--HHHHHHHHHHHHHhcCCCCCccceeEEEEcC--Ccce
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE--RAFRSFDSECEVLRNVCHRNLIKILSSCSNP--DFKA 506 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~ 506 (524)
..++|+..+.||+|+||.||+|.. .+|+.||+|.+..... .....+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 456799999999999999999996 4688999999864331 1233567899999999999999999998765 5689
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+||||++ ++|.+++.+
T Consensus 85 lv~e~~~-~~l~~~l~~ 100 (309)
T cd07845 85 LVMEYCE-QDLASLLDN 100 (309)
T ss_pred EEEecCC-CCHHHHHHh
Confidence 9999997 488888753
No 374
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.78 E-value=3.7e-08 Score=93.29 Aligned_cols=84 Identities=19% Similarity=0.210 Sum_probs=67.4
Q ss_pred CcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHH-hcCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVL-RNVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l-~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
+.+|+|+||.||+|.. .+++.||+|.+.... ......+..|..++ ...+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999996 468899999986543 12223445565544 455899999999999999999999999999
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
|+|.+++++
T Consensus 82 ~~L~~~l~~ 90 (260)
T cd05611 82 GDCASLIKT 90 (260)
T ss_pred CCHHHHHHH
Confidence 999999864
No 375
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.77 E-value=2.5e-08 Score=98.82 Aligned_cols=97 Identities=18% Similarity=0.212 Sum_probs=79.5
Q ss_pred chhhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEc
Q 040301 425 SYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSN 501 (524)
Q Consensus 425 ~~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~ 501 (524)
...++...+++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 4567777889999999999999999999985 578899999996532 2335678899999999999999999998865
Q ss_pred C------CcceEEEcccCCCCHHHHHH
Q 040301 502 P------DFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 502 ~------~~~~lv~e~~~~gsL~~~l~ 522 (524)
. ...++++|++ +++|.++++
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~ 113 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVK 113 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHh
Confidence 3 3468888877 789988764
No 376
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.76 E-value=5.1e-08 Score=95.19 Aligned_cols=86 Identities=23% Similarity=0.235 Sum_probs=72.6
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
|...+.+|+|+||.||+|.. .+++.+|+|.+.... ....+.+.+|+++++.++|||++++++++.+.+..|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55567899999999999996 468889999986432 23446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
+. |++.+++.
T Consensus 103 ~~-~~l~~~l~ 112 (313)
T cd06633 103 CL-GSASDLLE 112 (313)
T ss_pred CC-CCHHHHHH
Confidence 96 57877764
No 377
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.76 E-value=2.3e-08 Score=94.07 Aligned_cols=82 Identities=17% Similarity=0.153 Sum_probs=71.8
Q ss_pred ccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 442 LGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 442 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
+|+|+||.||++... +++.+|+|.+.... ......+..|+++++.++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999974 58899999987543 22456788999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
.+++++
T Consensus 81 ~~~l~~ 86 (250)
T cd05123 81 FSHLSK 86 (250)
T ss_pred HHHHHh
Confidence 999864
No 378
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.75 E-value=1.5e-08 Score=97.25 Aligned_cols=87 Identities=22% Similarity=0.256 Sum_probs=72.7
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccch-HHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCcceEEEccc
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
|...+.||+|++|.||+|... +++.+|+|++..... .......+|+..+++++ ||||+++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566789999999999999974 578899999865432 22334567999999999 999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
+|+|.+++++
T Consensus 81 -~~~l~~~~~~ 90 (283)
T cd07830 81 -EGNLYQLMKD 90 (283)
T ss_pred -CCCHHHHHHh
Confidence 7899988753
No 379
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.75 E-value=1.1e-09 Score=108.70 Aligned_cols=89 Identities=22% Similarity=0.255 Sum_probs=76.5
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
+.|.+...+|.|+||.||+|.-+ .+-.-|.|.+........++|.-||++|..++||+||++++.|..++.+||+.|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 44566778999999999999964 34456788887766677889999999999999999999999999999999999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
.||.....|-
T Consensus 112 ~GGAVDaiml 121 (1187)
T KOG0579|consen 112 GGGAVDAIML 121 (1187)
T ss_pred CCchHhHHHH
Confidence 9999887663
No 380
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.75 E-value=2.4e-09 Score=98.14 Aligned_cols=90 Identities=21% Similarity=0.200 Sum_probs=77.6
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
.++|+..+++|+|.||+|..++- .+++.||+|++++.. +.....-.-|-++|+..+||.+..+...|++.+.+|.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 46788899999999999999995 578999999997653 22334456788999999999999999999999999999
Q ss_pred EcccCCCCHHHHHH
Q 040301 509 WGRLLNISITIIRR 522 (524)
Q Consensus 509 ~e~~~~gsL~~~l~ 522 (524)
|||..||.|+-+|.
T Consensus 247 MeyanGGeLf~HLs 260 (516)
T KOG0690|consen 247 MEYANGGELFFHLS 260 (516)
T ss_pred EEEccCceEeeehh
Confidence 99999999987764
No 381
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.75 E-value=1.3e-08 Score=102.12 Aligned_cols=87 Identities=23% Similarity=0.321 Sum_probs=74.8
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCC-C-----CCccceeEEEEcCCcceE
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVC-H-----RNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H-----~niv~l~~~~~~~~~~~l 507 (524)
.|++.+.||+|.||+|.+|.. .+++.||||+++.... -..+-..|+.+|..++ | -|+|++++||...+..||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 789999999999999999996 5789999999976543 3345567999999886 3 389999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
|+|.++. +|.++||.
T Consensus 266 VfELL~~-NLYellK~ 280 (586)
T KOG0667|consen 266 VFELLST-NLYELLKN 280 (586)
T ss_pred eehhhhh-hHHHHHHh
Confidence 9998875 99999974
No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.75 E-value=1.3e-08 Score=96.51 Aligned_cols=88 Identities=17% Similarity=0.171 Sum_probs=71.0
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-----hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEE
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-----ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv 508 (524)
.|...+.||+|+||.||++... .+..+++|.++... .....++.+|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 3777889999999999999863 34445666554311 22344577899999999999999999999999999999
Q ss_pred EcccCCCCHHHHHH
Q 040301 509 WGRLLNISITIIRR 522 (524)
Q Consensus 509 ~e~~~~gsL~~~l~ 522 (524)
|||+++++|.++++
T Consensus 81 ~e~~~~~~l~~~~~ 94 (260)
T cd08222 81 TEYCEGRDLDCKLE 94 (260)
T ss_pred EEeCCCCCHHHHHH
Confidence 99999999998875
No 383
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=98.75 E-value=3.6e-08 Score=94.56 Aligned_cols=87 Identities=17% Similarity=0.242 Sum_probs=70.4
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCC-CCCccceeEEEEcC--CcceEEEc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVC-HRNLIKILSSCSNP--DFKALMWG 510 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~--~~~~lv~e 510 (524)
|...+.+|+|+||.||+|.. .+++.+|+|.+.... ........+|+.++.++. |+||+++++++.++ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 55678899999999999996 468899999986532 222234557899998885 99999999999987 88999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|++ |++.++++.
T Consensus 81 ~~~-~~l~~~l~~ 92 (282)
T cd07831 81 LMD-MNLYELIKG 92 (282)
T ss_pred cCC-ccHHHHHHh
Confidence 997 588888753
No 384
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.75 E-value=1.8e-09 Score=115.59 Aligned_cols=93 Identities=22% Similarity=0.335 Sum_probs=80.3
Q ss_pred hhhccccccCcccCCCCceEEEEE-eCCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGT-ISDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
..+-.++....||.|.||.||.|. ..+|...|||.+.... ........+|+.++..++|||+|++||+-...+..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 445567788999999999999999 4678999999886433 3345667899999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHHh
Q 040301 508 MWGRLLNISITIIRRH 523 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~ 523 (524)
.||||++|+|.+.+++
T Consensus 1312 FMEyC~~GsLa~ll~~ 1327 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEH 1327 (1509)
T ss_pred HHHHhccCcHHHHHHh
Confidence 9999999999998864
No 385
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.74 E-value=5.1e-08 Score=92.86 Aligned_cols=92 Identities=16% Similarity=0.070 Sum_probs=69.7
Q ss_pred hhhhhhhccccccCcc--cCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhc-CCCCCccceeEEEEcC
Q 040301 427 LDIQRATDEFNECNLL--GTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRN-VCHRNLIKILSSCSNP 502 (524)
Q Consensus 427 ~~l~~~~~~~~~~~~i--g~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~ 502 (524)
.+.....++|+..+.+ |+|+||.||++.. .++..+|+|.+........ |+..... .+||||+++++++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444445677777776 9999999999996 4678899999865432111 2222221 2799999999999999
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+..++||||+++|+|.+++++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~ 102 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKK 102 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHh
Confidence 999999999999999999864
No 386
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.73 E-value=5.8e-08 Score=93.11 Aligned_cols=83 Identities=14% Similarity=0.128 Sum_probs=65.0
Q ss_pred cccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHH---hcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 441 LLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVL---RNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l---~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.||+|+||.||++.. .+++.+|+|.+.... ......+.+|..++ ...+||+|+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 479999999999996 468899999986532 12223344554433 34579999999999999999999999999
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
+|+|.+++++
T Consensus 81 ~~~L~~~i~~ 90 (279)
T cd05633 81 GGDLHYHLSQ 90 (279)
T ss_pred CCCHHHHHHh
Confidence 9999988753
No 387
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.73 E-value=3.4e-08 Score=98.33 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=73.5
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD----- 503 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~----- 503 (524)
..++|+..+.||+|+||.||++.. ..++.+|||.+.... ....+.+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457899999999999999999986 467889999996532 334567889999999999999999999986543
Q ss_pred -cceEEEcccCCCCHHHHHH
Q 040301 504 -FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 504 -~~~lv~e~~~~gsL~~~l~ 522 (524)
..++||||+++ ++.++++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~ 113 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ 113 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh
Confidence 46999999975 6766653
No 388
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.73 E-value=2.9e-08 Score=101.38 Aligned_cols=84 Identities=18% Similarity=0.141 Sum_probs=71.8
Q ss_pred hccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..+|...+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+|||++++++..++..++||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 346888999999999999999974 578899996432 3356899999999999999999999999999999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+. |+|.+++.+
T Consensus 242 ~~-~~L~~~l~~ 252 (461)
T PHA03211 242 YR-SDLYTYLGA 252 (461)
T ss_pred cC-CCHHHHHHh
Confidence 95 799888753
No 389
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.73 E-value=4.3e-08 Score=95.46 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=72.7
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc----
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF---- 504 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~---- 504 (524)
..++|+..+.+|+|+||.||+|.. .+++.||||.+.... ......+.+|++++++++||||++++++|...+.
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 345688999999999999999996 468899999986432 2223456789999999999999999999876543
Q ss_pred ----ceEEEcccCCCCHHHHHH
Q 040301 505 ----KALMWGRLLNISITIIRR 522 (524)
Q Consensus 505 ----~~lv~e~~~~gsL~~~l~ 522 (524)
.++||||+. +++.++++
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~ 110 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLS 110 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHH
Confidence 499999997 48887764
No 390
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.73 E-value=4.1e-08 Score=98.08 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=73.5
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD----- 503 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~----- 503 (524)
..++|+..+.||+|+||.||++.. ..++.||||++.... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 456799999999999999999996 467889999996532 334567889999999999999999999886543
Q ss_pred -cceEEEcccCCCCHHHHHH
Q 040301 504 -FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 504 -~~~lv~e~~~~gsL~~~l~ 522 (524)
..|+||||+++ ++.++++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~ 120 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQ 120 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHH
Confidence 47999999975 7776654
No 391
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.73 E-value=2.9e-08 Score=96.95 Aligned_cols=83 Identities=16% Similarity=0.050 Sum_probs=67.1
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeecc--chHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCH
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQ--LERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISI 517 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 517 (524)
+..|.|+++.+|++.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3444445545555444 6889999999754 234557899999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 040301 518 TIIRRH 523 (524)
Q Consensus 518 ~~~l~~ 523 (524)
.+++++
T Consensus 87 ~~~l~~ 92 (314)
T cd08216 87 EDLLKT 92 (314)
T ss_pred HHHHHH
Confidence 999864
No 392
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.73 E-value=3.2e-08 Score=97.73 Aligned_cols=91 Identities=19% Similarity=0.197 Sum_probs=74.6
Q ss_pred hhccccccCcccCCCCceEEEEEeC-CCCEEEEEEeecc--chHHHHHHHHHHHHHhcC-CCCCccceeEEEEcC--Ccc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQ--LERAFRSFDSECEVLRNV-CHRNLIKILSSCSNP--DFK 505 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~--~~~ 505 (524)
..++|+..+.+|+|+||.||+|... +++.+|+|++... .......+.+|+.+++++ +||||++++++|... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888999999999999999964 6788999988542 223445677899999999 999999999998654 368
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
++||||++ ++|.+++++
T Consensus 85 ~lv~e~~~-~~L~~~~~~ 101 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA 101 (337)
T ss_pred EEEecccc-cCHHHHHhc
Confidence 99999998 599988764
No 393
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.72 E-value=2.4e-08 Score=98.82 Aligned_cols=88 Identities=17% Similarity=0.218 Sum_probs=74.5
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcC----------
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNP---------- 502 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~---------- 502 (524)
..|+..+.||.|+||.||+|.. .++..||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5788899999999999999996 56889999999765555567788999999999999999999876543
Q ss_pred ----CcceEEEcccCCCCHHHHHH
Q 040301 503 ----DFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 503 ----~~~~lv~e~~~~gsL~~~l~ 522 (524)
...++||||++ ++|.++++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~ 107 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE 107 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH
Confidence 35789999997 58988774
No 394
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.72 E-value=5.4e-08 Score=94.81 Aligned_cols=88 Identities=23% Similarity=0.249 Sum_probs=74.1
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeecc---chHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQ---LERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
..|+..+.+|+|+||.||+|.. .++..+|+|.+... .....+++.+|+++++.++|+|++++.+++..+...++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3477778999999999999996 46788999998642 2334567889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHH
Q 040301 510 GRLLNISITIIRR 522 (524)
Q Consensus 510 e~~~~gsL~~~l~ 522 (524)
||+. |++.+++.
T Consensus 95 e~~~-~~l~~~~~ 106 (308)
T cd06634 95 EYCL-GSASDLLE 106 (308)
T ss_pred EccC-CCHHHHHH
Confidence 9997 68877663
No 395
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.71 E-value=2.7e-10 Score=114.72 Aligned_cols=199 Identities=25% Similarity=0.231 Sum_probs=133.9
Q ss_pred CCCCCeEEcccCcCcccC-CccccCCCCCCeEecccCcccccCCccccCC-CCCCEEEccCCccc---ccCCc---cccC
Q 040301 124 LRGLTLLSLFNNDLNGTI-SPTMGRLKQLRGLSLKYNNLEGSIPYDLCHL-KLMYGIRLTGNKLS---GHIPP---CLAS 195 (524)
Q Consensus 124 l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~l~~n~l~---~~~~~---~~~~ 195 (524)
+++++.|.+-...-.+.. |-.+..+.+|+.|-|.++++... ..+..+ ..|+.|-..+ .+. ..+.. .+.+
T Consensus 83 lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~n 159 (1096)
T KOG1859|consen 83 LQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHN-SLDALRHVFASCGGDISN 159 (1096)
T ss_pred HhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhc-cHHHHHHHHHHhcccccc
Confidence 344445444332222222 55667788999999999988731 111111 1233333322 111 00000 0111
Q ss_pred ---CCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCcccc-ccccccCCCC
Q 040301 196 ---LTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDI-STIGALVDLE 271 (524)
Q Consensus 196 ---l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~l~~L~ 271 (524)
...|...+++.|.+. ....++.-++.|+.|+|++|++... +.+..++.|++|||++|.+...+ ....++. |+
T Consensus 160 s~~Wn~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~ 235 (1096)
T KOG1859|consen 160 SPVWNKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQ 235 (1096)
T ss_pred chhhhhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-he
Confidence 235777888999987 6778888899999999999999753 37888999999999999998777 3344444 99
Q ss_pred EEEccCCcccCCCcccccCCCCCCEEeCCCCcCCCCC-cccccCCCCCCeEEccCCcCccc
Q 040301 272 TLSLASNQFQGPIPESVGSLISLESLDLSGNNLSGKI-PKSLETLSHLKQFNASHNRLEGK 331 (524)
Q Consensus 272 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~n~l~~~ 331 (524)
.|.+++|.++.. ..+.++.+|+.||+++|-+.+.. -..+..+..|+.|++.+||+.|.
T Consensus 236 ~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 236 LLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred eeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 999999998843 45788999999999999987432 13445677889999999999875
No 396
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.71 E-value=3.6e-08 Score=98.15 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=71.7
Q ss_pred hhccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
...+|+..+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++..++..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999974 5678999975432 23468999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
|+. |+|.+++++
T Consensus 138 ~~~-~~l~~~l~~ 149 (357)
T PHA03209 138 HYS-SDLYTYLTK 149 (357)
T ss_pred ccC-CcHHHHHHh
Confidence 996 689888753
No 397
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.70 E-value=2.6e-08 Score=95.59 Aligned_cols=87 Identities=22% Similarity=0.278 Sum_probs=74.8
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
|+....+|+|+||.||+|+.. +++.+|+|.+.... ....+.+.+|+.++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456678999999999999974 58899999997643 333567789999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
+ ++|.+++++
T Consensus 81 ~-~~l~~~i~~ 90 (282)
T cd07829 81 D-MDLKKYLDK 90 (282)
T ss_pred C-cCHHHHHHh
Confidence 8 599998864
No 398
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.69 E-value=6.6e-08 Score=94.60 Aligned_cols=81 Identities=22% Similarity=0.194 Sum_probs=65.7
Q ss_pred cCcccCCCCceEEEEEeC---CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEc--CCcceEEEcccC
Q 040301 439 CNLLGTGSFGSVYKGTIS---DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSN--PDFKALMWGRLL 513 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~~ 513 (524)
...||+|+||.||+|... +++.+|+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 358999999999999853 45789999986543 23456789999999999999999999865 456899999997
Q ss_pred CCCHHHHHH
Q 040301 514 NISITIIRR 522 (524)
Q Consensus 514 ~gsL~~~l~ 522 (524)
++|.++++
T Consensus 84 -~~l~~~~~ 91 (317)
T cd07868 84 -HDLWHIIK 91 (317)
T ss_pred -CCHHHHHH
Confidence 58887764
No 399
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.69 E-value=4.5e-08 Score=94.31 Aligned_cols=88 Identities=19% Similarity=0.345 Sum_probs=68.4
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcC---CCCCccceeEEEEcC-----C
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNV---CHRNLIKILSSCSNP-----D 503 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~~-----~ 503 (524)
.|+..+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+++++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 377888999999999999996 468899999986532 12233456777777655 799999999998652 4
Q ss_pred cceEEEcccCCCCHHHHHHh
Q 040301 504 FKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~~ 523 (524)
..++||||+. ++|.+++++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~ 99 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDK 99 (288)
T ss_pred eEEEEEcccc-cCHHHHHHh
Confidence 5799999998 589888754
No 400
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.69 E-value=8e-08 Score=92.10 Aligned_cols=82 Identities=13% Similarity=0.116 Sum_probs=64.8
Q ss_pred cccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHH---HHhcCCCCCccceeEEEEcCCcceEEEcccC
Q 040301 441 LLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECE---VLRNVCHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~---~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
.||+|+||.||++.. .+++.||+|.+.... ......+..|.. .++...||+|+++++++..++..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 479999999999986 468899999986532 122223444443 4455689999999999999999999999999
Q ss_pred CCCHHHHHH
Q 040301 514 NISITIIRR 522 (524)
Q Consensus 514 ~gsL~~~l~ 522 (524)
+|+|.++++
T Consensus 81 g~~L~~~l~ 89 (278)
T cd05606 81 GGDLHYHLS 89 (278)
T ss_pred CCcHHHHHH
Confidence 999998875
No 401
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.69 E-value=3.9e-08 Score=97.10 Aligned_cols=90 Identities=20% Similarity=0.257 Sum_probs=73.8
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC-----Cc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP-----DF 504 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-----~~ 504 (524)
...|...+.+|+|+||.||+|.. .+++.||||.+.... ......+.+|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45688899999999999999996 568899999986532 23345677899999999999999999988654 34
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
.++|+||+. ++|.+++++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~ 101 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS 101 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc
Confidence 799999996 689888753
No 402
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.68 E-value=8e-08 Score=95.55 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=74.1
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeecc--chHHHHHHHHHHHHHhcCCCCCccceeEEEEcC------
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQ--LERAFRSFDSECEVLRNVCHRNLIKILSSCSNP------ 502 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------ 502 (524)
..+.|+..+.||+|+||.||+|.. .+++.||+|.+... .......+.+|++++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 456799999999999999999996 57889999998643 233456678899999999999999999998654
Q ss_pred CcceEEEcccCCCCHHHHHH
Q 040301 503 DFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~ 522 (524)
...|+||||+. |+|.+++.
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~ 112 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQ 112 (353)
T ss_pred CcEEEEEeccC-CCHHHHHh
Confidence 34699999997 58888764
No 403
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.68 E-value=3e-08 Score=97.80 Aligned_cols=89 Identities=18% Similarity=0.180 Sum_probs=73.9
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEc----CCcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSN----PDFK 505 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~----~~~~ 505 (524)
.++|+..+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 36789999999999999999996 468899999986532 2345667789999999999999999998864 3468
Q ss_pred eEEEcccCCCCHHHHHH
Q 040301 506 ALMWGRLLNISITIIRR 522 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~ 522 (524)
++||||+. |+|.++++
T Consensus 84 ~lv~e~~~-~~l~~~~~ 99 (334)
T cd07855 84 YVVMDLME-SDLHHIIH 99 (334)
T ss_pred EEEEehhh-hhHHHHhc
Confidence 99999996 68988874
No 404
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=98.67 E-value=7.1e-08 Score=92.93 Aligned_cols=87 Identities=15% Similarity=0.159 Sum_probs=71.8
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 510 (524)
++|+....||+|+||.||++.. .+++.+|+|.+.... ......+.+|+.++.++. ||||+++++++..+...+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 3566678899999999999996 468899999987543 334567889999999996 9999999999999999999999
Q ss_pred ccCCCCHHHHH
Q 040301 511 RLLNISITIIR 521 (524)
Q Consensus 511 ~~~~gsL~~~l 521 (524)
|+.. ++.++.
T Consensus 84 ~~~~-~l~~l~ 93 (288)
T cd06616 84 LMDI-SLDKFY 93 (288)
T ss_pred cccC-CHHHHH
Confidence 9874 665543
No 405
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.67 E-value=5.4e-08 Score=96.06 Aligned_cols=89 Identities=20% Similarity=0.246 Sum_probs=73.6
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----cc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD-----FK 505 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~ 505 (524)
.++|+..+.+|+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46799999999999999999986 568899999986432 334567889999999999999999999876543 47
Q ss_pred eEEEcccCCCCHHHHHH
Q 040301 506 ALMWGRLLNISITIIRR 522 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~ 522 (524)
++|+||++ +++.++++
T Consensus 84 ~lv~e~~~-~~l~~~~~ 99 (336)
T cd07849 84 YIVQELME-TDLYKLIK 99 (336)
T ss_pred EEEehhcc-cCHHHHHh
Confidence 99999997 48887764
No 406
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.66 E-value=6.1e-08 Score=93.03 Aligned_cols=87 Identities=23% Similarity=0.332 Sum_probs=74.2
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
|+..+.||+|++|.||+|.. .+++.+|+|.+.... ......+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 55678899999999999996 468889999986543 234567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHHh
Q 040301 513 LNISITIIRRH 523 (524)
Q Consensus 513 ~~gsL~~~l~~ 523 (524)
++ ++.+++++
T Consensus 81 ~~-~l~~~l~~ 90 (283)
T cd05118 81 DT-DLYKLIKD 90 (283)
T ss_pred CC-CHHHHHHh
Confidence 85 88887753
No 407
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.65 E-value=8.7e-08 Score=93.71 Aligned_cols=80 Identities=23% Similarity=0.216 Sum_probs=65.1
Q ss_pred CcccCCCCceEEEEEeC---CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEc--CCcceEEEcccCC
Q 040301 440 NLLGTGSFGSVYKGTIS---DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSN--PDFKALMWGRLLN 514 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~~~ 514 (524)
..||+|+||.||+|... ++..+|+|.+.... ....+.+|++++++++||||+++++++.. +...++||||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 57999999999999963 45679999986543 23457789999999999999999999854 4578999999874
Q ss_pred CCHHHHHH
Q 040301 515 ISITIIRR 522 (524)
Q Consensus 515 gsL~~~l~ 522 (524)
+|.++++
T Consensus 85 -~l~~~~~ 91 (317)
T cd07867 85 -DLWHIIK 91 (317)
T ss_pred -cHHHHHH
Confidence 7777764
No 408
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.65 E-value=7e-08 Score=97.35 Aligned_cols=83 Identities=17% Similarity=0.242 Sum_probs=70.7
Q ss_pred ccccccCcccCCCCceEEEEEeC---CCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS---DWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e 510 (524)
..|...+.||+|+||.||+|... .+..||+|.+... +.+.+|++++++++|||||++++++......++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 46899999999999999999852 3567999988643 234579999999999999999999999999999999
Q ss_pred ccCCCCHHHHHH
Q 040301 511 RLLNISITIIRR 522 (524)
Q Consensus 511 ~~~~gsL~~~l~ 522 (524)
|+. ++|.+++.
T Consensus 167 ~~~-~~l~~~l~ 177 (392)
T PHA03207 167 KYK-CDLFTYVD 177 (392)
T ss_pred hcC-CCHHHHHH
Confidence 996 68888874
No 409
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.65 E-value=9.3e-08 Score=92.53 Aligned_cols=90 Identities=11% Similarity=0.126 Sum_probs=73.4
Q ss_pred hhccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCcceEE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDFKALM 508 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv 508 (524)
..++|+..+.+|+|+||.||+|... +++.||||.++... ......+.+|+.++.+.. ||||++++++|.++...|+|
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 3456888899999999999999975 48899999997543 234456777888777774 99999999999999999999
Q ss_pred EcccCCCCHHHHHH
Q 040301 509 WGRLLNISITIIRR 522 (524)
Q Consensus 509 ~e~~~~gsL~~~l~ 522 (524)
|||++ +++.+++.
T Consensus 93 ~e~~~-~~l~~l~~ 105 (296)
T cd06618 93 MELMS-TCLDKLLK 105 (296)
T ss_pred eeccC-cCHHHHHH
Confidence 99986 47776654
No 410
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.65 E-value=1.8e-10 Score=115.83 Aligned_cols=126 Identities=31% Similarity=0.337 Sum_probs=75.5
Q ss_pred CCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCCccChhccCCCCCCEEEcC
Q 040301 150 QLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTSSIPSSLWSLEYILMINLS 229 (524)
Q Consensus 150 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 229 (524)
.|...+.++|.+. .+..++.-++.++.|+|+.|++... +.+..++.|++|||++|.++ .+|..-..-..|+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhhheeeeec
Confidence 4556666666666 5555666666666777777766533 25666667777777777666 344322222336677777
Q ss_pred CCcCcccCCcCccCCCCCCEEEcCCCcCcccc--ccccccCCCCEEEccCCccc
Q 040301 230 SNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDI--STIGALVDLETLSLASNQFQ 281 (524)
Q Consensus 230 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~l~~L~~L~L~~N~l~ 281 (524)
+|.++. + ..+.++.+|+.||+++|-+.+.. ..+..+..|..|+|.+|++-
T Consensus 241 nN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 776653 2 23556666777777777666543 44555566666677776654
No 411
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.64 E-value=3.8e-08 Score=97.41 Aligned_cols=92 Identities=18% Similarity=0.253 Sum_probs=76.0
Q ss_pred hhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc---
Q 040301 431 RATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF--- 504 (524)
Q Consensus 431 ~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~--- 504 (524)
...++|+....||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++.+++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3467899999999999999999997 467889999986432 2344667889999999999999999998876655
Q ss_pred ---ceEEEcccCCCCHHHHHHh
Q 040301 505 ---KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ---~~lv~e~~~~gsL~~~l~~ 523 (524)
.++|+||+ +++|.++++.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~ 112 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC 112 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc
Confidence 89999998 5799988753
No 412
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.63 E-value=5.6e-08 Score=95.69 Aligned_cols=88 Identities=18% Similarity=0.240 Sum_probs=74.8
Q ss_pred cccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC-----cce
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD-----FKA 506 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~~ 506 (524)
+|+..+.||+|+||.||+|... ++..+|+|++.... ....+.+.+|+++++.++||||+++++++...+ ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 3778889999999999999964 58899999997543 334577899999999999999999999998875 789
Q ss_pred EEEcccCCCCHHHHHHh
Q 040301 507 LMWGRLLNISITIIRRH 523 (524)
Q Consensus 507 lv~e~~~~gsL~~~l~~ 523 (524)
+||||++ ++|.+++++
T Consensus 81 lv~e~~~-~~l~~~l~~ 96 (330)
T cd07834 81 IVTELME-TDLHKVIKS 96 (330)
T ss_pred EEecchh-hhHHHHHhC
Confidence 9999998 588888754
No 413
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.62 E-value=2.5e-08 Score=89.44 Aligned_cols=91 Identities=16% Similarity=0.193 Sum_probs=77.3
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--------hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcC
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--------ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNP 502 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~ 502 (524)
-..|...+.+|.|..+.|.++.. ++|..+|+|++.... ....++-.+|+.+|+++ .||+|+++.++|.++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 34677888999999999998886 578899999996432 22345667999999987 799999999999999
Q ss_pred CcceEEEcccCCCCHHHHHHh
Q 040301 503 DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 503 ~~~~lv~e~~~~gsL~~~l~~ 523 (524)
..+++|+|.|+.|.|+|+|..
T Consensus 96 sF~FlVFdl~prGELFDyLts 116 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTS 116 (411)
T ss_pred chhhhhhhhcccchHHHHhhh
Confidence 999999999999999999853
No 414
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.60 E-value=1.7e-07 Score=90.06 Aligned_cols=87 Identities=24% Similarity=0.382 Sum_probs=70.0
Q ss_pred ccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc--hHHHHHHHHHHHHHhcC---CCCCccceeEEEEcCCc-----
Q 040301 436 FNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL--ERAFRSFDSECEVLRNV---CHRNLIKILSSCSNPDF----- 504 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~H~niv~l~~~~~~~~~----- 504 (524)
|+..+.+|+|+||.||+|... +++.+|+|.+.... ......+.+|+.+++++ +||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 566788999999999999975 58899999996432 22344566788777655 69999999999998777
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
.+++|||+. ++|.+++++
T Consensus 81 ~~l~~e~~~-~~l~~~l~~ 98 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSK 98 (287)
T ss_pred eEEEehhcc-cCHHHHHHH
Confidence 999999997 589888754
No 415
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.58 E-value=1.6e-07 Score=93.03 Aligned_cols=88 Identities=20% Similarity=0.261 Sum_probs=71.8
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC------
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD------ 503 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~------ 503 (524)
..+|.....||+|+||.||+|+. .+++.||+|++.... ......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46899999999999999999996 468899999986432 223456789999999999999999999987643
Q ss_pred cceEEEcccCCCCHHHHH
Q 040301 504 FKALMWGRLLNISITIIR 521 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l 521 (524)
..++|+||+.. ++.+++
T Consensus 94 ~~~lv~e~~~~-~l~~~~ 110 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIM 110 (342)
T ss_pred eEEEEeccccc-CHHHHH
Confidence 35999999974 777654
No 416
>PTZ00284 protein kinase; Provisional
Probab=98.58 E-value=1.4e-07 Score=97.44 Aligned_cols=95 Identities=22% Similarity=0.217 Sum_probs=71.9
Q ss_pred hhhhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCC------CCccceeEEE
Q 040301 427 LDIQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCH------RNLIKILSSC 499 (524)
Q Consensus 427 ~~l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H------~niv~l~~~~ 499 (524)
+++....++|+..+.||+|+||.||+|.. .+++.||||+++... ...+++..|+.++.+++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 34445678899999999999999999996 467889999996432 223445667777766654 4588999988
Q ss_pred EcC-CcceEEEcccCCCCHHHHHHh
Q 040301 500 SNP-DFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 500 ~~~-~~~~lv~e~~~~gsL~~~l~~ 523 (524)
..+ ...|+|||++ +++|.+++.+
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~~ 224 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIMK 224 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHHH
Confidence 765 4689999988 6789988753
No 417
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.58 E-value=3.6e-07 Score=82.98 Aligned_cols=82 Identities=24% Similarity=0.340 Sum_probs=72.3
Q ss_pred ccCCCCceEEEEEeC-CCCEEEEEEeeccchH-HHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCHHH
Q 040301 442 LGTGSFGSVYKGTIS-DWTNVAIKIFNLQLER-AFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISITI 519 (524)
Q Consensus 442 ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 519 (524)
||+|.+|.||++... +++.+++|.+...... ..+.+.+|++.+++++|++|+++++++......++++||+.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999974 4889999999765432 45678999999999999999999999999999999999999999999
Q ss_pred HHHh
Q 040301 520 IRRH 523 (524)
Q Consensus 520 ~l~~ 523 (524)
++.+
T Consensus 81 ~~~~ 84 (215)
T cd00180 81 LLKE 84 (215)
T ss_pred HHHh
Confidence 9864
No 418
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.56 E-value=3e-08 Score=105.85 Aligned_cols=81 Identities=27% Similarity=0.393 Sum_probs=65.4
Q ss_pred hhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
.....+|+....+|+||||.||+++- -||+.||||+|+-.. ........+|++.+++++|||||+++..+.+...-.-
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 34667889999999999999999994 489999999997653 3445678899999999999999999998877544443
Q ss_pred EEc
Q 040301 508 MWG 510 (524)
Q Consensus 508 v~e 510 (524)
++|
T Consensus 555 ~~e 557 (1351)
T KOG1035|consen 555 VLE 557 (1351)
T ss_pred ccc
Confidence 333
No 419
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.55 E-value=1.6e-07 Score=91.54 Aligned_cols=89 Identities=18% Similarity=0.226 Sum_probs=71.3
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch--HHHHHHHHHHHHHhcCCCCCccceeEEEEcCC------
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE--RAFRSFDSECEVLRNVCHRNLIKILSSCSNPD------ 503 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~------ 503 (524)
.++|+..+.||+|+||.||+|+. .+++.+|+|.+..... .....+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 46899999999999999999996 4688899999865332 22345778999999999999999999875533
Q ss_pred --cceEEEcccCCCCHHHHHH
Q 040301 504 --FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 504 --~~~lv~e~~~~gsL~~~l~ 522 (524)
.+++|+||+.+ ++.+.+.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~ 106 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLE 106 (311)
T ss_pred CceEEEEEecCCc-CHHHHHh
Confidence 46999999975 6766553
No 420
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.54 E-value=2.5e-08 Score=89.27 Aligned_cols=85 Identities=16% Similarity=0.162 Sum_probs=71.2
Q ss_pred ccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHh-cCCCCCccceeEEEEcCCcceEEEcccCC
Q 040301 438 ECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLR-NVCHRNLIKILSSCSNPDFKALMWGRLLN 514 (524)
Q Consensus 438 ~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~-~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 514 (524)
....||.|.||+|++... +.|+..|||++.... ....+++..|.+... .-+.||||++||++-.++..||-||.|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd- 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD- 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence 346899999999999986 578999999998655 356778999997654 4589999999999999999999999997
Q ss_pred CCHHHHHHh
Q 040301 515 ISITIIRRH 523 (524)
Q Consensus 515 gsL~~~l~~ 523 (524)
-|+..+.+.
T Consensus 147 ~SlDklYk~ 155 (361)
T KOG1006|consen 147 ISLDKLYKR 155 (361)
T ss_pred hhHHHHHHH
Confidence 488777654
No 421
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.54 E-value=7e-08 Score=95.29 Aligned_cols=89 Identities=21% Similarity=0.286 Sum_probs=71.8
Q ss_pred ccccccCcccCCCCceEEEEEeCC-CCEEEEEEeeccch--------HHHHHHHHHHHHHhcCC---CCCccceeEEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISD-WTNVAIKIFNLQLE--------RAFRSFDSECEVLRNVC---HRNLIKILSSCSN 501 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~---H~niv~l~~~~~~ 501 (524)
.+|+....+|+|+||+|+.|.++. ...|++|.+.+... ......-.||.+|.+++ |+||++++.+|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 468889999999999999999854 45688999865431 11123457999999997 9999999999999
Q ss_pred CCcceEEEcc-cCCCCHHHHHH
Q 040301 502 PDFKALMWGR-LLNISITIIRR 522 (524)
Q Consensus 502 ~~~~~lv~e~-~~~gsL~~~l~ 522 (524)
++++||+||- =++-+|+++|.
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE 662 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE 662 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh
Confidence 9999999994 45678999885
No 422
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.53 E-value=1.9e-07 Score=84.89 Aligned_cols=89 Identities=8% Similarity=0.053 Sum_probs=71.2
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHH---H------HHHHHHHHHhcCCCCCccceeEEEEcC
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAF---R------SFDSECEVLRNVCHRNLIKILSSCSNP 502 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~---~------~~~~Ei~~l~~l~H~niv~l~~~~~~~ 502 (524)
-...|...+.+|.|+||.||.+.. ++..+|+|.+.+...... + .+.+|+..+.++.||+|..+..++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357799999999999999998765 566899999975432111 1 268999999999999999999986643
Q ss_pred --------CcceEEEcccCCCCHHHHH
Q 040301 503 --------DFKALMWGRLLNISITIIR 521 (524)
Q Consensus 503 --------~~~~lv~e~~~~gsL~~~l 521 (524)
...++||||++|.+|.++.
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~ 134 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMP 134 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhh
Confidence 3578999999999997763
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.52 E-value=1.5e-07 Score=84.14 Aligned_cols=80 Identities=15% Similarity=0.071 Sum_probs=57.6
Q ss_pred cCcccCCCCceEEEEEeCCCCEEEEEEeeccchH--H-------HHH-----------------HHHHHHHHhcCCCCCc
Q 040301 439 CNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLER--A-------FRS-----------------FDSECEVLRNVCHRNL 492 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~Ei~~l~~l~H~ni 492 (524)
...||+|+||.||+|...+|+.||||.++..... . ... ..+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3579999999999999878999999999653210 0 112 2359999999988877
Q ss_pred cceeEEEEcCCcceEEEcccCCCCHHHH
Q 040301 493 IKILSSCSNPDFKALMWGRLLNISITII 520 (524)
Q Consensus 493 v~l~~~~~~~~~~~lv~e~~~~gsL~~~ 520 (524)
.....+.. ...+|||||++++++...
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~ 107 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAP 107 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcch
Confidence 54443322 234899999998876543
No 424
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=98.51 E-value=2.5e-08 Score=95.63 Aligned_cols=91 Identities=15% Similarity=0.176 Sum_probs=78.4
Q ss_pred hhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 507 (524)
....|..-+++|+|+||.||.++. .+|+.||+|++.+.. .+.......|-.++.+++.+.||.+-.+|.+.+.+|+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LCl 262 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCL 262 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEE
Confidence 345577788999999999999996 579999999996543 3445667899999999999999999999999999999
Q ss_pred EEcccCCCCHHHHHH
Q 040301 508 MWGRLLNISITIIRR 522 (524)
Q Consensus 508 v~e~~~~gsL~~~l~ 522 (524)
|+..|.||+|.-+|-
T Consensus 263 VLtlMNGGDLkfHiy 277 (591)
T KOG0986|consen 263 VLTLMNGGDLKFHIY 277 (591)
T ss_pred EEEeecCCceeEEee
Confidence 999999999986653
No 425
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.50 E-value=7.6e-08 Score=96.16 Aligned_cols=88 Identities=22% Similarity=0.268 Sum_probs=70.3
Q ss_pred cccCcccCCCCceEEEEEe-CCCCEEEEEE--eec--cchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCc--ceEEE
Q 040301 437 NECNLLGTGSFGSVYKGTI-SDWTNVAIKI--FNL--QLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDF--KALMW 509 (524)
Q Consensus 437 ~~~~~ig~g~~g~v~~~~~-~~~~~vavK~--~~~--~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~--~~lv~ 509 (524)
.....+|+|.|-+||+|.. .+|..||=-. +.. ......+.|..|+++|+.++|||||++|.++.+... +-+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3456899999999999996 3566665211 211 124456899999999999999999999999987654 88999
Q ss_pred cccCCCCHHHHHHhC
Q 040301 510 GRLLNISITIIRRHL 524 (524)
Q Consensus 510 e~~~~gsL~~~l~~~ 524 (524)
|.|..|+|+.|++++
T Consensus 123 EL~TSGtLr~Y~kk~ 137 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKH 137 (632)
T ss_pred ecccCCcHHHHHHHh
Confidence 999999999999863
No 426
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.49 E-value=1.5e-07 Score=92.67 Aligned_cols=90 Identities=17% Similarity=0.207 Sum_probs=78.1
Q ss_pred hccccccCcccCCCCceEEEEEeCCCCEEEEEEee--ccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFN--LQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~--~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 509 (524)
-..|++.++||+||.+.||++.-.+.+.||+|++. ..+.+...-|.+|+..|.++ .|.+||++++|-..++++||||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 35699999999999999999998777888888774 34456678899999999999 5999999999999999999999
Q ss_pred cccCCCCHHHHHHh
Q 040301 510 GRLLNISITIIRRH 523 (524)
Q Consensus 510 e~~~~gsL~~~l~~ 523 (524)
||=+ -+|..+|++
T Consensus 440 E~Gd-~DL~kiL~k 452 (677)
T KOG0596|consen 440 ECGD-IDLNKILKK 452 (677)
T ss_pred eccc-ccHHHHHHh
Confidence 9665 699999875
No 427
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.48 E-value=4.1e-08 Score=85.92 Aligned_cols=88 Identities=22% Similarity=0.441 Sum_probs=74.4
Q ss_pred hhccccccCcccCCCCceEEEEE-eCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCC-CCCccceeEEEEcCC--cceE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGT-ISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVC-HRNLIKILSSCSNPD--FKAL 507 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~--~~~l 507 (524)
..++|++.+.+|+|.|+.|+.|. ..+.+.++||.+++..+ +...+|+.+|..++ ||||+++++...++. ...+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 45789999999999999999999 45677899999987653 56789999999996 999999999998754 5689
Q ss_pred EEcccCCCCHHHHHH
Q 040301 508 MWGRLLNISITIIRR 522 (524)
Q Consensus 508 v~e~~~~gsL~~~l~ 522 (524)
|+||+.+-+......
T Consensus 113 iFE~v~n~Dfk~ly~ 127 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP 127 (338)
T ss_pred HhhhhccccHHHHhh
Confidence 999999988766543
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.47 E-value=1.4e-06 Score=91.29 Aligned_cols=90 Identities=12% Similarity=0.064 Sum_probs=69.0
Q ss_pred hhccccccCcccCCCCceEEEEEeCCCCEEEEEEe-ecc-c------hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCC
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIF-NLQ-L------ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPD 503 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~-~~~-~------~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~ 503 (524)
....|...+.||+|+||.||+|.+.... +++|+. ... . ....+.+.+|++++..++|++++..+.++..++
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3444566789999999999999975433 344432 211 1 112456889999999999999999888888888
Q ss_pred cceEEEcccCCCCHHHHHH
Q 040301 504 FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 504 ~~~lv~e~~~~gsL~~~l~ 522 (524)
..++||||+++++|.++++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~ 428 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE 428 (535)
T ss_pred CCEEEEEecCCCcHHHHHH
Confidence 8999999999999999874
No 429
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.46 E-value=2.7e-07 Score=95.98 Aligned_cols=90 Identities=16% Similarity=0.135 Sum_probs=67.3
Q ss_pred hhccccccCcccCCCCceEEEEEeCC--CCEEEEEEe--------------ec---cchHHHHHHHHHHHHHhcCCCCCc
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISD--WTNVAIKIF--------------NL---QLERAFRSFDSECEVLRNVCHRNL 492 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~--~~~vavK~~--------------~~---~~~~~~~~~~~Ei~~l~~l~H~ni 492 (524)
..++|+..+.||+|+||.||+|.... +...+.|.+ .. ........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34689999999999999999987522 222222211 00 011234568899999999999999
Q ss_pred cceeEEEEcCCcceEEEcccCCCCHHHHHH
Q 040301 493 IKILSSCSNPDFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 493 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 522 (524)
|++++++...+..|+|+|++. +++.+++.
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~ 254 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMY 254 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHh
Confidence 999999999999999999986 57777653
No 430
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.45 E-value=5.7e-07 Score=82.27 Aligned_cols=82 Identities=10% Similarity=0.037 Sum_probs=67.5
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeeccc---h-----HHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQL---E-----RAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~---~-----~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
+.||+|++|.||+|.. .|..+++|...... . .....+.+|++++..+.|++++....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5789999999999987 66788999765322 1 1234678999999999999998888888788889999999
Q ss_pred cCCCCHHHHHH
Q 040301 512 LLNISITIIRR 522 (524)
Q Consensus 512 ~~~gsL~~~l~ 522 (524)
++|++|.+++.
T Consensus 81 ~~G~~L~~~~~ 91 (211)
T PRK14879 81 IEGEPLKDLIN 91 (211)
T ss_pred eCCcCHHHHHH
Confidence 99999998874
No 431
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.44 E-value=1.4e-07 Score=94.16 Aligned_cols=86 Identities=14% Similarity=0.176 Sum_probs=75.1
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
|...+.||-|.||+|..+.. ++...||+|.+++.+ ..+....+.|-.||.+.+.+=||++|..|++.+.+|.||||
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdY 710 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 710 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEec
Confidence 66788999999999999884 456679999997655 34456678999999999999999999999999999999999
Q ss_pred cCCCCHHHHH
Q 040301 512 LLNISITIIR 521 (524)
Q Consensus 512 ~~~gsL~~~l 521 (524)
++||++-.+|
T Consensus 711 IPGGDmMSLL 720 (1034)
T KOG0608|consen 711 IPGGDMMSLL 720 (1034)
T ss_pred cCCccHHHHH
Confidence 9999998776
No 432
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.43 E-value=2.4e-08 Score=89.60 Aligned_cols=77 Identities=25% Similarity=0.388 Sum_probs=42.4
Q ss_pred CCCccEEEccCCcccccC----CcccccccCCCEEEccccccCCCCCCccccC-----ccccCCCCCCCCEEEccCCCCC
Q 040301 19 HQIYWVMDLSSNSFSGHI----PNTFGNLRHLSSLLLTWNNLTTESSLADQWS-----FLSALTNCRHLKALSLGSNPLG 89 (524)
Q Consensus 19 ~~~l~~Ldls~n~l~~~~----p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-----~~~~~~~l~~L~~L~l~~n~l~ 89 (524)
+..++.+|||+|.|...- ...+.+-.+|+..+++.-...... ..++ +...+.+++.|+..+||+|-+.
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~k---de~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg 105 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDK---DELYSNLVMLLKALLKCPRLQKVDLSDNAFG 105 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccH---HHHHHHHHHHHHHHhcCCcceeeeccccccC
Confidence 356777888888776432 333445556666666653322210 0111 1134556677777777777776
Q ss_pred CCCChhHhc
Q 040301 90 GILPPVIGN 98 (524)
Q Consensus 90 ~~~~~~~~~ 98 (524)
...|..++.
T Consensus 106 ~~~~e~L~d 114 (388)
T COG5238 106 SEFPEELGD 114 (388)
T ss_pred cccchHHHH
Confidence 665555444
No 433
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.42 E-value=6.1e-07 Score=83.73 Aligned_cols=74 Identities=11% Similarity=-0.000 Sum_probs=61.8
Q ss_pred CCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 445 GSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 445 g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
|.||.||++.. .+++.+|+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 88999999996 578899999997543 233455556667899999999999999999999999999999998853
No 434
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.41 E-value=6.8e-07 Score=83.27 Aligned_cols=78 Identities=19% Similarity=0.204 Sum_probs=68.6
Q ss_pred CCceEEEEEeC-CCCEEEEEEeeccchHH-HHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCCHHHHHHh
Q 040301 446 SFGSVYKGTIS-DWTNVAIKIFNLQLERA-FRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 446 ~~g~v~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+||.||+|... +++.+|+|.+....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.++++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999975 58899999997654333 67899999999999999999999999999999999999999999998854
No 435
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.38 E-value=1.3e-06 Score=86.10 Aligned_cols=87 Identities=20% Similarity=0.158 Sum_probs=68.8
Q ss_pred cccccCcccCCCCceEEEEEeC-C--CCEEEEEEeeccc--hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcC----Cc
Q 040301 435 EFNECNLLGTGSFGSVYKGTIS-D--WTNVAIKIFNLQL--ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNP----DF 504 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~----~~ 504 (524)
+|...+.||+|+||.||++... . +..||+|++.... ....+.+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3677789999999999999963 3 6789999986432 22356788999999999 599999999976432 45
Q ss_pred ceEEEcccCCCCHHHHHH
Q 040301 505 KALMWGRLLNISITIIRR 522 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~ 522 (524)
.++++||+. ++|.+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~ 97 (332)
T cd07857 81 LYLYEELME-ADLHQIIR 97 (332)
T ss_pred EEEEEeccc-CCHHHHHh
Confidence 789999986 68988874
No 436
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.38 E-value=1.2e-08 Score=82.10 Aligned_cols=59 Identities=27% Similarity=0.397 Sum_probs=26.7
Q ss_pred CCCEEEcCCCcCccccccccccCCCCEEEccCCcccCCCcccccCCCCCCEEeCCCCcCC
Q 040301 246 VLRVLDLSRNQLSGDISTIGALVDLETLSLASNQFQGPIPESVGSLISLESLDLSGNNLS 305 (524)
Q Consensus 246 ~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 305 (524)
.++.|++++|+++..|..+..++.|+.|+++.|++. ..|..+..+.++-.|+..+|.+.
T Consensus 78 t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 78 TATTLNLANNEISDVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hhhhhhcchhhhhhchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 444444444444444433444444444444444444 33444444444455555555444
No 437
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.38 E-value=8.8e-07 Score=80.23 Aligned_cols=81 Identities=14% Similarity=0.092 Sum_probs=64.3
Q ss_pred cccCCCCceEEEEEeCCCCEEEEEEeeccc--------hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEccc
Q 040301 441 LLGTGSFGSVYKGTISDWTNVAIKIFNLQL--------ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 441 ~ig~g~~g~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.||+|+||.||+|.+ ++..+++|...... ......+.+|++++..+.|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 479999999999996 56789999864321 112356789999999999988776666666777889999999
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
+|++|.+++.
T Consensus 80 ~g~~l~~~~~ 89 (199)
T TIGR03724 80 EGKPLKDVIE 89 (199)
T ss_pred CCccHHHHHh
Confidence 9999998764
No 438
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.37 E-value=1.7e-06 Score=77.63 Aligned_cols=78 Identities=15% Similarity=0.131 Sum_probs=58.4
Q ss_pred cCcccCCCCceEEEEEeCCCCEEEEEEeeccchH--------------------------HHHHHHHHHHHHhcCCCCCc
Q 040301 439 CNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLER--------------------------AFRSFDSECEVLRNVCHRNL 492 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~Ei~~l~~l~H~ni 492 (524)
...||+|+||+||+|...+|+.||||.++..... ....+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999999753210 01224588999999999998
Q ss_pred cceeEEEEcCCcceEEEcccCCCCHH
Q 040301 493 IKILSSCSNPDFKALMWGRLLNISIT 518 (524)
Q Consensus 493 v~l~~~~~~~~~~~lv~e~~~~gsL~ 518 (524)
.....+... ..++||||++++++.
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~ 105 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSP 105 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCch
Confidence 655554433 248999999988543
No 439
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.34 E-value=1e-08 Score=93.08 Aligned_cols=175 Identities=18% Similarity=0.236 Sum_probs=80.1
Q ss_pred CCCEEEccCCCCCCC-CChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccCc-Cccc-CCccccCCCCCCe
Q 040301 77 HLKALSLGSNPLGGI-LPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNND-LNGT-ISPTMGRLKQLRG 153 (524)
Q Consensus 77 ~L~~L~l~~n~l~~~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~-~~~~~~~l~~L~~ 153 (524)
.|++|||++..|+.. +-..+.... +|+.|.+-++++.+.+...+++-.+|+.|+++.+. ++.. ..-.+.+++.|.+
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~-kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCS-KLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHH-hhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 356666666555532 122222332 55555555555555555555555566666665532 2211 0112345556666
Q ss_pred EecccCcccccCCcc-ccC-CCCCCEEEccCCccc---ccCCccccCCCCCCEEEccCC-cCCCccChhccCCCCCCEEE
Q 040301 154 LSLKYNNLEGSIPYD-LCH-LKLMYGIRLTGNKLS---GHIPPCLASLTSLRELHLGSN-KLTSSIPSSLWSLEYILMIN 227 (524)
Q Consensus 154 L~L~~n~i~~~~~~~-~~~-l~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~ 227 (524)
|++++|.+....-.. +.+ -++|..|+++++.-. ..+..-...+++|.+|||++| .++...-..|..++.|++|.
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lS 344 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLS 344 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeee
Confidence 666666554322111 111 134555555554421 001111234566666666554 23332334455556666666
Q ss_pred cCCCcCcccCCcC---ccCCCCCCEEEcCC
Q 040301 228 LSSNSLNDSLPSN---IQTLKVLRVLDLSR 254 (524)
Q Consensus 228 L~~n~l~~~~~~~---~~~l~~L~~L~l~~ 254 (524)
++.|.. .+|.. +...|+|.+|++.+
T Consensus 345 lsRCY~--i~p~~~~~l~s~psl~yLdv~g 372 (419)
T KOG2120|consen 345 LSRCYD--IIPETLLELNSKPSLVYLDVFG 372 (419)
T ss_pred hhhhcC--CChHHeeeeccCcceEEEEecc
Confidence 655542 33332 23445555555443
No 440
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.26 E-value=1.9e-08 Score=91.34 Aligned_cols=238 Identities=23% Similarity=0.222 Sum_probs=150.6
Q ss_pred CCCEEEccCCCCCCCCChhHhcCc-ccccEEEeccCccccc-CCccccCC-CCCCeEEcccCcCcc-cCCccccCCCCCC
Q 040301 77 HLKALSLGSNPLGGILPPVIGNFS-ASFQNFYAFNCKLKGN-IPQEIGNL-RGLTLLSLFNNDLNG-TISPTMGRLKQLR 152 (524)
Q Consensus 77 ~L~~L~l~~n~l~~~~~~~~~~~~-~~L~~L~l~~n~l~~~-~~~~~~~l-~~L~~L~l~~n~l~~-~~~~~~~~l~~L~ 152 (524)
.=+.||+.+-+|. |..++.+. +....+.+........ +...+.-+ ++|++|||++..++- .+-..+..+.+|+
T Consensus 137 lW~~lDl~~r~i~---p~~l~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~kLk 213 (419)
T KOG2120|consen 137 LWQTLDLTGRNIH---PDVLGRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSKLK 213 (419)
T ss_pred ceeeeccCCCccC---hhHHHHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHhhh
Confidence 3478888888766 44444432 2344455544333221 11112222 468888988887762 2334566788889
Q ss_pred eEecccCcccccCCccccCCCCCCEEEccCCc-cccc-CCccccCCCCCCEEEccCCcCCCccC-hhccC-CCCCCEEEc
Q 040301 153 GLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNK-LSGH-IPPCLASLTSLRELHLGSNKLTSSIP-SSLWS-LEYILMINL 228 (524)
Q Consensus 153 ~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~-l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~-l~~L~~L~L 228 (524)
.|.+.++++.+.+...+.+-.+|+.|+++.+. ++.. ..-.+.+++.|..|+++.|.+....- ..+.. -++|..|++
T Consensus 214 ~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNl 293 (419)
T KOG2120|consen 214 NLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNL 293 (419)
T ss_pred hccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchhhhhhhh
Confidence 99999998888777788888889999888764 3211 11235678889999999887664321 12222 357888899
Q ss_pred CCCcCc---ccCCcCccCCCCCCEEEcCCCcCcccc--ccccccCCCCEEEccCCcccCCCccc---ccCCCCCCEEeCC
Q 040301 229 SSNSLN---DSLPSNIQTLKVLRVLDLSRNQLSGDI--STIGALVDLETLSLASNQFQGPIPES---VGSLISLESLDLS 300 (524)
Q Consensus 229 ~~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~---~~~l~~L~~L~l~ 300 (524)
+++.-. ..+..-...+|+|.+|||+.|..-... ..+..++.|++|.++.|-. .+|.. +...|+|.+||+.
T Consensus 294 sG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~ 371 (419)
T KOG2120|consen 294 SGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVF 371 (419)
T ss_pred hhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEec
Confidence 886421 123333457899999999987543222 5677889999999998843 45544 4778999999998
Q ss_pred CCcCCCCCcccccCCCCCC
Q 040301 301 GNNLSGKIPKSLETLSHLK 319 (524)
Q Consensus 301 ~N~l~~~~~~~~~~l~~L~ 319 (524)
+.--.+...-....+++++
T Consensus 372 g~vsdt~mel~~e~~~~lk 390 (419)
T KOG2120|consen 372 GCVSDTTMELLKEMLSHLK 390 (419)
T ss_pred cccCchHHHHHHHhCcccc
Confidence 7754433322333445544
No 441
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.24 E-value=3.2e-08 Score=79.64 Aligned_cols=83 Identities=23% Similarity=0.410 Sum_probs=43.1
Q ss_pred CCCCEEEccCCcCCCccChhcc-CCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCccccccccccCCCCEEEc
Q 040301 197 TSLRELHLGSNKLTSSIPSSLW-SLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDISTIGALVDLETLSL 275 (524)
Q Consensus 197 ~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~L 275 (524)
..|+..++++|.+. .+|..|. ..+.++.|+|++|.++ .+|..+..++.|+.|+++.|.+...+..+..+.+|..|+.
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds 130 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDS 130 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhcC
Confidence 34444455555554 2233332 3335555555555555 3455555555566666666555555544444555555565
Q ss_pred cCCccc
Q 040301 276 ASNQFQ 281 (524)
Q Consensus 276 ~~N~l~ 281 (524)
.+|.+.
T Consensus 131 ~~na~~ 136 (177)
T KOG4579|consen 131 PENARA 136 (177)
T ss_pred CCCccc
Confidence 555554
No 442
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.23 E-value=2.6e-07 Score=84.16 Aligned_cols=182 Identities=21% Similarity=0.191 Sum_probs=88.8
Q ss_pred CCCeEecccCcccc--cCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcCCC-ccChhccCCCCCCEE
Q 040301 150 QLRGLSLKYNNLEG--SIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSLRELHLGSNKLTS-SIPSSLWSLEYILMI 226 (524)
Q Consensus 150 ~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L 226 (524)
.++++||.+|.|+. .+...+.++|.|+.|+++.|++...+...-.-..+|+.|-|.+..+.- .....+..+|.++.|
T Consensus 72 ~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtel 151 (418)
T KOG2982|consen 72 DVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTEL 151 (418)
T ss_pred hhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhh
Confidence 34444444444441 222233344444444444444432211111122344455444444331 122333444555555
Q ss_pred EcCCCcCcc--cCCcCcc-CCCCCCEEEcCCCcCcccc---ccccccCCCCEEEccCCcccCCC-cccccCCCCCCEEeC
Q 040301 227 NLSSNSLND--SLPSNIQ-TLKVLRVLDLSRNQLSGDI---STIGALVDLETLSLASNQFQGPI-PESVGSLISLESLDL 299 (524)
Q Consensus 227 ~L~~n~l~~--~~~~~~~-~l~~L~~L~l~~n~l~~~~---~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l 299 (524)
.++.|.+.. ....... .-+.+++|++..|...-.. ..-..+|++..+.+..|++.... ...+..+|.+..|+|
T Consensus 152 HmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL 231 (418)
T KOG2982|consen 152 HMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNL 231 (418)
T ss_pred hhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhh
Confidence 555552211 0111111 1235555655555432111 11234577888888888776432 234556677778888
Q ss_pred CCCcCCC-CCcccccCCCCCCeEEccCCcCccc
Q 040301 300 SGNNLSG-KIPKSLETLSHLKQFNASHNRLEGK 331 (524)
Q Consensus 300 ~~N~l~~-~~~~~~~~l~~L~~l~l~~n~l~~~ 331 (524)
+.|+|.. ..-+.+..+++|..+.+++||+...
T Consensus 232 ~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~ 264 (418)
T KOG2982|consen 232 GANNIDSWASVDALNGFPQLVDLRVSENPLSDP 264 (418)
T ss_pred cccccccHHHHHHHcCCchhheeeccCCccccc
Confidence 8888753 2235667788888888888887653
No 443
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.23 E-value=9.6e-07 Score=57.57 Aligned_cols=39 Identities=28% Similarity=0.403 Sum_probs=27.2
Q ss_pred CCccEEEccCCcccccCCcccccccCCCEEEccccccCCC
Q 040301 20 QIYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTWNNLTTE 59 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~ 59 (524)
++|++|++++|+|+ .+|..+++|++|++|++++|+++++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~i 39 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISDI 39 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSBE
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCCC
Confidence 46777888888777 5565677777888888888777655
No 444
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.23 E-value=1.8e-07 Score=84.12 Aligned_cols=90 Identities=18% Similarity=0.186 Sum_probs=55.9
Q ss_pred CCCCCCCCEEEccCCCCCCCCC----hhHhcCcccccEEEeccCccc---ccCC-------ccccCCCCCCeEEcccCcC
Q 040301 72 LTNCRHLKALSLGSNPLGGILP----PVIGNFSASFQNFYAFNCKLK---GNIP-------QEIGNLRGLTLLSLFNNDL 137 (524)
Q Consensus 72 ~~~l~~L~~L~l~~n~l~~~~~----~~~~~~~~~L~~L~l~~n~l~---~~~~-------~~~~~l~~L~~L~l~~n~l 137 (524)
+.-+..++.+|||+|.|..... ..+.+-. +|+..+++.-... ..++ +.+.++|+|+..+||.|.+
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~-~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAf 104 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVR-NLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAF 104 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhc-ceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeecccccc
Confidence 3446778888999988875533 3344433 6666666653221 1222 3345677888888888877
Q ss_pred cccCCccc----cCCCCCCeEecccCccc
Q 040301 138 NGTISPTM----GRLKQLRGLSLKYNNLE 162 (524)
Q Consensus 138 ~~~~~~~~----~~l~~L~~L~L~~n~i~ 162 (524)
....|+.+ +.-+.|.+|.+++|.+.
T Consensus 105 g~~~~e~L~d~is~~t~l~HL~l~NnGlG 133 (388)
T COG5238 105 GSEFPEELGDLISSSTDLVHLKLNNNGLG 133 (388)
T ss_pred CcccchHHHHHHhcCCCceeEEeecCCCC
Confidence 76555543 44566777777777765
No 445
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.21 E-value=2e-06 Score=81.34 Aligned_cols=97 Identities=15% Similarity=0.214 Sum_probs=76.7
Q ss_pred hhhhhhhhccccccCcccCCCCceEEEEEeCC------CCEEEEEEeeccc-hHHHHHHHHHHHHHhcCCCCCccceeEE
Q 040301 426 YLDIQRATDEFNECNLLGTGSFGSVYKGTISD------WTNVAIKIFNLQL-ERAFRSFDSECEVLRNVCHRNLIKILSS 498 (524)
Q Consensus 426 ~~~l~~~~~~~~~~~~ig~g~~g~v~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~H~niv~l~~~ 498 (524)
.+++......++....+-+|.||.||+|.+.+ .+.|-||.++... .-+...+.+|.-.+..+.|||+.+..+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 45666666778888888999999999997632 2345567665544 2345678899999999999999999999
Q ss_pred EEc-CCcceEEEcccCCCCHHHHHH
Q 040301 499 CSN-PDFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 499 ~~~-~~~~~lv~e~~~~gsL~~~l~ 522 (524)
+.+ .+..+++|.++.-|+|..||+
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~ 380 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQ 380 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHH
Confidence 876 456899999999999999997
No 446
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.18 E-value=5.6e-06 Score=74.83 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=65.7
Q ss_pred hhhhhhhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccch----------------------HHHHHHHHHHHHH
Q 040301 427 LDIQRATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLE----------------------RAFRSFDSECEVL 484 (524)
Q Consensus 427 ~~l~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~Ei~~l 484 (524)
+++...-..|...+.||+|+||.||++..++|+.+|||+++.... .....+.+|+.++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444444778899999999999999987899999998754220 0112367889999
Q ss_pred hcCCCCC--ccceeEEEEcCCcceEEEcccCCCCHHHHH
Q 040301 485 RNVCHRN--LIKILSSCSNPDFKALMWGRLLNISITIIR 521 (524)
Q Consensus 485 ~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 521 (524)
..+.|++ +++.++ ....++||||+++++|.+..
T Consensus 88 ~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~ 122 (198)
T cd05144 88 KALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVR 122 (198)
T ss_pred HHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcc
Confidence 9998874 444443 34569999999999987653
No 447
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.17 E-value=2.4e-08 Score=88.63 Aligned_cols=88 Identities=18% Similarity=0.293 Sum_probs=68.7
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeec--cchHHHHHHHHHHHHHhcCCCCCccceeEEEEcC-------
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNL--QLERAFRSFDSECEVLRNVCHRNLIKILSSCSNP------- 502 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------- 502 (524)
.+.|+...++|+|.||.|++|+. .+|+.||+|++-- ...+-...-.+|++++..+.|+|++.+++.|...
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 35677788999999999999996 4677899887632 2222234457899999999999999999988652
Q ss_pred -CcceEEEcccCCCCHHHHH
Q 040301 503 -DFKALMWGRLLNISITIIR 521 (524)
Q Consensus 503 -~~~~lv~e~~~~gsL~~~l 521 (524)
..+|+||.+|+. +|...|
T Consensus 96 r~t~ylVf~~ceh-DLaGlL 114 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLL 114 (376)
T ss_pred cceeeeeHHHhhh-hHHHHh
Confidence 358999999996 777665
No 448
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.15 E-value=1.7e-06 Score=82.66 Aligned_cols=92 Identities=25% Similarity=0.263 Sum_probs=78.0
Q ss_pred hhhhccccccCcccCCCCceEEEEEe-C---CCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCc
Q 040301 430 QRATDEFNECNLLGTGSFGSVYKGTI-S---DWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDF 504 (524)
Q Consensus 430 ~~~~~~~~~~~~ig~g~~g~v~~~~~-~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~ 504 (524)
......|..+++||+|.|+.||+++. . ..+.||+|.+.... ......+|++.|.++ .+.||+++.+++..++.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 34455688899999999999999995 2 45779999997643 235578999999999 68999999999999999
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
..+|+||++.-+..+++++
T Consensus 110 v~ivlp~~~H~~f~~l~~~ 128 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS 128 (418)
T ss_pred eEEEecccCccCHHHHHhc
Confidence 9999999999999888765
No 449
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.14 E-value=1.9e-06 Score=74.53 Aligned_cols=94 Identities=13% Similarity=0.113 Sum_probs=77.0
Q ss_pred hhhhhccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcc
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFK 505 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 505 (524)
++...++......+|+|+||.|-+.++ .+|+..|+|++...- .+..++..+|+.+..+. ..|.+|.+||.+......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 445555666677899999999988885 689999999997654 44566788899876554 799999999999999999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
||.||.|.- ||..|.++
T Consensus 121 wIcME~M~t-Sldkfy~~ 137 (282)
T KOG0984|consen 121 WICMELMDT-SLDKFYRK 137 (282)
T ss_pred EEeHHHhhh-hHHHHHHH
Confidence 999999985 88888775
No 450
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.10 E-value=8.5e-07 Score=80.97 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=68.4
Q ss_pred hhcccccc-CcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhc-CCCCCccceeEEEEc----CCc
Q 040301 432 ATDEFNEC-NLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRN-VCHRNLIKILSSCSN----PDF 504 (524)
Q Consensus 432 ~~~~~~~~-~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~----~~~ 504 (524)
.+++|++. .++|-|-.|.|..+.. .+|+.+|+|.+... ....+|++..-. -.|||||.++++|.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45566653 5789999999999986 57888999987432 345578987544 479999999998865 356
Q ss_pred ceEEEcccCCCCHHHHHHh
Q 040301 505 KALMWGRLLNISITIIRRH 523 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~~ 523 (524)
+.+|||+|+||.|+..+++
T Consensus 134 LLiVmE~meGGeLfsriq~ 152 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQD 152 (400)
T ss_pred eEeeeecccchHHHHHHHH
Confidence 8899999999999998864
No 451
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.08 E-value=6e-07 Score=85.27 Aligned_cols=92 Identities=21% Similarity=0.159 Sum_probs=72.8
Q ss_pred hccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccc---hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQL---ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~l 507 (524)
..+|....++|+|+||.|..|..+ +.+.||||++++.. ..+.+--..|-++|.-- +-|.++++..+|++-+.+|.
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 357888899999999999999864 35679999997643 11222234566777665 57899999999999999999
Q ss_pred EEcccCCCCHHHHHHhC
Q 040301 508 MWGRLLNISITIIRRHL 524 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~~ 524 (524)
||||+.||+|-..|+++
T Consensus 428 VMEyvnGGDLMyhiQQ~ 444 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQV 444 (683)
T ss_pred EEEEecCchhhhHHHHh
Confidence 99999999999888764
No 452
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.08 E-value=8.2e-06 Score=70.52 Aligned_cols=84 Identities=19% Similarity=0.125 Sum_probs=44.8
Q ss_pred cccEEEeccCcccccCCccccCCCCCCeEEcccCcCcccC-CccccCCCCCCeEecccCcccccCC---ccccCCCCCCE
Q 040301 102 SFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNNDLNGTI-SPTMGRLKQLRGLSLKYNNLEGSIP---YDLCHLKLMYG 177 (524)
Q Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~---~~~~~l~~L~~ 177 (524)
.|.+|.+.+|.|+.+.|.--.-+++|+.|.|.+|.+.... -..+..+|+|++|.+-+|.++..-. ..+..+|+|+.
T Consensus 65 rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~ 144 (233)
T KOG1644|consen 65 RLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRT 144 (233)
T ss_pred ccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceE
Confidence 3444444444444444433334455666666666554221 1234556677777777776663221 24566777777
Q ss_pred EEccCCcc
Q 040301 178 IRLTGNKL 185 (524)
Q Consensus 178 L~l~~n~l 185 (524)
||...-..
T Consensus 145 LDF~kVt~ 152 (233)
T KOG1644|consen 145 LDFQKVTR 152 (233)
T ss_pred eehhhhhH
Confidence 77766443
No 453
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.03 E-value=9.6e-06 Score=79.00 Aligned_cols=88 Identities=15% Similarity=0.214 Sum_probs=70.5
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCC-----C---CCccceeEEEEc---
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVC-----H---RNLIKILSSCSN--- 501 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----H---~niv~l~~~~~~--- 501 (524)
+.|-..+++|=|.|++||.|.. .+.+.||+|+.+... ...+....||++|+.++ | ..||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 5688889999999999999995 567889999986432 34456778999998873 3 369999999976
Q ss_pred -CCcceEEEcccCCCCHHHHHHh
Q 040301 502 -PDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 502 -~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
+..+|||+||+ |-+|..+|++
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~ 178 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKY 178 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHH
Confidence 45799999988 5689888864
No 454
>smart00090 RIO RIO-like kinase.
Probab=98.02 E-value=9e-06 Score=75.41 Aligned_cols=88 Identities=13% Similarity=0.004 Sum_probs=62.6
Q ss_pred hhhhhccccccCcccCCCCceEEEEE--eCCCCEEEEEEeeccch------------------------HHHHHHHHHHH
Q 040301 429 IQRATDEFNECNLLGTGSFGSVYKGT--ISDWTNVAIKIFNLQLE------------------------RAFRSFDSECE 482 (524)
Q Consensus 429 l~~~~~~~~~~~~ig~g~~g~v~~~~--~~~~~~vavK~~~~~~~------------------------~~~~~~~~Ei~ 482 (524)
+..--..|.+.+.||+|+||.||+|. ..+|+.||+|.+..... .....+.+|++
T Consensus 23 ~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 102 (237)
T smart00090 23 LLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR 102 (237)
T ss_pred HHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence 33333457888999999999999998 46899999999864320 01123578999
Q ss_pred HHhcCCCCC--ccceeEEEEcCCcceEEEcccCCCCHHHH
Q 040301 483 VLRNVCHRN--LIKILSSCSNPDFKALMWGRLLNISITII 520 (524)
Q Consensus 483 ~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 520 (524)
++.++.+.. +.+.+++ ...++||||++++++..+
T Consensus 103 ~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~ 138 (237)
T smart00090 103 NLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAP 138 (237)
T ss_pred HHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccc
Confidence 999997633 3344432 235899999999887654
No 455
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.02 E-value=1.1e-05 Score=69.86 Aligned_cols=57 Identities=23% Similarity=0.240 Sum_probs=23.1
Q ss_pred CEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCc
Q 040301 200 RELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLS 258 (524)
Q Consensus 200 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 258 (524)
..+||++|.+.. ...|..+++|..|.+.+|+|+..-|.--.-+++|+.|.+++|++.
T Consensus 45 d~iDLtdNdl~~--l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~ 101 (233)
T KOG1644|consen 45 DAIDLTDNDLRK--LDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQ 101 (233)
T ss_pred ceecccccchhh--cccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchh
Confidence 344444444431 123334444444444444444333322222344444444444443
No 456
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.99 E-value=2.8e-05 Score=76.14 Aligned_cols=17 Identities=12% Similarity=0.087 Sum_probs=8.4
Q ss_pred ccCCCEEEccccccCCC
Q 040301 43 LRHLSSLLLTWNNLTTE 59 (524)
Q Consensus 43 l~~L~~L~l~~n~l~~~ 59 (524)
+.+++.|++++|.++.+
T Consensus 51 ~~~l~~L~Is~c~L~sL 67 (426)
T PRK15386 51 ARASGRLYIKDCDIESL 67 (426)
T ss_pred hcCCCEEEeCCCCCccc
Confidence 34455555555544443
No 457
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=97.99 E-value=4.8e-06 Score=75.16 Aligned_cols=86 Identities=12% Similarity=0.097 Sum_probs=68.1
Q ss_pred ccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc-hHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEccc
Q 040301 436 FNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL-ERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRL 512 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~ 512 (524)
.+....+|+|..|+||++++ .+|..+|||.+.+.. +...++....+.++... +.|.||+.+|||..+..+++-||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 34456799999999999997 468889999997755 44566777788776665 4899999999999999999999988
Q ss_pred CCCCHHHHHH
Q 040301 513 LNISITIIRR 522 (524)
Q Consensus 513 ~~gsL~~~l~ 522 (524)
.. -++.+++
T Consensus 174 s~-C~ekLlk 182 (391)
T KOG0983|consen 174 ST-CAEKLLK 182 (391)
T ss_pred HH-HHHHHHH
Confidence 53 4444444
No 458
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=97.98 E-value=2e-05 Score=82.75 Aligned_cols=88 Identities=19% Similarity=0.277 Sum_probs=58.7
Q ss_pred hhccccccCcccCCCCceEEEEEe-CC----CCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEE------EE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTI-SD----WTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSS------CS 500 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~-~~----~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~------~~ 500 (524)
..++|+..+.||+|+||.||+|+. .+ +..||+|++..... .+.+..| .+....+.++..+... +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999997 34 68899998864332 1111111 1122222222222221 24
Q ss_pred cCCcceEEEcccCCCCHHHHHHh
Q 040301 501 NPDFKALMWGRLLNISITIIRRH 523 (524)
Q Consensus 501 ~~~~~~lv~e~~~~gsL~~~l~~ 523 (524)
.+...++||||+++|+|.+++++
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~ 228 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQS 228 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHh
Confidence 56789999999999999998853
No 459
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.97 E-value=5.2e-06 Score=85.89 Aligned_cols=83 Identities=24% Similarity=0.340 Sum_probs=67.4
Q ss_pred ccccCcccCCCCce-EEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcccC
Q 040301 436 FNECNLLGTGSFGS-VYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGRLL 513 (524)
Q Consensus 436 ~~~~~~ig~g~~g~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 513 (524)
|...+.+|.|.-|+ ||+|.+ .|+.||||++-... ..-..+||..++.- .|||||++++.-.+++..||..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 33445678888885 899998 67899999985433 23456899999988 69999999988888899999999998
Q ss_pred CCCHHHHHHh
Q 040301 514 NISITIIRRH 523 (524)
Q Consensus 514 ~gsL~~~l~~ 523 (524)
- +|.|++..
T Consensus 587 ~-sL~dlie~ 595 (903)
T KOG1027|consen 587 C-SLQDLIES 595 (903)
T ss_pred h-hHHHHHhc
Confidence 4 99999863
No 460
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.97 E-value=1.7e-06 Score=79.99 Aligned_cols=90 Identities=13% Similarity=0.140 Sum_probs=71.0
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccch---HHHHHHHHHHHHHhc-CCCCCccceeEEEEcCCcceE
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLE---RAFRSFDSECEVLRN-VCHRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~l 507 (524)
-.+|....+||+|+|++|..+++ ++.+.||+|++++... .+..=...|-.++.. -+||.+|.+..||+++..++.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 35788899999999999999996 5678899999976432 222223445555544 489999999999999999999
Q ss_pred EEcccCCCCHHHHHH
Q 040301 508 MWGRLLNISITIIRR 522 (524)
Q Consensus 508 v~e~~~~gsL~~~l~ 522 (524)
|.||++||+|--.++
T Consensus 329 vieyv~ggdlmfhmq 343 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ 343 (593)
T ss_pred EEEEecCcceeeehh
Confidence 999999999876554
No 461
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.95 E-value=7e-06 Score=53.51 Aligned_cols=38 Identities=32% Similarity=0.499 Sum_probs=27.8
Q ss_pred cCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCC
Q 040301 44 RHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGG 90 (524)
Q Consensus 44 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 90 (524)
++|++|++++|+|++++ ..+++|++|++|++++|+++.
T Consensus 1 ~~L~~L~l~~N~i~~l~---------~~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 1 KNLEELDLSNNQITDLP---------PELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp TT-SEEEETSSS-SSHG---------GHGTTCTTSSEEEETSSCCSB
T ss_pred CcceEEEccCCCCcccC---------chHhCCCCCCEEEecCCCCCC
Confidence 47888888888888653 447888888888888888774
No 462
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.93 E-value=1.6e-05 Score=68.02 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=65.1
Q ss_pred ccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCC--CCccceeEEEEcCCcceEEEcccCCC
Q 040301 438 ECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCH--RNLIKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 438 ~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~g 515 (524)
..+.+|+|.++.||++...+ ..+++|....... ...+.+|+..++.++| ..+++++++...++..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 34678999999999999754 6789998865433 4678899999999976 58999999888888999999999988
Q ss_pred CHH
Q 040301 516 SIT 518 (524)
Q Consensus 516 sL~ 518 (524)
.+.
T Consensus 79 ~~~ 81 (155)
T cd05120 79 TLD 81 (155)
T ss_pred ecc
Confidence 775
No 463
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.92 E-value=5e-05 Score=74.47 Aligned_cols=53 Identities=21% Similarity=0.314 Sum_probs=22.7
Q ss_pred CCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccCCccccCCCCCCeEEcccC
Q 040301 76 RHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNIPQEIGNLRGLTLLSLFNN 135 (524)
Q Consensus 76 ~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 135 (524)
.+++.|++++|.+.. +| .++.+|+.|.+.+|.-...+|..+ .++|++|++++|
T Consensus 52 ~~l~~L~Is~c~L~s-LP----~LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 52 RASGRLYIKDCDIES-LP----VLPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred cCCCEEEeCCCCCcc-cC----CCCCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 445555555554442 22 123345555555433322333322 134555555554
No 464
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=97.86 E-value=1.4e-06 Score=85.01 Aligned_cols=91 Identities=15% Similarity=0.243 Sum_probs=76.9
Q ss_pred ccccccCcccCCCCceEEEEEeCCCC-EEEEEEeeccc---hHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISDWT-NVAIKIFNLQL---ERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~~~-~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~ 509 (524)
.+++....+|-|+||.|-.+...... .+|+|.+++.. ..+.+....|-.+|..++.|.||++|..|.+..++|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45566678999999999998875433 48999987644 345667889999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHhC
Q 040301 510 GRLLNISITIIRRHL 524 (524)
Q Consensus 510 e~~~~gsL~~~l~~~ 524 (524)
|-|-||.+-..||++
T Consensus 500 EaClGGElWTiLrdR 514 (732)
T KOG0614|consen 500 EACLGGELWTILRDR 514 (732)
T ss_pred HhhcCchhhhhhhhc
Confidence 999999999888763
No 465
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.85 E-value=1.6e-06 Score=78.02 Aligned_cols=86 Identities=17% Similarity=0.185 Sum_probs=68.9
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC-----Ccce
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP-----DFKA 506 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~-----~~~~ 506 (524)
+.+.++.||.|.||.||.++. ++|+.||.|++.... -...+.+.+|++++.-++|.|++..++..+.. +++|
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 456778999999999999997 579999999986432 23456788999999999999999998877654 3678
Q ss_pred EEEcccCCCCHHHHH
Q 040301 507 LMWGRLLNISITIIR 521 (524)
Q Consensus 507 lv~e~~~~gsL~~~l 521 (524)
+|+|.|. .+|+..|
T Consensus 134 V~TELmQ-SDLHKII 147 (449)
T KOG0664|consen 134 VLTELMQ-SDLHKII 147 (449)
T ss_pred HHHHHHH-hhhhhee
Confidence 9999886 4776543
No 466
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.82 E-value=3.2e-05 Score=78.51 Aligned_cols=84 Identities=14% Similarity=0.138 Sum_probs=56.8
Q ss_pred cCcccCCCCceEEEEEeCCCCEEEEEEeeccchHH----------------------------------------HHHHH
Q 040301 439 CNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERA----------------------------------------FRSFD 478 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~ 478 (524)
.+.+|+|++|+||+|++.+|+.||||+..+..... .-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36899999999999999999999999986542110 00255
Q ss_pred HHHHHHhcC----CCCCccceeEEEEc-CCcceEEEcccCCCCHHHHHH
Q 040301 479 SECEVLRNV----CHRNLIKILSSCSN-PDFKALMWGRLLNISITIIRR 522 (524)
Q Consensus 479 ~Ei~~l~~l----~H~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~ 522 (524)
+|.+.+.++ .|.+-+.....+.+ ....+|||||++|++|.++.+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~ 250 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAA 250 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHH
Confidence 566655554 23333333333322 345799999999999987653
No 467
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.82 E-value=5.7e-06 Score=74.60 Aligned_cols=105 Identities=22% Similarity=0.207 Sum_probs=64.6
Q ss_pred CccEEEccCC-cccccCCcccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCC--CCCCCCChhHh
Q 040301 21 IYWVMDLSSN-SFSGHIPNTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSN--PLGGILPPVIG 97 (524)
Q Consensus 21 ~l~~Ldls~n-~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n--~l~~~~~~~~~ 97 (524)
++..+.+-.+ ...|.+......+.+|+.|++.+..++.+ ..+..|++|++|+++.| .+.+.++-...
T Consensus 19 ~v~~l~lD~~~s~~g~~~gl~d~~~~le~ls~~n~gltt~----------~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e 88 (260)
T KOG2739|consen 19 QVDELFLDNARSGAGKLGGLTDEFVELELLSVINVGLTTL----------TNFPKLPKLKKLELSDNYRRVSGGLEVLAE 88 (260)
T ss_pred hhhhhhcchhhhcCCCcccccccccchhhhhhhccceeec----------ccCCCcchhhhhcccCCcccccccceehhh
Confidence 3444444333 23345666777788999999999998876 56677889999999999 55554444444
Q ss_pred cCcccccEEEeccCcccccCCcc---ccCCCCCCeEEcccCcCc
Q 040301 98 NFSASFQNFYAFNCKLKGNIPQE---IGNLRGLTLLSLFNNDLN 138 (524)
Q Consensus 98 ~~~~~L~~L~l~~n~l~~~~~~~---~~~l~~L~~L~l~~n~l~ 138 (524)
..+ +|+++++++|++.. +.. +..+.+|..|++.+|..+
T Consensus 89 ~~P-~l~~l~ls~Nki~~--lstl~pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 89 KAP-NLKVLNLSGNKIKD--LSTLRPLKELENLKSLDLFNCSVT 129 (260)
T ss_pred hCC-ceeEEeecCCcccc--ccccchhhhhcchhhhhcccCCcc
Confidence 443 66666666666642 222 233444455555555443
No 468
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.80 E-value=3.8e-06 Score=75.61 Aligned_cols=84 Identities=21% Similarity=0.369 Sum_probs=69.5
Q ss_pred cCcccCCCCceEEEEEeCCCCEEEEEEeec--cchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCC
Q 040301 439 CNLLGTGSFGSVYKGTISDWTNVAIKIFNL--QLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNIS 516 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 516 (524)
..++.+...|..|+|+++. ..+++|++.. ......++|..|...++-+.||||+..+|.|..+....++..||+.||
T Consensus 195 ~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 3467888899999999854 4556676643 223456789999999999999999999999999999999999999999
Q ss_pred HHHHHHh
Q 040301 517 ITIIRRH 523 (524)
Q Consensus 517 L~~~l~~ 523 (524)
|+..+++
T Consensus 274 lynvlhe 280 (448)
T KOG0195|consen 274 LYNVLHE 280 (448)
T ss_pred HHHHHhc
Confidence 9998864
No 469
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.78 E-value=1.9e-05 Score=81.17 Aligned_cols=88 Identities=13% Similarity=0.172 Sum_probs=59.1
Q ss_pred hhccccccCcccCCCCceEEEEEeCC-CCEEEEEEeeccchH----------------------------------HHH-
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGTISD-WTNVAIKIFNLQLER----------------------------------AFR- 475 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~- 475 (524)
.-.+|+. +.+|+|++|+||+|++++ |+.||||++.+.... ..+
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3445776 789999999999999876 999999999754210 011
Q ss_pred -----HHHHHHHHHhcC----CCCCccceeEEEEc-CCcceEEEcccCCCCHHHH
Q 040301 476 -----SFDSECEVLRNV----CHRNLIKILSSCSN-PDFKALMWGRLLNISITII 520 (524)
Q Consensus 476 -----~~~~Ei~~l~~l----~H~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~ 520 (524)
+|.+|...+.++ .+.+.+.+...+.+ ....+|||||++|+.+.++
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~ 251 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV 251 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence 244555444444 24444444444433 3457899999999999764
No 470
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=97.78 E-value=1.4e-05 Score=75.69 Aligned_cols=89 Identities=20% Similarity=0.227 Sum_probs=72.6
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCC--C----CccceeEEEEcCCcc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCH--R----NLIKILSSCSNPDFK 505 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H--~----niv~l~~~~~~~~~~ 505 (524)
+..|.+...+|+|.||.|-.+.. ..+..||+|+++...+ -.++..-|++++.++.+ | .+|++.++|.-.+..
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 56799999999999999999986 3578899999975432 34566789999999943 2 478888889889999
Q ss_pred eEEEcccCCCCHHHHHHh
Q 040301 506 ALMWGRLLNISITIIRRH 523 (524)
Q Consensus 506 ~lv~e~~~~gsL~~~l~~ 523 (524)
|||+|.+ |-|+.+||++
T Consensus 167 Civfell-G~S~~dFlk~ 183 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKE 183 (415)
T ss_pred EEEEecc-ChhHHHHhcc
Confidence 9999977 4599999975
No 471
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.69 E-value=2.2e-05 Score=70.98 Aligned_cols=87 Identities=15% Similarity=0.130 Sum_probs=69.9
Q ss_pred ccccccCcccCCCCceEEEEEeC-CCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeE-EEEcCCcceEEEc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTIS-DWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILS-SCSNPDFKALMWG 510 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~-~~~~~~~~~lv~e 510 (524)
+.|.+.+.+|+|.||.+-.+.++ ..+.+++|.+++... ..++|.+|...--.+ .|.||+.-|+ .|++.+....++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 56888999999999999999974 567799999876543 457899998764455 5899997776 5677788889999
Q ss_pred ccCCCCHHHHH
Q 040301 511 RLLNISITIIR 521 (524)
Q Consensus 511 ~~~~gsL~~~l 521 (524)
|++.|+|..-+
T Consensus 103 ~aP~gdL~snv 113 (378)
T KOG1345|consen 103 FAPRGDLRSNV 113 (378)
T ss_pred cCccchhhhhc
Confidence 99999998643
No 472
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.68 E-value=0.00018 Score=64.35 Aligned_cols=80 Identities=14% Similarity=0.002 Sum_probs=60.4
Q ss_pred cccCcccCCCCceEEEEEeCCCCEEEEEEeeccch----HHHHHHHHHHHHHhcCC-CCCccceeEEEEcCCcceEEEcc
Q 040301 437 NECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLE----RAFRSFDSECEVLRNVC-HRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 437 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~----~~~~~~~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
..+..+++|+||+||.+.- .+..++.+.+..... -....|.+|+++|+++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3557899999999996665 567777776654321 11335889999999995 5889999886 447999999
Q ss_pred cCCCCHHHHH
Q 040301 512 LLNISITIIR 521 (524)
Q Consensus 512 ~~~gsL~~~l 521 (524)
++|.+|.+.+
T Consensus 80 I~G~~L~~~~ 89 (218)
T PRK12274 80 LAGAAMYQRP 89 (218)
T ss_pred ecCccHHhhh
Confidence 9999987643
No 473
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.66 E-value=2.8e-05 Score=78.46 Aligned_cols=87 Identities=21% Similarity=0.129 Sum_probs=72.6
Q ss_pred hccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEc
Q 040301 433 TDEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWG 510 (524)
Q Consensus 433 ~~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 510 (524)
+++|.....+|.|+|+.|-.+.. ++++.+|||++.... .+-.+|+.++... +||||+++.+.+.++.+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 56788888899999999999985 577889999997652 2233577676655 79999999999999999999999
Q ss_pred ccCCCCHHHHHHh
Q 040301 511 RLLNISITIIRRH 523 (524)
Q Consensus 511 ~~~~gsL~~~l~~ 523 (524)
++.||-+.+.++.
T Consensus 397 ~l~g~ell~ri~~ 409 (612)
T KOG0603|consen 397 LLDGGELLRRIRS 409 (612)
T ss_pred hccccHHHHHHHh
Confidence 9999999887764
No 474
>PHA02882 putative serine/threonine kinase; Provisional
Probab=97.62 E-value=0.00023 Score=68.74 Aligned_cols=88 Identities=22% Similarity=0.274 Sum_probs=58.7
Q ss_pred ccccccCcccCCCCceEEEEEeCC----CCEEEEEEeeccchH--H---------HHHHHHHHHHHhcCCCCCccceeEE
Q 040301 434 DEFNECNLLGTGSFGSVYKGTISD----WTNVAIKIFNLQLER--A---------FRSFDSECEVLRNVCHRNLIKILSS 498 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~~~----~~~vavK~~~~~~~~--~---------~~~~~~Ei~~l~~l~H~niv~l~~~ 498 (524)
..|.+.+.||+|+||.||+|...+ +..+|+|........ . ......+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999999643 345666654322110 0 1122344455677899999999998
Q ss_pred EEcCC----cceEEEcccCCCCHHHHHH
Q 040301 499 CSNPD----FKALMWGRLLNISITIIRR 522 (524)
Q Consensus 499 ~~~~~----~~~lv~e~~~~gsL~~~l~ 522 (524)
+.... ..++++|++.. ++.+.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 118 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFK 118 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHH
Confidence 76543 34788887753 6655543
No 475
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.55 E-value=0.00023 Score=59.18 Aligned_cols=106 Identities=22% Similarity=0.299 Sum_probs=41.1
Q ss_pred cccccccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccC
Q 040301 38 NTFGNLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNI 117 (524)
Q Consensus 38 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 117 (524)
..|.+..+|+.+.+.. .++.+.. ..|.++++|+.+++.++ +.......|.... +++.+.+.+ .+....
T Consensus 6 ~~F~~~~~l~~i~~~~-~~~~I~~--------~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~-~l~~i~~~~-~~~~i~ 73 (129)
T PF13306_consen 6 NAFYNCSNLESITFPN-TIKKIGE--------NAFSNCTSLKSINFPNN-LTSIGDNAFSNCK-SLESITFPN-NLKSIG 73 (129)
T ss_dssp TTTTT-TT--EEEETS-T--EE-T--------TTTTT-TT-SEEEESST-TSCE-TTTTTT-T-T-EEEEETS-TT-EE-
T ss_pred HHHhCCCCCCEEEECC-CeeEeCh--------hhccccccccccccccc-ccccceeeeeccc-ccccccccc-cccccc
Confidence 3455556666666653 4554443 55566656666666553 4433333444433 444444433 222223
Q ss_pred CccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecc
Q 040301 118 PQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLK 157 (524)
Q Consensus 118 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 157 (524)
...|.+.++|+.+++..+ +..+....|.++ +|+.+.+.
T Consensus 74 ~~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 74 DNAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp TTTTTT-TTECEEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred cccccccccccccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 334444555555555433 333333444444 55555444
No 476
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.50 E-value=4e-05 Score=81.49 Aligned_cols=107 Identities=18% Similarity=0.298 Sum_probs=50.7
Q ss_pred CCccEEEccCCccccc-CCcccc-cccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHh
Q 040301 20 QIYWVMDLSSNSFSGH-IPNTFG-NLRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIG 97 (524)
Q Consensus 20 ~~l~~Ldls~n~l~~~-~p~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 97 (524)
++|+.||+++...-.. =|..++ .+|.|+.|.+++-.+.... |-....++++|..||+|+++++.. ..+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~d-------F~~lc~sFpNL~sLDIS~TnI~nl--~GIS 192 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDD-------FSQLCASFPNLRSLDISGTNISNL--SGIS 192 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchh-------HHHHhhccCccceeecCCCCccCc--HHHh
Confidence 4566666666433211 122222 3566666666664443321 013344556666666666666633 3444
Q ss_pred cCcccccEEEeccCcccc-cCCccccCCCCCCeEEcccCc
Q 040301 98 NFSASFQNFYAFNCKLKG-NIPQEIGNLRGLTLLSLFNND 136 (524)
Q Consensus 98 ~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~ 136 (524)
.+. +|+.|.+.+-.+.. ..-..+.+|++|+.||+|...
T Consensus 193 ~Lk-nLq~L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~ 231 (699)
T KOG3665|consen 193 RLK-NLQVLSMRNLEFESYQDLIDLFNLKKLRVLDISRDK 231 (699)
T ss_pred ccc-cHHHHhccCCCCCchhhHHHHhcccCCCeeeccccc
Confidence 444 55555544443321 112234445555555555433
No 477
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.50 E-value=0.00045 Score=67.30 Aligned_cols=86 Identities=24% Similarity=0.347 Sum_probs=73.0
Q ss_pred ccccCcccCCCCceEEEEEeCCCCEEEEEEeeccch---HHHHHHHHHHHHHhcCCCC-CccceeEEEEcCCcceEEEcc
Q 040301 436 FNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLE---RAFRSFDSECEVLRNVCHR-NLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 436 ~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~H~-niv~l~~~~~~~~~~~lv~e~ 511 (524)
|.....+|.|+|+.||++... ..+|+|.+..... .....|.+|+.+++.+.|+ +|+++++++......++++||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566778999999999999976 7789999975442 2467899999999999988 799999999777778999999
Q ss_pred cCCCCHHHHHHh
Q 040301 512 LLNISITIIRRH 523 (524)
Q Consensus 512 ~~~gsL~~~l~~ 523 (524)
+.++++.++++.
T Consensus 80 ~~~~~l~~~~~~ 91 (384)
T COG0515 80 VDGGSLEDLLKK 91 (384)
T ss_pred CCCCcHHHHHHh
Confidence 999999977653
No 478
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=97.49 E-value=0.00029 Score=62.95 Aligned_cols=73 Identities=19% Similarity=0.190 Sum_probs=49.5
Q ss_pred cCcccCCCCceEEEEEeCCCCEEEEEEeeccch--HHHHH----------------------HHHHHHHHhcCCCCC--c
Q 040301 439 CNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLE--RAFRS----------------------FDSECEVLRNVCHRN--L 492 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~--~~~~~----------------------~~~Ei~~l~~l~H~n--i 492 (524)
.+.||+|+||+||+|...+++.||||.+..... ..... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999987889999999865321 11111 135666666664443 4
Q ss_pred cceeEEEEcCCcceEEEcccCCC
Q 040301 493 IKILSSCSNPDFKALMWGRLLNI 515 (524)
Q Consensus 493 v~l~~~~~~~~~~~lv~e~~~~g 515 (524)
.+.+++ ...++||||+++|
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~ 100 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGD 100 (187)
T ss_pred CceEec----CCCEEEEEEeCCC
Confidence 444443 2468999999984
No 479
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.44 E-value=0.00022 Score=63.59 Aligned_cols=87 Identities=23% Similarity=0.320 Sum_probs=69.1
Q ss_pred hhccccccCcccCCCCceEEEEE-eCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCC-CCccceeEEEEcCCcceEEE
Q 040301 432 ATDEFNECNLLGTGSFGSVYKGT-ISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCH-RNLIKILSSCSNPDFKALMW 509 (524)
Q Consensus 432 ~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H-~niv~l~~~~~~~~~~~lv~ 509 (524)
....|..+++||+|+||.+|.|. ..+|..||+|.=..... ..+...|.++.+.++| ..|..+..|..+..+-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 34679999999999999999999 47899999997644332 1345678888888865 57778888888889999999
Q ss_pred cccCCCCHHHHH
Q 040301 510 GRLLNISITIIR 521 (524)
Q Consensus 510 e~~~~gsL~~~l 521 (524)
|.. |-||+++.
T Consensus 91 dLL-GPsLEdLf 101 (341)
T KOG1163|consen 91 DLL-GPSLEDLF 101 (341)
T ss_pred ecc-CccHHHHH
Confidence 977 55888865
No 480
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.44 E-value=0.00048 Score=57.26 Aligned_cols=84 Identities=14% Similarity=0.175 Sum_probs=31.1
Q ss_pred cccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCC
Q 040301 120 EIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYNNLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPCLASLTSL 199 (524)
Q Consensus 120 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 199 (524)
.|.+..+|+.+.+.. .+..+....|..+++|+.+.+..+ +...-...|..+++++.+.+.. .+.......|..+++|
T Consensus 7 ~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 7 AFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 344445555555542 344344445555555555555443 3323333444444455555533 2222223334444455
Q ss_pred CEEEccC
Q 040301 200 RELHLGS 206 (524)
Q Consensus 200 ~~L~l~~ 206 (524)
+.+++..
T Consensus 84 ~~i~~~~ 90 (129)
T PF13306_consen 84 KNIDIPS 90 (129)
T ss_dssp CEEEETT
T ss_pred cccccCc
Confidence 5555433
No 481
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=97.36 E-value=0.00042 Score=67.78 Aligned_cols=87 Identities=23% Similarity=0.317 Sum_probs=68.1
Q ss_pred cccccCcccCCCCceEEEEEeCCC--CEEEEEEeeccchHHHHHHHHHHHHHhcCCC----CCccceeEEE-EcCCcceE
Q 040301 435 EFNECNLLGTGSFGSVYKGTISDW--TNVAIKIFNLQLERAFRSFDSECEVLRNVCH----RNLIKILSSC-SNPDFKAL 507 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~~~~--~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H----~niv~l~~~~-~~~~~~~l 507 (524)
.|.+.+.||+|+||.||.+..... ..+|+|.-..........+..|+.++..+.+ +++.++++.. ..+.+.||
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999996432 4688887765432222267889999988873 6888999888 47788999
Q ss_pred EEcccCCCCHHHHHH
Q 040301 508 MWGRLLNISITIIRR 522 (524)
Q Consensus 508 v~e~~~~gsL~~~l~ 522 (524)
||+.+ |-+|.++.+
T Consensus 99 VM~l~-G~sL~dl~~ 112 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRK 112 (322)
T ss_pred EEecc-CccHHHHHH
Confidence 99965 679998764
No 482
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.31 E-value=0.00011 Score=78.27 Aligned_cols=32 Identities=19% Similarity=0.111 Sum_probs=15.3
Q ss_pred CccEEEccCCcccccCCcccccccCCCEEEccc
Q 040301 21 IYWVMDLSSNSFSGHIPNTFGNLRHLSSLLLTW 53 (524)
Q Consensus 21 ~l~~Ldls~n~l~~~~p~~~~~l~~L~~L~l~~ 53 (524)
+++..++.+.......-....... |++|.|.+
T Consensus 61 ~ltki~l~~~~~~~~~~~~l~~~~-L~sl~LGn 92 (699)
T KOG3665|consen 61 NLTKIDLKNVTLQHQTLEMLRKQD-LESLKLGN 92 (699)
T ss_pred eeEEeeccceecchhHHHHHhhcc-ccccCCcc
Confidence 555555555555433322223333 66666654
No 483
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=97.27 E-value=0.00021 Score=70.52 Aligned_cols=88 Identities=16% Similarity=0.260 Sum_probs=70.4
Q ss_pred cccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCC------CCCccceeEEEEcCCcceE
Q 040301 435 EFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVC------HRNLIKILSSCSNPDFKAL 507 (524)
Q Consensus 435 ~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~------H~niv~l~~~~~~~~~~~l 507 (524)
.|.+....|+|-|+.|.+|.. ..|+.||||+|...-. ..+.=++|+++|++++ --++++++..|.....+||
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl 511 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL 511 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence 577777889999999999996 4678999999965321 2233457999999985 2378999999999999999
Q ss_pred EEcccCCCCHHHHHHhC
Q 040301 508 MWGRLLNISITIIRRHL 524 (524)
Q Consensus 508 v~e~~~~gsL~~~l~~~ 524 (524)
|||-+. -+|.+.|+++
T Consensus 512 VFE~Ls-lNLRevLKKy 527 (752)
T KOG0670|consen 512 VFEPLS-LNLREVLKKY 527 (752)
T ss_pred Eehhhh-chHHHHHHHh
Confidence 999776 5999999864
No 484
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=97.25 E-value=0.0013 Score=61.15 Aligned_cols=82 Identities=9% Similarity=0.090 Sum_probs=60.4
Q ss_pred Cccc-CCCCceEEEEEeCCCCEEEEEEeeccc-------------hHHHHHHHHHHHHHhcCCCCCc--cceeEEEEcCC
Q 040301 440 NLLG-TGSFGSVYKGTISDWTNVAIKIFNLQL-------------ERAFRSFDSECEVLRNVCHRNL--IKILSSCSNPD 503 (524)
Q Consensus 440 ~~ig-~g~~g~v~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~Ei~~l~~l~H~ni--v~l~~~~~~~~ 503 (524)
..+| .|+.|+||.+... +..+++|.+.... ......+.+|++++.++.|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4677 8899999998874 6788999885421 0123567899999999998875 67777654432
Q ss_pred -c---ceEEEcccCC-CCHHHHHH
Q 040301 504 -F---KALMWGRLLN-ISITIIRR 522 (524)
Q Consensus 504 -~---~~lv~e~~~~-gsL~~~l~ 522 (524)
. .++||||++| ++|.++++
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~ 139 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQ 139 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHh
Confidence 2 2599999997 69988765
No 485
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.09 E-value=2.3e-05 Score=71.04 Aligned_cols=100 Identities=21% Similarity=0.210 Sum_probs=59.0
Q ss_pred ccCCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhcCcccccEEEeccCcccccC-Cccc
Q 040301 43 LRHLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGNFSASFQNFYAFNCKLKGNI-PQEI 121 (524)
Q Consensus 43 l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~ 121 (524)
+.+.+.|++.++.|+++ ....+++.|++|.|+-|.|+..-| +.... +|++|+|..|.|.+.. -.-+
T Consensus 18 l~~vkKLNcwg~~L~DI----------sic~kMp~lEVLsLSvNkIssL~p--l~rCt-rLkElYLRkN~I~sldEL~YL 84 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI----------SICEKMPLLEVLSLSVNKISSLAP--LQRCT-RLKELYLRKNCIESLDELEYL 84 (388)
T ss_pred HHHhhhhcccCCCccHH----------HHHHhcccceeEEeeccccccchh--HHHHH-HHHHHHHHhcccccHHHHHHH
Confidence 44566677777777665 445566677777777777764433 33443 6666666666664311 1224
Q ss_pred cCCCCCCeEEcccCcCcccCCc-----cccCCCCCCeEe
Q 040301 122 GNLRGLTLLSLFNNDLNGTISP-----TMGRLKQLRGLS 155 (524)
Q Consensus 122 ~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~ 155 (524)
.++++|+.|.|..|.-.+..+. .+.-+|+|++||
T Consensus 85 knlpsLr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 85 KNLPSLRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hcCchhhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 5677777777777766544332 234466666664
No 486
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.09 E-value=0.00031 Score=63.59 Aligned_cols=90 Identities=24% Similarity=0.303 Sum_probs=49.0
Q ss_pred CCccccCCCCCCeEEcccCcCcccCCccccCCCCCCeEecccC--cccccCCccccCCCCCCEEEccCCcccccCCcc--
Q 040301 117 IPQEIGNLRGLTLLSLFNNDLNGTISPTMGRLKQLRGLSLKYN--NLEGSIPYDLCHLKLMYGIRLTGNKLSGHIPPC-- 192 (524)
Q Consensus 117 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n--~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-- 192 (524)
+......+..|+.|++.+..++.. ..|-.+++|++|.++.| ++.+.++-....+|+|++|++++|+++. .++
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~ 110 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLR 110 (260)
T ss_pred cccccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccc
Confidence 344444556666666666666522 23445667777777777 4544444444445666666666666652 111
Q ss_pred -ccCCCCCCEEEccCCcCC
Q 040301 193 -LASLTSLRELHLGSNKLT 210 (524)
Q Consensus 193 -~~~l~~L~~L~l~~n~l~ 210 (524)
+..+.+|..|++.+|..+
T Consensus 111 pl~~l~nL~~Ldl~n~~~~ 129 (260)
T KOG2739|consen 111 PLKELENLKSLDLFNCSVT 129 (260)
T ss_pred hhhhhcchhhhhcccCCcc
Confidence 233445555566555544
No 487
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.01 E-value=2.7e-05 Score=70.61 Aligned_cols=99 Identities=23% Similarity=0.245 Sum_probs=68.5
Q ss_pred CCCCCEEEccCCcCCCccChhccCCCCCCEEEcCCCcCcccCCcCccCCCCCCEEEcCCCcCcccc--ccccccCCCCEE
Q 040301 196 LTSLRELHLGSNKLTSSIPSSLWSLEYILMINLSSNSLNDSLPSNIQTLKVLRVLDLSRNQLSGDI--STIGALVDLETL 273 (524)
Q Consensus 196 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~l~~L~~L 273 (524)
+.+.+.|++-++.+..+ .....++.|+.|.|+-|+|+.. ..+..+.+|++|+|..|.|.++. ..+.++|+|+.|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 34566667777766532 4456677788888888877643 33667788888888888887665 567788888888
Q ss_pred EccCCcccCCCccc-----ccCCCCCCEEe
Q 040301 274 SLASNQFQGPIPES-----VGSLISLESLD 298 (524)
Q Consensus 274 ~L~~N~l~~~~~~~-----~~~l~~L~~L~ 298 (524)
.|..|+..+..+.. +.-+|+|+.||
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhcc
Confidence 88888877665433 34567777665
No 488
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.89 E-value=0.00046 Score=74.88 Aligned_cols=92 Identities=20% Similarity=0.183 Sum_probs=65.9
Q ss_pred hhhhhhccccccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCC---CCCccceeEEEEcCCc
Q 040301 428 DIQRATDEFNECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVC---HRNLIKILSSCSNPDF 504 (524)
Q Consensus 428 ~l~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---H~niv~l~~~~~~~~~ 504 (524)
+.+..-..|.+...+|+|+||.||.|...+|+.||+|.-++... -+|.-=-+++.|++ -+.|+.+..++.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 34445567888999999999999999987799999998765432 11111123344444 2345555666666788
Q ss_pred ceEEEcccCCCCHHHHHH
Q 040301 505 KALMWGRLLNISITIIRR 522 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~ 522 (524)
-++|+||.+.|+|.+++.
T Consensus 769 S~lv~ey~~~Gtlld~~N 786 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN 786 (974)
T ss_pred ceeeeeccccccHHHhhc
Confidence 899999999999999874
No 489
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.87 E-value=0.0014 Score=60.17 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=61.5
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeeccch-HHHHHHHHHHHHHhcCCC--CCccceeEEEEcCC---cceEEEcccC
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQLE-RAFRSFDSECEVLRNVCH--RNLIKILSSCSNPD---FKALMWGRLL 513 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~H--~niv~l~~~~~~~~---~~~lv~e~~~ 513 (524)
+.++.|..+.+|++...+|..+++|....... ....++.+|++++..+.+ .++.+++++..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46889999999999986667899998754321 134567899999999875 44677777776542 5689999999
Q ss_pred CCCHHHH
Q 040301 514 NISITII 520 (524)
Q Consensus 514 ~gsL~~~ 520 (524)
|+++.+.
T Consensus 84 G~~l~~~ 90 (223)
T cd05154 84 GRVLRDR 90 (223)
T ss_pred CEecCCC
Confidence 9887654
No 490
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.72 E-value=0.003 Score=59.26 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=66.2
Q ss_pred ccccccCcccCCCCceEEEEE-eCCCCEEEEEEeeccchHHHHHHHHHHHHHhcC-CCCCccceeEEEEcCCcceEEEcc
Q 040301 434 DEFNECNLLGTGSFGSVYKGT-ISDWTNVAIKIFNLQLERAFRSFDSECEVLRNV-CHRNLIKILSSCSNPDFKALMWGR 511 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~ 511 (524)
-.|.+.++||+|+||+.+.|+ +-+++.||||-=+... ...+...|.+..+.+ .-+.|...|.+-..+.+-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 468999999999999999999 5578999999654332 234455677777766 468888888777778888999997
Q ss_pred cCCCCHHHHH
Q 040301 512 LLNISITIIR 521 (524)
Q Consensus 512 ~~~gsL~~~l 521 (524)
+ |-||+|+.
T Consensus 106 L-GPSLEDLF 114 (449)
T KOG1165|consen 106 L-GPSLEDLF 114 (449)
T ss_pred h-CcCHHHHH
Confidence 7 56888865
No 491
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=96.46 E-value=0.0045 Score=54.10 Aligned_cols=76 Identities=13% Similarity=0.089 Sum_probs=54.3
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCcc-ceeEEEEcCCcceEEEcccCCCCHH
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLI-KILSSCSNPDFKALMWGRLLNISIT 518 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv-~l~~~~~~~~~~~lv~e~~~~gsL~ 518 (524)
+.++.|.++.||+++.. +..+++|....... ....+.+|++++..+.+.+++ +++++. .+..++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 46788999999999874 67899998754431 123467899999888665554 444433 33468999999998876
Q ss_pred H
Q 040301 519 I 519 (524)
Q Consensus 519 ~ 519 (524)
+
T Consensus 80 ~ 80 (170)
T cd05151 80 T 80 (170)
T ss_pred c
Confidence 3
No 492
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=96.28 E-value=0.0017 Score=35.15 Aligned_cols=21 Identities=38% Similarity=0.621 Sum_probs=15.0
Q ss_pred CccEEEccCCcccccCCccccc
Q 040301 21 IYWVMDLSSNSFSGHIPNTFGN 42 (524)
Q Consensus 21 ~l~~Ldls~n~l~~~~p~~~~~ 42 (524)
+|+.|||++|+|+ .+|..|++
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~ 21 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSN 21 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT
T ss_pred CccEEECCCCcCE-eCChhhcC
Confidence 5777888888887 66666654
No 493
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=96.12 E-value=0.0025 Score=59.46 Aligned_cols=87 Identities=16% Similarity=0.154 Sum_probs=65.0
Q ss_pred ccccccCcccCCCCceEEEEEe-CCCCEEEEEEeeccc--hHHHHHHHHHHHHHhcCCCCCccceeEEEEcC------Cc
Q 040301 434 DEFNECNLLGTGSFGSVYKGTI-SDWTNVAIKIFNLQL--ERAFRSFDSECEVLRNVCHRNLIKILSSCSNP------DF 504 (524)
Q Consensus 434 ~~~~~~~~ig~g~~g~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~------~~ 504 (524)
..|.....+|.|.= .|..+.. -.++.||+|++.... ....+...+|..++..+.|+||++++.++... .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 34666677777766 4554543 357889999885432 33466778999999999999999999999764 35
Q ss_pred ceEEEcccCCCCHHHHHH
Q 040301 505 KALMWGRLLNISITIIRR 522 (524)
Q Consensus 505 ~~lv~e~~~~gsL~~~l~ 522 (524)
+|+|||||. ++|.+.+.
T Consensus 96 ~y~v~e~m~-~nl~~vi~ 112 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVIL 112 (369)
T ss_pred HHHHHHhhh-hHHHHHHH
Confidence 799999997 58887763
No 494
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=95.51 E-value=0.023 Score=58.47 Aligned_cols=81 Identities=12% Similarity=0.131 Sum_probs=55.2
Q ss_pred CcccCCCCceEEEEEeCCCCEEEEEEeeccchHHH------------------------------H----------HHHH
Q 040301 440 NLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAF------------------------------R----------SFDS 479 (524)
Q Consensus 440 ~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~------------------------------~----------~~~~ 479 (524)
..++.++.|+||+|++++|+.||||+..+.-.... + ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 68899999999999999999999999976431110 0 1455
Q ss_pred HHHHHhcC----CCCCccceeEEEEc-CCcceEEEcccCCCCHHHH
Q 040301 480 ECEVLRNV----CHRNLIKILSSCSN-PDFKALMWGRLLNISITII 520 (524)
Q Consensus 480 Ei~~l~~l----~H~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~ 520 (524)
|...+.++ .+..-++.-..|.+ .....|+|||++|-.+.+.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~ 256 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDI 256 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccH
Confidence 55555443 23333334444443 4567899999999877765
No 495
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.28 E-value=9.3e-05 Score=75.30 Aligned_cols=89 Identities=25% Similarity=0.235 Sum_probs=47.7
Q ss_pred CCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCCCCCChhHhc----CcccccEEEeccCccccc----C
Q 040301 46 LSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLGGILPPVIGN----FSASFQNFYAFNCKLKGN----I 117 (524)
Q Consensus 46 L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~----~~~~L~~L~l~~n~l~~~----~ 117 (524)
+..|.|.+|.+..-. .-.+...+.....|+.|++++|++....-..+.+ ....++.|++..|.+++. +
T Consensus 89 l~~L~L~~~~l~~~~----~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l 164 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRG----AEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPL 164 (478)
T ss_pred HHHhhhhhCccccch----HHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHH
Confidence 666777777776532 1111144556677777777777777432222221 111455566666655442 3
Q ss_pred CccccCCCCCCeEEcccCcCc
Q 040301 118 PQEIGNLRGLTLLSLFNNDLN 138 (524)
Q Consensus 118 ~~~~~~l~~L~~L~l~~n~l~ 138 (524)
.+.+.....++.++++.|.+.
T Consensus 165 ~~~L~~~~~l~~l~l~~n~l~ 185 (478)
T KOG4308|consen 165 AAVLEKNEHLTELDLSLNGLI 185 (478)
T ss_pred HHHHhcccchhHHHHHhcccc
Confidence 344445566666666666663
No 496
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.17 E-value=0.0014 Score=67.95 Aligned_cols=174 Identities=18% Similarity=0.108 Sum_probs=86.0
Q ss_pred ccCCCEEEccccc-cCCCCCCccccCccccCCCCCCCCEEEccCC-CCCCCC---ChhHhcCcccccEEEeccCc-cccc
Q 040301 43 LRHLSSLLLTWNN-LTTESSLADQWSFLSALTNCRHLKALSLGSN-PLGGIL---PPVIGNFSASFQNFYAFNCK-LKGN 116 (524)
Q Consensus 43 l~~L~~L~l~~n~-l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n-~l~~~~---~~~~~~~~~~L~~L~l~~n~-l~~~ 116 (524)
.+.|+.|.+..+. ++... ........++|+.|+++++ ...... ...+.....+|+.|+++.+. ++..
T Consensus 187 ~~~L~~l~l~~~~~~~~~~-------~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~ 259 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDS-------LDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDI 259 (482)
T ss_pred CchhhHhhhcccccCChhh-------HHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCch
Confidence 5677777777663 32210 0034456677777777763 111111 11233322477777777776 4433
Q ss_pred CCccccC-CCCCCeEEcccCc-CcccC-CccccCCCCCCeEecccCcccc--cCCccccCCCCCCEEEccCCcccccCCc
Q 040301 117 IPQEIGN-LRGLTLLSLFNND-LNGTI-SPTMGRLKQLRGLSLKYNNLEG--SIPYDLCHLKLMYGIRLTGNKLSGHIPP 191 (524)
Q Consensus 117 ~~~~~~~-l~~L~~L~l~~n~-l~~~~-~~~~~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 191 (524)
.-..++. +++|+.|.+.++. ++..- ......++.|++|+++++.... .+......+++++.|.+....-
T Consensus 260 ~l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~~------ 333 (482)
T KOG1947|consen 260 GLSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLNG------ 333 (482)
T ss_pred hHHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcCC------
Confidence 3333332 6778888876666 44221 1223456778888888776531 1222234455555544332211
Q ss_pred cccCCCCCCEEEccCCcC---CCccChhccCCCCCCEEEcCCCcC
Q 040301 192 CLASLTSLRELHLGSNKL---TSSIPSSLWSLEYILMINLSSNSL 233 (524)
Q Consensus 192 ~~~~l~~L~~L~l~~n~l---~~~~~~~~~~l~~L~~L~L~~n~l 233 (524)
+..++.+.+..... .....-....+++++.+.+..+..
T Consensus 334 ----c~~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~ 374 (482)
T KOG1947|consen 334 ----CPSLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGI 374 (482)
T ss_pred ----CccHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhc
Confidence 23333333332221 112223455667777777766663
No 497
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=95.12 E-value=0.067 Score=46.17 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=56.3
Q ss_pred cccCcccCCCCceEEEEEeCCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEcCCcceEEEcccCCCC
Q 040301 437 NECNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSNPDFKALMWGRLLNIS 516 (524)
Q Consensus 437 ~~~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 516 (524)
.....+++|.+|.||.|.+. +..+|+|.-...+ ....+..|.+++..+...++.+=+..+ +..++.|||.+|-.
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y---g~~~i~me~i~G~~ 98 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY---GEDFIRMEYIDGRP 98 (201)
T ss_pred hhhhhhhcccccEEEEeecc-CceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe---chhhhhhhhhcCcc
Confidence 44568999999999999984 4588888765433 356788999999988877766433222 23345599999877
Q ss_pred HHHH
Q 040301 517 ITII 520 (524)
Q Consensus 517 L~~~ 520 (524)
|.++
T Consensus 99 L~~~ 102 (201)
T COG2112 99 LGKL 102 (201)
T ss_pred hhhh
Confidence 7654
No 498
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=95.06 E-value=0.0011 Score=63.98 Aligned_cols=276 Identities=18% Similarity=0.098 Sum_probs=130.4
Q ss_pred CCCEEEccccccCCCCCCccccCccccCCCCCCCCEEEccCCCCC-CCCChhHhcCcccccEEEeccC-cccccCCc-cc
Q 040301 45 HLSSLLLTWNNLTTESSLADQWSFLSALTNCRHLKALSLGSNPLG-GILPPVIGNFSASFQNFYAFNC-KLKGNIPQ-EI 121 (524)
Q Consensus 45 ~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~-~~ 121 (524)
.|++|.+++++-.....+ -....+.+++++|++.++... ...-..+.+...+|+.|++-.| .++...-. --
T Consensus 139 ~lk~LSlrG~r~v~~ssl------rt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la 212 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSL------RTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLA 212 (483)
T ss_pred ccccccccccccCCcchh------hHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHH
Confidence 478888877755443321 133356778888888777632 2223345555557777777774 33332222 22
Q ss_pred cCCCCCCeEEcccCcCccc--CCccccCCCCCCeEecccCccccc--CCccccCCCCCCEEEccCCc-ccccC-CccccC
Q 040301 122 GNLRGLTLLSLFNNDLNGT--ISPTMGRLKQLRGLSLKYNNLEGS--IPYDLCHLKLMYGIRLTGNK-LSGHI-PPCLAS 195 (524)
Q Consensus 122 ~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~l~~n~-l~~~~-~~~~~~ 195 (524)
...++|++|+++.+.-... +.....++..++.+.+.+|.-.+. +-..-.....+..+++..+. +++.. ...-..
T Consensus 213 ~gC~kL~~lNlSwc~qi~~~gv~~~~rG~~~l~~~~~kGC~e~~le~l~~~~~~~~~i~~lnl~~c~~lTD~~~~~i~~~ 292 (483)
T KOG4341|consen 213 EGCRKLKYLNLSWCPQISGNGVQALQRGCKELEKLSLKGCLELELEALLKAAAYCLEILKLNLQHCNQLTDEDLWLIACG 292 (483)
T ss_pred HhhhhHHHhhhccCchhhcCcchHHhccchhhhhhhhcccccccHHHHHHHhccChHhhccchhhhccccchHHHHHhhh
Confidence 4567777777777643211 111234455555555554321110 00011222334444443332 22110 000122
Q ss_pred CCCCCEEEccCCcC-CCccC-hhccCCCCCCEEEcCCCc-CcccCCcCc-cCCCCCCEEEcCCCcCcccc---ccccccC
Q 040301 196 LTSLRELHLGSNKL-TSSIP-SSLWSLEYILMINLSSNS-LNDSLPSNI-QTLKVLRVLDLSRNQLSGDI---STIGALV 268 (524)
Q Consensus 196 l~~L~~L~l~~n~l-~~~~~-~~~~~l~~L~~L~L~~n~-l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~---~~~~~l~ 268 (524)
+..|+.|+.+++.- +...- .--.+.++|+.+-+.+++ +++.--..+ .+.+.|+.+++......... ..-..++
T Consensus 293 c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~ 372 (483)
T KOG4341|consen 293 CHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCP 372 (483)
T ss_pred hhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCc
Confidence 45566666665432 21111 122345667777776664 222111111 24566666666655432111 2223556
Q ss_pred CCCEEEccCCcccCCC-----cccccCCCCCCEEeCCCCcCC-CCCcccccCCCCCCeEEccCC
Q 040301 269 DLETLSLASNQFQGPI-----PESVGSLISLESLDLSGNNLS-GKIPKSLETLSHLKQFNASHN 326 (524)
Q Consensus 269 ~L~~L~L~~N~l~~~~-----~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~l~l~~n 326 (524)
.|+.|.|+.+...... ...-..+..|+.+.+++++.. ...-+.+..+++|+.+++-+.
T Consensus 373 ~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~ 436 (483)
T KOG4341|consen 373 RLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDC 436 (483)
T ss_pred hhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeech
Confidence 6777777766432111 111133456677777777643 222344555666666665443
No 499
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=94.79 E-value=0.036 Score=55.52 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=55.6
Q ss_pred CCceEEEEEe-CCCCEEEEEEeeccchHHHHHHHHHHHHHhcCCCCCccceeEEEEc----CCcceEEEcccCC-CCHHH
Q 040301 446 SFGSVYKGTI-SDWTNVAIKIFNLQLERAFRSFDSECEVLRNVCHRNLIKILSSCSN----PDFKALMWGRLLN-ISITI 519 (524)
Q Consensus 446 ~~g~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~~ 519 (524)
.-.+.|+++. .+|..|+.|++.....+.......-++..+++.|+|+|++.+++.+ +..+++||+|.++ ++|.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3446899995 5899999999954333223333455788999999999999998874 3468999999997 56655
Q ss_pred H
Q 040301 520 I 520 (524)
Q Consensus 520 ~ 520 (524)
+
T Consensus 368 ~ 368 (655)
T KOG3741|consen 368 L 368 (655)
T ss_pred H
Confidence 4
No 500
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.62 E-value=0.045 Score=56.25 Aligned_cols=79 Identities=16% Similarity=0.178 Sum_probs=53.3
Q ss_pred cCcccCCCCceEEEEEeCCCCEEEEEEeeccchHH-------------------------------HH------HHHHHH
Q 040301 439 CNLLGTGSFGSVYKGTISDWTNVAIKIFNLQLERA-------------------------------FR------SFDSEC 481 (524)
Q Consensus 439 ~~~ig~g~~g~v~~~~~~~~~~vavK~~~~~~~~~-------------------------------~~------~~~~Ei 481 (524)
.+.||.-+.|+||+|++++|+.||||+.++.-+.. .+ +|.+|.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 36889999999999999999999999987643111 00 256666
Q ss_pred HHHhc----CCCCC------ccceeEEEEcCCcceEEEcccCCCCHHH
Q 040301 482 EVLRN----VCHRN------LIKILSSCSNPDFKALMWGRLLNISITI 519 (524)
Q Consensus 482 ~~l~~----l~H~n------iv~l~~~~~~~~~~~lv~e~~~~gsL~~ 519 (524)
+...+ +.|-+ |.+++..+ .....|+||||+|.-+.|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~D 291 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKIND 291 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCC
Confidence 54333 34555 33333332 346789999999987654
Done!