BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040305
(80 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1
Length = 1025
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 6 EDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ----V 61
+DF+V S +PS EA +RWRS+ +VKNR RRF M++NL AE + +IQ V
Sbjct: 6 KDFEVA---SKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRV 62
Query: 62 LFY 64
+FY
Sbjct: 63 VFY 65
>sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1
Length = 1014
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
Query: 5 SEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA------RDHKLK 58
+E+FDV ++ H SEE L++WR+ C +VKN +RRF NL+ EA KL+
Sbjct: 6 NENFDV---KAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQEKLR 62
Query: 59 IQVL 62
I VL
Sbjct: 63 IAVL 66
>sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2
Length = 1015
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 10/67 (14%)
Query: 2 FFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEA------RDH 55
+ NS +FDV ++ H SEE L++WR+ C++VKN +RRF NL+ EA
Sbjct: 4 YLNS-NFDV---KAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59
Query: 56 KLKIQVL 62
KL+I VL
Sbjct: 60 KLRIAVL 66
>sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type
OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3
SV=1
Length = 1039
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 6 EDFDVQPWRSVHPSEEALKRWRSACA-IVKNRRRRFCMVTNLA----NHAEARDHKLKIQ 60
E+FDV + +PSEEA +RWR A IVKNRRRRF V +L + A+ R + KI+
Sbjct: 10 ENFDVP---AKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQEKIR 66
Query: 61 VLFYSLLSFLLF 72
V Y + L+F
Sbjct: 67 VALYVQQAALIF 78
>sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza
sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1
Length = 1043
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 17 HPSEEALKRWRSACA-IVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
+PSEEA +RWR A +VKNRRRRF MV +L ++A + KIQ
Sbjct: 21 NPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQ 65
>sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type
OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3
SV=1
Length = 1017
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 6 EDFDVQPWRSVHPSEEALKRWRSACA-IVKNRRRRFCMVTNL----ANHAEARDHKLKIQ 60
E FDV + +PSEEA +RWR A IVKNRRRRF V +L + A+ R + KI+
Sbjct: 10 EHFDVP---AKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQEKIR 66
Query: 61 VLFYSLLSFLLF 72
V Y + L+F
Sbjct: 67 VALYVQQAALIF 78
>sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis
thaliana GN=ACA1 PE=1 SV=3
Length = 1020
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 2 FFNSEDFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEAR------DH 55
+ N DV+P S S+EAL+RWR C IVKN +RRF NL+ +EA
Sbjct: 4 YLNENFGDVKPKNS---SDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60
Query: 56 KLKIQVL 62
K ++ VL
Sbjct: 61 KFRVAVL 67
>sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza
sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1
Length = 1020
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 14 RSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEAR------DHKLKIQVL 62
++ + SEEAL+RWR C +VKN +RRF NL EA+ KL++ VL
Sbjct: 13 KAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVL 67
>sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1
Length = 1030
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
Query: 7 DFDVQPWRSVHPSEEALKRWRSACAIVKNRRRRFCMVTNLANHAEARDHKLKIQ 60
DF+V+ + +PS EA +RWRS+ +IVKNR RRF + +L A+ + K +IQ
Sbjct: 7 DFEVE---AKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQ 57
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.333 0.139 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,036,797
Number of Sequences: 539616
Number of extensions: 740569
Number of successful extensions: 2969
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2955
Number of HSP's gapped (non-prelim): 10
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)