Your job contains 1 sequence.
>040303
MYGMGLGLFQGINRMEEARARVYTLVYKLKASCMLLEHGSKNEHWFSMHDVVRDVAIAIA
TREQNVLTMRYELVNSREWLDEGALKFYTSIVLHDSKMNVLLPEVLECPQLQLLSLWTEK
SSLITLPDNFFRKLTQVRVLDLTYMHLSLLPSSLGLLTNLRTLCLYCSELQDIAVIGELK
NLEILCLRGSYIEQLPVEIGQLTRLRSLDLRDCDRLQVIPPNVLSNLSHLEELYIRSFNK
WEVEVEAAGVKNASLEELKRLPNLTTLELCIPDVNTLPKGLFFEKLERYRICIGRWCWED
TSPTCSRTFRLLLGTDNCISFKSGHIVQLQRIEDLCLSGLPDQDIIELVNNKLGSYSSQL
KHLWVEGCQAPSPKESKRCKESTSEMRSNEIILEDHVNVPNTFFLKGGLPNLETLELYNV
NVERIWKSQLPAMSCGIQTLTRLIVYGCGELRCLFSSSIVNSFIRLQHLEIDECPILEEI
IVIDQQERKNVVFPQLQFLKMVDLEKLTSFCTGDVHIEFPTLETLEVIRCPEFLLTAHDL
TKEVRTRFKIYS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040303
(552 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2136447 - symbol:AT4G27190 species:3702 "Arabi... 170 1.4e-15 2
TAIR|locus:2131689 - symbol:AT4G27220 species:3702 "Arabi... 199 2.9e-12 1
TAIR|locus:2005517 - symbol:RPS2 "RESISTANT TO P. SYRINGA... 127 4.5e-10 2
TAIR|locus:2132741 - symbol:AT4G10780 species:3702 "Arabi... 110 3.1e-07 2
TAIR|locus:2034770 - symbol:SUMM2 "AT1G12280" species:370... 109 3.0e-06 3
UNIPROTKB|E1BU15 - symbol:SHOC2 "Leucine-rich repeat prot... 125 0.00018 1
UNIPROTKB|Q5F4C4 - symbol:SHOC2 "Leucine-rich repeat prot... 119 0.00071 1
TAIR|locus:2117149 - symbol:AT4G19050 species:3702 "Arabi... 94 0.00073 3
TAIR|locus:2171589 - symbol:AT5G47260 species:3702 "Arabi... 83 0.00079 3
UNIPROTKB|F1NRN7 - symbol:SHOC2 "Leucine-rich repeat prot... 118 0.00092 1
>TAIR|locus:2136447 [details] [associations]
symbol:AT4G27190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 PROSITE:PS51450
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 EMBL:AL035680 EMBL:AL161566 GO:GO:0043531
GO:GO:0017111 eggNOG:KOG4658 EMBL:DQ446871 IPI:IPI00536711
PIR:T06049 RefSeq:NP_194449.1 UniGene:At.65425
ProteinModelPortal:Q9T048 SMR:Q9T048 PRIDE:Q9T048
EnsemblPlants:AT4G27190.1 GeneID:828827 KEGG:ath:AT4G27190
TAIR:At4g27190 HOGENOM:HOG000091014 InParanoid:Q9T048 OMA:WIMSSSQ
PhylomeDB:Q9T048 ProtClustDB:CLSN2686073 Genevestigator:Q9T048
Uniprot:Q9T048
Length = 985
Score = 170 (64.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 79/304 (25%), Positives = 134/304 (44%)
Query: 2 YGMGLGLFQGINRMEEARARVYTLVYKLKASCMLLEHGSKNEHWFSMHDVVRDVAIAIAT 61
Y M G + + E++ T V LK C LLE G + + MHDVVRD AI I +
Sbjct: 418 YWMAEGFMEELGSQEDSMNEGITTVESLKDYC-LLEDGDRRDT-VKMHDVVRDFAIWIMS 475
Query: 62 REQNVLTMRYELVNSREWL-DEGALKFYTS---IVLHDSKMNVLLPEVLE--CPQLQLLS 115
Q+ + LV S L D K S + L ++K+ L P+++E C + +L
Sbjct: 476 SSQDD---SHSLVMSGTGLQDIRQDKLAPSLRRVSLMNNKLESL-PDLVEEFCVKTSVLL 531
Query: 116 LWTEKSSLITLPDNFFRKLTQVRVLDL--TYMHXXXXXXXXXXXXXXXXXXXYCSELQDI 173
L L +P F + +R+L+L T + C +L +
Sbjct: 532 L-QGNFLLKEVPIGFLQAFPTLRILNLSGTRIKSFPSCSLLRLFSLHSLFLRDCFKLVKL 590
Query: 174 AVIGELKNLEILCLRGSYIEQLPVEIGQLTXXXXXXXXXXXXXQVIPPNVLSNLSHLEEL 233
+ L LE+L L G++I + P + +L + IP V+S LS LE L
Sbjct: 591 PSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVSRLSSLETL 650
Query: 234 YIRSFN-KWEVEVEAAGVKNASLEELKRLPNLTTLELCIPDVNTL--PKGLFFEKLERYR 290
+ S + +W V+ E + A++EE+ L L L + + L + + ++L++++
Sbjct: 651 DMTSSHYRWSVQGETQKGQ-ATVEEIGCLQRLQVLSIRLHSSPFLLNKRNTWIKRLKKFQ 709
Query: 291 ICIG 294
+ +G
Sbjct: 710 LVVG 713
Score = 111 (44.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 38/123 (30%), Positives = 59/123 (47%)
Query: 409 LPNLETLELYNVNVERIWKSQLPAMSCGIQTLTRLIVYGCGELRCLFSSSIVNSFIRLQH 468
LPNLE L L V++E + Q + ++TL + + C +LR L + L+
Sbjct: 808 LPNLEELHLRRVDLETFSELQTH-LGLKLETLKIIEITMCRKLRTLLDKRNFLTIPNLEE 866
Query: 469 LEIDECPILEEIIVIDQQERKNVVFPQLQFLKMVDLEKLTSFCT-GDVHIEFPTLETLEV 527
+EI C L+ + + V P L+ LK+ +L L S C G+V + LE +EV
Sbjct: 867 IEISYCDSLQNLHEALLYHQPFV--PNLRVLKLRNLPNLVSICNWGEV---WECLEQVEV 921
Query: 528 IRC 530
I C
Sbjct: 922 IHC 924
Score = 47 (21.6 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 38/145 (26%), Positives = 61/145 (42%)
Query: 320 SFKSGHIVQL-QRIEDLCLSGLPDQDIIELVNNKLGSYSSQLKHLWVEGCQAPSPKESKR 378
S +S I+ L +E+L L + + EL + LG LK + + C+ KR
Sbjct: 798 SKQSSDILDLLPNLEELHLRRVDLETFSELQTH-LGLKLETLKIIEITMCRKLRTLLDKR 856
Query: 379 CKESTSEMRSNEIILEDHV-NVPNTF-FLKGGLPNLETLELYNV-NVERI--WKSQLPAM 433
+ + EI D + N+ + + +PNL L+L N+ N+ I W
Sbjct: 857 NFLTIPNLEEIEISYCDSLQNLHEALLYHQPFVPNLRVLKLRNLPNLVSICNWGE---VW 913
Query: 434 SCGIQTLTRLIVYGCGELRCLFSSS 458
C L ++ V C +L CL SS
Sbjct: 914 EC----LEQVEVIHCNQLNCLPISS 934
>TAIR|locus:2131689 [details] [associations]
symbol:AT4G27220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
EMBL:AL161566 eggNOG:COG4886 GO:GO:0043531 HOGENOM:HOG000091014
ProtClustDB:CLSN2686073 EMBL:AL030978 EMBL:DQ446872 IPI:IPI00548786
PIR:T05746 RefSeq:NP_194452.1 UniGene:At.65426
ProteinModelPortal:O81825 SMR:O81825 PRIDE:O81825
EnsemblPlants:AT4G27220.1 GeneID:828830 KEGG:ath:AT4G27220
TAIR:At4g27220 InParanoid:O81825 OMA:LAINIMA PhylomeDB:O81825
ArrayExpress:O81825 Genevestigator:O81825 Uniprot:O81825
Length = 919
Score = 199 (75.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 126/477 (26%), Positives = 204/477 (42%)
Query: 1 MYGMGLGLFQGINRMEEARARVYTLVYKLKASCMLLEHGSKNEHWFSMHDVVRDVAIAIA 60
MY + GL G + E+ TLV +LK SC LLE G + MHDVVRD AI
Sbjct: 386 MYWVAEGLLDGQHHYEDMMNEGVTLVERLKDSC-LLEDGDSCDT-VKMHDVVRDFAIWFM 443
Query: 61 TREQNVLTMRYELVNSREWLDEGAL-KFYTSIV---LHDSKMNVLLPEVLECPQLQLLSL 116
+ + + LV + L E KF +S+ L +K+ L V+E + +L L
Sbjct: 444 SSQGEGF---HSLVMAGRGLIEFPQDKFVSSVQRVSLMANKLERLPNNVIEGVETLVLLL 500
Query: 117 WTEKSSLITLPDNFFRKLTQVRVLDLTYMHXXXX-XXXXXXXXXXXXXXXYCSELQDIAV 175
S + +P+ F + +R+LDL+ + C +L+++
Sbjct: 501 -QGNSHVKEVPNGFLQAFPNLRILDLSGVRIRTLPDSFSNLHSLRSLVLRNCKKLRNLPS 559
Query: 176 IGELKNLEILCLRGSYIEQLPVEIGQLTXXXXXXXXXXXXXQVIPPNVLSNLSHLEELYI 235
+ L L+ L L S I +LP + L+ Q IP + LS LE L +
Sbjct: 560 LESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTILQLSSLEVLDM 619
Query: 236 R-SFNKWEVEVEAAGVKNASLEELKRLPNLTTLELCIPDVNTLPKGLFFEKLERYRICIG 294
S W ++ E + A+L+E+ LP+L L + + DV L F+ L + R+
Sbjct: 620 AGSAYSWGIKGEEREGQ-ATLDEVTCLPHLQFLAIKLLDV--LSFSYEFDSLTK-RLTKF 675
Query: 295 RWCWE---DTSPTCSRTFRLLLGTDNCISFKSGHIVQLQRIEDL--CLSGLPDQDIIELV 349
++ + SP + L + N + G ++Q DL C GL LV
Sbjct: 676 QFLFSPIRSVSPPGTGEGCLAISDVNVSNASIGWLLQHVTSLDLNYC-EGLNGM-FENLV 733
Query: 350 NNKLGSYSSQLKHLWVEGCQAPSPKESKRCKESTSEMRSN-EIILEDHVNVPNTFFLKGG 408
S+ + +K L + PS + C ES ++ N E + D+VN+ + L G
Sbjct: 734 TKSKSSFVA-MKALSIH--YFPSLSLASGC-ESQLDLFPNLEELSLDNVNLESIGELNGF 789
Query: 409 LP-NLETLELYNVN----VERIWKSQLPAMSCGIQTLTRLIVYGCGELRCLFSSSIV 460
L L+ L+L V+ ++R++ Q+ A + + L + V C L LF+ S V
Sbjct: 790 LGMRLQKLKLLQVSGCRQLKRLFSDQILAGT--LPNLQEIKVVSCLRLEELFNFSSV 844
Score = 132 (51.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 43/125 (34%), Positives = 63/125 (50%)
Query: 410 PNLETLELYNVNVERIWKSQLPAMSCGIQTLTRLIVYGCGELRCLFSSSIVNSFI-RLQH 468
PNLE L L NVN+E I + + +Q L L V GC +L+ LFS I+ + LQ
Sbjct: 768 PNLEELSLDNVNLESIGELN-GFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTLPNLQE 826
Query: 469 LEIDECPILEEII---VIDQQERKNVVFPQLQFLKMVDLEKLTSFCTGDVHIEFPTLETL 525
+++ C LEE+ + + P+L +K+ L +L S C V +E +LE L
Sbjct: 827 IKVVSCLRLEELFNFSSVPVDFCAESLLPKLTVIKLKYLPQLRSLCNDRVVLE--SLEHL 884
Query: 526 EVIRC 530
EV C
Sbjct: 885 EVESC 889
>TAIR|locus:2005517 [details] [associations]
symbol:RPS2 "RESISTANT TO P. SYRINGAE 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006952 "defense response" evidence=ISS;TAS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0009626 "plant-type
hypersensitive response" evidence=IMP] [GO:0016045 "detection of
bacterium" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0045087 "innate immune response" evidence=RCA] [GO:0050776
"regulation of immune response" evidence=RCA] [GO:0050832 "defense
response to fungus" evidence=RCA] [GO:0051707 "response to other
organism" evidence=RCA] InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0016045
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0042742
eggNOG:COG4886 GO:GO:0043531 EMBL:AL049483 GO:GO:0009626
GO:GO:0017111 UniGene:At.46720 UniGene:At.69675 EMBL:U14158
EMBL:U12860 EMBL:AF368301 EMBL:AF487797 EMBL:AF487798 EMBL:AF487799
EMBL:AF487800 EMBL:AF487801 EMBL:AF487802 EMBL:AF487803
EMBL:AF487804 EMBL:AF487805 EMBL:AF487806 EMBL:AF487807
EMBL:AF487808 EMBL:AF487809 EMBL:AF487810 EMBL:AF487811
EMBL:AF487812 EMBL:AF487813 EMBL:AF487814 EMBL:AF487815
EMBL:AF487816 EMBL:AF487817 EMBL:AF487818 EMBL:AF487819
EMBL:AF487820 EMBL:AF487821 EMBL:AF487822 EMBL:AF487823
EMBL:AK117214 EMBL:BT005972 EMBL:U97217 IPI:IPI00547830 PIR:A54809
RefSeq:NP_194339.1 UniGene:At.75226 PDB:2FT5 PDBsum:2FT5
ProteinModelPortal:Q42484 SMR:Q42484 DIP:DIP-53465N IntAct:Q42484
STRING:Q42484 EnsemblPlants:AT4G26090.1 GeneID:828715
KEGG:ath:AT4G26090 TAIR:At4g26090 InParanoid:Q42484 KO:K13459
OMA:AFNNDLE PhylomeDB:Q42484 ProtClustDB:CLSN2685902
Genevestigator:Q42484 GermOnline:AT4G26090 Uniprot:Q42484
Length = 909
Score = 127 (49.8 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 53/215 (24%), Positives = 100/215 (46%)
Query: 329 LQRIEDLCLSGLPDQDIIELVNN-KLGSYSSQLKHLWVEGCQA------PSPKESKRCKE 381
L+ +E+L G+ + L + G+ ++HL VE C PS R
Sbjct: 661 LEYLENLTTLGITVLSLETLKTLFEFGALHKHIQHLHVEECNELLYFNLPSLTNHGRNLR 720
Query: 382 STSEMRSNEIILEDHVNVPNTFFLKGGLPNLETLELYNV-NVERIWKSQLPAMSCGIQTL 440
S +++ +++ P F LP+LE L L+++ N+ R+W + + + C ++ +
Sbjct: 721 RLSIKSCHDL---EYLVTPADFE-NDWLPSLEVLTLHSLHNLTRVWGNSV-SQDC-LRNI 774
Query: 441 TRLIVYGCGELRCLFSSSIVNSFIRLQHLEIDECPILEEIIVIDQQERKNV----VFPQL 496
+ + C +L+ + S V +L+ +E+ +C +EE+I + E +V +FP L
Sbjct: 775 RCINISHCNKLK---NVSWVQKLPKLEVIELFDCREIEELI--SEHESPSVEDPTLFPSL 829
Query: 497 QFLKMVDLEKLTSFCTGDVHIEFPTLETLEVIRCP 531
+ L+ DL +L S F +ETL + CP
Sbjct: 830 KTLRTRDLPELNSILPS--RFSFQKVETLVITNCP 862
Score = 102 (41.0 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 65/285 (22%), Positives = 113/285 (39%)
Query: 16 EEARARVYTLV-YKLKASCMLLEHGSKNEH--WFSMHDVVRDVAIAIATREQNVLTMRYE 72
EE + LV Y + + HG + +F + D+ A + T ++ +
Sbjct: 416 EEHSIEIEQLVEYWVGEGFLTSSHGVNTIYKGYFLIGDL--KAACLLETGDEKTQVKMHN 473
Query: 73 LVNSRE-WL--DEGALKFYTSIVLHDSKM-NVLLPEVLECPQLQLLSLWTEKSSLITLPD 128
+V S W+ ++G Y ++L + M + P+ Q ++SL + + TLP+
Sbjct: 474 VVRSFALWMASEQGT---YKELILVEPSMGHTEAPKAENWRQALVISLLDNR--IQTLPE 528
Query: 129 NFF-RKLTQVRVLDLTYMHXXXXXXXXXXXXXXXXXXXYCSELQDIAVIGELKNLEILCL 187
KLT + + + + + S + I L L L +
Sbjct: 529 KLICPKLTTLMLQQNSSLKKIPTGFFMHMPVLRVLDLSFTSITEIPLSIKYLVELYHLSM 588
Query: 188 RGSYIEQLPVEIGQLTXXXXXXXXXXXXXQVIPPNVLSNLSHLEELYIR-SFNKWEVEVE 246
G+ I LP E+G L Q IP + + LS LE L + S+ WE++
Sbjct: 589 SGTKISVLPQELGNLRKLKHLDLQRTQFLQTIPRDAICWLSKLEVLNLYYSYAGWELQSF 648
Query: 247 AAG-VKNASLEELKRLPNLTTLELCIPDVNTLPKGLF-FEKLERY 289
+ +L+ L NLTTL + + + TL K LF F L ++
Sbjct: 649 GEDEAEELGFADLEYLENLTTLGITVLSLETL-KTLFEFGALHKH 692
>TAIR|locus:2132741 [details] [associations]
symbol:AT4G10780 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 InterPro:IPR003593
Pfam:PF00931 PRINTS:PR00364 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0043531
GO:GO:0017111 HOGENOM:HOG000238348 ProtClustDB:CLSN2682239
EMBL:AF080119 EMBL:AL161518 IPI:IPI00538199 PIR:T01899
RefSeq:NP_192816.1 UniGene:At.65351 ProteinModelPortal:O82484
SMR:O82484 PaxDb:O82484 PRIDE:O82484 EnsemblPlants:AT4G10780.1
GeneID:826674 KEGG:ath:AT4G10780 TAIR:At4g10780 eggNOG:NOG269668
InParanoid:O82484 OMA:WNCEISE PhylomeDB:O82484 ArrayExpress:O82484
Genevestigator:O82484 Uniprot:O82484
Length = 892
Score = 110 (43.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 45/148 (30%), Positives = 71/148 (47%)
Query: 7 GLFQGINRMEEARARVYTLVYKLKASCMLLEHGSKNEHWFSMHDVVRDVAIAIAT----- 61
G G E A + Y ++ L +C+L E G KN+ MHDVVR++A+ +
Sbjct: 434 GFIDGNIGKERAVNQGYEILGTLVRACLLSEEG-KNKLEVKMHDVVREMALWTLSDLGKN 492
Query: 62 REQNVLTMRYELVNSREWLDEGALKFYTSIVLHDSKMNVLLPEVL---ECPQLQLLSLWT 118
+E+ ++ L + D GA++ S MN + E+ ECP+L L L
Sbjct: 493 KERCIVQAGSGLRKVPKVEDWGAVRRL-------SLMNNGIEEISGSPECPELTTLFL-Q 544
Query: 119 EKSSLITLPDNFFRKLTQVRVLDLTYMH 146
E SL+ + FFR + ++ VLDL+ H
Sbjct: 545 ENKSLVHISGEFFRHMRKLVVLDLSENH 572
Score = 92 (37.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 416 ELYNVNVERI-WKSQLPAMSCGIQTLTRLIVYGCGELR----CLFSSSIVNSFI-RLQHL 469
E+ + +ER+ W + P C L+++I++ C L+ LF+ +I I +L+ L
Sbjct: 720 EISEIEIERLTWNTN-PTSPCFFN-LSQVIIHVCSSLKDLTWLLFAPNITYLMIEQLEQL 777
Query: 470 E--IDECPILEEIIVIDQQERKNVVFPQLQFLKMVDLEKLTSFCTGDVHIEFPTLETLEV 527
+ I QQ K + F +LQ L + L +L S + + FP L + V
Sbjct: 778 QELISHAKATGVTEEEQQQLHKIIPFQKLQILHLSSLPELKSIYW--ISLSFPCLSGIYV 835
Query: 528 IRCPE 532
RCP+
Sbjct: 836 ERCPK 840
>TAIR|locus:2034770 [details] [associations]
symbol:SUMM2 "AT1G12280" species:3702 "Arabidopsis
thaliana" [GO:0006952 "defense response" evidence=IGI;ISS]
[GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR000767
InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952 GO:GO:0043531
EMBL:AC025416 HOGENOM:HOG000238348 IPI:IPI00530385
RefSeq:NP_172692.1 UniGene:At.42083 ProteinModelPortal:P60838
SMR:P60838 PaxDb:P60838 PRIDE:P60838 EnsemblPlants:AT1G12280.1
GeneID:837782 KEGG:ath:AT1G12280 TAIR:At1g12280 eggNOG:NOG247334
InParanoid:P60838 OMA:AMASKRT PhylomeDB:P60838
ProtClustDB:CLSN2682239 Genevestigator:P60838 GermOnline:AT1G12280
Uniprot:P60838
Length = 894
Score = 109 (43.4 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 16 EEARARVYTLVYKLKASCMLLEHGSKNEHWFSMHDVVRDVAIAIATR--EQNVLTMRYEL 73
E A ++ Y ++ L +C+LLE E MHDVVR++A+ IA+ E +
Sbjct: 445 ERALSQGYEIIGILVRACLLLEEAINKEQ-VKMHDVVREMALWIASDLGEHKERCIVQVG 503
Query: 74 VNSREWLDEGALKFYTSI---VLHDSKMNVLLPEVLECPQLQLLSLWTEKS-SLITLPDN 129
V RE +K ++S+ L ++++ +L EC L+L +L+ +K+ SL+ + D
Sbjct: 504 VGLRE---VPKVKNWSSVRRMSLMENEIEILSGSP-EC--LELTTLFLQKNDSLLHISDE 557
Query: 130 FFRKLTQVRVLDLT 143
FFR + + VLDL+
Sbjct: 558 FFRCIPMLVVLDLS 571
Score = 67 (28.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 466 LQHLEIDECPILEEIIVIDQQERKNVVFP--QLQFLKMVDLEKLTSFCTGDVHIEFPTLE 523
L LE+ + ++E II ++ + + P +L+ L++ +L L S + FP L+
Sbjct: 770 LTSLEVLDSELVEGIINQEKAMTMSGIIPFQKLESLRLHNLAMLRSIYWQP--LSFPCLK 827
Query: 524 TLEVIRCPEFLLTAHDLTKEVRTR 547
T+ + +CPE L L E+ R
Sbjct: 828 TIHITKCPE--LRKLPLDSEIAIR 849
Score = 59 (25.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 32/128 (25%), Positives = 60/128 (46%)
Query: 176 IGELKNLEILCLRGSYIEQLPVEIGQLTXXXXXXXXXXXXXQVIPPNVLSNLSHLEELYI 235
I +L +L L L +YI++LPV + +L + I + +SN+S L +L +
Sbjct: 583 ISKLVSLRYLDLSWTYIKRLPVGLQELKKLRYLRLDYMKRLKSI--SGISNISSLRKLQL 640
Query: 236 RSFNKWEVEVEAAGVKNASLEELKRLPNLTTLELCIPDVNTLPKGLFFEKLER-YRICIG 294
+K +++ +EEL+ L +L L + I + K L +L + +I +
Sbjct: 641 LQ-SKMSLDMSL-------VEELQLLEHLEVLNISIKSSLVVEKLLNAPRLVKCLQILVL 692
Query: 295 RWCWEDTS 302
R E++S
Sbjct: 693 RGVQEESS 700
>UNIPROTKB|E1BU15 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019903 "protein phosphatase binding" evidence=IEA] [GO:0046579
"positive regulation of Ras protein signal transduction"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036
PROSITE:PS51450 GO:GO:0005634 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GO:GO:0046579 GO:GO:0000164
GeneTree:ENSGT00600000084236 OMA:LPHGIGN PANTHER:PTHR23155:SF38
EMBL:AADN02030891 IPI:IPI00571083 Ensembl:ENSGALT00000014267
Uniprot:E1BU15
Length = 582
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 104/445 (23%), Positives = 178/445 (40%)
Query: 60 ATREQNVLTMRYELVNSREWL--DEGALKFYTSIVLHDSKMNVLLPEVLE-CPQLQLLSL 116
A +E LT Y N + L + G L ++ L ++ + L P+ L+ +L++L L
Sbjct: 118 AVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL-PDSLDNLKKLRMLDL 176
Query: 117 WTEKSSLITLPDNFFRKLTQVRVLDLTYMHXXXXXXXXXXXXXXXXXXXYCSELQDI-AV 175
K L +P +R LT + L L + ++++ + A
Sbjct: 177 RHNK--LREIPSVVYR-LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAE 233
Query: 176 IGELKNLEILCLRGSYIEQLPVEIGQLTXXXXXXXXXXXXXQVIPPNVLSNLSHLEELYI 235
IGEL NL L + + +E LP EIG T + P + NLS L L +
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDL--PETIGNLSSLSRLGL 291
Query: 236 RSFNKWEVEVEAAGVKNASLEELKRLPNLTTLELCIPDVNTLPKGLFFEKLERYRICIGR 295
R +N+ + + K + L+EL L N +++TLP+GL ++ + + R
Sbjct: 292 R-YNRLSA-IPKSLAKCSELDELN-LEN--------NNISTLPEGLLSSLVKLTSLTLAR 340
Query: 296 WCWEDT---SPTCSRTFRLLLGTDNCIS------FKSGHIVQLQRIEDLCLSGLP-D--- 342
C++ P+ T L N I+ F ++ ++D L+ LP D
Sbjct: 341 NCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400
Query: 343 -QDIIEL--VNNKLGSYSSQLKHLWVEGCQAPSPKESKRCKESTSEMRS-NEIILEDHV- 397
++EL N+L + L S K+ +R E+ LE++
Sbjct: 401 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKL 460
Query: 398 -NVPNTF-FLKGGLPNLETLELYNVNVERIWKSQLPAMSCGIQTLTRLIVYGCGELRCLF 455
++PN +LK +L+ L L N +QL + GI LT L G GE
Sbjct: 461 ESLPNEIAYLK----DLQKLVLTN--------NQLTTLPRGIGHLTNLTHLGLGENLLTH 508
Query: 456 SSSIVNSFIRLQHLEIDECPILEEI 480
+ + L+ L +++ P L +
Sbjct: 509 LPEEIGTLENLEELYLNDNPNLHSL 533
>UNIPROTKB|Q5F4C4 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0046579 "positive regulation of
Ras protein signal transduction" evidence=ISS] [GO:0019903 "protein
phosphatase binding" evidence=ISS] [GO:0000164 "protein phosphatase
type 1 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR025875 Pfam:PF12799
GO:GO:0046579 GO:GO:0019903 GO:GO:0000164 HSSP:P07359
HOGENOM:HOG000116557 CTD:8036 PANTHER:PTHR23155:SF38 EMBL:AJ851376
IPI:IPI00600917 RefSeq:NP_001026407.1 UniGene:Gga.42449
ProteinModelPortal:Q5F4C4 GeneID:423894 KEGG:gga:423894
NextBio:20826295 Uniprot:Q5F4C4
Length = 529
Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
Identities = 100/415 (24%), Positives = 167/415 (40%)
Query: 60 ATREQNVLTMRYELVNSREWL--DEGALKFYTSIVLHDSKMNVLLPEVLE-CPQLQLLSL 116
A +E LT Y N + L + G L ++ L ++ + L P+ L+ +L++L L
Sbjct: 118 AVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL-PDSLDNLKKLRMLDL 176
Query: 117 WTEKSSLITLPDNFFRKLTQVRVLDLTYMHXXXXXXXXXXXXXXXXXXXYCSELQDI-AV 175
K L +P +R LT + L L + ++++ + A
Sbjct: 177 RHNK--LREIPSVVYR-LTSLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAE 233
Query: 176 IGELKNLEILCLRGSYIEQLPVEIGQLTXXXXXXXXXXXXXQVIPPNVLSNLSHLEELYI 235
IGEL NL L + + +E LP EIG T + P + NLS L L +
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDL--PETIGNLSSLSRLGL 291
Query: 236 RSFNKWEVEVEAAGVKNASLEELKRLPNLTTLELCIPDVNTLPKGLFFEKLERYRICIGR 295
R +N+ + + K + L+EL L N +++TLP+GL ++ + + R
Sbjct: 292 R-YNRLSA-IPKSLAKCSELDELN-LEN--------NNISTLPEGLLSSLVKLTSLTLAR 340
Query: 296 WCWEDT---SPTCSRTFRLLLGTDNCIS------FKSGHIVQLQRIEDLCLSGLP-D--- 342
C++ P+ T L N I+ F ++ ++D L+ LP D
Sbjct: 341 NCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400
Query: 343 -QDIIEL--VNNKLGSYSSQLKHLWVEGCQAPSPKESKRCKESTSEMRS-NEIILEDHV- 397
++EL N+L + L S K+ +R E+ LE++
Sbjct: 401 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKL 460
Query: 398 -NVPNTF-FLKGGLPNLETLELYNVNVERIWKSQLPAMSCGIQTLTRLIVYGCGE 450
++PN +LK +L+ L L N +QL + GI LT L G GE
Sbjct: 461 ESLPNEIAYLK----DLQKLVLTN--------NQLTTLPRGIGHLTNLTHLGLGE 503
>TAIR|locus:2117149 [details] [associations]
symbol:AT4G19050 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
EMBL:AL021711 eggNOG:COG4886 GO:GO:0043531 EMBL:AL161550
IPI:IPI00517473 PIR:T04426 RefSeq:NP_193640.4 UniGene:At.74500
ProteinModelPortal:P0CB16 SMR:P0CB16 PaxDb:P0CB16 PRIDE:P0CB16
EnsemblPlants:AT4G19050.1 GeneID:827643 KEGG:ath:AT4G19050
TAIR:At4g19050 HOGENOM:HOG000090532 KO:K06685 OMA:IFDVSGC
Genevestigator:P0CB16 GermOnline:AT4G19050 Uniprot:P0CB16
Length = 1201
Score = 94 (38.1 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 85 LKFYTSIVLHDSKMNVLLPEVLECPQLQLLSLWTEKSSLITLPDNFFRKLTQVRVLDLTY 144
LK +V+ D + + ++ L +L + + SSL+ +PD+FF+ +TQ++ L+L+
Sbjct: 467 LKKLRVLVIRDCDLIDNIDKLSGLQGLHVLEV-SGASSLVNIPDDFFKNMTQLQSLNLSG 525
Query: 145 MHXXXXXXXXXXXXXXX-XXXXYCSELQDIA-VIGELKNLEILCLRGS 190
+ +CSELQD+ I E + LE++ + G+
Sbjct: 526 LAIKSSPSTIEKLSMLRCFILRHCSELQDLPNFIVETRKLEVIDIHGA 573
Score = 62 (26.9 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 471 IDECPILEEIIVIDQQ-ERKNVVFPQLQFLKMVDLEKLTSFCTGDVHIEFPTLETLEVIR 529
++ C ++ + D+Q E++ P LQ L + +L LTS + F L+ L V
Sbjct: 1026 VERCKNMDVLFESDEQLEKEKSSSPSLQTLWISNLPLLTSLYSSKGGFIFKNLKKLSVDC 1085
Query: 530 CP 531
CP
Sbjct: 1086 CP 1087
Score = 60 (26.2 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 53/241 (21%), Positives = 91/241 (37%)
Query: 255 LEELKRLPNLTTLELC-IPDVNTLPKGLFFEKLERYRICIGRWCWEDTSPTCSRTFRL-L 312
L +L+ L NL L+ C D+ + + EK E + + + + + T + L
Sbjct: 647 LPQLRPLTNLQILDACGATDLVEMLEVCLEEKKELRILDMSKTSLPELADTIADVVNLNK 706
Query: 313 LGTDNCISFKS-GHIVQLQRIEDLCLSGLPDQDIIELVNNKLG--SYSSQLKHLWVEGCQ 369
L NC + I +L +E +SG ++ +N G SY ++ +
Sbjct: 707 LLLRNCSLIEELPSIEKLTHLEVFDVSGCIK---LKNINGSFGEMSYLHEVNLSETNLSE 763
Query: 370 APSP-KESKRCKESTSEMRSNEIILEDHVNVPNT-FFLKGGLPNLETLE--------LYN 419
P E KE S L + + N F G LET+E L+
Sbjct: 764 LPDKISELSNLKELIIRKCSKLKTLPNLEKLTNLEIFDVSGCTELETIEGSFENLSCLHK 823
Query: 420 VNVERIWKSQLPAMSCGIQTLTRLIVYGCGELRCLFSSSIVNSFIRLQHLEIDECPILEE 479
VN+ +LP + L LI+ C +L+ L + + L ++ C L++
Sbjct: 824 VNLSETNLGELPNKISELSNLKELILRNCSKLKALPN---LEKLTHLVIFDVSGCTNLDK 880
Query: 480 I 480
I
Sbjct: 881 I 881
>TAIR|locus:2171589 [details] [associations]
symbol:AT5G47260 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0045036
"protein targeting to chloroplast" evidence=RCA] InterPro:IPR000767
InterPro:IPR002182 InterPro:IPR003593 InterPro:IPR006703
Pfam:PF00931 Pfam:PF04548 PRINTS:PR00364 SMART:SM00382
GO:GO:0005525 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006952 GO:GO:0043531 GO:GO:0017111 EMBL:AB018117
HOGENOM:HOG000238348 eggNOG:KOG4658 IPI:IPI00527968
RefSeq:NP_199537.2 UniGene:At.55416 ProteinModelPortal:Q9LVT3
SMR:Q9LVT3 PaxDb:Q9LVT3 PRIDE:Q9LVT3 EnsemblPlants:AT5G47260.1
GeneID:834773 KEGG:ath:AT5G47260 TAIR:At5g47260 InParanoid:Q9LVT3
OMA:CNILEIT PhylomeDB:Q9LVT3 Genevestigator:Q9LVT3
GermOnline:AT5G47260 Uniprot:Q9LVT3
Length = 948
Score = 83 (34.3 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 40/151 (26%), Positives = 64/151 (42%)
Query: 397 VNVPNTFFLKGGLPNLET------LELYNVNVERI---WKSQLPA-MSCGIQTLTRLIVY 446
+++ T + GG+ +L L++ N+ I W+ + + Q + + ++
Sbjct: 670 LHLTETTIVDGGILSLNAIFSLCELDILGCNILEITIDWRCTIQREIIPQFQNIRTMTIH 729
Query: 447 GCGELRCLFSSSIVNSFIRLQHLEIDECPILEEIIVIDQQERK--NVV---FPQLQFLKM 501
C LR L + L L + ECP +EE+I D+ K N F L L +
Sbjct: 730 RCEYLRDLTWLLLAPC---LGELSVSECPQMEEVISKDKAMAKLGNTSEQPFQNLTKLVL 786
Query: 502 VDLEKLTSFCTGDVHIEFPTLETLEVIRCPE 532
L KL S + FP LE L + RCPE
Sbjct: 787 DGLPKLESIYW--TPLPFPVLEYLVIRRCPE 815
Score = 78 (32.5 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 32/131 (24%), Positives = 64/131 (48%)
Query: 16 EEARARVYTLVYKLKASCMLLEHGSKNEHWFSMHDVVRDVAIAIATREQNVLTMR--YEL 73
EEA + Y ++ L +L+E G+ N MH +VR++A+ IA+ V+ +++
Sbjct: 433 EEAEIQGYEIICDLVRMRLLMESGNGN--CVKMHGMVREMALWIASEHFVVVGGERIHQM 490
Query: 74 VNSREWLDEGALKFYTSIVLHDSKMNVLLPEVLECPQLQLLSLWTEKSSLITLPDNFFRK 133
+N +W + TS + + + + +C +L L ++ L + FF+
Sbjct: 491 LNVNDWRMIRRMSV-TSTQIQN------ISDSPQCSELTTL-VFRRNRHLKWISGAFFQW 542
Query: 134 LTQVRVLDLTY 144
+T + VLDL++
Sbjct: 543 MTGLVVLDLSF 553
Score = 52 (23.4 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 166 YCSELQDIAVIGELKNLEILCL 187
Y S LQ++ VI L NL++L L
Sbjct: 600 YTSNLQEVDVIASLLNLQVLRL 621
>UNIPROTKB|F1NRN7 [details] [associations]
symbol:SHOC2 "Leucine-rich repeat protein SHOC-2"
species:9031 "Gallus gallus" [GO:0000164 "protein phosphatase type
1 complex" evidence=IEA] [GO:0046579 "positive regulation of Ras
protein signal transduction" evidence=IEA] InterPro:IPR001611
InterPro:IPR027036 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
PANTHER:PTHR23155:SF38 IPI:IPI00600917 EMBL:AADN02030891
Ensembl:ENSGALT00000014266 Uniprot:F1NRN7
Length = 529
Score = 118 (46.6 bits), Expect = 0.00092, P = 0.00092
Identities = 100/415 (24%), Positives = 167/415 (40%)
Query: 60 ATREQNVLTMRYELVNSREWL--DEGALKFYTSIVLHDSKMNVLLPEVLE-CPQLQLLSL 116
A +E LT Y N + L + G L ++ L ++ + L P+ L+ +L++L L
Sbjct: 118 AVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSENSLTSL-PDSLDNLKKLRMLDL 176
Query: 117 WTEKSSLITLPDNFFRKLTQVRVLDLTYMHXXXXXXXXXXXXXXXXXXXYCSELQDI-AV 175
K L +P +R LT + L L + ++++ + A
Sbjct: 177 RHNK--LREIPSVVYR-LTSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAE 233
Query: 176 IGELKNLEILCLRGSYIEQLPVEIGQLTXXXXXXXXXXXXXQVIPPNVLSNLSHLEELYI 235
IGEL NL L + + +E LP EIG T + P + NLS L L +
Sbjct: 234 IGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDL--PETIGNLSSLSRLGL 291
Query: 236 RSFNKWEVEVEAAGVKNASLEELKRLPNLTTLELCIPDVNTLPKGLFFEKLERYRICIGR 295
R +N+ + + K + L+EL L N +++TLP+GL ++ + + R
Sbjct: 292 R-YNRLSA-IPKSLAKCSELDELN-LEN--------NNISTLPEGLLSSLVKLTSLTLAR 340
Query: 296 WCWEDT---SPTCSRTFRLLLGTDNCIS------FKSGHIVQLQRIEDLCLSGLP-D--- 342
C++ P+ T L N I+ F ++ ++D L+ LP D
Sbjct: 341 NCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGT 400
Query: 343 -QDIIEL--VNNKLGSYSSQLKHLWVEGCQAPSPKESKRCKESTSEMRS-NEIILEDHV- 397
++EL N+L + L S K+ +R E+ LE++
Sbjct: 401 WTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKL 460
Query: 398 -NVPNTF-FLKGGLPNLETLELYNVNVERIWKSQLPAMSCGIQTLTRLIVYGCGE 450
++PN +LK +L+ L L N +QL + GI LT L G GE
Sbjct: 461 ESLPNEIAYLK----DLQKLVLTN--------NQLTTLPRGIGHLTNLTHLGLGE 503
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 552 520 0.00089 119 3 11 22 0.36 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 624 (66 KB)
Total size of DFA: 316 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.03u 0.09s 41.12t Elapsed: 00:00:02
Total cpu time: 41.04u 0.09s 41.13t Elapsed: 00:00:02
Start: Fri May 10 13:04:09 2013 End: Fri May 10 13:04:11 2013