Your job contains 1 sequence.
>040307
MQSCSEKKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDF
SADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTS
EFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVF
ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD
IRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGD
VEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040307
(339 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090792 - symbol:LWD2 "AT3G26640" species:3702... 961 1.1e-96 1
TAIR|locus:2010356 - symbol:ATAN11 "AT1G12910" species:37... 957 2.9e-96 1
TAIR|locus:2153914 - symbol:TTG1 "AT5G24520" species:3702... 892 2.2e-89 1
ZFIN|ZDB-GENE-030131-9511 - symbol:dcaf7 "ddb1 and cul4 a... 790 1.4e-78 1
DICTYBASE|DDB_G0275925 - symbol:wdr68 "WD40 repeat-contai... 782 1.0e-77 1
UNIPROTKB|Q5ZIT1 - symbol:DCAF7 "Uncharacterized protein"... 779 2.1e-77 1
UNIPROTKB|Q32L87 - symbol:WDR68 "WD repeat domain 68" spe... 779 2.1e-77 1
UNIPROTKB|E2REP1 - symbol:DCAF7 "Uncharacterized protein"... 779 2.1e-77 1
UNIPROTKB|P61962 - symbol:DCAF7 "DDB1- and CUL4-associate... 779 2.1e-77 1
UNIPROTKB|F2Z564 - symbol:DCAF7 "Uncharacterized protein"... 779 2.1e-77 1
MGI|MGI:1919083 - symbol:Dcaf7 "DDB1 and CUL4 associated ... 779 2.1e-77 1
WB|WBGene00009977 - symbol:swan-1 species:6239 "Caenorhab... 540 4.4e-52 1
UNIPROTKB|Q93758 - symbol:swan-1 "Protein SWAN-1" species... 540 4.4e-52 1
POMBASE|SPBC17D11.08 - symbol:SPBC17D11.08 "WD repeat pro... 278 1.8e-41 2
UNIPROTKB|G4MXS3 - symbol:MGG_08065 "WD domain-containing... 233 2.9e-36 3
ASPGD|ASPL0000042232 - symbol:AN1695 species:162425 "Emer... 235 2.6e-26 2
SGD|S000006168 - symbol:YPL247C "Putative protein of unkn... 222 6.2e-26 3
UNIPROTKB|B4E039 - symbol:DCAF7 "DDB1- and CUL4-associate... 234 1.2e-19 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 192 4.4e-13 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 191 1.7e-12 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 183 5.4e-12 1
CGD|CAL0004918 - symbol:orf19.384 species:5476 "Candida a... 183 2.5e-11 1
UNIPROTKB|Q59QD4 - symbol:CaO19.384 "Putative uncharacter... 183 2.5e-11 1
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 175 2.4e-10 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 170 5.8e-10 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 166 1.2e-09 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 161 2.4e-09 1
UNIPROTKB|Q2HJ56 - symbol:PWP1 "Periodic tryptophan prote... 163 3.9e-09 1
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 163 4.2e-09 1
MGI|MGI:1914735 - symbol:Pwp1 "PWP1 homolog (S. cerevisia... 160 8.5e-09 1
UNIPROTKB|Q13610 - symbol:PWP1 "Periodic tryptophan prote... 159 1.1e-08 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 152 2.5e-08 1
DICTYBASE|DDB_G0276797 - symbol:lysA "peptidoglycan-bindi... 159 4.6e-08 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 149 5.6e-08 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 152 5.6e-08 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 149 6.6e-08 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 147 1.1e-07 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 146 1.3e-07 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 146 1.5e-07 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 145 1.9e-07 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 145 1.9e-07 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 145 1.9e-07 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 143 2.8e-07 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 143 2.8e-07 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 143 2.9e-07 1
ZFIN|ZDB-GENE-040426-1417 - symbol:wdr77 "WD repeat domai... 142 3.6e-07 1
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 143 3.7e-07 2
ZFIN|ZDB-GENE-040426-1049 - symbol:pwp1 "PWP1 homolog (S.... 145 4.0e-07 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 144 4.4e-07 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 140 6.4e-07 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 140 7.2e-07 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 142 7.3e-07 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 136 7.6e-07 2
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 139 8.9e-07 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 139 9.2e-07 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 139 9.2e-07 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 138 1.2e-06 1
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 138 1.2e-06 1
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 138 1.2e-06 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 137 1.5e-06 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 139 1.7e-06 1
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 138 1.9e-06 1
DICTYBASE|DDB_G0287817 - symbol:wdr24 "WD40 repeat-contai... 142 2.4e-06 1
UNIPROTKB|B4MU54 - symbol:GK23981 "Ribosome biogenesis pr... 137 2.4e-06 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 137 2.5e-06 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 135 2.6e-06 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 137 2.6e-06 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 137 2.7e-06 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 137 2.7e-06 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 136 3.0e-06 1
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 133 4.1e-06 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 133 4.3e-06 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 134 5.8e-06 1
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 133 6.2e-06 1
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 134 7.3e-06 1
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 133 8.4e-06 1
TAIR|locus:2174784 - symbol:FAS2 "AT5G64630" species:3702... 130 8.7e-06 2
CGD|CAL0004530 - symbol:CDH1 species:5476 "Candida albica... 133 1.2e-05 1
UNIPROTKB|Q5ACY4 - symbol:CDH1 "Putative uncharacterized ... 133 1.2e-05 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 129 1.2e-05 1
FB|FBgn0034937 - symbol:fzr2 "fizzy-related 2" species:72... 131 1.3e-05 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 132 1.4e-05 1
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 128 1.4e-05 1
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 128 1.6e-05 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 128 1.6e-05 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 128 1.6e-05 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 127 1.7e-05 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 128 1.7e-05 1
UNIPROTKB|P16520 - symbol:GNB3 "Guanine nucleotide-bindin... 127 2.1e-05 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 123 2.8e-05 2
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 123 2.8e-05 2
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 123 2.8e-05 2
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 123 2.8e-05 2
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 125 3.4e-05 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 127 3.6e-05 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 131 3.6e-05 2
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 122 3.6e-05 2
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 122 3.6e-05 2
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 122 3.6e-05 2
UNIPROTKB|G4MYQ9 - symbol:MGG_08133 "Pre-mRNA-processing ... 128 3.7e-05 1
WARNING: Descriptions of 120 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2090792 [details] [associations]
symbol:LWD2 "AT3G26640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0043153 "entrainment of
circadian clock by photoperiod" evidence=IEP] [GO:0048573
"photoperiodism, flowering" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0048511 GO:GO:0048573
GO:GO:0043153 eggNOG:NOG314410 HOGENOM:HOG000260968 EMBL:X98130
EMBL:AB026648 ProtClustDB:CLSN2682478 EMBL:X97488 EMBL:BT004214
EMBL:AY086141 EMBL:BT020361 IPI:IPI00540911 RefSeq:NP_189298.1
UniGene:At.19781 ProteinModelPortal:Q38960 SMR:Q38960 STRING:Q38960
PaxDb:Q38960 PRIDE:Q38960 EnsemblPlants:AT3G26640.1 GeneID:822276
KEGG:ath:AT3G26640 GeneFarm:2845 TAIR:At3g26640 InParanoid:Q38960
OMA:HSSSHIC PhylomeDB:Q38960 Genevestigator:Q38960 Uniprot:Q38960
Length = 346
Score = 961 (343.3 bits), Expect = 1.1e-96, P = 1.1e-96
Identities = 182/335 (54%), Positives = 234/335 (69%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++TY A W I + WS+R D+K RLA+ S +E Y N++E+V + + +D L
Sbjct: 17 KRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEIVQLDESNGEIRSDPNL 76
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDD--RTELKSLLNSNKTSEFSS 124
F+HPY PT +F P +E PD++ATS D LRLW I DD R ELKS L+S+K SEFS
Sbjct: 77 CFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRISDDESRVELKSCLSSDKNSEFSG 136
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVFASVS 184
ITSFDW + RR+ T S+DTTC IWDI+RE+++TQL+AHD+EVYDI+WGG VFASVS
Sbjct: 137 PITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVGVFASVS 196
Query: 185 GDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFP 244
D SVRVFDLRDKE STIIYE+ PL+RL WNK DPR+MATV M S K+VVLDIRFP
Sbjct: 197 EDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMATVIMGSAKIVVLDIRFP 256
Query: 245 TNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
PVV L +H+ SVN I+WAP +CS DDS+ALIW++ G GG ++P
Sbjct: 257 ALPVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALIWDISSMGQHV-EGG----LDPI 311
Query: 305 LCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
L Y + AE+ ++WS + DW+AIAF NKLQ+L+V
Sbjct: 312 LAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV 346
>TAIR|locus:2010356 [details] [associations]
symbol:ATAN11 "AT1G12910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=NAS] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEP] [GO:0048573 "photoperiodism, flowering"
evidence=RCA;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009718 GO:GO:0048511 GO:GO:0044212
EMBL:AC012187 GO:GO:0048573 GO:GO:0043153 eggNOG:NOG314410
OMA:NKVQIVS HOGENOM:HOG000260968 KO:K11805 UniGene:At.23958
EMBL:U94746 EMBL:AY093101 EMBL:AY128776 EMBL:AY087676
IPI:IPI00520024 PIR:G86262 RefSeq:NP_172751.1 UniGene:At.62609
ProteinModelPortal:Q9LPV9 SMR:Q9LPV9 STRING:Q9LPV9 PaxDb:Q9LPV9
PRIDE:Q9LPV9 EnsemblPlants:AT1G12910.1 GeneID:837849
KEGG:ath:AT1G12910 GeneFarm:2811 TAIR:At1g12910 InParanoid:Q9LPV9
PhylomeDB:Q9LPV9 ProtClustDB:CLSN2682478 Genevestigator:Q9LPV9
Uniprot:Q9LPV9
Length = 346
Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
Identities = 184/336 (54%), Positives = 232/336 (69%)
Query: 6 EKKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNR 65
+K+ ++TY A W I + WSVR D+K RLA+ S LE Y N++E+V + + +D
Sbjct: 16 QKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAITSLLEQYPNRVEIVQLDESNGEIRSDPN 75
Query: 66 LIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDD--RTELKSLLNSNKTSEFS 123
L F+HPY PT F P +E PD++ATS D LRLW I DD R ELKS LNSNK SEF
Sbjct: 76 LSFEHPYPPTKTIFIPDKECQRPDLLATSSDFLRLWRIADDHSRVELKSCLNSNKNSEFC 135
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVFASV 183
+TSFDW + RR+ T S DTTC IWDI+RE ++TQL+AHD+EV+DI+WGG VFASV
Sbjct: 136 GPLTSFDWNEAEPRRIGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVGVFASV 195
Query: 184 SGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF 243
S D SVRVFDLRDKE STIIYE+ D PL+RL WNK DPR+MAT+ MDS KVVVLDIRF
Sbjct: 196 SADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRF 255
Query: 244 PTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEP 303
P PVV L +H+ SVN I+WAP +C+ DDS+ALIW++ G GG ++P
Sbjct: 256 PALPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDISSMGQHV-EGG----LDP 310
Query: 304 ELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
L Y + AEI ++WS + DW+AIAF KLQ+L+V
Sbjct: 311 ILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 346
>TAIR|locus:2153914 [details] [associations]
symbol:TTG1 "AT5G24520" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0010026 "trichome
differentiation" evidence=IMP] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032880 "regulation of protein localization"
evidence=RCA;IMP] [GO:0009723 "response to ethylene stimulus"
evidence=IEP] [GO:0009733 "response to auxin stimulus"
evidence=IEP] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0009957
"epidermal cell fate specification" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009733 GO:GO:0009723 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0032880
EMBL:AB010068 eggNOG:NOG314410 HOGENOM:HOG000260968 GO:GO:0009957
GO:GO:0010026 ProtClustDB:CLSN2682478 EMBL:AJ133743 EMBL:AJ251522
EMBL:AJ251523 EMBL:BT020231 EMBL:BT020513 EMBL:AK227211
IPI:IPI00520475 RefSeq:NP_197840.1 RefSeq:NP_851069.1
RefSeq:NP_851070.1 UniGene:At.28124 ProteinModelPortal:Q9XGN1
SMR:Q9XGN1 IntAct:Q9XGN1 STRING:Q9XGN1 PaxDb:Q9XGN1 PRIDE:Q9XGN1
EnsemblPlants:AT5G24520.1 EnsemblPlants:AT5G24520.2
EnsemblPlants:AT5G24520.3 GeneID:832523 KEGG:ath:AT5G24520
GeneFarm:3759 TAIR:At5g24520 InParanoid:Q9XGN1 OMA:RACANAV
PhylomeDB:Q9XGN1 Genevestigator:Q9XGN1 GermOnline:AT5G24520
Uniprot:Q9XGN1
Length = 341
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 175/342 (51%), Positives = 243/342 (71%)
Query: 3 SCSEKKPGVHTYMAQWPISTVAWS-VRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFS 61
S S + V TY + +P+ +A+S +R R+AVGSFLEDY+N+I++++F+ ++
Sbjct: 8 SLSRSETAV-TYDSPYPLYAMAFSSLRSSSGHRIAVGSFLEDYNNRIDILSFDSDSMTVK 66
Query: 62 ADNRLIFDHPYTPTNIAFFPSE--ETLNPDIVATSGDSLRLWEIHDDRTELK--SLLNSN 117
L F+HPY PT + F P + D++A+SGD LRLWEI++D + ++ S+LN++
Sbjct: 67 PLPNLSFEHPYPPTKLMFSPPSLRRPSSGDLLASSGDFLRLWEINEDSSTVEPISVLNNS 126
Query: 118 KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGF 177
KTSEF + +TSFDW + +R+ TCS+DTTC IWDI++ ++ETQL+AHD+EV+DI+WG
Sbjct: 127 KTSEFCAPLTSFDWNDVEPKRLGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWGEA 186
Query: 178 NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVV 237
VFASVS D SVR+FDLRDKE STIIYE+P D PLLRL WNK D R+MAT+ MDSNKVV
Sbjct: 187 RVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVV 246
Query: 238 VLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
+LDIR PT PV L +H+ SVN I+WAP + +CS DD++ALIWE+ P GP
Sbjct: 247 ILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGGDDTQALIWEL--PTV----AGP 300
Query: 298 SGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
+G ++P Y + +EIN ++WS + DWI IAF NK+QLL+V
Sbjct: 301 NG-IDPMSVYSAGSEINQLQWSSSQPDWIGIAFANKMQLLRV 341
>ZFIN|ZDB-GENE-030131-9511 [details] [associations]
symbol:dcaf7 "ddb1 and cul4 associated factor 7"
species:7955 "Danio rerio" [GO:0051216 "cartilage development"
evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-9511 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0051216
eggNOG:NOG314410 OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968
HOVERGEN:HBG050497 KO:K11805 OrthoDB:EOG40P46Z
GeneTree:ENSGT00390000006939 EMBL:CU062431 EMBL:BC053157
IPI:IPI00507194 RefSeq:NP_956363.1 UniGene:Dr.79208 STRING:Q7T3E0
Ensembl:ENSDART00000058221 GeneID:337565 KEGG:dre:337565
InParanoid:Q7T3E0 NextBio:20812303 Uniprot:Q7T3E0
Length = 342
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 159/348 (45%), Positives = 224/348 (64%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK++LV E+S+F N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLEEESSEFVCRNT- 64
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAI 126
FDHPY T I + P + + PD++ATSGD LR+W ++D T L+ LLN+NK S+F + +
Sbjct: 65 -FDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVNDTETRLECLLNNNKNSDFCAPL 123
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDR-EIL----------ETQLVAHDREVYDISW- 174
TSFDW D + T S+DTTC IW ++ ++L +TQL+AHD+EVYDI++
Sbjct: 124 TSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 183
Query: 175 ---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
GG ++FASV D SVR+FDLR E STIIYE+P Q PLLRL WNK DP ++AT+ M
Sbjct: 184 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDP-QHHPLLRLCWNKQDPNYLATMAM 242
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
D +VV+LD+R P PV L+ H VNGI+WAP +C+ ADD +ALIW++
Sbjct: 243 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI------ 296
Query: 292 SGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P +P L Y + EIN V+W+ + DWIAI + N L++L+V
Sbjct: 297 --QQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>DICTYBASE|DDB_G0275925 [details] [associations]
symbol:wdr68 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0275925 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 RefSeq:XP_643620.2 ProteinModelPortal:Q552R1
EnsemblProtists:DDB0267164 GeneID:8620207 KEGG:ddi:DDB_G0275925
eggNOG:NOG314410 OMA:NKVQIVS ProtClustDB:CLSZ2735624 Uniprot:Q552R1
Length = 325
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 162/337 (48%), Positives = 225/337 (66%)
Query: 6 EKKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNR 65
EKK ++TY + W I ++WS R +R RLA+GSFLEDY+N+++++ N ET F
Sbjct: 2 EKKR-IYTYNSPWVIYGLSWSSRVNRPFRLAIGSFLEDYTNRVDVIQLNEETDQFEVVCG 60
Query: 66 LIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRT--ELKSLLNSNKTSEFS 123
F+HPY PT + P + + PD++AT+GD LRLWE+ ++ +LKSLL +N SEF
Sbjct: 61 --FEHPYPPTKCMWIPDKNSNRPDLLATTGDYLRLWEVGSNQRSIKLKSLL-TNVISEFC 117
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFAS 182
+ ++SFDW D +AT S+DTTC IW+I+ +TQL+AHD+EV+DI++ G ++FAS
Sbjct: 118 APLSSFDWNETDPSLLATSSIDTTCTIWNIETGQAKTQLIAHDKEVFDIAFARGTDLFAS 177
Query: 183 VSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR 242
V D S+R+FDLR+ E STIIYE P PLLRL WNK DP ++AT+ DS KV++LDIR
Sbjct: 178 VGADGSLRMFDLRNLEHSTIIYETP-SFVPLLRLCWNKQDPNYLATIQQDSPKVIILDIR 236
Query: 243 FPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVE 302
P+ P L H+ +VNGISWAP +C+V+DD +ALIW++ S P D
Sbjct: 237 VPSVPAAELVFHKSAVNGISWAPHSSCHICTVSDDKQALIWDL------SSMPKPIED-- 288
Query: 303 PELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P L Y ++AEIN + WS + DWIAIAF + LQ+LKV
Sbjct: 289 PLLTYNALAEINQLSWSSSQPDWIAIAFSSHLQILKV 325
>UNIPROTKB|Q5ZIT1 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314410
OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968 HOVERGEN:HBG050497
KO:K11805 OrthoDB:EOG40P46Z GeneTree:ENSGT00390000006939
EMBL:AADN02056761 EMBL:AADN02056762 EMBL:AADN02056763 EMBL:AJ720703
IPI:IPI00594361 RefSeq:NP_001072972.1 UniGene:Gga.13087 SMR:Q5ZIT1
STRING:Q5ZIT1 Ensembl:ENSGALT00000000697 GeneID:771554
KEGG:gga:771554 InParanoid:Q5ZIT1 NextBio:20921754 Uniprot:Q5ZIT1
Length = 342
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 157/348 (45%), Positives = 224/348 (64%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK++LV + E+S+F N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT- 64
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAI 126
FDHPY T + + P + + PD++ATSGD LR+W + + T L+ LLN+NK S+F + +
Sbjct: 65 -FDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 123
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDR-EIL----------ETQLVAHDREVYDISW- 174
TSFDW D + T S+DTTC IW ++ ++L +TQL+AHD+EVYDI++
Sbjct: 124 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 183
Query: 175 ---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
GG ++FASV D SVR+FDLR E STIIYE+P Q PLLRL WNK DP ++AT+ M
Sbjct: 184 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDP-QHHPLLRLCWNKQDPNYLATMAM 242
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
D +VV+LD+R P PV L+ H VNGI+WAP +C+ ADD +ALIW++
Sbjct: 243 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI------ 296
Query: 292 SGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P +P L Y + EIN V+W+ + DWIAI + N L++L+V
Sbjct: 297 --QQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|Q32L87 [details] [associations]
symbol:WDR68 "WD repeat domain 68" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:NOG314410
OMA:NKVQIVS CTD:10238 HOGENOM:HOG000260968 HOVERGEN:HBG050497
KO:K11805 OrthoDB:EOG40P46Z GeneTree:ENSGT00390000006939
EMBL:DAAA02049321 EMBL:BC109703 IPI:IPI00689532
RefSeq:NP_001033214.1 UniGene:Bt.31136 SMR:Q32L87 STRING:Q32L87
Ensembl:ENSBTAT00000004550 GeneID:516678 KEGG:bta:516678
InParanoid:Q32L87 NextBio:20872286 Uniprot:Q32L87
Length = 342
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 157/348 (45%), Positives = 224/348 (64%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK++LV + E+S+F N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT- 64
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAI 126
FDHPY T + + P + + PD++ATSGD LR+W + + T L+ LLN+NK S+F + +
Sbjct: 65 -FDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 123
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDR-EIL----------ETQLVAHDREVYDISW- 174
TSFDW D + T S+DTTC IW ++ ++L +TQL+AHD+EVYDI++
Sbjct: 124 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 183
Query: 175 ---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
GG ++FASV D SVR+FDLR E STIIYE+P Q PLLRL WNK DP ++AT+ M
Sbjct: 184 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDP-QHHPLLRLCWNKQDPNYLATMAM 242
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
D +VV+LD+R P PV L+ H VNGI+WAP +C+ ADD +ALIW++
Sbjct: 243 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI------ 296
Query: 292 SGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P +P L Y + EIN V+W+ + DWIAI + N L++L+V
Sbjct: 297 --QQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|E2REP1 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 OMA:NKVQIVS
KO:K11805 GeneTree:ENSGT00390000006939 EMBL:AAEX03006356
RefSeq:XP_003639298.1 ProteinModelPortal:E2REP1 SMR:E2REP1
PRIDE:E2REP1 Ensembl:ENSCAFT00000020578 GeneID:100856670
KEGG:cfa:100856670 NextBio:20898417 Uniprot:E2REP1
Length = 342
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 157/348 (45%), Positives = 224/348 (64%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK++LV + E+S+F N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT- 64
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAI 126
FDHPY T + + P + + PD++ATSGD LR+W + + T L+ LLN+NK S+F + +
Sbjct: 65 -FDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 123
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDR-EIL----------ETQLVAHDREVYDISW- 174
TSFDW D + T S+DTTC IW ++ ++L +TQL+AHD+EVYDI++
Sbjct: 124 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 183
Query: 175 ---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
GG ++FASV D SVR+FDLR E STIIYE+P Q PLLRL WNK DP ++AT+ M
Sbjct: 184 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDP-QHHPLLRLCWNKQDPNYLATMAM 242
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
D +VV+LD+R P PV L+ H VNGI+WAP +C+ ADD +ALIW++
Sbjct: 243 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI------ 296
Query: 292 SGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P +P L Y + EIN V+W+ + DWIAI + N L++L+V
Sbjct: 297 --QQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|P61962 [details] [associations]
symbol:DCAF7 "DDB1- and CUL4-associated factor 7"
species:9606 "Homo sapiens" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 EMBL:CH471109 GO:GO:0080008
eggNOG:NOG314410 OMA:NKVQIVS EMBL:U94747 EMBL:BC001264
IPI:IPI00006754 RefSeq:NP_005819.3 UniGene:Hs.410596
ProteinModelPortal:P61962 SMR:P61962 DIP:DIP-40363N IntAct:P61962
MINT:MINT-1141032 STRING:P61962 PhosphoSite:P61962 DMDM:48428729
PaxDb:P61962 PRIDE:P61962 DNASU:10238 Ensembl:ENST00000310827
GeneID:10238 KEGG:hsa:10238 UCSC:uc002jbc.3 CTD:10238
GeneCards:GC17P061627 HGNC:HGNC:30915 HPA:HPA022948 HPA:HPA022962
MIM:605973 neXtProt:NX_P61962 PharmGKB:PA165431770
HOGENOM:HOG000260968 HOVERGEN:HBG050497 InParanoid:P61962 KO:K11805
OrthoDB:EOG40P46Z GenomeRNAi:10238 NextBio:38784
ArrayExpress:P61962 Bgee:P61962 CleanEx:HS_WDR68
Genevestigator:P61962 GermOnline:ENSG00000136485 Uniprot:P61962
Length = 342
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 157/348 (45%), Positives = 224/348 (64%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK++LV + E+S+F N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT- 64
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAI 126
FDHPY T + + P + + PD++ATSGD LR+W + + T L+ LLN+NK S+F + +
Sbjct: 65 -FDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 123
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDR-EIL----------ETQLVAHDREVYDISW- 174
TSFDW D + T S+DTTC IW ++ ++L +TQL+AHD+EVYDI++
Sbjct: 124 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 183
Query: 175 ---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
GG ++FASV D SVR+FDLR E STIIYE+P Q PLLRL WNK DP ++AT+ M
Sbjct: 184 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDP-QHHPLLRLCWNKQDPNYLATMAM 242
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
D +VV+LD+R P PV L+ H VNGI+WAP +C+ ADD +ALIW++
Sbjct: 243 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI------ 296
Query: 292 SGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P +P L Y + EIN V+W+ + DWIAI + N L++L+V
Sbjct: 297 --QQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>UNIPROTKB|F2Z564 [details] [associations]
symbol:DCAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 OMA:NKVQIVS
CTD:10238 KO:K11805 GeneTree:ENSGT00390000006939 EMBL:CU929939
RefSeq:XP_003131342.1 UniGene:Ssc.95972 ProteinModelPortal:F2Z564
SMR:F2Z564 PRIDE:F2Z564 Ensembl:ENSSSCT00000018826 GeneID:100514182
KEGG:ssc:100514182 Uniprot:F2Z564
Length = 342
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 157/348 (45%), Positives = 224/348 (64%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK++LV + E+S+F N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT- 64
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAI 126
FDHPY T + + P + + PD++ATSGD LR+W + + T L+ LLN+NK S+F + +
Sbjct: 65 -FDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 123
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDR-EIL----------ETQLVAHDREVYDISW- 174
TSFDW D + T S+DTTC IW ++ ++L +TQL+AHD+EVYDI++
Sbjct: 124 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 183
Query: 175 ---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
GG ++FASV D SVR+FDLR E STIIYE+P Q PLLRL WNK DP ++AT+ M
Sbjct: 184 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDP-QHHPLLRLCWNKQDPNYLATMAM 242
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
D +VV+LD+R P PV L+ H VNGI+WAP +C+ ADD +ALIW++
Sbjct: 243 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI------ 296
Query: 292 SGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P +P L Y + EIN V+W+ + DWIAI + N L++L+V
Sbjct: 297 --QQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>MGI|MGI:1919083 [details] [associations]
symbol:Dcaf7 "DDB1 and CUL4 associated factor 7"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1919083
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0080008 eggNOG:NOG314410 OMA:NKVQIVS CTD:10238
HOGENOM:HOG000260968 HOVERGEN:HBG050497 KO:K11805 OrthoDB:EOG40P46Z
EMBL:AK005902 EMBL:AK047435 EMBL:AK165674 EMBL:BC048722
IPI:IPI00262605 RefSeq:NP_082222.1 UniGene:Mm.307455
ProteinModelPortal:P61963 SMR:P61963 STRING:P61963
PhosphoSite:P61963 REPRODUCTION-2DPAGE:P61963 PaxDb:P61963
PRIDE:P61963 Ensembl:ENSMUST00000058438 GeneID:71833 KEGG:mmu:71833
GeneTree:ENSGT00390000006939 InParanoid:P61963 ChiTaRS:DCAF7
NextBio:334652 Bgee:P61963 CleanEx:MM_WDR68 Genevestigator:P61963
GermOnline:ENSMUSG00000049354 Uniprot:P61963
Length = 342
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 157/348 (45%), Positives = 224/348 (64%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK++LV + E+S+F N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNT- 64
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAI 126
FDHPY T + + P + + PD++ATSGD LR+W + + T L+ LLN+NK S+F + +
Sbjct: 65 -FDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPL 123
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDR-EIL----------ETQLVAHDREVYDISW- 174
TSFDW D + T S+DTTC IW ++ ++L +TQL+AHD+EVYDI++
Sbjct: 124 TSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFS 183
Query: 175 ---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
GG ++FASV D SVR+FDLR E STIIYE+P Q PLLRL WNK DP ++AT+ M
Sbjct: 184 RAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDP-QHHPLLRLCWNKQDPNYLATMAM 242
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
D +VV+LD+R P PV L+ H VNGI+WAP +C+ ADD +ALIW++
Sbjct: 243 DGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI------ 296
Query: 292 SGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
P +P L Y + EIN V+W+ + DWIAI + N L++L+V
Sbjct: 297 --QQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV 342
>WB|WBGene00009977 [details] [associations]
symbol:swan-1 species:6239 "Caenorhabditis elegans"
[GO:0032314 "regulation of Rac GTPase activity" evidence=IPI]
[GO:0060101 "negative regulation of phagocytosis, engulfment"
evidence=IGI] [GO:0030336 "negative regulation of cell migration"
evidence=IGI] [GO:0030516 "regulation of axon extension"
evidence=IGI] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030336 GO:GO:0030516 GO:GO:0032314
eggNOG:NOG314410 HOGENOM:HOG000260968 GeneTree:ENSGT00390000006939
EMBL:Z79756 GO:GO:0060101 PIR:T22553 RefSeq:NP_506418.1
ProteinModelPortal:Q93758 SMR:Q93758 DIP:DIP-24751N IntAct:Q93758
MINT:MINT-1099991 STRING:Q93758 PaxDb:Q93758
EnsemblMetazoa:F53C11.8.1 EnsemblMetazoa:F53C11.8.2 GeneID:179876
KEGG:cel:CELE_F53C11.8 UCSC:F53C11.8.1 CTD:179876 WormBase:F53C11.8
InParanoid:Q93758 OMA:QILDIRM NextBio:907230 Uniprot:Q93758
Length = 388
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 116/311 (37%), Positives = 173/311 (55%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIH 104
+NK+ +V ET + + P + F P + + PD++AT+ D LRLW +
Sbjct: 89 ANKVSIVQLKDETGELVETASFPMEFPANA--VGFIPDPDNVYPDLIATTSDCLRLWRVV 146
Query: 105 DDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREI------- 157
D + +++ +N S++ SA+TSFDW + R + SVDTTC I+D++
Sbjct: 147 DGKVHPDAVMINNTNSQYGSALTSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKP 206
Query: 158 -----LETQLVAHDREVYDISW----GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPV 208
L+TQL+AHD+ V+DI + GG + FA+V D S R+FDLR STI+YE+P
Sbjct: 207 TAPFTLKTQLIAHDKPVHDIEFAKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPN 266
Query: 209 QDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYG 268
++ L RL WNK +P FMA +S +V +LDIR P N + L H G VNGI+WAP
Sbjct: 267 KE-KLQRLSWNKQEPYFMALFAENSQEVQILDIRMPCNILCRLRNHTGPVNGIAWAPHSP 325
Query: 269 RRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAI 328
+C+ DDS+ALIW++ P +P L Y + E+N + W P+ +WIAI
Sbjct: 326 HHICTAGDDSQALIWDL--------QQVPRPVDDPILAYSAGGEVNQIHWGPVHSNWIAI 377
Query: 329 AFVNKLQLLKV 339
F L++L+V
Sbjct: 378 CFNKTLEILRV 388
Score = 260 (96.6 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 59/191 (30%), Positives = 100/191 (52%)
Query: 6 EKKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYS------NKIELVNFNPETSD 59
+++ ++ + + + AWS ++D K RLAVG+ + D S NK+ +V ET +
Sbjct: 45 DRRCEIYKFTSDQQLYASAWSNKNDIKFRLAVGT-VSDVSVNPCAANKVSIVQLKDETGE 103
Query: 60 FSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKT 119
+ P + F P + + PD++AT+ D LRLW + D + +++ +N
Sbjct: 104 LVETASFPMEFPANA--VGFIPDPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTN 161
Query: 120 SEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREI------------LETQLVAHDR 167
S++ SA+TSFDW + R + SVDTTC I+D++ L+TQL+AHD+
Sbjct: 162 SQYGSALTSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKPTAPFTLKTQLIAHDK 221
Query: 168 EVYDISWGGFN 178
V+DI + N
Sbjct: 222 PVHDIEFAKIN 232
>UNIPROTKB|Q93758 [details] [associations]
symbol:swan-1 "Protein SWAN-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030336 GO:GO:0030516 GO:GO:0032314
eggNOG:NOG314410 HOGENOM:HOG000260968 GeneTree:ENSGT00390000006939
EMBL:Z79756 GO:GO:0060101 PIR:T22553 RefSeq:NP_506418.1
ProteinModelPortal:Q93758 SMR:Q93758 DIP:DIP-24751N IntAct:Q93758
MINT:MINT-1099991 STRING:Q93758 PaxDb:Q93758
EnsemblMetazoa:F53C11.8.1 EnsemblMetazoa:F53C11.8.2 GeneID:179876
KEGG:cel:CELE_F53C11.8 UCSC:F53C11.8.1 CTD:179876 WormBase:F53C11.8
InParanoid:Q93758 OMA:QILDIRM NextBio:907230 Uniprot:Q93758
Length = 388
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 116/311 (37%), Positives = 173/311 (55%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIH 104
+NK+ +V ET + + P + F P + + PD++AT+ D LRLW +
Sbjct: 89 ANKVSIVQLKDETGELVETASFPMEFPANA--VGFIPDPDNVYPDLIATTSDCLRLWRVV 146
Query: 105 DDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREI------- 157
D + +++ +N S++ SA+TSFDW + R + SVDTTC I+D++
Sbjct: 147 DGKVHPDAVMINNTNSQYGSALTSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKP 206
Query: 158 -----LETQLVAHDREVYDISW----GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPV 208
L+TQL+AHD+ V+DI + GG + FA+V D S R+FDLR STI+YE+P
Sbjct: 207 TAPFTLKTQLIAHDKPVHDIEFAKINGGRDHFATVGADGSARMFDLRHLNHSTIVYEDPN 266
Query: 209 QDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYG 268
++ L RL WNK +P FMA +S +V +LDIR P N + L H G VNGI+WAP
Sbjct: 267 KE-KLQRLSWNKQEPYFMALFAENSQEVQILDIRMPCNILCRLRNHTGPVNGIAWAPHSP 325
Query: 269 RRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAI 328
+C+ DDS+ALIW++ P +P L Y + E+N + W P+ +WIAI
Sbjct: 326 HHICTAGDDSQALIWDL--------QQVPRPVDDPILAYSAGGEVNQIHWGPVHSNWIAI 377
Query: 329 AFVNKLQLLKV 339
F L++L+V
Sbjct: 378 CFNKTLEILRV 388
Score = 260 (96.6 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 59/191 (30%), Positives = 100/191 (52%)
Query: 6 EKKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYS------NKIELVNFNPETSD 59
+++ ++ + + + AWS ++D K RLAVG+ + D S NK+ +V ET +
Sbjct: 45 DRRCEIYKFTSDQQLYASAWSNKNDIKFRLAVGT-VSDVSVNPCAANKVSIVQLKDETGE 103
Query: 60 FSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKT 119
+ P + F P + + PD++AT+ D LRLW + D + +++ +N
Sbjct: 104 LVETASFPMEFPANA--VGFIPDPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTN 161
Query: 120 SEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREI------------LETQLVAHDR 167
S++ SA+TSFDW + R + SVDTTC I+D++ L+TQL+AHD+
Sbjct: 162 SQYGSALTSFDWNELEPRYIGVSSVDTTCTIYDVEVGCAIGQTKPTAPFTLKTQLIAHDK 221
Query: 168 EVYDISWGGFN 178
V+DI + N
Sbjct: 222 PVHDIEFAKIN 232
>POMBASE|SPBC17D11.08 [details] [associations]
symbol:SPBC17D11.08 "WD repeat protein, DDB1 and
CUL4-associated factor 7 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC17D11.08 GO:GO:0005829
GO:GO:0005794 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 EMBL:CU329671 GO:GO:0016567
GO:GO:0080008 eggNOG:NOG314410 HOGENOM:HOG000260968 KO:K11805
PIR:T39719 RefSeq:NP_596382.1 ProteinModelPortal:O74763
STRING:O74763 EnsemblFungi:SPBC17D11.08.1 GeneID:2539614
KEGG:spo:SPBC17D11.08 OMA:RFCSPLT OrthoDB:EOG48PQTZ
NextBio:20800771 Uniprot:O74763
Length = 435
Score = 278 (102.9 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 69/204 (33%), Positives = 108/204 (52%)
Query: 14 YMAQWPISTVAWSVRHDRKSR-LAVGSFLEDYSNKIELVNF--NPETSDFSADNRLIFDH 70
Y A W + W + S +A+GS E+ +N I+L+ + + + D
Sbjct: 47 YNAPWIPFALDWLKQGKYSSEWIAMGSLNEEPNNMIQLLKLITGDDGNSHLEKAQAATDL 106
Query: 71 PYTPTNIAFFPSEETLNPD--IVATSGDSLRLWEIH-----DDRTELKSLLNSNKTSEFS 123
Y T + + PS N D ++A++ LRLW+ D ++ L+++ + +
Sbjct: 107 EYPVTKLLWNPSSVGSNTDSQLLASTDQQLRLWKTDFEAGIDSPLLCQASLSTHVKTHNN 166
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISW--GGFNVFA 181
+ +TSFDW D + S+DTTC +WDI + +TQL+AHD+EVYD+++ NVF
Sbjct: 167 APLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFV 226
Query: 182 SVSGDCSVRVFDLRDKERSTIIYE 205
SV D SVR+FDLR + STIIYE
Sbjct: 227 SVGADGSVRMFDLRSLDHSTIIYE 250
Score = 183 (69.5 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 47/126 (37%), Positives = 62/126 (49%)
Query: 178 NVFASVSGDCSVRVFDLRDKERSTIIYE---------------NPVQDCPLLRLEWNKAD 222
NVF SV D SVR+FDLR + STIIYE +P PLLRL +D
Sbjct: 223 NVFVSVGADGSVRMFDLRSLDHSTIIYEGDSTFWKRNGDYTNASPPVSAPLLRLSACDSD 282
Query: 223 PRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALI 282
MAT +S+ V ++DIR P L H+G VN + W P +L + DD +
Sbjct: 283 VNLMATFHHNSSDVQMIDIRVPGTAYATLRGHKGDVNAVKWMPGSKSKLATCGDDCVVSL 342
Query: 283 WEVVGP 288
W++ P
Sbjct: 343 WDLDQP 348
Score = 55 (24.4 bits), Expect = 4.7e-28, Sum P(2) = 4.7e-28
Identities = 33/127 (25%), Positives = 56/127 (44%)
Query: 216 LEWNKADPRFMATVGMDSNKVVVLDIRFPTNP--VVVLSKHEGSVNGISWAPL-YGRRLC 272
++W +AT G D V + D+ P NP LS G+ G++ + Y +
Sbjct: 321 VKWMPGSKSKLATCG-DDCVVSLWDLDQPVNPSPAPTLSV-SGTTPGMTGSTSEYVTPVS 378
Query: 273 SVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCYQSMAEINVVRWSPLELDWIAIAFVN 332
SV + R E P + N P L ++ E+N + WS ++ D +A+ +
Sbjct: 379 SV-NSMR----ETASP-LNADN-----QYSPLLSWKLEHEVNNLSWS-VKNDGLAVVYGK 426
Query: 333 KLQLLKV 339
L++LKV
Sbjct: 427 SLEILKV 433
>UNIPROTKB|G4MXS3 [details] [associations]
symbol:MGG_08065 "WD domain-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001232 KO:K11805 RefSeq:XP_003715017.1
ProteinModelPortal:G4MXS3 EnsemblFungi:MGG_08065T0 GeneID:2678269
KEGG:mgr:MGG_08065 Uniprot:G4MXS3
Length = 454
Score = 233 (87.1 bits), Expect = 2.9e-36, Sum P(3) = 2.9e-36
Identities = 47/101 (46%), Positives = 65/101 (64%)
Query: 112 SLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYD 171
+LL+++KT + ++ +TS DW + T S+DTTC IWDI +TQL+AHD+EVYD
Sbjct: 195 ALLSNSKTPDHTAPLTSLDWNQVSQNLIITSSIDTTCTIWDIPSLTAKTQLIAHDKEVYD 254
Query: 172 ISW--GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+ + +VF S D SVR+FDLR E STIIYE +D
Sbjct: 255 VRFCANSVDVFVSCGQDGSVRMFDLRSLEHSTIIYEPTGKD 295
Score = 171 (65.3 bits), Expect = 2.9e-36, Sum P(3) = 2.9e-36
Identities = 42/113 (37%), Positives = 59/113 (52%)
Query: 212 PLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
PLLRL + D +AT DSN + +LD+R P ++ L H GS+N I W+PL L
Sbjct: 318 PLLRLATSPHDTHLLATFAQDSNVIRILDVRQPGQALLELRGHGGSLNCIEWSPLRRGTL 377
Query: 272 CSVADDSRALIWEVVGPGYRSG--NGGPSGDV--EPELCYQSMAEINVVRWSP 320
S ADD + LIW+++ + NG P D P +Q EI + W+P
Sbjct: 378 ASGADDCQVLIWDLLQNQSAAPPLNGAPQPDNVRSPVASWQCDYEIGNLGWTP 430
Score = 100 (40.3 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 40/156 (25%), Positives = 71/156 (45%)
Query: 34 RLAVGSFLEDYSNKIELVNFN-----PET-SDFSADNRLIFD------HPYTPTNIAF-- 79
+LA+GS+LED N I++++ PE S + L F H Y T + +
Sbjct: 82 KLAIGSYLEDGHNFIQILDTQVVPTPPEAYSQGGSRTCLEFTKVAEATHSYPVTRLLWEP 141
Query: 80 -FPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFD-WAGFDTR 137
P+ + + D++ATSGD LRLW + D + S N N++S + T A
Sbjct: 142 HSPNSQKQSTDLLATSGDHLRLWSLPSDASSSMSN-NINRSSRDPAPPTKLTPLALLSNS 200
Query: 138 RVATCSVDTTCVIWD-IDREILETQLVAHDREVYDI 172
+ + T + W+ + + ++ T + ++DI
Sbjct: 201 KTPDHTAPLTSLDWNQVSQNLIITSSIDTTCTIWDI 236
Score = 69 (29.3 bits), Expect = 2.9e-36, Sum P(3) = 2.9e-36
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 10 GVHTYMAQWPISTVAWSV---RHDRKSRLAVGSFLEDYSNKIELVN 52
G YMA W + W + + +LA+GS+LED N I++++
Sbjct: 55 GTSNYMAPWALYAFDWCKYPPQGNGAGKLAIGSYLEDGHNFIQILD 100
Score = 37 (18.1 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 313 INVVRWSPLELDWIA 327
+N + WSPL +A
Sbjct: 364 LNCIEWSPLRRGTLA 378
>ASPGD|ASPL0000042232 [details] [associations]
symbol:AN1695 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001307 EMBL:AACD01000026
eggNOG:NOG314410 KO:K11805 OrthoDB:EOG48PQTZ RefSeq:XP_659299.1
ProteinModelPortal:Q5BCN5 EnsemblFungi:CADANIAT00008338
GeneID:2875575 KEGG:ani:AN1695.2 HOGENOM:HOG000189437 OMA:RFCANSV
Uniprot:Q5BCN5
Length = 609
Score = 235 (87.8 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 47/96 (48%), Positives = 63/96 (65%)
Query: 112 SLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYD 171
+LL+++K+ E ++ ITS DW + T S+DTTC IWDI +TQL+AHD+EVYD
Sbjct: 344 ALLSNSKSPEHTAPITSLDWNTISPSLIITSSIDTTCTIWDIPTLTAKTQLIAHDKEVYD 403
Query: 172 ISW--GGFNVFASVSGDCSVRVFDLRDKERSTIIYE 205
+ + +VF S D SVR+FDLR E STIIYE
Sbjct: 404 VRFCANSVDVFVSCGADGSVRMFDLRSLEHSTIIYE 439
Score = 159 (61.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 53/187 (28%), Positives = 85/187 (45%)
Query: 154 DREILETQLVAHDREVYDISWGG---FNVFASVSGDCSVRVFDLRDKERSTIIYEN---- 206
D+E+ + + A+ +V+ +S G +F S + S +++ +K + N
Sbjct: 398 DKEVYDVRFCANSVDVF-VSCGADGSVRMFDLRSLEHSTIIYEPTEKNEKLMSPGNGSPS 456
Query: 207 -PVQDCP--LLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P P LLR+ + D +AT DSN V VLD+R P ++ L H +N + W
Sbjct: 457 APTTTWPPPLLRISASPHDAHLLATFSQDSNIVRVLDVRQPGQALLELKGHSAPLNTVEW 516
Query: 264 APLYGRRLCSVADDSRALIWEVVG--------PGYRSGNGGPSGDVE--PELCYQSMAEI 313
+P L S ADD L+W+++ PG + G PS E P +Q EI
Sbjct: 517 SPNRRGVLASGADDCLVLLWDLINQHNTTPVPPGVHNP-GAPSTTTERGPAAAWQCDYEI 575
Query: 314 NVVRWSP 320
+ + WSP
Sbjct: 576 SNISWSP 582
Score = 119 (46.9 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 17 QWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFN-----PETSDFSADN-RLIF-- 68
+WPIS S ++A+GS+LED+ N I++++ + P+T D SA +L +
Sbjct: 219 KWPISGNPGSFG----GKIALGSYLEDHHNYIQILDTHLAYPDPDTPDASAGELKLEYVK 274
Query: 69 ----DHPYTPTNIAFFP-SEETLNPDIVATSGDSLRLWEIHDDRTELKS 112
H Y T I + P S + + D++ATSGD LRLW + + + + S
Sbjct: 275 SAEATHSYPVTRILWEPPSSQKQSTDLLATSGDHLRLWSLPNSQPQHSS 323
Score = 53 (23.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 205 ENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPT 245
++P P+ L+WN P + T +D+ + DI PT
Sbjct: 350 KSPEHTAPITSLDWNTISPSLIITSSIDTT-CTIWDI--PT 387
Score = 45 (20.9 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 15/53 (28%), Positives = 20/53 (37%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDS 97
S + + N PE A N HP P + + S +T P I S S
Sbjct: 10 SRRSTIYNRQPEELHIPAGNSTSGGHPRQPMSHEYPTSPDTHLPSINIHSSSS 62
Score = 39 (18.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 8/45 (17%), Positives = 21/45 (46%)
Query: 246 NPVVVLS-----KHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
+P+ +LS +H + + W + + + + D+ IW++
Sbjct: 341 SPLALLSNSKSPEHTAPITSLDWNTISPSLIITSSIDTTCTIWDI 385
>SGD|S000006168 [details] [associations]
symbol:YPL247C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000006168 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BK006949 EMBL:Z67751 eggNOG:NOG314410
HOGENOM:HOG000260968 KO:K11805 GeneTree:ENSGT00390000006939
OrthoDB:EOG48PQTZ EMBL:Z73603 PIR:S61017 RefSeq:NP_015077.1
ProteinModelPortal:Q12523 SMR:Q12523 DIP:DIP-6366N IntAct:Q12523
MINT:MINT-685692 STRING:Q12523 PaxDb:Q12523 PeptideAtlas:Q12523
PRIDE:Q12523 EnsemblFungi:YPL247C GeneID:855829 KEGG:sce:YPL247C
CYGD:YPL247c OMA:NTFPPVT NextBio:980386 Genevestigator:Q12523
GermOnline:YPL247C Uniprot:Q12523
Length = 523
Score = 222 (83.2 bits), Expect = 6.0e-18, Sum P(2) = 6.0e-18
Identities = 44/85 (51%), Positives = 57/85 (67%)
Query: 126 ITSFDWAGFDTRRVATCSVDTTCVIWDIDRE-ILETQLVAHDREVYDISW--GGFNVFAS 182
ITSFDW DT + + S+DTTC++WD+ ++TQL+AHD EV+D+ + +FAS
Sbjct: 246 ITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEVFDVRFLTKSTQLFAS 305
Query: 183 VSGDCSVRVFDLRDKERSTIIYENP 207
GD SVRVFDLR STIIYE P
Sbjct: 306 CGGDGSVRVFDLRSLAHSTIIYEPP 330
Score = 220 (82.5 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 54/123 (43%), Positives = 67/123 (54%)
Query: 179 VFASVSGDCSVRVFDLRDKERSTIIYENPVQDC---------P-------LLRLEWNKAD 222
+FAS GD SVRVFDLR STIIYE P P LLRLE + D
Sbjct: 302 LFASCGGDGSVRVFDLRSLAHSTIIYEPPSSSVSGATAGTITPSSKGSDALLRLEPSPYD 361
Query: 223 PRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALI 282
P +AT DSNK+++LD+R P +P++ L H SVNGI W P L S DD + L
Sbjct: 362 PNVLATFAADSNKIIILDMRNPESPILNLQGHGSSVNGIKWHPTKRNVLLSCGDDCQVLY 421
Query: 283 WEV 285
W++
Sbjct: 422 WDL 424
Score = 111 (44.1 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 44/192 (22%), Positives = 89/192 (46%)
Query: 14 YMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRLIFDHPYT 73
Y + +P+ + WS D + +GS+ ED NK+++++ N S S + D Y
Sbjct: 125 YQSHYPLFGLDWSA--D--DYVCLGSYKEDSRNKLQVLHSNDLLSWESVVDA---DVVYP 177
Query: 74 PTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAG 133
+ I + PS+ L P +AT DSLR+W + + + + +N + +++ + A
Sbjct: 178 VSKIQWVPSQ--LYPRKLATCSDSLRIWSVSPEERQFQEQINLS-LCKYNRQHPANPAAA 234
Query: 134 FDTRRVATCSVDTTCVIWD-IDREILETQLVAHDREVYDISWGGFNVFASVSGDCSVRVF 192
D + + T T W+ +D ++ + + V+D+ + ++ D V F
Sbjct: 235 DDMKVIGTFP-PITSFDWNTVDTNLIISSSIDTTCIVWDLQSSHYVKTQLIAHDSEV--F 291
Query: 193 DLRDKERSTIIY 204
D+R +ST ++
Sbjct: 292 DVRFLTKSTQLF 303
Score = 55 (24.4 bits), Expect = 6.2e-26, Sum P(3) = 6.2e-26
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 303 PELCYQSMA-EINVVRWSPLELDWIAIAFVNKLQLLKV 339
P + Y + EIN + W P DW K Q ++V
Sbjct: 485 PNMMYANKTQEINNIAWRPQRGDWFGCVSGKKFQNVRV 522
>UNIPROTKB|B4E039 [details] [associations]
symbol:DCAF7 "DDB1- and CUL4-associated factor 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AC113554
UniGene:Hs.410596 HGNC:HGNC:30915 EMBL:AK303212 IPI:IPI00908632
SMR:B4E039 STRING:B4E039 Ensembl:ENST00000415273 UCSC:uc010wpn.2
HOGENOM:HOG000200527 Uniprot:B4E039
Length = 142
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 55/151 (36%), Positives = 80/151 (52%)
Query: 194 LRDKERSTIIYENPVQDCPLLRLEWN-KADPRFMATVGMD----SNKVVVLDIRFPTNPV 248
L K + YE P + + W+ + D RF +G +NKVV+LD+R P PV
Sbjct: 3 LHGKRKEIYKYEAP---WTVYAMNWSVRPDKRFRLALGSFVEEYNNKVVILDVRVPCTPV 59
Query: 249 VVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCYQ 308
L+ H VNGI+WAP +C+ ADD +ALIW++ P +P L Y
Sbjct: 60 ARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDI--------QQMPRAIEDPILAYT 111
Query: 309 SMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
+ EIN V+W+ + DWIAI + N L++L+V
Sbjct: 112 AEGEINNVQWASTQPDWIAICYNNCLEILRV 142
Score = 123 (48.4 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 35/138 (25%), Positives = 66/138 (47%)
Query: 7 KKPGVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRL 66
K+ ++ Y A W + + WSVR D++ RLA+GSF+E+Y+NK+ +++ + + N
Sbjct: 6 KRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVVILDVRVPCTPVARLN-- 63
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSLR--LWEIHDDRTELKSLLNSNKTSEFSS 124
+H IA+ P + T+ D + +W+I ++ + + T+E
Sbjct: 64 --NHRACVNGIAWAPHSSCH----ICTAADDHQALIWDIQQMPRAIEDPILAY-TAE--G 114
Query: 125 AITSFDWAGFDTRRVATC 142
I + WA +A C
Sbjct: 115 EINNVQWASTQPDWIAIC 132
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 192 (72.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 60/201 (29%), Positives = 98/201 (48%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKT-SEFSSAITSFDWAGFDTRRVA--TCSVD 145
++A GD S+++++ T L N ++ E + + S D+ TRR + T S D
Sbjct: 76 LIAAIGDGSVKIYD-----TALPPPSNPIRSFQEHAREVQSVDYN--PTRRDSFLTSSWD 128
Query: 146 TTCVIWDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTII 203
T +W +DR H VY W + VFAS SGDC++R++D+R+ + II
Sbjct: 129 DTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMII 188
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P D +L +WNK D +AT +D V V D+R P+ VL+ H +V + +
Sbjct: 189 ---PAHDFEILSCDWNKYDDCILATSSVDKT-VKVWDVRSYRVPLAVLNGHGYAVRKVKF 244
Query: 264 APLYGRRLCSVADDSRALIWE 284
+P + S + D +W+
Sbjct: 245 SPHRRSLIASCSYDMSVCLWD 265
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 191 (72.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 60/220 (27%), Positives = 101/220 (45%)
Query: 131 WAGFDTRRVATCSVDTTCVIWDIDR----EILETQLV--AHDREVYDISWG--GFNVFAS 182
W+ F + + S D +WD+ ++L V H + D++W N+F S
Sbjct: 177 WSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGS 236
Query: 183 VSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR 242
DC + ++DLR + ++ V + + L +N + +AT DS V + D+R
Sbjct: 237 AGDDCQLVIWDLRTNQMQ---HQVKVHEREINYLSFNPFNEWVLATASSDST-VALFDLR 292
Query: 243 FPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGG-PSGDV 301
T P+ VLSKHEG V + W P + L S +D R ++W++ G + D
Sbjct: 293 KLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDG 352
Query: 302 EPELCYQS---MAEINVVRWSPLELDWI--AIAFVNKLQL 336
PEL + A+I+ W+ E W+ ++A N LQ+
Sbjct: 353 PPELLFSHGGHKAKISDFAWNKDE-PWVISSVAEDNSLQV 391
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 66/281 (23%), Positives = 122/281 (43%)
Query: 40 FLEDYSNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDS-L 98
FL DY+ ++ P+TS+ D RL+ H +A+ +E +++ S D +
Sbjct: 143 FLFDYAR----LSGKPQTSECDPDLRLM-GHEQEGYGLAWSSFKEGY---LLSGSQDQRI 194
Query: 99 RLWEIHDDRTELKSLLNSNKTSE-FSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREI 157
LW++ T+ +LN E S I W + + D VIWD+
Sbjct: 195 CLWDVSATATD--KVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQ 252
Query: 158 LETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLR 215
++ Q+ H+RE+ +S+ FN V A+ S D +V +FDLR + + ++ + + +
Sbjct: 253 MQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLR--KLTAPLHVLSKHEGEVFQ 310
Query: 216 LEWNKADPRFMATVGMDSNKVV---------VLDIRFPTN---PVVVLSK--HEGSVNGI 261
+EW+ +A+ G D +V L+I P ++ S H+ ++
Sbjct: 311 VEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDF 370
Query: 262 SWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVE 302
+W + SVA+D+ +W++ YR + D E
Sbjct: 371 AWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDDDE 411
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 183 (69.5 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 60/209 (28%), Positives = 98/209 (46%)
Query: 82 SEETLNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKT-SEFSSAITSFDWAGFDTRRV 139
SEE + ++SGD S+++W+ T+ S K+ E + + S DW
Sbjct: 67 SEEN-ECHVASSSGDGSIKIWD-----TQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTF 120
Query: 140 ATCSVDTTCVIWD--IDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLR 195
T S D + IW+ +DR L+T H +Y W N +FASVSGD +++++D R
Sbjct: 121 ITGSWDQSIKIWNPRMDRS-LKT-FREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSR 178
Query: 196 DKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHE 255
D I D +L +WNK + + + T +D + + DIR+P P +L H
Sbjct: 179 DNRSLNTI---KAHDHEILTCDWNKYNDKEVVTGSVDKT-IRIWDIRYPDRPTTILRGHT 234
Query: 256 GSVNGISWAPLYGRRLCSVADDSRALIWE 284
+V I +P L S + D ++W+
Sbjct: 235 YAVRRIKCSPHSESMLASCSYDMSVIVWD 263
Score = 159 (61.0 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 52/204 (25%), Positives = 90/204 (44%)
Query: 90 IVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCV 149
I + S+++W DR+ LK+ E I S W+ + A+ S D T
Sbjct: 121 ITGSWDQSIKIWNPRMDRS-LKTF------REHRYCIYSAIWSPRNAHLFASVSGDRTLK 173
Query: 150 IWDI-DREILETQLVAHDREVYDISWGGFNVFASVSG--DCSVRVFDLRDKERSTIIYEN 206
IWD D L T + AHD E+ W +N V+G D ++R++D+R +R T I
Sbjct: 174 IWDSRDNRSLNT-IKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRG 232
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVV-LSKHEGSVNGISWAP 265
+ R++ + +A+ D + V+V D +P++ + H V G+ W
Sbjct: 233 HTY--AVRRIKCSPHSESMLASCSYDMS-VIVWDRAREQDPIIARMDHHTEFVVGLDWNM 289
Query: 266 LYGRRLCSVADDSRALIWEVVGPG 289
++ S + D + +W + PG
Sbjct: 290 FIDGQMASCSWDEQVCVWNLGRPG 313
>CGD|CAL0004918 [details] [associations]
symbol:orf19.384 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004918 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AACQ01000177 EMBL:AACQ01000176 eggNOG:NOG314410 KO:K11805
RefSeq:XP_711872.1 RefSeq:XP_711901.1 ProteinModelPortal:Q59QD4
STRING:Q59QD4 GeneID:3646465 GeneID:3646504 KEGG:cal:CaO19.384
KEGG:cal:CaO19.8014 Uniprot:Q59QD4
Length = 558
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 74/302 (24%), Positives = 130/302 (43%)
Query: 54 NPETSDFSADNRLIFD-HPYTPTNIAFFPSEETLNPDIVATSG-DSLRL-WEIHDDRTEL 110
N S S+ R I D + + P + F +T +P+++ TS D+ + W++H R+
Sbjct: 272 NSNNSSGSSSARTIEDVNTFPP--VTSFDWNKT-DPNVLITSSVDTTCIVWDLH--RSPG 326
Query: 111 KSLLNSNK--TSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDRE 168
++ +N T+ + + + D FD + + + V D + + + + H
Sbjct: 327 RTAINEEMLDTATVKTQLIAHDSEVFDVKFLHKSTNVFASVGNDGSMRVFDLRSLEHSTI 386
Query: 169 VYDISWGGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMAT 228
+Y+ S AS S S + + + LL L + D +A
Sbjct: 387 IYEPSPS-----ASSSATASASASTSAANHSLSATFNSKA----LLTLSTSNVDQHHLAA 437
Query: 229 VGMDSNKVVVLDIRFPTNPVVVLSKHEG-----SVNGISWAPLYGRRLCSVADDSRALIW 283
VG++SN+++++D+R P PVV++ G S+N I W P L S DD +AL+W
Sbjct: 438 VGVNSNQIIIIDMRMPGLPVVIIDASLGGMNNSSINSIKWHPT-SNYLLSGGDDCQALVW 496
Query: 284 EVVGPGYR---SGNGGP-SGDV--EPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLL 337
++ S NG SG + P L Y EIN V W + DW+ + Q +
Sbjct: 497 DINNLSNATNGSTNGSNHSGRIIDTPVLAYSEDLEINNVCWRQNQGDWMGVVSGKGFQAV 556
Query: 338 KV 339
+
Sbjct: 557 SI 558
>UNIPROTKB|Q59QD4 [details] [associations]
symbol:CaO19.384 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004918 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AACQ01000177
EMBL:AACQ01000176 eggNOG:NOG314410 KO:K11805 RefSeq:XP_711872.1
RefSeq:XP_711901.1 ProteinModelPortal:Q59QD4 STRING:Q59QD4
GeneID:3646465 GeneID:3646504 KEGG:cal:CaO19.384
KEGG:cal:CaO19.8014 Uniprot:Q59QD4
Length = 558
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 74/302 (24%), Positives = 130/302 (43%)
Query: 54 NPETSDFSADNRLIFD-HPYTPTNIAFFPSEETLNPDIVATSG-DSLRL-WEIHDDRTEL 110
N S S+ R I D + + P + F +T +P+++ TS D+ + W++H R+
Sbjct: 272 NSNNSSGSSSARTIEDVNTFPP--VTSFDWNKT-DPNVLITSSVDTTCIVWDLH--RSPG 326
Query: 111 KSLLNSNK--TSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDRE 168
++ +N T+ + + + D FD + + + V D + + + + H
Sbjct: 327 RTAINEEMLDTATVKTQLIAHDSEVFDVKFLHKSTNVFASVGNDGSMRVFDLRSLEHSTI 386
Query: 169 VYDISWGGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMAT 228
+Y+ S AS S S + + + LL L + D +A
Sbjct: 387 IYEPSPS-----ASSSATASASASTSAANHSLSATFNSKA----LLTLSTSNVDQHHLAA 437
Query: 229 VGMDSNKVVVLDIRFPTNPVVVLSKHEG-----SVNGISWAPLYGRRLCSVADDSRALIW 283
VG++SN+++++D+R P PVV++ G S+N I W P L S DD +AL+W
Sbjct: 438 VGVNSNQIIIIDMRMPGLPVVIIDASLGGMNNSSINSIKWHPT-SNYLLSGGDDCQALVW 496
Query: 284 EVVGPGYR---SGNGGP-SGDV--EPELCYQSMAEINVVRWSPLELDWIAIAFVNKLQLL 337
++ S NG SG + P L Y EIN V W + DW+ + Q +
Sbjct: 497 DINNLSNATNGSTNGSNHSGRIIDTPVLAYSEDLEINNVCWRQNQGDWMGVVSGKGFQAV 556
Query: 338 KV 339
+
Sbjct: 557 SI 558
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 175 (66.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 71/245 (28%), Positives = 111/245 (45%)
Query: 56 ETSDF-SADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDSL-RLWEI--------HD 105
+TS ++D R++ H A+ PS L + SGD+ R+W I H
Sbjct: 249 QTSHIPNSDVRILEGHTSEVCACAWSPSASLL----ASGSGDATARIWSIPEGSFKAVHT 304
Query: 106 DRTELKSLLN--SNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLV 163
R +L K++E S +T+ DW G T +AT S D IW ++ E++ T L
Sbjct: 305 GRNINALILKHAKGKSNEKSKDVTTLDWNGEGTL-LATGSCDGQARIWTLNGELIST-LS 362
Query: 164 AHDREVYDISW---GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNK 220
H ++ + W G + + SV D + V+D++ +E +E P L ++W
Sbjct: 363 KHKGPIFSLKWNKKGDYLLTGSV--DRTAVVWDVKAEEWKQQ-FE--FHSGPTLDVDWRN 417
Query: 221 ADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRA 280
+ F AT DS ++ L T P + H+G VN + W P G L S +DDS A
Sbjct: 418 -NVSF-ATSSTDS--MIYLCKIGETRPAKTFTGHQGEVNCVKWDPT-GSLLASCSDDSTA 472
Query: 281 LIWEV 285
IW +
Sbjct: 473 KIWNI 477
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 170 (64.9 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 79/313 (25%), Positives = 128/313 (40%)
Query: 42 EDYSNKIELVNFNPETSDFSADNRLIF-DHPYTPTNIAFFPSEETLNPDIVATSGD--SL 98
ED + E + + E D + +L F +H I + +IVAT D S+
Sbjct: 163 EDSDDDEESDDEDDEDKDVDPELQLAFINHNGAVNRIRSMDQQS----NIVATWSDNRSV 218
Query: 99 RLWEI--H----DDRTEL-KSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIW 151
+W I H D+ T K + S S + DW+ R+AT + + +
Sbjct: 219 YIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVT 278
Query: 152 DIDREILETQLVA---HDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYEN 206
+ +T A H V DI W VFAS S D +VR++D+R K + I +
Sbjct: 279 NASESTWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIR-KPKPAITVKA 337
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPTN-PVVVLSKHEGSVNGISWA 264
D ++ W++ + ++ G D V D+R F N PV H G + I W
Sbjct: 338 HTADVNVI--SWSR-NVEYLLVSGCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWN 394
Query: 265 PLYGRRLCSVADDSRALIW----EVVGPGYRSGNGGPSGDVE--PELCY--QSMAEINVV 316
P ++ + D + IW E + + N P D + P+L + Q +I V
Sbjct: 395 PYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPDDDFQYPPQLFFIHQGQHDIKEV 454
Query: 317 RWSPLELDWIAIA 329
W P ++ +AI+
Sbjct: 455 HWHP-QIPHVAIS 466
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 56/220 (25%), Positives = 98/220 (44%)
Query: 131 WAGFDTRRVATCSVDTTCVIWDIDR----EILETQLV--AHDREVYDISWG--GFNVFAS 182
W+ F + + S D +WD+ ++L V H+ + D+SW N+F S
Sbjct: 176 WSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGS 235
Query: 183 VSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR 242
D + ++D R + ++ V + + L +N + +AT DS V + D+R
Sbjct: 236 AGEDGRLVIWDTRTNQMQ---HQVKVHEREVNYLSFNPFNEWVLATASSDST-VALFDLR 291
Query: 243 FPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGG-PSGDV 301
P+ V+S HEG V + W P + L S +D R ++W++ G + D
Sbjct: 292 KLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDG 351
Query: 302 EPELCYQS---MAEINVVRWSPLELDWI--AIAFVNKLQL 336
PEL + A+I+ W+ E W+ ++A N LQ+
Sbjct: 352 PPELLFSHGGHKAKISDFAWNKNE-PWVIASVAEDNSLQV 390
Score = 161 (61.7 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 68/288 (23%), Positives = 122/288 (42%)
Query: 40 FLEDYSNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDS-L 98
FL DY+ +TS+ D RL+ H +++ P +E +++ S D +
Sbjct: 142 FLFDYAKHAA----KSQTSECDPDLRLV-GHDKEGYGLSWSPFKEGY---LLSGSQDQKI 193
Query: 99 RLWEIHDDRTELKSLLNSNKTSE-FSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREI 157
LW++ T +LN+ E SAI W + + D VIWD
Sbjct: 194 CLWDV--SATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQ 251
Query: 158 LETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLR 215
++ Q+ H+REV +S+ FN V A+ S D +V +FDLR + + + + +
Sbjct: 252 MQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSS--HEGEVFQ 309
Query: 216 LEWNKADPRFMATVGMDSNKVV---------VLDIRFPTN---PVVVLSK--HEGSVNGI 261
+EW+ +A+ G D +V L+I P ++ S H+ ++
Sbjct: 310 VEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDF 369
Query: 262 SWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCYQS 309
+W + SVA+D+ +W++ YR D++ ++ QS
Sbjct: 370 AWNKNEPWVIASVAEDNSLQVWQMAESIYRDEEDAE--DIKEDITQQS 415
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 161 (61.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRR-VATCSVDTT 147
++ +SGD SL++W+I + K L K E + S DW+ + V + S D T
Sbjct: 81 LITSSGDGSLQIWDI----AKPKGPLQVYK--EHTQEAYSVDWSQTRGEQLVVSGSWDQT 134
Query: 148 CVIWD-IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTIIY 204
+WD + L T H+ +Y W FAS SGD ++R++D++ +I
Sbjct: 135 AKLWDPAVGKSLRT-FKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLVI- 192
Query: 205 ENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWA 264
P +L +W K D + T +D + + D+R PV +L H +V + ++
Sbjct: 193 --PAHQAEILSCDWCKYDENLLVTGAVDCS-LKGWDLRNVRQPVFILLGHTYAVRRVKFS 249
Query: 265 PLYGRRLCSVADDSRALIWEVVGP 288
P + L S + D W+ P
Sbjct: 250 PFHATLLASCSYDFTVRFWDFSKP 273
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 163 (62.4 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 62/251 (24%), Positives = 103/251 (41%)
Query: 41 LEDYSNKIELVNFNPETSDFSADNRLIFDHPYTPT-NIAFFPSEETLNPDIVATSGDSLR 99
L Y +E +NF+P D S N + + TP + ++L P V T G L
Sbjct: 183 LSAYPLSVEWLNFDPSPDD-STGNYIAVGN-MTPVIEVWDLDIVDSLEP--VFTLGSKL- 237
Query: 100 LWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILE 159
+ + K NS+ + A+ W +A+ S D T ++WD+
Sbjct: 238 -----SKKKKKKGKKNSSADGH-TDAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPA 291
Query: 160 TQLVAHDREVYDISWGGFNVFASVSG--DCSVRVFDLRDKERSTIIYENPVQDCPLLRLE 217
L H +V + + F +SG D SV ++D R E S ++ Q + R+
Sbjct: 292 ASLAVHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRSPEESHRMWRFSGQ---IERVT 348
Query: 218 WNKADP-RFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVAD 276
WN P F+A+ D V LD R P+ L+ H ++G+ + L + +
Sbjct: 349 WNHFSPCHFLAST--DDGFVYNLDAR-SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASA 405
Query: 277 DSRALIWEVVG 287
D IW+++G
Sbjct: 406 DKYVKIWDILG 416
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 163 (62.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 69/298 (23%), Positives = 129/298 (43%)
Query: 10 GVHTYMAQWPISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDF----SADNR 65
G + A + + W V D K L LE + N + V+++P+ + +A+
Sbjct: 236 GKYLATASSDCTAIIWKVLDDNKVELK--HTLESHQNPVSFVSWSPDDTKLLTCGNAEVL 293
Query: 66 LIFD-------HPYTPTNIAFFPSEETLNPD---IVATSGDSLR---LWEIHDDRTELKS 112
++D H + N F S PD +V S D R +W+ D E+K+
Sbjct: 294 KLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDT--DGNEIKA 351
Query: 113 LLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDI 172
+ A+T D + T D I +++ ++ ++++ ++ + +
Sbjct: 352 WRGTRIPKVVDLAVTP------DGESMITVFSDKEIRILNLETKV--ERVISEEQPITSL 403
Query: 173 SWGGFNVFASVSGDCS-VRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
S G F V+ C + ++DL + + + + Q ++R + D F+A+ G
Sbjct: 404 SISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIAS-GS 462
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPG 289
+ ++V + +++ T P+ VLS H +VN +SW P R L S +DD IW GPG
Sbjct: 463 EDSQVYIWNLK-NTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW---GPG 516
>MGI|MGI:1914735 [details] [associations]
symbol:Pwp1 "PWP1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1914735 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:11137
GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:AK009972 EMBL:AK082158 EMBL:BC003199 EMBL:BC023137
IPI:IPI00320422 RefSeq:NP_598754.2 UniGene:Mm.18834
ProteinModelPortal:Q99LL5 SMR:Q99LL5 IntAct:Q99LL5 STRING:Q99LL5
PhosphoSite:Q99LL5 PaxDb:Q99LL5 PRIDE:Q99LL5
Ensembl:ENSMUST00000001836 GeneID:103136 KEGG:mmu:103136
UCSC:uc007gnc.2 InParanoid:Q99LL5 NextBio:355805 Bgee:Q99LL5
CleanEx:MM_PWP1 Genevestigator:Q99LL5 GermOnline:ENSMUSG00000001785
Uniprot:Q99LL5
Length = 501
Score = 160 (61.4 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 62/251 (24%), Positives = 106/251 (42%)
Query: 41 LEDYSNKIELVNFNPETSDFSADNRLIFDHPYTPT-NIAFFPSEETLNPDIVATSGDSLR 99
L Y +E +NF+P + D S N + + TP + ++L P V T G L
Sbjct: 183 LSAYPLSVEWLNFDP-SPDASTGNYIAVGN-MTPVIEVWDLDIVDSLEP--VFTLGSKL- 237
Query: 100 LWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILE 159
+ + K S+ + A+ W +A+ S D+T V+WD+
Sbjct: 238 ------SKKKKKKGKKSSSAEGHTDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSV 291
Query: 160 TQLVAHDREVYDISWGGFNVFASVSG--DCSVRVFDLRDKERSTIIYENPVQDCPLLRLE 217
+L AH +V + + F +SG D SV ++D RD ++ + Q + R+
Sbjct: 292 ARLTAHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRDPSQNHRQWRFSGQ---IERVT 348
Query: 218 WNKADP-RFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVAD 276
WN P F+A+ D V LD R P+ L+ H ++G+ + L + +
Sbjct: 349 WNHFSPCHFLAST--DDGFVYNLDAR-SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASA 405
Query: 277 DSRALIWEVVG 287
D IW+++G
Sbjct: 406 DKFVKIWDILG 416
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 60/251 (23%), Positives = 102/251 (40%)
Query: 41 LEDYSNKIELVNFNPETSDFSADNRLIFDHPYTPT-NIAFFPSEETLNPDIVATSGDSLR 99
L Y +E +NF+P D S N + + TP + ++L P V T G L
Sbjct: 184 LSAYPLSVEWLNFDPSPDD-STGNYIAVGN-MTPVIEVWDLDIVDSLEP--VFTLGSKL- 238
Query: 100 LWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILE 159
+ + K S+ + A+ W +A+ S D T ++WD+
Sbjct: 239 ------SKKKKKKGKKSSSAEGHTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPA 292
Query: 160 TQLVAHDREVYDISWGGFNVFASVSG--DCSVRVFDLRDKERSTIIYENPVQDCPLLRLE 217
L H +V + + F +SG D SV ++D R + S ++ Q + R+
Sbjct: 293 ASLAVHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRSPDESHRMWRFSGQ---IERVT 349
Query: 218 WNKADP-RFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVAD 276
WN P F+A+ D V LD R P+ L+ H ++G+ + L + +
Sbjct: 350 WNHFSPCHFLAST--DDGFVYNLDAR-SDKPIFTLNAHNDEISGLDLSSQIKGCLVTASA 406
Query: 277 DSRALIWEVVG 287
D IW+++G
Sbjct: 407 DKYVKIWDILG 417
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 152 (58.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 52/205 (25%), Positives = 88/205 (42%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGF-DTRRVATCSVDTT 147
+V SGD SL+LW D + L K E + + S DW+ D + V + S D T
Sbjct: 78 LVTCSGDGSLQLW----DTAKATGPLQVYK--EHTQEVYSVDWSQTRDEQLVVSGSWDQT 131
Query: 148 CVIWD--IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTII 203
+WD + + + H+ +Y W FAS SGD ++R++D++ +I
Sbjct: 132 VKVWDPTVGNSLCTFR--GHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVI 189
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P +L +W K + + T +D + + D+R PV L H ++ + +
Sbjct: 190 ---PAHQAEILSCDWCKYNENLLVTGAVDCS-LRGWDLRNVRQPVFELLGHTYAIRRVKF 245
Query: 264 APLYGRRLCSVADDSRALIWEVVGP 288
+P + L S + D W P
Sbjct: 246 SPFHASVLASCSYDFTVRFWNFSKP 270
>DICTYBASE|DDB_G0276797 [details] [associations]
symbol:lysA "peptidoglycan-binding LysM
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002482 InterPro:IPR015943 InterPro:IPR018392
Pfam:PF00400 Pfam:PF01476 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00257 SMART:SM00320 dictyBase:DDB_G0276797
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 GO:GO:0016998 InterPro:IPR006571 Pfam:PF07534
SMART:SM00584 RefSeq:XP_642883.1 ProteinModelPortal:Q7KWK0
EnsemblProtists:DDB0185074 GeneID:8620749 KEGG:ddi:DDB_G0276797
InParanoid:Q7KWK0 OMA:HIRHITS Uniprot:Q7KWK0
Length = 1405
Score = 159 (61.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 40/155 (25%), Positives = 78/155 (50%)
Query: 139 VATCSVDTTCVIWDI-DREILETQLVAHDREVYDISWGG--FNVFASVSGDCSVRVFDLR 195
V++ D + +W++ D +++ +H R + +SW N+ AS S DC +FD+R
Sbjct: 133 VSSSLKDYSIYLWNVRDEKLIVKFSKSHIRHITSLSWNTQETNLIASASSDCMANIFDIR 192
Query: 196 DKER-STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKH 254
++ + S I N L ++ WN +AT ++++ + DIR +P+ +S H
Sbjct: 193 ERTQGSGGISTNFKARSNLSQIAWNPNSSTMLAT--SNASEFNIWDIRKFGSPLSCVSAH 250
Query: 255 EGSVNGISWAPLYGRRLCSVADDSRAL-IWEVVGP 288
GS++ I W+P +L + + + +W+V P
Sbjct: 251 IGSISNIEWSPKERNQLLTCGPTEKCVKVWDVTPP 285
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 149 (57.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 52/205 (25%), Positives = 87/205 (42%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRR-VATCSVDTT 147
+V SGD SL+LW D L K E + + S DW+ + V + S D T
Sbjct: 83 LVTCSGDGSLQLW----DTAGAAGPLQVYK--EHTQEVYSVDWSQTRGEQLVVSGSWDQT 136
Query: 148 CVIWD--IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTII 203
+WD + R + + H+ +Y W FAS SGD ++R++D++ ++
Sbjct: 137 VKLWDPTVGRSLCTFK--GHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVV 194
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P +L +W K + + T +D + + D+R PV L H ++ + +
Sbjct: 195 ---PAHQAEILSCDWCKYNENLLVTGAVDCS-LRGWDLRNVRQPVFELLGHTYAIRRVKF 250
Query: 264 APLYGRRLCSVADDSRALIWEVVGP 288
+P Y L S + D W P
Sbjct: 251 SPFYASVLASCSYDFTVRFWNFSKP 275
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 152 (58.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 57/243 (23%), Positives = 104/243 (42%)
Query: 98 LRLWEIHDDRTELKSLLNSNK--TSEFSSA--IT---SFDWAGFDTRRVATCSVDTTCVI 150
L+L +H+ T + + + K T FS A ++ + DW+ R+ + +
Sbjct: 194 LQLEAVHNS-TAMSAFIKQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHV 252
Query: 151 WDIDR----EILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIY 204
W+ +I + +H + V D+ W VFAS S D S+R++D+R S ++
Sbjct: 253 WEPQEGGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNS-MLS 311
Query: 205 ENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPTN-PVVVLSKHEGSVNGIS 262
N + + WN+ +P ++ G D + V D+R F + PV +H V +
Sbjct: 312 ANEAHSSDVNVISWNRTEPFILS--GGDDGLLKVWDLRQFQSGRPVASFKQHSAPVTSVQ 369
Query: 263 WAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVE---PELCY--QSMAEINVVR 317
W+P+ + D W++ GG + DV+ P+L + Q E+ +
Sbjct: 370 WSPVDSSVFAASGADDVISQWDLSVES--CDMGGQAEDVKQLPPQLLFLHQGQKEVKELH 427
Query: 318 WSP 320
W P
Sbjct: 428 WHP 430
Score = 125 (49.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 39/146 (26%), Positives = 62/146 (42%)
Query: 94 SGD---SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVI 150
SGD ++ +WE + T K ++ S S ++ W+ + A+CSVD + I
Sbjct: 243 SGDCKKNIHVWEPQEGGT-WK--IDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRI 299
Query: 151 WDI---DREILETQLVAHDREVYDISWGGFNVFASVSGDCSV-RVFDLRDKERSTIIYEN 206
WDI +L AH +V ISW F GD + +V+DLR + +
Sbjct: 300 WDIRAPPNSMLSAN-EAHSSDVNVISWNRTEPFILSGGDDGLLKVWDLRQFQSGRPVASF 358
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMD 232
P+ ++W+ D A G D
Sbjct: 359 KQHSAPVTSVQWSPVDSSVFAASGAD 384
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 149 (57.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 59/219 (26%), Positives = 98/219 (44%)
Query: 89 DIVATSGD--SLRLW-EIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVD 145
+++AT G+ ++R+W E R K++L+ S I W+ + +A+ S D
Sbjct: 27 NVLATCGEDKTIRIWAEDASQRWVAKTVLSDGH----SRTIRDVAWSPCG-QYLASASFD 81
Query: 146 TTCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDL--RDKERS 200
T IWD E L H+ EV +SW ++ A+ S D SV V+++ D+
Sbjct: 82 ATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYEC 141
Query: 201 TIIYENPVQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLDIRFPT-NPVVVLSKHEGSV 258
+ QD + ++EW+ + +A+ D+ K+ D+ + L HE +V
Sbjct: 142 AAVLNTHTQD--VKKVEWHPHED-ILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTV 198
Query: 259 NGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
IS+ G RL S +DD IW+ PG G P
Sbjct: 199 WSISFDGS-GNRLASCSDDQTVKIWQEYKPGNEFGVSCP 236
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/206 (25%), Positives = 89/206 (43%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTC 148
+ + GD ++R+W D E K++L A+ W+ +A+ S D T
Sbjct: 31 LASCGGDRAIRIWGREGDSWECKTVLQDGH----QRAVRKVAWSPCGNY-LASASFDATT 85
Query: 149 VIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDL--RDKERSTII 203
IW + E T L H+ EV ++W N A+ S D SV ++++ D+ +
Sbjct: 86 CIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSV 145
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
+ QD + + W+ +A+ D+N V + L H +V G+++
Sbjct: 146 VNSHTQD--VKHVVWHPTQ-ELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF 202
Query: 264 APLYGRRLCSVADDSRALIWEVVGPG 289
P G+RL S +DD IW+ PG
Sbjct: 203 DPS-GQRLASCSDDRTVKIWKECQPG 227
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 146 (56.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/205 (24%), Positives = 88/205 (42%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRR-VATCSVDTT 147
+V SGD SL+LW D + L K E + + S DW+ + V + S D T
Sbjct: 83 LVTCSGDGSLQLW----DTAKATGPLQVYK--EHTQEVYSVDWSQTRGEQLVVSGSWDQT 136
Query: 148 CVIWD--IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTII 203
+WD + + + + H+ +Y W FAS SGD ++R++D++ ++
Sbjct: 137 VKLWDPTVGKSLCTFR--GHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVRIVV 194
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P +L +W K + + T +D + + D+R PV L H ++ + +
Sbjct: 195 ---PAHQAEILSCDWCKYNENLLVTGAVDCS-LRGWDLRNVRQPVFELLGHTYAIRRVKF 250
Query: 264 APLYGRRLCSVADDSRALIWEVVGP 288
+P + L S + D W P
Sbjct: 251 SPFHASVLASCSYDFTVRFWNFSKP 275
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/229 (24%), Positives = 95/229 (41%)
Query: 71 PYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSF 129
P P + +F + + + GD +R+W D KS+L+ +
Sbjct: 12 PAHPDSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGH----QRTVRKV 67
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGD 186
W+ +A+ S D T IW +++ E T L H+ EV ++W N+ A+ S D
Sbjct: 68 AWSPCGNY-LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 187 CSVRVFDL--RDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFP 244
SV V+++ D+ + + QD + + W+ + +A+ D + +
Sbjct: 127 KSVWVWEVDEEDEYECVSVLNSHTQD--VKHVVWHPSQ-ELLASASYDDTVKLYQEEGDD 183
Query: 245 TNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSG 293
L HE +V I++ P G+RL S +DD IW PG G
Sbjct: 184 WVCCATLEGHESTVWSIAFDPS-GQRLASCSDDRTVRIWRQYLPGNEQG 231
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 56/218 (25%), Positives = 96/218 (44%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W ++ + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRIWSLNGNTWTTKTILSDGH----KRTIREIRWSPCG-QYLASASFDG 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR-DKERSTI 202
T IW E L H+ EV +SW + A+ S D SV ++++ D E
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 203 IYENP-VQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLD-IRFPTNPVVVLSKHEGSVN 259
NP QD + R+ W+ +A+ D+ K+ D + + V LS H +V
Sbjct: 142 AVLNPHTQD--VKRVVWHPTK-ELLASASYDNTIKMFAEDALDSDWDCVATLSSHTSTVW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
I + G RL S +DD+ IW+ PG +G P
Sbjct: 199 SIDFDAT-GERLVSCSDDTSLKIWQAYHPGNDAGVATP 235
Score = 89 (36.4 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 51/181 (28%), Positives = 75/181 (41%)
Query: 54 NPETSD-----FSADNRLIFDHPYTPTNIAFFPSEETLNPD--IVAT-SGDSLRLWEIHD 105
NP T D + L+ Y T I F +E+ L+ D VAT S + +W I
Sbjct: 145 NPHTQDVKRVVWHPTKELLASASYDNT-IKMF-AEDALDSDWDCVATLSSHTSTVWSIDF 202
Query: 106 DRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAH 165
D T + + S+ TS I G D VAT T +W + + T H
Sbjct: 203 DATGERLVSCSDDTS---LKIWQAYHPGNDAG-VATPDKQT---VW----KCVCTISGQH 251
Query: 166 DREVYDISWGGF-NVFASVSGDCSVRVF-DLRDKERSTIIYEN-----PVQDCPLLRLEW 218
R +YD+SW N+ A+ GD +R+F + D +R +E D + +EW
Sbjct: 252 SRAIYDVSWCKLTNLIATACGDDGIRIFKETSDSKRDEPTFEQLTAEEGAHDQDVNSVEW 311
Query: 219 N 219
N
Sbjct: 312 N 312
Score = 65 (27.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
H+ VN + W P+ +L S +DD +W++
Sbjct: 302 HDQDVNSVEWNPVVEGQLISCSDDGTIKVWKM 333
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 54/229 (23%), Positives = 95/229 (41%)
Query: 71 PYTPTNIAFFPSEETLNPDIVATSGDS-LRLWEIHDDRTELKSLLNSNKTSEFSSAITSF 129
P P + +F + + + GD +R+W D KS+L+ +
Sbjct: 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGH----QRTVRKV 67
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGD 186
W+ +A+ S D T IW +++ E T L H+ EV ++W N+ A+ S D
Sbjct: 68 AWSPCGNY-LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 187 CSVRVFDL--RDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFP 244
SV V+++ D+ + + QD + + W+ + +A+ D + +
Sbjct: 127 KSVWVWEVDEEDEYECVSVLNSHTQD--VKHVVWHPSQ-ELLASASYDDTVKLYREEEDD 183
Query: 245 TNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSG 293
L HE +V +++ P G+RL S +DD IW PG G
Sbjct: 184 WVCCATLEGHESTVWSLAFDPS-GQRLASCSDDRTVRIWRQYLPGNEQG 231
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 55/229 (24%), Positives = 95/229 (41%)
Query: 71 PYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSF 129
P P + +F + + + GD +R+W D KS+L+ +
Sbjct: 12 PAHPDSRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGH----QRTVRKV 67
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGD 186
W+ +A+ S D T IW +++ E T L H+ EV ++W N+ A+ S D
Sbjct: 68 AWSPCGNY-LASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 187 CSVRVFDL--RDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFP 244
SV V+++ D+ + + QD + + W+ + +A+ D + +
Sbjct: 127 KSVWVWEVDEEDEYECVSVLSSHTQD--VKHVVWHPSQ-ELLASASYDDTVKLYQEEGDD 183
Query: 245 TNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSG 293
L HE +V I++ P G+RL S +DD IW PG G
Sbjct: 184 WVCCATLEGHESTVWSIAFDPS-GQRLASCSDDRTVRIWRQYLPGNEQG 231
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 143 (55.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 51/205 (24%), Positives = 87/205 (42%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRR-VATCSVDTT 147
+V SGD SL+LW D + L K E + + S DW+ + V + S D T
Sbjct: 78 LVTCSGDGSLQLW----DTAKATGPLQVYK--EHTQEVYSVDWSQTRGEQLVVSGSWDQT 131
Query: 148 CVIWD--IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTII 203
+WD + + + H+ +Y W FAS SGD ++R++D++ +I
Sbjct: 132 VKVWDPTVGNSLCTFR--GHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTAGVRIVI 189
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P +L +W K + + T +D + + D+R PV L H ++ + +
Sbjct: 190 ---PAHQTEILSCDWCKYNENLVVTGAVDCS-LRGWDLRNVRQPVFELLGHTYAIRRVKF 245
Query: 264 APLYGRRLCSVADDSRALIWEVVGP 288
+P + L S + D W P
Sbjct: 246 SPFHASVLASCSYDFTVRFWNFSKP 270
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 143 (55.4 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 51/205 (24%), Positives = 87/205 (42%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRR-VATCSVDTT 147
+V SGD SL+LW D + L K E + + S DW+ + V + S D T
Sbjct: 78 LVTCSGDGSLQLW----DTAKATGPLQVYK--EHTQEVYSVDWSQTRGEQLVVSGSWDQT 131
Query: 148 CVIWD--IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTII 203
+WD + + + H+ +Y W FAS SGD ++R++D++ +I
Sbjct: 132 VKVWDPTVGNSLCTFR--GHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVI 189
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P +L +W K + + T +D + + D+R PV L H ++ + +
Sbjct: 190 ---PAHQTEILSCDWCKYNENLVVTGAVDCS-LRGWDLRNVRQPVFELLGHTYAIRRVKF 245
Query: 264 APLYGRRLCSVADDSRALIWEVVGP 288
+P + L S + D W P
Sbjct: 246 SPFHASVLASCSYDFTVRFWNFSKP 270
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 50/205 (24%), Positives = 88/205 (42%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRR-VATCSVDTT 147
++ SGD SL+LW D + L K E + + S DW+ + V + S D T
Sbjct: 83 LITCSGDGSLQLW----DTAKAAGPLQVYK--EHAQEVYSVDWSQTRGEQLVVSGSWDQT 136
Query: 148 CVIWD--IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTII 203
+WD + + + + H+ +Y W FAS SGD ++R++D++ +I
Sbjct: 137 VKLWDPTVGKSLCTFR--GHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIVI 194
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P +L +W K + + T +D + + D+R PV L H ++ + +
Sbjct: 195 ---PAHQAEILSCDWCKYNENLLVTGAVDCS-LRGWDLRNVRQPVFELLGHTYAIRRVKF 250
Query: 264 APLYGRRLCSVADDSRALIWEVVGP 288
+P + L S + D W P
Sbjct: 251 SPFHASVLASCSYDFTVRFWNFSKP 275
>ZFIN|ZDB-GENE-040426-1417 [details] [associations]
symbol:wdr77 "WD repeat domain 77" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1417
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:79084 HOVERGEN:HBG052458 KO:K13221
EMBL:BC056278 EMBL:BC066433 IPI:IPI00493407 RefSeq:NP_956828.1
UniGene:Dr.24325 GeneID:393506 KEGG:dre:393506 NextBio:20814532
Uniprot:Q7SZR9
Length = 319
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 46/193 (23%), Positives = 90/193 (46%)
Query: 90 IVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCV 149
++A+ S+ LW++ +D + L+N E +T A R +CS D
Sbjct: 85 LLASDSGSVELWDLAEDE---RLLVNRFSRQEHGDVVTGVS-ACVGGRTAVSCSADCRIK 140
Query: 150 IWDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLR-DKERSTIIYEN 206
+WD+++E + AH + V +S + +F S + D + ++D R DK + I ++
Sbjct: 141 VWDLNQETVINSYNAHSQPVSGVSCSPVDEFLFLSCAQDGRLLLWDQRKDKPATRIDVQS 200
Query: 207 PVQDCPLLRLEWNKADPRFMATV--GMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWA 264
P C + W+ P+ +T+ G + +V V D++ ++ V H VN ++++
Sbjct: 201 P--SCSPTAVVWH---PQHSSTIAYGDELGRVTVKDLK-ASDGVKTTHTHRRRVNRLAYS 254
Query: 265 PLYGRRLCSVADD 277
L S++DD
Sbjct: 255 DDSAALLASISDD 267
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 143 (55.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 63/268 (23%), Positives = 110/268 (41%)
Query: 87 NPDIVATSGDSLRLWEI----HDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVAT 141
NP I+AT + ++ H + L N + K SS W+ F + +
Sbjct: 137 NPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYGLSWSKFKQGHLLS 196
Query: 142 CSVDTTCVIWDID----REILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFD 193
S D +WDI+ + L+ Q + AH+ V D++W + +F SV D + ++D
Sbjct: 197 GSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256
Query: 194 LRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSK 253
LR S + + L +N + +AT G V + D+R + +
Sbjct: 257 LRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVAT-GSTDKTVKLFDLRKLSTALHTFDS 315
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSM 310
H+ V + W P L S R ++W++ + D PEL +
Sbjct: 316 HKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQ-TVEDAEDGPPELLFIHGGHT 374
Query: 311 AEINVVRWSPLELDWI--AIAFVNKLQL 336
++I+ W+P E DW+ ++A N LQ+
Sbjct: 375 SKISDFSWNPCE-DWVISSVAEDNILQI 401
Score = 41 (19.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ +WP TV W
Sbjct: 35 VITHALEWPSLTVEW 49
>ZFIN|ZDB-GENE-040426-1049 [details] [associations]
symbol:pwp1 "PWP1 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1049
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:11137 GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:CU571163 EMBL:BC049457 IPI:IPI00497637 RefSeq:NP_956586.1
UniGene:Dr.79178 STRING:Q7ZWE1 Ensembl:ENSDART00000003790
GeneID:393262 KEGG:dre:393262 InParanoid:Q7ZWE1 NextBio:20814321
Uniprot:Q7ZWE1
Length = 490
Score = 145 (56.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 46/188 (24%), Positives = 82/188 (43%)
Query: 107 RTELKSLLNSNKTSE----FSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQL 162
+ E K + K +E + A+ W +A+ S D T ++WD+++ L
Sbjct: 234 KKEKKKKKKAKKAAEPIEGHTDAVLDLSWNRLVRNVLASASADETVILWDLEKGKPAATL 293
Query: 163 VAHDREVYDISWGGFNVFASVSG--DCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNK 220
H +V + + F +SG D SV ++D R + S I+ Q + R+ W+
Sbjct: 294 AKHTDKVQTLKFHPFEAQTLISGSFDKSVILYDCRSPDDSHRIWRFSGQ---VERVTWDH 350
Query: 221 ADP-RFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSR 279
P F+A+ + + LD R PV L H+G V+G+ + L + + D
Sbjct: 351 FSPCNFLAST--EDGFIYCLDAR-SDKPVFTLRAHDGEVSGMDLSSQIRGCLVTCSADKH 407
Query: 280 ALIWEVVG 287
IW+++G
Sbjct: 408 VKIWDILG 415
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 48/208 (23%), Positives = 86/208 (41%)
Query: 128 SFDWAGFDTRRVATCSVDTTCVIWD-IDR---EILETQLVAHDREVYDISWGGFN--VFA 181
+ DW+ T R+ T +W D + + V H R V D+ W VFA
Sbjct: 219 ALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFA 278
Query: 182 SVSGDCSVRVFDLRDK-ERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S S D S+R++D+R ++ ++ D + + W++ +P F+ + G D + + D
Sbjct: 279 SCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREP-FLLSGG-DDGALKIWD 336
Query: 241 IR-FPT-NPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVV---GPGYRSGNG 295
+R F + +PV +H V + W P + D + W++ P
Sbjct: 337 LRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVERDPEAGDVEA 396
Query: 296 GPS-GDVEPELCY--QSMAEINVVRWSP 320
P D+ +L + Q E+ + W P
Sbjct: 397 DPGLADLPQQLLFVHQGETELKELHWHP 424
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 32/128 (25%), Positives = 57/128 (44%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDI----DREILETQLVAHDREVYDISWGGFNVF 180
++ W+ + A+CS D + IWDI + + T AHD +V ISW F
Sbjct: 263 SVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPF 322
Query: 181 ASVSGDC-SVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVL 239
GD +++++DLR + + + P+ +EW+ D A G D +++
Sbjct: 323 LLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGAD-HQITQW 381
Query: 240 DIRFPTNP 247
D+ +P
Sbjct: 382 DLAVERDP 389
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 140 (54.3 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 50/205 (24%), Positives = 87/205 (42%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRR-VATCSVDTT 147
+V SGD SL+LW D L K E + + S DW+ + V + S D T
Sbjct: 83 LVTCSGDGSLQLW----DTARATGPLQVFK--EHTQEVYSVDWSQTRGEQLVVSGSWDQT 136
Query: 148 CVIWD--IDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTII 203
+WD + + + + H+ +Y W FAS SGD ++R++D++ ++
Sbjct: 137 VKLWDPTVGKSLCTFR--GHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIVV 194
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
P +L +W K + + T +D + + D+R PV L H ++ + +
Sbjct: 195 ---PAHQAEILSCDWCKYNENLVVTGAVDCS-LRGWDLRNVQQPVFELLGHTYAIRRVKF 250
Query: 264 APLYGRRLCSVADDSRALIWEVVGP 288
+P + L S + D W P
Sbjct: 251 SPFHASVLASCSYDFTVRFWNFSKP 275
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 140 (54.3 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 52/210 (24%), Positives = 88/210 (41%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTC 148
+ + GD S+R+W D KS+L + W+ +A+ S D T
Sbjct: 31 LASCGGDRSVRIWGREGDSWICKSVLCEGH----QRTVRKVAWSPCGNY-LASASFDATT 85
Query: 149 VIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDL--RDKERSTII 203
IW + + E T L H+ EV ++W N+ A+ S D SV V+++ D+ +
Sbjct: 86 CIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV 145
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
+ QD + + W+ + +A+ D + + L HE +V +++
Sbjct: 146 LNSHTQD--VKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202
Query: 264 APLYGRRLCSVADDSRALIWEVVGPGYRSG 293
P G+RL S +DD IW PG G
Sbjct: 203 DPS-GQRLASCSDDRTVRIWRQYLPGNEQG 231
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 142 (55.0 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 56/245 (22%), Positives = 99/245 (40%)
Query: 99 RLWEIHDDRTELKSLLNSNKTS-----EFSSAIT---SFDWAGFDTRRVATCSVDTTCVI 150
RL ++ DD L + L +T FS + + DW+ R+ T +
Sbjct: 182 RLLQVVDDPQALATFLRDEQTRMKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHL 241
Query: 151 WD-IDR---EILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDK-ERSTII 203
W D + + V H R V D+ W VFAS S D S+R++D+R ++ ++
Sbjct: 242 WTPTDGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACML 301
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPT-NPVVVLSKHEGSVNGI 261
D + + W+ +P F+ + G D + V D+R F + +PV +H V +
Sbjct: 302 TTATAHDGDVNVINWSHREP-FLLSGG-DDGALKVWDLRQFKSGSPVATFKQHVAPVTSV 359
Query: 262 SWAPLYGRRLCSVADDSRALIWEVV---GPGYRSGNGGPS-GDVEPELCY--QSMAEINV 315
W P + D++ W++ P P D+ +L + Q ++
Sbjct: 360 EWHPQDSGVFAASGADNQITQWDLAVERDPEAGDAETDPGLADLPQQLLFVHQGETDLKE 419
Query: 316 VRWSP 320
+ W P
Sbjct: 420 LHWHP 424
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 136 (52.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 65/273 (23%), Positives = 113/273 (41%)
Query: 88 PDIVATSGDSLRLW----EIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCS 143
P+I+AT G+ + HD T ++L + + W +AT +
Sbjct: 144 PEIIATMGEGGNAYIFDTTCHDALTTGEALPQAVLKGHTAEGF-GLCWNPNLPGNLATGA 202
Query: 144 VDTTCVIWDIDREIL---ETQLVA-------HDREVYDISWGGFN--VFASVSGDCSVRV 191
D +WD+ + ET++++ H V D+ + + + ASVS DC++++
Sbjct: 203 EDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQI 262
Query: 192 FDLR---DKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPV 248
D R ++E +I + + + N + +AT D V + D+R P +
Sbjct: 263 HDTRLNPEEEAPKVIQAHSKA---INAVAINPFNDYLLATASADKT-VALWDLRNPYQRL 318
Query: 249 VVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCYQ 308
L HE V G+ W+P L S + D R IW++ G + D PEL +
Sbjct: 319 HTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQ-TPEDAEDGSPELLFM 377
Query: 309 SMAEINVVR---WSPLELDWI--AIAFVNKLQL 336
N + W P E W+ ++A N LQ+
Sbjct: 378 HGGHTNRISEFSWCPNER-WVVGSLADDNILQI 409
Score = 46 (21.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 11 VHTYMAQWPISTVAWSVRHDRKS---------RLAVGSFL----EDYSN--KIELVNFNP 55
V T+ +WP T+ W D+K+ RL +G+ ++Y ++L NF+
Sbjct: 44 VITHALEWPSLTIQWLP--DKKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDE 101
Query: 56 ETSDFS 61
+T++F+
Sbjct: 102 DTTEFT 107
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 139 (54.0 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTC 148
+ + GD ++R+W D E K++L + W+ +A+ S D T
Sbjct: 31 LASCGGDRTIRIWGREGDSWECKTVLQDGH----QRTVRKVAWSPCGNY-LASASFDATT 85
Query: 149 VIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDL-RDKERSTI-I 203
IW + E T L H+ EV ++W N+ A+ S D SV ++++ + E + +
Sbjct: 86 CIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEENEYECVSV 145
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
+ QD + + W+ +A+ D+N V + L H +V G+++
Sbjct: 146 VNSHTQD--VKHVVWHPTQ-ELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF 202
Query: 264 APLYGRRLCSVADDSRALIWEVVGP-GYRSG 293
P G+RL S +DD IW+ P G + G
Sbjct: 203 DPS-GQRLASCSDDCTVKIWKECQPEGGQEG 232
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 57/236 (24%), Positives = 98/236 (41%)
Query: 71 PYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSF 129
P P + +F + + + GD S+R+W D KS+L +
Sbjct: 12 PAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGH----QRTVRKV 67
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGD 186
W+ +A+ S D T IW +++ E T L H+ EV ++W N+ A+ S D
Sbjct: 68 AWSPCGNY-LASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 187 CSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN 246
SV V++ + + + P + + ++ W+ + +A+ D + +
Sbjct: 127 KSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQ-ELLASASYDDTVKLYREEEDDWV 185
Query: 247 PVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSG---NGG-PS 298
L HE +V +++ P G+RL S +DD IW PG G NG PS
Sbjct: 186 CCATLEGHESTVWSLAFDPS-GQRLASCSDDRTVRIWRQYLPGNEQGVACNGSDPS 240
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 139 (54.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 58/222 (26%), Positives = 99/222 (44%)
Query: 90 IVATSGD--SLRLWEIHDDRTEL---KSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
++AT G+ ++R+W DD T K++L+ T I W+ R +A+ S
Sbjct: 28 VLATCGEDKTIRIWA--DDGTGRWVPKTVLSDGHTR----TIRDVAWSPCG-RFLASASF 80
Query: 145 DTTCVIWDIDREILETQ--LVAHDREVYDISWGGFN-VFASVSGDCSVRVFDL--RDKER 199
D T IWD E L H+ EV +SW + A+ S D SV ++++ D+
Sbjct: 81 DATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYE 140
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLDIRFPT-NPVVVLSKHEGS 257
+ QD + ++EW+ + +A+ D+ ++ D+ + L+ H+ +
Sbjct: 141 CAAVLNTHSQD--VKKVEWHPNED-VLASASYDNTIQLYREDLADSDWSSFDTLASHDST 197
Query: 258 VNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSG 299
V I++ G RL S +DD IW+ PG G P G
Sbjct: 198 VWSIAF-DASGSRLASCSDDQTVRIWQEYKPGNEFGVACPDG 238
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/218 (23%), Positives = 94/218 (43%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W + + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRIWSLTGNTWSTKTILSDGH----KRTIREIQWSPCG-QYLASASFDA 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR--DKERST 201
T IW E L H+ EV +SW + A+ S D SV ++++ D+
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 202 IIYENPVQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLD-IRFPTNPVVVLSKHEGSVN 259
+ + QD + R+ W+ +A+ D+ K+ + I + L+ H ++
Sbjct: 142 AVLNSHTQD--VKRVVWHPTK-EILASASYDNTIKMYAEEPIDNDWDCTATLTSHTSTIW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
GI + G RL S +DD+ IW PG +G P
Sbjct: 199 GIDF-DADGERLVSCSDDTTVKIWRAYHPGNSAGVATP 235
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 36/136 (26%), Positives = 59/136 (43%)
Query: 155 REILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPL 213
R ILE L H ++ ++W NVFAS D ++R++ L ST + +
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTI 62
Query: 214 LRLEWNKADPRFMATVGMDSNKVVVLDI--RFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
++W+ +++A+ D+ + F N L HE V +SW+ G L
Sbjct: 63 REIQWSPCG-QYLASASFDATTAIWSKSSGEFECN--ATLEGHENEVKSVSWSRS-GGLL 118
Query: 272 CSVADDSRALIWEVVG 287
+ + D IWEV G
Sbjct: 119 ATCSRDKSVWIWEVAG 134
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/218 (25%), Positives = 94/218 (43%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W + + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRIWSLTGNTWSTKTILSDGH----KRTIREIRWSPCG-QYLASASFDA 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR-DKERSTI 202
T IW E L H+ EV +SW + A+ S D SV ++++ D E
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 203 IYENP-VQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLD-IRFPTNPVVVLSKHEGSVN 259
NP QD + R+ W+ +A+ D+ K+ + I + L+ H +V
Sbjct: 142 AVLNPHTQD--VKRVVWHPTKD-ILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
GI + G RL S +DD+ IW PG +G P
Sbjct: 199 GIDF-DADGERLVSCSDDTTIKIWRAYHPGNTAGVATP 235
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 155 REILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPL 213
R ILE L H ++ ++W NVFAS D ++R++ L ST + +
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTI 62
Query: 214 LRLEWNKADPRFMATVGMDSNKVVVLDI--RFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
+ W+ +++A+ D+ + F N L HE V +SW+ G L
Sbjct: 63 REIRWSPCG-QYLASASFDATTAIWSKSSGEFECN--ATLEGHENEVKSVSWSRS-GGLL 118
Query: 272 CSVADDSRALIWEVVG 287
+ + D IWEV G
Sbjct: 119 ATCSRDKSVWIWEVAG 134
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 55/218 (25%), Positives = 95/218 (43%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W + + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRIWSLTGNTWSTKTILSDGH----KRTIREIRWSPCG-QYLASASFDA 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR-DKERSTI 202
T IW E L H+ EV +SW + A+ S D SV ++++ D E
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 203 IYENP-VQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLD-IRFPTNPVVVLSKHEGSVN 259
NP QD + R+ W+ +A+ D+ K+ + I + L+ H +V
Sbjct: 142 AVLNPHTQD--VKRVVWHPTKD-VLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
GI + G RL S +DD+ IW+ PG +G P
Sbjct: 199 GIDF-DADGERLVSCSDDTTIKIWKAYHPGNTAGVATP 235
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 155 REILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPL 213
R ILE L H ++ ++W NVFAS D ++R++ L ST + +
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTI 62
Query: 214 LRLEWNKADPRFMATVGMDSNKVVVLDI--RFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
+ W+ +++A+ D+ + F N L HE V +SW+ G L
Sbjct: 63 REIRWSPCG-QYLASASFDATTAIWSKSSGEFECN--ATLEGHENEVKSVSWSRS-GGLL 118
Query: 272 CSVADDSRALIWEVVG 287
+ + D IWEV G
Sbjct: 119 ATCSRDKSVWIWEVAG 134
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 137 (53.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 51/218 (23%), Positives = 94/218 (43%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRIWSLTGSTWSTKTILSDGH----KRTIREIRWSPCG-QYLASASFDA 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR--DKERST 201
T IW E L H+ EV +SW + A+ S D SV ++++ D+
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 202 IIYENPVQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLD-IRFPTNPVVVLSKHEGSVN 259
+ + QD + R+ W+ +A+ D+ K+ D + + L+ H ++
Sbjct: 142 AVLNSHTQD--VKRVVWHPTK-EVLASASYDNTIKMYAEDPVDNDWDCTATLTSHTSTIW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
GI + G RL S +DD+ IW+ PG +G P
Sbjct: 199 GIDF-DADGERLVSCSDDTTIKIWKAYHPGNSAGVATP 235
Score = 116 (45.9 bits), Expect = 0.00036, P = 0.00036
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 155 REILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPL 213
R ILE L H ++ ++W NVFAS D ++R++ L ST + +
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTI 62
Query: 214 LRLEWNKADPRFMATVGMDSNKVVVLDI--RFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
+ W+ +++A+ D+ + F N L HE V +SW+ G L
Sbjct: 63 REIRWSPCG-QYLASASFDATTAIWSKSSGEFECN--ATLEGHENEVKSVSWSRS-GGLL 118
Query: 272 CSVADDSRALIWEVVG 287
+ + D IWEV G
Sbjct: 119 ATCSRDKSVWIWEVAG 134
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 44/183 (24%), Positives = 83/183 (45%)
Query: 151 WDIDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLR-DKERSTIIYENP 207
W +D+ L H + V D+ W +V AS S D ++R++D R +++ ++
Sbjct: 258 WKVDQR----PLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCED 313
Query: 208 VQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPTN-PVVVLSKHEGSVNGISWAP 265
+ + WN+ +P F+A+ G D + + D+R F + P+ H + + W+P
Sbjct: 314 AHQSDVNVISWNRNEP-FIASGG-DDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSP 371
Query: 266 LYGRRLCSVADDSRALIWEV-VGPGY-RSGNGGPSGDV----EPELCY--QSMAEINVVR 317
L S DD + +W++ V ++ + + DV P+L + Q EI +
Sbjct: 372 AEATVLASGGDDDQIALWDLAVEKDIDQAVDPAQNEDVLNKLPPQLLFIHQGQKEIKELH 431
Query: 318 WSP 320
W P
Sbjct: 432 WHP 434
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 39/149 (26%), Positives = 70/149 (46%)
Query: 126 ITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVS 184
++ W D +ATCS D T +WD+ ++T+ + + +D+S+ N + + S
Sbjct: 264 VSGVQW--IDNTTIATCSWDHTIKLWDLSMGGIKTEFTGN-KSFFDLSYSPLNGMIITAS 320
Query: 185 GDCSVRVFDLRDKE----RSTII-YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVL 239
D ++R++D R K ++T + + VQ C W+ + ++ G N+V +
Sbjct: 321 PDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTC-----RWSTTN-EYLFVSGAYDNRVKLW 374
Query: 240 DIRFPTNPVVVLSKHEGSVNGISWA-PLY 267
D R P P+ L HE V W+ P Y
Sbjct: 375 DYRSPKAPIFELIGHEDKVLACDWSNPKY 403
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 142 (55.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 47/210 (22%), Positives = 95/210 (45%)
Query: 87 NPD---IVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDW--AGFDTRR--V 139
+PD ++ D +++ + ++ ++ S L + KT + W + + R +
Sbjct: 27 SPDSTKLIVAGRDIVKIVSVQNNEFKVTSNLRAGKTQSLNYTGNDCCWHPSLLENYRFLI 86
Query: 140 ATCSVDTTCVIWDIDRE---ILETQLVAHDREVYDISWGGFNVFASVSG--DCSVRVFDL 194
AT + + VIW+ RE +E H R V ++W + ++G D ++R++D+
Sbjct: 87 ATAATNGAVVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDI 146
Query: 195 RDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKH 254
RD ++ I +P + + +++N + A D+ + + DIR PT V ++ H
Sbjct: 147 RDSANASKITFSPKSES-IRDVQFNPSQANQFAAA-FDNGTIQLWDIRKPTIAVEKITSH 204
Query: 255 EGSVNGISWAPLYGRRLCSVADDSRALIWE 284
+G V I W P + S D +W+
Sbjct: 205 QGLVLTIDWHPEEKNIIASGGRDRAIRVWD 234
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 51/226 (22%), Positives = 97/226 (42%)
Query: 65 RLIFDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSS 124
R+ DH +A+ P E L+ + + ++LR+W+I D K + S K S
Sbjct: 110 RVFTDHSRAVNKLAWHP--EKLDCILTGSQDNTLRMWDIRDSANASK-ITFSPK----SE 162
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQ-LVAHDREVYDISWGGF--NVFA 181
+I + + A + T +WDI + + + + +H V I W N+ A
Sbjct: 163 SIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIA 222
Query: 182 SVSGDCSVRVFDLRD-KERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSN-KVVVL 239
S D ++RV+D + K + + + V R++W + +A+ + ++ +
Sbjct: 223 SGGRDRAIRVWDFSNGKSLNNVSTISSVS-----RIKWRPGNKWHIASCSSIVDFQIHIW 277
Query: 240 DIRFPTNPVVVLSKHEGSVNGISW-APLYGRRLCSVADDSRALIWE 284
D++ P P+ + H G+ W +P L S + DS L+ E
Sbjct: 278 DVKKPYIPLFSFTDHRDVPTGLIWKSP---SSLISCSKDSHLLLNE 320
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 40/162 (24%), Positives = 78/162 (48%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASV 183
+I++ W DT + T S D T IWD+ E ++T+ ++ ++ ++D S+ N + +
Sbjct: 257 SISAVQW--IDTSTLLTTSWDHTMKIWDLSLEGIKTE-ISTNKSIFDASYSNLNRLIVTA 313
Query: 184 SGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF 243
S D ++R++D R + S + + + + W+ + F+ G N+ + D R
Sbjct: 314 SADKNLRLYDPRTNQGSIVRNTYLGHNAWVQTVMWSTTE-EFLFVSGAYDNQNKLWDCRS 372
Query: 244 PTNPVVVLSKHEGSVNGISWA-PLYGRRLCSVADDSRALIWE 284
P P+ L H V I W+ P Y +CS D+ +++
Sbjct: 373 PKAPLYDLLGHGEKVLDIDWSNPKY---ICSGGADNTVRVFK 411
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 58/276 (21%), Positives = 115/276 (41%)
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGDSL----RLWEIHDDRTELKSLLNSNKTSEF 122
++ HP + + P +++ + D L +E + +E L + ++
Sbjct: 125 LYSHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASE-SPLKPKYRLTKH 183
Query: 123 SSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR-------EILETQLVAHDREVYDIS-- 173
+ TS W + + S D T WD++ +L+ + +H+++V D+
Sbjct: 184 TQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFH 243
Query: 174 WGGFNVFASVSGDCSVRVFDLRDKERSTIIYENP-VQDCPLLRLEWNKADPRFMATVGMD 232
+ ++ ASVS D + V D+R + ST + P+ + +N + +AT D
Sbjct: 244 YKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTD 303
Query: 233 SNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRS 292
+ + D+R + L HE V IS++P L S + D R L+W++ R
Sbjct: 304 KT-IALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLS----RI 358
Query: 293 GNGGPSGDVE---PELCYQSMAEINVVRWSPLELDW 325
G P+ + + PEL + + +++DW
Sbjct: 359 GEDQPAEEAQDGPPELLFMHGGHTSCT----IDMDW 390
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 55/218 (25%), Positives = 94/218 (43%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W + + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRIWSLTGNTWGTKTILSDGH----KRTIREIRWSPCG-QYLASASFDA 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR-DKERSTI 202
T IW E L H+ EV +SW + A+ S D SV ++++ D E
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 203 IYENP-VQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLD-IRFPTNPVVVLSKHEGSVN 259
NP QD + R+ W+ +A+ D+ K+ + I + L+ H +V
Sbjct: 142 AVLNPHTQD--VKRVVWHPTKD-VLASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
GI + G RL S +DD+ IW PG +G P
Sbjct: 199 GIDF-DADGERLVSCSDDTTIKIWRAYHPGNTAGVATP 235
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 40/181 (22%), Positives = 78/181 (43%)
Query: 151 WDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDK-ERSTIIYENP 207
W +D+ + H R V D+ W VFAS S D S+R++D+R ++ ++
Sbjct: 244 WHVDQR----PFMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTS 299
Query: 208 VQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPT-NPVVVLSKHEGSVNGISWAP 265
D + + W++ +P F+ + G D + + D+R F + +PV +H + + W P
Sbjct: 300 AHDGDVNVINWSRREP-FLLSGG-DDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHP 357
Query: 266 LYGRRLCSVADDSRALIWEVV---GPGYRSGNGGPS-GDVEPELCY--QSMAEINVVRWS 319
+ D++ W++ P P D+ +L + Q ++ + W
Sbjct: 358 QDSGVFAASGADNQITQWDLAVERDPEAGDTETDPGLADLPQQLLFVHQGETDLKELHWH 417
Query: 320 P 320
P
Sbjct: 418 P 418
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 32/128 (25%), Positives = 57/128 (44%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDI----DREILETQLVAHDREVYDISWGGFNVF 180
++ W+ + A+CS D + IWDI + + T AHD +V I+W F
Sbjct: 257 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPF 316
Query: 181 ASVSGDC-SVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVL 239
GD +++++DLR + + + P+ +EW+ D A G D N++
Sbjct: 317 LLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGAD-NQITQW 375
Query: 240 DIRFPTNP 247
D+ +P
Sbjct: 376 DLAVERDP 383
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 151 WDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKE-RSTIIYENP 207
W++D+ V H R V D+ W VFAS S D S+R++D+R ++ ++
Sbjct: 249 WNVDQR----PFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAA 304
Query: 208 VQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPT-NPVVVLSKHEGSVNGISWAP 265
D + + W++ +P F+ + G D + V D+R F + +PV +H V + W P
Sbjct: 305 AHDGDVNVISWSRREP-FLLSGG-DDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHP 362
Query: 266 LYGRRLCSVADDSRALIWEV-VGPGYRSGNG--GPSGDVEPE---LCYQSMAEINVVRWS 319
+ D++ W++ V SG P P+ +Q ++ + W
Sbjct: 363 QDSGVFAASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGETDLKELHWH 422
Query: 320 P 320
P
Sbjct: 423 P 423
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/128 (26%), Positives = 57/128 (44%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDI----DREILETQLVAHDREVYDISWGGFNVF 180
++ W+ + A+CS D + IWDI + + T AHD +V ISW F
Sbjct: 262 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPF 321
Query: 181 ASVSGDC-SVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVL 239
GD +++V+DLR + + + P+ +EW+ D A G D N++
Sbjct: 322 LLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGAD-NQITQW 380
Query: 240 DIRFPTNP 247
D+ +P
Sbjct: 381 DLAVERDP 388
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 137 (53.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 151 WDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKE-RSTIIYENP 207
W++D+ V H R V D+ W VFAS S D S+R++D+R ++ ++
Sbjct: 250 WNVDQR----PFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAT 305
Query: 208 VQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPT-NPVVVLSKHEGSVNGISWAP 265
D + + W++ +P F+ + G D + V D+R F + +PV +H V + W P
Sbjct: 306 AHDGDVNVISWSRREP-FLLSGG-DDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHP 363
Query: 266 LYGRRLCSVADDSRALIWEV-VGPGYRSGNG--GPSGDVEPE---LCYQSMAEINVVRWS 319
+ D++ W++ V SG P P+ +Q ++ + W
Sbjct: 364 QDSGVFAASGADNQITQWDLAVERDPESGETETDPGLAALPQQLLFVHQGETDLKELHWH 423
Query: 320 P 320
P
Sbjct: 424 P 424
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 34/128 (26%), Positives = 57/128 (44%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDI----DREILETQLVAHDREVYDISWGGFNVF 180
++ W+ + A+CS D + IWDI + + T AHD +V ISW F
Sbjct: 263 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPF 322
Query: 181 ASVSGDC-SVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVL 239
GD +++V+DLR + + + P+ +EW+ D A G D N++
Sbjct: 323 LLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGAD-NQITQW 381
Query: 240 DIRFPTNP 247
D+ +P
Sbjct: 382 DLAVERDP 389
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 136 (52.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 65/297 (21%), Positives = 113/297 (38%)
Query: 63 DNRLIFDHPYTPTNIAFFPSEETLNPDIVATSG--DSLRLWEIHDDRTELKS--LLNSNK 118
D + +HP + P NP I+A+ G D + +++ +E K +
Sbjct: 111 DTEIKINHPGEVHRARYMPH----NPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLR 166
Query: 119 TSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDID-REILETQLV------AHDREVYD 171
W+ + T D WDI+ + + Q+V H D
Sbjct: 167 LKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAED 226
Query: 172 ISWGGFN--VFASVSGDCSVRVFDLRD-KERSTIIYENPVQDCPLLRLEWNKADPRFMAT 228
+S+ + VF SV D + ++DLR K + T + +C + +N +AT
Sbjct: 227 VSFHALHNFVFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNC----ITFNPFSEYILAT 282
Query: 229 VGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGP 288
+D V + D+R + L H + +S++P Y L S D R ++W++
Sbjct: 283 GSVDKT-VALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKI 341
Query: 289 GYRSGNGGPSGD-VEPELCYQSMAEINVVR---WSPLELDWIAIAF--VNKLQLLKV 339
S + S D V PE+ + V W+P W + N LQ+ +V
Sbjct: 342 QDPSSSSAASSDSVPPEVIFIHAGHTGKVADFSWNP-NRPWTICSSDEFNALQVWEV 397
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 133 (51.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 50/211 (23%), Positives = 93/211 (44%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTC 148
+ + GD ++R+W D+ K++L I S W+ T +A+ S D T
Sbjct: 20 LASCGGDKTIRIWGKEGDKWICKTILEDGH----QRTIRSLGWSPCGTF-LASASFDATT 74
Query: 149 VIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLRDKER---STI 202
IWD E L H+ EV + W ++ A+ D SV ++++++ + +++
Sbjct: 75 CIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYECASV 134
Query: 203 IYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGIS 262
I+ + QD + ++ W+ +A+ D + + + L HE +V IS
Sbjct: 135 IHSH-TQD--VKKVVWHPTK-EILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSIS 190
Query: 263 WAPLYGRRLCSVADDSRALIWEVVGPGYRSG 293
+ G R+ S +DD IW+ PG + G
Sbjct: 191 FDGS-GDRIVSCSDDKTVRIWKSYPPGNQEG 220
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 53/215 (24%), Positives = 90/215 (41%)
Query: 92 ATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCV 149
A+ G+ ++R+W + + K++L+ I W+ + +A+ S D T
Sbjct: 30 ASCGEDKAIRIWSLSGNSWSTKTILSDGH----KRTIREIRWSPCG-QYLASASFDATTA 84
Query: 150 IWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR-DKERSTIIYE 205
IW E L H+ EV +SW + A+ S D SV ++++ D E
Sbjct: 85 IWSKSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRDKSVWIWEVAGDDEFECAAVL 144
Query: 206 NP-VQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN--PVVVLSKHEGSVNGIS 262
NP QD + R+ W+ +A+ D+ + + ++ LS H +V I
Sbjct: 145 NPHTQD--VKRVVWHPTK-EILASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSID 201
Query: 263 WAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
+ G RL S +DD+ IW PG +G P
Sbjct: 202 F-DADGERLVSCSDDTTLKIWRAYHPGNDAGVATP 235
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 35/136 (25%), Positives = 57/136 (41%)
Query: 155 REILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPL 213
R ILE L H ++ ++W N FAS D ++R++ L ST + +
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNTFASCGEDKAIRIWSLSGNSWSTKTILSDGHKRTI 62
Query: 214 LRLEWNKADPRFMATVGMDSNKVVVLDI--RFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
+ W+ +++A+ D+ + F N L HE V +SW+ G L
Sbjct: 63 REIRWSPCG-QYLASASFDATTAIWSKSSGEFECN--ATLEGHENEVKSVSWSKS-GGLL 118
Query: 272 CSVADDSRALIWEVVG 287
+ + D IWEV G
Sbjct: 119 ATCSRDKSVWIWEVAG 134
Score = 85 (35.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 33/123 (26%), Positives = 51/123 (41%)
Query: 120 SEFSSAITSFDWAGFDTRRVATCSVDTTCVIW-------DIDREILETQLV--------- 163
S +S + S D+ D R+ +CS DTT IW D + Q V
Sbjct: 191 SSHTSTVWSIDFDA-DGERLVSCSDDTTLKIWRAYHPGNDAGVATPDKQTVWKCVCTLSG 249
Query: 164 AHDREVYDISWGGFN-VFASVSGDCSVRVF-DLRDKERST-----IIYENPVQDCPLLRL 216
H R +YD+SW + A+ GD +R+F + D +R + E + + +
Sbjct: 250 QHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKRDEPTFEQVTAEESAHEQDVNSV 309
Query: 217 EWN 219
EWN
Sbjct: 310 EWN 312
Score = 75 (31.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 252 SKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVV 286
S HE VN + W P+ +L S +DD IW+++
Sbjct: 300 SAHEQDVNSVEWNPVMAGQLISCSDDGTIKIWKML 334
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 134 (52.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 36/140 (25%), Positives = 63/140 (45%)
Query: 151 WDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPV 208
W +D+ V H R V D+ W VFAS S D S+R++D+R + P
Sbjct: 249 WHVDQR----PFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPA 304
Query: 209 -QDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPT-NPVVVLSKHEGSVNGISWAP 265
+ + + W++ +P F+ + G D + V D+R F + +PV +H V + W P
Sbjct: 305 AHNGDVNVISWSRQEP-FLLSGG-DDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHP 362
Query: 266 LYGRRLCSVADDSRALIWEV 285
+ D++ W++
Sbjct: 363 QDSGVFAASGADNQITQWDL 382
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 33/128 (25%), Positives = 57/128 (44%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDI----DREILETQLVAHDREVYDISWGGFNVF 180
++ W+ + A+CS D + IWDI + + T AH+ +V ISW F
Sbjct: 262 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPF 321
Query: 181 ASVSGDC-SVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVL 239
GD +++V+DLR + + + P+ +EW+ D A G D N++
Sbjct: 322 LLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGAD-NQITQW 380
Query: 240 DIRFPTNP 247
D+ +P
Sbjct: 381 DLAVERDP 388
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 133 (51.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 63/282 (22%), Positives = 123/282 (43%)
Query: 68 FDHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAIT 127
++H T + P + P+IVAT ++ ++ L+S L +K + ++ + +
Sbjct: 115 YEHEEEITRARYMPQD----PNIVATINGQGTVF-LYSRSEGLQSTLKFHKDNGYALSFS 169
Query: 128 SFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVA-----HDREVYDISWGGFN--VF 180
+ G R+ + S D T +W++ T+ V H + D W FN +F
Sbjct: 170 TLV-KG----RLLSGSDDHTVALWEVGSGGDPTKPVRTWNDLHSDIINDNKWHNFNKDLF 224
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
+VS D +++ D+R + + P P L ++ +A GMDS V + D
Sbjct: 225 GTVSEDSLLKINDVRANNTTIDTVKCPQ---PFNTLAFSHHSSNLLAAAGMDSY-VYLYD 280
Query: 241 IRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGD 300
+R P+ +S HE +VN + ++ + S D+R ++W++ G + D
Sbjct: 281 LRNMKEPLHHMSGHEDAVNNLEFSTHVDGVVVSSGSDNRLMMWDLKQIGAEQ-TPDDAED 339
Query: 301 VEPELCYQSM---AEINVVRWSPLELDWIAIAFVNKLQLLKV 339
PEL + +N +P ++ W+ +A + +L+V
Sbjct: 340 GVPELIMVHAGHRSSVNDFDLNP-QIPWL-VASAEEENILQV 379
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 134 (52.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 58/213 (27%), Positives = 90/213 (42%)
Query: 87 NP--DIVAT-SGDSL-RLWEIHDDRTE------LKSLLNSNKTSEFSSA-ITSFDWAGFD 135
NP D++A+ SGDS R+W + ++ T L+ + S+ +TS DW
Sbjct: 178 NPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEG 237
Query: 136 TRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISW---GGFNVFASVSGDCSVRVF 192
T +AT S D IW D + T L H ++ + W G F + A V D + ++
Sbjct: 238 TL-LATGSYDGFARIWTKDGNLAST-LGQHKGPIFALKWNKKGNFILSAGV--DKTTIIW 293
Query: 193 DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
D E + P P L ++W +++ F A+ D + V + P+
Sbjct: 294 DAHTGEAKQ---QFPFHSAPALDVDW-QSNNTF-ASCSTDMC-IHVCKLG-QDRPIKTFQ 346
Query: 253 KHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
H VN I W P G L S +DD IW +
Sbjct: 347 GHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSM 378
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 133 (51.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 47/182 (25%), Positives = 76/182 (41%)
Query: 151 WDIDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTIIYENPV 208
W D + ++H V D+ W NVF+S S D + R++D+R+K++++ + N
Sbjct: 280 WQTD----SSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWDVRNKQKTSALTVNAH 335
Query: 209 QDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF------PTNPVVVLSKHEGSVNGIS 262
+ L WN P +AT G D+ V D+R PV H + I
Sbjct: 336 PGVDVNVLSWNTRVPNLLAT-GADNGVWSVWDLRSLKSSSSVATPVASFKWHRAPIYSIE 394
Query: 263 WAPLYGRRLCSVADDSRALIWE--VVGPGYRSGNGGPSG--DVEPELCYQSMA--EINVV 316
W P + V D++ +W+ V + G DV P+L + M EI +
Sbjct: 395 WHPNEDSVIGVVGADNQISLWDLSVELDEEEQDSRAAEGLQDVPPQLMFIHMGQQEIKEM 454
Query: 317 RW 318
W
Sbjct: 455 HW 456
>TAIR|locus:2174784 [details] [associations]
symbol:FAS2 "AT5G64630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=IDA]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0033186 "CAF-1 complex" evidence=IPI] [GO:0031507
"heterochromatin assembly" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010026 "trichome differentiation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=IGI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0009555 GO:GO:0008283
GO:GO:0006351 GO:GO:0000724 GO:GO:0048366 GO:GO:0009933
GO:GO:0006334 GO:GO:0005678 GO:GO:0031507 EMBL:AB010076
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT GO:GO:0010026
EMBL:AB027230 EMBL:AF375435 EMBL:AY074827 IPI:IPI00534662
RefSeq:NP_568990.1 RefSeq:NP_974991.1 UniGene:At.28741
ProteinModelPortal:Q9SXY1 SMR:Q9SXY1 STRING:Q9SXY1 PRIDE:Q9SXY1
EnsemblPlants:AT5G64630.2 GeneID:836584 KEGG:ath:AT5G64630
GeneFarm:3331 TAIR:At5g64630 InParanoid:Q9SXY1 PhylomeDB:Q9SXY1
ProtClustDB:CLSN2690078 Genevestigator:Q9SXY1 Uniprot:Q9SXY1
Length = 487
Score = 130 (50.8 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 47/186 (25%), Positives = 78/186 (41%)
Query: 19 PISTVAWSVRHDRKSRLAVGSFLEDYSNKIELVNFNP---ETSDFSADNRLIFDHPYTPT 75
P+ TV + H LA DY K+ L+N + S + L + H
Sbjct: 15 PVLTVDF---HPISGLLATAG--ADYDIKLWLINSGQAEKKVPSVSYQSSLTY-HGCAVN 68
Query: 76 NIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFD 135
I F PS E L G L +W++H T +S S + W+ D
Sbjct: 69 TIRFSPSGELLAS---GADGGELFIWKLHPSETN-QSWKVHKSLSFHRKDVLDLQWSPDD 124
Query: 136 TRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVF-ASVSGDCSVRVFDL 194
++ SVD +C+IWD+++ + L AH V ++W + AS+S D + R++
Sbjct: 125 AYLISG-SVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYAN 183
Query: 195 RDKERS 200
+ + +S
Sbjct: 184 KPQTKS 189
Score = 44 (20.5 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 234 NKVVVLDIRFPTNPVVVLSK-HEGSVNGISWAP 265
N V + D P+ VL+ H ++ I+W+P
Sbjct: 320 NSVYIYDTECVA-PIAVLAGLHYAAITDITWSP 351
>CGD|CAL0004530 [details] [associations]
symbol:CDH1 species:5476 "Candida albicans" [GO:0007096
"regulation of exit from mitosis" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0010997 "anaphase-promoting complex binding"
evidence=IEA] [GO:0097027 "ubiquitin-protein ligase activator
activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0010697 "negative regulation of spindle pole body
separation" evidence=IEA] [GO:0008361 "regulation of cell size"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:2000600 "positive regulation of cyclin
catabolic process" evidence=IEA] [GO:0007092 "activation of mitotic
anaphase-promoting complex activity" evidence=IEA] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0004530 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0007096
HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719530.1 RefSeq:XP_719654.1 ProteinModelPortal:Q5ACY4
STRING:Q5ACY4 GeneID:3638700 GeneID:3638814 KEGG:cal:CaO19.2084
KEGG:cal:CaO19.9631 Uniprot:Q5ACY4
Length = 597
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/179 (27%), Positives = 88/179 (49%)
Query: 89 DIVATS-GDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTT 147
D++A GDS+ LW D T+ L N T++ +TS +W G T +A +
Sbjct: 304 DVLAVGLGDSVYLW---DGATQSVDRL-CNLTNK--DKVTSLNWIGTGTH-LAIGTSKGL 356
Query: 148 CVIWDIDR-EILETQLVAHDREVYDISWGGFNVFASVSGDCSVRVFDLRDKERSTIIYEN 206
IWD R + + T + H V ++W ++ +S S D ++ D+R ++ ++N
Sbjct: 357 VEIWDATRIKCIRT-MTGHSLRVSSLAWNE-HILSSGSRDRTILNRDVRIEDHFVNKFDN 414
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAP 265
Q+ + L+WN + + +A+ G D+N + V D P P+ + H +V I+W+P
Sbjct: 415 HKQE--VCGLKWNVEENK-LASGGNDNN-LFVWDGLNP-KPLHQFTDHTAAVKAIAWSP 468
>UNIPROTKB|Q5ACY4 [details] [associations]
symbol:CDH1 "Putative uncharacterized protein CDH1"
species:237561 "Candida albicans SC5314" [GO:0007096 "regulation of
exit from mitosis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004530 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0007096 HOGENOM:HOG000195514 KO:K03364 EMBL:AACQ01000031
EMBL:AACQ01000030 RefSeq:XP_719530.1 RefSeq:XP_719654.1
ProteinModelPortal:Q5ACY4 STRING:Q5ACY4 GeneID:3638700
GeneID:3638814 KEGG:cal:CaO19.2084 KEGG:cal:CaO19.9631
Uniprot:Q5ACY4
Length = 597
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/179 (27%), Positives = 88/179 (49%)
Query: 89 DIVATS-GDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTT 147
D++A GDS+ LW D T+ L N T++ +TS +W G T +A +
Sbjct: 304 DVLAVGLGDSVYLW---DGATQSVDRL-CNLTNK--DKVTSLNWIGTGTH-LAIGTSKGL 356
Query: 148 CVIWDIDR-EILETQLVAHDREVYDISWGGFNVFASVSGDCSVRVFDLRDKERSTIIYEN 206
IWD R + + T + H V ++W ++ +S S D ++ D+R ++ ++N
Sbjct: 357 VEIWDATRIKCIRT-MTGHSLRVSSLAWNE-HILSSGSRDRTILNRDVRIEDHFVNKFDN 414
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAP 265
Q+ + L+WN + + +A+ G D+N + V D P P+ + H +V I+W+P
Sbjct: 415 HKQE--VCGLKWNVEENK-LASGGNDNN-LFVWDGLNP-KPLHQFTDHTAAVKAIAWSP 468
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 55/241 (22%), Positives = 100/241 (41%)
Query: 90 IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTC 148
+ + GD ++R+W D KS+L + W+ +A+ S D T
Sbjct: 31 LASCGGDRTIRIWGKDGDNWVCKSVLGEGH----QRTVRKVSWSPCGNY-LASASFDATT 85
Query: 149 VIWDIDREILE--TQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLRDKER--STII 203
IW +E E T L H+ EV ++W ++ A+ S D SV V+++ ++E +
Sbjct: 86 CIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSV 145
Query: 204 YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
+ QD + + W+ + +A+ D + V L R + V + EG + + W
Sbjct: 146 LNSHTQD--VKHVVWHP-NQELLASASYDDS--VKL-YREEEDDWVCCATLEGHTSTV-W 198
Query: 264 APLY---GRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCYQSMAEINVVRWSP 320
+ + G +L + +DD IW +G G + P+ L + V W+
Sbjct: 199 SLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNH 258
Query: 321 L 321
L
Sbjct: 259 L 259
>FB|FBgn0034937 [details] [associations]
symbol:fzr2 "fizzy-related 2" species:7227 "Drosophila
melanogaster" [GO:0007140 "male meiosis" evidence=IEP] [GO:0008054
"cyclin catabolic process" evidence=IGI] [GO:0010458 "exit from
mitosis" evidence=IEP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0007140 GO:GO:0008054
KO:K03364 GeneTree:ENSGT00580000081606 OrthoDB:EOG4G79F4
EMBL:AY051537 RefSeq:NP_611854.1 UniGene:Dm.4571 SMR:Q9W1F6
STRING:Q9W1F6 EnsemblMetazoa:FBtr0072146 GeneID:37808
KEGG:dme:Dmel_CG16783 UCSC:CG16783-RA CTD:37808 FlyBase:FBgn0034937
InParanoid:Q9W1F6 OMA:QISNLAW GenomeRNAi:37808 NextBio:805507
Uniprot:Q9W1F6
Length = 451
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 51/197 (25%), Positives = 90/197 (45%)
Query: 95 GDSLRLWE-IHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDI 153
G S+ LW + T L N + + IT+ W G + R+VA + IWD
Sbjct: 164 GCSVYLWSAVSGQVTRLCDFNNED------NLITAVSWHG-EGRQVAIGTQSGYVTIWDA 216
Query: 154 DREILETQLVAHDREVYDISWGGFNVFASVSGDCSVRVFDLRDKER--STIIYENPVQDC 211
+ + +L H V ++W G N AS S D S+ D+R+ + + + ++ C
Sbjct: 217 ENQKQINRLEEHSARVTALAWCG-NRLASGSRDRSILQRDIRNPPTHITRCLRGHKLEVC 275
Query: 212 PLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
L +W+ ++ R++A+ G D N+++V +P P+ +H+ V + W+P L
Sbjct: 276 GL---QWSPSN-RYLASGGSD-NRLLVWTDDWP-EPIYAFDEHKAVVKALGWSPHKSGLL 329
Query: 272 CSVADDS-RAL-IWEVV 286
S + R L W V+
Sbjct: 330 ASGGGSADRCLRFWNVL 346
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 55/218 (25%), Positives = 104/218 (47%)
Query: 69 DHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITS 128
DH T++ F P ++ L A++ + +LW+ D T LL + + A +
Sbjct: 296 DHKERATDVVFSPVDDCL---ATASADRTAKLWKT--DGT----LLQTFEGHLDRLARVA 346
Query: 129 FDWAGFDTRRVATCSVDTTCVIWDIDR--EILETQLVAHDREVYDISWGGFNVFASVSG- 185
F +G + + T S D T +WDI+ E+L + H R VY I++ A+ G
Sbjct: 347 FHPSG---KYLGTTSYDKTWRLWDINTGAELLLQE--GHSRSVYGIAFQQDGALAASCGL 401
Query: 186 DCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPT 245
D RV+DLR RS ++++ ++ P+ + ++ + +A+ G D N+ + D+R
Sbjct: 402 DSLARVWDLRTG-RSILVFQGHIK--PVFSVNFSP-NGYHLASGGED-NQCRIWDLRMRK 456
Query: 246 NPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIW 283
+ + ++ H V+ + + P G L + + D + IW
Sbjct: 457 S-LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/224 (25%), Positives = 93/224 (41%)
Query: 75 TNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTE--LKSLLNSNKTSEFSSAITSFDWA 132
T +AF P P ++ G +R+W + D + KS+L T I S W+
Sbjct: 2 TTVAFLPLSF---PFLIFNFGQYIRIWAKNSDSDQWTCKSILTEGHTR----TIRSVAWS 54
Query: 133 GFDTRRVATCSVDTTCVIW---DIDREILETQLVAHDREVYDISWGGFNVF-ASVSGDCS 188
+A+CS D T IW D D E + T L H+ EV ++W V+ AS S D S
Sbjct: 55 PCGNY-LASCSFDATICIWSKKDGDFECMAT-LEGHENEVKCVNWSSSGVYLASCSRDKS 112
Query: 189 VRVFDL--RDKE-RSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPT 245
+++ D+E + + QD + + W+ + + + D+ + ++
Sbjct: 113 AWIWEFIEEDEEYECASVLTDHSQD--VKHVVWSPKE-NALVSASYDNTIKIYKEVDDDW 169
Query: 246 NPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPG 289
L HE +V +S+ G S DD IW+ + G
Sbjct: 170 ECSHTLIGHESTVWSLSFHSS-GELFVSCGDDKVLKIWKCLKSG 212
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 51/213 (23%), Positives = 89/213 (41%)
Query: 92 ATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCV 149
A+ G+ ++R+W + + K++L+ I W+ +A+ S D T
Sbjct: 30 ASCGEDKAIRIWSLSGNTWTTKTILSDGH----KRTIREVRWSPCG-EYLASASFDATTA 84
Query: 150 IWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR--DKERSTIIYEN 206
IW E T L H+ EV +SW + A+ S D SV ++++ D+ +
Sbjct: 85 IWS-KHECTAT-LEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNA 142
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN--PVVVLSKHEGSVNGISWA 264
QD + R+ W+ +A+ D+ + + ++ LS H +V I +
Sbjct: 143 HSQD--VKRVVWHPTK-EILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDF- 198
Query: 265 PLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
G RL S +DD+ IW PG +G P
Sbjct: 199 DADGERLVSCSDDATLKIWRAYHPGNEAGIATP 231
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/218 (22%), Positives = 91/218 (41%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W + + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRVWSLSGNTWSTKTILSDGH----KRTIREIRWSPCG-QYLASASFDA 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR--DKERST 201
T IW E L H+ EV +SW + A+ S D SV ++++ D+
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 202 IIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN--PVVVLSKHEGSVN 259
+ QD + R+ W+ +A+ D+ + + + ++ LS H +V
Sbjct: 142 AVLNAHTQD--VKRVVWHPTKD-ILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
I + G RL S +DD IW PG +G P
Sbjct: 199 SIDF-DAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATP 235
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 155 REILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPL 213
R ILE L H ++ ++W NVFAS D ++RV+ L ST + +
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTI 62
Query: 214 LRLEWNKADPRFMATVGMDSNKVVVLDI--RFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
+ W+ +++A+ D+ + F N L HE V +SW+ G L
Sbjct: 63 REIRWSPCG-QYLASASFDATTAIWSKSSGEFECN--ATLEGHENEVKSVSWSRS-GGLL 118
Query: 272 CSVADDSRALIWEVVG 287
+ + D IWEV G
Sbjct: 119 ATCSRDKSVWIWEVAG 134
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/218 (22%), Positives = 91/218 (41%)
Query: 89 DIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
++ A+ G+ ++R+W + + K++L+ I W+ + +A+ S D
Sbjct: 27 NVFASCGEDKAIRVWSLSGNTWSTKTILSDGH----KRTIREIRWSPCG-QYLASASFDA 81
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR--DKERST 201
T IW E L H+ EV +SW + A+ S D SV ++++ D+
Sbjct: 82 TTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECA 141
Query: 202 IIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN--PVVVLSKHEGSVN 259
+ QD + R+ W+ +A+ D+ + + + ++ LS H +V
Sbjct: 142 AVLNAHTQD--VKRVVWHPTKD-ILASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVW 198
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
I + G RL S +DD IW PG +G P
Sbjct: 199 SIDF-DAEGDRLVSCSDDKTLKIWRAYHPGNDAGIATP 235
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 37/136 (27%), Positives = 58/136 (42%)
Query: 155 REILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPL 213
R ILE L H ++ ++W NVFAS D ++RV+ L ST + +
Sbjct: 3 RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTI 62
Query: 214 LRLEWNKADPRFMATVGMDSNKVVVLDI--RFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
+ W+ +++A+ D+ + F N L HE V +SW+ G L
Sbjct: 63 REIRWSPCG-QYLASASFDATTAIWSKSSGEFECN--ATLEGHENEVKSVSWSRS-GGLL 118
Query: 272 CSVADDSRALIWEVVG 287
+ + D IWEV G
Sbjct: 119 ATCSRDKSVWIWEVAG 134
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/110 (33%), Positives = 57/110 (51%)
Query: 93 TSGDSLRLWEI--HDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVI 150
T G+ +WE+ H D + LK + K S+ IT + D + +ATCS D T +
Sbjct: 179 TKGNCY-VWEMPNHTDASHLKPV---TKFRAHSTYITRILLSS-DVKHLATCSADHTARV 233
Query: 151 WDIDREI-LETQLVAHDREVYDISWGGFNVF-ASVSGDCSVRVFDLRDKE 198
W ID + LET L H R V+D ++ + + + S D VR++DL +E
Sbjct: 234 WSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTRE 283
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 52/213 (24%), Positives = 96/213 (45%)
Query: 90 IVATSGD--SLRLWEIHD-DRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
+ A+ G+ ++R+W D DR +++L T I W+ +A+ S DT
Sbjct: 28 LFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTR----TIRELAWSCCG-HYLASASFDT 82
Query: 147 TCVIWDIDREILETQ--LVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR---DKE-- 198
T +WD E L HD EV ++W N+ A+ S D SV ++++ D+E
Sbjct: 83 TVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDE 142
Query: 199 -RSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLDIRFPTNPVVV-LSKHE 255
+ QD + ++ W+ + +A+ D+ ++ D+ ++ L H
Sbjct: 143 YECVAVLNGHTQD--VKKVCWHPQED-LLASASYDNTIRMYRQDLADSEWEMLEPLESHS 199
Query: 256 GSVNGISWAPLYGRRLCSVADDSRALIWEVVGP 288
+V IS+ G+RL S ++D+ +W+ GP
Sbjct: 200 STVWSISFDAT-GQRLASCSEDTTVKVWQQYGP 231
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 59/234 (25%), Positives = 99/234 (42%)
Query: 61 SADNRLIFDHPYTPTNIAFFPSEET-LNPDIVATSGDSLRLWEIHDDRT--ELKSLLNSN 117
S D +LI YT + P + + A SG+ + + + + LKS +
Sbjct: 74 SQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNV 133
Query: 118 KTSEFSSAITSF-DWAGF-DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG 175
K S SA T + F D + T S DTTC +WDI+ +T V H + ++
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVS 193
Query: 176 -GFNVFASVSGDCSVRVFDLRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMATVGMD 232
FN+F S + D S +++D+R+ R T +E+ + + + T G D
Sbjct: 194 PDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFF------PNGEAICT-GSD 246
Query: 233 SNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAP--LYGRRLCSVADDSRALIWE 284
+ D+R + ++ HE + GI+ L GR L + DD +W+
Sbjct: 247 DASCRLFDLR--ADQELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 65/312 (20%), Positives = 122/312 (39%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S+K E F T + ++ +H + P NP I+AT S D L
Sbjct: 99 SDKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 152
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 153 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 212
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 213 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 331
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 388
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 389 ICSVSEDNIMQI 400
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 65/312 (20%), Positives = 122/312 (39%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S+K E F T + ++ +H + P NP I+AT S D L
Sbjct: 99 SDKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 152
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 153 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 212
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 213 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 331
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 388
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 389 ICSVSEDNIMQI 400
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 65/312 (20%), Positives = 122/312 (39%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S+K E F T + ++ +H + P NP I+AT S D L
Sbjct: 99 SDKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 152
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 153 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 212
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 213 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 331
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 388
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 389 ICSVSEDNIMQI 400
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 65/312 (20%), Positives = 122/312 (39%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S+K E F T + ++ +H + P NP I+AT S D L
Sbjct: 99 SDKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 152
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 153 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 212
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 213 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 331
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 388
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 389 ICSVSEDNIMQI 400
Score = 45 (20.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 51/213 (23%), Positives = 89/213 (41%)
Query: 92 ATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCV 149
A+ G+ ++R+W + + K++L+ I W+ +A+ S D T
Sbjct: 30 ASCGEDKAIRIWSLSGNTWTTKTILSDGH----KRTIREVRWSPCG-EYLASASFDATTA 84
Query: 150 IWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR--DKERSTIIYEN 206
IW E T L H+ EV +SW + A+ S D SV ++++ D+ +
Sbjct: 85 IWS-KHECTAT-LEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNA 142
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN--PVVVLSKHEGSVNGISWA 264
QD + R+ W+ +A+ D+ + + ++ LS H +V I +
Sbjct: 143 HSQD--VKRVVWHPTK-EVLASASYDNTIKMFAESALDSDWDCTATLSSHTSTVWSIDF- 198
Query: 265 PLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
G RL S +DD+ IW PG +G P
Sbjct: 199 DADGERLVSCSDDATLKIWRAYHPGNDAGIATP 231
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/199 (21%), Positives = 78/199 (39%)
Query: 131 WAGFDTRRVATCSVDTTCVIWDIDR----EILETQLVAHDREVYDISWGGFN--VFASVS 184
W+ T +AT + +W + + L H + V D++W + AS S
Sbjct: 236 WSSLKTGDLATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCS 295
Query: 185 GDCSVRVFDLRDKERSTIIYE-NPVQDCPLLRLEWNKADPRFMATVGMDSN-KVVVLD-I 241
D S++++D R + + + + + WN+ + + + G D K+ L I
Sbjct: 296 ADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHE-NLIVSGGDDGELKIWSLKTI 354
Query: 242 RFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDV 301
+F PV + H + + W P + +D + IW++ G G V
Sbjct: 355 QFG-QPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEA--DGQTNIEG-V 410
Query: 302 EPELCYQSMA--EINVVRW 318
P+L + M E+ V W
Sbjct: 411 PPQLMFVHMGQNEVKEVHW 429
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 131 (51.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 43/169 (25%), Positives = 72/169 (42%)
Query: 165 HDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKAD 222
H V ++ W NVFAS S D +V+V+D+R K RS + + + + + W+K
Sbjct: 302 HASSVEELQWSPNEKNVFASASSDGTVKVWDVRSKSRSPAVNVK-ISNTDVNVMTWSKQT 360
Query: 223 PRFMATVGMDSNKVVVLDIRF----PTN-------PVVVLSKHEGSVNGISWAPLYGRRL 271
+AT G D + V D+R P++ PV + H+ + I W P +
Sbjct: 361 SHLLAT-GADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVI 419
Query: 272 CSVADDSRALIWEV-VGPGYRSGNGGPSGDVEPELCY-QSMAEINVVRW 318
+ D+ +W++ V DV P+L + M + V W
Sbjct: 420 AVGSADNTVTLWDLAVELDEEESREAGLADVPPQLLFVHYMESVKEVHW 468
Score = 37 (18.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 22/95 (23%), Positives = 38/95 (40%)
Query: 80 FPSEETLNPDIVATSGDSLRLWEIHDDRTEL-KSLLNSNKTSEFSSAITSFDWAGFDTRR 138
F SE+ + V D+ R E D E+ + +T + S D + +D
Sbjct: 41 FESEDEILEAGVDGRPDAEREEEEKADAMEVDQQTFIPGRTKLAPGEVLSPDPSTYDM-- 98
Query: 139 VATCSVDTTCVIWDIDREILETQLVAHDREVYDIS 173
+ T S C+ +DI R+ L + VY ++
Sbjct: 99 LHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYAVT 133
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 122 (48.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 65/312 (20%), Positives = 121/312 (38%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S K E F T + ++ +H + P NP I+AT S D L
Sbjct: 99 SEKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 152
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 153 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 212
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 213 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 331
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 388
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 389 ICSVSEDNIMQI 400
Score = 45 (20.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 122 (48.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 65/312 (20%), Positives = 121/312 (38%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S K E F T + ++ +H + P NP I+AT S D L
Sbjct: 99 SEKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 152
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 153 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 212
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 213 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 331
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 388
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 389 ICSVSEDNIMQI 400
Score = 45 (20.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 122 (48.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 65/312 (20%), Positives = 121/312 (38%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S K E F T + ++ +H + P NP I+AT S D L
Sbjct: 99 SEKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 152
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 153 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 212
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 213 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 272
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 273 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 331
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 332 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 388
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 389 ICSVSEDNIMQI 400
Score = 45 (20.9 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 128 (50.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 49/167 (29%), Positives = 74/167 (44%)
Query: 123 SSAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGF-NV 179
+ AITS ++ + + S D+T IWD+ RE+L T H + + D ++ +
Sbjct: 250 TKAITSLNFFPNSGHLLLSGSADSTVKIWDVYHQRELLRTYS-GHSKSLSDTTFNTHGDK 308
Query: 180 FASVSGDCSVRVFDLRDKERSTIIYENPVQDCP-LLRLE-WNKADPRFMATVGMDSNKVV 237
F S S D R+ L D E I + P ++R ++ F+A GM NK+V
Sbjct: 309 FLSASFD---RMMKLWDTETGKCIAKFTTGKTPHVVRFNPTSELGHEFVA--GMSDNKIV 363
Query: 238 VLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
D R V H G VN I++ GRR + +DD WE
Sbjct: 364 QFDTRAGNETVQEYDHHLGPVNTITFCD-DGRRFMTTSDDRTLRAWE 409
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 125 (49.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 49/172 (28%), Positives = 76/172 (44%)
Query: 118 KTSEFSSAITSFDWAGF----DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDIS 173
KT +F+ + D AG D + T SVD T +WD+ E + HD +V +
Sbjct: 182 KTMDFNGH--AGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVC 239
Query: 174 W--GGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
+ GF FAS S D + R++DLR ++ YE P ++ + + R++ G+
Sbjct: 240 YHPSGFG-FASCSEDQTARMYDLR-ADQQIAQYEPPQKNTGFTSCALSTSG-RYLMCGGI 296
Query: 232 DSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIW 283
+ N V D LS HE + IS P G L S + D + +W
Sbjct: 297 EGN-VHSWDT-MKQRHTGTLSGHENRITCISLCP-NGMCLASTSWDQQVRLW 345
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 49/194 (25%), Positives = 90/194 (46%)
Query: 94 SGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDI 153
S + LW ++ + S+L +K I W+ D+ + T D + +WD
Sbjct: 82 SDKEIFLWNVYGECINY-SVLKGHK-----GTILELHWST-DSNEIYTACTDKSIGVWDS 134
Query: 154 DREILETQLVAHDREVYDI--SWGGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDC 211
++ L ++ H V + G + AS S D S R+FD R K ST ++++
Sbjct: 135 NKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKG-STHLFQHKY--- 190
Query: 212 PLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRL 271
P+ + ++ A + + T G+D N + V DIR +P+ L+ H+ ++ S + G L
Sbjct: 191 PVTSVCFSDASDQLI-TGGID-NVIRVWDIRNQEDPLYTLASHQDTITSTSVSK-DGAYL 247
Query: 272 CSVADDSRALIWEV 285
S + D+ IW++
Sbjct: 248 LSNSMDNSCKIWDI 261
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 73/298 (24%), Positives = 122/298 (40%)
Query: 11 VHTYMAQWPISTVAW-SVRHDRKSRLAVGSFLEDYSNKIELVNFNPETSDFSADNRLIFD 69
V T+ +WP TVAW V+ + ++ YS IE V TSD N L+
Sbjct: 31 VITHALEWPSLTVAWLPVKTSQPNK--------PYS--IEKVILGTHTSD-EEQNYLMVA 79
Query: 70 HPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSF 129
+ P + A S E+L D T G+ + + + +++ + N E + A
Sbjct: 80 KVHLPVDEA---SIESLKYD--DTKGEVGGIGNVSE---KIEIIQKINHEGEVNRARVMP 131
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDREILET----------QLVAHDREVYDISWGGFNV 179
+ +AT +V + I+D + LE +L H +E Y ISW
Sbjct: 132 Q----NHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKE 187
Query: 180 --FASVSGDCSVRVFDLR--DKERSTIIYENPVQDCPLL--RLEWNKADPRFMATVGMDS 233
S S D S+ ++D+ K ST+ N + + W+ F +VG D
Sbjct: 188 GHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVG-DD 246
Query: 234 NKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYR 291
K+++ D R T P+ V+ H VN +S+ P + + + D +W++ G R
Sbjct: 247 KKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDMRNLGNR 304
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 125 (49.1 bits), Expect = 4.3e-05, Sum P(2) = 4.2e-05
Identities = 61/270 (22%), Positives = 107/270 (39%)
Query: 87 NPDIVAT---SGDSLRL-WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVAT 141
NP I+AT S D L + H + + NS+ W + + + +
Sbjct: 136 NPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGYLLS 195
Query: 142 CSVDTTCVIWDIDREILETQLVA-------HDREVYDISWGGFN--VFASVSGDCSVRVF 192
S D T +WDI E ++V H V D+SW + +F SV+ D + ++
Sbjct: 196 ASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIW 255
Query: 193 DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
D R S + + L +N + F+ G V + D+R +
Sbjct: 256 DTRSNNTSKPSHSVDAYTAEVNCLSFNP-NSEFILASGSPDKTVALWDLRNLKLKLHSFE 314
Query: 253 KHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QS 309
H+ + + W+P L S D R +W++ G + + D PEL +
Sbjct: 315 SHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ-SPEDAEDGPPELLFIHGGH 373
Query: 310 MAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
A+I+ W+P E W+ I V++ +++V
Sbjct: 374 TAKISDFSWNPNE-PWV-ICSVSEDNIMQV 401
Score = 41 (19.5 bits), Expect = 4.3e-05, Sum P(2) = 4.2e-05
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSN 46
V T+ +WP T W R + K RL +G+ D N
Sbjct: 34 VMTHALEWPSLTAQWLPDVTRPEGKDFGIHRLVLGTHTSDEQN 76
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 42/169 (24%), Positives = 77/169 (45%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D + +AT + D +WDI + Q H++++Y + + AS SGD +VR++D
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD 416
Query: 194 LRDKERSTII-YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR--FPTNPVVV 250
+ + T+ E+ V + D +++A +D + V V D+ P +
Sbjct: 417 IENGTALTVFTIEDGVTTVAI------SPDTKYVAAGSLDKS-VRVWDLTQGCPVERLEG 469
Query: 251 LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSG 299
H+ SV ++++P GR L + + D +WE+ P N G G
Sbjct: 470 PDGHKDSVYSVAFSP-NGRDLVTGSLDKTIKLWELATPRGNMQNQGSKG 517
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 121 (47.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ H +V +S F S + D S++++D
Sbjct: 53 DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 112
Query: 194 LRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMA-TVGMDSNKVVVLDIRFPTNPVVV 250
+RD R T I +E+ + P A T G D + D+R + ++
Sbjct: 113 VRDSMCRQTFIGHESDINAVAFF--------PNGYAFTTGSDDATCRLFDLR--ADQELL 162
Query: 251 LSKHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
+ H+ + GI+ GR L + DD IW+ + G R+G
Sbjct: 163 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM-KGDRAG 206
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 121 (47.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 58/270 (21%), Positives = 109/270 (40%)
Query: 87 NPDIVAT---SGDSLRL-WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVAT 141
NP I+AT S D L + H + + N + + W + + +
Sbjct: 126 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLS 185
Query: 142 CSVDTTCVIWDIDR-----EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVF 192
S D T +WDI+ +I++ + + H V D++W + +F SV+ D + ++
Sbjct: 186 ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW 245
Query: 193 DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
D R S + + L +N +AT D V + D+R +
Sbjct: 246 DTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFE 304
Query: 253 KHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QS 309
H+ + + W+P L S D R +W++ G + + D PEL +
Sbjct: 305 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGH 363
Query: 310 MAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
A+I+ W+P E W+ I V++ ++++
Sbjct: 364 TAKISDFSWNPNE-PWV-ICSVSEDNIMQI 391
Score = 45 (20.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 121 (47.7 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 58/270 (21%), Positives = 109/270 (40%)
Query: 87 NPDIVAT---SGDSLRL-WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVAT 141
NP I+AT S D L + H + + N + + W + + +
Sbjct: 126 NPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLS 185
Query: 142 CSVDTTCVIWDIDR-----EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVF 192
S D T +WDI+ +I++ + + H V D++W + +F SV+ D + ++
Sbjct: 186 ASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIW 245
Query: 193 DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
D R S + + L +N +AT D V + D+R +
Sbjct: 246 DTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFE 304
Query: 253 KHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QS 309
H+ + + W+P L S D R +W++ G + + D PEL +
Sbjct: 305 SHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGH 363
Query: 310 MAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
A+I+ W+P E W+ I V++ ++++
Sbjct: 364 TAKISDFSWNPNE-PWV-ICSVSEDNIMQI 391
Score = 45 (20.9 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 124 (48.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 49/213 (23%), Positives = 88/213 (41%)
Query: 92 ATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCV 149
A+ G+ ++R+W + K++L+ I W+ +A+ S D T
Sbjct: 30 ASCGEDKAIRIWSQSGNTWTTKTILSDGH----KRTIREVRWSPCG-EYLASASFDATTA 84
Query: 150 IWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLR--DKERSTIIYEN 206
IW + L H+ EV +SW + A+ S D SV ++++ D+ +
Sbjct: 85 IWS--KHECNATLEGHENEVKSVSWSQSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNA 142
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN--PVVVLSKHEGSVNGISWA 264
QD + R+ W+ + +A+ D+ + + ++ LS H +V I +
Sbjct: 143 HTQD--VKRVVWHPSK-EILASASYDNTIKMYAESALDSDWDCTATLSSHTSTVWSIDFE 199
Query: 265 PLYGRRLCSVADDSRALIWEVVGPGYRSGNGGP 297
G RL S +DD+ IW PG +G P
Sbjct: 200 A-DGERLVSCSDDTTLKIWRAYHPGNEAGIATP 231
Score = 86 (35.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 40/155 (25%), Positives = 67/155 (43%)
Query: 70 HPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKT-SEFSSAITS 128
H + + PS+E L A+ ++++++ + L S + T S +S + S
Sbjct: 143 HTQDVKRVVWHPSKEILAS---ASYDNTIKMYA----ESALDSDWDCTATLSSHTSTVWS 195
Query: 129 FDWAGFDTRRVATCSVDTTCVIWDI------------DR----EILETQLVAHDREVYDI 172
D+ D R+ +CS DTT IW D+ + + T H R VYD+
Sbjct: 196 IDFEA-DGERLVSCSDDTTLKIWRAYHPGNEAGIATPDKTTVWKCVCTVAGQHSRAVYDV 254
Query: 173 SWGGFN-VFASVSGDCSVRVF-DLRDKERSTIIYE 205
SW + AS GD +R+F + D +R +E
Sbjct: 255 SWCKLTGLIASACGDDGIRIFKESSDSKRDEPTFE 289
Score = 73 (30.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 252 SKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
S HE VN + W P+ +L S +DD IW++
Sbjct: 296 SAHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKL 329
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 122 (48.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 65/312 (20%), Positives = 121/312 (38%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S K E F T + ++ +H + P NP I+AT S D L
Sbjct: 143 SEKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 196
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 197 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 256
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 257 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 316
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 317 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 375
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 376 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 432
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 433 ICSVSEDNIMQI 444
Score = 45 (20.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 78 VMTHALQWPSLTVQW 92
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 122 (48.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 65/312 (20%), Positives = 121/312 (38%)
Query: 45 SNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVAT---SGDSLRL- 100
S K E F T + ++ +H + P NP I+AT S D L
Sbjct: 143 SEKGEFGGFGSVTGKIECEIKI--NHEGEVNRARYMPQ----NPHIIATKTPSSDVLVFD 196
Query: 101 WEIHDDRTELKSLLNSN-KTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR---- 155
+ H + + N + + W + + + S D T +WDI+
Sbjct: 197 YTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKE 256
Query: 156 -EILETQLV--AHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+I++ + + H V D++W + +F SV+ D + ++D R S +
Sbjct: 257 GKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHT 316
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ L +N +AT D V + D+R + H+ + + W+P
Sbjct: 317 AEVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETI 375
Query: 271 LCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELCY---QSMAEINVVRWSPLELDWIA 327
L S D R +W++ G + + D PEL + A+I+ W+P E W+
Sbjct: 376 LASSGTDRRLNVWDLSKIGEEQ-SAEDAEDGPPELLFIHGGHTAKISDFSWNPNE-PWV- 432
Query: 328 IAFVNKLQLLKV 339
I V++ ++++
Sbjct: 433 ICSVSEDNIMQI 444
Score = 45 (20.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 78 VMTHALQWPSLTVQW 92
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/145 (24%), Positives = 68/145 (46%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASV 183
+I++ W D + T S D T +WD+ E ++T+ ++ ++ ++D S+ N + +
Sbjct: 253 SISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKTE-ISTNKSIFDASYSNLNRLIVTA 309
Query: 184 SGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF 243
S D ++R++D R + S + + + + W+ + F+ G N+ + D R
Sbjct: 310 SADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTE-EFLFVSGAYDNQNKLWDCRS 368
Query: 244 PTNPVVVLSKHEGSVNGISWA-PLY 267
P P+ L H V I W P Y
Sbjct: 369 PKAPLYDLLGHGEKVLDIDWTNPKY 393
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 119 (46.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 421
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 119 (46.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 421
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 119 (46.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 421
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 119 (46.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 421
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 119 (46.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 421
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 119 (46.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 421
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 119 (46.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 421
Score = 46 (21.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ DR L T + H + V DI + F
Sbjct: 293 SAVRLFPLSG---HMLLSCSMDCKIKLWEVYGDRRCLRT-FIGHGKAVRDICFNNAGTRF 348
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 349 LSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 405
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 406 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 447
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 61/214 (28%), Positives = 100/214 (46%)
Query: 90 IVAT-SGD-SLRLWEI-HDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDT 146
I+AT S D ++L + +DD T + L ++T+ AI S W T +A S D+
Sbjct: 26 ILATGSTDRKIKLVSVKYDDFTLIDVL---DETAH-KKAIRSVAWRPH-TSLLAAGSFDS 80
Query: 147 TCVIW----DIDREILETQLVA----HDREVYDISWGGFNVF-ASVSGDCSVRVFDLRD- 196
T IW DR E L+A H+ EV ++W + A+ S D SV +++ +
Sbjct: 81 TVSIWAKEESADRTF-EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139
Query: 197 -KERSTI-IYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKH 254
+E I + + QD + + W+ ++ +A+ D + D V VL+ H
Sbjct: 140 GEEYECISVLQEHSQD--VKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVAVLNGH 196
Query: 255 EGSVNGISWAPLYGR-RLCSVADDSRALIWEVVG 287
EG+V + G RLCS +DDS +W+ +G
Sbjct: 197 EGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230
Score = 115 (45.5 bits), Expect = 0.00046, P = 0.00046
Identities = 39/139 (28%), Positives = 70/139 (50%)
Query: 69 DHPYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITS 128
+H ++ + PSE L ++ D++R+W+ +DD E ++LN ++ + +SS
Sbjct: 151 EHSQDVKHVIWHPSEALLAS---SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSS---D 204
Query: 129 FDWAGFDTRRVATCSVDTTCVIW-----DIDRE---ILETQLV-AHDREVYDISWGGFNV 179
FD R+ + S D+T +W D D + + E L H R+VY+++WG +
Sbjct: 205 FDKTE-GVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL 263
Query: 180 FASVSGDCSVRVFDLRDKE 198
ASV D + V++ D E
Sbjct: 264 IASVGADGVLAVYEEVDGE 282
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 119 (46.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 53/238 (22%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 154 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 213
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 214 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 273
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 274 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 330
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 331 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 386
Score = 44 (20.5 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 13 TYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 2 THALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 59
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 121 (47.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ H +V +S F S + D S++++D
Sbjct: 109 DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 168
Query: 194 LRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMA-TVGMDSNKVVVLDIRFPTNPVVV 250
+RD R T I +E+ + P A T G D + D+R + ++
Sbjct: 169 VRDSMCRQTFIGHESDINAVAFF--------PNGYAFTTGSDDATCRLFDLR--ADQELL 218
Query: 251 LSKHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
+ H+ + GI+ GR L + DD IW+ + G R+G
Sbjct: 219 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM-KGDRAG 262
>POMBASE|SPAC4F8.11 [details] [associations]
symbol:SPAC4F8.11 "WD repeat protein, human WDR24 family"
species:4896 "Schizosaccharomyces pombe" [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=NAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC4F8.11 GO:GO:0005829 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005778 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 PIR:T38840 RefSeq:NP_593862.1
ProteinModelPortal:O14186 EnsemblFungi:SPAC4F8.11.1 GeneID:2543518
KEGG:spo:SPAC4F8.11 OrthoDB:EOG4RBTST NextBio:20804528
Uniprot:O14186
Length = 846
Score = 127 (49.8 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 51/212 (24%), Positives = 90/212 (42%)
Query: 113 LLNSNKTSEFSSAITSFDW-AGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYD 171
L S +T S W + F + + TCS +WD++ E L H R V+
Sbjct: 82 LQKSTQTKHISC--NDVKWGSSFASNLIFTCSPLGNLNVWDVNLEALLYDFNEHSRAVHK 139
Query: 172 ISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPR-FMAT 228
+ F+ + S D ++++D ++ STI + + + ++ ++P F+A
Sbjct: 140 LDISSFHPSYVLTASQDGLIKLWDYKESS-STITFRGNSEAAR--DVVFSPSEPNEFVAA 196
Query: 229 VGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGP 288
DS + DIRFP P + L+ H G V ++++P G L S D IW+
Sbjct: 197 Y--DSGILQKWDIRFPKLPFLKLAAHNGVVLCVNYSP-NGVFLASCGRDKTIRIWD---- 249
Query: 289 GYRSGNGGPSGDVEPELCYQSMAEINVVRWSP 320
S + + +++ +N VRW P
Sbjct: 250 -------STSNKKKSLITINNVSPLNCVRWRP 274
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 48/197 (24%), Positives = 92/197 (46%)
Query: 86 LNPDI--VAT-SGDS-LRLWEIH-DDRTE--LKSLLNSN-KTSEFS-----SAITSFDWA 132
++PD AT S D+ L++W DD +E K + S +T + + +I++ W
Sbjct: 201 VSPDAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVKESGVRTPKMTLQGHRESISAVQW- 259
Query: 133 GFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVRV 191
D + T S D T +WD+ E ++T+ ++ ++ ++D S+ N + + S D ++R+
Sbjct: 260 -MDATTLVTGSWDHTLKVWDLQLEGIKTE-ISTNKSIFDASYSKLNRLIVTASADKNLRL 317
Query: 192 FDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVL 251
+D R + S + + + + W+ + F+ G + + D R P P+ L
Sbjct: 318 YDARTNQGSVVRNTYLGHNAWVQTVMWSNTE-EFLFVSGSYDTQNKLWDCRSPKAPLYDL 376
Query: 252 SKHEGSVNGISWA-PLY 267
H V I W+ P Y
Sbjct: 377 LGHGEKVLDIDWSNPKY 393
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 48/198 (24%), Positives = 94/198 (47%)
Query: 85 TLNPDIV--AT-SGDS-LRLWEIH-DDRTE--LKSLLNSN-KTSEFS-----SAITSFDW 131
+++PD + AT S D+ L++W DD E K + S +T + + ++++ W
Sbjct: 201 SVSPDGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 132 AGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVR 190
D + T S D T +WD+ E ++T+ ++ ++ ++D S+ N + + S D ++R
Sbjct: 261 --MDATTLLTGSWDHTLKVWDLSLEGIKTE-ISTNKSIFDASYSKLNRLILTASADKNLR 317
Query: 191 VFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVV 250
++D R + S + + + + W+ + F+ G N+ + D R P P+
Sbjct: 318 LYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTE-EFLFVSGAYDNQNKLWDCRSPKAPLYD 376
Query: 251 LSKHEGSVNGISWA-PLY 267
L H V I W+ P Y
Sbjct: 377 LLGHGEKVLDIDWSNPKY 394
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 48/198 (24%), Positives = 94/198 (47%)
Query: 85 TLNPDIV--AT-SGDS-LRLWEIH-DDRTE--LKSLLNSN-KTSEFS-----SAITSFDW 131
+++PD + AT S D+ L++W DD E K + S +T + + ++++ W
Sbjct: 201 SVSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 132 AGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVR 190
D + T S D T +WD+ E ++T+ ++ ++ ++D S+ N + + S D ++R
Sbjct: 261 --MDATTLLTGSWDYTLKVWDLSLEGIKTE-ISTNKSIFDASYSKLNRLILTASADKNLR 317
Query: 191 VFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVV 250
++D R + S + + + + W+ + F+ G N+ + D R P P+
Sbjct: 318 LYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTE-EFLFVSGAYDNQNKLWDCRSPKAPLYD 376
Query: 251 LSKHEGSVNGISWA-PLY 267
L H V I W+ P Y
Sbjct: 377 LLGHGDKVLDIDWSNPKY 394
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 123 (48.4 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 48/198 (24%), Positives = 94/198 (47%)
Query: 85 TLNPDIV--AT-SGDS-LRLWEIH-DDRTE--LKSLLNSN-KTSEFS-----SAITSFDW 131
+++PD + AT S D+ L++W DD E K + S +T + + ++++ W
Sbjct: 201 SVSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQW 260
Query: 132 AGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVR 190
D + T S D T +WD+ E ++T+ ++ ++ ++D S+ N + + S D ++R
Sbjct: 261 --MDATTLLTGSWDYTLKVWDLSLEGIKTE-ISTNKSIFDASYSKLNRLILTASADKNLR 317
Query: 191 VFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVV 250
++D R + S + + + + W+ + F+ G N+ + D R P P+
Sbjct: 318 LYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTE-EFLFVSGAYDNQNKLWDCRSPKAPLYD 376
Query: 251 LSKHEGSVNGISWA-PLY 267
L H V I W+ P Y
Sbjct: 377 LLGHGDKVLDIDWSNPKY 394
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 121 (47.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 48/221 (21%), Positives = 93/221 (42%)
Query: 131 WAGFDTRRVATCSVDTTCVIWDI-----DREILETQLV--AHDREVYDISWGGFN--VFA 181
W + + + S D T +WDI + ++++ + V H V D++W + +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFG 243
Query: 182 SVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI 241
SV+ D + ++D R S + + L +N +AT D V + D+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 242 RFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDV 301
R + H+ + + W+P L S D R +W++ G + + D
Sbjct: 303 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ-SAEDAEDG 361
Query: 302 EPELCY---QSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
PEL + A+I+ W+P E W+ I V++ ++++
Sbjct: 362 PPELLFIHGGHTAKISDFSWNPNE-PWV-ICSVSEDNIMQI 400
Score = 42 (19.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ +WP TV W
Sbjct: 34 VMTHALEWPSLTVQW 48
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 120 (47.3 bits), Expect = 0.00010, P = 0.00010
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 137 RRVATCSVDTTCVIWDID---REILETQLVAHDREVYDISWGG--F-NVFASVSGDCSVR 190
+R+ATCS D T I+D+D L T L H+ V+ +SW F ++ AS S D
Sbjct: 22 KRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEGPVWQVSWAHPKFGSILASCSYDGKAL 81
Query: 191 VF-DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFP-TNPV 248
++ + + ++ +II E+ V + + W + + KV V+D T
Sbjct: 82 IWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSH 141
Query: 249 VVLSKHEGSVNGISWAPL 266
V+ H N +WAP+
Sbjct: 142 VIFDAHAIGANSATWAPV 159
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ H +V +S F S + D S++++D
Sbjct: 153 DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 194 LRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMA-TVGMDSNKVVVLDIRFPTNPVVV 250
+RD R T I +E+ + P A T G D + D+R + ++
Sbjct: 213 VRDSMCRQTFIGHESDINAVAFF--------PNGYAFTTGSDDATCRLFDLR--ADQELL 262
Query: 251 LSKHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
+ H+ + GI+ GR L + DD IW+ + G R+G
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM-KGDRAG 306
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ H +V +S F S + D S++++D
Sbjct: 153 DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 194 LRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMA-TVGMDSNKVVVLDIRFPTNPVVV 250
+RD R T I +E+ + P A T G D + D+R + ++
Sbjct: 213 VRDSMCRQTFIGHESDINAVAFF--------PNGYAFTTGSDDATCRLFDLR--ADQELL 262
Query: 251 LSKHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
+ H+ + GI+ GR L + DD IW+ + G R+G
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM-KGDRAG 306
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ H +V +S F S + D S++++D
Sbjct: 153 DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 194 LRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMA-TVGMDSNKVVVLDIRFPTNPVVV 250
+RD R T I +E+ + P A T G D + D+R + ++
Sbjct: 213 VRDSMCRQTFIGHESDINAVAFF--------PNGYAFTTGSDDATCRLFDLR--ADQELL 262
Query: 251 LSKHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
+ H+ + GI+ GR L + DD IW+ + G R+G
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM-KGDRAG 306
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ H +V +S F S + D S++++D
Sbjct: 153 DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 194 LRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMA-TVGMDSNKVVVLDIRFPTNPVVV 250
+RD R T I +E+ + P A T G D + D+R + ++
Sbjct: 213 VRDSMCRQTFIGHESDINAVAFF--------PNGYAFTTGSDDATCRLFDLR--ADQELL 262
Query: 251 LSKHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
+ H+ + GI+ GR L + DD IW+ + G R+G
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM-KGDRAG 306
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 44/165 (26%), Positives = 72/165 (43%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ H +V +S F S + D S++++D
Sbjct: 153 DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 194 LRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMA-TVGMDSNKVVVLDIRFPTNPVVV 250
+RD R T I +E+ + P A T G D + D+R + ++
Sbjct: 213 VRDSMCRQTFIGHESDINAVAFF--------PNGYAFTTGSDDATCRLFDLR--ADQELL 262
Query: 251 LSKHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
+ H+ + GI+ GR L + DD IW+ + G R+G
Sbjct: 263 MYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAM-KGDRAG 306
>POMBASE|SPBC8D2.20c [details] [associations]
symbol:sec31 "COPII-coated vesicle component Sec31
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:0006998
"nuclear envelope organization" evidence=IMP] [GO:0030127 "COPII
vesicle coat" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC8D2.20c GO:GO:0005829 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006998 GO:GO:0006888 GO:GO:0030127
EMBL:AB004537 eggNOG:NOG248389 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OMA:NQPPPMM OrthoDB:EOG4RR9RS PIR:T40765
RefSeq:NP_595582.1 ProteinModelPortal:O13637 STRING:O13637
EnsemblFungi:SPBC8D2.20c.1 GeneID:2541273 KEGG:spo:SPBC8D2.20c
NextBio:20802385 Uniprot:O13637
Length = 1224
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 75/304 (24%), Positives = 130/304 (42%)
Query: 21 STVAWSVR--HDRKSRLAVGSFLEDYSNK-----IELVNFNPETSD--FSADNRLIFDHP 71
+T+AWS R +D ++ LA+G + +K +EL N NPE+ S D + F
Sbjct: 10 ATLAWSPRGVNDNQALLALGGYTGTEGSKNSDTLLELWNENPESQKPVGSIDVKTRF--- 66
Query: 72 YTPTNIAFFPSEETLNPDIVATSGDS-LRLWE----IHDDRTELKSLLNSNKTSEFSSAI 126
Y ++A+ S + I + D + W+ + D E + + + K SE S +
Sbjct: 67 Y---DLAWEKSLDKPMGVIAGSLEDGGIGFWDPAAILKSD--EASASIATYK-SENGSIL 120
Query: 127 TSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDR--EVYDISWGG--FNVFAS 182
D+ +A+ +WDI L +R EV+ +SW ++ AS
Sbjct: 121 GPLDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQNRSSEVHVVSWNNKVSHILAS 180
Query: 183 VSGDCSVRVFDLRDKERS-TIIYENPV----QDCPLLRLEWNKADPRFMATVGMDSNKVV 237
+ V+D++ K + + Y + + W+ + +AT D+ +
Sbjct: 181 GNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNATRLATAIDDNRNPI 240
Query: 238 VL--DIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV-----VGPGY 290
+L D+R PT P +L+ H+ + +SW P L S D RA++W V +G
Sbjct: 241 ILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLSSGKDGRAMVWNVETGESLGSFP 300
Query: 291 RSGN 294
RSGN
Sbjct: 301 RSGN 304
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 39/149 (26%), Positives = 71/149 (47%)
Query: 143 SVDTTCVIWDI--DREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLRDKER 199
S+D IW++ DR +L T H R + D+S+ F S S D +++++D +
Sbjct: 286 SMDNQIKIWEVYHDRSLLRT-FQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKC 344
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVN 259
+ + +C +++ +K + F+A G +++ DIR P + V H G +N
Sbjct: 345 LNCFNSDRLTNCVKFQVDPDKPN-EFLA--GTADKRILQFDIRSP-DIVQAYDHHLGGIN 400
Query: 260 GISWAPLYGRRLCSVADDSRALIWEVVGP 288
I++ G+R + +DDS WE P
Sbjct: 401 SITFLE-NGKRFVTTSDDSSMRFWEYGTP 428
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 52/238 (21%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ ++++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--TEGSVDPE 421
Score = 50 (22.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R D K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 104 (41.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/162 (25%), Positives = 70/162 (43%)
Query: 112 SLLNSNKTS-EFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDR--EILETQLVAHDRE 168
S++N+ TS E D+ G R+ATCS D + I+D+ +IL L H+
Sbjct: 3 SVINTVDTSHEDMIHDAQMDYYG---TRLATCSSDRSVKIFDVKNGGQILVADLRGHEGP 59
Query: 169 VYDISWGGFNVFASVSGDCSV-RVFDLRDKERSTI--IYENPVQDCPLLRLEWNKADPRF 225
V+ ++W ++ ++ CS R + +E ST +YE D + + W D
Sbjct: 60 VWQVAWA-HPMYGNILASCSYDRKVIIWKEENSTWDKMYEYTGHDSSVNSVCWGPYDFGL 118
Query: 226 MATVGMDSNKVVVLDIRFPTNPVV--VLSKHEGSVNGISWAP 265
+ G + VL + + + + H N +SWAP
Sbjct: 119 ILACGSSDGAISVLTCSGDGHWDIKKINNAHTIGCNAVSWAP 160
Score = 56 (24.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 251 LSKHEGSVNGISWAPLYG---RRLCSVADDSRALIWEVVGP 288
L H V + WAP G + S + D R IW P
Sbjct: 207 LEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVFIWTCDDP 247
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 120 (47.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 47/221 (21%), Positives = 93/221 (42%)
Query: 131 WAGFDTRRVATCSVDTTCVIWDI-----DREILETQLV--AHDREVYDISWGGFN--VFA 181
W + + + S D T +WDI + ++++ + + H V D++W + +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 182 SVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI 241
SV+ D + ++D R S + + L +N +AT D V + D+
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 242 RFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDV 301
R + H+ + + W+P L S D R +W++ G + + D
Sbjct: 303 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ-SAEDAEDG 361
Query: 302 EPELCY---QSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
PEL + A+I+ W+P E W+ I V++ ++++
Sbjct: 362 PPELLFIHGGHTAKISDFSWNPNE-PWV-ICSVSEDNIMQI 400
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ +WP TV W
Sbjct: 34 VMTHALEWPSLTVQW 48
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ DR L T + H + V DI + F
Sbjct: 157 SAVRLFPLSG---HLLLSCSMDCKIKLWEVYGDRRCLRT-FIGHSKAVRDICFNTAGTQF 212
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 213 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 269
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 270 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 311
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ DR L T + H + V DI + F
Sbjct: 160 SAVRLFPLSG---HLLLSCSMDCKIKLWEVYGDRRCLRT-FIGHSKAVRDICFNTAGTQF 215
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 216 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 272
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 273 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 314
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 47/156 (30%), Positives = 76/156 (48%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVFA-SVSGDCSVRVFD 193
D T S DTT +WD+ L+T L H V D++ + + SVS D +V+ +D
Sbjct: 151 DNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWD 210
Query: 194 LRDKERSTII--YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVL-DIRFPTNPVVV 250
L E++ II Y + + + D +AT G DS V+ L D+R PV+
Sbjct: 211 L---EKNQIIRDYYGHLSGVRTVSIH-PTLD--LIATAGRDS--VIKLWDMRTRI-PVIT 261
Query: 251 LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVV 286
L H+G +N + P+ ++ S + D+ +W+VV
Sbjct: 262 LVGHKGPINQVQCTPV-DPQVVSSSTDATVRLWDVV 296
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 52/205 (25%), Positives = 84/205 (40%)
Query: 89 DIVAT-SGD-SLRLWEIHDDRTELKSLLNSNKT---SEFSSAITSFDWAG-FDTRRVATC 142
DI AT SGD SL++W D + L E + + S DW ++ + +
Sbjct: 84 DIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSG 143
Query: 143 SVDTTCVIWDIDREILETQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERS 200
S D T +WD +R+ T V H+ +Y + N+FASVS D + +++ D
Sbjct: 144 SWDCTLKLWDCNRQNSITTFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGK 203
Query: 201 TIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNG 260
++ L +W+ D + T G D + D+R V L E +V
Sbjct: 204 PLM-SIEAHASEALCCDWSHFDRNVLVTGGSDG-LIRGWDLRKMRTHVFELYSGEFAVRR 261
Query: 261 ISWAPLYGRRLCSVADDSRALIWEV 285
++ +P L S D IW +
Sbjct: 262 LACSPHSAAVLASANYDFTTRIWNL 286
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 58/238 (24%), Positives = 103/238 (43%)
Query: 52 NFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTEL 110
N TS A L+ HP + F P+ TL I + S D + LW +H D
Sbjct: 34 NGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAG-TL---IASGSHDREIFLWRVHGDCKNF 89
Query: 111 KSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVY 170
+L +K +AI W D ++ + S D T WD++ ++ H V
Sbjct: 90 M-VLKGHK-----NAILDLHWTS-DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN 142
Query: 171 DI--SWGGFNVFASVSGDCSVRVFDLRDKERSTI-IYENPVQDCPLLRLEWNKADPRFMA 227
+ G + S S D + +++D+R +R I + + Q + + ++ A +
Sbjct: 143 SCCPTRRGPPLIISGSDDGTAKLWDMR--QRGAIQTFPDKYQ---ITAVSFSDAADKIF- 196
Query: 228 TVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
T G+D N V V D+R + L H+ ++ G+S +P G L + D++ +W++
Sbjct: 197 TGGVD-NDVKVWDLR-KGEATMTLEGHQDTITGMSLSP-DGSYLLTNGMDNKLCVWDM 251
>UNIPROTKB|B4KKN1 [details] [associations]
symbol:GI17814 "Ribosome biogenesis protein WDR12 homolog"
species:7230 "Drosophila mojavensis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH933807
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002003253.1
ProteinModelPortal:B4KKN1 EnsemblMetazoa:FBtr0168539 GeneID:6577286
KEGG:dmo:Dmoj_GI17814 FlyBase:FBgn0140555 InParanoid:B4KKN1
Uniprot:B4KKN1
Length = 419
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 47/197 (23%), Positives = 93/197 (47%)
Query: 86 LNPDI--VAT-SGDS-LRLW--EIHD--DRTELKSLLNSNKTSEFS-----SAITSFDWA 132
++PD AT S D+ L++W E+ D + T ++ + +T + +I++ W
Sbjct: 201 VSPDAQRFATGSWDTMLKIWSAELEDAGESTAKRAKESGVRTPRMTLQGHRESISAVQW- 259
Query: 133 GFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVRV 191
D + T S D T +WD++ E ++T+ ++ ++ ++D S N + + S D ++R+
Sbjct: 260 -MDNNTLLTGSWDHTLKVWDLNLEGIKTE-ISTNKSIFDASHSKLNNLIVTASADKNLRL 317
Query: 192 FDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVL 251
+D R + S + + + + W+ + F+ G N+ + D R P P+ L
Sbjct: 318 YDARTNQGSVVRSTYLGHNAWVQTVMWSITE-EFLFVSGAYDNQNKLWDCRSPKAPLYDL 376
Query: 252 SKHEGSVNGISWA-PLY 267
H V I W+ P Y
Sbjct: 377 LGHGEKVLDIDWSNPKY 393
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 44/178 (24%), Positives = 81/178 (45%)
Query: 92 ATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIW 151
A G S R+ E RT K L ++ S +++ W D + T S D T +W
Sbjct: 228 AAEGSSKRMKE-SGVRTP-KITLQGHRES-----VSAVQW--MDASTLLTGSWDHTLKVW 278
Query: 152 DIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
D+ E ++T+ ++ ++ ++D S+ N + + S D ++R++D R + S + +
Sbjct: 279 DLSLEGIKTE-ISTNKSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHN 337
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWA-PLY 267
+ + W+ + F+ G N+ + D R P P+ L H V I W+ P Y
Sbjct: 338 AWVQTVMWSTTE-EFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKY 394
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 44/178 (24%), Positives = 81/178 (45%)
Query: 92 ATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIW 151
A G S R+ E RT K L ++ S +++ W D + T S D T +W
Sbjct: 228 AVEGSSKRMKE-SGVRTP-KITLQGHRES-----VSAVQW--MDASTLLTGSWDHTLKVW 278
Query: 152 DIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
D+ E ++T+ ++ ++ ++D S+ N + + S D ++R++D R + S + +
Sbjct: 279 DLSLEGIKTE-ISTNKSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHN 337
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWA-PLY 267
+ + W+ + F+ G N+ + D R P P+ L H V I W+ P Y
Sbjct: 338 AWVQTVMWSTTE-EFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKY 394
>RGD|620477 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10116 "Rattus
norvegicus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IEA;ISO;ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA;ISO] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=IEA;ISO;ISS] [GO:0040020 "regulation
of meiosis" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050773 "regulation of dendrite development"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity"
evidence=IEA;ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 RGD:620477
GO:GO:0005813 GO:GO:0048471 GO:GO:0043234 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0005680 GO:GO:0050773 GO:GO:0000922 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363
CTD:991 HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
EMBL:U05341 EMBL:AF052695 EMBL:BC085691 IPI:IPI00382084 PIR:B56021
RefSeq:NP_741990.1 UniGene:Rn.9262 ProteinModelPortal:Q62623
IntAct:Q62623 STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623
GeneID:64515 KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623
NextBio:613310 ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 48/201 (23%), Positives = 88/201 (43%)
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDR-EILET-QLVAHDREVYDISW-GGFNVFASVSGD 186
DW+ + VA +D + +W+ +IL+ Q+ + ++W N A + +
Sbjct: 191 DWSSGNVLAVA---LDNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGNYLAVGTSN 247
Query: 187 CSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN 246
V+++D++ ++R + + + + L WN ++ + G S + D+R +
Sbjct: 248 AEVQLWDVQQQKRLRNMTSHSAR---VSSLSWNS----YILSSGSRSGHIHHHDVRVAEH 300
Query: 247 PVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELC 306
V LS H V G+ WAP GR L S +D+ +W GPG SG V +
Sbjct: 301 HVATLSGHSQEVCGLRWAP-DGRHLASGGNDNIVNVWPS-GPG-------ESGWVPLQTF 351
Query: 307 YQSMAEINVVRWSPLELDWIA 327
Q + V W P + + +A
Sbjct: 352 TQHQGAVKAVAWCPWQSNILA 372
>UNIPROTKB|Q62623 [details] [associations]
symbol:Cdc20 "Cell division cycle protein 20 homolog"
species:10116 "Rattus norvegicus" [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 RGD:620477 GO:GO:0005813 GO:GO:0048471
GO:GO:0043234 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
eggNOG:COG2319 GO:GO:0016567 GO:GO:0005680 GO:GO:0050773
GO:GO:0000922 GO:GO:0031145 GO:GO:0090129 GO:GO:0031915
GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OrthoDB:EOG4CC414 EMBL:U05341 EMBL:AF052695
EMBL:BC085691 IPI:IPI00382084 PIR:B56021 RefSeq:NP_741990.1
UniGene:Rn.9262 ProteinModelPortal:Q62623 IntAct:Q62623
STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623 GeneID:64515
KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623 NextBio:613310
ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 48/201 (23%), Positives = 88/201 (43%)
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDR-EILET-QLVAHDREVYDISW-GGFNVFASVSGD 186
DW+ + VA +D + +W+ +IL+ Q+ + ++W N A + +
Sbjct: 191 DWSSGNVLAVA---LDNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGNYLAVGTSN 247
Query: 187 CSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN 246
V+++D++ ++R + + + + L WN ++ + G S + D+R +
Sbjct: 248 AEVQLWDVQQQKRLRNMTSHSAR---VSSLSWNS----YILSSGSRSGHIHHHDVRVAEH 300
Query: 247 PVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELC 306
V LS H V G+ WAP GR L S +D+ +W GPG SG V +
Sbjct: 301 HVATLSGHSQEVCGLRWAP-DGRHLASGGNDNIVNVWPS-GPG-------ESGWVPLQTF 351
Query: 307 YQSMAEINVVRWSPLELDWIA 327
Q + V W P + + +A
Sbjct: 352 TQHQGAVKAVAWCPWQSNILA 372
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 112 (44.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 52/238 (21%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ ++++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--TEGGVDPE 421
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R D K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 112 (44.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 52/238 (21%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ ++++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--TEGGVDPE 421
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/60 (26%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R D K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 56/212 (26%), Positives = 88/212 (41%)
Query: 87 NP--DIVAT-SGDSL-RLWEIHDDR----TEL--KSLLNSNKTSEFSSA-ITSFDWAGFD 135
NP D++A+ SGDS R+W ++++ T+L + + S+ +TS DW D
Sbjct: 188 NPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGWHDVPSNKDVTSLDWNS-D 246
Query: 136 TRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDL 194
+A S D IW + + T L H ++ + W N S D + ++D
Sbjct: 247 GTLLAMGSYDGFARIWTENGNLAST-LGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDA 305
Query: 195 RDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN-PVVVLSK 253
E + P P L ++W + F A+ G D + + R + PV
Sbjct: 306 HTGEAKQ---QFPFHSAPALDVDWQN-NTTF-ASCGTD---MCIHVCRLGCDLPVKTFQG 357
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
H VN I W P G L S +DD IW +
Sbjct: 358 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM 388
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 37/137 (27%), Positives = 67/137 (48%)
Query: 137 RRVATCSVDTTCVIWDIDRE---ILETQLVAHDREVYDISWGG--FN-VFASVSGDCSVR 190
+R+ATCS D T I++++ E +++T L H+ V+ + W F + AS S D V
Sbjct: 22 KRLATCSSDKTIKIFEVEGETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80
Query: 191 VFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF--PTNPV 248
++ + R + I + V + ++W + + V KV V++ + T+P+
Sbjct: 81 IWK-EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI 139
Query: 249 VVLSKHEGSVNGISWAP 265
++ H VN SWAP
Sbjct: 140 II-DAHAIGVNSASWAP 155
>MGI|MGI:2442115 [details] [associations]
symbol:Wdr59 "WD repeat domain 59" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
MGI:MGI:2442115 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00650000093352
OMA:TGGWNIA CTD:79726 HOVERGEN:HBG092820 EMBL:EF011622
EMBL:AK173301 EMBL:AK030644 EMBL:AK040807 EMBL:AK052262
EMBL:AK136303 EMBL:AK170910 EMBL:BC066082 IPI:IPI00263940
IPI:IPI00469939 IPI:IPI00955111 RefSeq:NP_001164213.1
RefSeq:NP_001164214.1 RefSeq:NP_795897.2 UniGene:Mm.247294
ProteinModelPortal:Q8C0M0 SMR:Q8C0M0 PhosphoSite:Q8C0M0
PRIDE:Q8C0M0 Ensembl:ENSMUST00000038193 GeneID:319481
KEGG:mmu:319481 UCSC:uc009nmi.2 UCSC:uc009nmj.2 NextBio:394820
Bgee:Q8C0M0 CleanEx:MM_WDR59 Genevestigator:Q8C0M0 Uniprot:Q8C0M0
Length = 992
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 160 TQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLE 217
T L H R + D+ W F ++ + S D + ++D++D + T+ + V +++
Sbjct: 99 TTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVAL-SAVAGAS--QVK 155
Query: 218 WNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADD 277
WNK + ++AT D + V + D R P+ V L+ H ++G+ W P + + D
Sbjct: 156 WNKKNANYLAT-SHDGD-VRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHIFATSSQD 213
Query: 278 SRALIWEVVGP 288
+ W+ P
Sbjct: 214 NSVKFWDYRQP 224
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ DR L T + H + V DI + F
Sbjct: 292 SAVRLFPLSG---HLLLSCSMDCKIKLWEVYGDRRCLRT-FIGHSKAVRDICFNTAGTQF 347
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 348 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 404
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 405 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 446
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ DR L T + H + V DI + F
Sbjct: 292 SAVRLFPLSG---HLLLSCSMDCKIKLWEVYGDRRCLRT-FIGHSKAVRDICFNTAGTQF 347
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 348 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 404
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 405 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 446
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ DR L T + H + V DI + F
Sbjct: 292 SAVRLFPLSG---HLLLSCSMDCKIKLWEVYGDRRCLRT-FIGHSKAVRDICFNTAGTQF 347
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 348 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 404
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 405 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 446
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 58/239 (24%), Positives = 104/239 (43%)
Query: 50 LVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRT 108
LV P TS +A + H + F P+ + I + S D S+ LW + +
Sbjct: 45 LVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQ----HIASGSMDRSILLWNTYG-QC 99
Query: 109 ELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDRE 168
E +L+ +K AI W+ D++ + + S D T WDI+ + + H+
Sbjct: 100 ENYGILSGHK-----GAILDLQWSR-DSKTIFSASADMTLASWDIESGQRIRRYIGHEEV 153
Query: 169 V--YDISWGGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFM 226
+ +IS G + S S D ++ ++D R KE I Y + P+ + ++A
Sbjct: 154 INSVEISKRGQEMLVSASDDGTMGIWDPRQKE--AIDYLET--ELPITAVAQSEAGNEVF 209
Query: 227 ATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
+ G+D N + V DIR V ++ H ++ + +P + L S + DS W++
Sbjct: 210 SG-GID-NAIHVWDIRKKAI-VYSMAGHMDTITSLEVSP-DSQTLLSNSFDSTVRTWDI 264
>POMBASE|SPBC1A4.07c [details] [associations]
symbol:SPBC1A4.07c "U3 snoRNP-associated protein Sof1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1A4.07c GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000210082 KO:K11806 OMA:CASDRSI InterPro:IPR007287
Pfam:PF04158 PIR:T39855 RefSeq:NP_595809.1
ProteinModelPortal:O74340 STRING:O74340 EnsemblFungi:SPBC1A4.07c.1
GeneID:2540796 KEGG:spo:SPBC1A4.07c OrthoDB:EOG4GXJWG
NextBio:20801914 Uniprot:O74340
Length = 436
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 41/197 (20%), Positives = 96/197 (48%)
Query: 89 DIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTC 148
D+ ATSG+++ +W+ D K ++ + + F++ +T +A+ +D +
Sbjct: 160 DLFATSGENVSIWDYSRDTPVTKFEWGAD-----TLPVVKFNYT--ETSVLASAGMDRSI 212
Query: 149 VIWDIDREILETQLVAHDREVYDISWGGFNVFASVSG--DCSVRVFDLRDKERSTIIYEN 206
VI+D+ T+L+ R ISW F V+G D ++ ++D+R+ +R+ +Y++
Sbjct: 213 VIYDLRTSSPLTKLITKLR-TNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKRALHVYKD 271
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPL 266
V ++ ++++ F++ G + + ++R + V +K V + ++ +
Sbjct: 272 HVS--AVMSVDFSPTGQEFVS--GSYDKTIRIYNVREGHSRDVYHTKRMQRVTAVKFS-M 326
Query: 267 YGRRLCSVADDSRALIW 283
+ + S +DDS +W
Sbjct: 327 DAQYIFSGSDDSNVRLW 343
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 33/131 (25%), Positives = 62/131 (47%)
Query: 160 TQLVAHDREVYDISWGGF--NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLE 217
T L H R + D+ W F ++ + S D + ++D++D + T+ + V +++
Sbjct: 99 TTLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVAL-SAVAGAS--QVK 155
Query: 218 WNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADD 277
WNK + +AT D + V + D R P+ V L+ H ++G+ W P L + + D
Sbjct: 156 WNKKNANCLAT-SHDGD-VRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHILATSSQD 213
Query: 278 SRALIWEVVGP 288
+ W+ P
Sbjct: 214 NSVKFWDYRQP 224
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 42/163 (25%), Positives = 70/163 (42%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ T H +V +S F S + D S +++D
Sbjct: 153 DDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWD 212
Query: 194 LRDKE-RSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
+RD R + + V D + N + G D + D+R + ++L
Sbjct: 213 IRDGMCRQS--FTGHVSDINAVSFFPNG----YAFATGSDDATCRLFDLR--ADQELLLY 264
Query: 253 KHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
H+ + GI+ GR L + DD +W+ + G R+G
Sbjct: 265 SHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTL-KGDRAG 306
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 58/234 (24%), Positives = 97/234 (41%)
Query: 61 SADNRLIFDHPYTPTNIAFFPSEET-LNPDIVATSGDSLRLWEIHDDRT--ELKSLLNSN 117
S D +LI YT + P + + A SG+ + + + + LKS +
Sbjct: 74 SQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNV 133
Query: 118 KTSEFSSAITSF-DWAGF-DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG 175
K S SA T + F D + T S DTTC +WDI+ +T V H + ++
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVS 193
Query: 176 -GFNVFASVSGDCSVRVFDLRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMATVGMD 232
F +F S + D S +++D+R+ R T +E+ + + + T G D
Sbjct: 194 PDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFF------PNGEAICT-GSD 246
Query: 233 SNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAP--LYGRRLCSVADDSRALIWE 284
+ D+R + + HE + GI+ L GR L + DD +W+
Sbjct: 247 DASCRLFDLR--ADQELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 44/163 (26%), Positives = 74/163 (45%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ T H +V +S F S + D S +++D
Sbjct: 153 DDGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWD 212
Query: 194 LRDKE-RSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
+RD R + + + D + + + + F AT G D + D+R + ++L
Sbjct: 213 IRDGMCRQS--FTGHISD--INAVSFFPSGYAF-AT-GSDDATCRLFDLR--ADQELLLY 264
Query: 253 KHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
H+ + GI+ GR L + DD +W+ + G RSG
Sbjct: 265 SHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGG-RSG 306
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 45/165 (27%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ DR L T + H + V DI + F
Sbjct: 376 SAVRLFPLSG---HLLLSCSMDCKIKLWEVYGDRRCLRT-FIGHSKAVRDICFNTAGTQF 431
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 432 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 488
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 489 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 530
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 52/218 (23%), Positives = 100/218 (45%)
Query: 80 FPSEETLNPDIVATSG-D-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTR 137
F +E +++ +SG D + +W++++D + ++ S S A+ + D
Sbjct: 59 FTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAM------SGHSGAVMEAHFTP-DGS 111
Query: 138 RVATCSVDTTCVIWDIDREILETQLVAHDREVYDI--SWGGFNVFASVSGDCSVRVFDLR 195
+ TCS D T WDI + + H V + S G + S S D +++++D R
Sbjct: 112 HIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR 171
Query: 196 DKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHE 255
K + + E+P Q + + + + ++ G+D N+V + DIR + L H
Sbjct: 172 KKHAAHTL-ESPFQ---VTAVCFGDTGEQVISG-GID-NEVKIWDIRKQA-VLHHLRGHS 224
Query: 256 GSVNGISWAPLYGRRLCSVADDSRALIWEV--VGPGYR 291
++ G+S +P G + + A D+ +W+V PG R
Sbjct: 225 DTITGMSLSP-EGDFILTNAMDNTLRVWDVRPYAPGER 261
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 40/166 (24%), Positives = 72/166 (43%)
Query: 123 SSAITSFDWAGFDTRRVATCSVDTTCVIWDI-DREILETQLVAHDREVYDISWGGFNV-F 180
+ + W +CS+DT +W++ DR+ + H V ++++ F
Sbjct: 275 NKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEF 334
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPR-FMATVGMDSNKVVVL 239
S S D V+++D + + V C L+++ D + M VGM + K++
Sbjct: 335 LSASFDRYVKLWDTETGQVKQRFHTGHVPYC----LKYHPDDDKNHMFLVGMQNKKIIQW 390
Query: 240 DIRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
D R + +V +H +VN I++ RR S +DD IWE
Sbjct: 391 DSR--SGEIVQEYDRHLQAVNSITFFDK-NRRFASTSDDKSVRIWE 433
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 40/164 (24%), Positives = 78/164 (47%)
Query: 131 WA-GFDTRRVATCSVDTTCVIWDIDREILE-TQLVAHDREVYDISWGGFNVFASVSG--D 186
W+ G + +AT + V++D+ R LE + H R+V+ +++ +SG D
Sbjct: 156 WSHGLYDQIIATAVANGRIVVYDLHRTGLEYCRFQGHSRQVHRLAFNPHQPAWLLSGSQD 215
Query: 187 CSVRVFDLRD--KERSTIIYENPVQ---DCPLLR-LEWNKADPRFMATVGMDSNKVVVLD 240
+R++DLR +R + + Q + +R + W+ D A V DS + + D
Sbjct: 216 AHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAVRDVRWSPGDGVLFA-VATDSGAIQLWD 274
Query: 241 IRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR ++P++ ++ H+ + W P G+ + S D + +WE
Sbjct: 275 IRKSSSPILRITAHDRPCYSVDWHP-DGKHIVSGGTDRQVKVWE 317
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 43/166 (25%), Positives = 76/166 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SAI F +G + +CS+D +W++ +R + T + H + V D+ + F
Sbjct: 291 SAIRLFPKSG---HLLLSCSMDCKIKLWEVYNERRCVRT-FIGHSKAVRDVCFNNSGTQF 346
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNK-ADPRFMATVGMDSNKVVVL 239
S + D ++++D + + V C +++N D + + GM K+V
Sbjct: 347 LSAAYDRYIKLWDSETGQCISRFTNRKVPYC----VKFNPDEDKQNLLVAGMSDKKIVQW 402
Query: 240 DIRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
DIR + VV +H G+VN I++ RR S +DD +WE
Sbjct: 403 DIR--SGEVVQEYDRHLGAVNTITFVD-ENRRFVSTSDDKSLRVWE 445
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 33/141 (23%), Positives = 65/141 (46%)
Query: 126 ITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVS 184
I+ W D + T S D T IWD+ +++++ H + +D+S+ N + + S
Sbjct: 265 ISGVQW--IDDNTLVTSSWDHTIKIWDLALSGIKSEICGH-KSFFDLSYSHLNGLIIAAS 321
Query: 185 GDCSVRVFDLRDKERSTIIYENPVQDCPLLR-LEWNKADPRFMATVGMDSNKVVVLDIRF 243
D ++R++D + + TI+ + ++ + W+ + ++ G N V + D R
Sbjct: 322 PDKNLRLYDPKSNQ-GTIVKNTYLGHTQWVQSVRWSTTN-EYLFVSGAYDNHVKLWDYRS 379
Query: 244 PTNPVVVLSKHEGSVNGISWA 264
P P+ L HE V W+
Sbjct: 380 PKAPIFELIGHEDKVLACDWS 400
>SGD|S000002535 [details] [associations]
symbol:MTC5 "Subunit of the SEA (Seh1-associated) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000329 "fungal-type
vacuole membrane" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IDA] [GO:0097042 "extrinsic to
fungal-type vacuolar membrane" evidence=IDA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
SGD:S000002535 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319 EMBL:BK006938
EMBL:Z48179 GO:GO:0097042 GO:GO:0035859
GeneTree:ENSGT00650000093352 OMA:INPSGRD OrthoDB:EOG43BQX2
PIR:S51855 RefSeq:NP_010413.3 RefSeq:NP_010417.3
ProteinModelPortal:Q03897 SMR:Q03897 DIP:DIP-1825N IntAct:Q03897
MINT:MINT-402415 STRING:Q03897 PaxDb:Q03897 PeptideAtlas:Q03897
EnsemblFungi:YDR128W GeneID:851706 GeneID:851710 KEGG:sce:YDR128W
KEGG:sce:YDR132C CYGD:YDR128w NextBio:969389 Genevestigator:Q03897
GermOnline:YDR128W Uniprot:Q03897
Length = 1148
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 48/209 (22%), Positives = 84/209 (40%)
Query: 85 TLNP---DIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVAT 141
++NP DIV S L + ++ D T + L + + W+ +
Sbjct: 31 SINPSGRDIVLASRQGLYIIDLDDPFTPPRWLHHITPWQ-----VADVQWSPHPAKPYWI 85
Query: 142 CSVDTT-CVIWDIDRE---ILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLR 195
S +IW++ + +E L H R + DI++ + V A+ S D V +D+R
Sbjct: 86 VSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMR 145
Query: 196 DKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHE 255
R Y +++WN DP +A+ N + V D+R + P+ L H
Sbjct: 146 SPHRP--FYSTSSWRSAASQVKWNYKDPNVLAS--SHGNDIFVWDLRKGSTPLCSLKGHV 201
Query: 256 GSVNGISWAPLYGRRLCSVADDSRALIWE 284
SVN I + + S ++D W+
Sbjct: 202 SSVNSIDFNRFKYSEIMSSSNDGTVKFWD 230
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 117 (46.2 bits), Expect = 0.00028, P = 0.00028
Identities = 54/231 (23%), Positives = 96/231 (41%)
Query: 70 HPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSL-LNSNKTSEFSSAIT 127
H Y ++A+ S TL + S D S+ +W++ DD + + L +NS + +
Sbjct: 114 HTYEVKSVAW-DSTGTL---LATCSRDKSIWIWQMEDDN-DFECLSINSGHGQDIKCVL- 167
Query: 128 SFDWAGFDTRRVATCSVDTTCVIW-DIDR--EILETQLVAHDREVYDISWGGFNVFASVS 184
W + +A+ S D T W DID E + T L H+ ++D+++
Sbjct: 168 ---WHP-NEELLASSSYDDTIKFWKDIDGDWECINT-LTGHESSIWDLAFNKDGDKLVSC 222
Query: 185 GDCSVRVFDLRDKERSTII----YENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
G+ + +F DKE I ++N P+ ++W+ + G + ++ +
Sbjct: 223 GEDKLVLFWKFDKENEKWINIFKFKNE-NSRPIYSIDWSSLTNTIVT--GSADDSIIFYE 279
Query: 241 IRFPTNP---VVVLSK---HEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
P ++L K H+ VN W P + L S DD IWE+
Sbjct: 280 QESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWEL 330
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 58/234 (24%), Positives = 97/234 (41%)
Query: 61 SADNRLIFDHPYTPTNIAFFPSEET-LNPDIVATSGDSLRLWEIHDDRT--ELKSLLNSN 117
S D +LI YT + P + + A SG+ + + + + LKS +
Sbjct: 74 SQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNV 133
Query: 118 KTSEFSSAITSF-DWAGF-DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG 175
K S SA T + F D + T S DTTC +WDI+ +T V H + ++
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVS 193
Query: 176 -GFNVFASVSGDCSVRVFDLRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMATVGMD 232
F +F S + D S +++D+R+ R T +E+ + + + T G D
Sbjct: 194 PDFRLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFF------PNGEAICT-GSD 246
Query: 233 SNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAP--LYGRRLCSVADDSRALIWE 284
+ D+R + + HE + GI+ L GR L + DD +W+
Sbjct: 247 DASCRLFDLR--ADQELTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
>FB|FBgn0033339 [details] [associations]
symbol:sec31 "sec31" species:7227 "Drosophila melanogaster"
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0030134 "ER to
Golgi transport vesicle" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005795 "Golgi stack" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005783 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005795 GO:GO:0030134 eggNOG:NOG248389 KO:K14005
GeneTree:ENSGT00390000003175 OMA:PSASNAY RefSeq:NP_724716.1
UniGene:Dm.30896 ProteinModelPortal:A1Z7J6 SMR:A1Z7J6 STRING:A1Z7J6
PaxDb:A1Z7J6 PRIDE:A1Z7J6 EnsemblMetazoa:FBtr0088643 GeneID:35877
KEGG:dme:Dmel_CG8266 UCSC:CG8266-RB CTD:35877 FlyBase:FBgn0033339
InParanoid:A1Z7J6 OrthoDB:EOG44QRFZ PhylomeDB:A1Z7J6
GenomeRNAi:35877 NextBio:795601 Bgee:A1Z7J6 Uniprot:A1Z7J6
Length = 1241
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 59/275 (21%), Positives = 111/275 (40%)
Query: 23 VAWSVRHDRKSRLAVGSFLEDYSNKIE--LVNFNPETSD--FSADNRLIFDHPYTPTNIA 78
+AWS ++ LA G+ + + + L ++P SD + + R Y +
Sbjct: 12 IAWSPAQQQQILLAAGTAAQQFDSNANSTLELYSPNFSDATYDLELRASVSSQYKFQKLI 71
Query: 79 FFPSEETLNPDIVA-TSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTR 137
+ P + IV + ++ D K + + + A++ D+ F
Sbjct: 72 WSPVGPHPSGLIVGGCEAGQINIYSA-DKLLAGKEEPLLKRQDKHTGAVSGLDFNPFQNN 130
Query: 138 RVATCSVDTTCVIWDIDREILETQLVAHDR-----EVYDISWGGF--NVFASVSGDCSVR 190
+A+C+ ++ +IWD++ ET + + +V +++W ++ ASV V
Sbjct: 131 LLASCASESEILIWDLNNP--ETSMSPGTKTQPLEDVKNVAWNRQVQHILASVFSTRCV- 187
Query: 191 VFDLRDKERSTIIYENPVQDCPLLRLEWN-KADPRFMATVGMDSNKVVVL-DIRFPTNPV 248
++DLR K + I + +EW+ +A + D VV L D+R+ T P
Sbjct: 188 IWDLR-KSQQIIKLSDSQSRVRWHAIEWHPEAATQVWLASEDDQAPVVQLWDLRYATAPA 246
Query: 249 VVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIW 283
HE V G+SW + S D+R W
Sbjct: 247 KTYQIHERGVLGMSWCLQDNDLMVSCGKDNRIYCW 281
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 113 (44.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 52/238 (21%), Positives = 108/238 (45%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
L+ +++ S D ++ LW+I E K + + ++ + W + +
Sbjct: 189 LSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVAD 248
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 249 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 308
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 309 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 365
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ + + P G V+PE
Sbjct: 366 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN--INNDEDPEGSVDPE 421
Score = 46 (21.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W R + K RL +G+ D N + + + D D
Sbjct: 35 VMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFD 94
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 36/164 (21%), Positives = 72/164 (43%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVFASV 183
S ++ W + +A+ + +WD+ + H++ + + + V
Sbjct: 421 SKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLV 480
Query: 184 SG--DCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI 241
SG DC V+V+ R +E S I + C + ++N ++A VG + + D+
Sbjct: 481 SGSDDCKVKVWCTR-QEASVINIDMKANICCV---KYNPGSSNYIA-VGSADHHIHYYDL 535
Query: 242 RFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
R + P+ V S H+ +V+ + + L L S + DS +W+V
Sbjct: 536 RNISQPLHVFSGHKKAVSYVKF--LSNNELASASTDSTLRLWDV 577
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 38/151 (25%), Positives = 71/151 (47%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG--GFNVFASVSGDCSVRVF 192
D T +D+ +WD+ L H +E+Y I++ GF+V A+ SGD + +V+
Sbjct: 361 DGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHV-ATGSGDNACKVW 419
Query: 193 DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
DLR + IY P + +++ D ++ T D+ + + +P+ L+
Sbjct: 420 DLRQRR---CIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGW--SPLKTLA 474
Query: 253 KHEGSVNGISWAPLYGRRLCSVADDSRALIW 283
HEG V G+ +P G+ + + + D +W
Sbjct: 475 GHEGKVMGVDLSP-DGQLIATCSYDRTFKLW 504
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 52/215 (24%), Positives = 100/215 (46%)
Query: 75 TNIAFFPSEETLNPD-IVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWA 132
T+IA P NPD I+++S D ++ +W++ T+ S ++++ + S
Sbjct: 25 TSIAVSPE----NPDTIISSSRDKTVMVWQLTP--TDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 133 GFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVRV 191
D + + S D T +WDI + + H ++V +++ N S S D +++V
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 192 FDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIR-FPTNPVVV 250
++ + + T+ QD + + ++ P ++ G NKV + DI+ F N
Sbjct: 139 WNTLGECKFTLEGPEAHQDW-VSCIRFSPNTPTIVS--GSWDNKVKIWDIKSFKCNHT-- 193
Query: 251 LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
L+ H G VN ++ +P G S D+ A +WE+
Sbjct: 194 LTDHTGYVNTVTISP-DGSLCASGGKDTFACLWEL 227
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 50/216 (23%), Positives = 101/216 (46%)
Query: 86 LNPDI--VATSGDSL-RLWEIHDDR-TELKSLLNSNKTSEFSSAITSFDWAGFDTRRVAT 141
LN D +A +G SL +++ I+ + TE ++ N+ +S+ W+ D+ +AT
Sbjct: 26 LNKDNNQIALAGRSLLKVYSINSNGFTESCNMRGKNQNLSYSA--NDVAWSTLDSNLLAT 83
Query: 142 CSVDTTCVIWDIDREILETQLVA---HDREVYDISWGGF--NVFASVSGDCSVRVFDLR- 195
+ + +WD+ + + QL+ H+R + +++ N+ S S D +++ FD+R
Sbjct: 84 AATNGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRS 143
Query: 196 DKERSTIIYENP-VQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKH 254
DK +T + V+D ++++ + V ++ V + D+R +V + H
Sbjct: 144 DKSINTYFCNSESVRD-----VKFSPHTQNIFSAVS-ENGTVQLWDMRKWDKCMVQFTAH 197
Query: 255 EGSVNGISWAPLYGRRLCSVADDSRALIWEVVG-PG 289
G V W P L + + D + +W + G PG
Sbjct: 198 YGPVYTCDWHPTRNW-LATGSRDKQIKVWNMDGRPG 232
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 93 (37.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 26/125 (20%), Positives = 54/125 (43%)
Query: 162 LVAHDREVYDISWGGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKA 221
L H V + W + S S D +++++D+ + + N V +C + ++
Sbjct: 253 LSGHSEAVSSVLWSDVDEICSASWDHNIKIWDVETGTVKSTLAGNKVFNC----ISYSPL 308
Query: 222 DPRFMATVGMDSNKVVVLDIRFPTNPVVV--LSKHEGSVNGISWAPLYGRRLCSVADDSR 279
R + G + + D R +V+ L+ H G V + W+P + ++L S + D
Sbjct: 309 SQRLAS--GSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKL 366
Query: 280 ALIWE 284
+W+
Sbjct: 367 VKLWD 371
Score = 67 (28.6 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 139 VATCSVDTTCVIWDIDREILETQLVAHDREVYDISW 174
+ T S D TC IW ++ + + T + H V D++W
Sbjct: 114 ILTGSYDKTCRIWSLEGKTIMT-ITGHTEAVKDVTW 148
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 58/261 (22%), Positives = 107/261 (40%)
Query: 41 LEDYSNKIELVNFNPETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGDS-LR 99
++D+S ++ L P S + F H N A F + T+ I +S +R
Sbjct: 297 VKDWSKRLHL---GPRAS-LPSVCMYTFHHTNNNMNCAEFSPDSTM---IACGFQESYIR 349
Query: 100 LWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAG------F--DTRRVATCSVDTTCVIW 151
LW I D+ KSL S + ++ +G F D + + +CS D + +W
Sbjct: 350 LWSIKADK---KSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLW 406
Query: 152 DIDREILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDLRDKERSTIIYENPVQD 210
+D + H V+D+++G F + FA+ S D + +++ D ++ + D
Sbjct: 407 SVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSC-DHIYPLRVFAGHLSD 465
Query: 211 CPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRR 270
+ N A ++ T G + D+ + V V + H V ++ AP G
Sbjct: 466 VDCVTFHPNSA---YVLT-GSSDKTCRLWDVH-RGHSVRVFNGHTQPVTAVAIAP-DGHT 519
Query: 271 LCSVADDSRALIWEVVGPGYR 291
+ S + +W++ G G R
Sbjct: 520 MASADSEGLIHLWDI-GTGRR 539
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 109 (43.4 bits), Expect = 0.00038, P = 0.00038
Identities = 44/178 (24%), Positives = 85/178 (47%)
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 4 DQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 63
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI------RFPTN----PVV 249
+E+ + + +++W+ + +A+ G D ++ V D+ + P + P
Sbjct: 64 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPE 120
Query: 250 VLSKHEG---SVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+L H G ++ SW P +CSV++D+ +W++ Y + P G V+PE
Sbjct: 121 LLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 176
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 109 (43.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 52/263 (19%), Positives = 109/263 (41%)
Query: 55 PETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSL 113
P + F+ RL H +++ P++E L I++ S D ++ W+I+ ++ L
Sbjct: 157 PRDNTFNPLIRLK-GHTKEGYGLSWNPNKEGL---ILSASDDQTVCHWDINANQNVAGEL 212
Query: 114 LNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDIS 173
+ S + W + D +IWD+ + AH EV ++
Sbjct: 213 QAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLA 272
Query: 174 WGGFNVF--ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
+ ++ F A+ S D +V ++DLR+ +E+ + + +++W+ + +A+ G
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDE--IFQVQWSPHNETILASSGT 330
Query: 232 DSNKVVVLDIRF-------------PTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDS 278
D ++ V D+ P + + H ++ SW P +CSV++D+
Sbjct: 331 DK-RLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDN 389
Query: 279 RALIWEVVGPGYRSGNGGPSGDV 301
+W++ Y + DV
Sbjct: 390 ILQVWQMADNIYNEVDEETPADV 412
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 11 VHTYMAQWPISTVAW--SVRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP +V W V D RL +G+ D N + + T D D
Sbjct: 32 VMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSDEQNHLLISKICMPTDDAQFD 90
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 109 (43.4 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 52/263 (19%), Positives = 109/263 (41%)
Query: 55 PETSDFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSL 113
P + F+ RL H +++ P++E L I++ S D ++ W+I+ ++ L
Sbjct: 157 PRDNTFNPLIRLK-GHTKEGYGLSWNPNKEGL---ILSASDDQTVCHWDINANQNVAGEL 212
Query: 114 LNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDIS 173
+ S + W + D +IWD+ + AH EV ++
Sbjct: 213 QAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLA 272
Query: 174 WGGFNVF--ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGM 231
+ ++ F A+ S D +V ++DLR+ +E+ + + +++W+ + +A+ G
Sbjct: 273 FNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDE--IFQVQWSPHNETILASSGT 330
Query: 232 DSNKVVVLDIRF-------------PTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDS 278
D ++ V D+ P + + H ++ SW P +CSV++D+
Sbjct: 331 DK-RLHVWDLSKIGEDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDN 389
Query: 279 RALIWEVVGPGYRSGNGGPSGDV 301
+W++ Y + DV
Sbjct: 390 ILQVWQMADNIYNEVDEETPADV 412
Score = 49 (22.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 16/59 (27%), Positives = 23/59 (38%)
Query: 11 VHTYMAQWPISTVAW--SVRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP +V W V D RL +G+ D N + + T D D
Sbjct: 32 VMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSDEQNHLLISKICMPTDDAQFD 90
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 110 (43.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 48/237 (20%), Positives = 104/237 (43%)
Query: 86 LNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
LN +++ S D ++ LW+I+ E + + N + ++ + W + +
Sbjct: 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD 252
Query: 145 DTTCVIWDI--DREILETQLV-AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKER 199
D +IWD + + V AH EV +S+ ++ F A+ S D +V ++DLR+ +
Sbjct: 253 DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL 312
Query: 200 STIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF-------------PTN 246
+E+ + + +++W+ + +A+ G D ++ V D+ P
Sbjct: 313 KLHSFESHKDE--IFQVQWSPHNETILASSGTD-RRLHVWDLSKIGEEQSTEDAEDGPPE 369
Query: 247 PVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGG-PSGDVE 302
+ + H ++ SW P +CSV++D+ +W++ Y P+ ++E
Sbjct: 370 LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDEEPEIPASELE 426
Score = 48 (22.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 15/60 (25%), Positives = 24/60 (40%)
Query: 11 VHTYMAQWPISTVAWS---VRHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP T W + D K RL +G+ D N + + + + D D
Sbjct: 39 VMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFD 98
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 34/145 (23%), Positives = 70/145 (48%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASV 183
+I++ W D + T S D T +WD++ E ++T+ ++ ++ ++D ++ N + +
Sbjct: 253 SISAVQW--MDGTTLLTGSWDHTLKVWDLNLEGIKTE-ISTNKSIFDANFSKLNRLIVTA 309
Query: 184 SGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF 243
S D ++R++D R + S + + + + W+ + F+ G N+ + D R
Sbjct: 310 SADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTE-EFLFVSGSYDNQNKLWDCRS 368
Query: 244 PTNPVVVLSKHEGSVNGISWA-PLY 267
P P+ L H V I W+ P Y
Sbjct: 369 PKAPLYDLLGHGEKVLDIDWSNPKY 393
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 34/145 (23%), Positives = 68/145 (46%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASV 183
+I++ W D + T S D T +WD+ E ++ + ++ ++ ++D S+ N + +
Sbjct: 253 SISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKAE-ISTNKSIFDASYSKLNHLILTA 309
Query: 184 SGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF 243
S D ++R++D R + S + + + + W+ + F+ G N+ + D R
Sbjct: 310 SADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTE-EFLFVSGSYDNQNKLWDCRS 368
Query: 244 PTNPVVVLSKHEGSVNGISWA-PLY 267
P P+ L H V I W+ P Y
Sbjct: 369 PKAPLYDLLGHGEKVLDIDWSNPKY 393
>MGI|MGI:1859866 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0040020 "regulation of meiosis" evidence=IGI]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050773
"regulation of dendrite development" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISO] [GO:0090129
"positive regulation of synapse maturation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1859866 GO:GO:0005813 GO:GO:0048471
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0050773 GO:GO:0000922
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0040020
GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OMA:RTPGKSN OrthoDB:EOG4CC414 EMBL:AB045313
EMBL:AF312208 EMBL:AK075998 EMBL:AK076030 EMBL:AK083459
EMBL:AK168650 EMBL:BC003215 IPI:IPI00320406 RefSeq:NP_075712.2
UniGene:Mm.289747 ProteinModelPortal:Q9JJ66 SMR:Q9JJ66
IntAct:Q9JJ66 MINT:MINT-2834618 STRING:Q9JJ66 PhosphoSite:Q9JJ66
PRIDE:Q9JJ66 DNASU:107995 Ensembl:ENSMUST00000006565 GeneID:107995
KEGG:mmu:107995 GeneTree:ENSGT00580000081599 InParanoid:Q9JJ66
NextBio:359849 Bgee:Q9JJ66 CleanEx:MM_CDC20 Genevestigator:Q9JJ66
GermOnline:ENSMUSG00000006398 Uniprot:Q9JJ66
Length = 499
Score = 118 (46.6 bits), Expect = 0.00042, P = 0.00042
Identities = 47/201 (23%), Positives = 87/201 (43%)
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDR-EILET-QLVAHDREVYDISW-GGFNVFASVSGD 186
DW+ + VA +D + +W+ +IL+ Q+ + ++W N A + +
Sbjct: 191 DWSSGNVLAVA---LDNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGNYLAVGTSN 247
Query: 187 CSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN 246
V+++D++ ++R + + + + L WN ++ + G S + D+R +
Sbjct: 248 AEVQLWDVQQQKRLRNMTSHSAR---VSSLSWNS----YILSSGSRSGHIHHHDVRVAEH 300
Query: 247 PVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPELC 306
V LS H V G+ WAP GR L S +D+ +W GPG SG +
Sbjct: 301 HVATLSGHSQEVCGLRWAP-DGRHLASGGNDNIVNVWPS-GPG-------ESGWAPLQTF 351
Query: 307 YQSMAEINVVRWSPLELDWIA 327
Q + V W P + + +A
Sbjct: 352 TQHQGAVKAVAWCPWQSNILA 372
>UNIPROTKB|E2R747 [details] [associations]
symbol:CORO2A "Coronin" species:9615 "Canis lupus
familiaris" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:LLQMFYR EMBL:AAEX03007981
Ensembl:ENSCAFT00000003912 NextBio:20856381 Uniprot:E2R747
Length = 603
Score = 119 (46.9 bits), Expect = 0.00042, P = 0.00042
Identities = 41/131 (31%), Positives = 64/131 (48%)
Query: 126 ITSFDWAGFDTRRVATCSVDTTCVIWDIDREIL-------ETQLVAHDREVYDISWG--G 176
+ W F+ +A+CS DTT IWDI +++L + +L+ H R V + W
Sbjct: 169 VLDIKWNPFNDFEIASCSEDTTIKIWDIPKQLLTKNLTACKKELIGHTRRVGLVEWHPTA 228
Query: 177 FNVFASVSGDCSVRVFDLRDKERSTIIYENPVQD--CP---LLRLEWNKADPRFMATVGM 231
N+ S D V V++L KE S I+ NPV+ C +L + +N + +AT
Sbjct: 229 ANILFSSGYDYKVMVWNLDTKE-SVIM--NPVRTIGCHQGVILSMSFN-TNGSLLATTCK 284
Query: 232 DSNKVVVLDIR 242
D K+ +LD R
Sbjct: 285 D-RKIRILDPR 294
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 116 (45.9 bits), Expect = 0.00045, P = 0.00045
Identities = 59/239 (24%), Positives = 106/239 (44%)
Query: 64 NRLIFDHPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELK-SLLNSNKTSE 121
+R++ H ++ + P E+T ++ +SGD + LW+I T L+ S+ S
Sbjct: 149 SRMLSGHKGYVSSCQYVPDEDT---HLITSSGDQTCVLWDI---TTGLRTSVFGGEFQSG 202
Query: 122 FSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQ--LVAHDREVYDISW--GGF 177
++ + S + + R + S DTT +WD R Q H+ +V + + G
Sbjct: 203 HTADVQSVSISSSNPRLFVSGSCDTTARLWDT-RVASRAQRTFYGHEGDVNTVKFFPDG- 260
Query: 178 NVFASVSGDCSVRVFDLRDKERSTIIYE-NPVQDCPLLRLEWNKADPRFMATVGMDSNKV 236
N F + S D + R+FD+R + + + Y+ + D P + R + VG +
Sbjct: 261 NRFGTGSEDGTCRLFDIRTEHQLQVYYQPHGDGDIPHVTSMAFSISGRLLF-VGYSNGDC 319
Query: 237 VVLDI---RFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRS 292
V D + N V + HEG ++ + + G LC+ + D+ IW G G+RS
Sbjct: 320 YVWDTLLAKVVLNLGGVQNSHEGRISCLGLSA-DGSALCTGSWDTNLKIW-AFG-GHRS 375
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 58/222 (26%), Positives = 96/222 (43%)
Query: 77 IAFFP-SEETLNP---DIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDW 131
I F P S +L+P ++ + + D S++LW + D + + T + + W
Sbjct: 279 IVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEP-VADI--EGHTVRVARVM----W 331
Query: 132 AGFDTRRVATCSVDTTCVIWDID--REILETQLVAHDREVYDISWGGFNVFASVSG-DCS 188
R + T D + +WD++ EIL + H VYDI++ A G D
Sbjct: 332 HP-SGRFLGTTCYDRSWRLWDLEAQEEILHQE--GHSMGVYDIAFHQDGSLAGTGGLDAF 388
Query: 189 VRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPV 248
RV+DLR R + E +++ + N +AT G N V D+R V
Sbjct: 389 GRVWDLRTG-RCIMFLEGHLKEIYGINFSPNGYH---IAT-GSGDNTCKVWDLR-QRRCV 442
Query: 249 VVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGY 290
+ H+ V G+ + P++G L + A D+ A IW PG+
Sbjct: 443 YTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIW--THPGW 482
>RGD|1598329 [details] [associations]
symbol:Sec31b "SEC31 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0044432 "endoplasmic reticulum part"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1598329 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K14005
GeneTree:ENSGT00390000003175 CTD:25956 OrthoDB:EOG470TGM
EMBL:AC103018 IPI:IPI00554203 RefSeq:NP_001129185.1
UniGene:Rn.45161 ProteinModelPortal:D4ADQ9
Ensembl:ENSRNOT00000035758 GeneID:309433 KEGG:rno:309433
UCSC:RGD:1598329 NextBio:660758 Uniprot:D4ADQ9
Length = 1179
Score = 122 (48.0 bits), Expect = 0.00046, P = 0.00046
Identities = 46/210 (21%), Positives = 90/210 (42%)
Query: 87 NPDIVATSGDS--LRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
N ++A GDS L L+ + + K L + K + + A+ + D+ F +A+ +
Sbjct: 84 NTGVIAGGGDSGMLTLYNVTHILSPGKEPLIAQK-QKHTGAVRALDFNPFQGNLLASGAS 142
Query: 145 DTTCVIWDIDREILETQLVAHDR----EVYDISWGGF--NVFASVSGDCSVRVFDLRDKE 198
D+ IWD++ + + + ++ +SW ++ +S V+DLR E
Sbjct: 143 DSEIFIWDLNHLTVPMTPGSKSQNPPEDIKALSWNRQVQHILSSAHPSGKAVVWDLRKNE 202
Query: 199 RSTIIYENPVQ-DCPLLRLEWNKADPRFMATVGMDSNKVVVL--DIRFPTNPVVVLSKHE 255
+ ++ + +C L WN + D V+ D+RF ++P+ VL H
Sbjct: 203 PIIKVSDHSSRMNCS--GLAWNPDIATQLVLCSEDDRLPVIQLWDLRFASSPLKVLESHS 260
Query: 256 GSVNGISWAPLYGRRLCSVADDSRALIWEV 285
+ +SW+ L S A D++ W +
Sbjct: 261 RGILSVSWSQADAELLLSSAKDNQIFCWNL 290
>CGD|CAL0004044 [details] [associations]
symbol:orf19.268 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0070912 "Ddb1-Ckn1 complex" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 46/177 (25%), Positives = 76/177 (42%)
Query: 126 ITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVFASVSG 185
I+ W +DT A+ S D T IWD + E+ +VYDI N + +
Sbjct: 127 ISCIQWWPYDTGMFASSSFDHTVKIWDTN-ELTPVHTFDLSNKVYDIDISAENALIATAN 185
Query: 186 DCS-VRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFP 244
D +R+ DL + + + + L ++W+ + +A+ G D +V + DIR
Sbjct: 186 DQPFIRLLDLNSTSSAHTLSGHKGKT---LVVKWHPINSNILASGGYDG-EVKIWDIRRS 241
Query: 245 -----------TNP---VVVLSK-HEGSVNGISWAPLYGRRLCSVADDSRALIWEVV 286
TN LSK H G V+G+ W G L +V +D + +W++V
Sbjct: 242 QSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHS-GSLLYTVGNDDKIRVWDMV 297
>UNIPROTKB|Q5AEK0 [details] [associations]
symbol:RAD28 "Putative uncharacterized protein RAD28"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004044 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000027 KO:K10570
RefSeq:XP_719966.1 ProteinModelPortal:Q5AEK0 STRING:Q5AEK0
GeneID:3638414 KEGG:cal:CaO19.268 Uniprot:Q5AEK0
Length = 447
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 46/177 (25%), Positives = 76/177 (42%)
Query: 126 ITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVFASVSG 185
I+ W +DT A+ S D T IWD + E+ +VYDI N + +
Sbjct: 127 ISCIQWWPYDTGMFASSSFDHTVKIWDTN-ELTPVHTFDLSNKVYDIDISAENALIATAN 185
Query: 186 DCS-VRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFP 244
D +R+ DL + + + + L ++W+ + +A+ G D +V + DIR
Sbjct: 186 DQPFIRLLDLNSTSSAHTLSGHKGKT---LVVKWHPINSNILASGGYDG-EVKIWDIRRS 241
Query: 245 -----------TNP---VVVLSK-HEGSVNGISWAPLYGRRLCSVADDSRALIWEVV 286
TN LSK H G V+G+ W G L +V +D + +W++V
Sbjct: 242 QSCLTQLDMSRTNDSSYTTKLSKAHSGPVSGLVWDHS-GSLLYTVGNDDKIRVWDMV 297
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00048
Identities = 43/163 (26%), Positives = 74/163 (45%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFD 193
D ++ T S DTTC +WDI+ T H +V +S F S + D S +++D
Sbjct: 153 DDGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWD 212
Query: 194 LRDKE-RSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
+RD R + + + D + + + + F AT G D + D+R + ++L
Sbjct: 213 IRDGMCRQS--FTGHISD--INAVSFFPSGYAF-AT-GSDDATCRLFDLR--ADQELLLY 264
Query: 253 KHEGSVNGISWAPLY--GRRLCSVADDSRALIWEVVGPGYRSG 293
H+ + GI+ GR L + DD +W+ + G R+G
Sbjct: 265 SHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGG-RAG 306
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00048
Identities = 57/234 (24%), Positives = 97/234 (41%)
Query: 61 SADNRLIFDHPYTPTNIAFFPSEET-LNPDIVATSGDSLRLWEIHDDRT--ELKSLLNSN 117
S D +LI YT + P + + A SG+ + + + + LKS +
Sbjct: 74 SQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNV 133
Query: 118 KTSEFSSAITSF-DWAGF-DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWG 175
K S SA T + F D + T S DTTC +WDI+ +T V H + ++
Sbjct: 134 KVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVS 193
Query: 176 -GFNVFASVSGDCSVRVFDLRDKE-RSTII-YENPVQDCPLLRLEWNKADPRFMATVGMD 232
+ +F S + D S +++D+R+ R T +E+ + + + T G D
Sbjct: 194 PDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFF------PNGEAICT-GSD 246
Query: 233 SNKVVVLDIRFPTNPVVVLSKHEGSVNGISWAP--LYGRRLCSVADDSRALIWE 284
+ D+R + + HE + GI+ L GR L + DD +W+
Sbjct: 247 DASCRLFDLR--ADQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 112 (44.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 49/222 (22%), Positives = 93/222 (41%)
Query: 131 WAGFDTRRVATCSVDTTCVIWDIDR-----EILETQLV--AHDREVYDISWGGFN--VFA 181
W + + + S D T +WDI+ +I++ + V H V D++W + +F
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFG 243
Query: 182 SVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDI 241
SV+ D + ++D R S + + L +N +AT D V + D+
Sbjct: 244 SVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKT-VALWDL 302
Query: 242 RFPTNPVVVLSKHEGSV-NGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGD 300
R + H+ + + W+P L S D R +W++ G + + D
Sbjct: 303 RNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQ-SAEDAED 361
Query: 301 VEPELCY---QSMAEINVVRWSPLELDWIAIAFVNKLQLLKV 339
PEL + A+I+ W+P E W+ I V++ ++++
Sbjct: 362 GPPELLFIHGGHTAKISDFSWNPNE-PWV-ICSVSEDNIMQI 401
Score = 45 (20.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 11 VHTYMAQWPISTVAW 25
V T+ QWP TV W
Sbjct: 34 VMTHALQWPSLTVQW 48
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 124 SAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLVAHDREVYDISWGGFNV-F 180
SA+ F +G + +CS+D +W++ +R L T + H + V DI + F
Sbjct: 292 SAVRLFPLSG---HLLLSCSMDCKIKLWEVYGERRCLRT-FIGHSKAVRDICFNTAGTQF 347
Query: 181 ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLD 240
S + D ++++D + + V C + +K + F+A GM K+V D
Sbjct: 348 LSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQN-LFVA--GMSDKKIVQWD 404
Query: 241 IRFPTNPVVV-LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWE 284
IR + +V +H G+VN I + RR S +DD +WE
Sbjct: 405 IR--SGEIVQEYDRHLGAVNTIVFVD-ENRRFVSTSDDKSLRVWE 446
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 107 (42.7 bits), Expect = 0.00053, P = 0.00053
Identities = 39/156 (25%), Positives = 77/156 (49%)
Query: 164 AHDREVYDISWGGFNVF--ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKA 221
AH EV +S+ ++ F A+ S D +V ++DLR+ + +E+ + + +++W+
Sbjct: 19 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE--IFQVQWSPH 76
Query: 222 DPRFMATVGMDSNKVVVLDI------RFPTN----PVVVLSKHEG---SVNGISWAPLYG 268
+ +A+ G D ++ V D+ + P + P +L H G ++ SW P
Sbjct: 77 NETILASSGTD-RRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEP 135
Query: 269 RRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPE 304
+CSV++D+ +W++ Y + P G V+PE
Sbjct: 136 WVICSVSEDNIMQVWQMAENIYNDED--PEGSVDPE 169
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 118 (46.6 bits), Expect = 0.00053, P = 0.00053
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLV-AHDREVYDISWGGFNV-FASVSGDCSVRVF 192
D+ + +CS D + WD+ T L H V+D+ F++ FAS S D + R++
Sbjct: 353 DSSGLLSCSEDMSIRYWDLG-SFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLW 411
Query: 193 DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
D+ IY + D ++ N ++AT D K V L N V + +
Sbjct: 412 SF-DRTYPLRIYAGHLADVDCVKFHPNS---NYLATGSTD--KTVRLWSAQQGNSVRLFT 465
Query: 253 KHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
H G V +S++P G+ L S +D R +W++
Sbjct: 466 GHRGPVLSLSFSP-NGKYLASAGEDQRLKLWDL 497
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 34/145 (23%), Positives = 67/145 (46%)
Query: 125 AITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASV 183
+I++ W D + T S D T +WD+ E ++ + ++ ++ ++D S+ N + +
Sbjct: 253 SISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKAE-ISTNKSIFDASYSKLNHLILTA 309
Query: 184 SGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRF 243
S D ++R++D R + S + + + + W+ + F+ G N+ + D R
Sbjct: 310 SADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTE-EFLFVSGSYDNQNKLWDCRS 368
Query: 244 PTNPVVVLSKHEGSVNGISWA-PLY 267
P P+ L H V I W P Y
Sbjct: 369 PKAPLYDLLGHGEKVLDIDWTNPKY 393
>UNIPROTKB|Q5ZI36 [details] [associations]
symbol:CDC20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005680 "anaphase-promoting complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0040020 "regulation of meiosis"
evidence=IEA] [GO:0051488 "activation of anaphase-promoting complex
activity" evidence=IEA] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005680 GO:GO:0031145
GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991
HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
GeneTree:ENSGT00580000081599 OMA:AVALDNC EMBL:AADN02012741
EMBL:AADN02012739 EMBL:AJ720948 IPI:IPI00601740
RefSeq:NP_001006536.1 UniGene:Gga.9187 STRING:Q5ZI36
Ensembl:ENSGALT00000016208 GeneID:424563 KEGG:gga:424563
InParanoid:Q5ZI36 NextBio:20826883 Uniprot:Q5ZI36
Length = 507
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 61/300 (20%), Positives = 125/300 (41%)
Query: 5 SEKKPGVHTYMAQWPISTVAWSVRHDRKSRLA--VGSFLEDYSNKIELVNFNPETSDFSA 62
+E P W ++ + V + RL+ + E Y N ++++ ++ +T+ S+
Sbjct: 110 AENSPTKKEQQKSWAMNLNGFDVEEAKILRLSGKPQNAPEGYQNNLKVL-YSQKTTPASS 168
Query: 63 --DNRLIFDHPYTPTNIAFFP---SEETLN------PDIVATSGDS-LRLWEIHDDRTEL 110
R I P P I P ++ LN + +A + D+ + LW H E+
Sbjct: 169 RKHGRYI---PSMPDRILDAPEIRNDYYLNLIDWSSQNFLAVALDNCVYLWN-HSTG-EI 223
Query: 111 KSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVY 170
LL ++ S+++ W + +A + + +WD+ ++ + +H V
Sbjct: 224 IQLLQIENPDDYVSSVS---WIK-EGNYLAVGTRNAEVQLWDVQQQKRLRSMTSHSSRVG 279
Query: 171 DISWGGFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVG 230
+SW + + +S S + D+R E Q+ + L+W+ D R++A+ G
Sbjct: 280 SLSWNSY-ILSSGSRTGHIHHHDVRVAEHHVATLTGHTQE--VCGLKWS-LDGRYLASGG 335
Query: 231 MDSNKVVVLDIRFPTN---PVVVLSKHEGSVNGISWAPLYGRRLCSVA--DDSRALIWEV 285
D+ + ++ + PV ++H+G+V ++W P L + D IW V
Sbjct: 336 NDNLVNIWPSVQGDSGDFTPVQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 395
Score = 115 (45.5 bits), Expect = 0.00093, P = 0.00092
Identities = 50/203 (24%), Positives = 90/203 (44%)
Query: 130 DWAGFDTRRVATCSVDTTCVIWDIDR-EILET-QLVAHDREVYDISW--GGFNVFASVSG 185
DW+ + VA +D +W+ EI++ Q+ D V +SW G N A +
Sbjct: 198 DWSSQNFLAVA---LDNCVYLWNHSTGEIIQLLQIENPDDYVSSVSWIKEG-NYLAVGTR 253
Query: 186 DCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPT 245
+ V+++D++ ++R + + + + L WN ++ + G + + D+R
Sbjct: 254 NAEVQLWDVQQQKRLRSMTSHSSR---VGSLSWNS----YILSSGSRTGHIHHHDVRVAE 306
Query: 246 NPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGYRSGNGGPSGDVEPEL 305
+ V L+ H V G+ W+ L GR L S +D+ IW P + G SGD P
Sbjct: 307 HHVATLTGHTQEVCGLKWS-LDGRYLASGGNDNLVNIW----PSVQ----GDSGDFTPVQ 357
Query: 306 CY-QSMAEINVVRWSPLELDWIA 327
+ Q + V W P + + +A
Sbjct: 358 TFTQHQGAVKAVAWCPWQSNVLA 380
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 43/217 (19%), Positives = 92/217 (42%)
Query: 91 VATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVI 150
+ T S+ +W++ D +L + + + + W VA+ S D +
Sbjct: 185 IGTMESSIEIWDL-DLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSEDKKVKV 243
Query: 151 WDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCSVRVFDLRDKERSTIIYENPV 208
WD+ + + H+++V+ ++W + V S S D +V + D RD S + +
Sbjct: 244 WDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWST-- 301
Query: 209 QDCPLLRLEWNK-ADPRFMATVGMDSNKVVVLDIRFPT-NPVVVLSKHEGSVNGISWAPL 266
+ + +L W+ ++ F+ V + V D R +P ++ H+ V+ IS+
Sbjct: 302 -EAKVEKLAWDPHSEHSFV--VSLKDGTVKGFDTRASDLSPSFIIHAHDSEVSSISYNIH 358
Query: 267 YGRRLCSVADDSRALIWEVVG--PGYRSGNGGPSGDV 301
L + + D +W++ P + + N +G+V
Sbjct: 359 APNLLATGSADESVKLWDLSNNQPSWIATNKPNAGEV 395
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 53/212 (25%), Positives = 82/212 (38%)
Query: 87 NP--DIVAT-SGDSL-RLWEIHDDR----TEL---KSLLNSNKTSEFSSAITSFDWAGFD 135
NP D++A+ SGDS R+W ++++ T+L + + +TS DW D
Sbjct: 188 NPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNS-D 246
Query: 136 TRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFDL 194
+A S D IW + + T L H ++ + W N S D + ++D
Sbjct: 247 GTLLAMGSYDGFARIWTENGNLAST-LGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDA 305
Query: 195 RDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTN-PVVVLSK 253
E + P P L ++W T S + + R + PV
Sbjct: 306 HTGEAKQ---QFPFHSAPALDVDWQNN-----MTFASCSTDMCIHVCRLGCDHPVKTFQG 357
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
H VN I W P G L S +DD IW +
Sbjct: 358 HTNEVNAIKWDPS-GMLLASCSDDMTLKIWSM 388
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 44/164 (26%), Positives = 74/164 (45%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLV-AHDREVYDISWGGFNV-FASVSGDCSVRVF 192
D+ + +CS D + WD+ R T L H V+D+ ++ FAS S D + R++
Sbjct: 353 DSSGLLSCSEDMSIRYWDL-RSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLW 411
Query: 193 DLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLS 252
D+ IY + D ++ N ++AT D K V L N V + +
Sbjct: 412 SF-DRTYPLRIYAGHLLDVDCVKFHPNS---NYLATGSTD--KTVRLWSTQQGNSVRLFT 465
Query: 253 KHEGSVNGISWAPLYGRRLCSVADDSRALIWEVV-GPGYRSGNG 295
H G V ++++P G+ L S +D R +W++ G Y+ G
Sbjct: 466 GHRGPVLALAFSP-NGKYLASAGEDQRLKLWDLASGTLYKELRG 508
>DICTYBASE|DDB_G0278733 [details] [associations]
symbol:aip1 "actin-interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0043327 "chemotaxis to cAMP" evidence=IGI]
[GO:0030041 "actin filament polymerization" evidence=IGI]
[GO:0030010 "establishment of cell polarity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0060187 "cell pole" evidence=IDA]
[GO:0042641 "actomyosin" evidence=IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006935 "chemotaxis" evidence=IMP] [GO:0006909
"phagocytosis" evidence=IMP] [GO:0006907 "pinocytosis"
evidence=IMP] [GO:0001891 "phagocytic cup" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000152_GR
GO:GO:0008283 eggNOG:COG2319 GO:GO:0006909 GO:GO:0006935
GO:GO:0030042 EMBL:AAFI02000024 GO:GO:0001891 GO:GO:0030864
GO:GO:0006907 GO:GO:0060187 EMBL:U36936 RefSeq:XP_642008.1
ProteinModelPortal:P54686 STRING:P54686 EnsemblProtists:DDB0214916
GeneID:8621739 KEGG:ddi:DDB_G0278733 OMA:INGIAAW
ProtClustDB:CLSZ2430741 Uniprot:P54686
Length = 597
Score = 83 (34.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 165 HDREVYDISWGGFNVFASVSGDCSVR-VFDLRDKERSTIIYENPVQDCPLLRLEWNKADP 223
H + D+S+ + + SG CS R V KE + + N + + W+ D
Sbjct: 481 HRGAITDLSYSPCGKYLA-SG-CSNREVIVWSGKEAKSKGWVN--HTARINAVAWSN-DS 535
Query: 224 RFMATVGMDSNKVVVLDIRFPT-NPVVVLSKHEGSVNGISWAPLYG--RRLCSVADDSRA 280
+F+A+ +DS ++ + ++ PT +PV V + H G VN + +YG + S ++
Sbjct: 536 KFVASASLDS-QIYIWNVENPTASPVQVKNSHLGGVNDV----IYGSNNEIFSAGNEGAI 590
Query: 281 LIWEV 285
IW V
Sbjct: 591 KIWNV 595
Score = 79 (32.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 103 IHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWD 152
++D +T K L+ N + + I W+ D RV T S D +C IWD
Sbjct: 217 VYDGKTGEK-LIELNPAQQHTGGIYGCSWSA-DNNRVLTASADKSCKIWD 264
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 108 (43.1 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 56/269 (20%), Positives = 117/269 (43%)
Query: 55 PETS-DFSADNRLIFDHPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKS 112
P+ S D S D RL H +++ P+ L+ ++++ S D ++ LW+I E K
Sbjct: 161 PDPSGDCSPDLRLR-GHQKEGYGLSWNPN---LSGNLLSASDDHTICLWDISGAPKEGKI 216
Query: 113 LLNSNKTSEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDI--DREILETQLV-AHDREV 169
+ + ++ + W + + D +IWD + + V AH EV
Sbjct: 217 VDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEV 276
Query: 170 YDISWGGFNVF--ASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMA 227
+S+ ++ F A+ S D +V ++DLR+ + +E+ + + +++W+ + +A
Sbjct: 277 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE--IFQVQWSPHNETILA 334
Query: 228 TVGMDSNKVVVLDIRF-------------PTNPVVVLSKHEGSVNGISWAPLYGRRLCSV 274
+ G D ++ V D+ P + + H ++ SW P +CSV
Sbjct: 335 SSGTD-RRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSV 393
Query: 275 ADDSRALIWEVVGPGYRSGNGG-PSGDVE 302
++D+ +W++ Y P+ ++E
Sbjct: 394 SEDNIMQVWQMAENIYNDEEPDTPASELE 422
Score = 48 (22.0 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 11 VHTYMAQWPISTVAW--SV-RHDRKS----RLAVGSFLEDYSNKIELVNFNPETSDFSAD 63
V T+ +WP TV W V R + K RL +G+ D N + + + D D
Sbjct: 34 VMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSDEQNHLVIASAQIPNDDAQFD 93
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 113 (44.8 bits), Expect = 0.00070, P = 0.00070
Identities = 51/216 (23%), Positives = 84/216 (38%)
Query: 76 NIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGF 134
N+A+ PS L + GD S+RLW + KS+L + W+
Sbjct: 18 NVAWNPSGTIL----ASCGGDKSIRLWGLEGGSWVCKSVLLDGH----QRTVRGVSWSNC 69
Query: 135 DTRRVATCSVDTTCVIWDIDREILET--QLVAHDREVYDISWGGFNVF-ASVSGDCSVRV 191
R +A+ S D T IW + E+ L H+ EV W F A+ S D +V +
Sbjct: 70 G-RYLASSSFDGTTCIWRRQDDTFESCATLEGHENEVKACGWSPSGRFLATCSRDKTVWI 128
Query: 192 FDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVL 251
+++ + E + ++ W+ D +A+ D+ + L
Sbjct: 129 WEVGEDEEFECASVQTCHSQDVKKVLWHP-DRDELASASYDNTIRFFCEEVDDWQCYCTL 187
Query: 252 SKHEGSVNGISWAPLYGRRLCSVADDSRALIWEVVG 287
KH +V G+S+ P +L S A D +W G
Sbjct: 188 DKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKG 223
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 41/156 (26%), Positives = 72/156 (46%)
Query: 135 DTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGF-NVFASVSGDCSVRVFD 193
+ R + + S D T +W +D HD+ V+D+ WG F + F S D + R++
Sbjct: 330 NARWLLSSSADRTIRLWSLDLWQCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLW- 388
Query: 194 LRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSK 253
+ D R I+ QD + N A ++ T G S++ V + N V + +
Sbjct: 389 VTDHIRQQRIFVGHEQDVDCVCFHPNSA---YVFT-G-SSDRTVRMWAVTTGNAVRMFTG 443
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPG 289
H G++ ++ + G+ L S D L+W++ GPG
Sbjct: 444 HTGNITALACSR-DGKTLASADDHGSILLWDL-GPG 477
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 47/163 (28%), Positives = 77/163 (47%)
Query: 109 ELKSLLNSN-KTSE---FSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDRE-ILETQLV 163
+LKS L S+ K E S + S W D R +A+ S D T V++ ++R+ L+
Sbjct: 10 DLKSYLRSHSKIREQRSHMSKVHSVCWNA-DGRYLASGSFDKTVVVYSLERDRFLKGNTY 68
Query: 164 -AHDREVYDISWGGFNV--FASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNK 220
H V + W N FA+ SGD +VR++D+R + + ++ + + W+
Sbjct: 69 RGHTASVDQLCWHRTNPDQFATASGDKTVRIWDIR-VGKCVSVTNTKGEN---INIAWSP 124
Query: 221 ADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSKHEGSVNGISW 263
D + +A VG + + +D R TN + V VN ISW
Sbjct: 125 -DGKTIA-VGNKEDLITFIDTR--TNKIRVEEPFSFEVNEISW 163
>UNIPROTKB|Q5ZJW8 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0031572 "G2
DNA damage checkpoint" evidence=ISS] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISS] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 EMBL:AJ720316
IPI:IPI00592297 RefSeq:NP_001026219.1 UniGene:Gga.20498
ProteinModelPortal:Q5ZJW8 STRING:Q5ZJW8 Ensembl:ENSGALT00000015990
GeneID:421373 KEGG:gga:421373 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 InParanoid:Q5ZJW8 OMA:ICTYFHR
OrthoDB:EOG4N5VWH NextBio:20824150 Uniprot:Q5ZJW8
Length = 720
Score = 88 (36.0 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 24/110 (21%), Positives = 49/110 (44%)
Query: 176 GFNVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNK 235
G N+FA+ + D S+ +F++ + + + Q+ D +F+ + D N
Sbjct: 280 GANLFANCTDD-SIYMFNMTSLKTFPVAVFSGHQNSTFYIKSSISPDDQFLVSGSSDCN- 337
Query: 236 VVVLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
+ + P+ P +L H V I+W P ++ + +DD+ IW +
Sbjct: 338 AYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIWRL 387
Score = 75 (31.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 71 PYTPTNIAFFPSEETLNPDIVATSGDSLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFD 130
P P +F + + VA +RL++ T + L S + S+A+
Sbjct: 45 PVPPFGCSFSAAPNFEHVLAVANEEGFVRLYDTEAQNT---TKLISKEWQAHSNAVFDLA 101
Query: 131 WAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN--VFASVSGDCS 188
W + R+ T S D T +WD+ L H + +++ F VF + D +
Sbjct: 102 WVPGE-HRIVTASGDQTAKVWDVRAGELLGICKGHQCSLKSVAFSRFEKAVFCTGGRDGN 160
Query: 189 VRVFDLR 195
+ V+D R
Sbjct: 161 IMVWDTR 167
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 116 (45.9 bits), Expect = 0.00074, P = 0.00074
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 137 RRVATCSVDTTCVIWDID--REILETQLVAHDREVYDISWGGFNVFASVSG-DCSVRVFD 193
R + T D + +WD++ EIL + H VYDI++ A G D RV+D
Sbjct: 335 RFLGTTCYDRSWRLWDLEAQEEILHQE--GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 392
Query: 194 LRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSK 253
LR R + E +++ + N +AT G N V D+R V +
Sbjct: 393 LRTG-RCIMFLEGHLKEIYGINFSPNGYH---IAT-GSGDNTCKVWDLR-QRRCVYTIPA 446
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGY 290
H+ V G+ + P++G L + A D+ A IW PG+
Sbjct: 447 HQNLVTGVKFEPIHGNFLLTGAYDNTAKIW--THPGW 481
>MGI|MGI:2685187 [details] [associations]
symbol:Sec31b "Sec31 homolog B (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0044432 "endoplasmic reticulum part" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2685187 GO:GO:0012507 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005789
GO:GO:0015031 eggNOG:NOG248389 HOGENOM:HOG000230582
HOVERGEN:HBG055626 KO:K14005 GeneTree:ENSGT00390000003175 CTD:25956
OMA:RLECLYE OrthoDB:EOG470TGM EMBL:AK158017 EMBL:AC151478
EMBL:BC042701 IPI:IPI00667569 IPI:IPI00854010 RefSeq:NP_001028515.1
UniGene:Mm.329873 ProteinModelPortal:Q3TZ89 SMR:Q3TZ89
PhosphoSite:Q3TZ89 PaxDb:Q3TZ89 PRIDE:Q3TZ89
Ensembl:ENSMUST00000063632 Ensembl:ENSMUST00000111985 GeneID:240667
KEGG:mmu:240667 UCSC:uc008hpu.1 UCSC:uc012bmg.1 InParanoid:Q3TZ89
NextBio:384667 Bgee:Q3TZ89 CleanEx:MM_SEC31B Genevestigator:Q3TZ89
Uniprot:Q3TZ89
Length = 1158
Score = 120 (47.3 bits), Expect = 0.00074, P = 0.00074
Identities = 50/210 (23%), Positives = 86/210 (40%)
Query: 87 NPDIVATSGDS--LRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
N ++A GD+ L L+ + + K L + K + + A+ + D+ F +A+ +
Sbjct: 84 NSGVIAGGGDNGTLTLYNVTHVLSSGKEPLIAQK-QKHTGAVRALDFNPFQGNLLASGAS 142
Query: 145 DTTCVIWDIDR-EILETQLVAHDREVYDI---SWG--GFNVFASVSGDCSVRVFDLRDKE 198
D+ IWD++ + T DI SW ++ AS V+DLR E
Sbjct: 143 DSEIFIWDLNHLSVPMTPGPKSQNPPEDIKALSWNLQVQHILASAHPSGKAVVWDLRKNE 202
Query: 199 RSTIIYENPVQ-DCPLLRLEWNKADPRFMATVGMDSNKVVVL--DIRFPTNPVVVLSKHE 255
+ + + +C L WN + D V+ D+RF ++P+ VL H
Sbjct: 203 PIIKVSSHSSRMNCS--GLAWNPDIATQLVLCSEDDQLPVIQLWDLRFASSPLKVLESHS 260
Query: 256 GSVNGISWAPLYGRRLCSVADDSRALIWEV 285
+ +SW L S A DS+ W +
Sbjct: 261 RGILSMSWNQADAELLLSTAKDSQIFCWNL 290
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 116 (45.9 bits), Expect = 0.00077, P = 0.00077
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 137 RRVATCSVDTTCVIWDID--REILETQLVAHDREVYDISWGGFNVFASVSG-DCSVRVFD 193
R + T D + +WD++ EIL + H VYDI++ A G D RV+D
Sbjct: 351 RFLGTTCYDRSWRLWDLEAQEEILHQE--GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 408
Query: 194 LRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSK 253
LR R + E +++ + N +AT G N V D+R V +
Sbjct: 409 LRTG-RCIMFLEGHLKEIYGINFSPNGYH---IAT-GSGDNTCKVWDLR-QRRCVYTIPA 462
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGY 290
H+ V G+ + P++G L + A D+ A IW PG+
Sbjct: 463 HQNLVTGVKFEPIHGNFLLTGAYDNTAKIW--THPGW 497
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 116 (45.9 bits), Expect = 0.00078, P = 0.00078
Identities = 45/157 (28%), Positives = 70/157 (44%)
Query: 137 RRVATCSVDTTCVIWDID--REILETQLVAHDREVYDISWGGFNVFASVSG-DCSVRVFD 193
R + T D + +WD++ EIL + H VYDI++ A G D RV+D
Sbjct: 353 RFLGTTCYDRSWRLWDLEAQEEILHQE--GHSMGVYDIAFHQDGSLAGTGGLDAFGRVWD 410
Query: 194 LRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSK 253
LR R + E +++ + N +AT G N V D+R V +
Sbjct: 411 LRTG-RCIMFLEGHLKEIYGINFSPNGYH---IAT-GSGDNTCKVWDLR-QRRCVYTIPA 464
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGY 290
H+ V G+ + P++G L + A D+ A IW PG+
Sbjct: 465 HQNLVTGVKFEPIHGNFLLTGAYDNTAKIW--THPGW 499
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 58/215 (26%), Positives = 94/215 (43%)
Query: 80 FPSEETLNPDIVATSGD--SLRLWEIHDDRTELKSLLNSNKTSEFSSAITSFDWAGFDTR 137
FP+ P + T D +++LW+I + + + N+ + + TS D
Sbjct: 148 FPARR--GPQLACTGSDDGTVKLWDIRK-KASVHTFQNTYQVLSVTFNDTS------D-- 196
Query: 138 RVATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFNVFA-SVSGDCSVRVFDLRD 196
++ + +D +WD+ + L + H V +S + S S D SVRV+D+R
Sbjct: 197 QIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRP 256
Query: 197 ---KERSTIIYENPVQDCP--LLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVV- 250
KER I++ V + LLR W+ AD +A G V + D T +V
Sbjct: 257 FAPKERCVKIFQGNVHNFEKNLLRCSWS-ADGSKIAA-GSADRFVYIWDTT--TRRIVYK 312
Query: 251 LSKHEGSVNGISWAPLYGRRLCSVADDSRALIWEV 285
L H GSVN +++ P L S + D R I E+
Sbjct: 313 LPGHAGSVNEVAFHPEEPIVL-SGSSDKRLYIGEI 346
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00087
Identities = 53/198 (26%), Positives = 83/198 (41%)
Query: 91 VATSGDS-LRLWEIHDDRTELKSLLNSNKTSEFS-SAITSFDWAGFD-TRRVATCSVDTT 147
+A S D LR H + KS L S T E SA+ + D + +CS D T
Sbjct: 298 IALSTDYVLRTGPFHPVKDRSKSHL-SLSTEELQESALKRYQAVCPDEVESLVSCSDDNT 356
Query: 148 CVIWDIDREILETQLVAHDREVYDISWG-GFNVFASVSGDCSVRVFDLRDKERSTIIYEN 206
+W ++ ++ H V D+ + + AS S D SVR++ D + +
Sbjct: 357 LYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMAT-FRG 415
Query: 207 PVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVV-LSKHEGSVNGISWAP 265
VQ + + W+ AD R + + DS + V ++ T + L H V G+ WAP
Sbjct: 416 HVQ--AVYTVAWS-ADSRLIVSGSKDST-LKVWSVQ--TKKLAQELPGHADEVFGVDWAP 469
Query: 266 LYGRRLCSVADDSRALIW 283
G R+ S D +W
Sbjct: 470 -DGSRVASGGKDKVIKLW 486
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 106 (42.4 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 140 ATCSVDTTCVIWDIDREILETQLVAHDREVYDISWGGFN-VFASVSGDCSVRVFDLRD-K 197
AT S D TC IW+++ LE L H R ++D+S+ ++ + A+ SGD +V+++ L
Sbjct: 507 ATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFS 566
Query: 198 ERSTII-YENPVQDCPLL 214
T+ + N VQ C +
Sbjct: 567 VMKTLEGHTNAVQRCSFI 584
Score = 56 (24.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 86 LNPDIVATSGDSLRLWEIHDDRTELKSL-LNSNKTSEFSSAITSFDWAGFDTRRVATCSV 144
LN +AT+ SLR+ + D SL L+ + S D A D +AT S
Sbjct: 350 LNKLALATNSPSLRIIPVPDLSGPEASLPLDVEIYEGHEDLLNSLD-ATEDGLWIATASK 408
Query: 145 DTTCVIW 151
D T ++W
Sbjct: 409 DNTAIVW 415
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 113 (44.8 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 120 SEFSSAITSFDWAGFDTRRVATCSVDTTCVIWDIDREILETQLVAHDREVYD-ISWGGF- 177
S AI+S W+ D + + S D T +WD++ L++ L + +V++ IS+
Sbjct: 254 SGHKEAISSVLWS--DAEEICSASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPLC 309
Query: 178 NVFASVSGDCSVRVFDLRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVV 237
AS S D +R++D R K+ S + + L+W+ + + + +D N V
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLD-NIVK 368
Query: 238 VLDIRFPTNPVVVLSKHEGSVNGISWAPLYGRRLCSVADD 277
+ D R P+ L+ HE V + W G L AD+
Sbjct: 369 LWDTRSCKAPLYDLAAHEDKVLSVDWTDT-GLLLSGGADN 407
Score = 41 (19.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 12/48 (25%), Positives = 29/48 (60%)
Query: 67 IFDHPYTPTNIAFFPSEETLNPDIVATSGD-SLRLWEIHDDRTELKSL 113
I H ++A+ ++ L+ ++++S D ++ LWE + +R ++K+L
Sbjct: 136 IVGHTDVVKDVAWV-KKDNLSCLLLSSSMDQTILLWEWNVERNKVKAL 182
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 115 (45.5 bits), Expect = 0.00096, P = 0.00096
Identities = 43/157 (27%), Positives = 68/157 (43%)
Query: 137 RRVATCSVDTTCVIWDID--REILETQLVAHDREVYDISWGGFNVFASVSG-DCSVRVFD 193
R + T D + +WD++ EIL + H + VYDI++ A G D RV+D
Sbjct: 335 RFLGTTCYDHSWRLWDLEAQEEILHQE--GHSKGVYDIAFHTDGSLAGTGGLDAFGRVWD 392
Query: 194 LRDKERSTIIYENPVQDCPLLRLEWNKADPRFMATVGMDSNKVVVLDIRFPTNPVVVLSK 253
LR R + E +++ L N + G N V D+R + +
Sbjct: 393 LRTG-RCIMFLEGHLKEIYGLNFSPNG----YHVATGSGDNTCKVWDLR-QRKCIYTIPA 446
Query: 254 HEGSVNGISWAPLYGRRLCSVADDSRALIWEVVGPGY 290
H+ V G+ + P +G L + A D+ A IW PG+
Sbjct: 447 HQNLVTGVKFEPNHGNFLLTGAYDNTAKIW--THPGW 481
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 339 339 0.00094 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 220
No. of states in DFA: 618 (66 KB)
Total size of DFA: 269 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.88u 0.10s 26.98t Elapsed: 00:00:02
Total cpu time: 26.93u 0.10s 27.03t Elapsed: 00:00:02
Start: Fri May 10 13:17:12 2013 End: Fri May 10 13:17:14 2013
WARNINGS ISSUED: 1