Query 040309
Match_columns 100
No_of_seqs 154 out of 1007
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 11:16:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 99.9 2.3E-27 7.9E-32 169.2 11.3 94 1-100 252-345 (353)
2 3p9c_A Caffeic acid O-methyltr 99.9 2.4E-22 8.1E-27 143.7 11.2 97 1-100 267-364 (364)
3 3reo_A (ISO)eugenol O-methyltr 99.9 1.2E-21 4E-26 140.2 11.0 97 1-100 269-366 (368)
4 3lst_A CALO1 methyltransferase 99.8 1.7E-20 5.8E-25 133.0 10.1 93 1-100 255-347 (348)
5 3gwz_A MMCR; methyltransferase 99.8 1.3E-20 4.5E-25 134.6 9.1 92 1-100 276-368 (369)
6 1zg3_A Isoflavanone 4'-O-methy 99.8 3E-20 1E-24 132.0 9.6 97 1-100 259-358 (358)
7 3i53_A O-methyltransferase; CO 99.8 7.6E-20 2.6E-24 128.6 8.5 89 1-100 243-331 (332)
8 2ip2_A Probable phenazine-spec 99.8 1.4E-19 4.6E-24 127.2 9.7 93 1-100 241-333 (334)
9 1fp2_A Isoflavone O-methyltran 99.8 2.3E-19 7.9E-24 127.2 10.2 96 1-100 254-352 (352)
10 1fp1_D Isoliquiritigenin 2'-O- 99.8 5.1E-19 1.7E-23 126.4 8.4 97 1-100 275-372 (372)
11 3dp7_A SAM-dependent methyltra 99.7 2.7E-18 9.1E-23 122.5 7.8 97 1-100 256-354 (363)
12 3mcz_A O-methyltransferase; ad 99.7 3.8E-17 1.3E-21 115.4 8.6 92 1-100 256-348 (352)
13 1tw3_A COMT, carminomycin 4-O- 99.7 1.7E-17 5.7E-22 117.5 6.3 93 1-100 257-355 (360)
14 1qzz_A RDMB, aclacinomycin-10- 99.7 4.3E-17 1.5E-21 115.8 6.4 93 1-100 256-355 (374)
15 2r3s_A Uncharacterized protein 99.7 1.5E-16 5.2E-21 111.3 8.9 93 1-99 240-333 (335)
16 1x19_A CRTF-related protein; m 99.6 1.5E-15 5E-20 107.8 9.8 90 1-100 264-358 (359)
17 3dtn_A Putative methyltransfer 99.0 5.6E-09 1.9E-13 69.2 9.1 94 1-98 117-223 (234)
18 4gek_A TRNA (CMO5U34)-methyltr 98.8 1.5E-08 5E-13 69.5 6.4 92 2-97 148-254 (261)
19 3bxo_A N,N-dimethyltransferase 98.7 1.5E-08 5.3E-13 67.0 4.9 95 2-99 110-237 (239)
20 3hnr_A Probable methyltransfer 98.7 1E-07 3.5E-12 62.4 8.8 92 1-99 114-210 (220)
21 3ou2_A SAM-dependent methyltra 98.6 1.1E-07 3.8E-12 62.0 7.2 84 1-89 115-205 (218)
22 2qe6_A Uncharacterized protein 98.6 4.2E-08 1.4E-12 67.6 5.1 74 1-85 165-238 (274)
23 2ex4_A Adrenal gland protein A 98.6 1.4E-07 4.7E-12 63.0 7.4 73 1-90 154-226 (241)
24 1xtp_A LMAJ004091AAA; SGPP, st 98.6 1.6E-07 5.4E-12 62.7 7.3 74 1-90 166-239 (254)
25 1ve3_A Hypothetical protein PH 98.6 3.1E-08 1.1E-12 65.0 3.0 94 2-100 112-226 (227)
26 3dh0_A SAM dependent methyltra 98.5 5.5E-07 1.9E-11 58.9 8.8 77 1-98 114-190 (219)
27 1kpg_A CFA synthase;, cyclopro 98.5 2.9E-07 9.9E-12 62.7 7.3 86 1-89 137-228 (287)
28 3pfg_A N-methyltransferase; N, 98.5 1.7E-07 5.9E-12 63.1 6.1 95 2-99 120-247 (263)
29 3g2m_A PCZA361.24; SAM-depende 98.5 1.9E-07 6.6E-12 64.2 5.7 96 2-100 160-291 (299)
30 3ujc_A Phosphoethanolamine N-m 98.5 5E-07 1.7E-11 60.4 7.3 79 1-89 128-206 (266)
31 3h2b_A SAM-dependent methyltra 98.5 2.8E-07 9.7E-12 59.7 5.8 80 1-96 110-190 (203)
32 3lcc_A Putative methyl chlorid 98.5 2.6E-07 9E-12 61.3 5.7 69 1-90 140-208 (235)
33 3bus_A REBM, methyltransferase 98.5 3.6E-07 1.2E-11 61.7 6.3 80 1-89 137-216 (273)
34 3sm3_A SAM-dependent methyltra 98.4 4E-07 1.4E-11 59.8 5.7 82 1-88 109-206 (235)
35 1vl5_A Unknown conserved prote 98.4 2.6E-07 8.8E-12 62.2 4.8 78 1-89 111-190 (260)
36 3ocj_A Putative exported prote 98.4 1.6E-06 5.5E-11 59.8 8.6 94 2-98 196-301 (305)
37 1xxl_A YCGJ protein; structura 98.4 3.1E-07 1E-11 61.3 4.5 78 1-89 95-174 (239)
38 3e23_A Uncharacterized protein 98.4 6.4E-07 2.2E-11 58.4 5.9 72 1-89 110-182 (211)
39 3dlc_A Putative S-adenosyl-L-m 98.4 8.8E-08 3E-12 62.3 1.6 90 1-96 119-210 (219)
40 3dli_A Methyltransferase; PSI- 98.4 2.3E-06 8E-11 56.9 8.2 76 1-89 109-184 (240)
41 2fk8_A Methoxy mycolic acid sy 98.3 7.9E-07 2.7E-11 61.5 5.9 86 1-89 163-254 (318)
42 2o57_A Putative sarcosine dime 98.3 1E-06 3.5E-11 60.3 6.4 77 1-89 158-234 (297)
43 3i9f_A Putative type 11 methyl 98.3 1.8E-06 6.3E-11 54.3 6.5 74 1-97 83-156 (170)
44 3hem_A Cyclopropane-fatty-acyl 98.3 1.7E-06 5.8E-11 59.5 6.4 86 2-90 146-244 (302)
45 4fsd_A Arsenic methyltransfera 98.2 2.5E-06 8.7E-11 60.9 6.6 76 2-88 175-250 (383)
46 1y8c_A S-adenosylmethionine-de 98.2 1.9E-06 6.4E-11 56.9 5.0 84 2-89 111-225 (246)
47 3l8d_A Methyltransferase; stru 98.2 4.6E-06 1.6E-10 55.1 6.8 77 1-89 124-200 (242)
48 3e8s_A Putative SAM dependent 98.2 4.1E-06 1.4E-10 54.5 6.5 78 2-88 125-208 (227)
49 3vc1_A Geranyl diphosphate 2-C 98.2 3.8E-06 1.3E-10 58.1 6.0 76 2-89 194-269 (312)
50 1nkv_A Hypothetical protein YJ 98.2 2.7E-06 9.3E-11 56.7 5.1 76 2-89 112-187 (256)
51 2zfu_A Nucleomethylin, cerebra 98.2 3.2E-06 1.1E-10 55.2 5.3 66 2-99 124-189 (215)
52 3mgg_A Methyltransferase; NYSG 98.2 1.2E-06 4.2E-11 59.2 3.3 81 1-89 113-198 (276)
53 3d2l_A SAM-dependent methyltra 98.1 1.4E-05 4.8E-10 52.7 7.6 84 2-89 106-223 (243)
54 2p7i_A Hypothetical protein; p 98.1 1.1E-05 3.8E-10 53.1 6.8 78 1-88 111-198 (250)
55 1vlm_A SAM-dependent methyltra 98.1 1.9E-05 6.5E-10 51.8 7.8 79 1-89 110-188 (219)
56 2aot_A HMT, histamine N-methyl 98.1 1.6E-05 5.3E-10 54.5 7.4 75 1-86 143-218 (292)
57 3bkx_A SAM-dependent methyltra 98.0 2.4E-05 8.3E-10 52.7 7.5 83 1-89 130-219 (275)
58 2ld4_A Anamorsin; methyltransf 98.0 1.4E-05 4.7E-10 50.7 5.9 56 2-81 72-128 (176)
59 3f4k_A Putative methyltransfer 98.0 8.1E-06 2.8E-10 54.5 4.8 75 2-90 123-197 (257)
60 4htf_A S-adenosylmethionine-de 98.0 4E-06 1.4E-10 57.1 3.1 85 1-90 144-233 (285)
61 4e2x_A TCAB9; kijanose, tetron 98.0 3E-05 1E-09 55.5 7.6 76 1-90 179-254 (416)
62 3g5l_A Putative S-adenosylmeth 97.9 5.7E-06 1.9E-10 55.2 3.4 83 1-89 116-216 (253)
63 3kkz_A Uncharacterized protein 97.9 1.9E-05 6.3E-10 53.2 5.3 75 2-90 123-197 (267)
64 3cc8_A Putative methyltransfer 97.9 1.9E-05 6.3E-10 51.4 5.1 78 1-89 101-185 (230)
65 3cgg_A SAM-dependent methyltra 97.8 6.5E-05 2.2E-09 47.5 6.9 59 2-89 117-175 (195)
66 3giw_A Protein of unknown func 97.8 2.1E-05 7.2E-10 54.6 4.5 74 2-85 169-243 (277)
67 3bkw_A MLL3908 protein, S-aden 97.8 3.2E-05 1.1E-09 51.0 5.1 84 1-89 115-214 (243)
68 3ggd_A SAM-dependent methyltra 97.8 5.1E-05 1.8E-09 50.3 5.9 78 1-88 132-218 (245)
69 2p8j_A S-adenosylmethionine-de 97.7 2.5E-05 8.5E-10 50.4 3.2 82 1-86 97-180 (209)
70 3gu3_A Methyltransferase; alph 97.7 3.9E-05 1.3E-09 52.3 4.3 82 2-88 98-189 (284)
71 1pjz_A Thiopurine S-methyltran 97.6 0.00015 5E-09 47.3 6.0 67 2-89 110-176 (203)
72 3jwh_A HEN1; methyltransferase 97.6 0.00017 5.8E-09 47.0 6.3 76 1-86 110-189 (217)
73 3jwg_A HEN1, methyltransferase 97.6 0.00027 9.2E-09 46.0 7.2 76 1-86 110-189 (219)
74 3grz_A L11 mtase, ribosomal pr 97.6 0.0001 3.5E-09 47.6 4.7 64 6-100 133-196 (205)
75 1ri5_A MRNA capping enzyme; me 97.5 0.00014 4.7E-09 49.2 5.4 85 2-89 142-250 (298)
76 3thr_A Glycine N-methyltransfe 97.5 0.00013 4.4E-09 49.6 5.2 33 1-36 139-176 (293)
77 2xvm_A Tellurite resistance pr 97.5 9.6E-05 3.3E-09 47.1 4.4 68 1-88 105-172 (199)
78 2g72_A Phenylethanolamine N-me 97.5 7.9E-05 2.7E-09 50.8 3.7 71 2-88 183-255 (289)
79 3ccf_A Cyclopropane-fatty-acyl 97.5 0.00028 9.5E-09 47.8 6.3 78 2-89 126-210 (279)
80 2i62_A Nicotinamide N-methyltr 97.5 0.00017 5.9E-09 48.0 5.0 65 9-89 175-239 (265)
81 1fbn_A MJ fibrillarin homologu 97.5 0.00028 9.7E-09 46.6 6.0 76 2-99 147-226 (230)
82 3ege_A Putative methyltransfer 97.4 0.00028 9.4E-09 47.4 5.3 77 1-89 102-178 (261)
83 2a14_A Indolethylamine N-methy 97.4 0.0004 1.4E-08 46.8 5.9 65 9-89 174-238 (263)
84 2yqz_A Hypothetical protein TT 97.3 0.00017 5.9E-09 47.9 3.8 78 2-87 113-194 (263)
85 2p35_A Trans-aconitate 2-methy 97.3 0.00019 6.4E-09 47.7 4.0 74 2-84 104-185 (259)
86 2kw5_A SLR1183 protein; struct 97.3 0.00083 2.8E-08 43.0 6.6 68 4-88 103-170 (202)
87 3g07_A 7SK snRNA methylphospha 97.2 5.6E-05 1.9E-09 52.0 -0.0 75 5-89 193-269 (292)
88 2nxc_A L11 mtase, ribosomal pr 96.8 0.0035 1.2E-07 42.1 6.4 59 7-96 193-251 (254)
89 4df3_A Fibrillarin-like rRNA/T 96.8 0.0016 5.4E-08 44.0 4.6 68 10-99 160-230 (233)
90 1wzn_A SAM-dependent methyltra 96.8 0.0017 5.8E-08 42.9 4.7 30 2-34 115-144 (252)
91 2gb4_A Thiopurine S-methyltran 96.6 0.0044 1.5E-07 41.8 5.6 66 2-88 161-226 (252)
92 2vdw_A Vaccinia virus capping 96.5 0.0034 1.2E-07 43.5 4.6 84 2-88 138-245 (302)
93 2gs9_A Hypothetical protein TT 96.5 0.0019 6.5E-08 41.6 3.1 68 1-80 103-171 (211)
94 3m70_A Tellurite resistance pr 96.3 0.005 1.7E-07 41.6 4.4 66 2-87 193-258 (286)
95 3opn_A Putative hemolysin; str 96.1 0.0019 6.5E-08 43.2 1.4 66 12-88 117-183 (232)
96 3p2e_A 16S rRNA methylase; met 96.0 0.004 1.4E-07 41.3 2.6 67 12-90 119-186 (225)
97 3mq2_A 16S rRNA methyltransfer 95.8 0.0064 2.2E-07 39.4 3.2 65 12-89 120-184 (218)
98 2b3t_A Protein methyltransfera 95.8 0.031 1.1E-06 37.6 6.7 59 9-99 215-274 (276)
99 3e05_A Precorrin-6Y C5,15-meth 95.8 0.019 6.5E-07 36.7 5.3 46 5-81 115-160 (204)
100 2ipx_A RRNA 2'-O-methyltransfe 95.6 0.013 4.3E-07 38.5 3.9 68 8-98 158-229 (233)
101 1g8a_A Fibrillarin-like PRE-rR 95.6 0.057 1.9E-06 35.0 6.9 74 3-99 148-225 (227)
102 1zx0_A Guanidinoacetate N-meth 95.3 0.0033 1.1E-07 41.4 0.2 64 3-83 141-204 (236)
103 3g5t_A Trans-aconitate 3-methy 95.1 0.012 4E-07 40.1 2.6 73 2-82 122-197 (299)
104 3hp7_A Hemolysin, putative; st 95.0 0.011 3.7E-07 41.1 2.2 66 12-88 165-231 (291)
105 3bgv_A MRNA CAP guanine-N7 met 95.0 0.035 1.2E-06 38.0 4.7 85 2-89 123-232 (313)
106 3orh_A Guanidinoacetate N-meth 94.6 0.0055 1.9E-07 40.7 -0.2 62 8-86 146-207 (236)
107 3ofk_A Nodulation protein S; N 94.3 0.029 9.9E-07 36.0 2.8 33 1-36 122-155 (216)
108 1af7_A Chemotaxis receptor met 94.0 0.024 8.3E-07 38.9 2.0 30 1-33 221-250 (274)
109 3id6_C Fibrillarin-like rRNA/T 93.8 0.13 4.6E-06 34.4 5.4 75 2-98 150-228 (232)
110 3m33_A Uncharacterized protein 93.8 0.014 4.6E-07 38.2 0.4 21 68-88 146-166 (226)
111 3bwc_A Spermidine synthase; SA 93.7 0.15 5.2E-06 35.1 5.7 51 12-89 190-240 (304)
112 3iei_A Leucine carboxyl methyl 93.5 0.34 1.2E-05 34.2 7.2 78 2-89 200-281 (334)
113 1rjd_A PPM1P, carboxy methyl t 93.5 0.22 7.5E-06 35.0 6.2 75 2-82 203-281 (334)
114 4dzr_A Protein-(glutamine-N5) 93.4 0.11 3.9E-06 32.8 4.3 48 12-90 144-193 (215)
115 2h00_A Methyltransferase 10 do 93.0 0.0017 5.8E-08 43.3 -5.1 67 12-89 172-238 (254)
116 3evz_A Methyltransferase; NYSG 92.9 0.25 8.7E-06 31.8 5.5 51 11-91 158-208 (230)
117 3b5i_A S-adenosyl-L-methionine 92.6 0.4 1.4E-05 34.3 6.6 75 10-88 203-297 (374)
118 1dus_A MJ0882; hypothetical pr 92.1 0.17 5.8E-06 31.3 3.7 62 6-99 131-192 (194)
119 3lpm_A Putative methyltransfer 91.8 0.47 1.6E-05 31.4 5.9 59 9-99 153-217 (259)
120 1l3i_A Precorrin-6Y methyltran 91.4 0.14 4.9E-06 31.6 2.8 44 10-84 112-155 (192)
121 2uyo_A Hypothetical protein ML 91.2 0.38 1.3E-05 33.5 5.1 78 1-84 187-274 (310)
122 3htx_A HEN1; HEN1, small RNA m 90.8 1.4 4.8E-05 35.3 8.3 32 1-36 804-835 (950)
123 3mb5_A SAM-dependent methyltra 90.7 0.081 2.8E-06 34.8 1.2 55 2-89 166-222 (255)
124 3q87_B N6 adenine specific DNA 90.7 1.4 4.6E-05 27.3 6.9 48 10-89 102-149 (170)
125 3eey_A Putative rRNA methylase 90.4 0.18 6E-06 31.8 2.6 27 9-38 116-142 (197)
126 4hg2_A Methyltransferase type 89.4 0.22 7.4E-06 33.6 2.5 32 2-39 108-139 (257)
127 1nt2_A Fibrillarin-like PRE-rR 89.2 0.9 3.1E-05 29.3 5.3 23 9-34 138-160 (210)
128 3r3h_A O-methyltransferase, SA 89.1 0.63 2.2E-05 30.8 4.6 32 5-39 143-174 (242)
129 2pwy_A TRNA (adenine-N(1)-)-me 89.1 0.14 4.8E-06 33.5 1.4 53 3-88 171-223 (258)
130 2hnk_A SAM-dependent O-methylt 88.7 0.48 1.7E-05 30.9 3.8 33 3-38 152-184 (239)
131 2efj_A 3,7-dimethylxanthine me 88.5 1.5 5.2E-05 31.5 6.5 73 12-87 205-290 (384)
132 3duw_A OMT, O-methyltransferas 88.0 0.51 1.8E-05 30.2 3.5 33 3-38 138-170 (223)
133 3uwp_A Histone-lysine N-methyl 87.9 0.48 1.6E-05 34.8 3.6 32 9-43 265-296 (438)
134 1yb2_A Hypothetical protein TA 87.9 0.14 5E-06 34.3 0.8 51 5-88 186-236 (275)
135 2pxx_A Uncharacterized protein 87.7 0.18 6.2E-06 31.8 1.2 28 8-38 135-162 (215)
136 1m6e_X S-adenosyl-L-methionnin 87.6 3.4 0.00012 29.4 7.8 74 10-86 187-277 (359)
137 1o54_A SAM-dependent O-methylt 87.6 0.28 9.5E-06 32.9 2.1 46 12-88 193-238 (277)
138 3njr_A Precorrin-6Y methylase; 87.4 0.96 3.3E-05 28.9 4.5 43 14-87 136-178 (204)
139 3tfw_A Putative O-methyltransf 87.3 0.64 2.2E-05 30.7 3.7 33 3-38 141-173 (248)
140 2zwa_A Leucine carboxyl methyl 87.0 6.4 0.00022 29.9 9.5 80 2-88 226-308 (695)
141 2avn_A Ubiquinone/menaquinone 86.5 0.21 7E-06 33.1 0.9 81 3-90 124-214 (260)
142 3iv6_A Putative Zn-dependent a 86.3 0.74 2.5E-05 31.2 3.7 31 2-36 119-149 (261)
143 3tr6_A O-methyltransferase; ce 84.8 0.37 1.3E-05 30.9 1.5 34 3-39 145-178 (225)
144 2frn_A Hypothetical protein PH 84.6 1.9 6.6E-05 29.0 5.1 50 11-85 204-253 (278)
145 1yzh_A TRNA (guanine-N(7)-)-me 84.4 2 6.7E-05 27.3 4.9 20 12-34 136-155 (214)
146 2pjd_A Ribosomal RNA small sub 83.3 0.38 1.3E-05 33.4 1.1 28 6-36 277-304 (343)
147 2b25_A Hypothetical protein; s 83.2 0.021 7.1E-07 39.7 -5.4 72 13-89 200-281 (336)
148 1o9g_A RRNA methyltransferase; 81.4 2.2 7.4E-05 27.9 4.3 27 8-37 190-216 (250)
149 1xdz_A Methyltransferase GIDB; 81.0 1.2 4.1E-05 29.0 2.9 49 11-88 153-201 (240)
150 3c3p_A Methyltransferase; NP_9 80.0 0.43 1.5E-05 30.4 0.4 33 3-38 131-163 (210)
151 3mti_A RRNA methylase; SAM-dep 79.4 0.99 3.4E-05 27.9 2.0 58 9-89 112-169 (185)
152 3aaf_A Werner syndrome ATP-dep 78.9 0.97 3.3E-05 27.6 1.8 71 5-86 13-87 (134)
153 2xyq_A Putative 2'-O-methyl tr 78.8 1.1 3.9E-05 30.8 2.3 23 10-35 149-171 (290)
154 1u2z_A Histone-lysine N-methyl 78.7 1.8 6E-05 31.6 3.3 30 9-41 336-365 (433)
155 3bzb_A Uncharacterized protein 78.7 5.1 0.00018 26.8 5.5 23 11-34 179-204 (281)
156 3ntv_A MW1564 protein; rossman 78.6 0.39 1.3E-05 31.3 -0.1 33 3-38 147-179 (232)
157 3hm2_A Precorrin-6Y C5,15-meth 77.9 1.7 6E-05 26.3 2.8 22 12-36 107-128 (178)
158 3fpn_B Geobacillus stearotherm 77.7 1.7 5.8E-05 25.5 2.5 41 60-100 16-60 (106)
159 2avd_A Catechol-O-methyltransf 77.1 0.89 3E-05 29.1 1.3 32 4-38 151-182 (229)
160 1sui_A Caffeoyl-COA O-methyltr 76.5 1.9 6.6E-05 28.4 2.8 30 5-37 163-192 (247)
161 2gpy_A O-methyltransferase; st 76.2 0.49 1.7E-05 30.7 -0.2 31 4-37 132-162 (233)
162 3fpf_A Mtnas, putative unchara 76.2 2.6 9E-05 29.2 3.5 23 10-35 200-222 (298)
163 1ixk_A Methyltransferase; open 76.0 1.5 5.2E-05 30.1 2.3 25 12-39 226-250 (315)
164 3cbg_A O-methyltransferase; cy 75.9 0.99 3.4E-05 29.4 1.3 32 4-38 154-185 (232)
165 2nyu_A Putative ribosomal RNA 75.7 1.5 5E-05 27.3 2.0 22 12-36 125-146 (196)
166 1ssz_A Pulmonary surfactant-as 75.3 1.5 5E-05 20.0 1.4 19 11-32 4-22 (34)
167 3c3y_A Pfomt, O-methyltransfer 75.2 1.4 4.7E-05 28.9 1.8 31 3-36 152-182 (237)
168 2qy6_A UPF0209 protein YFCK; s 75.1 2.8 9.6E-05 28.2 3.4 27 63-89 206-235 (257)
169 3p9n_A Possible methyltransfer 74.5 5.6 0.00019 24.6 4.5 29 6-37 125-155 (189)
170 1ej0_A FTSJ; methyltransferase 74.1 2.2 7.6E-05 25.5 2.5 23 12-37 116-138 (180)
171 3dr5_A Putative O-methyltransf 73.6 0.7 2.4E-05 30.1 0.1 33 3-38 134-166 (221)
172 1whz_A Hypothetical protein; a 71.2 4.5 0.00016 21.5 3.1 20 67-86 5-24 (70)
173 2cz4_A Hypothetical protein TT 71.2 7.2 0.00025 23.3 4.2 27 7-36 82-110 (119)
174 3ajd_A Putative methyltransfer 70.2 3.1 0.0001 27.8 2.7 25 12-39 191-215 (274)
175 3sso_A Methyltransferase; macr 68.9 1.8 6.1E-05 31.6 1.3 31 3-38 297-327 (419)
176 2vz8_A Fatty acid synthase; tr 68.5 1.5 5.2E-05 38.4 1.0 67 11-87 1327-1393(2512)
177 2plw_A Ribosomal RNA methyltra 67.8 3.7 0.00013 25.5 2.5 21 12-35 134-154 (201)
178 2bm8_A Cephalosporin hydroxyla 67.3 4.1 0.00014 26.6 2.8 24 10-36 164-188 (236)
179 2dwf_A Pulmonary surfactant-as 67.0 2.8 9.6E-05 19.5 1.3 18 11-31 4-21 (34)
180 2qm3_A Predicted methyltransfe 66.7 4.7 0.00016 28.2 3.1 25 11-38 256-280 (373)
181 2yxl_A PH0851 protein, 450AA l 66.1 1.7 5.7E-05 31.5 0.7 25 12-39 369-393 (450)
182 2yxd_A Probable cobalt-precorr 65.7 13 0.00045 22.2 4.8 18 69-86 137-154 (183)
183 2frx_A Hypothetical protein YE 65.3 4.9 0.00017 29.5 3.1 25 12-39 226-250 (479)
184 2vdv_E TRNA (guanine-N(7)-)-me 63.5 1.9 6.4E-05 28.2 0.5 20 12-34 153-172 (246)
185 3dou_A Ribosomal RNA large sub 63.4 3.2 0.00011 26.3 1.6 23 11-36 118-140 (191)
186 2y1w_A Histone-arginine methyl 63.1 1.3 4.6E-05 30.8 -0.3 30 2-34 125-154 (348)
187 2fca_A TRNA (guanine-N(7)-)-me 63.1 5.5 0.00019 25.4 2.7 21 12-35 133-153 (213)
188 2hiy_A Hypothetical protein; C 61.4 8.4 0.00029 24.7 3.3 31 61-91 15-46 (183)
189 3cxj_A Uncharacterized protein 59.7 6.5 0.00022 25.0 2.5 30 68-97 4-33 (165)
190 3m6w_A RRNA methylase; rRNA me 59.5 4.5 0.00015 29.7 1.9 24 12-38 209-232 (464)
191 2p41_A Type II methyltransfera 59.4 12 0.00041 25.6 4.0 19 12-33 171-189 (305)
192 3dmg_A Probable ribosomal RNA 58.7 5.5 0.00019 28.3 2.2 26 7-35 315-340 (381)
193 1sqg_A SUN protein, FMU protei 58.6 3.6 0.00012 29.4 1.3 25 12-39 354-378 (429)
194 4dcm_A Ribosomal RNA large sub 58.2 3.6 0.00012 29.1 1.3 27 6-35 308-334 (375)
195 3u81_A Catechol O-methyltransf 57.2 8.1 0.00028 24.5 2.8 23 12-38 151-173 (221)
196 3b3j_A Histone-arginine methyl 56.5 1.9 6.4E-05 31.7 -0.5 28 3-33 234-261 (480)
197 2ozv_A Hypothetical protein AT 55.8 3.1 0.00011 27.6 0.6 22 10-34 148-169 (260)
198 1cee_B Wiskott-aldrich syndrom 55.4 2.9 9.9E-05 22.0 0.3 19 68-86 34-52 (59)
199 2lnh_A N-WAsp, neural wiskott- 55.0 3.5 0.00012 22.2 0.6 18 68-85 23-40 (65)
200 1inl_A Spermidine synthase; be 53.9 3 0.0001 28.4 0.3 20 12-34 185-204 (296)
201 2lmc_A Bacterial RNA polymeras 53.7 18 0.00062 20.1 3.3 25 66-90 53-81 (84)
202 2yvl_A TRMI protein, hypotheti 52.8 9.1 0.00031 24.5 2.4 22 12-36 170-191 (248)
203 3adn_A Spermidine synthase; am 52.2 5.4 0.00019 27.2 1.3 21 12-35 178-198 (294)
204 3ckk_A TRNA (guanine-N(7)-)-me 52.1 5.2 0.00018 26.2 1.2 20 12-34 148-167 (235)
205 3tka_A Ribosomal RNA small sub 51.0 7.4 0.00025 27.7 1.9 26 10-38 252-277 (347)
206 3n1g_B Desert hedgehog protein 50.9 43 0.0015 21.3 5.3 80 8-92 81-162 (170)
207 1wg8_A Predicted S-adenosylmet 50.6 7.7 0.00026 26.8 1.9 27 10-39 211-237 (285)
208 2km1_A Protein DRE2; yeast, an 50.5 8.9 0.00031 23.6 2.0 19 12-33 78-96 (136)
209 3ouv_A Serine/threonine protei 50.3 26 0.00089 18.2 4.7 20 67-86 16-35 (71)
210 3dxy_A TRNA (guanine-N(7)-)-me 50.2 5.9 0.0002 25.6 1.2 20 13-35 131-150 (218)
211 3i31_A Heat resistant RNA depe 49.2 34 0.0012 19.4 4.1 27 63-89 19-45 (88)
212 2eg2_A Nitrogen regulatory pro 48.9 22 0.00075 20.5 3.5 30 7-36 66-96 (112)
213 3lap_A Arginine repressor; arg 48.9 8 0.00027 24.6 1.6 24 62-85 30-53 (170)
214 3hjh_A Transcription-repair-co 48.1 12 0.0004 27.6 2.6 41 60-100 129-173 (483)
215 2g7j_A Putative cytoplasmic pr 47.8 20 0.0007 21.3 3.1 20 68-87 4-23 (124)
216 1p91_A Ribosomal RNA large sub 47.2 6.9 0.00024 25.5 1.2 21 14-37 160-180 (269)
217 2gw8_A PII signal transduction 47.1 19 0.00064 20.9 3.0 30 7-36 68-98 (114)
218 2h80_A STAR-related lipid tran 47.0 7.4 0.00025 21.7 1.1 20 65-84 17-36 (81)
219 1f3m_A Serine/threonine-protei 46.5 10 0.00035 21.1 1.6 21 66-86 28-48 (80)
220 1jsx_A Glucose-inhibited divis 46.4 4.9 0.00017 25.1 0.3 21 11-34 144-164 (207)
221 2rbg_A Putative uncharacterize 46.2 13 0.00045 22.4 2.1 29 3-35 67-95 (126)
222 2jso_A Polymyxin resistance pr 46.2 16 0.00054 20.7 2.4 19 62-80 67-85 (88)
223 3ncq_A Nitrogen regulatory pro 45.4 27 0.00091 20.7 3.5 30 7-36 66-96 (119)
224 2cmg_A Spermidine synthase; tr 44.8 6.7 0.00023 26.2 0.8 27 3-34 144-170 (262)
225 1lfp_A Hypothetical protein AQ 44.0 16 0.00053 24.8 2.5 14 27-40 92-105 (249)
226 1ej5_A WAsp, wiskott-aldrich s 44.0 13 0.00045 21.9 1.9 18 68-85 22-39 (107)
227 1i9g_A Hypothetical protein RV 43.8 5.9 0.0002 26.0 0.4 22 12-36 183-204 (280)
228 1b33_N Phycobilisome 7.8 KD li 43.4 31 0.0011 18.6 3.2 58 29-91 1-58 (67)
229 2c71_A Glycoside hydrolase, fa 43.2 20 0.00069 23.1 2.9 30 4-36 127-157 (216)
230 4aff_A Nitrogen regulatory pro 43.0 29 0.00099 20.4 3.4 30 7-36 66-96 (116)
231 4f3q_A Transcriptional regulat 42.7 13 0.00045 25.1 2.0 20 67-86 149-168 (247)
232 2j9c_A GLNK1, hypothetical nit 42.6 22 0.00077 20.8 2.9 30 7-36 68-98 (119)
233 2i7c_A Spermidine synthase; tr 42.4 9.7 0.00033 25.6 1.4 20 12-34 172-191 (283)
234 2igt_A SAM dependent methyltra 42.4 27 0.00093 24.1 3.7 24 10-36 250-273 (332)
235 1uir_A Polyamine aminopropyltr 42.3 9.6 0.00033 26.1 1.3 22 11-35 174-195 (314)
236 3mhy_A PII-like protein PZ; PI 42.2 27 0.00092 20.3 3.1 30 7-36 66-96 (112)
237 3t9z_A GLNK3, nitrogen regulat 42.1 32 0.0011 20.3 3.5 30 7-36 66-96 (118)
238 2o66_A PII protein; regulation 41.8 24 0.00084 21.4 3.0 30 7-36 79-109 (135)
239 1kon_A Protein YEBC, YEBC; alp 41.5 16 0.00053 24.8 2.2 14 27-40 95-108 (249)
240 1mjf_A Spermidine synthase; sp 41.5 10 0.00035 25.4 1.4 20 12-34 173-192 (281)
241 1x8d_A Hypothetical protein YI 39.9 43 0.0015 19.3 3.7 30 69-98 26-58 (104)
242 3k7i_B IHH, HHG-2, indian hedg 39.9 75 0.0025 20.5 5.4 76 11-91 92-169 (187)
243 1m6y_A S-adenosyl-methyltransf 39.8 11 0.00038 25.9 1.3 26 9-37 222-247 (301)
244 3v4g_A Arginine repressor; vib 38.7 13 0.00045 23.9 1.4 22 62-83 43-64 (180)
245 1ny8_A Protein YRBA; structure 38.7 21 0.00071 20.6 2.2 18 65-82 73-90 (97)
246 3tma_A Methyltransferase; thum 38.5 37 0.0013 23.2 3.9 21 12-35 297-317 (354)
247 3l7p_A Putative nitrogen regul 38.2 35 0.0012 20.0 3.2 30 7-36 69-99 (115)
248 3gjy_A Spermidine synthase; AP 38.1 12 0.00042 26.0 1.4 22 12-36 180-201 (317)
249 4fzv_A Putative methyltransfer 38.1 9.8 0.00034 26.9 0.9 26 12-40 264-289 (359)
250 2d7d_A Uvrabc system protein B 37.9 24 0.0008 26.9 3.0 43 58-100 158-204 (661)
251 3lvj_C Sulfurtransferase TUSA; 37.4 47 0.0016 18.0 3.5 27 68-94 49-75 (82)
252 1mw7_A Hypothetical protein HP 37.3 16 0.00054 24.6 1.7 23 61-83 98-121 (240)
253 1xj5_A Spermidine synthase 1; 36.7 12 0.00041 26.0 1.1 21 11-34 214-234 (334)
254 2fi0_A Conserved domain protei 36.6 30 0.001 18.9 2.6 18 67-84 61-78 (81)
255 1iy9_A Spermidine synthase; ro 36.5 13 0.00043 24.9 1.2 20 12-34 169-188 (275)
256 2pt6_A Spermidine synthase; tr 36.3 12 0.00042 25.7 1.1 20 12-34 210-229 (321)
257 2b2c_A Spermidine synthase; be 36.3 11 0.00036 26.0 0.8 21 12-35 202-222 (314)
258 3lec_A NADB-rossmann superfami 36.2 45 0.0015 22.0 3.8 33 67-99 127-162 (230)
259 2yxe_A Protein-L-isoaspartate 36.2 13 0.00046 23.1 1.2 17 16-35 161-177 (215)
260 3t7v_A Methylornithine synthas 36.1 19 0.00064 24.8 2.0 20 66-85 321-340 (350)
261 2o07_A Spermidine synthase; st 36.0 12 0.0004 25.6 1.0 22 11-35 188-209 (304)
262 2dky_A RHO-GTPase-activating p 35.7 12 0.0004 21.3 0.8 19 66-84 20-38 (91)
263 3lbf_A Protein-L-isoaspartate 35.7 13 0.00045 23.1 1.1 17 17-36 159-175 (210)
264 1wxx_A TT1595, hypothetical pr 35.6 21 0.00072 24.9 2.3 25 9-36 302-326 (382)
265 1vfj_A Nitrogen regulatory pro 35.3 41 0.0014 19.4 3.2 30 7-36 66-96 (116)
266 2as0_A Hypothetical protein PH 34.9 20 0.00068 25.1 2.0 25 9-36 312-336 (396)
267 1nv8_A HEMK protein; class I a 34.4 16 0.00054 24.6 1.4 19 12-33 228-247 (284)
268 1vbf_A 231AA long hypothetical 34.4 16 0.00055 23.1 1.4 17 17-36 150-166 (231)
269 2ns1_B Nitrogen regulatory pro 34.2 34 0.0012 19.9 2.7 30 7-36 70-100 (116)
270 3dfe_A Putative PII-like signa 33.9 58 0.002 19.0 3.7 28 7-36 69-97 (111)
271 1jdq_A TM006 protein, hypothet 33.0 67 0.0023 18.2 3.8 27 68-94 65-92 (98)
272 1mhm_B Adometdc, samdc, S-aden 32.8 62 0.0021 17.6 4.1 28 64-91 37-64 (72)
273 1b4a_A Arginine repressor; hel 32.8 21 0.00071 22.1 1.6 23 63-85 16-38 (149)
274 3g89_A Ribosomal RNA small sub 31.8 15 0.00052 24.1 0.9 49 12-89 164-212 (249)
275 2eyq_A TRCF, transcription-rep 31.5 28 0.00095 28.4 2.5 43 58-100 130-176 (1151)
276 1hwu_A PII protein; herbaspiri 31.3 53 0.0018 18.8 3.2 30 7-36 66-96 (112)
277 1yg0_A COP associated protein; 31.3 29 0.001 16.5 1.9 16 68-83 50-65 (66)
278 1b0n_B Protein (SINI protein); 30.7 8.5 0.00029 20.1 -0.4 19 68-86 11-32 (57)
279 2jvr_A Nucleolar protein 3; RN 30.6 79 0.0027 18.0 4.0 35 64-98 37-74 (111)
280 3a27_A TYW2, uncharacterized p 30.4 12 0.0004 25.0 0.2 27 10-39 197-223 (272)
281 3k6r_A Putative transferase PH 29.9 53 0.0018 22.2 3.4 49 11-84 204-252 (278)
282 2qif_A Copper chaperone COPZ; 29.8 38 0.0013 16.0 2.2 18 67-84 51-68 (69)
283 1je3_A EC005, hypothetical 8.6 29.3 47 0.0016 18.8 2.7 27 68-94 66-92 (97)
284 2bh1_A General secretion pathw 29.3 50 0.0017 22.0 3.2 21 68-88 117-137 (250)
285 3m4x_A NOL1/NOP2/SUN family pr 29.2 24 0.00082 25.8 1.7 24 12-38 214-237 (456)
286 2oxt_A Nucleoside-2'-O-methylt 29.2 24 0.00082 23.5 1.6 21 13-36 164-186 (265)
287 2zig_A TTHA0409, putative modi 29.1 27 0.00092 23.5 1.9 20 12-34 77-96 (297)
288 1x4c_A Splicing factor, argini 28.8 78 0.0027 17.4 4.1 34 64-98 24-57 (108)
289 2yh5_A DAPX protein, BAMC; lip 28.7 27 0.00094 20.9 1.6 32 61-92 19-50 (127)
290 2wbr_A GW182, gawky, LD47780P; 28.6 81 0.0028 17.7 3.6 34 64-98 16-50 (89)
291 1i1n_A Protein-L-isoaspartate 28.5 9.3 0.00032 24.2 -0.6 21 13-36 163-183 (226)
292 4dmg_A Putative uncharacterize 27.7 30 0.001 24.5 2.0 25 11-38 305-329 (393)
293 2ift_A Putative methylase HI07 27.5 22 0.00075 22.2 1.1 25 10-37 139-165 (201)
294 4a2a_A Cell division protein F 27.4 65 0.0022 23.0 3.7 80 5-88 105-189 (419)
295 3hz7_A Uncharacterized protein 27.2 53 0.0018 18.1 2.6 26 68-93 41-66 (87)
296 1wwu_A Hypothetical protein FL 27.0 37 0.0013 19.7 1.9 24 66-89 23-46 (99)
297 3lcv_B Sisomicin-gentamicin re 26.9 41 0.0014 23.2 2.4 66 3-91 208-273 (281)
298 3ce8_A Putative PII-like nitro 26.7 70 0.0024 19.0 3.2 26 7-35 86-112 (120)
299 3qr3_A Endoglucanase EG-II; TI 26.5 40 0.0014 23.4 2.4 24 63-86 39-62 (340)
300 2cok_A Poly [ADP-ribose] polym 26.3 63 0.0022 18.9 2.9 27 60-86 17-43 (113)
301 3gge_A PDZ domain-containing p 26.0 71 0.0024 18.1 3.0 16 3-18 61-76 (95)
302 3a1y_A 50S ribosomal protein P 25.8 39 0.0013 17.4 1.7 24 62-85 12-35 (58)
303 3kr9_A SAM-dependent methyltra 25.8 78 0.0027 20.7 3.6 33 67-99 121-156 (225)
304 3beg_B Splicing factor, argini 25.4 79 0.0027 17.7 3.3 33 65-98 26-58 (115)
305 2qlw_A RHAU; mutarotase, isome 25.4 1.1E+02 0.0036 18.9 3.9 30 70-99 67-99 (144)
306 1jg1_A PIMT;, protein-L-isoasp 25.3 26 0.0009 22.3 1.2 17 16-35 173-189 (235)
307 1ws6_A Methyltransferase; stru 25.1 37 0.0013 19.9 1.8 16 19-37 134-149 (171)
308 3bzq_A Nitrogen regulatory pro 25.0 50 0.0017 18.9 2.3 30 7-36 68-98 (114)
309 3m3h_A OPRT, oprtase, orotate 25.0 1.2E+02 0.004 20.0 4.4 16 27-42 136-151 (234)
310 2pbf_A Protein-L-isoaspartate 24.8 12 0.00041 23.6 -0.5 20 14-36 175-194 (227)
311 2esr_A Methyltransferase; stru 24.6 46 0.0016 19.8 2.2 25 10-37 114-140 (177)
312 2b49_A Protein tyrosine phosph 24.6 88 0.003 21.0 3.8 29 4-35 181-216 (287)
313 2fyt_A Protein arginine N-meth 24.5 25 0.00085 24.2 1.0 21 9-32 148-168 (340)
314 2l69_A Rossmann 2X3 fold prote 24.5 52 0.0018 19.1 2.2 25 63-87 9-33 (134)
315 2kue_A PKNB, serine/threonine- 24.4 1.1E+02 0.0039 17.9 4.0 19 66-84 83-101 (138)
316 2d8c_A Phosphatidylcholine:cer 24.3 30 0.001 19.7 1.2 20 64-83 17-36 (97)
317 3r0q_C Probable protein argini 24.3 16 0.00056 25.5 0.1 25 10-37 147-171 (376)
318 4ed9_A CAIB/BAIF family protei 24.1 44 0.0015 23.8 2.2 23 65-87 303-325 (385)
319 2agk_A 1-(5-phosphoribosyl)-5- 24.1 41 0.0014 22.5 2.0 72 4-81 149-230 (260)
320 1xk7_A Crotonobetainyl-COA:car 23.9 39 0.0013 24.2 2.0 24 65-88 304-327 (408)
321 3jva_A Dipeptide epimerase; en 23.8 1.8E+02 0.0062 20.0 5.9 27 61-87 238-264 (354)
322 3vyw_A MNMC2; tRNA wobble urid 23.7 1.1E+02 0.0037 21.2 4.1 23 69-91 228-250 (308)
323 2wa2_A Non-structural protein 23.6 35 0.0012 22.9 1.6 21 12-35 171-193 (276)
324 2roe_A Heavy metal binding pro 23.5 57 0.002 15.7 2.2 19 67-85 46-64 (66)
325 4h62_V Mediator of RNA polymer 23.4 59 0.002 14.2 2.2 17 5-21 8-24 (31)
326 1lh0_A OMP synthase; loop clos 23.3 1.4E+02 0.0049 19.0 4.5 61 27-89 117-184 (213)
327 2kuf_A PKNB, serine/threonine- 23.3 55 0.0019 19.3 2.3 22 65-86 80-101 (139)
328 3htu_A Vacuolar protein-sortin 23.2 50 0.0017 18.3 1.9 19 64-82 2-24 (79)
329 1l7b_A DNA ligase; BRCT, autos 23.0 74 0.0025 17.7 2.7 28 60-87 14-41 (92)
330 1cc8_A Protein (metallochapero 22.8 82 0.0028 15.6 3.2 20 67-86 51-70 (73)
331 3czq_A Putative polyphosphate 22.6 48 0.0016 23.0 2.1 22 14-38 132-153 (304)
332 3flh_A Uncharacterized protein 22.4 86 0.0029 17.9 3.0 25 58-82 74-99 (124)
333 3dez_A OPRT, oprtase, orotate 22.2 1.4E+02 0.0048 19.7 4.4 16 27-42 148-163 (243)
334 4a4j_A Pacszia, cation-transpo 22.2 75 0.0026 15.5 2.5 19 66-84 49-67 (69)
335 2rhq_B Phenylalanyl-tRNA synth 22.1 1.8E+02 0.0061 22.8 5.5 24 68-91 17-40 (795)
336 2fpo_A Methylase YHHF; structu 22.1 42 0.0014 20.9 1.7 24 11-37 137-162 (202)
337 3gnl_A Uncharacterized protein 21.8 88 0.003 20.8 3.3 32 68-99 128-162 (244)
338 2e8m_A Epidermal growth factor 21.8 31 0.0011 20.0 0.9 23 66-88 33-55 (99)
339 2joe_A Hypothetical lipoprotei 21.7 70 0.0024 19.5 2.6 23 64-86 110-132 (139)
340 3fpn_A Geobacillus stearotherm 21.6 68 0.0023 19.0 2.4 46 13-86 8-53 (119)
341 2lxi_A RNA-binding protein 10; 21.5 40 0.0014 18.2 1.3 23 64-86 10-32 (91)
342 2f3n_A SH3 and multiple ankyri 21.5 67 0.0023 17.0 2.2 18 66-83 4-21 (76)
343 3mf7_A CIS-3-chloroacrylic aci 21.2 90 0.0031 19.0 3.0 67 5-77 11-83 (149)
344 3ues_A Alpha-1,3/4-fucosidase; 21.0 73 0.0025 23.5 3.0 25 62-86 57-81 (478)
345 3fry_A Probable copper-exporti 21.0 71 0.0024 16.0 2.2 17 68-84 50-66 (73)
346 4acf_A Glutamine synthetase 1; 20.9 98 0.0034 22.7 3.6 28 62-89 7-34 (486)
347 3ubm_A COAT2, formyl-COA:oxala 20.8 55 0.0019 23.9 2.2 23 65-87 356-378 (456)
348 3ik4_A Mandelate racemase/muco 20.7 2.2E+02 0.0074 19.7 6.4 73 5-87 197-270 (365)
349 1dl5_A Protein-L-isoaspartate 20.5 39 0.0013 22.8 1.4 18 16-36 159-176 (317)
350 3i4k_A Muconate lactonizing en 20.5 1.9E+02 0.0066 20.1 5.0 28 61-88 249-276 (383)
351 2cc0_A Acetyl-xylan esterase; 20.4 59 0.002 20.3 2.1 57 4-89 129-185 (195)
352 1cpz_A Protein (COPZ); copper 20.1 72 0.0025 15.0 2.1 18 67-84 49-66 (68)
353 1jl0_A Adometdc, S-adenosylmet 20.0 1.3E+02 0.0046 21.1 4.0 27 65-91 33-59 (334)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.95 E-value=2.3e-27 Score=169.15 Aligned_cols=94 Identities=20% Similarity=0.423 Sum_probs=86.6
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+|||||+|++|++||++|+++|+ |||+|+|+|.++++++..+ .....+|+.||+.++|++||.+||++||++||
T Consensus 252 ~vlh~~~d~~~~~iL~~~~~al~---pgg~lli~e~~~~~~~~~~---~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AG 325 (353)
T 4a6d_A 252 RVLHDWADGKCSHLLERIYHTCK---PGGGILVIESLLDEDRRGP---LLTQLYSLNMLVQTEGQERTPTHYHMLLSSAG 325 (353)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHCC---TTCEEEEEECCCCTTSCCC---HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHT
T ss_pred eecccCCHHHHHHHHHHHHhhCC---CCCEEEEEEeeeCCCCCCC---HHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCC
Confidence 58999999999999999999999 9999999999998776553 24567899999999999999999999999999
Q ss_pred CceeEEEecCCcceEEEEeC
Q 040309 81 FSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 81 f~~~~v~~~~~~~~vie~~p 100 (100)
|+.++++++++..++|++++
T Consensus 326 f~~v~v~~~~~~~~~i~ArK 345 (353)
T 4a6d_A 326 FRDFQFKKTGAIYDAILARK 345 (353)
T ss_dssp CEEEEEECCSSSCEEEEEEC
T ss_pred CceEEEEEcCCceEEEEEEe
Confidence 99999999999999999985
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.88 E-value=2.4e-22 Score=143.73 Aligned_cols=97 Identities=30% Similarity=0.485 Sum_probs=85.1
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhccc-ccCceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVS-LFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~-~~~g~~rt~~e~~~ll~~a 79 (100)
+|||+|+|+++.++|++++++|+ |||+|+|+|.+.++.....+.......+|+.|+. ..+|++||.+||+++|++|
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~---pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~A 343 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALP---AHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGA 343 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSC---TTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHT
T ss_pred HHhccCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHC
Confidence 58999999999999999999999 9999999999998765543222334578999985 5689999999999999999
Q ss_pred CCceeEEEecCCcceEEEEeC
Q 040309 80 GFSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 80 Gf~~~~v~~~~~~~~vie~~p 100 (100)
||+.+++.++.+..++||++|
T Consensus 344 GF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 344 GFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp TCCEEEEEEEETTEEEEEEEC
T ss_pred CCceEEEEEcCCceEEEEEeC
Confidence 999999999999999999987
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.87 E-value=1.2e-21 Score=140.23 Aligned_cols=97 Identities=30% Similarity=0.526 Sum_probs=85.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccc-cCceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSL-FRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~-~~g~~rt~~e~~~ll~~a 79 (100)
++||+|+|+++.++|++++++|+ |||+|+|+|.+.++....++.......+|+.|+.. .+|++||.+||+++|++|
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~A 345 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAALP---DHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMAS 345 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHHSC---TTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHT
T ss_pred chhhcCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHC
Confidence 58999999999999999999999 99999999999987655433223445789998875 489999999999999999
Q ss_pred CCceeEEEecCCcceEEEEeC
Q 040309 80 GFSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 80 Gf~~~~v~~~~~~~~vie~~p 100 (100)
||+.+++.+..+..++||++|
T Consensus 346 GF~~v~~~~~~~~~~vie~~k 366 (368)
T 3reo_A 346 GFRGFKVASCAFNTYVMEFLK 366 (368)
T ss_dssp TCCEEEEEEEETTEEEEEEEC
T ss_pred CCeeeEEEEeCCCcEEEEEEe
Confidence 999999999988999999986
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.83 E-value=1.7e-20 Score=132.99 Aligned_cols=93 Identities=31% Similarity=0.617 Sum_probs=83.9
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
++||+|+|+++.++|++++++|+ |||+|+|.|.+.++...+ .....+|+.|+...+|++||.+||+++|++||
T Consensus 255 ~vlh~~~d~~~~~~L~~~~~~Lk---pgG~l~i~e~~~~~~~~~----~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aG 327 (348)
T 3lst_A 255 RILHNWGDEDSVRILTNCRRVMP---AHGRVLVIDAVVPEGNDA----HQSKEMDFMMLAARTGQERTAAELEPLFTAAG 327 (348)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTCC---TTCEEEEEECCBCSSSSC----CHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTT
T ss_pred hhccCCCHHHHHHHHHHHHHhcC---CCCEEEEEEeccCCCCCc----chhhhcChhhhhcCCCcCCCHHHHHHHHHHCC
Confidence 58999999999999999999999 999999999998876443 23457889998888999999999999999999
Q ss_pred CceeEEEecCCcceEEEEeC
Q 040309 81 FSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 81 f~~~~v~~~~~~~~vie~~p 100 (100)
|+++++++..+..++||++|
T Consensus 328 f~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 328 LRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp EEEEEEEECSSSCEEEEEEE
T ss_pred CceEEEEECCCCcEEEEEEe
Confidence 99999999878899999987
No 5
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.83 E-value=1.3e-20 Score=134.63 Aligned_cols=92 Identities=25% Similarity=0.527 Sum_probs=83.4
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+|||+|+|+++.++|++++++|+ |||+|+|.|.+.++...+ . ...+|+.|+...+|++||.+||+++|++||
T Consensus 276 ~vlh~~~d~~~~~~L~~~~~~L~---pgG~l~i~e~~~~~~~~~----~-~~~~d~~~~~~~~g~~~t~~e~~~ll~~aG 347 (369)
T 3gwz_A 276 HVLHDWDDDDVVRILRRIATAMK---PDSRLLVIDNLIDERPAA----S-TLFVDLLLLVLVGGAERSESEFAALLEKSG 347 (369)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCC---TTCEEEEEEEBCCSSCCH----H-HHHHHHHHHHHHSCCCBCHHHHHHHHHTTT
T ss_pred hhhccCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCC----c-hhHhhHHHHhhcCCccCCHHHHHHHHHHCC
Confidence 58999999999999999999999 999999999998876542 2 457899999888999999999999999999
Q ss_pred CceeEEEe-cCCcceEEEEeC
Q 040309 81 FSHYKITP-ILGVRSLIEAYP 100 (100)
Q Consensus 81 f~~~~v~~-~~~~~~vie~~p 100 (100)
|+++++++ ..+..++||++|
T Consensus 348 f~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 348 LRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp EEEEEEEECSSSSEEEEEEEE
T ss_pred CeEEEEEECCCCCcEEEEEEe
Confidence 99999999 678899999986
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.83 E-value=3e-20 Score=132.01 Aligned_cols=97 Identities=56% Similarity=0.973 Sum_probs=84.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCC---CcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDE---GGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL 77 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~p---gg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~ 77 (100)
++||+|+|+++.++|++++++|+ | ||+|+|.|.+.++....+........+|+.|+...+|++||.+||+++|+
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~---p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~ 335 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAIS---HKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIY 335 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTG---GGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHH
Confidence 58999999999999999999999 9 99999999998876543111124567888888877899999999999999
Q ss_pred HcCCceeEEEecCCcceEEEEeC
Q 040309 78 AAGFSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 78 ~aGf~~~~v~~~~~~~~vie~~p 100 (100)
+|||+++++.+..+..++||++|
T Consensus 336 ~aGf~~~~~~~~~~~~~vie~~~ 358 (358)
T 1zg3_A 336 DAGFSSYKITPISGFKSLIEVYP 358 (358)
T ss_dssp HTTCCEEEEEEETTTEEEEEEEC
T ss_pred HcCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999888889999997
No 7
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.81 E-value=7.6e-20 Score=128.62 Aligned_cols=89 Identities=31% Similarity=0.584 Sum_probs=79.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
++||+|+|+++.++|++++++|+ |||+|+|.|.+.++. .+ ...+|+.|+...+|++||.+||+++|++||
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~-~~------~~~~d~~~~~~~~~~~~t~~e~~~ll~~aG 312 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAG---SGGVVLVIEAVAGDE-HA------GTGMDLRMLTYFGGKERSLAELGELAAQAG 312 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHT---TTCEEEEEECCCC----C------CHHHHHHHHHHHSCCCCCHHHHHHHHHHTT
T ss_pred hhhccCCHHHHHHHHHHHHHhcC---CCCEEEEEeecCCCC-Cc------cHHHHHHHHhhCCCCCCCHHHHHHHHHHCC
Confidence 58999999999999999999999 999999999998766 22 236788888888999999999999999999
Q ss_pred CceeEEEecCCcceEEEEeC
Q 040309 81 FSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 81 f~~~~v~~~~~~~~vie~~p 100 (100)
|+++++++.++ .++||+++
T Consensus 313 f~~~~~~~~~~-~~vie~r~ 331 (332)
T 3i53_A 313 LAVRAAHPISY-VSIVEMTA 331 (332)
T ss_dssp EEEEEEEECSS-SEEEEEEE
T ss_pred CEEEEEEECCC-cEEEEEee
Confidence 99999999988 99999974
No 8
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.81 E-value=1.4e-19 Score=127.19 Aligned_cols=93 Identities=22% Similarity=0.425 Sum_probs=83.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+|+|+++.++|++++++|+ |||+++|.|.+.++...+ .....+|+.|+...+|++||.+||+++|++||
T Consensus 241 ~vl~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~----~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aG 313 (334)
T 2ip2_A 241 RIIGDLDEAASLRLLGNCREAMA---GDGRVVVIERTISASEPS----PMSVLWDVHLFMACAGRHRTTEEVVDLLGRGG 313 (334)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHSC---TTCEEEEEECCBCSSSCC----HHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTT
T ss_pred hhccCCCHHHHHHHHHHHHHhcC---CCCEEEEEEeccCCCCCc----chhHHhhhHhHhhCCCcCCCHHHHHHHHHHCC
Confidence 58999999999999999999999 999999999998765443 24567788888877899999999999999999
Q ss_pred CceeEEEecCCcceEEEEeC
Q 040309 81 FSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 81 f~~~~v~~~~~~~~vie~~p 100 (100)
|+++++.+.++..++||++|
T Consensus 314 f~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 314 FAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp EEEEEEEEETTTEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEEEe
Confidence 99999999888899999985
No 9
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.80 E-value=2.3e-19 Score=127.22 Aligned_cols=96 Identities=50% Similarity=0.964 Sum_probs=82.4
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCC---CcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDE---GGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL 77 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~p---gg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~ 77 (100)
++||+|+|+++.++|++++++|+ | ||+|+|.|.+.++....+........+|+.|+. .+|++||.+||+++|+
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~---p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~g~~~t~~e~~~ll~ 329 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVT---NDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-LNGKERNEEEWKKLFI 329 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHS---GGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-GTCCCEEHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHhCC---CCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-ccCCCCCHHHHHHHHH
Confidence 58999999999999999999999 9 999999999987655431111234567888887 5699999999999999
Q ss_pred HcCCceeEEEecCCcceEEEEeC
Q 040309 78 AAGFSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 78 ~aGf~~~~v~~~~~~~~vie~~p 100 (100)
+|||+.+++.+..+..++||++|
T Consensus 330 ~aGf~~~~~~~~~~~~~vie~~~ 352 (352)
T 1fp2_A 330 EAGFQHYKISPLTGFLSLIEIYP 352 (352)
T ss_dssp HTTCCEEEEEEEETTEEEEEEEC
T ss_pred HCCCCeeEEEecCCCcEEEEEeC
Confidence 99999999999888889999997
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.78 E-value=5.1e-19 Score=126.35 Aligned_cols=97 Identities=28% Similarity=0.579 Sum_probs=81.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
++||+|+|+++.++|++++++|+ |||+++|.|.+.++....+........+|+.|+...+|++||.+||+++|++||
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aG 351 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALS---PNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSG 351 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTT
T ss_pred cccccCCHHHHHHHHHHHHHhcC---CCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCC
Confidence 58999999999999999999999 999999999998876543211113457788888766799999999999999999
Q ss_pred CceeEEEe-cCCcceEEEEeC
Q 040309 81 FSHYKITP-ILGVRSLIEAYP 100 (100)
Q Consensus 81 f~~~~v~~-~~~~~~vie~~p 100 (100)
|+++++.+ ..+..++||++|
T Consensus 352 f~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 352 FSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp CSEEEEEEEETTTEEEEEEEC
T ss_pred CceEEEEEcCCCCeEEEEEeC
Confidence 99999988 445259999997
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.75 E-value=2.7e-18 Score=122.46 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=78.0
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch-hhhhhhhhhhhcccccCceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE-SMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~-~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~a 79 (100)
++||+|+|+++.++|++++++|+ |||+|+|.|.+.++...... +.......++.|+...++++||.+||+++|++|
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~A 332 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIG---KDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENA 332 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCC---TTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTT
T ss_pred chhhhCCHHHHHHHHHHHHHhcC---CCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHc
Confidence 58999999999999999999999 99999999999876543211 001112345556666679999999999999999
Q ss_pred CCceeEEEecC-CcceEEEEeC
Q 040309 80 GFSHYKITPIL-GVRSLIEAYP 100 (100)
Q Consensus 80 Gf~~~~v~~~~-~~~~vie~~p 100 (100)
||+++++.+.. ...++||++|
T Consensus 333 Gf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 333 GLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp TEEESCCCCCBTTTBEEEEEEE
T ss_pred CCeEEEEEeCCCCCceEEEEee
Confidence 99999998765 4599999875
No 12
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.70 E-value=3.8e-17 Score=115.39 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=77.7
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhccccc-CceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLF-RGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~-~g~~rt~~e~~~ll~~a 79 (100)
++||+|+|+++.++|++++++|+ |||+|+|.|.+.++....+ .....+|+.|+..+ +|++||.+||+++|++|
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 329 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVK---PGGALLILTMTMNDDRVTP---ALSADFSLHMMVNTNHGELHPTPWIAGVVRDA 329 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEE---EEEEEEEEEECCCTTSSSS---HHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHHHHHcC---CCCEEEEEEeccCCCCCCC---chHHHhhHHHHhhCCCCCcCCHHHHHHHHHHC
Confidence 58999999999999999999999 9999999999998765442 24567898888755 69999999999999999
Q ss_pred CCceeEEEecCCcceEEEEeC
Q 040309 80 GFSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 80 Gf~~~~v~~~~~~~~vie~~p 100 (100)
||++++.. .+..+++.+++
T Consensus 330 Gf~~~~~~--~g~~~l~~a~k 348 (352)
T 3mcz_A 330 GLAVGERS--IGRYTLLIGQR 348 (352)
T ss_dssp TCEEEEEE--ETTEEEEEEEC
T ss_pred CCceeeec--cCceEEEEEec
Confidence 99999843 35578887753
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.70 E-value=1.7e-17 Score=117.53 Aligned_cols=93 Identities=27% Similarity=0.528 Sum_probs=80.4
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeee-cCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA-IENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v-~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~a 79 (100)
+++|+|+|+++.++|++++++|+ |||+++|.|.+ .++.... .....+|+.|+...+|++||.+||+++|++|
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~a 329 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALE---PGGRILIHERDDLHENSFN----EQFTELDLRMLVFLGGALRTREKWDGLAASA 329 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEE---EEEEEEEEECCBCGGGCCS----HHHHHHHHHHHHHHSCCCCBHHHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHHHHHHhcC---CCcEEEEEEEeccCCCCCc----chhhhccHHHhhhcCCcCCCHHHHHHHHHHC
Confidence 58999999999999999999999 99999999998 7654332 2345678888877789999999999999999
Q ss_pred CCceeEEEecCCc-----ceEEEEeC
Q 040309 80 GFSHYKITPILGV-----RSLIEAYP 100 (100)
Q Consensus 80 Gf~~~~v~~~~~~-----~~vie~~p 100 (100)
||+++++.+.++. .++||++|
T Consensus 330 Gf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (360)
T 1tw3_A 330 GLVVEEVRQLPSPTIPYDLSLLVLAP 355 (360)
T ss_dssp TEEEEEEEEEECSSSSCEEEEEEEEE
T ss_pred CCeEEEEEeCCCCcccCccEEEEEEe
Confidence 9999999888665 79999975
No 14
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.68 E-value=4.3e-17 Score=115.79 Aligned_cols=93 Identities=23% Similarity=0.409 Sum_probs=76.9
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEee--ecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM--AIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLA 78 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~--v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~ 78 (100)
+++|+|+|+++.++|++++++|+ |||+++|.|. +.++.... .....+|+.|+...+|++||.++|+++|++
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 328 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRALE---PGGRLLVLDRADVEGDGADR----FFSTLLDLRMLTFMGGRVRTRDEVVDLAGS 328 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEECCH-------H----HHHHHHHHHHHHHHSCCCCCHHHHHHHHHT
T ss_pred ccccCCCHHHHHHHHHHHHHhcC---CCcEEEEEechhhcCCCCCc----chhhhcchHHHHhCCCcCCCHHHHHHHHHH
Confidence 58999999999999999999999 9999999999 87654322 234567888888788999999999999999
Q ss_pred cCCceeEEEecCCcc-----eEEEEeC
Q 040309 79 AGFSHYKITPILGVR-----SLIEAYP 100 (100)
Q Consensus 79 aGf~~~~v~~~~~~~-----~vie~~p 100 (100)
|||+++++.+.++.. ++||+++
T Consensus 329 aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 329 AGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp TTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred CCCceEEEEECCCCcccCCcEEEEEEE
Confidence 999999999888777 9999864
No 15
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.68 E-value=1.5e-16 Score=111.32 Aligned_cols=93 Identities=23% Similarity=0.429 Sum_probs=80.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhccccc-CceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLF-RGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~-~g~~rt~~e~~~ll~~a 79 (100)
+++|+|+|+++.++|++++++|+ |||+++|.|...++....+ .....+|+.|+... ++++||.+||+++|++|
T Consensus 240 ~~l~~~~~~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~a 313 (335)
T 2r3s_A 240 NFLHHFDVATCEQLLRKIKTALA---VEGKVIVFDFIPNSDRITP---PDAAAFSLVMLATTPNGDAYTFAEYESMFSNA 313 (335)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEECCCCTTSSCS---HHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHT
T ss_pred chhccCCHHHHHHHHHHHHHhCC---CCcEEEEEeecCCCCcCCc---hHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHC
Confidence 58999999999999999999999 9999999999887654432 24557788888776 79999999999999999
Q ss_pred CCceeEEEecCCcceEEEEe
Q 040309 80 GFSHYKITPILGVRSLIEAY 99 (100)
Q Consensus 80 Gf~~~~v~~~~~~~~vie~~ 99 (100)
||+.+++.+..+..++|+++
T Consensus 314 Gf~~~~~~~~~~~~~~i~~~ 333 (335)
T 2r3s_A 314 GFSHSQLHSLPTTQQQVIVA 333 (335)
T ss_dssp TCSEEEEECCTTSSSEEEEE
T ss_pred CCCeeeEEECCCCceeEEEe
Confidence 99999999988878888773
No 16
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.63 E-value=1.5e-15 Score=107.77 Aligned_cols=90 Identities=19% Similarity=0.271 Sum_probs=74.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhccccc-Ccee----cCHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLF-RGKE----RSVDDWKKL 75 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~-~g~~----rt~~e~~~l 75 (100)
+++|+|+|+++.++|++++++|+ |||+++|.|.+.++...+ . ....+ .|+... +|++ ||.+||+++
T Consensus 264 ~vlh~~~d~~~~~~l~~~~~~L~---pgG~l~i~e~~~~~~~~~-~---~~~~~--~~~~~~~~g~~~~~~~t~~e~~~l 334 (359)
T 1x19_A 264 RILYSANEQLSTIMCKKAFDAMR---SGGRLLILDMVIDDPENP-N---FDYLS--HYILGAGMPFSVLGFKEQARYKEI 334 (359)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCC---TTCEEEEEEECCCCTTSC-C---HHHHH--HHGGGGGSSCCCCCCCCGGGHHHH
T ss_pred chhccCCHHHHHHHHHHHHHhcC---CCCEEEEEecccCCCCCc-h---HHHHH--HHHHhcCCCCcccCCCCHHHHHHH
Confidence 58999999999999999999999 999999999998765222 1 22233 444433 4888 999999999
Q ss_pred HHHcCCceeEEEecCCcceEEEEeC
Q 040309 76 FLAAGFSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 76 l~~aGf~~~~v~~~~~~~~vie~~p 100 (100)
|++|||+++++.+.. ..++||+++
T Consensus 335 l~~aGf~~v~~~~~~-~~~vi~a~k 358 (359)
T 1x19_A 335 LESLGYKDVTMVRKY-DHLLVQAVK 358 (359)
T ss_dssp HHHHTCEEEEEEEET-TEEEEEEEC
T ss_pred HHHCCCceEEEEecC-CceEEEEeC
Confidence 999999999999887 789999875
No 17
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.95 E-value=5.6e-09 Score=69.25 Aligned_cols=94 Identities=15% Similarity=0.113 Sum_probs=64.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhh-----------hhh-cc-cccCceec
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF-----------DIL-MV-SLFRGKER 67 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~-----------dl~-ml-~~~~g~~r 67 (100)
+++|++++.+..++|+++++.|+ |||++++.+...++....... ...... ++. .+ .....+.+
T Consensus 117 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (234)
T 3dtn_A 117 LSIHHLEDEDKKELYKRSYSILK---ESGIFINADLVHGETAFIENL-NKTIWRQYVENSGLTEEEIAAGYERSKLDKDI 192 (234)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEECBCSSHHHHHH-HHHHHHHHHHTSSCCHHHHHTTC----CCCCC
T ss_pred CccccCCHHHHHHHHHHHHHhcC---CCcEEEEEEecCCCChhhhhH-HHHHHHHHHHhcCCCHHHHHHHHHhccccccc
Confidence 47899999999999999999999 999999999887643211000 000000 000 00 11235668
Q ss_pred CHHHHHHHHHHcCCceeEEEecCCcceEEEE
Q 040309 68 SVDDWKKLFLAAGFSHYKITPILGVRSLIEA 98 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~~~~~~~vie~ 98 (100)
|.++|.++|++|||+.++++.....++++-.
T Consensus 193 ~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~ 223 (234)
T 3dtn_A 193 EMNQQLNWLKEAGFRDVSCIYKYYQFAVMFG 223 (234)
T ss_dssp BHHHHHHHHHHTTCEEEEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHcCCCceeeeeeecceeEEEE
Confidence 9999999999999999999776555655543
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.77 E-value=1.5e-08 Score=69.47 Aligned_cols=92 Identities=21% Similarity=0.226 Sum_probs=61.0
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhh---------cc----cccC-ceec
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDIL---------MV----SLFR-GKER 67 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~---------ml----~~~~-g~~r 67 (100)
+||..++++..++|++++++|+ |||++++.|...+++...... ......++. .. ...+ -..+
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lk---pGG~lii~e~~~~~~~~~~~~-~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLN---PGGALVLSEKFSFEDAKVGEL-LFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEBCCSSHHHHHH-HHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeecCchhHhHHHHHHHHHcC---CCcEEEEEeccCCCCHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 6899999999999999999999 999999999887654321100 000000100 00 0001 2357
Q ss_pred CHHHHHHHHHHcCCceeEEE-ecCCcceEEE
Q 040309 68 SVDDWKKLFLAAGFSHYKIT-PILGVRSLIE 97 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~-~~~~~~~vie 97 (100)
|.+++.++|++|||+.++++ +..++.++|-
T Consensus 224 s~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA 254 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSELWFQCFNFGSLVA 254 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEEEEEETTEEEEEE
T ss_pred CHHHHHHHHHHcCCCeEEEEEEeccEEEEEE
Confidence 89999999999999999885 4444455553
No 19
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.71 E-value=1.5e-08 Score=67.01 Aligned_cols=95 Identities=14% Similarity=0.056 Sum_probs=61.3
Q ss_pred ccccC-ChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhh--------------------hhhhhhhhccc
Q 040309 2 ILHNW-NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESME--------------------TQLCFDILMVS 60 (100)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~--------------------~~~~~dl~ml~ 60 (100)
++|+. ++++..++|+++++.|+ |||++++.+...++......... .....++.++.
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (239)
T 3bxo_A 110 SVGYLKTTEELGAAVASFAEHLE---PGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTV 186 (239)
T ss_dssp GGGGCCSHHHHHHHHHHHHHTEE---EEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred hHhhcCCHHHHHHHHHHHHHhcC---CCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEE
Confidence 56666 44788999999999999 99999998766554321100000 00011222222
Q ss_pred cc-Cc-----------eecCHHHHHHHHHHcCCceeEEEecCCcceEEEEe
Q 040309 61 LF-RG-----------KERSVDDWKKLFLAAGFSHYKITPILGVRSLIEAY 99 (100)
Q Consensus 61 ~~-~g-----------~~rt~~e~~~ll~~aGf~~~~v~~~~~~~~vie~~ 99 (100)
.. ++ +.+|.+||+++|++|||+++.+....+...++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~ 237 (239)
T 3bxo_A 187 ADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGV 237 (239)
T ss_dssp EETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEE
T ss_pred ecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEe
Confidence 22 12 34699999999999999887776555667777775
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.71 E-value=1e-07 Score=62.45 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=59.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhh---hhhcccc--cCceecCHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF---DILMVSL--FRGKERSVDDWKKL 75 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~---dl~ml~~--~~g~~rt~~e~~~l 75 (100)
+++|++++.+..++|+++++.|+ |||++++.+...+...... ...... .+..+.. ......|.++|+++
T Consensus 114 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (220)
T 3hnr_A 114 YAFHHLTDDEKNVAIAKYSQLLN---KGGKIVFADTIFADQDAYD---KTVEAAKQRGFHQLANDLQTEYYTRIPVMQTI 187 (220)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSC---TTCEEEEEEECBSSHHHHH---HHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHH
T ss_pred cchhcCChHHHHHHHHHHHHhcC---CCCEEEEEeccccChHHHH---HHHHHHHhCCCccchhhcchhhcCCHHHHHHH
Confidence 47899999998889999999999 9999999986654321110 000000 0000000 01133489999999
Q ss_pred HHHcCCceeEEEecCCcceEEEEe
Q 040309 76 FLAAGFSHYKITPILGVRSLIEAY 99 (100)
Q Consensus 76 l~~aGf~~~~v~~~~~~~~vie~~ 99 (100)
|+++||+++.+... +...++++.
T Consensus 188 l~~aGf~v~~~~~~-~~~w~~~~~ 210 (220)
T 3hnr_A 188 FENNGFHVTFTRLN-HFVWVMEAT 210 (220)
T ss_dssp HHHTTEEEEEEECS-SSEEEEEEE
T ss_pred HHHCCCEEEEeecc-ceEEEEeeh
Confidence 99999987766544 556666654
No 21
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.63 E-value=1.1e-07 Score=61.95 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=53.3
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCce-------ecCHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGK-------ERSVDDWK 73 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~-------~rt~~e~~ 73 (100)
+++|++++++..++|+++++.|+ |||++++.+...+.......+ .........-....+. ..|.++|.
T Consensus 115 ~~l~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (218)
T 3ou2_A 115 HWLAHVPDDRFEAFWESVRSAVA---PGGVVEFVDVTDHERRLEQQD--DSEPEVAVRRTLQDGRSFRIVKVFRSPAELT 189 (218)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEECCCC--------------CEEEEECTTSCEEEEECCCCCHHHHH
T ss_pred chhhcCCHHHHHHHHHHHHHHcC---CCeEEEEEeCCCCccccchhh--hcccccceeeecCCcchhhHhhcCCCHHHHH
Confidence 47899999989999999999999 999999999765332211000 0000000000111222 34999999
Q ss_pred HHHHHcCCceeEEEec
Q 040309 74 KLFLAAGFSHYKITPI 89 (100)
Q Consensus 74 ~ll~~aGf~~~~v~~~ 89 (100)
++|+++||++......
T Consensus 190 ~~l~~aGf~v~~~~~~ 205 (218)
T 3ou2_A 190 ERLTALGWSCSVDEVH 205 (218)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHCCCEEEeeecc
Confidence 9999999995554443
No 22
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.62 E-value=4.2e-08 Score=67.55 Aligned_cols=74 Identities=16% Similarity=0.253 Sum_probs=54.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
++||+++|++..++|++++++|+ |||+|++.+...+. +.. .....+.........+.||.+|+.++| +|
T Consensus 165 ~vlh~~~d~~~~~~l~~~~~~L~---pGG~l~i~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~s~~ei~~~l--~G 233 (274)
T 2qe6_A 165 GMLHYLSPDVVDRVVGAYRDALA---PGSYLFMTSLVDTG---LPA---QQKLARITRENLGEGWARTPEEIERQF--GD 233 (274)
T ss_dssp TTGGGSCTTTHHHHHHHHHHHSC---TTCEEEEEEEBCSS---CHH---HHHHHHHHHHHHSCCCCBCHHHHHHTT--TT
T ss_pred chhhhCCcHHHHHHHHHHHHhCC---CCcEEEEEEecCcc---hHH---HHHHHHHHHhcCCCCccCCHHHHHHHh--CC
Confidence 47999999999999999999999 99999999976532 211 122223222222346789999999999 69
Q ss_pred CceeE
Q 040309 81 FSHYK 85 (100)
Q Consensus 81 f~~~~ 85 (100)
|++++
T Consensus 234 ~~l~~ 238 (274)
T 2qe6_A 234 FELVE 238 (274)
T ss_dssp CEECT
T ss_pred CeEcc
Confidence 98775
No 23
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.61 E-value=1.4e-07 Score=62.95 Aligned_cols=73 Identities=18% Similarity=0.287 Sum_probs=58.1
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|++++++..++|+++++.|+ |||++++.+...+. .. .++. ..+...++.++|.++|+++|
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~---~~-------~~~~----~~~~~~~~~~~~~~~l~~aG 216 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLR---PNGIIVIKDNMAQE---GV-------ILDD----VDSSVCRDLDVVRRIICSAG 216 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEEBSS---SE-------EEET----TTTEEEEBHHHHHHHHHHTT
T ss_pred chhhhCCHHHHHHHHHHHHHhcC---CCeEEEEEEccCCC---cc-------eecc----cCCcccCCHHHHHHHHHHcC
Confidence 36899999988999999999999 99999999987654 10 1111 12345679999999999999
Q ss_pred CceeEEEecC
Q 040309 81 FSHYKITPIL 90 (100)
Q Consensus 81 f~~~~v~~~~ 90 (100)
|+++++....
T Consensus 217 f~~~~~~~~~ 226 (241)
T 2ex4_A 217 LSLLAEERQE 226 (241)
T ss_dssp CCEEEEEECC
T ss_pred CeEEEeeecC
Confidence 9999987654
No 24
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.59 E-value=1.6e-07 Score=62.68 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=56.9
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|++++++..++|+++++.|+ |||++++.+........ ..+ .......+|.++|.++|+++|
T Consensus 166 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~---------~~~----~~~~~~~~~~~~~~~~l~~aG 229 (254)
T 1xtp_A 166 WTAIYLTDADFVKFFKHCQQALT---PNGYIFFKENCSTGDRF---------LVD----KEDSSLTRSDIHYKRLFNESG 229 (254)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEBC--CCE---------EEE----TTTTEEEBCHHHHHHHHHHHT
T ss_pred chhhhCCHHHHHHHHHHHHHhcC---CCeEEEEEecCCCcccc---------eec----ccCCcccCCHHHHHHHHHHCC
Confidence 47899999999999999999999 99999999975432211 111 112345689999999999999
Q ss_pred CceeEEEecC
Q 040309 81 FSHYKITPIL 90 (100)
Q Consensus 81 f~~~~v~~~~ 90 (100)
|+++++....
T Consensus 230 f~~~~~~~~~ 239 (254)
T 1xtp_A 230 VRVVKEAFQE 239 (254)
T ss_dssp CCEEEEEECT
T ss_pred CEEEEeeecC
Confidence 9999987654
No 25
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.56 E-value=3.1e-08 Score=65.05 Aligned_cols=94 Identities=10% Similarity=0.027 Sum_probs=59.7
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhc---ccccC---------------
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILM---VSLFR--------------- 63 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~m---l~~~~--------------- 63 (100)
++|.+..++..++|+++++.|+ |||++++.+...+...... ........+..+ +....
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~L~---~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (227)
T 1ve3_A 112 SIVHFEPLELNQVFKEVRRVLK---PSGKFIMYFTDLRELLPRL-KESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSF 187 (227)
T ss_dssp CGGGCCHHHHHHHHHHHHHHEE---EEEEEEEEEECHHHHGGGC-CC---------CCEEEEETTTTEEEEEC-----CC
T ss_pred chHhCCHHHHHHHHHHHHHHcC---CCcEEEEEecChHHHHHHH-HhhhhcccceeecccccCccccEEEEEeccchhhh
Confidence 4667777888999999999999 9999999986532110000 000000000000 00000
Q ss_pred ---ceecCHHHHHHHHHHcCCceeEEEecCCcceEEEEeC
Q 040309 64 ---GKERSVDDWKKLFLAAGFSHYKITPILGVRSLIEAYP 100 (100)
Q Consensus 64 ---g~~rt~~e~~~ll~~aGf~~~~v~~~~~~~~vie~~p 100 (100)
...++ .+|.++|+++||+.+++.+.+....+|+.+|
T Consensus 188 ~~~~~~w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~~~~ 226 (227)
T 1ve3_A 188 RVRFNVWG-KTGVELLAKLYFTKEAEEKVGNYSYLTVYNP 226 (227)
T ss_dssp EEEEECCC-HHHHHHHHTTTEEEEEEEEETTTEEEEEEEE
T ss_pred eeehhhhc-hHHHHHHHHHhhhHHHHHHhCCceeEEeeCC
Confidence 11122 4899999999999999999877778999987
No 26
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.55 E-value=5.5e-07 Score=58.88 Aligned_cols=77 Identities=16% Similarity=0.081 Sum_probs=57.9
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+++|. .++|+++++.|+ |||++++.+..........+ ....++.++|.++++++|
T Consensus 114 ~~l~~~~~~--~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 114 FTFHELSEP--LKFLEELKRVAK---PFAYLAIIDWKKEERDKGPP----------------PEEVYSEWEVGLILEDAG 172 (219)
T ss_dssp SCGGGCSSH--HHHHHHHHHHEE---EEEEEEEEEECSSCCSSSCC----------------GGGSCCHHHHHHHHHHTT
T ss_pred hhhhhcCCH--HHHHHHHHHHhC---CCeEEEEEEecccccccCCc----------------hhcccCHHHHHHHHHHCC
Confidence 367888764 789999999999 99999999977654432211 112358999999999999
Q ss_pred CceeEEEecCCcceEEEE
Q 040309 81 FSHYKITPILGVRSLIEA 98 (100)
Q Consensus 81 f~~~~v~~~~~~~~vie~ 98 (100)
|+++++.........+.+
T Consensus 173 f~~~~~~~~~~~~~~~~~ 190 (219)
T 3dh0_A 173 IRVGRVVEVGKYCFGVYA 190 (219)
T ss_dssp CEEEEEEEETTTEEEEEE
T ss_pred CEEEEEEeeCCceEEEEE
Confidence 999999887655444444
No 27
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.53 E-value=2.9e-07 Score=62.75 Aligned_cols=86 Identities=10% Similarity=0.176 Sum_probs=59.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCC----Cchhh-hhhhhhhh-hcccccCceecCHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQ----DKESM-ETQLCFDI-LMVSLFRGKERSVDDWKK 74 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~----~~~~~-~~~~~~dl-~ml~~~~g~~rt~~e~~~ 74 (100)
+++|++++++..++|+++++.|+ |||++++.+...+.... ..+.. ......+. ......++...|.++|.+
T Consensus 137 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 213 (287)
T 1kpg_A 137 GAFEHFGHERYDAFFSLAHRLLP---ADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQE 213 (287)
T ss_dssp SCGGGTCTTTHHHHHHHHHHHSC---TTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHH
T ss_pred CchhhcChHHHHHHHHHHHHhcC---CCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHH
Confidence 36889988888999999999999 99999999987654211 00000 00011111 111234577789999999
Q ss_pred HHHHcCCceeEEEec
Q 040309 75 LFLAAGFSHYKITPI 89 (100)
Q Consensus 75 ll~~aGf~~~~v~~~ 89 (100)
+++++||+++++...
T Consensus 214 ~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 214 CASANGFTVTRVQSL 228 (287)
T ss_dssp HHHTTTCEEEEEEEC
T ss_pred HHHhCCcEEEEEEeC
Confidence 999999999998764
No 28
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.53 E-value=1.7e-07 Score=63.12 Aligned_cols=95 Identities=12% Similarity=0.041 Sum_probs=60.1
Q ss_pred ccccCCh-HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhh--------------------hhhhhhhhhccc
Q 040309 2 ILHNWND-EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESM--------------------ETQLCFDILMVS 60 (100)
Q Consensus 2 vlHdw~d-~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~--------------------~~~~~~dl~ml~ 60 (100)
++|.+++ ++..++|+++++.|+ |||+++|.+...++.-...... .....+++.++.
T Consensus 120 ~l~~~~~~~~~~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (263)
T 3pfg_A 120 SIGHLAGQAELDAALERFAAHVL---PDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLV 196 (263)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTEE---EEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcC---CCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEE
Confidence 6777754 678899999999999 9999999765544422110000 000011222222
Q ss_pred ccC------------ceecCHHHHHHHHHHcCCceeEEEecCCcceEEEEe
Q 040309 61 LFR------------GKERSVDDWKKLFLAAGFSHYKITPILGVRSLIEAY 99 (100)
Q Consensus 61 ~~~------------g~~rt~~e~~~ll~~aGf~~~~v~~~~~~~~vie~~ 99 (100)
..+ .+.+|.+||+++|++|||+++++....+...++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~ 247 (263)
T 3pfg_A 197 AGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGL 247 (263)
T ss_dssp EETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEE
T ss_pred ecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEe
Confidence 111 334689999999999999999987665555555543
No 29
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.49 E-value=1.9e-07 Score=64.19 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=60.8
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc-----hhh-hhhh-------------hhhhhcc---
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK-----ESM-ETQL-------------CFDILMV--- 59 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~-----~~~-~~~~-------------~~dl~ml--- 59 (100)
++|.+++++..++|+++++.|+ |||+|++.....+...... .+. .... ...+.+.
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLE---PGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPAD 236 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEE---EEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESC
T ss_pred ccccCCHHHHHHHHHHHHHHcC---CCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEecc
Confidence 4677888889999999999999 9999998876543210000 000 0000 0001000
Q ss_pred --------cccCceecCHHHHHHHHHHcCCceeEEEecCC------cceEEEEeC
Q 040309 60 --------SLFRGKERSVDDWKKLFLAAGFSHYKITPILG------VRSLIEAYP 100 (100)
Q Consensus 60 --------~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~~------~~~vie~~p 100 (100)
....-+.+|.+||+++|++|||+++++.+... ...++|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~ 291 (299)
T 3g2m_A 237 ETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVM 291 (299)
T ss_dssp C--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEEC
T ss_pred CCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhh
Confidence 00113467999999999999999999987642 246787753
No 30
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.48 E-value=5e-07 Score=60.41 Aligned_cols=79 Identities=15% Similarity=0.238 Sum_probs=58.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|++++++..++|+++++.|+ |||++++.+...+......+ ...... ...+...+|.++|.++|+++|
T Consensus 128 ~~l~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 128 DAILALSLENKNKLFQKCYKWLK---PTGTLLITDYCATEKENWDD--EFKEYV-----KQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEEESCGGGCCH--HHHHHH-----HHHTCCCCCHHHHHHHHHHTT
T ss_pred HHHHhcChHHHHHHHHHHHHHcC---CCCEEEEEEeccCCcccchH--HHHHHH-----hcCCCCCCCHHHHHHHHHHcC
Confidence 47899998999999999999999 99999999987665221111 011111 112345679999999999999
Q ss_pred CceeEEEec
Q 040309 81 FSHYKITPI 89 (100)
Q Consensus 81 f~~~~v~~~ 89 (100)
|+++++...
T Consensus 198 f~~~~~~~~ 206 (266)
T 3ujc_A 198 FKNVVSKDL 206 (266)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEeC
Confidence 999988765
No 31
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.47 E-value=2.8e-07 Score=59.70 Aligned_cols=80 Identities=11% Similarity=0.080 Sum_probs=59.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|++++++..++|+++++.|+ |||++++.+...+.... . .. .......+|.++|.++|+++|
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~------~---~~----~~~~~~~~~~~~~~~~l~~~G 173 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVE---DGGGLLMSFFSGPSLEP------M---YH----PVATAYRWPLPELAQALETAG 173 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEE---EEEEEEEEEECCSSCEE------E---CC----SSSCEEECCHHHHHHHHHHTT
T ss_pred hhHhcCCHHHHHHHHHHHHHHcC---CCcEEEEEEccCCchhh------h---hc----hhhhhccCCHHHHHHHHHHCC
Confidence 36889998889999999999999 99999998865433110 0 00 112356789999999999999
Q ss_pred CceeEEEecCC-cceEE
Q 040309 81 FSHYKITPILG-VRSLI 96 (100)
Q Consensus 81 f~~~~v~~~~~-~~~vi 96 (100)
|+++++..... +.+.+
T Consensus 174 f~~~~~~~~~~~p~~~l 190 (203)
T 3h2b_A 174 FQVTSSHWDPRFPHAYL 190 (203)
T ss_dssp EEEEEEEECTTSSEEEE
T ss_pred CcEEEEEecCCCcchhh
Confidence 99999876643 34443
No 32
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.47 E-value=2.6e-07 Score=61.27 Aligned_cols=69 Identities=13% Similarity=0.183 Sum_probs=55.0
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|.+++++..++|+++++.|+ |||++++.+.........++ ..++.++|.++|+++|
T Consensus 140 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~------------------~~~~~~~~~~~l~~~G 198 (235)
T 3lcc_A 140 VFFCAIEPEMRPAWAKSMYELLK---PDGELITLMYPITDHVGGPP------------------YKVDVSTFEEVLVPIG 198 (235)
T ss_dssp SSTTTSCGGGHHHHHHHHHHHEE---EEEEEEEEECCCSCCCSCSS------------------CCCCHHHHHHHHGGGT
T ss_pred hhhhcCCHHHHHHHHHHHHHHCC---CCcEEEEEEecccccCCCCC------------------ccCCHHHHHHHHHHcC
Confidence 36889998889999999999999 99999998876543322211 1268999999999999
Q ss_pred CceeEEEecC
Q 040309 81 FSHYKITPIL 90 (100)
Q Consensus 81 f~~~~v~~~~ 90 (100)
|+++++....
T Consensus 199 f~~~~~~~~~ 208 (235)
T 3lcc_A 199 FKAVSVEENP 208 (235)
T ss_dssp EEEEEEEECT
T ss_pred CeEEEEEecC
Confidence 9999987653
No 33
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.46 E-value=3.6e-07 Score=61.72 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=56.9
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+++|. .++|+++++.|+ |||++++.+......... . ....++-.......+..+|.++|.++++++|
T Consensus 137 ~~l~~~~~~--~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 207 (273)
T 3bus_A 137 ESLHHMPDR--GRALREMARVLR---PGGTVAIADFVLLAPVEG-A---KKEAVDAFRAGGGVLSLGGIDEYESDVRQAE 207 (273)
T ss_dssp SCTTTSSCH--HHHHHHHHTTEE---EEEEEEEEEEEESSCCCH-H---HHHHHHHHHHHHTCCCCCCHHHHHHHHHHTT
T ss_pred chhhhCCCH--HHHHHHHHHHcC---CCeEEEEEEeeccCCCCh-h---HHHHHHHHHhhcCccCCCCHHHHHHHHHHcC
Confidence 367888775 789999999999 999999999876543221 1 1111111111123567889999999999999
Q ss_pred CceeEEEec
Q 040309 81 FSHYKITPI 89 (100)
Q Consensus 81 f~~~~v~~~ 89 (100)
|+++++...
T Consensus 208 f~~~~~~~~ 216 (273)
T 3bus_A 208 LVVTSTVDI 216 (273)
T ss_dssp CEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999988765
No 34
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.43 E-value=4e-07 Score=59.77 Aligned_cols=82 Identities=11% Similarity=0.153 Sum_probs=54.5
Q ss_pred CccccCCh-HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhccc---------------ccCc
Q 040309 1 GILHNWND-EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVS---------------LFRG 64 (100)
Q Consensus 1 ~vlHdw~d-~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~---------------~~~g 64 (100)
+++|.++| ++..++|+++++.|+ |||++++.+...+.... .+ ......++.... ....
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLK---PGAYLYLVEFGQNWHLK--LY-RKRYLHDFPITKEEGSFLARDPETGETEFIA 182 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEE---EEEEEEEEEEBCCTTSH--HH-HHHHHHHHHHHCSTTEEEEECTTTCCEEEEE
T ss_pred chhhcCCCHHHHHHHHHHHHHHcC---CCeEEEEEECCcchhHH--HH-HHHhhhhccchhhhcceEecccccCCcceee
Confidence 36788865 457799999999999 99999999976532211 11 111111111000 0113
Q ss_pred eecCHHHHHHHHHHcCCceeEEEe
Q 040309 65 KERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
+.+|.++|+++|++|||+++++..
T Consensus 183 ~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 183 HHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp ECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred EeCCHHHHHHHHHHcCCEEEEEEe
Confidence 578999999999999999998853
No 35
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.42 E-value=2.6e-07 Score=62.17 Aligned_cols=78 Identities=13% Similarity=0.333 Sum_probs=55.7
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhh-hhccc-ccCceecCHHHHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFD-ILMVS-LFRGKERSVDDWKKLFLA 78 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~d-l~ml~-~~~g~~rt~~e~~~ll~~ 78 (100)
+++|+|+|. .++|++++++|+ |||++++.+...+.... ....+. +..+. ....+.++.++|.++|++
T Consensus 111 ~~l~~~~d~--~~~l~~~~r~Lk---pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 179 (260)
T 1vl5_A 111 IAAHHFPNP--ASFVSEAYRVLK---KGGQLLLVDNSAPENDA------FDVFYNYVEKERDYSHHRAWKKSDWLKMLEE 179 (260)
T ss_dssp SCGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEEEBCSSHH------HHHHHHHHHHHHCTTCCCCCBHHHHHHHHHH
T ss_pred hhhHhcCCH--HHHHHHHHHHcC---CCCEEEEEEcCCCCCHH------HHHHHHHHHHhcCccccCCCCHHHHHHHHHH
Confidence 368999876 689999999999 99999999987664311 111111 11111 123567899999999999
Q ss_pred cCCceeEEEec
Q 040309 79 AGFSHYKITPI 89 (100)
Q Consensus 79 aGf~~~~v~~~ 89 (100)
+||+++++...
T Consensus 180 aGf~~~~~~~~ 190 (260)
T 1vl5_A 180 AGFELEELHCF 190 (260)
T ss_dssp HTCEEEEEEEE
T ss_pred CCCeEEEEEEe
Confidence 99998887543
No 36
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.40 E-value=1.6e-06 Score=59.83 Aligned_cols=94 Identities=12% Similarity=0.043 Sum_probs=57.5
Q ss_pred ccccCC-hHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc-hhh--hh----hhhhh--hhcccccC-ceecCHH
Q 040309 2 ILHNWN-DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK-ESM--ET----QLCFD--ILMVSLFR-GKERSVD 70 (100)
Q Consensus 2 vlHdw~-d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~-~~~--~~----~~~~d--l~ml~~~~-g~~rt~~ 70 (100)
++|+++ ++.+.++|+++++.|+ |||++++.+...+...... ++. .. ..... +......+ ...+|.+
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALK---PGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEE---EEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcC---CCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 577885 4455689999999999 9999999886654332210 000 00 00000 00011111 2447999
Q ss_pred HHHHHHHHcCCceeEEEecC-CcceEEEE
Q 040309 71 DWKKLFLAAGFSHYKITPIL-GVRSLIEA 98 (100)
Q Consensus 71 e~~~ll~~aGf~~~~v~~~~-~~~~vie~ 98 (100)
+|.++|++|||+++++.... +....+.+
T Consensus 273 ~~~~~l~~aGF~~v~~~~~~~~~~~~v~a 301 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDDRARLFPTVIA 301 (305)
T ss_dssp HHHHHHHHTTCEEEEEECCTTSSSCEEEE
T ss_pred HHHHHHHHCCCEEEEEEcccCceeeEEEE
Confidence 99999999999999988653 33444444
No 37
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.39 E-value=3.1e-07 Score=61.33 Aligned_cols=78 Identities=14% Similarity=0.281 Sum_probs=55.6
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhh-hhccc-ccCceecCHHHHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFD-ILMVS-LFRGKERSVDDWKKLFLA 78 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~d-l~ml~-~~~g~~rt~~e~~~ll~~ 78 (100)
+++|+|+|. .++|++++++|+ |||++++.+...+... . ....+. +..+. ....+.++.++|.++|++
T Consensus 95 ~~l~~~~~~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 163 (239)
T 1xxl_A 95 YAAHHFSDV--RKAVREVARVLK---QDGRFLLVDHYAPEDP---V---LDEFVNHLNRLRDPSHVRESSLSEWQAMFSA 163 (239)
T ss_dssp SCGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEECBCSSH---H---HHHHHHHHHHHHCTTCCCCCBHHHHHHHHHH
T ss_pred CchhhccCH--HHHHHHHHHHcC---CCcEEEEEEcCCCCCh---h---HHHHHHHHHHhccccccCCCCHHHHHHHHHH
Confidence 368999874 789999999999 9999999998765431 1 111111 11111 123567899999999999
Q ss_pred cCCceeEEEec
Q 040309 79 AGFSHYKITPI 89 (100)
Q Consensus 79 aGf~~~~v~~~ 89 (100)
+||+++++...
T Consensus 164 aGf~~~~~~~~ 174 (239)
T 1xxl_A 164 NQLAYQDIQKW 174 (239)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCcEEEEEee
Confidence 99998887643
No 38
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.39 E-value=6.4e-07 Score=58.41 Aligned_cols=72 Identities=17% Similarity=0.118 Sum_probs=53.6
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|++++++..++|+++++.|+ |||++++........... ... ..-..++.++|.++|+++|
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~--------~~~------~~~~~~~~~~~~~~l~~aG 172 (211)
T 3e23_A 110 ACLLHVPRDELADVLKLIWRALK---PGGLFYASYKSGEGEGRD--------KLA------RYYNYPSEEWLRARYAEAG 172 (211)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEECCSSCEEC--------TTS------CEECCCCHHHHHHHHHHHC
T ss_pred CchhhcCHHHHHHHHHHHHHhcC---CCcEEEEEEcCCCccccc--------ccc------hhccCCCHHHHHHHHHhCC
Confidence 47899999999999999999999 999999975433211100 000 0124569999999999999
Q ss_pred -CceeEEEec
Q 040309 81 -FSHYKITPI 89 (100)
Q Consensus 81 -f~~~~v~~~ 89 (100)
|+++++...
T Consensus 173 ~f~~~~~~~~ 182 (211)
T 3e23_A 173 TWASVAVESS 182 (211)
T ss_dssp CCSEEEEEEE
T ss_pred CcEEEEEEec
Confidence 999998653
No 39
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.38 E-value=8.8e-08 Score=62.27 Aligned_cols=90 Identities=17% Similarity=0.133 Sum_probs=56.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhh-hhhh-hhhhcccccCceecCHHHHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESME-TQLC-FDILMVSLFRGKERSVDDWKKLFLA 78 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~-~~~~-~dl~ml~~~~g~~rt~~e~~~ll~~ 78 (100)
+++|+++| ..++|+++++.|+ |||++++.+...+..... .... .... .............+|.++|.++|++
T Consensus 119 ~~l~~~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (219)
T 3dlc_A 119 GSVFFWED--VATAFREIYRILK---SGGKTYIGGGFGNKELRD-SISAEMIRKNPDWKEFNRKNISQENVERFQNVLDE 192 (219)
T ss_dssp SCGGGCSC--HHHHHHHHHHHEE---EEEEEEEEECCSSHHHHH-HHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHH
T ss_pred chHhhccC--HHHHHHHHHHhCC---CCCEEEEEeccCcHHHHH-HHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHH
Confidence 36788866 4789999999999 999999988554321100 0000 0000 0000001122455688999999999
Q ss_pred cCCceeEEEecCCcceEE
Q 040309 79 AGFSHYKITPILGVRSLI 96 (100)
Q Consensus 79 aGf~~~~v~~~~~~~~vi 96 (100)
+||+.+++........++
T Consensus 193 aGf~~v~~~~~~~~~~~~ 210 (219)
T 3dlc_A 193 IGISSYEIILGDEGFWII 210 (219)
T ss_dssp HTCSSEEEEEETTEEEEE
T ss_pred cCCCeEEEEecCCceEEE
Confidence 999999998776554444
No 40
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.36 E-value=2.3e-06 Score=56.88 Aligned_cols=76 Identities=14% Similarity=0.150 Sum_probs=55.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|++++++..++|+++++.|+ |||++++...... . . ....+.. .........+.+++.++++++|
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~---~--~----~~~~~~~-~~~~~~~~~~~~~l~~~l~~aG 175 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMK---YSSYIVIESPNPT---S--L----YSLINFY-IDPTHKKPVHPETLKFILEYLG 175 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBC---TTCCEEEEEECTT---S--H----HHHHHHT-TSTTCCSCCCHHHHHHHHHHHT
T ss_pred CchhhCCcHHHHHHHHHHHHHcC---CCcEEEEEeCCcc---h--h----HHHHHHh-cCccccccCCHHHHHHHHHHCC
Confidence 47899999889999999999999 9999998764321 1 1 1111111 1122356679999999999999
Q ss_pred CceeEEEec
Q 040309 81 FSHYKITPI 89 (100)
Q Consensus 81 f~~~~v~~~ 89 (100)
|+++++...
T Consensus 176 f~~~~~~~~ 184 (240)
T 3dli_A 176 FRDVKIEFF 184 (240)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEEe
Confidence 999988654
No 41
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.35 E-value=7.9e-07 Score=61.53 Aligned_cols=86 Identities=15% Similarity=0.194 Sum_probs=59.4
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCC----chhh-hhhhhhhhh-cccccCceecCHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQD----KESM-ETQLCFDIL-MVSLFRGKERSVDDWKK 74 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~----~~~~-~~~~~~dl~-ml~~~~g~~rt~~e~~~ 74 (100)
+++|++++++..++|+++++.|+ |||++++.+...+..... .+.. ......+.. .....++..+|.++|.+
T Consensus 163 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 239 (318)
T 2fk8_A 163 EAFEHFGHENYDDFFKRCFNIMP---ADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVE 239 (318)
T ss_dssp SCGGGTCGGGHHHHHHHHHHHSC---TTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHH
T ss_pred ChHHhcCHHHHHHHHHHHHHhcC---CCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHH
Confidence 36888988889999999999999 999999999876542110 0000 000011111 11233577789999999
Q ss_pred HHHHcCCceeEEEec
Q 040309 75 LFLAAGFSHYKITPI 89 (100)
Q Consensus 75 ll~~aGf~~~~v~~~ 89 (100)
+++++||+++++...
T Consensus 240 ~l~~aGf~~~~~~~~ 254 (318)
T 2fk8_A 240 HGEKAGFTVPEPLSL 254 (318)
T ss_dssp HHHHTTCBCCCCEEC
T ss_pred HHHhCCCEEEEEEec
Confidence 999999999987654
No 42
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.35 E-value=1e-06 Score=60.30 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=55.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+++| ..++|++++++|+ |||++++.+...+...... .....++.. ......|.++|.++|+++|
T Consensus 158 ~~l~~~~~--~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~l~~aG 225 (297)
T 2o57_A 158 DAFLHSPD--KLKVFQECARVLK---PRGVMAITDPMKEDGIDKS---SIQPILDRI----KLHDMGSLGLYRSLAKECG 225 (297)
T ss_dssp SCGGGCSC--HHHHHHHHHHHEE---EEEEEEEEEEEECTTCCGG---GGHHHHHHH----TCSSCCCHHHHHHHHHHTT
T ss_pred chhhhcCC--HHHHHHHHHHHcC---CCeEEEEEEeccCCCCchH---HHHHHHHHh----cCCCCCCHHHHHHHHHHCC
Confidence 36888988 5899999999999 9999999998766543221 111122111 1123569999999999999
Q ss_pred CceeEEEec
Q 040309 81 FSHYKITPI 89 (100)
Q Consensus 81 f~~~~v~~~ 89 (100)
|+++++...
T Consensus 226 f~~~~~~~~ 234 (297)
T 2o57_A 226 LVTLRTFSR 234 (297)
T ss_dssp EEEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999988764
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.31 E-value=1.8e-06 Score=54.34 Aligned_cols=74 Identities=20% Similarity=0.226 Sum_probs=55.3
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+++| ..++|+++++.|+ |||++++.+.........++. ...+|.++|+++|+ |
T Consensus 83 ~~l~~~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~l~--G 139 (170)
T 3i9f_A 83 NSFHDMDD--KQHVISEVKRILK---DDGRVIIIDWRKENTGIGPPL----------------SIRMDEKDYMGWFS--N 139 (170)
T ss_dssp SCSTTCSC--HHHHHHHHHHHEE---EEEEEEEEEECSSCCSSSSCG----------------GGCCCHHHHHHHTT--T
T ss_pred cchhcccC--HHHHHHHHHHhcC---CCCEEEEEEcCccccccCchH----------------hhhcCHHHHHHHHh--C
Confidence 36788876 4789999999999 999999999776543332110 12369999999999 9
Q ss_pred CceeEEEecCCcceEEE
Q 040309 81 FSHYKITPILGVRSLIE 97 (100)
Q Consensus 81 f~~~~v~~~~~~~~vie 97 (100)
|+++++.........+.
T Consensus 140 f~~~~~~~~~~~~~~l~ 156 (170)
T 3i9f_A 140 FVVEKRFNPTPYHFGLV 156 (170)
T ss_dssp EEEEEEECSSTTEEEEE
T ss_pred cEEEEccCCCCceEEEE
Confidence 99999988875544443
No 44
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.28 E-value=1.7e-06 Score=59.51 Aligned_cols=86 Identities=15% Similarity=0.217 Sum_probs=58.9
Q ss_pred ccccCCh-------HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhh-----hhhhhhhh-hcccccCceecC
Q 040309 2 ILHNWND-------EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESM-----ETQLCFDI-LMVSLFRGKERS 68 (100)
Q Consensus 2 vlHdw~d-------~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~-----~~~~~~dl-~ml~~~~g~~rt 68 (100)
++|+++| ++..++|+++++.|+ |||++++.+...++........ ......+. .-....++...+
T Consensus 146 ~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s 222 (302)
T 3hem_A 146 AFEHFADGAGDAGFERYDTFFKKFYNLTP---DDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPR 222 (302)
T ss_dssp CGGGTTCCSSCCCTTHHHHHHHHHHHSSC---TTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCC
T ss_pred hHHhcCccccccchhHHHHHHHHHHHhcC---CCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCC
Confidence 6788844 678899999999999 9999999998766432100000 00000111 112334678899
Q ss_pred HHHHHHHHHHcCCceeEEEecC
Q 040309 69 VDDWKKLFLAAGFSHYKITPIL 90 (100)
Q Consensus 69 ~~e~~~ll~~aGf~~~~v~~~~ 90 (100)
.+++.++++++||+++++...+
T Consensus 223 ~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 223 ISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp HHHHHHHHHHHTCEEEEEEECG
T ss_pred HHHHHHHHHhCCcEEEEEEeCc
Confidence 9999999999999999987654
No 45
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.24 E-value=2.5e-06 Score=60.91 Aligned_cols=76 Identities=16% Similarity=0.345 Sum_probs=54.7
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|.++|. .++|+++++.|+ |||++++.+...+..... ....+........+..++.++|.++|+++||
T Consensus 175 ~l~~~~d~--~~~l~~~~r~Lk---pgG~l~i~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF 243 (383)
T 4fsd_A 175 VCNLSTNK--LALFKEIHRVLR---DGGELYFSDVYADRRLSE------AAQQDPILYGECLGGALYLEDFRRLVAEAGF 243 (383)
T ss_dssp CGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEEEESSCCCH------HHHHCHHHHHTTCTTCCBHHHHHHHHHHTTC
T ss_pred chhcCCCH--HHHHHHHHHHcC---CCCEEEEEEeccccccCH------hHhhhHHHhhcccccCCCHHHHHHHHHHCCC
Confidence 67888774 799999999999 999999999876532221 1111222222334667899999999999999
Q ss_pred ceeEEEe
Q 040309 82 SHYKITP 88 (100)
Q Consensus 82 ~~~~v~~ 88 (100)
+.+++..
T Consensus 244 ~~v~~~~ 250 (383)
T 4fsd_A 244 RDVRLVS 250 (383)
T ss_dssp CCEEEEE
T ss_pred ceEEEEe
Confidence 9887653
No 46
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.21 E-value=1.9e-06 Score=56.91 Aligned_cols=84 Identities=13% Similarity=0.132 Sum_probs=51.1
Q ss_pred ccccC-ChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCC-----CCc------h----hh----hhhhhhhhhcccc
Q 040309 2 ILHNW-NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQS-----QDK------E----SM----ETQLCFDILMVSL 61 (100)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~-----~~~------~----~~----~~~~~~dl~ml~~ 61 (100)
++|++ ++++..++|+++++.|+ |||++++ +...+... ... . +. ......++.++..
T Consensus 111 ~l~~~~~~~~~~~~l~~~~~~L~---pgG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (246)
T 1y8c_A 111 STNYIIDSDDLKKYFKAVSNHLK---EGGVFIF-DINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVR 186 (246)
T ss_dssp GGGGCCSHHHHHHHHHHHHTTEE---EEEEEEE-EEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcC---CCcEEEE-EecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEe
Confidence 78888 44788999999999999 8999887 32211100 000 0 00 0000011111111
Q ss_pred cC-----------ceecCHHHHHHHHHHcCCceeEEEec
Q 040309 62 FR-----------GKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 62 ~~-----------g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
.+ -+.+|.++|+++|++|||+++++...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 187 DGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp CSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred cCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 11 24569999999999999999998653
No 47
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.20 E-value=4.6e-06 Score=55.13 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=52.7
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+++|. .++|+++++.|+ |||+++|.+.......... ....... .......++.+++.++++++|
T Consensus 124 ~~l~~~~~~--~~~l~~~~~~L~---pgG~l~i~~~~~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~l~~~G 191 (242)
T 3l8d_A 124 NSLEWTEEP--LRALNEIKRVLK---SDGYACIAILGPTAKPREN---SYPRLYG----KDVVCNTMMPWEFEQLVKEQG 191 (242)
T ss_dssp SCTTSSSCH--HHHHHHHHHHEE---EEEEEEEEEECTTCGGGGG---GGGGGGT----CCCSSCCCCHHHHHHHHHHTT
T ss_pred ChHhhccCH--HHHHHHHHHHhC---CCeEEEEEEcCCcchhhhh---hhhhhcc----ccccccCCCHHHHHHHHHHcC
Confidence 467888765 688999999999 9999999985433211110 0111111 112355689999999999999
Q ss_pred CceeEEEec
Q 040309 81 FSHYKITPI 89 (100)
Q Consensus 81 f~~~~v~~~ 89 (100)
|+++++...
T Consensus 192 f~~~~~~~~ 200 (242)
T 3l8d_A 192 FKVVDGIGV 200 (242)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEeecc
Confidence 999987643
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.19 E-value=4.1e-06 Score=54.50 Aligned_cols=78 Identities=14% Similarity=0.182 Sum_probs=50.2
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcc------cccCceecCHHHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMV------SLFRGKERSVDDWKKL 75 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml------~~~~g~~rt~~e~~~l 75 (100)
++| +.| ..++|+++++.|+ |||++++.+......... ++ .......... .......+|.++|.++
T Consensus 125 ~l~-~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (227)
T 3e8s_A 125 ALL-HQD--IIELLSAMRTLLV---PGGALVIQTLHPWSVADG-DY--QDGWREESFAGFAGDWQPMPWYFRTLASWLNA 195 (227)
T ss_dssp CCC-SSC--CHHHHHHHHHTEE---EEEEEEEEECCTTTTCTT-CC--SCEEEEECCTTSSSCCCCEEEEECCHHHHHHH
T ss_pred hhh-hhh--HHHHHHHHHHHhC---CCeEEEEEecCccccCcc-cc--ccccchhhhhccccCcccceEEEecHHHHHHH
Confidence 466 444 4689999999999 999999988654332211 00 0000000000 0112356799999999
Q ss_pred HHHcCCceeEEEe
Q 040309 76 FLAAGFSHYKITP 88 (100)
Q Consensus 76 l~~aGf~~~~v~~ 88 (100)
|++|||+++++..
T Consensus 196 l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 196 LDMAGLRLVSLQE 208 (227)
T ss_dssp HHHTTEEEEEEEC
T ss_pred HHHcCCeEEEEec
Confidence 9999999999865
No 49
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.16 E-value=3.8e-06 Score=58.10 Aligned_cols=76 Identities=8% Similarity=0.046 Sum_probs=54.1
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|.++ ..++|+++++.|+ |||++++.+...++...... .....++-.. ....+|.++|.++|+++||
T Consensus 194 ~l~~~~---~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~--~~~~~~~~~~----~~~~~s~~~~~~~l~~aGf 261 (312)
T 3vc1_A 194 STMYVD---LHDLFSEHSRFLK---VGGRYVTITGCWNPRYGQPS--KWVSQINAHF----ECNIHSRREYLRAMADNRL 261 (312)
T ss_dssp CGGGSC---HHHHHHHHHHHEE---EEEEEEEEEEEECTTTCSCC--HHHHHHHHHH----TCCCCBHHHHHHHHHTTTE
T ss_pred chhhCC---HHHHHHHHHHHcC---CCcEEEEEEccccccccchh--HHHHHHHhhh----cCCCCCHHHHHHHHHHCCC
Confidence 677773 7899999999999 99999999987765432110 1111111111 1247799999999999999
Q ss_pred ceeEEEec
Q 040309 82 SHYKITPI 89 (100)
Q Consensus 82 ~~~~v~~~ 89 (100)
+++++...
T Consensus 262 ~~~~~~~~ 269 (312)
T 3vc1_A 262 VPHTIVDL 269 (312)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99988764
No 50
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.16 E-value=2.7e-06 Score=56.75 Aligned_cols=76 Identities=8% Similarity=-0.029 Sum_probs=54.3
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|+++| ..++|++++++|+ |||++++.+.......... .....+ ........+|.++|.++|+++||
T Consensus 112 ~~~~~~~--~~~~l~~~~r~Lk---pgG~l~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~l~~aGf 179 (256)
T 1nkv_A 112 ATWIAGG--FAGAEELLAQSLK---PGGIMLIGEPYWRQLPATE---EIAQAC----GVSSTSDFLTLPGLVGAFDDLGY 179 (256)
T ss_dssp CGGGTSS--SHHHHHHHTTSEE---EEEEEEEEEEEETTCCSSH---HHHHTT----TCSCGGGSCCHHHHHHHHHTTTB
T ss_pred ChHhcCC--HHHHHHHHHHHcC---CCeEEEEecCcccCCCChH---HHHHHH----hcccccccCCHHHHHHHHHHCCC
Confidence 6788876 4889999999999 9999999998765433321 111111 11122466899999999999999
Q ss_pred ceeEEEec
Q 040309 82 SHYKITPI 89 (100)
Q Consensus 82 ~~~~v~~~ 89 (100)
+.+++...
T Consensus 180 ~~~~~~~~ 187 (256)
T 1nkv_A 180 DVVEMVLA 187 (256)
T ss_dssp CCCEEEEC
T ss_pred eeEEEEeC
Confidence 99887543
No 51
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.15 E-value=3.2e-06 Score=55.20 Aligned_cols=66 Identities=12% Similarity=0.118 Sum_probs=51.1
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++| |. +..++|+++++.|+ |||++++.|.... ..+.++|.++|+++||
T Consensus 124 ~l~-~~--~~~~~l~~~~~~L~---~gG~l~i~~~~~~--------------------------~~~~~~~~~~l~~~Gf 171 (215)
T 2zfu_A 124 SLM-GT--NIRDFLEEANRVLK---PGGLLKVAEVSSR--------------------------FEDVRTFLRAVTKLGF 171 (215)
T ss_dssp CCC-SS--CHHHHHHHHHHHEE---EEEEEEEEECGGG--------------------------CSCHHHHHHHHHHTTE
T ss_pred hcc-cc--CHHHHHHHHHHhCC---CCeEEEEEEcCCC--------------------------CCCHHHHHHHHHHCCC
Confidence 566 43 35889999999999 9999999874310 1189999999999999
Q ss_pred ceeEEEecCCcceEEEEe
Q 040309 82 SHYKITPILGVRSLIEAY 99 (100)
Q Consensus 82 ~~~~v~~~~~~~~vie~~ 99 (100)
+++++....+.+.++.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~ 189 (215)
T 2zfu_A 172 KIVSKDLTNSHFFLFDFQ 189 (215)
T ss_dssp EEEEEECCSTTCEEEEEE
T ss_pred EEEEEecCCCeEEEEEEE
Confidence 999876666666666654
No 52
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.15 E-value=1.2e-06 Score=59.20 Aligned_cols=81 Identities=15% Similarity=0.278 Sum_probs=54.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCC---CCCchhhhhhhhhhh--hcccccCceecCHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQ---SQDKESMETQLCFDI--LMVSLFRGKERSVDDWKKL 75 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~---~~~~~~~~~~~~~dl--~ml~~~~g~~rt~~e~~~l 75 (100)
+++|+++|. ..+|+++++.|+ |||.+++.+...... +.. + .....+.. ......++..++..++.++
T Consensus 113 ~~l~~~~~~--~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 184 (276)
T 3mgg_A 113 FVLEHLQSP--EEALKSLKKVLK---PGGTITVIEGDHGSCYFHPEG-K--KAIEAWNCLIRVQAYMKGNSLVGRQIYPL 184 (276)
T ss_dssp SCGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEECGGGCEEESCC-H--HHHHHHHHHHHHHHHTTCCTTGGGGHHHH
T ss_pred chhhhcCCH--HHHHHHHHHHcC---CCcEEEEEEcCCCCceECCCc-H--HHHHHHHHHHHHHHhcCCCcchHHHHHHH
Confidence 368888886 489999999999 999999998643221 111 1 11111111 1122335667788999999
Q ss_pred HHHcCCceeEEEec
Q 040309 76 FLAAGFSHYKITPI 89 (100)
Q Consensus 76 l~~aGf~~~~v~~~ 89 (100)
|++|||+++++.+.
T Consensus 185 l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 185 LQESGFEKIRVEPR 198 (276)
T ss_dssp HHHTTCEEEEEEEE
T ss_pred HHHCCCCeEEEeeE
Confidence 99999999988643
No 53
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.10 E-value=1.4e-05 Score=52.69 Aligned_cols=84 Identities=13% Similarity=0.235 Sum_probs=50.6
Q ss_pred ccccC-ChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCC----CCCchh-----------h------hhhhhhhhhcc
Q 040309 2 ILHNW-NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQ----SQDKES-----------M------ETQLCFDILMV 59 (100)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~----~~~~~~-----------~------~~~~~~dl~ml 59 (100)
++|++ ++++..++|+++++.|+ |||++++ +...+.. -....+ . ......++.++
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~~L~---pgG~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (243)
T 3d2l_A 106 SLNYLQTEADVKQTFDSAARLLT---DGGKLLF-DVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFF 181 (243)
T ss_dssp GGGGCCSHHHHHHHHHHHHHHEE---EEEEEEE-EEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHhcC---CCeEEEE-EcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEE
Confidence 56666 66788999999999999 9999886 3221100 000000 0 00001112222
Q ss_pred cccC-c-----------eecCHHHHHHHHHHcCCceeEEEec
Q 040309 60 SLFR-G-----------KERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 60 ~~~~-g-----------~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
...+ | +.+|.+|++++|++|||++++++..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 182 IEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp EECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred EEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 1111 2 4579999999999999999998753
No 54
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.08 E-value=1.1e-05 Score=53.08 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=51.9
Q ss_pred CccccCChHHHHHHHHHHH-HhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhh---------cccccCceecCHH
Q 040309 1 GILHNWNDEESVKLLKKCK-EAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDIL---------MVSLFRGKERSVD 70 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~-~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~---------ml~~~~g~~rt~~ 70 (100)
++||+++|. .++|++++ +.|+ |||++++.+..... . ........... -......+.+|.+
T Consensus 111 ~~l~~~~~~--~~~l~~~~~~~Lk---pgG~l~i~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (250)
T 2p7i_A 111 HVLEHIDDP--VALLKRINDDWLA---EGGRLFLVCPNANA---V--SRQIAVKMGIISHNSAVTEAEFAHGHRCTYALD 180 (250)
T ss_dssp SCGGGCSSH--HHHHHHHHHTTEE---EEEEEEEEEECTTC---H--HHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHH
T ss_pred hHHHhhcCH--HHHHHHHHHHhcC---CCCEEEEEcCChHH---H--HHHHHHHcCccccchhcccccccccccccCCHH
Confidence 478888875 69999999 9999 99999998743221 0 00000000000 0011234678999
Q ss_pred HHHHHHHHcCCceeEEEe
Q 040309 71 DWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 71 e~~~ll~~aGf~~~~v~~ 88 (100)
+|.++|+++||+++++..
T Consensus 181 ~~~~~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 181 TLERDASRAGLQVTYRSG 198 (250)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHCCCeEEEEee
Confidence 999999999999998764
No 55
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.07 E-value=1.9e-05 Score=51.80 Aligned_cols=79 Identities=18% Similarity=0.125 Sum_probs=52.1
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|.++|. .++|+++++.|+ |||++++.+...+ . +....................+|.++|.++|+++|
T Consensus 110 ~~l~~~~~~--~~~l~~~~~~L~---pgG~l~i~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G 179 (219)
T 1vlm_A 110 TTICFVDDP--ERALKEAYRILK---KGGYLIVGIVDRE----S-FLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAG 179 (219)
T ss_dssp SCGGGSSCH--HHHHHHHHHHEE---EEEEEEEEEECSS----S-HHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTT
T ss_pred chHhhccCH--HHHHHHHHHHcC---CCcEEEEEEeCCc----c-HHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCC
Confidence 367777664 689999999999 9999999875321 1 11011000000001112356689999999999999
Q ss_pred CceeEEEec
Q 040309 81 FSHYKITPI 89 (100)
Q Consensus 81 f~~~~v~~~ 89 (100)
|+++++...
T Consensus 180 f~~~~~~~~ 188 (219)
T 1vlm_A 180 FEEFKVVQT 188 (219)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEecc
Confidence 999988654
No 56
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.06 E-value=1.6e-05 Score=54.53 Aligned_cols=75 Identities=13% Similarity=-0.023 Sum_probs=49.7
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhh-hhhhhhhcccccCceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMET-QLCFDILMVSLFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~-~~~~dl~ml~~~~g~~rt~~e~~~ll~~a 79 (100)
++||+++|. .+.|+++++.|+ |||++++.+... + . ..... ...... +-.......++.++|.++|+++
T Consensus 143 ~~l~~~~d~--~~~l~~~~r~Lk---pgG~l~i~~~~~-~---~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~a 211 (292)
T 2aot_A 143 QMLYYVKDI--PATLKFFHSLLG---TNAKMLIIVVSG-S---S-GWDKLWKKYGSR-FPQDDLCQYITSDDLTQMLDNL 211 (292)
T ss_dssp SCGGGCSCH--HHHHHHHHHTEE---EEEEEEEEEECT-T---S-HHHHHHHHHGGG-SCCCTTCCCCCHHHHHHHHHHH
T ss_pred eeeeecCCH--HHHHHHHHHHcC---CCcEEEEEEecC-C---c-cHHHHHHHHHHh-ccCCCcccCCCHHHHHHHHHHC
Confidence 479999985 678999999999 999999996431 1 1 11010 001110 0000123567999999999999
Q ss_pred CCceeEE
Q 040309 80 GFSHYKI 86 (100)
Q Consensus 80 Gf~~~~v 86 (100)
||+++..
T Consensus 212 Gf~~~~~ 218 (292)
T 2aot_A 212 GLKYECY 218 (292)
T ss_dssp TCCEEEE
T ss_pred CCceEEE
Confidence 9998774
No 57
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.01 E-value=2.4e-05 Score=52.67 Aligned_cols=83 Identities=10% Similarity=0.043 Sum_probs=52.3
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhh-hhhhhhhc--cc---ccC-ceecCHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMET-QLCFDILM--VS---LFR-GKERSVDDWK 73 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~-~~~~dl~m--l~---~~~-g~~rt~~e~~ 73 (100)
+++|++++... +++.++..++ |||++++.+...+...... .... .....-.+ .. ..+ ...+|.++|.
T Consensus 130 ~~l~~~~~~~~--~~~~~~~l~~---~gG~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 203 (275)
T 3bkx_A 130 HSLWYFASANA--LALLFKNMAA---VCDHVDVAEWSMQPTALDQ-IGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLA 203 (275)
T ss_dssp SCGGGSSCHHH--HHHHHHHHTT---TCSEEEEEEECSSCSSGGG-HHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHH
T ss_pred cchhhCCCHHH--HHHHHHHHhC---CCCEEEEEEecCCCCchhh-hhHHHHHHHHHHHhhccccccccccccCCHHHHH
Confidence 36888888753 6777777677 7999999998876543221 1000 00100000 00 111 2467999999
Q ss_pred HHHHHcCCceeEEEec
Q 040309 74 KLFLAAGFSHYKITPI 89 (100)
Q Consensus 74 ~ll~~aGf~~~~v~~~ 89 (100)
+++++|||+++++...
T Consensus 204 ~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 204 QIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHTCEEEECCCB
T ss_pred HHHHHCCCeeEEEEEe
Confidence 9999999999987654
No 58
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.00 E-value=1.4e-05 Score=50.71 Aligned_cols=56 Identities=9% Similarity=0.154 Sum_probs=42.3
Q ss_pred ccccC-ChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 2 ILHNW-NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 2 vlHdw-~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
++|.. +|. .++|+++++.|+ |||++++.+........ ....|+.++|.++|+++|
T Consensus 72 ~l~~~~~~~--~~~l~~~~r~Lk---pgG~l~~~~~~~~~~~~-------------------~~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 72 VPGSTTLHS--AEILAEIARILR---PGGCLFLKEPVETAVDN-------------------NSKVKTASKLCSALTLSG 127 (176)
T ss_dssp STTCCCCCC--HHHHHHHHHHEE---EEEEEEEEEEEESSSCS-------------------SSSSCCHHHHHHHHHHTT
T ss_pred hhhhcccCH--HHHHHHHHHHCC---CCEEEEEEccccccccc-------------------ccccCCHHHHHHHHHHCC
Confidence 57777 553 789999999999 99999996654321110 223468999999999999
Q ss_pred C
Q 040309 81 F 81 (100)
Q Consensus 81 f 81 (100)
|
T Consensus 128 f 128 (176)
T 2ld4_A 128 L 128 (176)
T ss_dssp C
T ss_pred C
Confidence 9
No 59
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.99 E-value=8.1e-06 Score=54.46 Aligned_cols=75 Identities=8% Similarity=0.021 Sum_probs=52.5
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|+++ -.++|+++++.|+ |||++++.+.......... .....+.- .....+|.++|.++|+++||
T Consensus 123 ~l~~~~---~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~l~~aGf 188 (257)
T 3f4k_A 123 AIYNIG---FERGMNEWSKYLK---KGGFIAVSEASWFTSERPA---EIEDFWMD-----AYPEISVIPTCIDKMERAGY 188 (257)
T ss_dssp CSCCCC---HHHHHHHHHTTEE---EEEEEEEEEEEESSSCCCH---HHHHHHHH-----HCTTCCBHHHHHHHHHHTTE
T ss_pred hHhhcC---HHHHHHHHHHHcC---CCcEEEEEEeeccCCCChH---HHHHHHHH-----hCCCCCCHHHHHHHHHHCCC
Confidence 567773 4679999999999 9999999997644333221 11111111 11336799999999999999
Q ss_pred ceeEEEecC
Q 040309 82 SHYKITPIL 90 (100)
Q Consensus 82 ~~~~v~~~~ 90 (100)
+++++...+
T Consensus 189 ~~v~~~~~~ 197 (257)
T 3f4k_A 189 TPTAHFILP 197 (257)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEECC
Confidence 999987654
No 60
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=97.97 E-value=4e-06 Score=57.06 Aligned_cols=85 Identities=12% Similarity=0.024 Sum_probs=53.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchh-hhhhhhhhhh----cccccCceecCHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKES-METQLCFDIL----MVSLFRGKERSVDDWKKL 75 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~-~~~~~~~dl~----ml~~~~g~~rt~~e~~~l 75 (100)
+++|+++|. .++|+++++.|+ |||++++.+...+........ .......... .........+|.+++.++
T Consensus 144 ~~l~~~~~~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 218 (285)
T 4htf_A 144 AVLEWVADP--RSVLQTLWSVLR---PGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLW 218 (285)
T ss_dssp SCGGGCSCH--HHHHHHHHHTEE---EEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHH
T ss_pred chhhcccCH--HHHHHHHHHHcC---CCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHH
Confidence 367888775 689999999999 999999987643211000000 0000000000 001112456799999999
Q ss_pred HHHcCCceeEEEecC
Q 040309 76 FLAAGFSHYKITPIL 90 (100)
Q Consensus 76 l~~aGf~~~~v~~~~ 90 (100)
|+++||+++++....
T Consensus 219 l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 219 LEEAGWQIMGKTGVR 233 (285)
T ss_dssp HHHTTCEEEEEEEES
T ss_pred HHHCCCceeeeeeEE
Confidence 999999999887654
No 61
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.95 E-value=3e-05 Score=55.53 Aligned_cols=76 Identities=9% Similarity=-0.022 Sum_probs=53.6
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+++| -.++|+++++.|+ |||++++....... ......+..........+|.++|.++++++|
T Consensus 179 ~vl~h~~d--~~~~l~~~~r~Lk---pgG~l~i~~~~~~~---------~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aG 244 (416)
T 4e2x_A 179 NTLCHIPY--VQSVLEGVDALLA---PDGVFVFEDPYLGD---------IVAKTSFDQIFDEHFFLFSATSVQGMAQRCG 244 (416)
T ss_dssp SCGGGCTT--HHHHHHHHHHHEE---EEEEEEEEEECHHH---------HHHHTCGGGCSTTCCEECCHHHHHHHHHHTT
T ss_pred ChHHhcCC--HHHHHHHHHHHcC---CCeEEEEEeCChHH---------hhhhcchhhhhhhhhhcCCHHHHHHHHHHcC
Confidence 47899986 5899999999999 99999986543211 0000111111123456789999999999999
Q ss_pred CceeEEEecC
Q 040309 81 FSHYKITPIL 90 (100)
Q Consensus 81 f~~~~v~~~~ 90 (100)
|+++++....
T Consensus 245 f~~~~~~~~~ 254 (416)
T 4e2x_A 245 FELVDVQRLP 254 (416)
T ss_dssp EEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 9999987754
No 62
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=97.94 E-value=5.7e-06 Score=55.23 Aligned_cols=83 Identities=14% Similarity=0.133 Sum_probs=49.9
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec------------CCCCCCchhhhhhhhhh-----hhccc-cc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI------------ENQSQDKESMETQLCFD-----ILMVS-LF 62 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~------------~~~~~~~~~~~~~~~~d-----l~ml~-~~ 62 (100)
+++|+++| ..++|+++++.|+ |||++++..... +..+..... .....++ ...+. ..
T Consensus 116 ~~l~~~~~--~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 189 (253)
T 3g5l_A 116 LALHYIAS--FDDICKKVYINLK---SSGSFIFSVEHPVFTADGRQDWYTDETGNKLHW-PVDRYFNESMRTSHFLGEDV 189 (253)
T ss_dssp SCGGGCSC--HHHHHHHHHHHEE---EEEEEEEEEECHHHHSSSSCSCEECSSCCEEEE-EECCTTCCCEEEEEETTEEE
T ss_pred hhhhhhhh--HHHHHHHHHHHcC---CCcEEEEEeCCCccccCccccceeccCCceEEE-EeccccccceEEEeeccccC
Confidence 36788866 5899999999999 999999874321 111000000 0000000 00000 11
Q ss_pred CceecCHHHHHHHHHHcCCceeEEEec
Q 040309 63 RGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 63 ~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
....||.++|.++|++|||+++++...
T Consensus 190 ~~~~~t~~~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 190 QKYHRTVTTYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp EEECCCHHHHHHHHHHTTEEEEEEECC
T ss_pred ccEecCHHHHHHHHHHcCCeeeeeecC
Confidence 123359999999999999999998744
No 63
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.89 E-value=1.9e-05 Score=53.24 Aligned_cols=75 Identities=9% Similarity=0.042 Sum_probs=53.4
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|.++ -.++|+++++.|+ |||++++.+.......... .....+. ......+|.+++.++++++||
T Consensus 123 ~~~~~~---~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~l~~aGf 188 (267)
T 3kkz_A 123 AIYNIG---FERGLNEWRKYLK---KGGYLAVSECSWFTDERPA---EINDFWM-----DAYPEIDTIPNQVAKIHKAGY 188 (267)
T ss_dssp CGGGTC---HHHHHHHHGGGEE---EEEEEEEEEEEESSSCCCH---HHHHHHH-----HHCTTCEEHHHHHHHHHHTTE
T ss_pred CceecC---HHHHHHHHHHHcC---CCCEEEEEEeeecCCCChH---HHHHHHH-----HhCCCCCCHHHHHHHHHHCCC
Confidence 567773 3678999999999 9999999998755433321 1111111 112345789999999999999
Q ss_pred ceeEEEecC
Q 040309 82 SHYKITPIL 90 (100)
Q Consensus 82 ~~~~v~~~~ 90 (100)
+++++...+
T Consensus 189 ~~v~~~~~~ 197 (267)
T 3kkz_A 189 LPVATFILP 197 (267)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEECC
Confidence 999987764
No 64
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.89 E-value=1.9e-05 Score=51.45 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=51.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhh----hh---hcccccCceecCHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF----DI---LMVSLFRGKERSVDDWK 73 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~----dl---~ml~~~~g~~rt~~e~~ 73 (100)
+++|+++|. .++|+++++.|+ |||++++....... .. ...... .. ........+.+|.++|.
T Consensus 101 ~~l~~~~~~--~~~l~~~~~~L~---~gG~l~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (230)
T 3cc8_A 101 DVLEHLFDP--WAVIEKVKPYIK---QNGVILASIPNVSH---IS---VLAPLLAGNWTYTEYGLLDKTHIRFFTFNEML 169 (230)
T ss_dssp SCGGGSSCH--HHHHHHTGGGEE---EEEEEEEEEECTTS---HH---HHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHH
T ss_pred ChhhhcCCH--HHHHHHHHHHcC---CCCEEEEEeCCcch---HH---HHHHHhcCCceeccCCCCCcceEEEecHHHHH
Confidence 367888775 589999999999 99999997643221 00 000000 00 00111123568999999
Q ss_pred HHHHHcCCceeEEEec
Q 040309 74 KLFLAAGFSHYKITPI 89 (100)
Q Consensus 74 ~ll~~aGf~~~~v~~~ 89 (100)
++|+++||+++++...
T Consensus 170 ~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 170 RMFLKAGYSISKVDRV 185 (230)
T ss_dssp HHHHHTTEEEEEEEEE
T ss_pred HHHHHcCCeEEEEEec
Confidence 9999999999988764
No 65
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.84 E-value=6.5e-05 Score=47.54 Aligned_cols=59 Identities=14% Similarity=0.143 Sum_probs=48.5
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|..++++..++|+++++.|+ |||++++.... ...++.++|.++++++||
T Consensus 117 ~~~~~~~~~~~~~l~~~~~~l~---~~G~l~~~~~~--------------------------~~~~~~~~~~~~l~~~Gf 167 (195)
T 3cgg_A 117 VMGFLAEDGREPALANIHRALG---ADGRAVIGFGA--------------------------GRGWVFGDFLEVAERVGL 167 (195)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEET--------------------------TSSCCHHHHHHHHHHHTE
T ss_pred HHhhcChHHHHHHHHHHHHHhC---CCCEEEEEeCC--------------------------CCCcCHHHHHHHHHHcCC
Confidence 6788888889999999999999 89999886421 012689999999999999
Q ss_pred ceeEEEec
Q 040309 82 SHYKITPI 89 (100)
Q Consensus 82 ~~~~v~~~ 89 (100)
++.++...
T Consensus 168 ~~~~~~~~ 175 (195)
T 3cgg_A 168 ELENAFES 175 (195)
T ss_dssp EEEEEESS
T ss_pred EEeeeecc
Confidence 99988643
No 66
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.81 E-value=2.1e-05 Score=54.60 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=52.1
Q ss_pred ccccCChHH-HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 2 ILHNWNDEE-SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 2 vlHdw~d~~-~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+||..+|++ ...+|++++++|+ |||.|++.+...+.. + . ....+.+..--.......||.+|+.++|. |
T Consensus 169 vLH~l~d~~~p~~~l~~l~~~L~---PGG~Lvls~~~~d~~--p-~--~~~~~~~~~~~~g~p~~~rs~~ei~~~f~--G 238 (277)
T 3giw_A 169 IVHFVLDEDDAVGIVRRLLEPLP---SGSYLAMSIGTAEFA--P-Q--EVGRVAREYAARNMPMRLRTHAEAEEFFE--G 238 (277)
T ss_dssp CGGGSCGGGCHHHHHHHHHTTSC---TTCEEEEEEECCTTS--H-H--HHHHHHHHHHHTTCCCCCCCHHHHHHTTT--T
T ss_pred hHhcCCchhhHHHHHHHHHHhCC---CCcEEEEEeccCCCC--H-H--HHHHHHHHHHhcCCCCccCCHHHHHHHhC--C
Confidence 689898876 6899999999999 999999998765421 1 1 11222222211222356799999999995 9
Q ss_pred CceeE
Q 040309 81 FSHYK 85 (100)
Q Consensus 81 f~~~~ 85 (100)
|++++
T Consensus 239 lelve 243 (277)
T 3giw_A 239 LELVE 243 (277)
T ss_dssp SEECT
T ss_pred CcccC
Confidence 99765
No 67
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.80 E-value=3.2e-05 Score=50.96 Aligned_cols=84 Identities=13% Similarity=0.155 Sum_probs=50.3
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecC--CCCCCc-hhhh-------hhhhhh-----hhccc-ccCc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE--NQSQDK-ESME-------TQLCFD-----ILMVS-LFRG 64 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~--~~~~~~-~~~~-------~~~~~d-----l~ml~-~~~g 64 (100)
+++|+++| ..++|+++++.|+ |||++++...... ...... .... ....+. ...+. ....
T Consensus 115 ~~l~~~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (243)
T 3bkw_A 115 LALHYVED--VARLFRTVHQALS---PGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVK 189 (243)
T ss_dssp SCGGGCSC--HHHHHHHHHHHEE---EEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCE
T ss_pred ccccccch--HHHHHHHHHHhcC---cCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEE
Confidence 36788876 4789999999999 9999999774211 000000 0000 000000 00000 1123
Q ss_pred eecCHHHHHHHHHHcCCceeEEEec
Q 040309 65 KERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
..+|.++|.++|++|||+++++...
T Consensus 190 ~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 190 HHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp EECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred EeccHHHHHHHHHHcCCEeeeeccC
Confidence 4479999999999999999998754
No 68
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.78 E-value=5.1e-05 Score=50.29 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=52.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCC---------CchhhhhhhhhhhhcccccCceecCHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQ---------DKESMETQLCFDILMVSLFRGKERSVDD 71 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~---------~~~~~~~~~~~dl~ml~~~~g~~rt~~e 71 (100)
+++|..++++..++|++++++|+ |||+++|.|...++... .++. .....+. ........+.++
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~ 203 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLG---KQGAMYLIELGTGCIDFFNSLLEKYGQLPY-ELLLVME----HGIRPGIFTAED 203 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHT---TTCEEEEEEECTTHHHHHHHHHHHHSSCCH-HHHHHHT----TTCCCCCCCHHH
T ss_pred chhhcCCHHHHHHHHHHHHHHcC---CCCEEEEEeCCccccHHHHHHHhCCCCCch-hhhhccc----cCCCCCccCHHH
Confidence 36889998889999999999999 99999999986543110 0000 0000110 011122479999
Q ss_pred HHHHHHHcCCceeEEEe
Q 040309 72 WKKLFLAAGFSHYKITP 88 (100)
Q Consensus 72 ~~~ll~~aGf~~~~v~~ 88 (100)
+.++| +||+++....
T Consensus 204 ~~~~~--aGf~~~~~~~ 218 (245)
T 3ggd_A 204 IELYF--PDFEILSQGE 218 (245)
T ss_dssp HHHHC--TTEEEEEEEC
T ss_pred HHHHh--CCCEEEeccc
Confidence 99999 9999987643
No 69
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.69 E-value=2.5e-05 Score=50.44 Aligned_cols=82 Identities=12% Similarity=0.106 Sum_probs=54.5
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc--hhhhhhhhhhhhcccccCceecCHHHHHHHHHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK--ESMETQLCFDILMVSLFRGKERSVDDWKKLFLA 78 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~--~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~ 78 (100)
+++|++++++..++|+++++.|+ |||++++.+...++..... +.... ....+.-.....++.+|.+|+.++|++
T Consensus 97 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~~~~~~~ 172 (209)
T 2p8j_A 97 GTIFHMRKNDVKEAIDEIKRVLK---PGGLACINFLTTKDERYNKGEKIGEG-EFLQLERGEKVIHSYVSLEEADKYFKD 172 (209)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE---EEEEEEEEEEETTSTTTTCSEEEETT-EEEECC-CCCEEEEEECHHHHHHTTTT
T ss_pred ChHHhCCHHHHHHHHHHHHHHcC---CCcEEEEEEecccchhccchhhhccc-cceeccCCCceeEEecCHHHHHHHHhh
Confidence 36888988889999999999999 9999999998765433210 00000 000000000112366799999999999
Q ss_pred cCCceeEE
Q 040309 79 AGFSHYKI 86 (100)
Q Consensus 79 aGf~~~~v 86 (100)
+||...+.
T Consensus 173 ~g~~~~~~ 180 (209)
T 2p8j_A 173 MKVLFKED 180 (209)
T ss_dssp SEEEEEEE
T ss_pred cCceeeee
Confidence 99876654
No 70
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.69 E-value=3.9e-05 Score=52.32 Aligned_cols=82 Identities=11% Similarity=0.124 Sum_probs=50.9
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeee-----cC---CCCCCchhhhhhhhhhhhc--ccccCceecCHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA-----IE---NQSQDKESMETQLCFDILM--VSLFRGKERSVDD 71 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v-----~~---~~~~~~~~~~~~~~~dl~m--l~~~~g~~rt~~e 71 (100)
++|.++|. .++|+++++.|+ |||++++.|.. .. ++...++......+..+.. ....+....+..+
T Consensus 98 ~l~~~~~~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (284)
T 3gu3_A 98 FLLHMTTP--ETMLQKMIHSVK---KGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMK 172 (284)
T ss_dssp CGGGCSSH--HHHHHHHHHTEE---EEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGT
T ss_pred hhhcCCCH--HHHHHHHHHHcC---CCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHH
Confidence 67888775 599999999999 99999999865 11 1111110000111111110 1122344566779
Q ss_pred HHHHHHHcCCceeEEEe
Q 040309 72 WKKLFLAAGFSHYKITP 88 (100)
Q Consensus 72 ~~~ll~~aGf~~~~v~~ 88 (100)
+.++|++|||+.+++..
T Consensus 173 l~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 173 IPIYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHcCCCeEEEEE
Confidence 99999999999987743
No 71
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.61 E-value=0.00015 Score=47.30 Aligned_cols=67 Identities=4% Similarity=0.050 Sum_probs=48.0
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|..++++..++++++++.|+ |||+++++....+..... ......|.+|+++++++ ||
T Consensus 110 ~l~~l~~~~~~~~l~~~~r~Lk---pgG~~~l~~~~~~~~~~~-----------------~~~~~~~~~el~~~~~~-gf 168 (203)
T 1pjz_A 110 AMIALPADMRERYVQHLEALMP---QACSGLLITLEYDQALLE-----------------GPPFSVPQTWLHRVMSG-NW 168 (203)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSC---SEEEEEEEEESSCSSSSS-----------------SCCCCCCHHHHHHTSCS-SE
T ss_pred chhhCCHHHHHHHHHHHHHHcC---CCcEEEEEEEecCccccC-----------------CCCCCCCHHHHHHHhcC-Cc
Confidence 5788888888899999999999 999955554333211100 00112589999999998 99
Q ss_pred ceeEEEec
Q 040309 82 SHYKITPI 89 (100)
Q Consensus 82 ~~~~v~~~ 89 (100)
++..+...
T Consensus 169 ~i~~~~~~ 176 (203)
T 1pjz_A 169 EVTKVGGQ 176 (203)
T ss_dssp EEEEEEES
T ss_pred EEEEeccc
Confidence 98877654
No 72
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=97.60 E-value=0.00017 Score=46.97 Aligned_cols=76 Identities=5% Similarity=-0.161 Sum_probs=47.3
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHH----HHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWK----KLF 76 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~----~ll 76 (100)
+++|++++++..++|+++++.|+ |||.+++........ ....+....+.-.......|.++++ .++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~li~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (217)
T 3jwh_A 110 EVIEHLDLSRLGAFERVLFEFAQ---PKIVIVTTPNIEYNV-------KFANLPAGKLRHKDHRFEWTRSQFQNWANKIT 179 (217)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTC---CSEEEEEEEBHHHHH-------HTC-----------CCSCBCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHcC---CCEEEEEccCcccch-------hhcccccccccccccccccCHHHHHHHHHHHH
Confidence 47899999999999999999999 899776655421000 0000000000011224557999999 888
Q ss_pred HHcCCceeEE
Q 040309 77 LAAGFSHYKI 86 (100)
Q Consensus 77 ~~aGf~~~~v 86 (100)
+++||++.-.
T Consensus 180 ~~~Gf~v~~~ 189 (217)
T 3jwh_A 180 ERFAYNVQFQ 189 (217)
T ss_dssp HHSSEEEEEC
T ss_pred HHcCceEEEE
Confidence 8999987543
No 73
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=97.60 E-value=0.00027 Score=46.01 Aligned_cols=76 Identities=9% Similarity=-0.022 Sum_probs=47.0
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHH----HHH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWK----KLF 76 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~----~ll 76 (100)
+++|++++++..++|+++++.|+ |||.+++...... ...-. ......+.-.......|.++++ +++
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~Lk---pgG~~i~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 179 (219)
T 3jwg_A 110 EVIEHLDENRLQAFEKVLFEFTR---PQTVIVSTPNKEY-NFHYG------NLFEGNLRHRDHRFEWTRKEFQTWAVKVA 179 (219)
T ss_dssp SCGGGCCHHHHHHHHHHHHTTTC---CSEEEEEEEBGGG-GGCCC------CT-----GGGCCTTSBCHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHhhC---CCEEEEEccchhh-hhhhc------ccCcccccccCceeeecHHHHHHHHHHHH
Confidence 47899999999999999999999 8996655543211 10000 0000000011224456899999 778
Q ss_pred HHcCCceeEE
Q 040309 77 LAAGFSHYKI 86 (100)
Q Consensus 77 ~~aGf~~~~v 86 (100)
+++||++.-.
T Consensus 180 ~~~Gf~v~~~ 189 (219)
T 3jwg_A 180 EKYGYSVRFL 189 (219)
T ss_dssp HHHTEEEEEE
T ss_pred HHCCcEEEEE
Confidence 8899977543
No 74
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.55 E-value=0.0001 Score=47.62 Aligned_cols=64 Identities=13% Similarity=0.047 Sum_probs=51.1
Q ss_pred CChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeE
Q 040309 6 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 6 w~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~ 85 (100)
..-+...++++++++.|+ |||++++.+.... +.+++.++++++||+.++
T Consensus 133 ~~~~~~~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~~~~~~~~~Gf~~~~ 181 (205)
T 3grz_A 133 ILAEILLDLIPQLDSHLN---EDGQVIFSGIDYL----------------------------QLPKIEQALAENSFQIDL 181 (205)
T ss_dssp SCHHHHHHHGGGSGGGEE---EEEEEEEEEEEGG----------------------------GHHHHHHHHHHTTEEEEE
T ss_pred CcHHHHHHHHHHHHHhcC---CCCEEEEEecCcc----------------------------cHHHHHHHHHHcCCceEE
Confidence 344456788999999999 8999988654321 477899999999999999
Q ss_pred EEecCCcceEEEEeC
Q 040309 86 ITPILGVRSLIEAYP 100 (100)
Q Consensus 86 v~~~~~~~~vie~~p 100 (100)
+....++.+++.-+|
T Consensus 182 ~~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 182 KMRAGRWIGLAISRK 196 (205)
T ss_dssp EEEETTEEEEEEEEC
T ss_pred eeccCCEEEEEEecc
Confidence 988888888887665
No 75
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.55 E-value=0.00014 Score=49.22 Aligned_cols=85 Identities=9% Similarity=-0.009 Sum_probs=52.2
Q ss_pred cccc--CChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCC-------CCCchhh-----------h-hhhhhhhhcc-
Q 040309 2 ILHN--WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQ-------SQDKESM-----------E-TQLCFDILMV- 59 (100)
Q Consensus 2 vlHd--w~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~-------~~~~~~~-----------~-~~~~~dl~ml- 59 (100)
++|. .+.++..++|+++++.|+ |||++++.....+.. ....+.. . ......+.+.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 218 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLR---PGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLD 218 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEE---EEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETT
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcC---CCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEch
Confidence 4666 677888999999999999 999999887432100 0000000 0 0000000000
Q ss_pred -c-ccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 60 -S-LFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 60 -~-~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
. ....+.+|.++|+++|+++||+++++...
T Consensus 219 ~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 219 SVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp SCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred hhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 0 11135569999999999999999988654
No 76
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.54 E-value=0.00013 Score=49.56 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=28.9
Q ss_pred CccccCCh-----HHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 1 GILHNWND-----EESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 1 ~vlHdw~d-----~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
+++|+++| ++..++|+++++.|+ |||++++...
T Consensus 139 ~~l~~~~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~ 176 (293)
T 3thr_A 139 NSFAHLPDSKGDQSEHRLALKNIASMVR---PGGLLVIDHR 176 (293)
T ss_dssp TCGGGSCCSSSSSHHHHHHHHHHHHTEE---EEEEEEEEEE
T ss_pred hHHhhcCccccCHHHHHHHHHHHHHHcC---CCeEEEEEeC
Confidence 36788888 889999999999999 9999998764
No 77
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=97.54 E-value=9.6e-05 Score=47.11 Aligned_cols=68 Identities=9% Similarity=0.056 Sum_probs=51.9
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|.+++++..++|+++++.|+ |||++++++...++....+ ......++.++++++|++
T Consensus 105 ~~l~~~~~~~~~~~l~~~~~~L~---~gG~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-- 164 (199)
T 2xvm_A 105 VVLMFLEAKTIPGLIANMQRCTK---PGGYNLIVAAMDTADYPCT---------------VGFPFAFKEGELRRYYEG-- 164 (199)
T ss_dssp SCGGGSCGGGHHHHHHHHHHTEE---EEEEEEEEEEBCCSSSCCC---------------SCCSCCBCTTHHHHHTTT--
T ss_pred chhhhCCHHHHHHHHHHHHHhcC---CCeEEEEEEeeccCCcCCC---------------CCCCCccCHHHHHHHhcC--
Confidence 36888998889999999999999 9999999987765432210 012345688999999987
Q ss_pred CceeEEEe
Q 040309 81 FSHYKITP 88 (100)
Q Consensus 81 f~~~~v~~ 88 (100)
|++++...
T Consensus 165 f~~~~~~~ 172 (199)
T 2xvm_A 165 WERVKYNE 172 (199)
T ss_dssp SEEEEEEC
T ss_pred CeEEEecc
Confidence 99888753
No 78
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.50 E-value=7.9e-05 Score=50.79 Aligned_cols=71 Identities=11% Similarity=0.143 Sum_probs=47.7
Q ss_pred ccccCCh--HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHc
Q 040309 2 ILHNWND--EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 2 vlHdw~d--~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~a 79 (100)
+||..++ ++-.++|+++++.|+ |||++++.+..-.. . + .. -+. ......+|.++|.++|+++
T Consensus 183 ~l~~~~~~~~~~~~~l~~~~r~Lk---pGG~l~~~~~~~~~-~----~-~~---~~~----~~~~~~~~~~~l~~~l~~a 246 (289)
T 2g72_A 183 CLEAVSPDLASFQRALDHITTLLR---PGGHLLLIGALEES-W----Y-LA---GEA----RLTVVPVSEEEVREALVRS 246 (289)
T ss_dssp CHHHHCSSHHHHHHHHHHHHTTEE---EEEEEEEEEEESCC-E----E-EE---TTE----EEECCCCCHHHHHHHHHHT
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcC---CCCEEEEEEecCcc-e----E-Ec---CCe----eeeeccCCHHHHHHHHHHc
Confidence 4455333 367899999999999 99999998744211 0 0 00 000 0012346999999999999
Q ss_pred CCceeEEEe
Q 040309 80 GFSHYKITP 88 (100)
Q Consensus 80 Gf~~~~v~~ 88 (100)
||+++++..
T Consensus 247 Gf~~~~~~~ 255 (289)
T 2g72_A 247 GYKVRDLRT 255 (289)
T ss_dssp TEEEEEEEE
T ss_pred CCeEEEeeE
Confidence 999988754
No 79
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.49 E-value=0.00028 Score=47.75 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=49.3
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhh---cc----cccCceecCHHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDIL---MV----SLFRGKERSVDDWKK 74 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~---ml----~~~~g~~rt~~e~~~ 74 (100)
++|.++|. .++|++++++|+ |||++++....... ..+. ...+.... -. ....-..++.++|.+
T Consensus 126 ~l~~~~d~--~~~l~~~~~~Lk---pgG~l~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (279)
T 3ccf_A 126 MLHWVKEP--EAAIASIHQALK---SGGRFVAEFGGKGN---IKYI--LEALYNALETLGIHNPQALNPWYFPSIGEYVN 195 (279)
T ss_dssp CGGGCSCH--HHHHHHHHHHEE---EEEEEEEEEECTTT---THHH--HHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHH
T ss_pred hhhhCcCH--HHHHHHHHHhcC---CCcEEEEEecCCcc---hHHH--HHHHHHHHHhcCCccccCcCceeCCCHHHHHH
Confidence 67777764 689999999999 99999987643211 1111 01111100 00 001124568999999
Q ss_pred HHHHcCCceeEEEec
Q 040309 75 LFLAAGFSHYKITPI 89 (100)
Q Consensus 75 ll~~aGf~~~~v~~~ 89 (100)
+|+++||+++++...
T Consensus 196 ~l~~aGf~~~~~~~~ 210 (279)
T 3ccf_A 196 ILEKQGFDVTYAALF 210 (279)
T ss_dssp HHHHHTEEEEEEEEE
T ss_pred HHHHcCCEEEEEEEe
Confidence 999999999887543
No 80
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.47 E-value=0.00017 Score=47.97 Aligned_cols=65 Identities=12% Similarity=0.144 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
++..++|+++++.|+ |||++++.+..-+. . + ... +. .......+.+++.++|+++||+++++..
T Consensus 175 ~~~~~~l~~~~~~Lk---pgG~li~~~~~~~~---~--~-~~~---~~----~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 238 (265)
T 2i62_A 175 PAYRTALRNLGSLLK---PGGFLVMVDALKSS---Y--Y-MIG---EQ----KFSSLPLGWETVRDAVEEAGYTIEQFEV 238 (265)
T ss_dssp HHHHHHHHHHHTTEE---EEEEEEEEEESSCC---E--E-EET---TE----EEECCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHhhCC---CCcEEEEEecCCCc---e--E-EcC---Cc----cccccccCHHHHHHHHHHCCCEEEEEEE
Confidence 357899999999999 99999999843221 0 0 000 00 0112345889999999999999998865
Q ss_pred c
Q 040309 89 I 89 (100)
Q Consensus 89 ~ 89 (100)
.
T Consensus 239 ~ 239 (265)
T 2i62_A 239 I 239 (265)
T ss_dssp E
T ss_pred e
Confidence 4
No 81
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.46 E-value=0.00028 Score=46.60 Aligned_cols=76 Identities=17% Similarity=0.206 Sum_probs=48.4
Q ss_pred ccccCChH-HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 2 ILHNWNDE-ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 2 vlHdw~d~-~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
|+|+.++. +...+|+++++.|+ |||++++. ..........+. . ....+++. +|+++|
T Consensus 147 v~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~-~~~~~~~~~~~~---~--------------~~~~~~l~-~l~~~G 204 (230)
T 1fbn_A 147 IYEDVAQPNQAEILIKNAKWFLK---KGGYGMIA-IKARSIDVTKDP---K--------------EIFKEQKE-ILEAGG 204 (230)
T ss_dssp EEECCCSTTHHHHHHHHHHHHEE---EEEEEEEE-EEGGGTCSSSCH---H--------------HHHHHHHH-HHHHHT
T ss_pred EEEecCChhHHHHHHHHHHHhCC---CCcEEEEE-EecCCCCCCCCH---H--------------HhhHHHHH-HHHHCC
Confidence 45776554 44667999999999 99999997 221111111110 0 01136788 999999
Q ss_pred CceeEEEecCCc---ceEEEEe
Q 040309 81 FSHYKITPILGV---RSLIEAY 99 (100)
Q Consensus 81 f~~~~v~~~~~~---~~vie~~ 99 (100)
|+.+++..+... +.++.++
T Consensus 205 f~~~~~~~~~~~~~~~~~v~~~ 226 (230)
T 1fbn_A 205 FKIVDEVDIEPFEKDHVMFVGI 226 (230)
T ss_dssp EEEEEEEECTTTSTTEEEEEEE
T ss_pred CEEEEEEccCCCccceEEEEEE
Confidence 999998877543 5555543
No 82
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.40 E-value=0.00028 Score=47.45 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=49.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
+++|+++| ..++|+++++.|+ ||++++.+...+..... + ....+.- +....+...++.+++. +|++||
T Consensus 102 ~~l~~~~~--~~~~l~~~~~~Lk----gG~~~~~~~~~~~~~~~--~--~~~~~~~-~~~~~~~~~~~~~~~~-~l~~aG 169 (261)
T 3ege_A 102 LAIHHFSH--LEKSFQEMQRIIR----DGTIVLLTFDIRLAQRI--W--LYDYFPF-LWEDALRFLPLDEQIN-LLQENT 169 (261)
T ss_dssp SCGGGCSS--HHHHHHHHHHHBC----SSCEEEEEECGGGCCCC--G--GGGTCHH-HHHHHHTSCCHHHHHH-HHHHHH
T ss_pred chHhhccC--HHHHHHHHHHHhC----CcEEEEEEcCCchhHHH--H--HHHHHHH-HhhhhhhhCCCHHHHH-HHHHcC
Confidence 36888866 4789999999999 79999999754322211 0 0001100 0111124456778889 999999
Q ss_pred CceeEEEec
Q 040309 81 FSHYKITPI 89 (100)
Q Consensus 81 f~~~~v~~~ 89 (100)
|+.+++...
T Consensus 170 F~~v~~~~~ 178 (261)
T 3ege_A 170 KRRVEAIPF 178 (261)
T ss_dssp CSEEEEEEC
T ss_pred CCceeEEEe
Confidence 999888654
No 83
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.36 E-value=0.0004 Score=46.84 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
++-.++|+++++.|+ |||++++.+..-+. . + ... + ........|.+++.++|+++||+++++..
T Consensus 174 ~~~~~~l~~i~r~LK---PGG~li~~~~~~~~-~----~-~~g---~----~~~~~~~~~~~~l~~~l~~aGF~i~~~~~ 237 (263)
T 2a14_A 174 DAYRAALCNLASLLK---PGGHLVTTVTLRLP-S----Y-MVG---K----REFSCVALEKGEVEQAVLDAGFDIEQLLH 237 (263)
T ss_dssp HHHHHHHHHHHTTEE---EEEEEEEEEESSCC-E----E-EET---T----EEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHHHHcC---CCcEEEEEEeecCc-c----c-eeC---C----eEeeccccCHHHHHHHHHHCCCEEEEEee
Confidence 566889999999999 99999998754211 0 0 000 0 00112245899999999999999998865
Q ss_pred c
Q 040309 89 I 89 (100)
Q Consensus 89 ~ 89 (100)
.
T Consensus 238 ~ 238 (263)
T 2a14_A 238 S 238 (263)
T ss_dssp E
T ss_pred c
Confidence 3
No 84
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.35 E-value=0.00017 Score=47.90 Aligned_cols=78 Identities=10% Similarity=0.026 Sum_probs=47.5
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCch--hh-hhhhhhhhhcccc-cCceecCHHHHHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKE--SM-ETQLCFDILMVSL-FRGKERSVDDWKKLFL 77 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~--~~-~~~~~~dl~ml~~-~~g~~rt~~e~~~ll~ 77 (100)
++|.++| ..++|+++++.|+ |||++++. ...+ ..... .. .........-... .....++.++|.++|+
T Consensus 113 ~l~~~~~--~~~~l~~~~~~L~---pgG~l~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 184 (263)
T 2yqz_A 113 LWHLVPD--WPKVLAEAIRVLK---PGGALLEG-WDQA--EASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALR 184 (263)
T ss_dssp CGGGCTT--HHHHHHHHHHHEE---EEEEEEEE-EEEE--CCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHH
T ss_pred chhhcCC--HHHHHHHHHHHCC---CCcEEEEE-ecCC--CccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHH
Confidence 6788876 4789999999999 99999988 2221 11110 00 0111111100000 0234678999999999
Q ss_pred HcCCceeEEE
Q 040309 78 AAGFSHYKIT 87 (100)
Q Consensus 78 ~aGf~~~~v~ 87 (100)
++||+++.+.
T Consensus 185 ~~Gf~~~~~~ 194 (263)
T 2yqz_A 185 RLGLKPRTRE 194 (263)
T ss_dssp HTTCCCEEEE
T ss_pred HcCCCcceEE
Confidence 9999987653
No 85
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.34 E-value=0.00019 Score=47.68 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=45.6
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhh-hhhhhh---hhc-cc---ccCceecCHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESME-TQLCFD---ILM-VS---LFRGKERSVDDWK 73 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~-~~~~~d---l~m-l~---~~~g~~rt~~e~~ 73 (100)
++|.++| ..++|+++++.|+ |||++++...... .. +... ...... ..- +. ......++.++|.
T Consensus 104 ~l~~~~~--~~~~l~~~~~~L~---pgG~l~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (259)
T 2p35_A 104 VFQWVPD--HLAVLSQLMDQLE---SGGVLAVQMPDNL---QE-PTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYF 174 (259)
T ss_dssp CGGGSTT--HHHHHHHHGGGEE---EEEEEEEEEECCT---TS-HHHHHHHHHHHHSTTGGGC-------CCCCCHHHHH
T ss_pred chhhCCC--HHHHHHHHHHhcC---CCeEEEEEeCCCC---Cc-HHHHHHHHHhcCcchHHHhccccccccCCCCHHHHH
Confidence 6777766 4789999999999 9999999874321 11 1100 000100 000 00 1124567999999
Q ss_pred HHHHHcCCcee
Q 040309 74 KLFLAAGFSHY 84 (100)
Q Consensus 74 ~ll~~aGf~~~ 84 (100)
++|+++||++.
T Consensus 175 ~~l~~aGf~v~ 185 (259)
T 2p35_A 175 NALSPKSSRVD 185 (259)
T ss_dssp HHHGGGEEEEE
T ss_pred HHHHhcCCceE
Confidence 99999999743
No 86
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.30 E-value=0.00083 Score=43.02 Aligned_cols=68 Identities=10% Similarity=0.023 Sum_probs=48.7
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCce
Q 040309 4 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSH 83 (100)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~ 83 (100)
+.++.++..++|+++++.|+ |||++++.+....... .. ... .......+|.++++++|+ ||++
T Consensus 103 ~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~~~~~~~-------~~--~~~---~~~~~~~~~~~~l~~~l~--Gf~v 165 (202)
T 2kw5_A 103 CHLPSSLRQQLYPKVYQGLK---PGGVFILEGFAPEQLQ-------YN--TGG---PKDLDLLPKLETLQSELP--SLNW 165 (202)
T ss_dssp CCCCHHHHHHHHHHHHTTCC---SSEEEEEEEECTTTGG-------GT--SCC---SSSGGGCCCHHHHHHHCS--SSCE
T ss_pred hcCCHHHHHHHHHHHHHhcC---CCcEEEEEEecccccc-------CC--CCC---CCcceeecCHHHHHHHhc--CceE
Confidence 45577889999999999999 9999999887543211 00 000 001235689999999999 9999
Q ss_pred eEEEe
Q 040309 84 YKITP 88 (100)
Q Consensus 84 ~~v~~ 88 (100)
+++..
T Consensus 166 ~~~~~ 170 (202)
T 2kw5_A 166 LIANN 170 (202)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98753
No 87
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.18 E-value=5.6e-05 Score=51.95 Aligned_cols=75 Identities=13% Similarity=0.327 Sum_probs=45.8
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHH--cCCc
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLA--AGFS 82 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~--aGf~ 82 (100)
+|+++...++|+++++.|+ |||+|++-...... +.+...... .+...........++|..+|.+ +||+
T Consensus 193 ~~~~~~~~~~l~~~~~~Lk---pGG~lil~~~~~~~------y~~~~~~~~-~~~~~~~~~~~~p~~~~~~L~~~~~GF~ 262 (292)
T 3g07_A 193 NWGDEGLKRMFRRIYRHLR---PGGILVLEPQPWSS------YGKRKTLTE-TIYKNYYRIQLKPEQFSSYLTSPDVGFS 262 (292)
T ss_dssp HHHHHHHHHHHHHHHHHEE---EEEEEEEECCCHHH------HHTTTTSCH-HHHHHHHHCCCCGGGHHHHHTSTTTCCC
T ss_pred cCCHHHHHHHHHHHHHHhC---CCcEEEEecCCchh------hhhhhcccH-HHHhhhhcEEEcHHHHHHHHHhcCCCce
Confidence 5689999999999999999 99998874321110 000000000 0000111223347899999999 9999
Q ss_pred eeEEEec
Q 040309 83 HYKITPI 89 (100)
Q Consensus 83 ~~~v~~~ 89 (100)
.++++..
T Consensus 263 ~~~~~~~ 269 (292)
T 3g07_A 263 SYELVAT 269 (292)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 8887654
No 88
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.83 E-value=0.0035 Score=42.13 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=46.3
Q ss_pred ChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEE
Q 040309 7 NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
..+....+++++++.|+ |||++++.+...+ +.+++.++++++||+++++
T Consensus 193 ~~~~~~~~l~~~~~~Lk---pgG~lils~~~~~----------------------------~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 193 YAELHAALAPRYREALV---PGGRALLTGILKD----------------------------RAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp CHHHHHHHHHHHHHHEE---EEEEEEEEEEEGG----------------------------GHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHHHcC---CCCEEEEEeeccC----------------------------CHHHHHHHHHHCCCEEEEE
Confidence 34456789999999999 8999998764321 3679999999999999998
Q ss_pred EecCCcceEE
Q 040309 87 TPILGVRSLI 96 (100)
Q Consensus 87 ~~~~~~~~vi 96 (100)
....++.+++
T Consensus 242 ~~~~~W~~l~ 251 (254)
T 2nxc_A 242 AAEGEWVLLA 251 (254)
T ss_dssp EEETTEEEEE
T ss_pred eccCCeEEEE
Confidence 8877665554
No 89
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=96.82 E-value=0.0016 Score=44.00 Aligned_cols=68 Identities=10% Similarity=0.150 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
+...++++++++|+ |||+++|.......+...++ ....++-.+.|+++||++.+...+
T Consensus 160 ~~~~~l~~~~r~LK---pGG~lvI~ik~r~~d~~~p~-------------------~~~~~~ev~~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 160 QAAIVVRNARFFLR---DGGYMLMAIKARSIDVTTEP-------------------SEVYKREIKTLMDGGLEIKDVVHL 217 (233)
T ss_dssp HHHHHHHHHHHHEE---EEEEEEEEEECCHHHHHTCC-------------------CHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred hHHHHHHHHHHhcc---CCCEEEEEEecccCCCCCCh-------------------HHHHHHHHHHHHHCCCEEEEEEcc
Confidence 45788999999999 99999987532211111100 001234456789999999998877
Q ss_pred CCc---ceEEEEe
Q 040309 90 LGV---RSLIEAY 99 (100)
Q Consensus 90 ~~~---~~vie~~ 99 (100)
..+ +.++.++
T Consensus 218 ~pf~~~H~lv~~~ 230 (233)
T 4df3_A 218 DPFDRDHAMIYAV 230 (233)
T ss_dssp TTTSTTEEEEEEC
T ss_pred CCCCCceEEEEEE
Confidence 542 4555543
No 90
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.82 E-value=0.0017 Score=42.94 Aligned_cols=30 Identities=30% Similarity=0.459 Sum_probs=25.2
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEE
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.+|.+++++..++|+++++.|+ |||++++-
T Consensus 115 ~~~~~~~~~~~~~l~~~~~~L~---pgG~li~~ 144 (252)
T 1wzn_A 115 TIMYFDEEDLRKLFSKVAEALK---PGGVFITD 144 (252)
T ss_dssp GGGGSCHHHHHHHHHHHHHHEE---EEEEEEEE
T ss_pred chhcCCHHHHHHHHHHHHHHcC---CCeEEEEe
Confidence 3566778889999999999999 89988753
No 91
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=96.60 E-value=0.0044 Score=41.85 Aligned_cols=66 Identities=9% Similarity=0.011 Sum_probs=47.3
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
+||..++++..++++++++.|+ |||+++++....+...... .....|.+|+.++|+. +|
T Consensus 161 ~l~~l~~~~~~~~l~~~~~~Lk---pGG~l~l~~~~~~~~~~~g-----------------~~~~~~~~el~~~l~~-~f 219 (252)
T 2gb4_A 161 ALVAINPGDHDRYADIILSLLR---KEFQYLVAVLSYDPTKHAG-----------------PPFYVPSAELKRLFGT-KC 219 (252)
T ss_dssp STTTSCGGGHHHHHHHHHHTEE---EEEEEEEEEEECCTTSCCC-----------------SSCCCCHHHHHHHHTT-TE
T ss_pred hhhhCCHHHHHHHHHHHHHHcC---CCeEEEEEEEecCCccCCC-----------------CCCCCCHHHHHHHhhC-Ce
Confidence 5677788888899999999999 9999987665433211100 0112589999999988 59
Q ss_pred ceeEEEe
Q 040309 82 SHYKITP 88 (100)
Q Consensus 82 ~~~~v~~ 88 (100)
++..+..
T Consensus 220 ~v~~~~~ 226 (252)
T 2gb4_A 220 SMQCLEE 226 (252)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9887653
No 92
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=96.50 E-value=0.0034 Score=43.50 Aligned_cols=84 Identities=17% Similarity=0.241 Sum_probs=47.8
Q ss_pred cccc-CChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCC---CC---------C---Cchhhhhh-hhhhhhc-cc---
Q 040309 2 ILHN-WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIEN---QS---------Q---DKESMETQ-LCFDILM-VS--- 60 (100)
Q Consensus 2 vlHd-w~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~---~~---------~---~~~~~~~~-~~~dl~m-l~--- 60 (100)
++|. |++++..++|++++++|+ |||++++...-.+. -- . ..++.... .-.+... +.
T Consensus 138 ~lhy~~~~~~~~~~l~~~~r~Lk---pGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (302)
T 2vdw_A 138 AIHYSFHPRHYATVMNNLSELTA---SGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPST 214 (302)
T ss_dssp CGGGTCSTTTHHHHHHHHHHHEE---EEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTT
T ss_pred hHHHhCCHHHHHHHHHHHHHHcC---CCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccccceeeccc
Confidence 4554 565566899999999999 99999876642110 00 0 00000000 0000000 00
Q ss_pred -ccC--ceecCHHHHHHHHHHcCCceeEEEe
Q 040309 61 -LFR--GKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 61 -~~~--g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
... -.-.+.+++.++++++||+++....
T Consensus 215 ~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 215 MSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp BSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 011 1246789999999999999988754
No 93
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=96.50 E-value=0.0019 Score=41.59 Aligned_cols=68 Identities=12% Similarity=0.101 Sum_probs=42.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhh-hhhcccccCceecCHHHHHHHHHHc
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF-DILMVSLFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~-dl~ml~~~~g~~rt~~e~~~ll~~a 79 (100)
+++|+++| ..++|+++++.|+ |||++++.+..... +........ ..........+.+|.++++++|+
T Consensus 103 ~~l~~~~~--~~~~l~~~~~~L~---pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~-- 170 (211)
T 2gs9_A 103 TTLEFVED--VERVLLEARRVLR---PGGALVVGVLEALS-----PWAALYRRLGEKGVLPWAQARFLAREDLKALLG-- 170 (211)
T ss_dssp SCTTTCSC--HHHHHHHHHHHEE---EEEEEEEEEECTTS-----HHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--
T ss_pred ChhhhcCC--HHHHHHHHHHHcC---CCCEEEEEecCCcC-----cHHHHHHHHhhccCccccccccCCHHHHHHHhc--
Confidence 36778875 4689999999999 99999998754321 111110000 00000112356689999999999
Q ss_pred C
Q 040309 80 G 80 (100)
Q Consensus 80 G 80 (100)
|
T Consensus 171 G 171 (211)
T 2gs9_A 171 P 171 (211)
T ss_dssp S
T ss_pred C
Confidence 7
No 94
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.29 E-value=0.005 Score=41.55 Aligned_cols=66 Identities=15% Similarity=0.181 Sum_probs=48.2
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|.+++++..++|+++++.|+ |||+++++.....+....+ .......+.++++++++. |
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~---------------~~~~~~~~~~~l~~~~~~--~ 252 (286)
T 3m70_A 193 VFMFLNRERVPSIIKNMKEHTN---VGGYNLIVAAMSTDDVPCP---------------LPFSFTFAENELKEYYKD--W 252 (286)
T ss_dssp SGGGSCGGGHHHHHHHHHHTEE---EEEEEEEEEEBCCSSSCCS---------------SCCSCCBCTTHHHHHTTT--S
T ss_pred chhhCCHHHHHHHHHHHHHhcC---CCcEEEEEEecCCCCCCCC---------------CCccccCCHHHHHHHhcC--C
Confidence 6888999999999999999999 9999888776654322110 011245577888888854 8
Q ss_pred ceeEEE
Q 040309 82 SHYKIT 87 (100)
Q Consensus 82 ~~~~v~ 87 (100)
+++...
T Consensus 253 ~~~~~~ 258 (286)
T 3m70_A 253 EFLEYN 258 (286)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887764
No 95
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.07 E-value=0.0019 Score=43.20 Aligned_cols=66 Identities=14% Similarity=0.041 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhh-hcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDI-LMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl-~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
.++|+++++.|+ |||++++.- .|..... ....+- -.+.......++.+++.++++++||++..+..
T Consensus 117 ~~~l~~i~rvLk---pgG~lv~~~--~p~~e~~------~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 117 DLILPPLYEILE---KNGEVAALI--KPQFEAG------REQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp GGTHHHHHHHSC---TTCEEEEEE--CHHHHSC------HHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHhcc---CCCEEEEEE--CcccccC------HHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 578999999999 999999942 1110000 000000 00000112334889999999999999998864
No 96
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=95.97 E-value=0.004 Score=41.28 Aligned_cols=67 Identities=9% Similarity=0.110 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceec-CHHHHHHHHHHcCCceeEEEecC
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKER-SVDDWKKLFLAAGFSHYKITPIL 90 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~r-t~~e~~~ll~~aGf~~~~v~~~~ 90 (100)
..+|+++++.|+ |||++++...+.+. ....++ ...+.- .....+ ..+|+.++++++||++..+....
T Consensus 119 ~~~l~~~~r~Lk---pGG~l~i~~~~~~~-~~~~~~----~~~~~~----~~~~~~~~~~el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 119 RDILSNVADLAK---KEAHFEFVTTYSDS-YEEAEI----KKRGLP----LLSKAYFLSEQYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp HHHHHHHHTTEE---EEEEEEEEECCCC-----------------------CCHHHHHSHHHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHHhcC---CCcEEEEEEecccc-chhchh----hhcCCC----CCChhhcchHHHHHHHHHcCCCeeeeeecC
Confidence 468999999999 99999995443332 111010 000100 001111 22369999999999998876543
No 97
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=95.85 E-value=0.0064 Score=39.35 Aligned_cols=65 Identities=6% Similarity=-0.041 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
.++|+++++.|+ |||++++.-....-.... + ...++ ......+..+++..+++++||++.++...
T Consensus 120 ~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~-~-----~~~~~----~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 120 PEMLRGMAAVCR---PGASFLVALNLHAWRPSV-P-----EVGEH----PEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp SHHHHHHHHTEE---EEEEEEEEEEGGGBTTBC-G-----GGTTC----CCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHHHHHcC---CCcEEEEEeccccccccc-c-----ccccC----CccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 688999999999 999999843221111110 0 00011 01123334566899999999999988654
No 98
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=95.84 E-value=0.031 Score=37.64 Aligned_cols=59 Identities=12% Similarity=0.248 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
+...++++++.+.|+ |||++++.. . ..+.+++.++++++||+.+++.+
T Consensus 215 ~~~~~~l~~~~~~Lk---pgG~l~~~~--------~---------------------~~~~~~~~~~l~~~Gf~~v~~~~ 262 (276)
T 2b3t_A 215 ADIVHIIEQSRNALV---SGGFLLLEH--------G---------------------WQQGEAVRQAFILAGYHDVETCR 262 (276)
T ss_dssp HHHHHHHHHHGGGEE---EEEEEEEEC--------C---------------------SSCHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHHHHHhcC---CCCEEEEEE--------C---------------------chHHHHHHHHHHHCCCcEEEEEe
Confidence 456889999999999 899988751 0 11467899999999999888765
Q ss_pred -cCCcceEEEEe
Q 040309 89 -ILGVRSLIEAY 99 (100)
Q Consensus 89 -~~~~~~vie~~ 99 (100)
..+...++.++
T Consensus 263 d~~g~~r~~~~~ 274 (276)
T 2b3t_A 263 DYGDNERVTLGR 274 (276)
T ss_dssp CTTSSEEEEEEE
T ss_pred cCCCCCcEEEEE
Confidence 44555555543
No 99
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.80 E-value=0.019 Score=36.73 Aligned_cols=46 Identities=4% Similarity=0.215 Sum_probs=34.8
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
+....+..++++++.+.|+ |||++++...... +.+++.++++++||
T Consensus 115 ~~~~~~~~~~l~~~~~~Lk---pgG~l~~~~~~~~----------------------------~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 115 GGSGGMLEEIIDAVDRRLK---SEGVIVLNAVTLD----------------------------TLTKAVEFLEDHGY 160 (204)
T ss_dssp SCCTTCHHHHHHHHHHHCC---TTCEEEEEECBHH----------------------------HHHHHHHHHHHTTC
T ss_pred CCCCcCHHHHHHHHHHhcC---CCeEEEEEecccc----------------------------cHHHHHHHHHHCCC
Confidence 3333456789999999999 9999998653211 45678889999998
No 100
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=95.62 E-value=0.013 Score=38.48 Aligned_cols=68 Identities=7% Similarity=0.134 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCC-CCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEE
Q 040309 8 DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIEN-QSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 8 d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~-~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
.++...+++++++.|+ |||++++ +..... ....++ ... -.++ .++|+++||+++++
T Consensus 158 ~~~~~~~~~~~~~~Lk---pgG~l~i-~~~~~~~~~~~~~----~~~--------------~~~~-~~~l~~~Gf~~~~~ 214 (233)
T 2ipx_A 158 PDQTRIVALNAHTFLR---NGGHFVI-SIKANCIDSTASA----EAV--------------FASE-VKKMQQENMKPQEQ 214 (233)
T ss_dssp TTHHHHHHHHHHHHEE---EEEEEEE-EEEHHHHCSSSCH----HHH--------------HHHH-HHTTGGGTEEEEEE
T ss_pred ccHHHHHHHHHHHHcC---CCeEEEE-EEcccccccCCCH----HHH--------------HHHH-HHHHHHCCCceEEE
Confidence 3455778999999999 9999998 432210 111100 000 1123 68899999999997
Q ss_pred EecCCc---ceEEEE
Q 040309 87 TPILGV---RSLIEA 98 (100)
Q Consensus 87 ~~~~~~---~~vie~ 98 (100)
.....+ +.++.+
T Consensus 215 ~~~~~~~~~~~~v~~ 229 (233)
T 2ipx_A 215 LTLEPYERDHAVVVG 229 (233)
T ss_dssp EECTTTSSSEEEEEE
T ss_pred EecCCccCCcEEEEE
Confidence 776432 444444
No 101
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=95.56 E-value=0.057 Score=35.04 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=44.5
Q ss_pred cccCCh-HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCC
Q 040309 3 LHNWND-EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGF 81 (100)
Q Consensus 3 lHdw~d-~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf 81 (100)
++|.+. +....+++++++.|+ |||++++. .-........+. ...+.+++..+ +++ |
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~Lk---pgG~l~~~-~~~~~~~~~~~~-----------------~~~~~~~l~~l-~~~-f 204 (227)
T 1g8a_A 148 FEDVAQPTQAKILIDNAEVYLK---RGGYGMIA-VKSRSIDVTKEP-----------------EQVFREVEREL-SEY-F 204 (227)
T ss_dssp EECCCSTTHHHHHHHHHHHHEE---EEEEEEEE-EEGGGTCTTSCH-----------------HHHHHHHHHHH-HTT-S
T ss_pred EECCCCHhHHHHHHHHHHHhcC---CCCEEEEE-EecCCCCCCCCh-----------------hhhhHHHHHHH-Hhh-c
Confidence 344433 334455999999999 99999998 322211111100 12236678887 777 9
Q ss_pred ceeEEEecCCc---ceEEEEe
Q 040309 82 SHYKITPILGV---RSLIEAY 99 (100)
Q Consensus 82 ~~~~v~~~~~~---~~vie~~ 99 (100)
++++...+... +.++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~ 225 (227)
T 1g8a_A 205 EVIERLNLEPYEKDHALFVVR 225 (227)
T ss_dssp EEEEEEECTTTSSSEEEEEEE
T ss_pred eeeeEeccCcccCCCEEEEEE
Confidence 99998877543 4455443
No 102
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=95.31 E-value=0.0033 Score=41.45 Aligned_cols=64 Identities=13% Similarity=0.109 Sum_probs=40.3
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCc
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFS 82 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~ 82 (100)
.|++..+.-..+|+++++.|+ |||++++++..... ....+. .........+++...+.++||+
T Consensus 141 ~~~~~~~~~~~~l~~~~r~Lk---pgG~l~~~~~~~~~----------~~~~~~----~~~~~~~~~~~~~~~l~~aGF~ 203 (236)
T 1zx0_A 141 EETWHTHQFNFIKNHAFRLLK---PGGVLTYCNLTSWG----------ELMKSK----YSDITIMFEETQVPALLEAGFR 203 (236)
T ss_dssp GGGTTTHHHHHHHHTHHHHEE---EEEEEEECCHHHHH----------HHTTTT----CSCHHHHHHHHTHHHHHHTTCC
T ss_pred hhhhhhhhHHHHHHHHHHhcC---CCeEEEEEecCcHH----------Hhhchh----hhhhhhhccHHHHHHHHHCCCC
Confidence 456666666789999999999 99999988754210 000000 0111222345667789999999
Q ss_pred e
Q 040309 83 H 83 (100)
Q Consensus 83 ~ 83 (100)
.
T Consensus 204 ~ 204 (236)
T 1zx0_A 204 R 204 (236)
T ss_dssp G
T ss_pred C
Confidence 5
No 103
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=95.12 E-value=0.012 Score=40.06 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=41.2
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhccc-ccCcee--cCHHHHHHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVS-LFRGKE--RSVDDWKKLFLA 78 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~-~~~g~~--rt~~e~~~ll~~ 78 (100)
++|.+ +..++|+++++.|+ |||++++.+...+.....+.. ......+..-. ..+... ...+.+++++++
T Consensus 122 ~l~~~---~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~ 193 (299)
T 3g5t_A 122 CAHWF---DFEKFQRSAYANLR---KDGTIAIWGYADPIFPDYPEF--DDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKD 193 (299)
T ss_dssp CGGGS---CHHHHHHHHHHHEE---EEEEEEEEEEEEEECTTCGGG--TTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTT
T ss_pred HHHHh---CHHHHHHHHHHhcC---CCcEEEEEecCCccccCcHHH--HHHHHHhccCcccccchhhchhhHHHHHhhhc
Confidence 57777 45799999999999 999999966543321111111 01111111000 011111 345567999999
Q ss_pred cCCc
Q 040309 79 AGFS 82 (100)
Q Consensus 79 aGf~ 82 (100)
+||.
T Consensus 194 ~gfp 197 (299)
T 3g5t_A 194 SHLD 197 (299)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9993
No 104
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=95.03 E-value=0.011 Score=41.14 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhh-cccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDIL-MVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~-ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
.++|+.+++.|+ |||++++. +.|.-.... ...+-. ......-..++.+++.++++++||++..+..
T Consensus 165 ~~vL~e~~rvLk---pGG~lv~l--vkPqfe~~~------~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 165 NLILPALAKILV---DGGQVVAL--VKPQFEAGR------EQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp GGTHHHHHHHSC---TTCEEEEE--ECGGGTSCG------GGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHcC---cCCEEEEE--ECcccccCh------hhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 678999999999 99999996 222211110 001100 0000012345888999999999999988764
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=94.97 E-value=0.035 Score=37.95 Aligned_cols=85 Identities=13% Similarity=-0.019 Sum_probs=48.8
Q ss_pred ccccC--ChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCC-------CCCC---chhhh--hhhhhhh---------hc
Q 040309 2 ILHNW--NDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIEN-------QSQD---KESME--TQLCFDI---------LM 58 (100)
Q Consensus 2 vlHdw--~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~-------~~~~---~~~~~--~~~~~dl---------~m 58 (100)
++|.. +.++..++|++++++|+ |||.+++...-.+. .... .+... +...-++ .+
T Consensus 123 ~l~~~~~~~~~~~~~l~~~~~~Lk---pgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l 199 (313)
T 3bgv_A 123 VCHYSFESYEQADMMLRNACERLS---PGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNL 199 (313)
T ss_dssp CGGGGGGSHHHHHHHHHHHHTTEE---EEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEE
T ss_pred chhhccCCHHHHHHHHHHHHHHhC---CCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEE
Confidence 45554 44667899999999999 99999987653210 0000 00000 0000000 00
Q ss_pred --ccccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 59 --VSLFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 59 --l~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
-+.......+.+++.++++++||+++.....
T Consensus 200 ~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 200 EGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp C---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred CCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 0011123468899999999999999987653
No 106
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=94.60 E-value=0.0055 Score=40.68 Aligned_cols=62 Identities=11% Similarity=0.048 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEE
Q 040309 8 DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 8 d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
-.+..++++++++.|+ |||+++.++......... ... ..-.....+.+...|.+|||+...+
T Consensus 146 ~~~~~~~~~e~~rvLk---PGG~l~f~~~~~~~~~~~-------~~~-------~~~~~~~~~~~~~~L~eaGF~~~~i 207 (236)
T 3orh_A 146 THQFNFIKNHAFRLLK---PGGVLTYCNLTSWGELMK-------SKY-------SDITIMFEETQVPALLEAGFRRENI 207 (236)
T ss_dssp THHHHHHHHTHHHHEE---EEEEEEECCHHHHHHHTT-------TTC-------SCHHHHHHHHTHHHHHHHTCCGGGE
T ss_pred hcchhhhhhhhhheeC---CCCEEEEEecCCchhhhh-------hhh-------hhhhhhhHHHHHHHHHHcCCeEEEE
Confidence 3446789999999999 999998765332110000 000 0111123456778889999997654
No 107
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.33 E-value=0.029 Score=36.02 Aligned_cols=33 Identities=12% Similarity=0.247 Sum_probs=27.9
Q ss_pred CccccCCh-HHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 1 GILHNWND-EESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 1 ~vlHdw~d-~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
+++|+++| ++..++|+++++.|+ |||.+++...
T Consensus 122 ~~l~~~~~~~~~~~~l~~~~~~L~---pgG~l~~~~~ 155 (216)
T 3ofk_A 122 EVLYYLEDMTQMRTAIDNMVKMLA---PGGHLVFGSA 155 (216)
T ss_dssp SCGGGSSSHHHHHHHHHHHHHTEE---EEEEEEEEEE
T ss_pred cHHHhCCCHHHHHHHHHHHHHHcC---CCCEEEEEec
Confidence 46888886 667799999999999 9999998764
No 108
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=93.98 E-value=0.024 Score=38.87 Aligned_cols=30 Identities=7% Similarity=0.267 Sum_probs=27.8
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEE
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVII 33 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli 33 (100)
|||+.++++...+++++++++|+ |||.|++
T Consensus 221 nvliyf~~~~~~~vl~~~~~~L~---pgG~L~l 250 (274)
T 1af7_A 221 NVMIYFDKTTQEDILRRFVPLLK---PDGLLFA 250 (274)
T ss_dssp SSGGGSCHHHHHHHHHHHGGGEE---EEEEEEE
T ss_pred CchHhCCHHHHHHHHHHHHHHhC---CCcEEEE
Confidence 68999999999999999999999 9999887
No 109
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=93.79 E-value=0.13 Score=34.35 Aligned_cols=75 Identities=7% Similarity=0.082 Sum_probs=40.9
Q ss_pred ccccCChHHHHH-HHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC
Q 040309 2 ILHNWNDEESVK-LLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 2 vlHdw~d~~~~~-iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG 80 (100)
|+.|-+..+-.+ +++++++.|+ |||++++.-.....+.+.+ .+-..++-...|+++|
T Consensus 150 I~~d~a~~~~~~il~~~~~~~Lk---pGG~lvisik~~~~d~t~~-------------------~~e~~~~~~~~L~~~g 207 (232)
T 3id6_C 150 LYVDIAQPDQTDIAIYNAKFFLK---VNGDMLLVIKARSIDVTKD-------------------PKEIYKTEVEKLENSN 207 (232)
T ss_dssp EEECCCCTTHHHHHHHHHHHHEE---EEEEEEEEEC-------CC-------------------SSSSTTHHHHHHHHTT
T ss_pred EEecCCChhHHHHHHHHHHHhCC---CCeEEEEEEccCCcccCCC-------------------HHHHHHHHHHHHHHCC
Confidence 344544433344 4556666999 9999999732111000100 1111234556778899
Q ss_pred CceeEEEecCCc---ceEEEE
Q 040309 81 FSHYKITPILGV---RSLIEA 98 (100)
Q Consensus 81 f~~~~v~~~~~~---~~vie~ 98 (100)
|++.++..+..+ +.++.+
T Consensus 208 f~~~~~~~l~p~~~~h~~v~~ 228 (232)
T 3id6_C 208 FETIQIINLDPYDKDHAIVLS 228 (232)
T ss_dssp EEEEEEEECTTTCSSCEEEEE
T ss_pred CEEEEEeccCCCcCceEEEEE
Confidence 999999877433 555544
No 110
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=93.75 E-value=0.014 Score=38.21 Aligned_cols=21 Identities=14% Similarity=0.139 Sum_probs=16.7
Q ss_pred CHHHHHHHHHHcCCceeEEEe
Q 040309 68 SVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~ 88 (100)
+.+++.++++++||+..++..
T Consensus 146 ~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 146 NVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp CCTHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHCCCeEEEEEe
Confidence 566888999999998887653
No 111
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=93.75 E-value=0.15 Score=35.06 Aligned_cols=51 Identities=8% Similarity=0.108 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
.+++++++++|+ |||++++... . +. . ...+.+++.+.++++||..++++..
T Consensus 190 ~~~l~~~~~~Lk---pgG~lv~~~~------~--~~------~----------~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 190 EAFYKDVLRILK---PDGICCNQGE------S--IW------L----------DLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEEC------C--TT------T----------CHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhcC---CCcEEEEecC------C--cc------c----------chHHHHHHHHHHHhCCCCcEEEEEe
Confidence 588999999999 8999988631 0 10 0 1225678999999999999888653
No 112
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=93.48 E-value=0.34 Score=34.18 Aligned_cols=78 Identities=15% Similarity=0.167 Sum_probs=51.4
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhh-hhhcc--cccC-ceecCHHHHHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF-DILMV--SLFR-GKERSVDDWKKLFL 77 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~-dl~ml--~~~~-g~~rt~~e~~~ll~ 77 (100)
+|.-.+.+++.++|+.+.+..+ +|.+++.|.+.+++ ++.+ .+. .+.-. -+.+ -...|.++..++|.
T Consensus 200 vL~YL~~~~~~~ll~~ia~~f~----~~~~i~yE~i~p~d----~fg~--~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~ 269 (334)
T 3iei_A 200 VLVYMTPEQSANLLKWAANSFE----RAMFINYEQVNMGD----RFGQ--IMIENLRRRQCDLAGVETCKSLESQKERLL 269 (334)
T ss_dssp CGGGSCHHHHHHHHHHHHHHCS----SEEEEEEEECCTTS----HHHH--HHHHHHHTTTCCCTTGGGGGCHHHHHHHHH
T ss_pred hhhCCCHHHHHHHHHHHHHhCC----CceEEEEeccCCCC----HHHH--HHHHHHHHhCCCCcccccCCCHHHHHHHHH
Confidence 5667889999999999998776 56777889985532 2211 111 11100 0111 13458899999999
Q ss_pred HcCCceeEEEec
Q 040309 78 AAGFSHYKITPI 89 (100)
Q Consensus 78 ~aGf~~~~v~~~ 89 (100)
++||+.+++...
T Consensus 270 ~~Gw~~~~~~d~ 281 (334)
T 3iei_A 270 SNGWETASAVDM 281 (334)
T ss_dssp TTTCSEEEEEEH
T ss_pred HcCCCcceeecH
Confidence 999999877654
No 113
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=93.48 E-value=0.22 Score=35.04 Aligned_cols=75 Identities=16% Similarity=0.076 Sum_probs=49.2
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhc---ccccC-ceecCHHHHHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILM---VSLFR-GKERSVDDWKKLFL 77 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~m---l~~~~-g~~rt~~e~~~ll~ 77 (100)
+|+-.+.+++.++|+.+.+..+ +|.+++.|.+.+..... ++.+. ....+.- ....+ ....|.++..+.|.
T Consensus 203 vL~YL~~~~~~~ll~~ia~~~~----~~~~v~~e~i~~~~~~~-~fg~~-m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~ 276 (334)
T 1rjd_A 203 LLCYMHNNESQLLINTIMSKFS----HGLWISYDPIGGSQPND-RFGAI-MQSNLKESRNLEMPTLMTYNSKEKYASRWS 276 (334)
T ss_dssp CGGGSCHHHHHHHHHHHHHHCS----SEEEEEEEECCCCSTTC-CHHHH-HHHHHHHHHCCCCTTTTTTCSHHHHHGGGT
T ss_pred hhhCCCHHHHHHHHHHHHhhCC----CcEEEEEeccCCCCCcc-hHHHH-HHHHhhcccCCcccccccCCCHHHHHHHHH
Confidence 6788899999999999998765 78888999987733222 22110 0001110 01111 24468999999999
Q ss_pred HcCCc
Q 040309 78 AAGFS 82 (100)
Q Consensus 78 ~aGf~ 82 (100)
++||+
T Consensus 277 ~~Gf~ 281 (334)
T 1rjd_A 277 AAPNV 281 (334)
T ss_dssp TSSEE
T ss_pred HCCCC
Confidence 99997
No 114
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=93.36 E-value=0.11 Score=32.77 Aligned_cols=48 Identities=10% Similarity=0.113 Sum_probs=35.9
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHH--HcCCceeEEEec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFL--AAGFSHYKITPI 89 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~--~aGf~~~~v~~~ 89 (100)
.++++++++.|+ |||++++++... ...+++.++++ ++||..+++.+.
T Consensus 144 ~~~l~~~~~~Lk---pgG~l~~~~~~~----------------------------~~~~~~~~~l~~~~~gf~~~~~~~~ 192 (215)
T 4dzr_A 144 RRMAALPPYVLA---RGRAGVFLEVGH----------------------------NQADEVARLFAPWRERGFRVRKVKD 192 (215)
T ss_dssp HHHHTCCGGGBC---SSSEEEEEECTT----------------------------SCHHHHHHHTGGGGGGTEECCEEEC
T ss_pred HHHHHHHHHHhc---CCCeEEEEEECC----------------------------ccHHHHHHHHHHhhcCCceEEEEEe
Confidence 789999999999 999977765421 12456778888 889988887765
Q ss_pred C
Q 040309 90 L 90 (100)
Q Consensus 90 ~ 90 (100)
.
T Consensus 193 ~ 193 (215)
T 4dzr_A 193 L 193 (215)
T ss_dssp T
T ss_pred c
Confidence 3
No 115
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=93.00 E-value=0.0017 Score=43.25 Aligned_cols=67 Identities=21% Similarity=0.198 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
..+++++++.|+ |||++.+++.++... ........++....+...+.+++.++++++||+.+++...
T Consensus 172 ~~l~~~~~~~Lk---pgG~l~~~~~~~~~~--------~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 172 SVNTGGITEIMA---EGGELEFVKRIIHDS--------LQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp -----CTTTTHH---HHTHHHHHHHHHHHH--------HHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred HHHhhhHHHHEe---cCCEEEEEHHHHHHH--------HhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 356788888999 899998887654320 1111111122222355666789999999999999887655
No 116
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=92.90 E-value=0.25 Score=31.82 Aligned_cols=51 Identities=31% Similarity=0.367 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEecC
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPIL 90 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~ 90 (100)
..++++++.+.|+ |||++++.-.. +..+.+++.++++++||++..+....
T Consensus 158 ~~~~l~~~~~~Lk---pgG~l~~~~~~---------------------------~~~~~~~~~~~l~~~g~~~~~~~~~~ 207 (230)
T 3evz_A 158 SVKLLEEAFDHLN---PGGKVALYLPD---------------------------KEKLLNVIKERGIKLGYSVKDIKFKV 207 (230)
T ss_dssp HHHHHHHHGGGEE---EEEEEEEEEES---------------------------CHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred HHHHHHHHHHHhC---CCeEEEEEecc---------------------------cHhHHHHHHHHHHHcCCceEEEEecC
Confidence 4789999999999 99999986211 00135788999999999887775544
Q ss_pred C
Q 040309 91 G 91 (100)
Q Consensus 91 ~ 91 (100)
+
T Consensus 208 g 208 (230)
T 3evz_A 208 G 208 (230)
T ss_dssp C
T ss_pred C
Confidence 4
No 117
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=92.60 E-value=0.4 Score=34.32 Aligned_cols=75 Identities=13% Similarity=0.207 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhh---------hhhhhcc----------cccCceecCHH
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQL---------CFDILMV----------SLFRGKERSVD 70 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~---------~~dl~ml----------~~~~g~~rt~~ 70 (100)
+-..+|+..++.|+ |||++++.=.-.++....+.. .... +.|+..- ....-.-+|.+
T Consensus 203 D~~~fL~~ra~eL~---pGG~mvl~~~gr~~~~~~~~~-~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~ 278 (374)
T 3b5i_A 203 DLAEFLRARAAEVK---RGGAMFLVCLGRTSVDPTDQG-GAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQ 278 (374)
T ss_dssp HHHHHHHHHHHHEE---EEEEEEEEEEECCCSSTTCCH-HHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHH
T ss_pred HHHHHHHHHHHHhC---CCCEEEEEEecCCCCcccccc-chhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHH
Confidence 34557999999999 999998876655432111100 0001 1111100 01123458999
Q ss_pred HHHHHHH-HcCCceeEEEe
Q 040309 71 DWKKLFL-AAGFSHYKITP 88 (100)
Q Consensus 71 e~~~ll~-~aGf~~~~v~~ 88 (100)
|++++++ ++||++.++..
T Consensus 279 E~~~~l~~~~~F~I~~le~ 297 (374)
T 3b5i_A 279 DFKEVVDANGSFAIDKLVV 297 (374)
T ss_dssp HHHHHHHHHCSEEEEEEEE
T ss_pred HHHHHHHhcCCcEEEEEEE
Confidence 9999998 58999988743
No 118
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=92.05 E-value=0.17 Score=31.31 Aligned_cols=62 Identities=13% Similarity=0.232 Sum_probs=42.3
Q ss_pred CChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeE
Q 040309 6 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 6 w~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~ 85 (100)
|+.+...++++++++.|+ |||++++...... . ..++.+++++. |..++
T Consensus 131 ~~~~~~~~~l~~~~~~L~---~gG~l~~~~~~~~----------~------------------~~~~~~~l~~~-~~~~~ 178 (194)
T 1dus_A 131 AGKEVLHRIIEEGKELLK---DNGEIWVVIQTKQ----------G------------------AKSLAKYMKDV-FGNVE 178 (194)
T ss_dssp TCHHHHHHHHHHHHHHEE---EEEEEEEEEESTH----------H------------------HHHHHHHHHHH-HSCCE
T ss_pred cchhHHHHHHHHHHHHcC---CCCEEEEEECCCC----------C------------------hHHHHHHHHHH-hcceE
Confidence 345678899999999999 8999998875321 0 12577777777 66666
Q ss_pred EEecCCcceEEEEe
Q 040309 86 ITPILGVRSLIEAY 99 (100)
Q Consensus 86 v~~~~~~~~vie~~ 99 (100)
+......+.++.++
T Consensus 179 ~~~~~~~~~~~~~~ 192 (194)
T 1dus_A 179 TVTIKGGYRVLKSK 192 (194)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEecCCcEEEEEEe
Confidence 66555555555543
No 119
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=91.80 E-value=0.47 Score=31.43 Aligned_cols=59 Identities=12% Similarity=0.130 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
.....+++.+.+.|+ |||+++++ .+. ....++..++++.||...++.+
T Consensus 153 ~~~~~~l~~~~~~Lk---pgG~l~~~---~~~--------------------------~~~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 153 CTLEDTIRVAASLLK---QGGKANFV---HRP--------------------------ERLLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp HHHHHHHHHHHHHEE---EEEEEEEE---ECT--------------------------TTHHHHHHHHHHTTEEEEEEEE
T ss_pred CCHHHHHHHHHHHcc---CCcEEEEE---EcH--------------------------HHHHHHHHHHHHCCCceEEEEE
Confidence 345689999999999 99999984 211 1245678888899998887755
Q ss_pred cC------CcceEEEEe
Q 040309 89 IL------GVRSLIEAY 99 (100)
Q Consensus 89 ~~------~~~~vie~~ 99 (100)
+. ....++|++
T Consensus 201 v~~~~~~~~~~~l~~~~ 217 (259)
T 3lpm_A 201 VHPRSDREANTVLVEGI 217 (259)
T ss_dssp EESSTTSCCSEEEEEEE
T ss_pred eecCCCCCcEEEEEEEE
Confidence 41 235566654
No 120
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=91.39 E-value=0.14 Score=31.60 Aligned_cols=44 Identities=18% Similarity=0.351 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCcee
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~ 84 (100)
...++|+++.+.|+ |||++++..... .+..++.++++++||.+.
T Consensus 112 ~~~~~l~~~~~~l~---~gG~l~~~~~~~----------------------------~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 112 ELQEILRIIKDKLK---PGGRIIVTAILL----------------------------ETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp CHHHHHHHHHHTEE---EEEEEEEEECBH----------------------------HHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHhcC---CCcEEEEEecCc----------------------------chHHHHHHHHHHCCCceE
Confidence 35788999999999 899988865321 024678889999999443
No 121
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=91.24 E-value=0.38 Score=33.49 Aligned_cols=78 Identities=12% Similarity=0.013 Sum_probs=47.2
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhh-h-hhccc-----c-cCcee-cC-HH
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCF-D-ILMVS-----L-FRGKE-RS-VD 70 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~-d-l~ml~-----~-~~g~~-rt-~~ 70 (100)
.+||-.++++..++|+.+.+.+. ||+. +++|.+.++.... ......+. . +.-.. . .+-.. +| .+
T Consensus 187 gvl~Yl~~~~~~~ll~~l~~~~~---~gs~-l~~d~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 260 (310)
T 2uyo_A 187 GLLMYLPATAQDGLFTEIGGLSA---VGSR-IAVETSPLHGDEW--REQMQLRFRRVSDALGFEQAVDVQELIYHDENRA 260 (310)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTCC---TTCE-EEEECCCTTCSHH--HHHHHHHHHHHHC-----------CCTTCCTTCC
T ss_pred chHhhCCHHHHHHHHHHHHHhCC---CCeE-EEEEecCCCCcch--hHHHHHHHHHHHHHcCCcCCCCccccccCCCChH
Confidence 37899999999999999999887 6665 5667665543100 00011111 1 00000 0 11122 26 78
Q ss_pred HHHHHHHHcCCcee
Q 040309 71 DWKKLFLAAGFSHY 84 (100)
Q Consensus 71 e~~~ll~~aGf~~~ 84 (100)
+..++|.+.||+.+
T Consensus 261 ~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 261 VVADWLNRHGWRAT 274 (310)
T ss_dssp CHHHHHTTTTEEEE
T ss_pred HHHHHHHHCcCccc
Confidence 99999999999988
No 122
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=90.76 E-value=1.4 Score=35.26 Aligned_cols=32 Identities=6% Similarity=0.167 Sum_probs=27.0
Q ss_pred CccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 1 GILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 1 ~vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.++|+++|....++++++++.|+ || .++|...
T Consensus 804 eVLeHL~dp~l~~~L~eI~RvLK---PG-~LIISTP 835 (950)
T 3htx_A 804 EVIEHMEEDQACEFGEKVLSLFH---PK-LLIVSTP 835 (950)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTTC---CS-EEEEEEC
T ss_pred CchhhCChHHHHHHHHHHHHHcC---CC-EEEEEec
Confidence 37899999999999999999999 88 6666543
No 123
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=90.67 E-value=0.081 Score=34.83 Aligned_cols=55 Identities=9% Similarity=0.171 Sum_probs=38.3
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcC-
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAG- 80 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aG- 80 (100)
|+.|+++. .++|+++.++|+ |||++++.....+ ..+++.++++++|
T Consensus 166 v~~~~~~~--~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~~~~~l~~~g~ 212 (255)
T 3mb5_A 166 VILDLPQP--ERVVEHAAKALK---PGGFFVAYTPCSN----------------------------QVMRLHEKLREFKD 212 (255)
T ss_dssp EEECSSCG--GGGHHHHHHHEE---EEEEEEEEESSHH----------------------------HHHHHHHHHHHTGG
T ss_pred EEECCCCH--HHHHHHHHHHcC---CCCEEEEEECCHH----------------------------HHHHHHHHHHHcCC
Confidence 34455554 568999999999 8999988642110 2456788888999
Q ss_pred -CceeEEEec
Q 040309 81 -FSHYKITPI 89 (100)
Q Consensus 81 -f~~~~v~~~ 89 (100)
|..+++...
T Consensus 213 ~f~~~~~~e~ 222 (255)
T 3mb5_A 213 YFMKPRTINV 222 (255)
T ss_dssp GBSCCEEECC
T ss_pred CccccEEEEE
Confidence 888877543
No 124
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=90.65 E-value=1.4 Score=27.29 Aligned_cols=48 Identities=6% Similarity=0.122 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
+..++++++.+.++ ||++++.+... .+.+++.++++++||+...+...
T Consensus 102 ~~~~~~~~~~~~lp----gG~l~~~~~~~----------------------------~~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 102 LGREVIDRFVDAVT----VGMLYLLVIEA----------------------------NRPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp GGCHHHHHHHHHCC----SSEEEEEEEGG----------------------------GCHHHHHHHHHHTTCEEEEEEEE
T ss_pred chHHHHHHHHhhCC----CCEEEEEEecC----------------------------CCHHHHHHHHHHCCCcEEEEEee
Confidence 34667777777763 78887766211 24678999999999999988654
No 125
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=90.44 E-value=0.18 Score=31.79 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
++..++++++.+.|+ |||++++..+..
T Consensus 116 ~~~~~~l~~~~~~Lk---~gG~l~~~~~~~ 142 (197)
T 3eey_A 116 ETTIQALSKAMELLV---TGGIITVVIYYG 142 (197)
T ss_dssp HHHHHHHHHHHHHEE---EEEEEEEEECCB
T ss_pred ccHHHHHHHHHHhCc---CCCEEEEEEccC
Confidence 456779999999999 999999987543
No 126
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=89.45 E-value=0.22 Score=33.59 Aligned_cols=32 Identities=6% Similarity=0.185 Sum_probs=25.3
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
++|..+. .+.++++++.|+ |||+|+++.+..+
T Consensus 108 ~~h~~~~---~~~~~e~~rvLk---pgG~l~~~~~~~~ 139 (257)
T 4hg2_A 108 AMHWFDL---DRFWAELRRVAR---PGAVFAAVTYGLT 139 (257)
T ss_dssp CCTTCCH---HHHHHHHHHHEE---EEEEEEEEEECCC
T ss_pred ehhHhhH---HHHHHHHHHHcC---CCCEEEEEECCCC
Confidence 5665543 468999999999 9999999987554
No 127
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=89.19 E-value=0.9 Score=29.33 Aligned_cols=23 Identities=22% Similarity=0.293 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEE
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~ 34 (100)
++...+|+++++.|+ |||++++.
T Consensus 138 ~~~~~~l~~~~r~Lk---pgG~l~i~ 160 (210)
T 1nt2_A 138 NQIEILKANAEFFLK---EKGEVVIM 160 (210)
T ss_dssp THHHHHHHHHHHHEE---EEEEEEEE
T ss_pred hHHHHHHHHHHHHhC---CCCEEEEE
Confidence 345566999999999 99999998
No 128
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=89.10 E-value=0.63 Score=30.77 Aligned_cols=32 Identities=6% Similarity=0.129 Sum_probs=24.6
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
|.+......+|+++.+.|+ |||.|++.+....
T Consensus 143 d~~~~~~~~~l~~~~~~Lk---pGG~lv~d~~~~~ 174 (242)
T 3r3h_A 143 DADKTNYLNYYELALKLVT---PKGLIAIDNIFWD 174 (242)
T ss_dssp ESCGGGHHHHHHHHHHHEE---EEEEEEEECSSSS
T ss_pred cCChHHhHHHHHHHHHhcC---CCeEEEEECCccC
Confidence 4445556789999999999 8998888776543
No 129
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=89.09 E-value=0.14 Score=33.55 Aligned_cols=53 Identities=15% Similarity=0.062 Sum_probs=36.0
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCc
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFS 82 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~ 82 (100)
+.|+++. .++|+++.++|+ |||++++.+...+ ..++..+.++++||+
T Consensus 171 ~~~~~~~--~~~l~~~~~~L~---~gG~l~~~~~~~~----------------------------~~~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 171 ALDLMEP--WKVLEKAALALK---PDRFLVAYLPNIT----------------------------QVLELVRAAEAHPFR 217 (258)
T ss_dssp EEESSCG--GGGHHHHHHHEE---EEEEEEEEESCHH----------------------------HHHHHHHHHTTTTEE
T ss_pred EECCcCH--HHHHHHHHHhCC---CCCEEEEEeCCHH----------------------------HHHHHHHHHHHCCCc
Confidence 3345543 478999999999 8999998772110 124666677788888
Q ss_pred eeEEEe
Q 040309 83 HYKITP 88 (100)
Q Consensus 83 ~~~v~~ 88 (100)
.+++..
T Consensus 218 ~~~~~~ 223 (258)
T 2pwy_A 218 LERVLE 223 (258)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 776654
No 130
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=88.73 E-value=0.48 Score=30.89 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=25.7
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
+-++..+...++++++.+.|+ |||++++.+...
T Consensus 152 ~~~~~~~~~~~~l~~~~~~L~---pgG~lv~~~~~~ 184 (239)
T 2hnk_A 152 FLDADKENYPNYYPLILKLLK---PGGLLIADNVLW 184 (239)
T ss_dssp EECSCGGGHHHHHHHHHHHEE---EEEEEEEECSSG
T ss_pred EEeCCHHHHHHHHHHHHHHcC---CCeEEEEEcccc
Confidence 345556667799999999999 899998866443
No 131
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=88.53 E-value=1.5 Score=31.48 Aligned_cols=73 Identities=12% Similarity=0.172 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCC-CCchh-hhhhhhhhhhcc----------cccCceecCHHHHHHHHHHc
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQS-QDKES-METQLCFDILMV----------SLFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~-~~~~~-~~~~~~~dl~ml----------~~~~g~~rt~~e~~~ll~~a 79 (100)
..+|+..++.|+ |||++++.=.-.++.. .+... .-...+.|+.-- ....-.-+|.+|++.+++++
T Consensus 205 ~~FL~~Ra~eL~---pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~ 281 (384)
T 2efj_A 205 TTFLRIHSEELI---SRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEE 281 (384)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc---cCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHc
Confidence 345899999999 8999887765444320 11100 001112221100 01123457999999999998
Q ss_pred C-CceeEEE
Q 040309 80 G-FSHYKIT 87 (100)
Q Consensus 80 G-f~~~~v~ 87 (100)
| |++.++.
T Consensus 282 g~F~i~~le 290 (384)
T 2efj_A 282 GSFEILYLE 290 (384)
T ss_dssp CSEEEEEEE
T ss_pred CCceEEEEE
Confidence 5 8888764
No 132
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=87.97 E-value=0.51 Score=30.23 Aligned_cols=33 Identities=6% Similarity=0.017 Sum_probs=25.1
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
+.|.+......+++++.+.|+ |||.+++.+...
T Consensus 138 ~~d~~~~~~~~~l~~~~~~L~---pgG~lv~~~~~~ 170 (223)
T 3duw_A 138 FIDADKQNNPAYFEWALKLSR---PGTVIIGDNVVR 170 (223)
T ss_dssp EECSCGGGHHHHHHHHHHTCC---TTCEEEEESCSG
T ss_pred EEcCCcHHHHHHHHHHHHhcC---CCcEEEEeCCCc
Confidence 445555667899999999999 999777766544
No 133
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=87.90 E-value=0.48 Score=34.79 Aligned_cols=32 Identities=19% Similarity=0.165 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCC
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQ 43 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~ 43 (100)
.+..+.|+++++.|+ |||+|++.|.+.+++..
T Consensus 265 pdl~~aL~Ei~RvLK---PGGrIVssE~f~p~d~~ 296 (438)
T 3uwp_A 265 PEVDHQLKERFANMK---EGGRIVSSKPFAPLNFR 296 (438)
T ss_dssp HHHHHHHHHHHTTSC---TTCEEEESSCSSCTTCC
T ss_pred chHHHHHHHHHHcCC---CCcEEEEeecccCCCCC
Confidence 345677789999999 99999999999887553
No 134
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=87.86 E-value=0.14 Score=34.32 Aligned_cols=51 Identities=12% Similarity=0.104 Sum_probs=35.4
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCcee
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~ 84 (100)
|+++. .++|+++.+.|+ |||++++..... ...+++.++++++||+.+
T Consensus 186 ~~~~~--~~~l~~~~~~Lk---pgG~l~i~~~~~----------------------------~~~~~~~~~l~~~Gf~~~ 232 (275)
T 1yb2_A 186 DIPDP--WNHVQKIASMMK---PGSVATFYLPNF----------------------------DQSEKTVLSLSASGMHHL 232 (275)
T ss_dssp CCSCG--GGSHHHHHHTEE---EEEEEEEEESSH----------------------------HHHHHHHHHSGGGTEEEE
T ss_pred cCcCH--HHHHHHHHHHcC---CCCEEEEEeCCH----------------------------HHHHHHHHHHHHCCCeEE
Confidence 44443 478999999999 899998876211 013466677778888887
Q ss_pred EEEe
Q 040309 85 KITP 88 (100)
Q Consensus 85 ~v~~ 88 (100)
++..
T Consensus 233 ~~~~ 236 (275)
T 1yb2_A 233 ETVE 236 (275)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7754
No 135
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=87.75 E-value=0.18 Score=31.83 Aligned_cols=28 Identities=18% Similarity=0.289 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 8 DEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 8 d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
.++..++|+++++.|+ |||++++.+...
T Consensus 135 ~~~~~~~l~~~~~~Lk---pgG~li~~~~~~ 162 (215)
T 2pxx_A 135 VHTVDQVLSEVSRVLV---PGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHHHHHHEE---EEEEEEEEESCC
T ss_pred hHHHHHHHHHHHHhCc---CCCEEEEEeCCC
Confidence 4567899999999999 999999988543
No 136
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=87.64 E-value=3.4 Score=29.41 Aligned_cols=74 Identities=11% Similarity=0.090 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc-----hhhhh-hhhhhhhcc----------cccCceecCHHHHH
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK-----ESMET-QLCFDILMV----------SLFRGKERSVDDWK 73 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~-----~~~~~-~~~~dl~ml----------~~~~g~~rt~~e~~ 73 (100)
+-..+|+..++.|+ |||++++.=.-.++....+ -+... ..+.|+.-- .+..-.-+|.+|++
T Consensus 187 D~~~FL~~Ra~EL~---pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~ 263 (359)
T 1m6e_X 187 DHALFLRCRAQEVV---PGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVE 263 (359)
T ss_dssp HHHHHHHHHHHHBC---TTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHH
T ss_pred HHHHHHHHHHHHhc---CCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHH
Confidence 45678999999999 9999987765554321100 01001 112222110 01234577999999
Q ss_pred HHHHHcC-CceeEE
Q 040309 74 KLFLAAG-FSHYKI 86 (100)
Q Consensus 74 ~ll~~aG-f~~~~v 86 (100)
.+++++| |++.++
T Consensus 264 ~~ie~~G~F~i~~~ 277 (359)
T 1m6e_X 264 AEILKEGSFLIDHI 277 (359)
T ss_dssp HHHHHTTTBCCEEE
T ss_pred HHHHHcCCceEEEE
Confidence 9999996 577765
No 137
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=87.61 E-value=0.28 Score=32.85 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
.++|+++.++|+ |||++++.+... ...+++.+.|+++||+.+++..
T Consensus 193 ~~~l~~~~~~L~---pgG~l~~~~~~~----------------------------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 193 WNYIDKCWEALK---GGGRFATVCPTT----------------------------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp GGTHHHHHHHEE---EEEEEEEEESSH----------------------------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred HHHHHHHHHHcC---CCCEEEEEeCCH----------------------------HHHHHHHHHHHHCCCceeEEEE
Confidence 477888888888 888888876211 0134566677788888777654
No 138
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=87.39 E-value=0.96 Score=28.95 Aligned_cols=43 Identities=16% Similarity=0.200 Sum_probs=32.6
Q ss_pred HHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEE
Q 040309 14 LLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 14 iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~ 87 (100)
+++++.+.|+ |||++++..... .+.++..+++++.||++.++.
T Consensus 136 ~l~~~~~~Lk---pgG~lv~~~~~~----------------------------~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 136 LYDRLWEWLA---PGTRIVANAVTL----------------------------ESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp HHHHHHHHSC---TTCEEEEEECSH----------------------------HHHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHHHHhcC---CCcEEEEEecCc----------------------------ccHHHHHHHHHhCCCcEEEEE
Confidence 8999999999 899988754321 134577788889998887763
No 139
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=87.25 E-value=0.64 Score=30.70 Aligned_cols=33 Identities=9% Similarity=0.018 Sum_probs=25.1
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
+-|.+......+|+++.+.|+ |||.|++.+...
T Consensus 141 ~~d~~~~~~~~~l~~~~~~Lk---pGG~lv~~~~~~ 173 (248)
T 3tfw_A 141 FIDADKPNNPHYLRWALRYSR---PGTLIIGDNVVR 173 (248)
T ss_dssp EECSCGGGHHHHHHHHHHTCC---TTCEEEEECCSG
T ss_pred EECCchHHHHHHHHHHHHhcC---CCeEEEEeCCCc
Confidence 335555667889999999999 999887766543
No 140
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.02 E-value=6.4 Score=29.93 Aligned_cols=80 Identities=14% Similarity=0.135 Sum_probs=50.6
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcc--cccC-ceecCHHHHHHHHHH
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMV--SLFR-GKERSVDDWKKLFLA 78 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml--~~~~-g~~rt~~e~~~ll~~ 78 (100)
+|.-.+.+++.++|+.+.+ ++ ++.+++.|.+.+..... ++.+.. ...+... .+.. -...|.++..+.|.+
T Consensus 226 vl~Yl~~~~~~~ll~~~~~-~~----~~~~~~~e~~~~~~~~d-~f~~~m-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~ 298 (695)
T 2zwa_A 226 SLAYMKPERSDSIIEATSK-ME----NSHFIILEQLIPKGPFE-PFSKQM-LAHFKRNDSPLQSVLKYNTIESQVQRFNK 298 (695)
T ss_dssp SGGGSCHHHHHHHHHHHHT-SS----SEEEEEEEECCTTCTTS-HHHHHH-HHHHHHTTCCCCGGGTCCSHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHHhh-CC----CceEEEEEeecCCCCCC-hHHHHH-HHHHHHcCCCCCccccCCCHHHHHHHHHH
Confidence 5666788999999999874 44 67899999987754333 221110 0011100 0011 234589999999999
Q ss_pred cCCceeEEEe
Q 040309 79 AGFSHYKITP 88 (100)
Q Consensus 79 aGf~~~~v~~ 88 (100)
+||+.+....
T Consensus 299 ~Gw~~v~~~~ 308 (695)
T 2zwa_A 299 LGFAYVNVGD 308 (695)
T ss_dssp TTCCEEEEEE
T ss_pred CCCCCcceee
Confidence 9998866553
No 141
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=86.48 E-value=0.21 Score=33.10 Aligned_cols=81 Identities=15% Similarity=0.127 Sum_probs=44.8
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCC----Cchhhhhhhhhhhhccc------ccCceecCHHHH
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQ----DKESMETQLCFDILMVS------LFRGKERSVDDW 72 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~----~~~~~~~~~~~dl~ml~------~~~g~~rt~~e~ 72 (100)
+++|.++ ..++|+++++.|+ |||++++.......... ...+......+.-.... ......+|.+|+
T Consensus 124 ~~~~~~~-~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (260)
T 2avn_A 124 VLSYVEN-KDKAFSEIRRVLV---PDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDL 199 (260)
T ss_dssp HHHHCSC-HHHHHHHHHHHEE---EEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGG
T ss_pred hhhcccc-HHHHHHHHHHHcC---CCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHH
Confidence 4455333 7899999999999 99999987653210000 00000000000000000 001125688898
Q ss_pred HHHHHHcCCceeEEEecC
Q 040309 73 KKLFLAAGFSHYKITPIL 90 (100)
Q Consensus 73 ~~ll~~aGf~~~~v~~~~ 90 (100)
.++ |||+++++....
T Consensus 200 ~~l---aGf~~~~~~~~~ 214 (260)
T 2avn_A 200 DSL---EGFETVDIRGIG 214 (260)
T ss_dssp SSC---TTEEEEEEEEEC
T ss_pred HHh---cCceEEEEECCC
Confidence 888 999999987654
No 142
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=86.34 E-value=0.74 Score=31.22 Aligned_cols=31 Identities=13% Similarity=0.142 Sum_probs=26.5
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
++|+|++++..+.|+++++.|+ ||++++.-.
T Consensus 119 ~l~~~~~~~~~~~l~~l~~lLP----GG~l~lS~~ 149 (261)
T 3iv6_A 119 LINRFTTEEARRACLGMLSLVG----SGTVRASVK 149 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHT----TSEEEEEEE
T ss_pred hhHhCCHHHHHHHHHHHHHhCc----CcEEEEEec
Confidence 6899999999999999999884 899887643
No 143
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=84.85 E-value=0.37 Score=30.91 Aligned_cols=34 Identities=9% Similarity=0.156 Sum_probs=26.4
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
+.|.+......+++++.+.|+ |||.|++.+...+
T Consensus 145 ~~~~~~~~~~~~l~~~~~~L~---pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 145 YIDADKANTDLYYEESLKLLR---EGGLIAVDNVLRR 178 (225)
T ss_dssp EECSCGGGHHHHHHHHHHHEE---EEEEEEEECSSGG
T ss_pred EECCCHHHHHHHHHHHHHhcC---CCcEEEEeCCCcC
Confidence 344555567889999999999 9999998776653
No 144
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=84.64 E-value=1.9 Score=28.95 Aligned_cols=50 Identities=12% Similarity=0.206 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeE
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~ 85 (100)
..++++++.+.|+ |||++++.++...... .....+++.+.++++||+...
T Consensus 204 ~~~~l~~~~~~Lk---pgG~l~~~~~~~~~~~----------------------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 204 THEFIPKALSIAK---DGAIIHYHNTVPEKLM----------------------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp GGGGHHHHHHHEE---EEEEEEEEEEEEGGGT----------------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCC---CCeEEEEEEeeccccc----------------------cccHHHHHHHHHHHcCCeeEE
Confidence 4678899999999 8999999887642100 123567888999999998876
No 145
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=84.37 E-value=2 Score=27.35 Aligned_cols=20 Identities=25% Similarity=0.484 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
..+|+++.+.|+ |||.+++.
T Consensus 136 ~~~l~~~~~~Lk---pgG~l~~~ 155 (214)
T 1yzh_A 136 KTFLDTFKRILP---ENGEIHFK 155 (214)
T ss_dssp HHHHHHHHHHSC---TTCEEEEE
T ss_pred HHHHHHHHHHcC---CCcEEEEE
Confidence 579999999999 99998874
No 146
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=83.28 E-value=0.38 Score=33.44 Aligned_cols=28 Identities=14% Similarity=0.277 Sum_probs=24.4
Q ss_pred CChHHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 6 WNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 6 w~d~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
++.+...++++++++.|+ |||+++++..
T Consensus 277 ~~~~~~~~~l~~~~~~Lk---pgG~l~i~~~ 304 (343)
T 2pjd_A 277 TSLDAAQTLIRGAVRHLN---SGGELRIVAN 304 (343)
T ss_dssp HHHHHHHHHHHHHGGGEE---EEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCC---CCcEEEEEEc
Confidence 456778999999999999 9999999875
No 147
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=83.22 E-value=0.021 Score=39.66 Aligned_cols=72 Identities=8% Similarity=0.009 Sum_probs=20.8
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhh---hhhhcccccCcee-------cCHHHHHHHHHHcCCc
Q 040309 13 KLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLC---FDILMVSLFRGKE-------RSVDDWKKLFLAAGFS 82 (100)
Q Consensus 13 ~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~---~dl~ml~~~~g~~-------rt~~e~~~ll~~aGf~ 82 (100)
.+++++++.|+ |||++++.....+.... ........ +..........+. +...+|.+.|++|||+
T Consensus 200 ~~l~~~~~~Lk---pgG~lv~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~ 274 (336)
T 2b25_A 200 VTLPVFYPHLK---HGGVCAVYVVNITQVIE--LLDGIRTCELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINT 274 (336)
T ss_dssp TTHHHHGGGEE---EEEEEEEEESSHHHHHH--HHHHHHHHTCCEEEEEEECCCCCCEEECC------------------
T ss_pred HHHHHHHHhcC---CCcEEEEEeCCHHHHHH--HHHHHHhcCCCcccceEEEecccceEEEeecccccchhhhhcccccc
Confidence 37899999999 99999977643211000 00000000 0000000001111 1123999999999999
Q ss_pred eeEEEec
Q 040309 83 HYKITPI 89 (100)
Q Consensus 83 ~~~v~~~ 89 (100)
.+++...
T Consensus 275 ~v~~~~~ 281 (336)
T 2b25_A 275 DVQLDSQ 281 (336)
T ss_dssp -------
T ss_pred ccccccc
Confidence 9887543
No 148
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=81.39 E-value=2.2 Score=27.90 Aligned_cols=27 Identities=19% Similarity=0.341 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 040309 8 DEESVKLLKKCKEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 8 d~~~~~iL~~~~~al~~~~pgg~lli~e~v 37 (100)
.+...++++++++.|+ |||++++.+..
T Consensus 190 ~~~~~~~l~~~~~~Lk---pgG~l~~~~~~ 216 (250)
T 1o9g_A 190 GQPVAGLLRSLASALP---AHAVIAVTDRS 216 (250)
T ss_dssp HHHHHHHHHHHHHHSC---TTCEEEEEESS
T ss_pred ccHHHHHHHHHHHhcC---CCcEEEEeCcc
Confidence 3677899999999999 99999986543
No 149
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=81.01 E-value=1.2 Score=29.03 Aligned_cols=49 Identities=18% Similarity=0.188 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
...+++.+++.|+ |||++++.+... . .. ..+++.+.++++||++.++..
T Consensus 153 ~~~~l~~~~~~Lk---pgG~l~~~~g~~-----~----~~-----------------~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 153 LSVLSELCLPLVK---KNGLFVALKAAS-----A----EE-----------------ELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp HHHHHHHHGGGEE---EEEEEEEEECC------C----HH-----------------HHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHHhcC---CCCEEEEEeCCC-----c----hH-----------------HHHHHHHHHHHcCCeEeEEEE
Confidence 4688999999999 899998863110 0 00 125778899999999988754
No 150
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=79.99 E-value=0.43 Score=30.43 Aligned_cols=33 Identities=6% Similarity=0.192 Sum_probs=24.4
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
+.|.+..+...+++++++.|+ |||.+++.+...
T Consensus 131 ~~~~~~~~~~~~l~~~~~~Lk---pgG~lv~~~~~~ 163 (210)
T 3c3p_A 131 FMDCDVFNGADVLERMNRCLA---KNALLIAVNALR 163 (210)
T ss_dssp EEETTTSCHHHHHHHHGGGEE---EEEEEEEESSSS
T ss_pred EEcCChhhhHHHHHHHHHhcC---CCeEEEEECccc
Confidence 334444556889999999999 899888766443
No 151
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=79.45 E-value=0.99 Score=27.90 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
++..++|+++.+.|+ |||++++..+...+.+.. + .....+|.+.+...+|++.+...
T Consensus 112 ~~~~~~l~~~~~~Lk---pgG~l~i~~~~~~~~~~~----~----------------~~~~~~~~~~l~~~~~~~~~~~~ 168 (185)
T 3mti_A 112 HTTLEAIEKILDRLE---VGGRLAIMIYYGHDGGDM----E----------------KDAVLEYVIGLDQRVFTAMLYQP 168 (185)
T ss_dssp HHHHHHHHHHHHHEE---EEEEEEEEEC------CH----H----------------HHHHHHHHHHSCTTTEEEEEEEE
T ss_pred hhHHHHHHHHHHhcC---CCcEEEEEEeCCCCCCHH----H----------------HHHHHHHHHhCCCceEEEEEehh
Confidence 566788999999999 999999987543221110 0 01234566666667888887765
Q ss_pred c
Q 040309 89 I 89 (100)
Q Consensus 89 ~ 89 (100)
.
T Consensus 169 ~ 169 (185)
T 3mti_A 169 L 169 (185)
T ss_dssp S
T ss_pred h
Confidence 5
No 152
>3aaf_A Werner syndrome ATP-dependent helicase; helix-turn-helix, winged-helix, protein-DNA complex, DNA-BIN helicase; HET: DNA; 1.90A {Homo sapiens} PDB: 2axl_A
Probab=78.89 E-value=0.97 Score=27.64 Aligned_cols=71 Identities=23% Similarity=0.179 Sum_probs=45.7
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccC-ceecCHHHHHHHHHHc---C
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFR-GKERSVDDWKKLFLAA---G 80 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~-g~~rt~~e~~~ll~~a---G 80 (100)
|+.+ ++.++|+.+++. +. .-|.-.|+|.+....... ... . ...+..+| |+.++.++|++++.+. |
T Consensus 13 D~T~-~AqkiLs~V~r~-~~--rfG~~~iidvLrGs~~~k-----i~~-~-~~~l~tfGigk~~s~~~w~~lirqLi~~G 81 (134)
T 3aaf_A 13 DFGP-QAFKLLSAVDIL-GE--KFGIGLPILFLRGSNSQR-----LAD-Q-YRRHSLFGTGKDQTESWWKAFSRQLITEG 81 (134)
T ss_dssp ECHH-HHHHHHHHHHHT-TT--CSCTHHHHHHHTTCCCTT-----SCG-G-GGGSTTTTTTTTSCHHHHHHHHHHHHHTT
T ss_pred CchH-HHHHHHHHHHHH-cC--cccccchhhhhcCCcHHH-----HHH-H-hCCCCccCCCCCCCHHHHHHHHHHHHHcC
Confidence 4443 588999998874 43 567777778766543322 111 1 33345667 9999999999999854 8
Q ss_pred CceeEE
Q 040309 81 FSHYKI 86 (100)
Q Consensus 81 f~~~~v 86 (100)
|=....
T Consensus 82 ~L~~~~ 87 (134)
T 3aaf_A 82 FLVEVS 87 (134)
T ss_dssp SEEEEE
T ss_pred Cceeec
Confidence 655443
No 153
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=78.80 E-value=1.1 Score=30.82 Aligned_cols=23 Identities=17% Similarity=0.086 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
...++|+.+++.|+ |||++++..
T Consensus 149 l~~~~l~~a~r~Lk---pGG~~v~~~ 171 (290)
T 2xyq_A 149 FFTYLCGFIKQKLA---LGGSIAVKI 171 (290)
T ss_dssp HHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred HHHHHHHHHHHhcC---CCcEEEEEE
Confidence 35689999999999 999999864
No 154
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=78.66 E-value=1.8 Score=31.60 Aligned_cols=30 Identities=20% Similarity=0.154 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCC
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQ 41 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~ 41 (100)
++..+.|+++.+.|+ |||+|++.|.+.+..
T Consensus 336 ~d~~~~L~el~r~LK---pGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 336 EDLNKKVEKILQTAK---VGCKIISLKSLRSLT 365 (433)
T ss_dssp HHHHHHHHHHHTTCC---TTCEEEESSCSSCTT
T ss_pred ccHHHHHHHHHHhCC---CCeEEEEeeccCCcc
Confidence 445678899999999 999999999887765
No 155
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=78.65 E-value=5.1 Score=26.81 Aligned_cols=23 Identities=13% Similarity=0.211 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhCC---CCCCCcEEEEE
Q 040309 11 SVKLLKKCKEAIP---SKDEGGKVIII 34 (100)
Q Consensus 11 ~~~iL~~~~~al~---~~~pgg~lli~ 34 (100)
...+++.+.+.|+ +. +||+++++
T Consensus 179 ~~~ll~~l~~~Lk~~~p~-~gG~l~v~ 204 (281)
T 3bzb_A 179 HDALLRSVKMLLALPAND-PTAVALVT 204 (281)
T ss_dssp HHHHHHHHHHHBCCTTTC-TTCEEEEE
T ss_pred HHHHHHHHHHHhcccCCC-CCCEEEEE
Confidence 5678888888887 32 47887663
No 156
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=78.61 E-value=0.39 Score=31.35 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=24.5
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
+.|.+......+++++.+.|+ |||.|++.+...
T Consensus 147 ~~~~~~~~~~~~l~~~~~~Lk---pgG~lv~d~~~~ 179 (232)
T 3ntv_A 147 FIDAAKAQSKKFFEIYTPLLK---HQGLVITDNVLY 179 (232)
T ss_dssp EEETTSSSHHHHHHHHGGGEE---EEEEEEEECTTG
T ss_pred EEcCcHHHHHHHHHHHHHhcC---CCeEEEEeeCCc
Confidence 344555567889999999999 899887755443
No 157
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=77.86 E-value=1.7 Score=26.35 Aligned_cols=22 Identities=14% Similarity=0.376 Sum_probs=19.3
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.++++++++.|+ |||++++.+.
T Consensus 107 ~~~l~~~~~~L~---~gG~l~~~~~ 128 (178)
T 3hm2_A 107 PGVFAAAWKRLP---VGGRLVANAV 128 (178)
T ss_dssp TTHHHHHHHTCC---TTCEEEEEEC
T ss_pred HHHHHHHHHhcC---CCCEEEEEee
Confidence 678999999999 9999998764
No 158
>3fpn_B Geobacillus stearothermophilus UVRB interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=77.74 E-value=1.7 Score=25.49 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=30.9
Q ss_pred cccCceecCHHHHHHHHHHcCCceeEEEecCCcc----eEEEEeC
Q 040309 60 SLFRGKERSVDDWKKLFLAAGFSHYKITPILGVR----SLIEAYP 100 (100)
Q Consensus 60 ~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~~~~----~vie~~p 100 (100)
...-|.+.+.+++.+.|.+.|++.+..+...|.+ ++|+++|
T Consensus 16 ~l~~G~~i~~~~l~~~L~~~GY~r~~~v~~~Gef~vRG~iiDIfp 60 (106)
T 3fpn_B 16 SLRVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVEIFP 60 (106)
T ss_dssp EEETTCBCCHHHHHHHHHHTTCEECTTCCCTTEEEEETTEEEEEC
T ss_pred EEECCCCcCHHHHHHHHHHcCCEECCccCCcEEEEEECCEEEEec
Confidence 3446999999999999999999988765554433 4666654
No 159
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=77.08 E-value=0.89 Score=29.14 Aligned_cols=32 Identities=13% Similarity=0.356 Sum_probs=24.5
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 4 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
-|.+.....++++++.+.|+ |||.+++.+...
T Consensus 151 ~d~~~~~~~~~l~~~~~~L~---pgG~lv~~~~~~ 182 (229)
T 2avd_A 151 VDADKENCSAYYERCLQLLR---PGGILAVLRVLW 182 (229)
T ss_dssp ECSCSTTHHHHHHHHHHHEE---EEEEEEEECCSG
T ss_pred ECCCHHHHHHHHHHHHHHcC---CCeEEEEECCCc
Confidence 34445556789999999999 899988877543
No 160
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=76.47 E-value=1.9 Score=28.44 Aligned_cols=30 Identities=10% Similarity=0.159 Sum_probs=22.9
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v 37 (100)
|.+......+++++.+.|+ |||.|++.+..
T Consensus 163 d~~~~~~~~~l~~~~~~Lk---pGG~lv~d~~~ 192 (247)
T 1sui_A 163 DADKDNYLNYHKRLIDLVK---VGGVIGYDNTL 192 (247)
T ss_dssp CSCSTTHHHHHHHHHHHBC---TTCCEEEECTT
T ss_pred cCchHHHHHHHHHHHHhCC---CCeEEEEecCC
Confidence 4444556889999999999 99988776543
No 161
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=76.24 E-value=0.49 Score=30.66 Aligned_cols=31 Identities=6% Similarity=0.147 Sum_probs=23.6
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 040309 4 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v 37 (100)
-+++..+..++|+++.+.|+ |||++++.+..
T Consensus 132 ~~~~~~~~~~~l~~~~~~L~---pgG~lv~~~~~ 162 (233)
T 2gpy_A 132 IDAAKGQYRRFFDMYSPMVR---PGGLILSDNVL 162 (233)
T ss_dssp EEGGGSCHHHHHHHHGGGEE---EEEEEEEETTT
T ss_pred ECCCHHHHHHHHHHHHHHcC---CCeEEEEEcCC
Confidence 34444456789999999999 99999887543
No 162
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=76.22 E-value=2.6 Score=29.24 Aligned_cols=23 Identities=4% Similarity=0.182 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
+-.++++++++.|+ |||+|++.+
T Consensus 200 d~~~~l~el~r~Lk---PGG~Lvv~~ 222 (298)
T 3fpf_A 200 PKRRVFRNIHRYVD---TETRIIYRT 222 (298)
T ss_dssp CHHHHHHHHHHHCC---TTCEEEEEE
T ss_pred CHHHHHHHHHHHcC---CCcEEEEEc
Confidence 34689999999999 999999987
No 163
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=76.04 E-value=1.5 Score=30.13 Aligned_cols=25 Identities=28% Similarity=0.509 Sum_probs=21.4
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
.++|+++.+.|+ |||++++..+.+.
T Consensus 226 ~~~L~~~~~~Lk---pGG~lv~stcs~~ 250 (315)
T 1ixk_A 226 MRLLEKGLEVLK---PGGILVYSTCSLE 250 (315)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEESCCC
T ss_pred HHHHHHHHHhCC---CCCEEEEEeCCCC
Confidence 589999999999 9999998776543
No 164
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=75.90 E-value=0.99 Score=29.40 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=24.7
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 4 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
.|.+..+...+++++.+.|+ |||.|++.+...
T Consensus 154 ~d~~~~~~~~~l~~~~~~Lk---pgG~lv~~~~~~ 185 (232)
T 3cbg_A 154 IDADKRNYPRYYEIGLNLLR---RGGLMVIDNVLW 185 (232)
T ss_dssp ECSCGGGHHHHHHHHHHTEE---EEEEEEEECTTG
T ss_pred ECCCHHHHHHHHHHHHHHcC---CCeEEEEeCCCc
Confidence 34445567889999999999 899988876544
No 165
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=75.69 E-value=1.5 Score=27.26 Aligned_cols=22 Identities=18% Similarity=0.353 Sum_probs=19.4
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.++|+++.+.|+ |||++++...
T Consensus 125 ~~~l~~~~~~Lk---pgG~lv~~~~ 146 (196)
T 2nyu_A 125 LTLLSVTPDILQ---PGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEEC
T ss_pred HHHHHHHHHHhc---CCCEEEEEec
Confidence 588999999999 9999998764
No 166
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=75.35 E-value=1.5 Score=20.04 Aligned_cols=19 Identities=32% Similarity=0.758 Sum_probs=15.3
Q ss_pred HHHHHHHHHHhCCCCCCCcEEE
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVI 32 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~ll 32 (100)
|+.+++++...++ ++||.+
T Consensus 4 cr~likriqa~ip---k~grml 22 (34)
T 1ssz_A 4 CRALIKRIQAMIP---KGGRML 22 (34)
T ss_dssp HHHHHHHHHHHCS---SSCCCC
T ss_pred HHHHHHHHHHHcc---ccchhh
Confidence 7889999988888 788753
No 167
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=75.20 E-value=1.4 Score=28.89 Aligned_cols=31 Identities=13% Similarity=0.180 Sum_probs=23.6
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
+-|.+......+++++.+.|+ |||.|++.+.
T Consensus 152 ~~d~~~~~~~~~l~~~~~~L~---pGG~lv~d~~ 182 (237)
T 3c3y_A 152 FVDADKPNYIKYHERLMKLVK---VGGIVAYDNT 182 (237)
T ss_dssp EECSCGGGHHHHHHHHHHHEE---EEEEEEEECT
T ss_pred EECCchHHHHHHHHHHHHhcC---CCeEEEEecC
Confidence 445555667899999999999 8998766543
No 168
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=75.08 E-value=2.8 Score=28.20 Aligned_cols=27 Identities=19% Similarity=0.164 Sum_probs=18.9
Q ss_pred CceecC---HHHHHHHHHHcCCceeEEEec
Q 040309 63 RGKERS---VDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 63 ~g~~rt---~~e~~~ll~~aGf~~~~v~~~ 89 (100)
+|.-.| ...+++-|.+|||++.++...
T Consensus 206 GG~l~tysaa~~vrr~L~~aGF~v~~~~g~ 235 (257)
T 2qy6_A 206 GGTLATFTSAGFVRRGLQEAGFTMQKRKGF 235 (257)
T ss_dssp EEEEEESCCBHHHHHHHHHHTEEEEEECCS
T ss_pred CcEEEEEeCCHHHHHHHHHCCCEEEeCCCC
Confidence 444443 457889999999998876443
No 169
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=74.53 E-value=5.6 Score=24.58 Aligned_cols=29 Identities=10% Similarity=0.086 Sum_probs=23.3
Q ss_pred CChHHHHHHHHHHHH--hCCCCCCCcEEEEEeee
Q 040309 6 WNDEESVKLLKKCKE--AIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 6 w~d~~~~~iL~~~~~--al~~~~pgg~lli~e~v 37 (100)
+..++..++++.+.+ .|+ |||++++....
T Consensus 125 ~~~~~~~~~l~~~~~~~~L~---pgG~l~~~~~~ 155 (189)
T 3p9n_A 125 VDSADVDAILAALGTNGWTR---EGTVAVVERAT 155 (189)
T ss_dssp SCHHHHHHHHHHHHHSSSCC---TTCEEEEEEET
T ss_pred cchhhHHHHHHHHHhcCccC---CCeEEEEEecC
Confidence 344678899999998 999 99999886654
No 170
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=74.06 E-value=2.2 Score=25.46 Aligned_cols=23 Identities=17% Similarity=0.496 Sum_probs=20.0
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeee
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v 37 (100)
.++++++.+.|+ |||++++....
T Consensus 116 ~~~l~~~~~~L~---~gG~l~~~~~~ 138 (180)
T 1ej0_A 116 ELALEMCRDVLA---PGGSFVVKVFQ 138 (180)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEEES
T ss_pred HHHHHHHHHHcC---CCcEEEEEEec
Confidence 689999999999 99999987653
No 171
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=73.65 E-value=0.7 Score=30.15 Aligned_cols=33 Identities=12% Similarity=0.246 Sum_probs=24.1
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
+-|.+..+...+++++.+.|+ |||.|++.+...
T Consensus 134 ~~d~~~~~~~~~l~~~~~~Lk---pGG~lv~dn~~~ 166 (221)
T 3dr5_A 134 FGQVSPMDLKALVDAAWPLLR---RGGALVLADALL 166 (221)
T ss_dssp EECCCTTTHHHHHHHHHHHEE---EEEEEEETTTTG
T ss_pred EEcCcHHHHHHHHHHHHHHcC---CCcEEEEeCCCC
Confidence 334444556789999999999 899888755443
No 172
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=71.18 E-value=4.5 Score=21.50 Aligned_cols=20 Identities=10% Similarity=0.120 Sum_probs=17.1
Q ss_pred cCHHHHHHHHHHcCCceeEE
Q 040309 67 RSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~~v 86 (100)
.+..|..++|+++||..++.
T Consensus 5 ~~~~elik~L~~~G~~~~r~ 24 (70)
T 1whz_A 5 PRPEEVARKLRRLGFVERMA 24 (70)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCEEeCC
Confidence 47889999999999998754
No 173
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=71.16 E-value=7.2 Score=23.27 Aligned_cols=27 Identities=11% Similarity=0.215 Sum_probs=22.6
Q ss_pred ChHHHHHHHHHHHHhCCCCCCC--cEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDEG--GKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~pg--g~lli~e~ 36 (100)
+|+++.+++..+.+++. .| |++.|.+.
T Consensus 82 ~de~ve~vv~~I~~~~~---tg~~GkIFV~~V 110 (119)
T 2cz4_A 82 SEEVALRILQRLQEEYF---PHYAVIAYVENV 110 (119)
T ss_dssp CHHHHHHHHHHHHHHTT---TTSCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhc---CCCCEEEEEEEe
Confidence 68899999999997777 45 99999885
No 174
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=70.20 E-value=3.1 Score=27.84 Aligned_cols=25 Identities=12% Similarity=0.296 Sum_probs=21.6
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
.++|+++.+.|+ |||++++..+.+.
T Consensus 191 ~~~l~~~~~~Lk---pgG~lv~stcs~~ 215 (274)
T 3ajd_A 191 KELIDIGIDLLK---KDGELVYSTCSME 215 (274)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEESCCC
T ss_pred HHHHHHHHHhCC---CCCEEEEEECCCC
Confidence 789999999999 9999998876554
No 175
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=68.90 E-value=1.8 Score=31.62 Aligned_cols=31 Identities=19% Similarity=0.095 Sum_probs=24.9
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
.|.|. +..+.|+++++.|+ |||.++|.|...
T Consensus 297 sH~~~--d~~~aL~el~rvLK---PGGvlVi~Dl~t 327 (419)
T 3sso_A 297 SHINA--HVRTSFAALFPHVR---PGGLYVIEDMWT 327 (419)
T ss_dssp CCCHH--HHHHHHHHHGGGEE---EEEEEEEECGGG
T ss_pred cccch--hHHHHHHHHHHhcC---CCeEEEEEeccc
Confidence 35543 46789999999999 999999998763
No 176
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=68.48 E-value=1.5 Score=38.43 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEE
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~ 87 (100)
..+.|+++++.|+ |||+|++.|...... .. .....++-. ....+..-+.++|.++|.++||..+.+.
T Consensus 1327 ~~~~l~~~~~lL~---p~G~l~~~e~~~~~~-~g----~~~~~~~~~--~r~~~~~~~~~~w~~~l~~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1327 PAVAVGNMAATLK---EGGFLLLHTLLAGHP-LG----EMVGFLTSP--EQGGRHLLSQDQWESLFAGASLHLVALK 1393 (2512)
T ss_dssp -----------------CCEEEEEEC---------------------------------CTTTTSSTTTTEEEEEEE
T ss_pred HHHHHHHHHHhcC---CCcEEEEEecccccc-cc----ccccccccc--cccCCcccCHHHHHHHHHhCCCceeeec
Confidence 4568999999999 999999988532100 00 000001100 0001233577899999999999987654
No 177
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=67.84 E-value=3.7 Score=25.52 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=17.5
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e 35 (100)
.++|+++++.|+ |||++++..
T Consensus 134 ~~~l~~~~~~Lk---pgG~lv~~~ 154 (201)
T 2plw_A 134 LSITHFMEQYIN---IGGTYIVKM 154 (201)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEE
T ss_pred HHHHHHHHHHcc---CCCEEEEEE
Confidence 358999999999 999988743
No 178
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=67.27 E-value=4.1 Score=26.62 Aligned_cols=24 Identities=29% Similarity=0.471 Sum_probs=20.4
Q ss_pred HHHHHHHHHHH-hCCCCCCCcEEEEEee
Q 040309 10 ESVKLLKKCKE-AIPSKDEGGKVIIIDM 36 (100)
Q Consensus 10 ~~~~iL~~~~~-al~~~~pgg~lli~e~ 36 (100)
+..++|+++.+ .|+ |||++++.|.
T Consensus 164 ~~~~~l~~~~r~~Lk---pGG~lv~~d~ 188 (236)
T 2bm8_A 164 NTFNIMKWAVDHLLE---EGDYFIIEDM 188 (236)
T ss_dssp SHHHHHHHHHHHTCC---TTCEEEECSC
T ss_pred hHHHHHHHHHHhhCC---CCCEEEEEeC
Confidence 35678999996 999 9999999886
No 179
>2dwf_A Pulmonary surfactant-associated protein B; mini-B, SP-B, surfactant protein B, lipid associated protein, surface active protein; NMR {Synthetic} SCOP: j.35.1.1 PDB: 2jou_A
Probab=67.00 E-value=2.8 Score=19.45 Aligned_cols=18 Identities=33% Similarity=0.748 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhCCCCCCCcEE
Q 040309 11 SVKLLKKCKEAIPSKDEGGKV 31 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~l 31 (100)
|..+++++....+ +||++
T Consensus 4 Crtlikriq~vIP---k~~r~ 21 (34)
T 2dwf_A 4 CRALIKRIQAMIP---KGGRM 21 (34)
T ss_dssp HHHHHHHHHHHCT---TCCSC
T ss_pred HHHHHHHHHhhcC---Ccccc
Confidence 6788999888888 67543
No 180
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=66.67 E-value=4.7 Score=28.21 Aligned_cols=25 Identities=0% Similarity=-0.125 Sum_probs=21.6
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
..++|++++++|+ |||++++++...
T Consensus 256 ~~~~l~~~~~~Lk---pgG~~~~~~~~~ 280 (373)
T 2qm3_A 256 IRAFVGRGIATLK---GPRCAGYFGITR 280 (373)
T ss_dssp HHHHHHHHHHTBC---STTCEEEEEECT
T ss_pred HHHHHHHHHHHcc---cCCeEEEEEEec
Confidence 5889999999999 999988888654
No 181
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=66.11 E-value=1.7 Score=31.47 Aligned_cols=25 Identities=20% Similarity=0.392 Sum_probs=22.1
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
.++|+++.+.|+ |||+|++..+.+.
T Consensus 369 ~~iL~~a~~~Lk---pGG~lvy~tcs~~ 393 (450)
T 2yxl_A 369 RELLESAARLVK---PGGRLLYTTCSIF 393 (450)
T ss_dssp HHHHHHHHTTEE---EEEEEEEEESCCC
T ss_pred HHHHHHHHHhcC---CCcEEEEEeCCCC
Confidence 689999999999 9999999987664
No 182
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=65.65 E-value=13 Score=22.18 Aligned_cols=18 Identities=11% Similarity=0.180 Sum_probs=14.3
Q ss_pred HHHHHHHHHHcCCceeEE
Q 040309 69 VDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 69 ~~e~~~ll~~aGf~~~~v 86 (100)
..+..++++++||.+..+
T Consensus 137 ~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 137 AAKIINEFESRGYNVDAV 154 (183)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCeEEEE
Confidence 467889999999877655
No 183
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=65.25 E-value=4.9 Score=29.49 Aligned_cols=25 Identities=16% Similarity=0.363 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
.+||+++.+.|+ |||+|+...+.+.
T Consensus 226 ~~iL~~a~~~Lk---pGG~LvysTcs~~ 250 (479)
T 2frx_A 226 RELIDSAFHALR---PGGTLVYSTCTLN 250 (479)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEESCCS
T ss_pred HHHHHHHHHhcC---CCCEEEEecccCC
Confidence 578999999999 9999998876543
No 184
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=63.54 E-value=1.9 Score=28.21 Aligned_cols=20 Identities=35% Similarity=0.453 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.++|+++.+.|+ |||.|++.
T Consensus 153 ~~~l~~~~~~Lk---pgG~l~~~ 172 (246)
T 2vdv_E 153 NTLLSEYAYVLK---EGGVVYTI 172 (246)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHHcC---CCCEEEEE
Confidence 479999999999 99999984
No 185
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=63.43 E-value=3.2 Score=26.26 Aligned_cols=23 Identities=13% Similarity=0.414 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
+..+|+.+.+.|+ |||++++.-.
T Consensus 118 ~~~~l~~a~~~Lk---pGG~lv~k~~ 140 (191)
T 3dou_A 118 GQRVMEIAVRYLR---NGGNVLLKQF 140 (191)
T ss_dssp HHHHHHHHHHHEE---EEEEEEEEEE
T ss_pred HHHHHHHHHHHcc---CCCEEEEEEc
Confidence 5678999999999 9999987654
No 186
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=63.15 E-value=1.3 Score=30.77 Aligned_cols=30 Identities=10% Similarity=0.066 Sum_probs=24.5
Q ss_pred ccccCChHHHHHHHHHHHHhCCCCCCCcEEEEE
Q 040309 2 ILHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 2 vlHdw~d~~~~~iL~~~~~al~~~~pgg~lli~ 34 (100)
++|.|..+.....+.++++.|+ |||++++.
T Consensus 125 ~~~~~~~~~~~~~l~~~~~~Lk---pgG~li~~ 154 (348)
T 2y1w_A 125 MGYMLFNERMLESYLHAKKYLK---PSGNMFPT 154 (348)
T ss_dssp CBTTBTTTSHHHHHHHGGGGEE---EEEEEESC
T ss_pred chhcCChHHHHHHHHHHHhhcC---CCeEEEEe
Confidence 3566777778888999999999 89998854
No 187
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=63.15 E-value=5.5 Score=25.43 Aligned_cols=21 Identities=29% Similarity=0.502 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e 35 (100)
.++|+++++.|+ |||++++.-
T Consensus 133 ~~~l~~~~~~Lk---pgG~l~~~t 153 (213)
T 2fca_A 133 SHFLKKYEEVMG---KGGSIHFKT 153 (213)
T ss_dssp HHHHHHHHHHHT---TSCEEEEEE
T ss_pred HHHHHHHHHHcC---CCCEEEEEe
Confidence 578999999999 999998753
No 188
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=61.41 E-value=8.4 Score=24.69 Aligned_cols=31 Identities=13% Similarity=0.141 Sum_probs=23.4
Q ss_pred ccCce-ecCHHHHHHHHHHcCCceeEEEecCC
Q 040309 61 LFRGK-ERSVDDWKKLFLAAGFSHYKITPILG 91 (100)
Q Consensus 61 ~~~g~-~rt~~e~~~ll~~aGf~~~~v~~~~~ 91 (100)
+.||+ --.=+|++++|+++||+.++.+-..|
T Consensus 15 NVGG~nkv~MadLr~~l~~lGf~~V~TyI~SG 46 (183)
T 2hiy_A 15 NVGGKNKVVMAELRQELTNLGLEKVESYINSG 46 (183)
T ss_dssp SCC-CCCCCHHHHHHHHHHHTCEEEEEETTTT
T ss_pred ecCCCCcccHHHHHHHHHHcCCccceEEEecC
Confidence 45564 45799999999999999998764444
No 189
>3cxj_A Uncharacterized protein; PSI-II, structural genomics structure initiative; 2.80A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=59.73 E-value=6.5 Score=25.05 Aligned_cols=30 Identities=17% Similarity=0.097 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHcCCceeEEEecCCcceEEE
Q 040309 68 SVDDWKKLFLAAGFSHYKITPILGVRSLIE 97 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~~~~~~~vie 97 (100)
|.++.++||.+.||.+.++-+....+++.-
T Consensus 4 ~~~~I~~WL~eeG~~v~~~~~a~a~fH~~v 33 (165)
T 3cxj_A 4 SQEMIKKWLDEEGFLRMEVPDENARFHYVV 33 (165)
T ss_dssp HHHHHHHHHHHTTCEEEECCCTTEEEEEEE
T ss_pred cHHHHHHHHHHcCceEecCCCCCCceEEEE
Confidence 578999999999999987544333344433
No 190
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=59.47 E-value=4.5 Score=29.73 Aligned_cols=24 Identities=17% Similarity=0.308 Sum_probs=20.7
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
.+||+++.+.|+ |||+|+..-+.+
T Consensus 209 ~~iL~~a~~~Lk---pGG~LvysTCs~ 232 (464)
T 3m6w_A 209 KALLAQASRLLG---PGGVLVYSTCTF 232 (464)
T ss_dssp HHHHHHHHTTEE---EEEEEEEEESCC
T ss_pred HHHHHHHHHhcC---CCcEEEEEeccC
Confidence 789999999999 999999876654
No 191
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=59.44 E-value=12 Score=25.61 Aligned_cols=19 Identities=5% Similarity=0.256 Sum_probs=16.1
Q ss_pred HHHHHHHHHhCCCCCCCcEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVII 33 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli 33 (100)
.++|+.+++.|+ |||.+++
T Consensus 171 l~~L~~~~~~Lk---pGG~~v~ 189 (305)
T 2p41_A 171 LRVLNLVENWLS---NNTQFCV 189 (305)
T ss_dssp HHHHHHHHHHCC---TTCEEEE
T ss_pred HHHHHHHHHHhC---CCCEEEE
Confidence 368999999999 9997776
No 192
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=58.66 E-value=5.5 Score=28.27 Aligned_cols=26 Identities=8% Similarity=0.207 Sum_probs=22.5
Q ss_pred ChHHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 7 NDEESVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
..+...++++++++.|+ |||+++|+-
T Consensus 315 ~~~~~~~~l~~~~~~Lk---pGG~l~iv~ 340 (381)
T 3dmg_A 315 ILDVAQAFVNVAAARLR---PGGVFFLVS 340 (381)
T ss_dssp CCHHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcC---cCcEEEEEE
Confidence 35678899999999999 999999874
No 193
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=58.57 E-value=3.6 Score=29.44 Aligned_cols=25 Identities=12% Similarity=0.275 Sum_probs=21.9
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
.++|+++.+.|+ |||++++..+.+.
T Consensus 354 ~~~L~~a~~~Lk---pGG~lvystcs~~ 378 (429)
T 1sqg_A 354 SEILDAIWPHLK---TGGTLVYATCSVL 378 (429)
T ss_dssp HHHHHHHGGGEE---EEEEEEEEESCCC
T ss_pred HHHHHHHHHhcC---CCCEEEEEECCCC
Confidence 589999999999 9999999887654
No 194
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=58.21 E-value=3.6 Score=29.07 Aligned_cols=27 Identities=11% Similarity=0.358 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 6 WNDEESVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 6 w~d~~~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
..+....++++++++.|+ |||+++|+-
T Consensus 308 ~~~~~~~~~l~~~~~~Lk---pgG~l~iv~ 334 (375)
T 4dcm_A 308 LTDNVAWEMFHHARRCLK---INGELYIVA 334 (375)
T ss_dssp --CCHHHHHHHHHHHHEE---EEEEEEEEE
T ss_pred cCHHHHHHHHHHHHHhCC---CCcEEEEEE
Confidence 345566789999999999 999999964
No 195
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=57.24 E-value=8.1 Score=24.54 Aligned_cols=23 Identities=22% Similarity=0.476 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
.++++.+ +.|+ |||.|++.+...
T Consensus 151 ~~~~~~~-~~Lk---pgG~lv~~~~~~ 173 (221)
T 3u81_A 151 TLLLEKC-GLLR---KGTVLLADNVIV 173 (221)
T ss_dssp HHHHHHT-TCCC---TTCEEEESCCCC
T ss_pred HHHHHhc-cccC---CCeEEEEeCCCC
Confidence 4677777 8999 999888876654
No 196
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=56.49 E-value=1.9 Score=31.67 Aligned_cols=28 Identities=11% Similarity=0.048 Sum_probs=23.7
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEE
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVII 33 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli 33 (100)
+|.|.+++....+.++++.|+ |||++++
T Consensus 234 ~~~~~~e~~~~~l~~~~~~Lk---pgG~li~ 261 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLK---PSGNMFP 261 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEE---EEEEEES
T ss_pred hHhcCcHHHHHHHHHHHHhcC---CCCEEEE
Confidence 466777888889999999999 8999884
No 197
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=55.78 E-value=3.1 Score=27.56 Aligned_cols=22 Identities=14% Similarity=0.306 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEE
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~ 34 (100)
....+++.+.+.|+ |||+++++
T Consensus 148 ~~~~~l~~~~~~Lk---pgG~l~~~ 169 (260)
T 2ozv_A 148 LFEDWIRTASAIMV---SGGQLSLI 169 (260)
T ss_dssp CHHHHHHHHHHHEE---EEEEEEEE
T ss_pred CHHHHHHHHHHHcC---CCCEEEEE
Confidence 36789999999999 89999874
No 198
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=55.43 E-value=2.9 Score=21.95 Aligned_cols=19 Identities=32% Similarity=0.424 Sum_probs=16.0
Q ss_pred CHHHHHHHHHHcCCceeEE
Q 040309 68 SVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v 86 (100)
-..+|+.+|..||.+..++
T Consensus 34 ~pp~W~~ll~~sGIt~~e~ 52 (59)
T 1cee_B 34 LDPDLRSLFSRAGISEAQL 52 (59)
T ss_dssp CCHHHHHHHTTTTSCSSCC
T ss_pred CCHHHHHHHHHcCCCHHHH
Confidence 4789999999999887654
No 199
>2lnh_A N-WAsp, neural wiskott-aldrich syndrome protein; protein complex, signaling protein-protein binding complex; NMR {Homo sapiens}
Probab=55.02 E-value=3.5 Score=22.19 Aligned_cols=18 Identities=28% Similarity=0.309 Sum_probs=14.5
Q ss_pred CHHHHHHHHHHcCCceeE
Q 040309 68 SVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~ 85 (100)
-..||+.+|+.||.+..+
T Consensus 23 lp~eW~~ll~~sGIs~~~ 40 (65)
T 2lnh_A 23 LDPELKNLFDMCGISEAQ 40 (65)
T ss_dssp CCTTHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHcCCCHHH
Confidence 357999999999987544
No 200
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=53.92 E-value=3 Score=28.35 Aligned_cols=20 Identities=20% Similarity=0.376 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.++++++++.|+ |||.+++.
T Consensus 185 ~~~l~~~~~~Lk---pgG~lv~~ 204 (296)
T 1inl_A 185 EEFYQACYDALK---EDGVFSAE 204 (296)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHhcC---CCcEEEEE
Confidence 688999999999 89988875
No 201
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=53.67 E-value=18 Score=20.14 Aligned_cols=25 Identities=24% Similarity=0.428 Sum_probs=18.8
Q ss_pred ecCHHHHHHHHH----HcCCceeEEEecC
Q 040309 66 ERSVDDWKKLFL----AAGFSHYKITPIL 90 (100)
Q Consensus 66 ~rt~~e~~~ll~----~aGf~~~~v~~~~ 90 (100)
.++.+|-..+.+ ++||.+.+|.|..
T Consensus 53 A~sLdEAlE~AE~eYeeaGF~V~RVRPev 81 (84)
T 2lmc_A 53 AETLDEALELAEWQYVPAGFEVTRVRPCV 81 (84)
T ss_dssp CSSHHHHHHHHHHTTGGGTCEEEEEEEEC
T ss_pred cccHHHHHHHHHHHhhhccceEEEecccc
Confidence 357777666666 7899999998853
No 202
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=52.85 E-value=9.1 Score=24.47 Aligned_cols=22 Identities=23% Similarity=0.246 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.++|+++.+.|+ |||++++...
T Consensus 170 ~~~l~~~~~~L~---~gG~l~~~~~ 191 (248)
T 2yvl_A 170 WHYLEKVHKSLM---EGAPVGFLLP 191 (248)
T ss_dssp GGGHHHHHHHBC---TTCEEEEEES
T ss_pred HHHHHHHHHHcC---CCCEEEEEeC
Confidence 478899999999 9999999774
No 203
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=52.20 E-value=5.4 Score=27.21 Aligned_cols=21 Identities=19% Similarity=0.501 Sum_probs=18.0
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e 35 (100)
.++++.++++|+ |||.+++.-
T Consensus 178 ~~f~~~~~~~Lk---pgG~lv~~~ 198 (294)
T 3adn_A 178 SAFYEGCKRCLN---PGGIFVAQN 198 (294)
T ss_dssp HHHHHHHHHTEE---EEEEEEEEE
T ss_pred HHHHHHHHHhcC---CCCEEEEec
Confidence 679999999999 899888754
No 204
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=52.08 E-value=5.2 Score=26.17 Aligned_cols=20 Identities=30% Similarity=0.348 Sum_probs=17.7
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
..+|+++++.|+ |||++++.
T Consensus 148 ~~~l~~~~~~Lk---pGG~l~~~ 167 (235)
T 3ckk_A 148 PTLLAEYAYVLR---VGGLVYTI 167 (235)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHHCC---CCCEEEEE
Confidence 379999999999 99999876
No 205
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=50.95 E-value=7.4 Score=27.68 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
...+.|..+.+.|+ |||||.|+-+-.
T Consensus 252 ~L~~~L~~a~~~L~---~gGRl~VISFHS 277 (347)
T 3tka_A 252 EIEQALKSSLNVLA---PGGRLSIISFHS 277 (347)
T ss_dssp HHHHHHHHHHHHEE---EEEEEEEEESSH
T ss_pred HHHHHHHHHHHHhC---CCCEEEEEecCc
Confidence 45678899999999 999999998754
No 206
>3n1g_B Desert hedgehog protein; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence, fibronectins; 1.90A {Homo sapiens} SCOP: d.65.1.2 PDB: 3n1q_B
Probab=50.93 E-value=43 Score=21.31 Aligned_cols=80 Identities=14% Similarity=0.079 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCC-CCchhhhhhhhhhhhcccccCceecC-HHHHHHHHHHcCCceeE
Q 040309 8 DEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQS-QDKESMETQLCFDILMVSLFRGKERS-VDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 8 d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~-~~~~~~~~~~~~dl~ml~~~~g~~rt-~~e~~~ll~~aGf~~~~ 85 (100)
|..+...|..+...+....+|..|.|.+-.-.+.. ....+--.+...|+.+ .++..+ ...+.++..++||.-+
T Consensus 81 d~rl~d~L~~L~~~v~~~~~g~pi~V~SGYRsp~~Na~~SlH~~GrAaDI~~----~~~~~~k~~~La~~A~~~gfd~V- 155 (170)
T 3n1g_B 81 TERCKERVNALAIAVMNMWPGVRLRVTEGWDEDGHHAQDSLHYEGRALDITT----SDRDRNKYGLLARLAVEAGFDWV- 155 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHSTTCCEEEEESSCCSCCSCTTCGGGGTCEEEEEE----TTCCGGGHHHHHHHHHHTTCSEE-
T ss_pred CHHHHHHHHHHHHHHhcccCCCcEEEEecccCccccCCcCchheeEEEEEEe----CCccHHHHHHHHHHHHHCCCCEE-
Confidence 55678888888766642113678999887654432 2211111234556643 333332 2356677889999998
Q ss_pred EEecCCc
Q 040309 86 ITPILGV 92 (100)
Q Consensus 86 v~~~~~~ 92 (100)
.++-.++
T Consensus 156 ~Y~~~~f 162 (170)
T 3n1g_B 156 YYESRNH 162 (170)
T ss_dssp ECCCSSC
T ss_pred EeCCCCE
Confidence 6655444
No 207
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=50.55 E-value=7.7 Score=26.81 Aligned_cols=27 Identities=19% Similarity=0.449 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
...+.|..+.+.|+ |||||.|+-+..=
T Consensus 211 ~L~~~L~~a~~~L~---~gGrl~visfHSL 237 (285)
T 1wg8_A 211 ALKEFLEQAAEVLA---PGGRLVVIAFHSL 237 (285)
T ss_dssp HHHHHHHHHHHHEE---EEEEEEEEECSHH
T ss_pred HHHHHHHHHHHHhc---CCCEEEEEecCcH
Confidence 45678899999999 9999999987643
No 208
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=50.50 E-value=8.9 Score=23.62 Aligned_cols=19 Identities=21% Similarity=0.329 Sum_probs=17.4
Q ss_pred HHHHHHHHHhCCCCCCCcEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVII 33 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli 33 (100)
++++..++++|+ |||++--
T Consensus 78 r~li~~l~~aLk---pgG~L~g 96 (136)
T 2km1_A 78 KKLISVLADSLK---PNGSLIG 96 (136)
T ss_dssp HHHHHHHHTTCC---TTCCEEC
T ss_pred HHHHHHHHHHhC---CCCEEEe
Confidence 789999999999 9999877
No 209
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=50.31 E-value=26 Score=18.24 Aligned_cols=20 Identities=25% Similarity=0.365 Sum_probs=16.7
Q ss_pred cCHHHHHHHHHHcCCceeEE
Q 040309 67 RSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~~v 86 (100)
.+.+|-+++|+++||+...+
T Consensus 16 ~~~~~A~~~L~~~Gl~~~~~ 35 (71)
T 3ouv_A 16 QTVDVAQKNMNVYGFTKFSQ 35 (71)
T ss_dssp CBHHHHHHHHHHTTCCCEEE
T ss_pred CCHHHHHHHHHHCCCeEEEE
Confidence 47888999999999987654
No 210
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=50.24 E-value=5.9 Score=25.58 Aligned_cols=20 Identities=15% Similarity=0.222 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEe
Q 040309 13 KLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 13 ~iL~~~~~al~~~~pgg~lli~e 35 (100)
.+++.+++.|+ |||++++.-
T Consensus 131 ~~l~~~~r~Lk---pGG~l~i~t 150 (218)
T 3dxy_A 131 PFAELVKSKLQ---LGGVFHMAT 150 (218)
T ss_dssp HHHHHHHHHEE---EEEEEEEEE
T ss_pred HHHHHHHHHcC---CCcEEEEEe
Confidence 59999999999 999988754
No 211
>3i31_A Heat resistant RNA dependent ATPase; RNA helicase, RNA recognition motif, ATP-binding, helicase, nucleotide-binding; 1.80A {Thermus thermophilus}
Probab=49.21 E-value=34 Score=19.36 Aligned_cols=27 Identities=19% Similarity=0.209 Sum_probs=22.6
Q ss_pred CceecCHHHHHHHHHHcCCceeEEEec
Q 040309 63 RGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 63 ~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
.|.--|.....++|++||+.+-+|...
T Consensus 19 ~G~rLS~~R~VAlLk~aG~~iGkI~~~ 45 (88)
T 3i31_A 19 TGPRLSLPRLVALLKGQGLEVGKVAEA 45 (88)
T ss_dssp ECTTCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred ecccccHHHHHHHHHHcccccccEEec
Confidence 577779999999999999977777643
No 212
>2eg2_A Nitrogen regulatory protein P-II; structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: ATP; 1.72A {Aquifex aeolicus} PDB: 2eg1_A* 2z0g_A 2pii_A 1pil_A
Probab=48.94 E-value=22 Score=20.51 Aligned_cols=30 Identities=23% Similarity=0.397 Sum_probs=20.8
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.++.....+ +|+++|.+.
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 96 (112)
T 2eg2_A 66 RDEDVEKVVETIVKTAQTGRVGDGKIFIIPV 96 (112)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 567777888888777663223 588888874
No 213
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=48.94 E-value=8 Score=24.64 Aligned_cols=24 Identities=21% Similarity=0.259 Sum_probs=20.3
Q ss_pred cCceecCHHHHHHHHHHcCCceeE
Q 040309 62 FRGKERSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 62 ~~g~~rt~~e~~~ll~~aGf~~~~ 85 (100)
..-.-+|.+|+.+.|++.||.+.+
T Consensus 30 ~~~~I~tQeEL~~~L~~~Gi~vTQ 53 (170)
T 3lap_A 30 SSAQVRSQNELAALLAAEGIEVTQ 53 (170)
T ss_dssp HHSCCCSHHHHHHHHHHTTCCCCH
T ss_pred HhCCCCCHHHHHHHHHHcCCCcCc
Confidence 456778999999999999998754
No 214
>3hjh_A Transcription-repair-coupling factor; MFD, mutation frequency decline, ATP-binding, DNA DAMA repair, DNA-binding, helicase, hydrolase; 1.95A {Escherichia coli} PDB: 2b2n_A* 4dfc_A
Probab=48.07 E-value=12 Score=27.63 Aligned_cols=41 Identities=22% Similarity=0.384 Sum_probs=32.7
Q ss_pred cccCceecCHHHHHHHHHHcCCceeEEEecCCcc----eEEEEeC
Q 040309 60 SLFRGKERSVDDWKKLFLAAGFSHYKITPILGVR----SLIEAYP 100 (100)
Q Consensus 60 ~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~~~~----~vie~~p 100 (100)
...-|.+...+++.+.|.+.||+.+..+...|-+ +||+++|
T Consensus 129 ~l~~G~~~~~~~l~~~L~~~GY~r~~~V~~~GefavRG~IiDIfp 173 (483)
T 3hjh_A 129 VMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFP 173 (483)
T ss_dssp EEETTCCCCHHHHHHHHHHTTCEECSSCCSTTEEEEETTEEEECC
T ss_pred EEECCCCcCHHHHHHHHHHcCCeeccccCCceEEEEeCCceEEcC
Confidence 3446899999999999999999998877666643 5777765
No 215
>2g7j_A Putative cytoplasmic protein; STR72, autostructure, structural genomics, PSI, protein STRU initiative; NMR {Salmonella typhimurium} SCOP: d.198.5.1
Probab=47.79 E-value=20 Score=21.28 Aligned_cols=20 Identities=25% Similarity=0.373 Sum_probs=17.3
Q ss_pred CHHHHHHHHHHcCCceeEEE
Q 040309 68 SVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~ 87 (100)
.+.|..+.|+.+||+..-|.
T Consensus 4 RPDEVArVLEk~GF~~D~vt 23 (124)
T 2g7j_A 4 RPDEVARVLEKAGFTVDVVT 23 (124)
T ss_dssp CHHHHHHHHHHTTCEEEEEE
T ss_pred ChHHHHHHHHHcCceEEEee
Confidence 46899999999999988774
No 216
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=47.22 E-value=6.9 Score=25.51 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=18.2
Q ss_pred HHHHHHHhCCCCCCCcEEEEEeee
Q 040309 14 LLKKCKEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 14 iL~~~~~al~~~~pgg~lli~e~v 37 (100)
.++++++.|+ |||++++....
T Consensus 160 ~l~~~~~~L~---pgG~l~~~~~~ 180 (269)
T 1p91_A 160 KAEELARVVK---PGGWVITATPG 180 (269)
T ss_dssp CHHHHHHHEE---EEEEEEEEEEC
T ss_pred hHHHHHHhcC---CCcEEEEEEcC
Confidence 5889999999 99999998754
No 217
>2gw8_A PII signal transduction protein; transcriptional regulation, neisse structural genomics, oxford protein production facility; 1.85A {Neisseria meningitidis}
Probab=47.10 E-value=19 Score=20.93 Aligned_cols=30 Identities=17% Similarity=0.293 Sum_probs=20.4
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.+++....+ +|+++|.+.
T Consensus 68 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 2gw8_A 68 ADDAVERAIDVIVEVARSGKIGDGKIFVLPV 98 (114)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 466777777777776663223 489988874
No 218
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=47.03 E-value=7.4 Score=21.68 Aligned_cols=20 Identities=30% Similarity=0.454 Sum_probs=16.0
Q ss_pred eecCHHHHHHHHHHcCCcee
Q 040309 65 KERSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~ 84 (100)
.|....|-..||+.|||...
T Consensus 17 ~E~eA~eAC~WLRaaGFPQY 36 (81)
T 2h80_A 17 QEIEAKEACDWLRAAGFPQY 36 (81)
T ss_dssp HHHHHHHHHHHHHHTTCHHH
T ss_pred hHHHHHHHHHHHHHcCCcHH
Confidence 35667788999999999754
No 219
>1f3m_A Serine/threonine-protein kinase PAK-alpha; kinase domain, autoinhibitory fragment, homodimer, transferase; 2.30A {Homo sapiens} SCOP: j.66.1.1 PDB: 1e0a_B* 1ees_B
Probab=46.54 E-value=10 Score=21.11 Aligned_cols=21 Identities=10% Similarity=0.363 Sum_probs=16.4
Q ss_pred ecCHHHHHHHHHHcCCceeEE
Q 040309 66 ERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~~~v 86 (100)
.--..||+.+|..+|.+..++
T Consensus 28 ~GlP~eW~~ll~~sGIs~~e~ 48 (80)
T 1f3m_A 28 TGMPEQWARLLQTSNITKSEQ 48 (80)
T ss_dssp ESCCHHHHHHHHTSCCCHHHH
T ss_pred CCCCHHHHHHHHHcCCCHHHH
Confidence 334789999999999876544
No 220
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=46.35 E-value=4.9 Score=25.06 Aligned_cols=21 Identities=14% Similarity=0.284 Sum_probs=18.7
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEE
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~ 34 (100)
..++++++++.|+ |||++++.
T Consensus 144 ~~~~l~~~~~~L~---~gG~l~~~ 164 (207)
T 1jsx_A 144 LNDMVSWCHHLPG---EQGRFYAL 164 (207)
T ss_dssp HHHHHHHHTTSEE---EEEEEEEE
T ss_pred HHHHHHHHHHhcC---CCcEEEEE
Confidence 4689999999999 99999987
No 221
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=46.22 E-value=13 Score=22.36 Aligned_cols=29 Identities=24% Similarity=0.425 Sum_probs=24.4
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
+|-|.+++.-++++++.+. . ..|.++-+|
T Consensus 67 l~~WKp~eVdkm~~k~~q~-~---~dGl~iYCD 95 (126)
T 2rbg_A 67 LFLWKKNEVDIFLKNLEKS-E---VDGLLVYCD 95 (126)
T ss_dssp EEEECGGGHHHHHHHHTTC-C---CCEEEEEEC
T ss_pred EEEeCHHHHHHHHHHHHHh-C---CCceEEEeC
Confidence 6789999999999999876 4 688887776
No 222
>2jso_A Polymyxin resistance protein PMRD; antibiotic resistance, transcription, signaling Pro; NMR {Escherichia coli}
Probab=46.19 E-value=16 Score=20.66 Aligned_cols=19 Identities=26% Similarity=0.550 Sum_probs=16.7
Q ss_pred cCceecCHHHHHHHHHHcC
Q 040309 62 FRGKERSVDDWKKLFLAAG 80 (100)
Q Consensus 62 ~~g~~rt~~e~~~ll~~aG 80 (100)
...++|+.+||.++.+.+|
T Consensus 67 i~As~Ys~~eW~~~~~~~~ 85 (88)
T 2jso_A 67 LSASSYSPDEWERQCKVAG 85 (88)
T ss_dssp EEEEECCHHHHHHHHHHTT
T ss_pred EeccccCHHHHHHHHhhcc
Confidence 4678999999999999877
No 223
>3ncq_A Nitrogen regulatory protein P-II (GLNB-2); PII signaling, nucleotide binding, GLNK, signaling Pro; HET: ATP; 1.24A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ncp_A* 3ncr_A*
Probab=45.42 E-value=27 Score=20.70 Aligned_cols=30 Identities=17% Similarity=0.288 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++-+.++.+.-.+ +|+++|.+.
T Consensus 66 ~de~ve~vv~~I~~~a~TG~~GDGkIFV~~V 96 (119)
T 3ncq_A 66 KDDAVEEVIGLIVNSAFTGSPGDGKIFIIPV 96 (119)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCCEEEEEEh
Confidence 566777777777776663113 499999874
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=44.78 E-value=6.7 Score=26.24 Aligned_cols=27 Identities=15% Similarity=0.167 Sum_probs=20.3
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEE
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~ 34 (100)
+.|-+|.. .++++++++|+ |||.+++.
T Consensus 144 i~d~~dp~--~~~~~~~~~L~---pgG~lv~~ 170 (262)
T 2cmg_A 144 FCLQEPDI--HRIDGLKRMLK---EDGVFISV 170 (262)
T ss_dssp EESSCCCH--HHHHHHHTTEE---EEEEEEEE
T ss_pred EECCCChH--HHHHHHHHhcC---CCcEEEEE
Confidence 34544443 48999999999 89998885
No 225
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=44.04 E-value=16 Score=24.80 Aligned_cols=14 Identities=21% Similarity=0.515 Sum_probs=11.2
Q ss_pred CCcEEEEEeeecCC
Q 040309 27 EGGKVIIIDMAIEN 40 (100)
Q Consensus 27 pgg~lli~e~v~~~ 40 (100)
|||.-+|+|+..+.
T Consensus 92 PgGvaiiVe~lTDN 105 (249)
T 1lfp_A 92 PGGVAVMVLATTDN 105 (249)
T ss_dssp TTTEEEEEEEEESC
T ss_pred CCceEEEEEEecCC
Confidence 78888888888764
No 226
>1ej5_A WAsp, wiskott-aldrich syndrome protein; alpha helix, beta-hairpin turn, blood clotting; NMR {Homo sapiens} SCOP: a.68.1.1 PDB: 1t84_A* 2k42_A
Probab=43.98 E-value=13 Score=21.89 Aligned_cols=18 Identities=33% Similarity=0.396 Sum_probs=14.7
Q ss_pred CHHHHHHHHHHcCCceeE
Q 040309 68 SVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~ 85 (100)
-..+|+.+|+.+|.+..+
T Consensus 22 lppeWk~LL~~aGITe~e 39 (107)
T 1ej5_A 22 LDPDLRSLFSRAGISEAQ 39 (107)
T ss_dssp CCHHHHHHHHHTTCCHHH
T ss_pred CCHHHHHHHHHcCCCHHH
Confidence 468999999999987544
No 227
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=43.85 E-value=5.9 Score=26.04 Aligned_cols=22 Identities=14% Similarity=0.295 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.++|+++.++|+ |||++++...
T Consensus 183 ~~~l~~~~~~L~---pgG~l~~~~~ 204 (280)
T 1i9g_A 183 WEVLDAVSRLLV---AGGVLMVYVA 204 (280)
T ss_dssp GGGHHHHHHHEE---EEEEEEEEES
T ss_pred HHHHHHHHHhCC---CCCEEEEEeC
Confidence 378999999999 9999999774
No 228
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=43.38 E-value=31 Score=18.58 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=32.1
Q ss_pred cEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEecCC
Q 040309 29 GKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPILG 91 (100)
Q Consensus 29 g~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~~ 91 (100)
||+..++.++|+.....+ + ..+.... +...=..+|-.++++.+-+.-| +++.|.+..+
T Consensus 1 ~r~F~~~~~ip~~~~~~~--~-~~~~~~~-~t~~VPy~rms~emQrI~r~GG-kIvSItp~~~ 58 (67)
T 1b33_N 1 GRLFKITACVPSQTRIRT--Q-RELQNTY-FTKLVPYENWFREQQRIQKMGG-KIVKVELATG 58 (67)
T ss_dssp CCEEEEEEECCCSSCCCC--S-CCHHHHE-EEEEEEHHHHHHHHHHHHHTTC-EEEEEEETTC
T ss_pred CceEEEEEEeCCcccccc--c-cccceEE-EEEEecHHHHhHHHHHHHHcCC-eEEEEEECCC
Confidence 688999999887654321 1 1111111 1000123455566666666655 9999988753
No 229
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=43.19 E-value=20 Score=23.06 Aligned_cols=30 Identities=10% Similarity=0.357 Sum_probs=22.5
Q ss_pred ccCC-hHHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 4 HNWN-DEESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 4 Hdw~-d~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.||. .....+|.+++.+.++ +|+.||.+|.
T Consensus 127 ~Dw~~~~~~~~i~~~v~~~~~---~g~IiL~Hd~ 157 (216)
T 2c71_A 127 NDWIPSTTAEQRAAAVINGVR---DGTIILLHDV 157 (216)
T ss_dssp STTCTTSCHHHHHHHHHHHCC---TTBEEEEESC
T ss_pred ccccCCCCHHHHHHHHHhcCC---CCcEEEEECC
Confidence 3776 5556788888888888 7888877764
No 230
>4aff_A Nitrogen regulatory protein P-II; signaling protein; HET: ATP FLC; 1.05A {Synechococcus elongatus} SCOP: d.58.5.1 PDB: 2xun_A* 2xul_A* 2xzw_A* 2xbp_A* 2v5h_G* 2jj4_D* 2xg8_A 1qy7_A 3n5b_A* 1ul3_A
Probab=42.95 E-value=29 Score=20.40 Aligned_cols=30 Identities=17% Similarity=0.334 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.++.+.-.+ +|+++|.+.
T Consensus 66 ~d~~ve~vv~~I~~~a~Tg~~GDGkIFV~~V 96 (116)
T 4aff_A 66 EDAQVDTVIDKIVAAARTGENGDGKIFVSPV 96 (116)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCEEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 567777777777777663113 489999873
No 231
>4f3q_A Transcriptional regulatory protein CBU_1566; YEBC family; 2.15A {Coxiella burnetii}
Probab=42.73 E-value=13 Score=25.13 Aligned_cols=20 Identities=10% Similarity=0.127 Sum_probs=13.4
Q ss_pred cCHHHHHHHHHHcCCceeEE
Q 040309 67 RSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~~v 86 (100)
.+.++....+-+||-..+..
T Consensus 149 ~~~d~~~e~aieaGAeDv~~ 168 (247)
T 4f3q_A 149 SDEEKIMEIALEVGAEDVTT 168 (247)
T ss_dssp CCHHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHhCCCceeee
Confidence 46777766666778776553
No 232
>2j9c_A GLNK1, hypothetical nitrogen regulatory PII-like protein MJ0059; EM single particle, nitrogen metabolism, signalling, transcription; HET: ATP; 1.30A {Methanococcus jannaschii} PDB: 2j9d_A* 2j9e_A* 2j9d_E*
Probab=42.60 E-value=22 Score=20.81 Aligned_cols=30 Identities=17% Similarity=0.351 Sum_probs=20.2
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.+++....+ +|+++|.+.
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (119)
T 2j9c_A 68 KEEDVDNVIDIICENARTGNPGDGKIFVIPV 98 (119)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 466777777777776663123 488888874
No 233
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=42.43 E-value=9.7 Score=25.58 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.+++++++++|+ |||.+++.
T Consensus 172 ~~~l~~~~~~L~---pgG~lv~~ 191 (283)
T 2i7c_A 172 QNFYEKIYNALK---PNGYCVAQ 191 (283)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHhcC---CCcEEEEE
Confidence 689999999999 89998876
No 234
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=42.35 E-value=27 Score=24.06 Aligned_cols=24 Identities=13% Similarity=0.297 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
+..++++++.+.|+ |||.+++...
T Consensus 250 ~~~~ll~~~~~~Lk---pgG~lli~~~ 273 (332)
T 2igt_A 250 HLPLMLDICREILS---PKALGLVLTA 273 (332)
T ss_dssp HHHHHHHHHHHTBC---TTCCEEEEEE
T ss_pred HHHHHHHHHHHhcC---cCcEEEEEEC
Confidence 45789999999999 8998766543
No 235
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=42.29 E-value=9.6 Score=26.05 Aligned_cols=22 Identities=18% Similarity=0.330 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
..++++++++.|+ |||.+++.-
T Consensus 174 ~~~~l~~~~~~Lk---pgG~lv~~~ 195 (314)
T 1uir_A 174 TVEFYRLVKAHLN---PGGVMGMQT 195 (314)
T ss_dssp SHHHHHHHHHTEE---EEEEEEEEE
T ss_pred HHHHHHHHHHhcC---CCcEEEEEc
Confidence 3689999999999 999998864
No 236
>3mhy_A PII-like protein PZ; PII protein, alpha-beta protein, homotrimer, signaling prote; HET: PG6 ATP AKG MES; 1.40A {Azospirillum brasilense} SCOP: d.58.5.1 PDB: 3o5t_B*
Probab=42.21 E-value=27 Score=20.30 Aligned_cols=30 Identities=17% Similarity=0.433 Sum_probs=18.9
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.++.+.-.+ +|+++|.+.
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkIfV~~v 96 (112)
T 3mhy_A 66 SDDQYEQVVEAIQKAANTGRIGDGKIFVLDI 96 (112)
T ss_dssp CTTTHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred chHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 456666677766666552112 489999873
No 237
>3t9z_A GLNK3, nitrogen regulatory protein P-II (GLNB-3); PII-family, AMT3, signaling protein; HET: FLC; 1.82A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ta0_A* 3ta1_A* 3ta2_A* 3o8w_A
Probab=42.10 E-value=32 Score=20.29 Aligned_cols=30 Identities=10% Similarity=0.317 Sum_probs=20.0
Q ss_pred ChHHHHHHHHHHHHhCCCCC-CCcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKD-EGGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~-pgg~lli~e~ 36 (100)
+|+++.++++-+.++.+.-. -+|+++|.+.
T Consensus 66 ~de~ve~Vv~~I~~~a~TG~~GDGkIFV~~V 96 (118)
T 3t9z_A 66 SDDAVDEVVEAIVSSARTGKFGDGRIFVIPV 96 (118)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCeEEEEEEh
Confidence 56677777777777665311 2589999873
No 238
>2o66_A PII protein; regulation of nitrogen and carbon metabolism, biosynthetic protein; HET: FLC; 1.90A {Arabidopsis thaliana} PDB: 2o67_A 2rd5_C*
Probab=41.84 E-value=24 Score=21.36 Aligned_cols=30 Identities=10% Similarity=0.322 Sum_probs=21.6
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.++.....+ +|+++|.+.
T Consensus 79 ~de~ve~Vv~~I~~~~~tg~~GdGkIFV~pV 109 (135)
T 2o66_A 79 KKDQVESVINTIIEGARTGEIGDGKIFVLPV 109 (135)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCEEEEEEEh
Confidence 467788888888877764223 489999874
No 239
>1kon_A Protein YEBC, YEBC; alpha/beta, two-domains, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 2.20A {Escherichia coli} SCOP: e.39.1.1
Probab=41.51 E-value=16 Score=24.81 Aligned_cols=14 Identities=36% Similarity=0.684 Sum_probs=11.7
Q ss_pred CCcEEEEEeeecCC
Q 040309 27 EGGKVIIIDMAIEN 40 (100)
Q Consensus 27 pgg~lli~e~v~~~ 40 (100)
|||.-+|+|+..+.
T Consensus 95 PgGvaiiVe~lTDN 108 (249)
T 1kon_A 95 PGGTAIMIECLSDN 108 (249)
T ss_dssp TTTEEEEEEEEESC
T ss_pred CCceEEEEEEecCC
Confidence 78999999988765
No 240
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=41.46 E-value=10 Score=25.39 Aligned_cols=20 Identities=10% Similarity=0.170 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.++++++++.|+ |||.+++.
T Consensus 173 ~~~l~~~~~~L~---pgG~lv~~ 192 (281)
T 1mjf_A 173 EEFYRYVYDALN---NPGIYVTQ 192 (281)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHhcC---CCcEEEEE
Confidence 688999999999 89988876
No 241
>1x8d_A Hypothetical protein YIIL; mutarotase, L-rhamnose, biosynthetic protein; HET: RNS; 1.80A {Escherichia coli} SCOP: d.58.4.21
Probab=39.90 E-value=43 Score=19.32 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=24.3
Q ss_pred HHHHHHHHHHcCCceeEEEecCC---cceEEEE
Q 040309 69 VDDWKKLFLAAGFSHYKITPILG---VRSLIEA 98 (100)
Q Consensus 69 ~~e~~~ll~~aGf~~~~v~~~~~---~~~vie~ 98 (100)
..|..+.|++||.+..+|+..+. .++++|.
T Consensus 26 WPEv~~~L~~aGi~~ysIfl~~~~~~LF~~~E~ 58 (104)
T 1x8d_A 26 WPELEAVLKSHGAHNYAIYLDKARNLLFAMVEI 58 (104)
T ss_dssp CHHHHHHHHHTTEEEEEEEEETTTTEEEEEEEE
T ss_pred CHHHHHHHHHcCCeEEEEEEECCCCeEEEEEEE
Confidence 45788899999999999987752 5778875
No 242
>3k7i_B IHH, HHG-2, indian hedgehog protein; alpha+beta sandwich, autocatalytic cleavage, cell membrane, developmental protein, disease mutation; 1.44A {Homo sapiens} PDB: 3k7g_B 3k7j_B 3k7h_B 3n1f_A 3n1m_B 3n1o_A 3n1p_B 3m1n_A 3mxw_A 3ho5_H 1vhh_A 3d1m_A 3n1r_A 2wg4_A 2wfx_A 2wfq_A 2wfr_A 2wg3_A*
Probab=39.86 E-value=75 Score=20.53 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCc-hhhhhhhhhhhhcccccCceecC-HHHHHHHHHHcCCceeEEEe
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDK-ESMETQLCFDILMVSLFRGKERS-VDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~-~~~~~~~~~dl~ml~~~~g~~rt-~~e~~~ll~~aGf~~~~v~~ 88 (100)
|.+-|..+...+.+.-||.+|-|.|..-++..... .+--.+...|+. +.-+.++ ...+.+|..+|||.-+- +.
T Consensus 92 c~~kL~~La~~V~nqwpGvkLRVtegwde~~hh~~~SLHyEGRAvDIt----tsdrd~~k~g~LarLAveAGFDwV~-Y~ 166 (187)
T 3k7i_B 92 CKDRLNSLAISVMNQWPGVKLRVTKGWDEDGHHSEESLHYEGRAVDIT----TSDRDRNKYGLLARLAVEAGFDWVY-YE 166 (187)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEECCCSSCCSCTTCGGGGTCEEEEE----ETTCCGGGHHHHHHHHHHTTCSEEE-EE
T ss_pred HHHHHHHHHHHHHHhcCCceEEEeecccCCCCCCcccccccceeeEEE----ecccchhHHHHHHHHHHHcCCCEEE-ec
Confidence 55555555544322225899999998876643221 111123456664 2323343 55778888899999883 44
Q ss_pred cCC
Q 040309 89 ILG 91 (100)
Q Consensus 89 ~~~ 91 (100)
..+
T Consensus 167 sr~ 169 (187)
T 3k7i_B 167 SKA 169 (187)
T ss_dssp ETT
T ss_pred cCC
Confidence 433
No 243
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=39.81 E-value=11 Score=25.89 Aligned_cols=26 Identities=27% Similarity=0.634 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~v 37 (100)
+...+.|..+...|+ |||||.|+-+.
T Consensus 222 ~~l~~~l~~~~~~l~---~ggr~~visfh 247 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLN---PGGRIVVISFH 247 (301)
T ss_dssp HHHHHHHHHGGGGEE---EEEEEEEEESS
T ss_pred HHHHHHHHHHHHhhC---CCCEEEEEecC
Confidence 345778888899999 99999999844
No 244
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=38.74 E-value=13 Score=23.94 Aligned_cols=22 Identities=14% Similarity=0.135 Sum_probs=19.5
Q ss_pred cCceecCHHHHHHHHHHcCCce
Q 040309 62 FRGKERSVDDWKKLFLAAGFSH 83 (100)
Q Consensus 62 ~~g~~rt~~e~~~ll~~aGf~~ 83 (100)
..-.-+|.+|+.+.|++.||.+
T Consensus 43 ~~~~I~TQeEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 43 KEERFGSQGEIVEALKQEGFEN 64 (180)
T ss_dssp HHTCCCSHHHHHHHHHHTTCTT
T ss_pred hhCCcCCHHHHHHHHHHCCCcc
Confidence 4567789999999999999998
No 245
>1ny8_A Protein YRBA; structure, autoassign, autostructure, NESG, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: d.52.6.1
Probab=38.71 E-value=21 Score=20.59 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=15.2
Q ss_pred eecCHHHHHHHHHHcCCc
Q 040309 65 KERSVDDWKKLFLAAGFS 82 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~ 82 (100)
+.+|++||.+.-...||-
T Consensus 73 ~t~TP~Ew~~~~~~~~~~ 90 (97)
T 1ny8_A 73 KAYTPAEWARDRKLNGFL 90 (97)
T ss_dssp EECCHHHHHHHHHTTSSS
T ss_pred EecChHHHHhhhhhcchh
Confidence 789999999887777874
No 246
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=38.55 E-value=37 Score=23.23 Aligned_cols=21 Identities=24% Similarity=0.583 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e 35 (100)
.++++.+.+.|+ |||+++++-
T Consensus 297 ~~~~~~~~~~Lk---pgG~l~i~t 317 (354)
T 3tma_A 297 WDFLRGALALLP---PGGRVALLT 317 (354)
T ss_dssp HHHHHHHHHTSC---TTCEEEEEE
T ss_pred HHHHHHHHHhcC---CCcEEEEEe
Confidence 678999999999 899999863
No 247
>3l7p_A Putative nitrogen regulatory protein PII; SMU_1 transcription, transcription regulation; 2.00A {Streptococcus mutans} SCOP: d.58.5.1
Probab=38.25 E-value=35 Score=20.00 Aligned_cols=30 Identities=13% Similarity=0.368 Sum_probs=19.2
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.+++..+.++.+.-.+ +|+++|.+.
T Consensus 69 ~d~~ve~vv~~I~~~a~tg~~GDGkIFV~~v 99 (115)
T 3l7p_A 69 HDAAVEEMITTISQAVKTGEVGDGKIFVSPV 99 (115)
T ss_dssp CGGGHHHHHHHHHHHHCCC----CEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCcEEEEEEh
Confidence 567777777777777663112 489998873
No 248
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=38.14 E-value=12 Score=25.99 Aligned_cols=22 Identities=18% Similarity=0.437 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.+++++|++.|+ |||.+++.-.
T Consensus 180 ~efl~~~~r~Lk---pgGvlv~~~~ 201 (317)
T 3gjy_A 180 VEFFEHCHRGLA---PGGLYVANCG 201 (317)
T ss_dssp HHHHHHHHHHEE---EEEEEEEEEE
T ss_pred HHHHHHHHHhcC---CCcEEEEEec
Confidence 689999999999 8998877653
No 249
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=38.14 E-value=9.8 Score=26.93 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=20.6
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCC
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIEN 40 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~ 40 (100)
.+||+++.+.++ |||+|+=.=+-+..
T Consensus 264 ~~iL~~a~~~lk---pGG~LVYsTCSl~~ 289 (359)
T 4fzv_A 264 VQLLAAGLLATK---PGGHVVYSTCSLSH 289 (359)
T ss_dssp HHHHHHHHHTEE---EEEEEEEEESCCCT
T ss_pred HHHHHHHHhcCC---CCcEEEEEeCCCch
Confidence 579999999999 89988766665543
No 250
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=37.91 E-value=24 Score=26.86 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=33.7
Q ss_pred cccccCceecCHHHHHHHHHHcCCceeEEEecCCcc----eEEEEeC
Q 040309 58 MVSLFRGKERSVDDWKKLFLAAGFSHYKITPILGVR----SLIEAYP 100 (100)
Q Consensus 58 ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~~~~----~vie~~p 100 (100)
.+...-|.+.+.+++.+.|.+.||+.+..+...|-+ +||+++|
T Consensus 158 ~~~l~~G~~~~~~~l~~~L~~~GY~r~~~V~~~GefavRG~iiDIfp 204 (661)
T 2d7d_A 158 VVSLRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFP 204 (661)
T ss_dssp CEEEETTCBCCHHHHHHHHHHTTCEECSSSCCTTEEEEETTEEEEEC
T ss_pred cEEEeCCCEeCHHHHHHHHHHcCCeeCCcCCCCceEEEeCceeEEeC
Confidence 334456899999999999999999998877666643 4777776
No 251
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=37.45 E-value=47 Score=18.00 Aligned_cols=27 Identities=4% Similarity=-0.284 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHcCCceeEEEecCCcce
Q 040309 68 SVDDWKKLFLAAGFSHYKITPILGVRS 94 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~~~~~~~ 94 (100)
+.+++.+|+++.|+++......++.+.
T Consensus 49 a~~di~~~~~~~G~~~~~~~~~~~~~~ 75 (82)
T 3lvj_C 49 TTRDIPGFCTFMEHELVAKETDGLPYR 75 (82)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSSSEE
T ss_pred HHHHHHHHHHHCCCEEEEEEecCCEEE
Confidence 456888999999999988754444443
No 252
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1
Probab=37.30 E-value=16 Score=24.64 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=17.0
Q ss_pred ccCceecCHHHHHHHHHHcC-Cce
Q 040309 61 LFRGKERSVDDWKKLFLAAG-FSH 83 (100)
Q Consensus 61 ~~~g~~rt~~e~~~ll~~aG-f~~ 83 (100)
++..+.||..+.+..|.+.| -.+
T Consensus 98 lTDN~nRt~~~vR~~f~K~g~G~l 121 (240)
T 1mw7_A 98 MTDNPTRTIANLKSYFNKTQGASI 121 (240)
T ss_dssp EESCHHHHHHHHHHHHTTSTTCEE
T ss_pred ecCCHHHHHHHHHHHHhhcCCeee
Confidence 34567788888888888887 444
No 253
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=36.68 E-value=12 Score=25.99 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEE
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~ 34 (100)
..++++++++.|+ |||.+++.
T Consensus 214 ~~~~l~~~~~~Lk---pgG~lv~~ 234 (334)
T 1xj5_A 214 EKPFFQSVARALR---PGGVVCTQ 234 (334)
T ss_dssp SHHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHHhcC---CCcEEEEe
Confidence 3789999999999 89988875
No 254
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=36.65 E-value=30 Score=18.87 Aligned_cols=18 Identities=17% Similarity=0.287 Sum_probs=15.6
Q ss_pred cCHHHHHHHHHHcCCcee
Q 040309 67 RSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~ 84 (100)
-+.+++.+-|+++||+++
T Consensus 61 id~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 61 TPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHcCCEee
Confidence 477889999999999885
No 255
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=36.49 E-value=13 Score=24.92 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=17.6
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.+++++++++|+ |||.+++.
T Consensus 169 ~~~~~~~~~~L~---pgG~lv~~ 188 (275)
T 1iy9_A 169 KGFYAGIAKALK---EDGIFVAQ 188 (275)
T ss_dssp THHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHhcC---CCcEEEEE
Confidence 579999999999 89988775
No 256
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=36.31 E-value=12 Score=25.67 Aligned_cols=20 Identities=15% Similarity=0.215 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.++++++++.|+ |||.+++.
T Consensus 210 ~~~l~~~~~~Lk---pgG~lv~~ 229 (321)
T 2pt6_A 210 QNFYEKIYNALK---PNGYCVAQ 229 (321)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHhcC---CCcEEEEE
Confidence 689999999999 89988875
No 257
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=36.28 E-value=11 Score=26.01 Aligned_cols=21 Identities=14% Similarity=0.173 Sum_probs=16.9
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e 35 (100)
.++++++++.|+ |||.+++..
T Consensus 202 ~~~l~~~~~~Lk---pgG~lv~~~ 222 (314)
T 2b2c_A 202 QSYYELLRDALK---EDGILSSQG 222 (314)
T ss_dssp --HHHHHHHHEE---EEEEEEEEC
T ss_pred HHHHHHHHhhcC---CCeEEEEEC
Confidence 689999999999 899888754
No 258
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=36.21 E-value=45 Score=21.99 Aligned_cols=33 Identities=15% Similarity=0.094 Sum_probs=24.9
Q ss_pred cCHHHHHHHHHHcCCceeEEEec---CCcceEEEEe
Q 040309 67 RSVDDWKKLFLAAGFSHYKITPI---LGVRSLIEAY 99 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~~v~~~---~~~~~vie~~ 99 (100)
...++.++||.+.||.+.+..-+ +-++.+|.+.
T Consensus 127 ~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 127 NREDDLRKWLAANDFEIVAEDILTENDKRYEILVVK 162 (230)
T ss_dssp SCHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEE
T ss_pred CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 35889999999999999876432 3467788765
No 259
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=36.17 E-value=13 Score=23.14 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=14.1
Q ss_pred HHHHHhCCCCCCCcEEEEEe
Q 040309 16 KKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 16 ~~~~~al~~~~pgg~lli~e 35 (100)
+++.+.|+ |||++++.-
T Consensus 161 ~~~~~~L~---pgG~lv~~~ 177 (215)
T 2yxe_A 161 EPLIRQLK---DGGKLLMPV 177 (215)
T ss_dssp HHHHHTEE---EEEEEEEEE
T ss_pred HHHHHHcC---CCcEEEEEE
Confidence 37788899 899999874
No 260
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=36.05 E-value=19 Score=24.76 Aligned_cols=20 Identities=10% Similarity=0.229 Sum_probs=17.8
Q ss_pred ecCHHHHHHHHHHcCCceeE
Q 040309 66 ERSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~~~ 85 (100)
.+|.+++.+++++|||+.++
T Consensus 321 ~~~~~~~~~~i~~~G~~~~~ 340 (350)
T 3t7v_A 321 DRDIKSVVRRLEIMGMKPAR 340 (350)
T ss_dssp CCCHHHHHHHHHHHTCEECC
T ss_pred cCCHHHHHHHHHHcCCcccc
Confidence 47999999999999998765
No 261
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=35.96 E-value=12 Score=25.58 Aligned_cols=22 Identities=18% Similarity=0.167 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
..++++++++.|+ |||.+++..
T Consensus 188 ~~~~l~~~~~~Lk---pgG~lv~~~ 209 (304)
T 2o07_A 188 KESYYQLMKTALK---EDGVLCCQG 209 (304)
T ss_dssp -CHHHHHHHHHEE---EEEEEEEEE
T ss_pred HHHHHHHHHhccC---CCeEEEEec
Confidence 3578999999999 899888754
No 262
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=35.70 E-value=12 Score=21.31 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=15.5
Q ss_pred ecCHHHHHHHHHHcCCcee
Q 040309 66 ERSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~~ 84 (100)
|....|-..||..|||...
T Consensus 20 E~eA~eAC~WLRaaGFPQY 38 (91)
T 2dky_A 20 QIEAKEACDWLRATGFPQY 38 (91)
T ss_dssp HHHHHHHHHHHHHHTCTTH
T ss_pred HHHHHHHHHHHHHcCChHH
Confidence 5566788999999999754
No 263
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=35.67 E-value=13 Score=23.08 Aligned_cols=17 Identities=18% Similarity=0.235 Sum_probs=13.6
Q ss_pred HHHHhCCCCCCCcEEEEEee
Q 040309 17 KCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 17 ~~~~al~~~~pgg~lli~e~ 36 (100)
++.+.|+ |||++++.-.
T Consensus 159 ~~~~~L~---pgG~lv~~~~ 175 (210)
T 3lbf_A 159 ALMTQLD---EGGILVLPVG 175 (210)
T ss_dssp HHHHTEE---EEEEEEEEEC
T ss_pred HHHHhcc---cCcEEEEEEc
Confidence 5778899 8999988653
No 264
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=35.62 E-value=21 Score=24.92 Aligned_cols=25 Identities=12% Similarity=0.161 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
+...++++++.+.|+ |||.+++..+
T Consensus 302 ~~~~~~l~~~~~~Lk---pgG~l~~~~~ 326 (382)
T 1wxx_A 302 RAYKEVNLRAIKLLK---EGGILATASC 326 (382)
T ss_dssp HHHHHHHHHHHHTEE---EEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcC---CCCEEEEEEC
Confidence 445678888899999 8888887764
No 265
>1vfj_A Nitrogen regulatory protein P-II; structural genomics, signal transducing protein, riken structural genomics/proteomics initiative, RSGI; 1.70A {Thermus thermophilus} SCOP: d.58.5.1 PDB: 1ufl_A 1v3s_A* 1v9o_A* 1v3r_A
Probab=35.30 E-value=41 Score=19.43 Aligned_cols=30 Identities=10% Similarity=0.213 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHHhCCCCC-CCcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKD-EGGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~-pgg~lli~e~ 36 (100)
+|+++.++++.+.+++.... -+|+++|.+.
T Consensus 66 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 96 (116)
T 1vfj_A 66 SEPFVKPTVEAILKAARTGEVGDGKIFVLPV 96 (116)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 57777788888877766311 2778888873
No 266
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=34.94 E-value=20 Score=25.12 Aligned_cols=25 Identities=8% Similarity=0.125 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEee
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
....++++++.+.|+ |||.+++..+
T Consensus 312 ~~~~~~l~~~~~~Lk---pgG~lv~~~~ 336 (396)
T 2as0_A 312 RAYFNVNFAGLNLVK---DGGILVTCSC 336 (396)
T ss_dssp HHHHHHHHHHHTTEE---EEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcC---CCcEEEEEEC
Confidence 456778888888898 8888887764
No 267
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=34.43 E-value=16 Score=24.57 Aligned_cols=19 Identities=11% Similarity=0.193 Sum_probs=16.8
Q ss_pred HHHHHHHH-HhCCCCCCCcEEEE
Q 040309 12 VKLLKKCK-EAIPSKDEGGKVII 33 (100)
Q Consensus 12 ~~iL~~~~-~al~~~~pgg~lli 33 (100)
..+++++. +.++ |||.+++
T Consensus 228 l~~~~~i~~~~l~---pgG~l~~ 247 (284)
T 1nv8_A 228 LDFYREFFGRYDT---SGKIVLM 247 (284)
T ss_dssp CHHHHHHHHHCCC---TTCEEEE
T ss_pred HHHHHHHHHhcCC---CCCEEEE
Confidence 48999999 9999 8999886
No 268
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=34.42 E-value=16 Score=23.05 Aligned_cols=17 Identities=35% Similarity=0.331 Sum_probs=14.0
Q ss_pred HHHHhCCCCCCCcEEEEEee
Q 040309 17 KCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 17 ~~~~al~~~~pgg~lli~e~ 36 (100)
++.+.|+ |||++++...
T Consensus 150 ~~~~~L~---pgG~l~~~~~ 166 (231)
T 1vbf_A 150 KPYEQLK---EGGIMILPIG 166 (231)
T ss_dssp HHHHTEE---EEEEEEEEEC
T ss_pred HHHHHcC---CCcEEEEEEc
Confidence 5778899 9999999853
No 269
>2ns1_B Nitrogen regulatory protein P-II 2; protein-protein complex, membrane protein, ammonia, channel, inhibitor, signal protein, ADP, BOG; HET: BOG ADP; 1.96A {Escherichia coli} SCOP: d.58.5.1 PDB: 1gnk_A 2nuu_G* 2gnk_A*
Probab=34.17 E-value=34 Score=19.87 Aligned_cols=30 Identities=13% Similarity=0.331 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHHHHhCCCCC-CCcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKD-EGGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~-pgg~lli~e~ 36 (100)
+|+++.++++.+.++..... -+|+++|.+.
T Consensus 70 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 100 (116)
T 2ns1_B 70 ADDQLDEVIDIVSKAAYTGKIGDGKIFVAEL 100 (116)
T ss_dssp EGGGHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 46777778887777766311 2688888874
No 270
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=33.88 E-value=58 Score=18.96 Aligned_cols=28 Identities=18% Similarity=0.203 Sum_probs=21.4
Q ss_pred ChHHHHHHHHHHHH-hCCCCCCCcEEEEEee
Q 040309 7 NDEESVKLLKKCKE-AIPSKDEGGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~-al~~~~pgg~lli~e~ 36 (100)
+|+.+.+++..+.+ ++. . -+|++.|.|.
T Consensus 69 ~de~vd~vv~~I~~~~~t-~-~~G~ifVsdV 97 (111)
T 3dfe_A 69 NREMAEKIADQVAIKFFT-D-YAGIIYICEA 97 (111)
T ss_dssp SHHHHHHHHHHHHHHHTT-T-SCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhC-C-CCEEEEEEEe
Confidence 47889999999854 555 3 4789888885
No 271
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=32.99 E-value=67 Score=18.17 Aligned_cols=27 Identities=11% Similarity=0.051 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHcCCceeEEEec-CCcce
Q 040309 68 SVDDWKKLFLAAGFSHYKITPI-LGVRS 94 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~~-~~~~~ 94 (100)
+.+++.+|+++.|+++...... ++.+.
T Consensus 65 a~~dI~~~~~~~G~~v~~~e~~~~g~~~ 92 (98)
T 1jdq_A 65 SKERIPETVKKLGHEVLEIEEVGPSEWK 92 (98)
T ss_dssp HHHHHHHHHHHSSCCEEEEEECSSSCEE
T ss_pred HHHHHHHHHHHCCCEEEEEEEecCCEEE
Confidence 5789999999999999887665 34443
No 272
>1mhm_B Adometdc, samdc, S-adenosylmethionine decarboxylase; covalent pyruvoyl group, lyase; 2.30A {Solanum tuberosum} SCOP: d.156.1.1
Probab=32.84 E-value=62 Score=17.57 Aligned_cols=28 Identities=7% Similarity=-0.186 Sum_probs=23.1
Q ss_pred ceecCHHHHHHHHHHcCCceeEEEecCC
Q 040309 64 GKERSVDDWKKLFLAAGFSHYKITPILG 91 (100)
Q Consensus 64 g~~rt~~e~~~ll~~aGf~~~~v~~~~~ 91 (100)
=|.-+.++|..+|+.|.-+++.......
T Consensus 37 LR~i~r~~w~~~L~~a~C~IlS~~sn~~ 64 (72)
T 1mhm_B 37 LRSLSKAQLDEILGPAECTIVDNLSNDY 64 (72)
T ss_dssp GGGCCHHHHHHHHHHHTCEEEEEEECSS
T ss_pred cccCCHHHHHHHHhhcCCEEEEEecCCc
Confidence 3556899999999999999998876543
No 273
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=32.83 E-value=21 Score=22.12 Aligned_cols=23 Identities=17% Similarity=0.234 Sum_probs=17.5
Q ss_pred CceecCHHHHHHHHHHcCCceeE
Q 040309 63 RGKERSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 63 ~g~~rt~~e~~~ll~~aGf~~~~ 85 (100)
.-...|.+|+.+.|++.||.+.+
T Consensus 16 ~~~~~tq~eL~~~L~~~G~~Vtq 38 (149)
T 1b4a_A 16 SNDIETQDELVDRLREAGFNVTQ 38 (149)
T ss_dssp HSCCCSHHHHHHHHHHTTCCCCH
T ss_pred HCCCccHHHHHHHHHHcCCCcCH
Confidence 34567889999999998987543
No 274
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=31.80 E-value=15 Score=24.11 Aligned_cols=49 Identities=10% Similarity=0.024 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
..+++.+.+.|+ |||++++..... . .. ..+++.+.++..||++.++.+.
T Consensus 164 ~~ll~~~~~~Lk---pgG~l~~~~g~~-----~----~~-----------------e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 164 CVLSELLLPFLE---VGGAAVAMKGPR-----V----EE-----------------ELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp HHHHHHHGGGEE---EEEEEEEEECSC-----C----HH-----------------HHTTHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHHHHHcC---CCeEEEEEeCCC-----c----HH-----------------HHHHHHHHHHHcCCeEEEEEEe
Confidence 578999999999 999999865221 1 00 1235677788889999888654
No 275
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=31.49 E-value=28 Score=28.38 Aligned_cols=43 Identities=21% Similarity=0.375 Sum_probs=34.5
Q ss_pred cccccCceecCHHHHHHHHHHcCCceeEEEecCCcc----eEEEEeC
Q 040309 58 MVSLFRGKERSVDDWKKLFLAAGFSHYKITPILGVR----SLIEAYP 100 (100)
Q Consensus 58 ml~~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~~~~----~vie~~p 100 (100)
.+...-|.+.+.+++.+.|.+.||+.+..+...|-+ +||+++|
T Consensus 130 ~l~l~~G~~id~~~l~~~Lv~~GY~rvd~V~~~GeFavRGgIiDIfP 176 (1151)
T 2eyq_A 130 ALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFP 176 (1151)
T ss_dssp CEEEETTCSCCHHHHHHHHHHHTCEEESSCCSTTEEEEETTEEEECC
T ss_pred eEEEeCCCCcCHHHHHHHHHHcCCeecccccCceEEEEeCCEEEEeC
Confidence 344456899999999999999999999887776654 5787776
No 276
>1hwu_A PII protein; herbaspirillum seropedicae PII, beta-alpha-beta motif, signal transduction protein, signaling protein; 2.10A {Herbaspirillum seropedicae} SCOP: d.58.5.1
Probab=31.32 E-value=53 Score=18.78 Aligned_cols=30 Identities=13% Similarity=0.245 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.++.....+ +|+++|.+.
T Consensus 66 ~d~~v~~vv~~I~~~~~tg~~GdGkiFV~~V 96 (112)
T 1hwu_A 66 DDKVVEQAVDAIIKAARTGKIGDGKIFVQEV 96 (112)
T ss_dssp CGGGHHHHHHHHHHHHCCSSTTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 567777777777776663112 588888873
No 277
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=31.29 E-value=29 Score=16.51 Aligned_cols=16 Identities=31% Similarity=0.260 Sum_probs=13.7
Q ss_pred CHHHHHHHHHHcCCce
Q 040309 68 SVDDWKKLFLAAGFSH 83 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~ 83 (100)
+.++..+.++.+||..
T Consensus 50 ~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 50 TQDLIKEALLDAGQEV 65 (66)
T ss_dssp CHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHcCCCc
Confidence 7788999999999975
No 278
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=30.67 E-value=8.5 Score=20.10 Aligned_cols=19 Identities=26% Similarity=0.476 Sum_probs=11.7
Q ss_pred CHHHHHHHHHHc---CCceeEE
Q 040309 68 SVDDWKKLFLAA---GFSHYKI 86 (100)
Q Consensus 68 t~~e~~~ll~~a---Gf~~~~v 86 (100)
...||..++.+| ||++.+|
T Consensus 11 ~d~ewl~LI~~Ak~lGlsleEI 32 (57)
T 1b0n_B 11 LDQEWVELMVEAKEANISPEEI 32 (57)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHH
Confidence 345677666655 7766655
No 279
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=30.58 E-value=79 Score=18.04 Aligned_cols=35 Identities=14% Similarity=-0.015 Sum_probs=21.9
Q ss_pred ceecCHHHHHHHHHHcCCceeEEEec---CCcceEEEE
Q 040309 64 GKERSVDDWKKLFLAAGFSHYKITPI---LGVRSLIEA 98 (100)
Q Consensus 64 g~~rt~~e~~~ll~~aGf~~~~v~~~---~~~~~vie~ 98 (100)
...-|.++++++|++.|.++..+.-. ...++.|+.
T Consensus 37 p~~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F 74 (111)
T 2jvr_A 37 PEGCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEF 74 (111)
T ss_dssp SCCCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEE
T ss_pred CCCCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEE
Confidence 34458889999999999655444321 234666653
No 280
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=30.44 E-value=12 Score=24.98 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeeecC
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMAIE 39 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v~~ 39 (100)
...++++++.+.|+ |||.+++.+....
T Consensus 197 ~~~~~l~~~~~~Lk---pgG~l~~s~~~~~ 223 (272)
T 3a27_A 197 KTHKFLDKTFEFLK---DRGVIHYHETVAE 223 (272)
T ss_dssp SGGGGHHHHHHHEE---EEEEEEEEEEEEG
T ss_pred cHHHHHHHHHHHcC---CCCEEEEEEcCcc
Confidence 35678888899999 8999998887654
No 281
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=29.93 E-value=53 Score=22.21 Aligned_cols=49 Identities=10% Similarity=0.188 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCcee
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~ 84 (100)
+.+.|..+.+.++ +||.|.+++.+-.+.. .....+.++++.++.|+++.
T Consensus 204 ~~~~l~~a~~~lk---~gG~ih~~~~~~e~~~----------------------~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 204 THEFIPKALSIAK---DGAIIHYHNTVPEKLM----------------------PREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp GGGGHHHHHHHEE---EEEEEEEEEEEEGGGT----------------------TTTTHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcC---CCCEEEEEeeeccccc----------------------chhHHHHHHHHHHHcCCcEE
Confidence 4566777777888 7887777776533211 11244567788888998764
No 282
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=29.78 E-value=38 Score=15.95 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=14.0
Q ss_pred cCHHHHHHHHHHcCCcee
Q 040309 67 RSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~ 84 (100)
-+.+++.+.++.+||...
T Consensus 51 ~~~~~i~~~i~~~G~~~~ 68 (69)
T 2qif_A 51 VSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp CCHHHHHHHHHHTTCEEC
T ss_pred CCHHHHHHHHHHcCCCcc
Confidence 356788888999999753
No 283
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=29.29 E-value=47 Score=18.84 Aligned_cols=27 Identities=11% Similarity=-0.013 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHcCCceeEEEecCCcce
Q 040309 68 SVDDWKKLFLAAGFSHYKITPILGVRS 94 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~~~~~~~ 94 (100)
+.+++.+|+++.|+++......++.+.
T Consensus 66 a~~dIp~~~~~~G~~v~~~e~~~~~~~ 92 (97)
T 1je3_A 66 SINNIPLDARNHGYTVLDIQQDGPTIR 92 (97)
T ss_dssp SSCHHHHHHHHHTCSEEEEEECSSSEE
T ss_pred hHHHHHHHHHHCCCEEEEEEeeCCEEE
Confidence 456788999999999987665555443
No 284
>2bh1_A General secretion pathway protein L; transport protein, type II secretion, EPS, transmembrane, transport, ATP-binding; 2.4A {Vibrio cholerae} SCOP: c.55.1.11 c.55.1.11 PDB: 1yf5_L 1w97_L
Probab=29.26 E-value=50 Score=22.01 Aligned_cols=21 Identities=19% Similarity=0.292 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHcCCceeEEEe
Q 040309 68 SVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~ 88 (100)
-.+.|..+|+++|++...++|
T Consensus 117 ~l~~wl~~l~~~Gl~~~~i~P 137 (250)
T 2bh1_A 117 WLRACLDHLKACGFDVKRVLP 137 (250)
T ss_dssp HHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHCCCCccEEEe
Confidence 356788889999999999987
No 285
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=29.21 E-value=24 Score=25.76 Aligned_cols=24 Identities=13% Similarity=0.275 Sum_probs=20.3
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
.+||+++.+.|+ |||+|+..-+.+
T Consensus 214 ~~iL~~a~~~Lk---pGG~LvYsTCs~ 237 (456)
T 3m4x_A 214 QEILSSAIKMLK---NKGQLIYSTCTF 237 (456)
T ss_dssp HHHHHHHHHTEE---EEEEEEEEESCC
T ss_pred HHHHHHHHHhcC---CCcEEEEEEeec
Confidence 389999999999 999999876654
No 286
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=29.17 E-value=24 Score=23.54 Aligned_cols=21 Identities=10% Similarity=0.115 Sum_probs=17.2
Q ss_pred HHHHHHHHhCCCCCCCc--EEEEEee
Q 040309 13 KLLKKCKEAIPSKDEGG--KVIIIDM 36 (100)
Q Consensus 13 ~iL~~~~~al~~~~pgg--~lli~e~ 36 (100)
++|+.+++.|+ ||| .+++...
T Consensus 164 ~~L~~~~r~Lk---pGG~~~fv~kv~ 186 (265)
T 2oxt_A 164 KILELLEKWKV---KNPSADFVVKVL 186 (265)
T ss_dssp HHHHHHHHHHH---HCTTCEEEEEES
T ss_pred HHHHHHHHHhc---cCCCeEEEEEeC
Confidence 58899999999 999 8887443
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=29.06 E-value=27 Score=23.49 Aligned_cols=20 Identities=15% Similarity=0.486 Sum_probs=16.9
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEE
Q 040309 12 VKLLKKCKEAIPSKDEGGKVIII 34 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg~lli~ 34 (100)
.++++.+++.|+ |||.+++.
T Consensus 77 ~~~~~~~~rvLk---~~G~l~i~ 96 (297)
T 2zig_A 77 DRVWREVFRLLV---PGGRLVIV 96 (297)
T ss_dssp HHHHHHHHHHEE---EEEEEEEE
T ss_pred HHHHHHHHHHcC---CCcEEEEE
Confidence 568899999999 89988765
No 288
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.78 E-value=78 Score=17.43 Aligned_cols=34 Identities=18% Similarity=0.054 Sum_probs=22.5
Q ss_pred ceecCHHHHHHHHHHcCCceeEEEecCCcceEEEE
Q 040309 64 GKERSVDDWKKLFLAAGFSHYKITPILGVRSLIEA 98 (100)
Q Consensus 64 g~~rt~~e~~~ll~~aGf~~~~v~~~~~~~~vie~ 98 (100)
...-|.++++++|.+.| .+..+.-....++.||.
T Consensus 24 p~~~t~~~l~~~F~~~G-~i~~~~i~~~g~afV~f 57 (108)
T 1x4c_A 24 PPSGSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 57 (108)
T ss_dssp CSSCCHHHHHHHHGGGS-CEEEEEEETTTEEEEEE
T ss_pred CCCCCHHHHHHHHHhcC-CEeEEEEecCCEEEEEE
Confidence 45568999999999998 55555333224566553
No 289
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=28.66 E-value=27 Score=20.92 Aligned_cols=32 Identities=9% Similarity=-0.098 Sum_probs=22.5
Q ss_pred ccCceecCHHHHHHHHHHcCCceeEEEecCCc
Q 040309 61 LFRGKERSVDDWKKLFLAAGFSHYKITPILGV 92 (100)
Q Consensus 61 ~~~g~~rt~~e~~~ll~~aGf~~~~v~~~~~~ 92 (100)
......|.....-..|.+.||++...-+-.|.
T Consensus 19 l~~~fdraW~rvg~ALdr~Gf~V~Drdrs~G~ 50 (127)
T 2yh5_A 19 VRGPFNVVWQRLPAALEKVGMKVTDSTRSQGN 50 (127)
T ss_dssp EESCHHHHHHHHHHHHHHTTEEEEEEEGGGTE
T ss_pred EcCCHHHHHHHHHHHHHhCCCeEEeeeccCeE
Confidence 34466677777778888888888877655443
No 290
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=28.62 E-value=81 Score=17.71 Aligned_cols=34 Identities=9% Similarity=-0.005 Sum_probs=24.0
Q ss_pred ceecCHHHHHHHHHHcCCceeEEE-ecCCcceEEEE
Q 040309 64 GKERSVDDWKKLFLAAGFSHYKIT-PILGVRSLIEA 98 (100)
Q Consensus 64 g~~rt~~e~~~ll~~aGf~~~~v~-~~~~~~~vie~ 98 (100)
...-|.++.+.+|.+.| ++..+. .....++.+|.
T Consensus 16 ~~~~te~~L~~lF~q~G-~V~~~~l~~~kGfaFVey 50 (89)
T 2wbr_A 16 TAQIDGPTLRTLCMQHG-PLVSFHPYLNQGIALCKY 50 (89)
T ss_dssp CTTCCCHHHHHHHHHHS-CEEEEEEETTTTEEEEEE
T ss_pred CccCCHHHHHHHHHhhC-CEEEEEEcCCCcEEEEEE
Confidence 45568889999999999 666654 33456777764
No 291
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=28.48 E-value=9.3 Score=24.18 Aligned_cols=21 Identities=14% Similarity=0.240 Sum_probs=16.9
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEee
Q 040309 13 KLLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 13 ~iL~~~~~al~~~~pgg~lli~e~ 36 (100)
.+++++++.|+ |||++++...
T Consensus 163 ~~~~~~~~~Lk---pgG~lv~~~~ 183 (226)
T 1i1n_A 163 VVPQALIDQLK---PGGRLILPVG 183 (226)
T ss_dssp SCCHHHHHTEE---EEEEEEEEES
T ss_pred HHHHHHHHhcC---CCcEEEEEEe
Confidence 45678899999 9999998643
No 292
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=27.66 E-value=30 Score=24.54 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 11 SVKLLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 11 ~~~iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
-.++++.+.+.|+ |||.|+++.+..
T Consensus 305 ~~~ll~~a~~~Lk---pGG~Lv~~s~s~ 329 (393)
T 4dmg_A 305 LVDLVREALRLLA---EEGFLWLSSCSY 329 (393)
T ss_dssp HHHHHHHHHHTEE---EEEEEEEEECCT
T ss_pred HHHHHHHHHHhcC---CCCEEEEEECCC
Confidence 3688999999999 999999777543
No 293
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=27.52 E-value=22 Score=22.24 Aligned_cols=25 Identities=0% Similarity=-0.064 Sum_probs=17.7
Q ss_pred HHHHHHHHH--HHhCCCCCCCcEEEEEeee
Q 040309 10 ESVKLLKKC--KEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 10 ~~~~iL~~~--~~al~~~~pgg~lli~e~v 37 (100)
...++++.+ .+.|+ |||++++....
T Consensus 139 ~~~~~l~~~~~~~~Lk---pgG~l~i~~~~ 165 (201)
T 2ift_A 139 LAEQAISLLCENNWLK---PNALIYVETEK 165 (201)
T ss_dssp HHHHHHHHHHHTTCEE---EEEEEEEEEES
T ss_pred cHHHHHHHHHhcCccC---CCcEEEEEECC
Confidence 456777777 44688 89988876654
No 294
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=27.36 E-value=65 Score=22.97 Aligned_cols=80 Identities=9% Similarity=0.041 Sum_probs=44.7
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEE----EeeecCCCC-CCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHc
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVII----IDMAIENQS-QDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAA 79 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli----~e~v~~~~~-~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~a 79 (100)
..++++..+++..+...-- |..+.++ .++.++... ..+|....+.-....+++. -++.-..+.+.+.++.|
T Consensus 105 ~i~~~di~~~i~~a~~~~~---p~d~~~l~~~p~~f~vDg~~~i~~P~Gm~g~~l~~~v~~v-~~~~~~v~n~~~~~~~A 180 (419)
T 4a2a_A 105 SITLDILSEMQSEALEKLK---ENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSI-VVPLKVYEMFYNFLQDT 180 (419)
T ss_dssp ECCHHHHHHHHHHHHHHHS---CTTEEEEEEEEEEEEETTTEEESCCTTCEESEEEEEEEEE-EEEHHHHHHHHHHHHTT
T ss_pred EECHHHHHHHHHHhhhhcC---CCCCEEEEEEeeEEEECCccCcCCCCCCcccEEEEEEEEE-EEeHHHHHHHHHHHHHc
Confidence 4567888888887654322 4556555 355665433 1222211111112222222 24445678899999999
Q ss_pred CCceeEEEe
Q 040309 80 GFSHYKITP 88 (100)
Q Consensus 80 Gf~~~~v~~ 88 (100)
||++..+..
T Consensus 181 GL~v~~lv~ 189 (419)
T 4a2a_A 181 VKSPFQLKS 189 (419)
T ss_dssp SCSCEEEEE
T ss_pred CCcEEEEEE
Confidence 999988753
No 295
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=27.15 E-value=53 Score=18.13 Aligned_cols=26 Identities=19% Similarity=0.189 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHcCCceeEEEecCCcc
Q 040309 68 SVDDWKKLFLAAGFSHYKITPILGVR 93 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~~~~~~ 93 (100)
+.+++.+|+++.|+++......++.+
T Consensus 41 a~~dI~~~~~~~G~~v~~~~~~~g~~ 66 (87)
T 3hz7_A 41 SRQNLQKMAEGMGYQSEYLEKDNGVI 66 (87)
T ss_dssp HHHHHHHHHHHHTCEEEEEECGGGCE
T ss_pred HHHHHHHHHHHCCCEEEEEEecCCEE
Confidence 56788899999999987654343433
No 296
>1wwu_A Hypothetical protein FLJ21935; structural genomics, protein regulation, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens}
Probab=27.03 E-value=37 Score=19.70 Aligned_cols=24 Identities=21% Similarity=0.268 Sum_probs=18.9
Q ss_pred ecCHHHHHHHHHHcCCceeEEEec
Q 040309 66 ERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
.-|.+|.++||..-||....+..+
T Consensus 23 ~Ssp~EV~~WL~~kgFS~~tv~~L 46 (99)
T 1wwu_A 23 ESGPDEVRAWLEAKAFSPRIVENL 46 (99)
T ss_dssp TCCHHHHHHHHHHHTCCTTHHHHT
T ss_pred CCCHHHHHHHHHHcCCCHHHHHHH
Confidence 348999999999999987654433
No 297
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=26.87 E-value=41 Score=23.17 Aligned_cols=66 Identities=6% Similarity=-0.038 Sum_probs=37.8
Q ss_pred cccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCc
Q 040309 3 LHNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFS 82 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~ 82 (100)
+|...+++-...+ ++.++|+ ++|.++-.+.-.=.++++ .+ .+.-.+.|++++.+.|..
T Consensus 208 i~~Le~q~kg~g~-~ll~aL~---~~~vvVSfp~ksl~Grs~--------gm----------~~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 208 LPCLETQQRGSGW-EVIDIVN---SPNIVVTFPTKSLGQRSK--------GM----------FQNYSQSFESQARERSCR 265 (281)
T ss_dssp HHHHHHHSTTHHH-HHHHHSS---CSEEEEEEECC---------------CH----------HHHHHHHHHHHHHHHTCC
T ss_pred HHHhhhhhhHHHH-HHHHHhC---CCCEEEeccchhhcCCCc--------ch----------hhHHHHHHHHHHHhcCCc
Confidence 5566666666677 8999999 777777666511111211 01 111345788999999985
Q ss_pred eeEEEecCC
Q 040309 83 HYKITPILG 91 (100)
Q Consensus 83 ~~~v~~~~~ 91 (100)
+.+ ..+++
T Consensus 266 ~~~-~~~~n 273 (281)
T 3lcv_B 266 IQR-LEIGN 273 (281)
T ss_dssp EEE-EEETT
T ss_pred eee-eeecC
Confidence 444 44444
No 298
>3ce8_A Putative PII-like nitrogen regulatory protein; structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE; 2.40A {Shewanella baltica}
Probab=26.68 E-value=70 Score=19.03 Aligned_cols=26 Identities=12% Similarity=0.087 Sum_probs=19.4
Q ss_pred ChHHHHHHHHHHHHhCCCCCCCc-EEEEEe
Q 040309 7 NDEESVKLLKKCKEAIPSKDEGG-KVIIID 35 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~pgg-~lli~e 35 (100)
+|+++.+++..+.++.+ .|. +++|.+
T Consensus 86 ~d~~ve~vv~aI~~~a~---tg~IKIfV~p 112 (120)
T 3ce8_A 86 PAAQQAALLTALALVCK---HNPCRYWIMP 112 (120)
T ss_dssp EGGGHHHHHHHHHHHTT---TSCCEEEEEE
T ss_pred CHHHHHHHHHHHHHHcC---CCCEEEEEEE
Confidence 57889999999999987 444 555544
No 299
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=26.50 E-value=40 Score=23.41 Aligned_cols=24 Identities=4% Similarity=0.284 Sum_probs=21.6
Q ss_pred CceecCHHHHHHHHHHcCCceeEE
Q 040309 63 RGKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 63 ~g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
+|...+.+|..+++++.||..+++
T Consensus 39 ~~~~~~t~~m~~~i~~~G~N~vRi 62 (340)
T 3qr3_A 39 NNYPDGIGQMQHFVNEDGMTIFRL 62 (340)
T ss_dssp SCSCCHHHHHHHHHHHHCCCEEEE
T ss_pred ccCCccHHHHHHHHHHCCCCEEEE
Confidence 467788999999999999999987
No 300
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=26.28 E-value=63 Score=18.89 Aligned_cols=27 Identities=15% Similarity=0.021 Sum_probs=20.8
Q ss_pred cccCceecCHHHHHHHHHHcCCceeEE
Q 040309 60 SLFRGKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 60 ~~~~g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
+.+|.-.++.+|+.+++++.|-++..-
T Consensus 17 ViTG~l~~~R~e~k~~ie~~Ggkv~~s 43 (113)
T 2cok_A 17 LTLGKLSRNKDEVKAMIEKLGGKLTGT 43 (113)
T ss_dssp EECSCCSSCHHHHHHHHHHTTCEEESC
T ss_pred EEEecCCCCHHHHHHHHHHCCCEEcCc
Confidence 445655569999999999999877544
No 301
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=26.04 E-value=71 Score=18.11 Aligned_cols=16 Identities=25% Similarity=0.484 Sum_probs=13.9
Q ss_pred cccCChHHHHHHHHHH
Q 040309 3 LHNWNDEESVKLLKKC 18 (100)
Q Consensus 3 lHdw~d~~~~~iL~~~ 18 (100)
+..|+.++++++|+++
T Consensus 61 v~g~~h~evv~lLk~~ 76 (95)
T 3gge_A 61 IVGWRHYDVAKKLKEL 76 (95)
T ss_dssp CTTCCHHHHHHHHHHS
T ss_pred ccCCCHHHHHHHHHhC
Confidence 4578999999999996
No 302
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=25.80 E-value=39 Score=17.42 Aligned_cols=24 Identities=29% Similarity=0.328 Sum_probs=19.3
Q ss_pred cCceecCHHHHHHHHHHcCCceeE
Q 040309 62 FRGKERSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 62 ~~g~~rt~~e~~~ll~~aGf~~~~ 85 (100)
..|.+-|.++..++++.+|-++..
T Consensus 12 ~~g~~~t~~~I~~il~aaGveve~ 35 (58)
T 3a1y_A 12 SVGKEINEENLKAVLQAAGVEPEE 35 (58)
T ss_dssp HTTCCCCHHHHHHHHHHTTCCCCH
T ss_pred hCCCCCCHHHHHHHHHHcCCCccH
Confidence 356788999999999999966543
No 303
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=25.77 E-value=78 Score=20.68 Aligned_cols=33 Identities=12% Similarity=0.062 Sum_probs=24.5
Q ss_pred cCHHHHHHHHHHcCCceeEEE--ec-CCcceEEEEe
Q 040309 67 RSVDDWKKLFLAAGFSHYKIT--PI-LGVRSLIEAY 99 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~~v~--~~-~~~~~vie~~ 99 (100)
......+++|.+.||.+.+.. .- +-++.+|.+.
T Consensus 121 ~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 121 NREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp SCHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 367889999999999998764 22 3357777764
No 304
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=25.37 E-value=79 Score=17.74 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=20.9
Q ss_pred eecCHHHHHHHHHHcCCceeEEEecCCcceEEEE
Q 040309 65 KERSVDDWKKLFLAAGFSHYKITPILGVRSLIEA 98 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v~~~~~~~~vie~ 98 (100)
..-|.++++++|.+.| ++..+.-....++.|+.
T Consensus 26 ~~~t~~~l~~~F~~~G-~v~~~~i~~~g~afV~f 58 (115)
T 3beg_B 26 PSGSWQDLKDHMREAG-DVCYADVYRDGTGVVEF 58 (115)
T ss_dssp SSCCTTHHHHHHGGGS-CEEEEEECTTSEEEEEE
T ss_pred CCCCHHHHHHHHHhcC-CeEEEEEecCCEEEEEE
Confidence 4457888899999888 55555433224555553
No 305
>2qlw_A RHAU; mutarotase, isomerase; HET: MSE; 1.60A {Rhizobium leguminosarum BV} PDB: 2qlx_A*
Probab=25.37 E-value=1.1e+02 Score=18.90 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=22.9
Q ss_pred HHHHHHHHHcCCceeEEEec--CC-cceEEEEe
Q 040309 70 DDWKKLFLAAGFSHYKITPI--LG-VRSLIEAY 99 (100)
Q Consensus 70 ~e~~~ll~~aGf~~~~v~~~--~~-~~~vie~~ 99 (100)
.|..+.|++||.+..+|+.. ++ .++++|..
T Consensus 67 PEv~~~Lk~aGI~nYSIfl~~~~~~LF~~~E~~ 99 (144)
T 2qlw_A 67 PELVDLLHQSGASDYSIHLDRETNTLFGVLTRP 99 (144)
T ss_dssp HHHHHHHHHHTCEEEEEEEETTTTEEEEEEEEE
T ss_pred HHHHHHHHHcCCeEEEEEEECCCCeEEEEEEEc
Confidence 45667889999999999876 33 47788763
No 306
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=25.26 E-value=26 Score=22.28 Aligned_cols=17 Identities=35% Similarity=0.405 Sum_probs=13.5
Q ss_pred HHHHHhCCCCCCCcEEEEEe
Q 040309 16 KKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 16 ~~~~~al~~~~pgg~lli~e 35 (100)
+++.+.|+ |||++++.-
T Consensus 173 ~~~~~~L~---pgG~lvi~~ 189 (235)
T 1jg1_A 173 EPLIEQLK---IGGKLIIPV 189 (235)
T ss_dssp HHHHHTEE---EEEEEEEEE
T ss_pred HHHHHhcC---CCcEEEEEE
Confidence 36788899 899998854
No 307
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=25.10 E-value=37 Score=19.91 Aligned_cols=16 Identities=13% Similarity=0.258 Sum_probs=11.9
Q ss_pred HHhCCCCCCCcEEEEEeee
Q 040309 19 KEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 19 ~~al~~~~pgg~lli~e~v 37 (100)
.+.|+ |||++++....
T Consensus 134 ~~~L~---~gG~~~~~~~~ 149 (171)
T 1ws6_A 134 SGLVE---AGGLYVLQHPK 149 (171)
T ss_dssp HTCEE---EEEEEEEEEET
T ss_pred hcccC---CCcEEEEEeCC
Confidence 48899 89988775543
No 308
>3bzq_A Nitrogen regulatory protein P-II; GLNB, GLNK, signal transdu protein, nucleotide-binding, transcription; 1.40A {Mycobacterium tuberculosis H37RV} PDB: 3lf0_A*
Probab=25.02 E-value=50 Score=18.94 Aligned_cols=30 Identities=20% Similarity=0.203 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHHHhCCCCCC-CcEEEEEee
Q 040309 7 NDEESVKLLKKCKEAIPSKDE-GGKVIIIDM 36 (100)
Q Consensus 7 ~d~~~~~iL~~~~~al~~~~p-gg~lli~e~ 36 (100)
+|+++.++++.+.+++....+ +|+++|.+.
T Consensus 68 ~de~v~~vv~~I~~~~~tg~~GdGkiFV~pV 98 (114)
T 3bzq_A 68 DDSIVDKVVDSIVRAARTGKIGDGKVWVSPV 98 (114)
T ss_dssp ETTTHHHHHHHHHHHHCCSSTTCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCEEEEEEEh
Confidence 356666777777666553112 578888874
No 309
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=24.98 E-value=1.2e+02 Score=20.00 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=11.7
Q ss_pred CCcEEEEEeeecCCCC
Q 040309 27 EGGKVIIIDMAIENQS 42 (100)
Q Consensus 27 pgg~lli~e~v~~~~~ 42 (100)
+|-++||+|-++..++
T Consensus 136 ~Gk~VLIVDDvitTG~ 151 (234)
T 3m3h_A 136 KGQKVVVVEDLISTGG 151 (234)
T ss_dssp TTCEEEEEEEEESSSH
T ss_pred CCCEEEEEecccchhH
Confidence 5778888888876544
No 310
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=24.85 E-value=12 Score=23.65 Aligned_cols=20 Identities=30% Similarity=0.292 Sum_probs=16.3
Q ss_pred HHHHHHHhCCCCCCCcEEEEEee
Q 040309 14 LLKKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 14 iL~~~~~al~~~~pgg~lli~e~ 36 (100)
+++++.+.|+ |||++++.-.
T Consensus 175 ~~~~~~~~Lk---pgG~lv~~~~ 194 (227)
T 2pbf_A 175 LPEILVDLLA---ENGKLIIPIE 194 (227)
T ss_dssp CCHHHHHHEE---EEEEEEEEEE
T ss_pred HHHHHHHhcC---CCcEEEEEEc
Confidence 5678889999 8999988753
No 311
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=24.61 E-value=46 Score=19.84 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=17.3
Q ss_pred HHHHHHHHHH--HhCCCCCCCcEEEEEeee
Q 040309 10 ESVKLLKKCK--EAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 10 ~~~~iL~~~~--~al~~~~pgg~lli~e~v 37 (100)
...++++.+. +.|+ |||.+++....
T Consensus 114 ~~~~~~~~l~~~~~L~---~gG~l~~~~~~ 140 (177)
T 2esr_A 114 TIVATIEALAAKNLLS---EQVMVVCETDK 140 (177)
T ss_dssp HHHHHHHHHHHTTCEE---EEEEEEEEEET
T ss_pred hHHHHHHHHHhCCCcC---CCcEEEEEECC
Confidence 3455666665 7889 89988876543
No 312
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=24.61 E-value=88 Score=21.02 Aligned_cols=29 Identities=10% Similarity=0.282 Sum_probs=21.0
Q ss_pred ccCCh-------HHHHHHHHHHHHhCCCCCCCcEEEEEe
Q 040309 4 HNWND-------EESVKLLKKCKEAIPSKDEGGKVIIID 35 (100)
Q Consensus 4 Hdw~d-------~~~~~iL~~~~~al~~~~pgg~lli~e 35 (100)
++|+| +...++++.+.+... .+|.++|+-
T Consensus 181 ~~WpD~gvP~~~~~~l~~i~~v~~~~~---~~~PivVHC 216 (287)
T 2b49_A 181 VAWPDHGVPDDSSDFLEFVNYVRSLRV---DSEPVLVHC 216 (287)
T ss_dssp CCSCSSSCCSSCHHHHHHHHHHHHHCC---TTCCEEEEC
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhcc---CCCcEEEEc
Confidence 46876 356788888888766 567777764
No 313
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=24.54 E-value=25 Score=24.19 Aligned_cols=21 Identities=19% Similarity=0.223 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEE
Q 040309 9 EESVKLLKKCKEAIPSKDEGGKVI 32 (100)
Q Consensus 9 ~~~~~iL~~~~~al~~~~pgg~ll 32 (100)
....++|+++++.|+ |||+++
T Consensus 148 ~~~~~~l~~~~~~Lk---pgG~li 168 (340)
T 2fyt_A 148 SMLDSVLYAKNKYLA---KGGSVY 168 (340)
T ss_dssp CHHHHHHHHHHHHEE---EEEEEE
T ss_pred HHHHHHHHHHHhhcC---CCcEEE
Confidence 345779999999999 999987
No 314
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.45 E-value=52 Score=19.09 Aligned_cols=25 Identities=16% Similarity=0.373 Sum_probs=15.7
Q ss_pred CceecCHHHHHHHHHHcCCceeEEE
Q 040309 63 RGKERSVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 63 ~g~~rt~~e~~~ll~~aGf~~~~v~ 87 (100)
...+-|...|+++++..||++-.+.
T Consensus 9 stdeetlrkfkdiikkngfkvrtvr 33 (134)
T 2l69_A 9 STDEETLRKFKDIIKKNGFKVRTVR 33 (134)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred eCCHHHHHHHHHHHHhcCceEEEec
Confidence 3445566667777777777765553
No 315
>2kue_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=24.38 E-value=1.1e+02 Score=17.85 Aligned_cols=19 Identities=26% Similarity=0.408 Sum_probs=17.0
Q ss_pred ecCHHHHHHHHHHcCCcee
Q 040309 66 ERSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~~ 84 (100)
-.|.++-+++|+++||++.
T Consensus 83 G~~~~~A~~~L~~~Gl~~~ 101 (138)
T 2kue_A 83 GQTVDVAQKNLNVYGFTKF 101 (138)
T ss_dssp TSBHHHHHHHHHHHSCSCE
T ss_pred CCCHHHHHHHHHHCCCeee
Confidence 4689999999999999976
No 316
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=24.32 E-value=30 Score=19.75 Aligned_cols=20 Identities=10% Similarity=-0.039 Sum_probs=17.4
Q ss_pred ceecCHHHHHHHHHHcCCce
Q 040309 64 GKERSVDDWKKLFLAAGFSH 83 (100)
Q Consensus 64 g~~rt~~e~~~ll~~aGf~~ 83 (100)
-...|.+|...||++.||..
T Consensus 17 v~~Ws~edV~~WL~~~Gl~~ 36 (97)
T 2d8c_A 17 VVYWSPKKVADWLLENAMPE 36 (97)
T ss_dssp CSSCCTTHHHHHHHHTTCTT
T ss_pred hhhCCHHHHHHHHHHcCCHH
Confidence 46789999999999999875
No 317
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=24.27 E-value=16 Score=25.50 Aligned_cols=25 Identities=4% Similarity=-0.092 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEEeee
Q 040309 10 ESVKLLKKCKEAIPSKDEGGKVIIIDMA 37 (100)
Q Consensus 10 ~~~~iL~~~~~al~~~~pgg~lli~e~v 37 (100)
....+++.+.+.|+ |||.+++.+..
T Consensus 147 ~~~~~l~~~~~~Lk---pgG~li~~~~~ 171 (376)
T 3r0q_C 147 MFDSVISARDRWLK---PTGVMYPSHAR 171 (376)
T ss_dssp THHHHHHHHHHHEE---EEEEEESSEEE
T ss_pred HHHHHHHHHHhhCC---CCeEEEEecCe
Confidence 35678999999999 99999877754
No 318
>4ed9_A CAIB/BAIF family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: NHE; 1.95A {Brucella suis}
Probab=24.15 E-value=44 Score=23.82 Aligned_cols=23 Identities=22% Similarity=0.156 Sum_probs=19.2
Q ss_pred eecCHHHHHHHHHHcCCceeEEE
Q 040309 65 KERSVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v~ 87 (100)
+.||.+||.++|+++|.-...|.
T Consensus 303 ~~~t~~ew~~~l~~~~vp~~pV~ 325 (385)
T 4ed9_A 303 KQWKRDDLLAELAKIGVPAGPIN 325 (385)
T ss_dssp TTSCHHHHHHHHHHTTCCEEECC
T ss_pred hhCCHHHHHHHHHHcCccEEeCC
Confidence 56899999999999997766654
No 319
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=24.14 E-value=41 Score=22.47 Aligned_cols=72 Identities=17% Similarity=0.264 Sum_probs=38.9
Q ss_pred ccCChH---HHH-HHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhh-----hcccccCceecCHHHHHH
Q 040309 4 HNWNDE---ESV-KLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDI-----LMVSLFRGKERSVDDWKK 74 (100)
Q Consensus 4 Hdw~d~---~~~-~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl-----~ml~~~~g~~rt~~e~~~ 74 (100)
+.|.+. ++. ++++.+.+. . +.+++.+.-.+.....+.+.....+... .+=+..+|..+|.++.++
T Consensus 149 ~gw~~~t~~~~~~e~a~~~~~~-a-----~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~ 222 (260)
T 2agk_A 149 NKWQTLTDLELNADTFRELRKY-T-----NEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKL 222 (260)
T ss_dssp TTTTEEEEEEESHHHHHHHTTT-C-----SEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHH
T ss_pred cCCccccCccHHHHHHHHHHHh-c-----CEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHH
Confidence 456543 345 777777665 5 6788877655443333222111222221 223445799999999999
Q ss_pred HHHHc-CC
Q 040309 75 LFLAA-GF 81 (100)
Q Consensus 75 ll~~a-Gf 81 (100)
+++.. |.
T Consensus 223 l~~~~~G~ 230 (260)
T 2agk_A 223 VDELSHGK 230 (260)
T ss_dssp HHHHHTTC
T ss_pred HHHhcCCC
Confidence 99986 63
No 320
>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} SCOP: c.123.1.1 PDB: 1xk6_A 1xvt_A* 1xvu_A* 1xvv_A* 1xa3_A* 1xa4_A*
Probab=23.94 E-value=39 Score=24.24 Aligned_cols=24 Identities=13% Similarity=0.216 Sum_probs=20.0
Q ss_pred eecCHHHHHHHHHHcCCceeEEEe
Q 040309 65 KERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
+.||.+||.++|+++|.-...|..
T Consensus 304 ~~~t~~ew~~~l~~~~vp~~pV~~ 327 (408)
T 1xk7_A 304 ATHTIAEVKERFAELNIACAKVLT 327 (408)
T ss_dssp HTSCHHHHHHHHHHTTCEEEECCC
T ss_pred HhCCHHHHHHHHHhCCCCcccCCC
Confidence 568999999999999977766644
No 321
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=23.78 E-value=1.8e+02 Score=19.97 Aligned_cols=27 Identities=11% Similarity=-0.012 Sum_probs=19.8
Q ss_pred ccCceecCHHHHHHHHHHcCCceeEEE
Q 040309 61 LFRGKERSVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 61 ~~~g~~rt~~e~~~ll~~aGf~~~~v~ 87 (100)
..+...++..+++++++.-....+.+.
T Consensus 238 a~dE~~~~~~~~~~~l~~~~~d~v~~k 264 (354)
T 3jva_A 238 MADESCFDAQDALELVKKGTVDVINIK 264 (354)
T ss_dssp EESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred EEcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 345667889999999987766666554
No 322
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=23.66 E-value=1.1e+02 Score=21.21 Aligned_cols=23 Identities=22% Similarity=0.089 Sum_probs=16.9
Q ss_pred HHHHHHHHHHcCCceeEEEecCC
Q 040309 69 VDDWKKLFLAAGFSHYKITPILG 91 (100)
Q Consensus 69 ~~e~~~ll~~aGf~~~~v~~~~~ 91 (100)
....++-|++|||++.++-..++
T Consensus 228 ag~VRR~L~~aGF~V~k~~G~g~ 250 (308)
T 3vyw_A 228 SLSVRKSLLTLGFKVGSSREIGR 250 (308)
T ss_dssp CHHHHHHHHHTTCEEEEEECC--
T ss_pred cHHHHHHHHHCCCEEEecCCCCC
Confidence 34678889999999988765543
No 323
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=23.60 E-value=35 Score=22.91 Aligned_cols=21 Identities=5% Similarity=-0.035 Sum_probs=17.0
Q ss_pred HHHHHHHHHhCCCCCCCc--EEEEEe
Q 040309 12 VKLLKKCKEAIPSKDEGG--KVIIID 35 (100)
Q Consensus 12 ~~iL~~~~~al~~~~pgg--~lli~e 35 (100)
.++|+.+.+.|+ ||| ++++..
T Consensus 171 l~~L~~~~r~Lk---pGG~~~~v~~~ 193 (276)
T 2wa2_A 171 LTVLNVISRWLE---YNQGCGFCVKV 193 (276)
T ss_dssp HHHHHHHHHHHH---HSTTCEEEEEE
T ss_pred HHHHHHHHHHhc---cCCCcEEEEEe
Confidence 358899999999 999 877743
No 324
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=23.48 E-value=57 Score=15.66 Aligned_cols=19 Identities=5% Similarity=0.004 Sum_probs=15.2
Q ss_pred cCHHHHHHHHHHcCCceeE
Q 040309 67 RSVDDWKKLFLAAGFSHYK 85 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~~ 85 (100)
-+.++..+.++.+||....
T Consensus 46 ~~~~~i~~~i~~~Gy~~~~ 64 (66)
T 2roe_A 46 ADPKALVQAVEEEGYKAEV 64 (66)
T ss_dssp CCHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHHHHcCCCcEe
Confidence 4778899999999997543
No 325
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=23.42 E-value=59 Score=14.21 Aligned_cols=17 Identities=24% Similarity=0.630 Sum_probs=12.8
Q ss_pred cCChHHHHHHHHHHHHh
Q 040309 5 NWNDEESVKLLKKCKEA 21 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~a 21 (100)
.|++.+..++|.||.+.
T Consensus 8 rfdekqieelldnciet 24 (31)
T 4h62_V 8 RFDEKQIEELLDNCIET 24 (31)
T ss_dssp --CHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHH
Confidence 57788899999999764
No 326
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=23.33 E-value=1.4e+02 Score=18.95 Aligned_cols=61 Identities=20% Similarity=0.281 Sum_probs=29.3
Q ss_pred CCcEEEEEeeecCCCCCCchhh----hhh-hhhhhhccccc--CceecCHHHHHHHHHHcCCceeEEEec
Q 040309 27 EGGKVIIIDMAIENQSQDKESM----ETQ-LCFDILMVSLF--RGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 27 pgg~lli~e~v~~~~~~~~~~~----~~~-~~~dl~ml~~~--~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
+| +++|+|-++..+.+-.... +.+ ....+..++.- +|+++ ...+++.+++.|+.+..+...
T Consensus 117 ~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~-l~~~~~~~~~~g~~v~sl~~~ 184 (213)
T 1lh0_A 117 QG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGE-ISAIQEVERDYGCKVISIITL 184 (213)
T ss_dssp CS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSS-SBHHHHHHHHHCCEEEEEEEH
T ss_pred CC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccc-hhhHHHHHHHcCCCeEEEEEH
Confidence 57 8888888887554321000 000 01112222211 23322 345666777778777666544
No 327
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=23.31 E-value=55 Score=19.28 Aligned_cols=22 Identities=14% Similarity=-0.088 Sum_probs=18.2
Q ss_pred eecCHHHHHHHHHHcCCceeEE
Q 040309 65 KERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v 86 (100)
.-.+.++-+++|+++||++...
T Consensus 80 ~G~~~~~A~~~L~~~Gl~v~~~ 101 (139)
T 2kuf_A 80 SGMFWVDAEPRLRALGWTGMLD 101 (139)
T ss_dssp CSCCHHHHHHHHHHHTCCSCEE
T ss_pred CCCCHHHHHHHHHHcCCceeeE
Confidence 4468999999999999987543
No 328
>3htu_A Vacuolar protein-sorting-associated protein 25; ESCRT-II, ESCRT-III, VPS20, VPS25, MVB, cytoplasm, nucleus, polymorphism, protein transport; 2.00A {Homo sapiens}
Probab=23.23 E-value=50 Score=18.26 Aligned_cols=19 Identities=26% Similarity=0.545 Sum_probs=11.9
Q ss_pred ceecCHHHHHHHH----HHcCCc
Q 040309 64 GKERSVDDWKKLF----LAAGFS 82 (100)
Q Consensus 64 g~~rt~~e~~~ll----~~aGf~ 82 (100)
.-.||++||.+++ ++.|..
T Consensus 2 ~~WrspeeWa~~Iy~Wv~~~G~~ 24 (79)
T 3htu_A 2 AMGRRPEEWGKLIYQWVSRSGQN 24 (79)
T ss_dssp ---CCHHHHHHHHHHHHHTTCCS
T ss_pred CCcCCHHHHHHHHHHHHHHcCCC
Confidence 3468999997655 566754
No 329
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=22.96 E-value=74 Score=17.74 Aligned_cols=28 Identities=14% Similarity=0.071 Sum_probs=20.4
Q ss_pred cccCceecCHHHHHHHHHHcCCceeEEE
Q 040309 60 SLFRGKERSVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 60 ~~~~g~~rt~~e~~~ll~~aGf~~~~v~ 87 (100)
+.+|.-..+.+|+.+++++.|-++..-+
T Consensus 14 v~TG~l~~~R~e~~~~i~~~Gg~v~~sV 41 (92)
T 1l7b_A 14 VITGELSRPREEVKALLRRLGAKVTDSV 41 (92)
T ss_dssp ECSTTTTSCHHHHHHHHHHTTCEEESCC
T ss_pred EEecCCCCCHHHHHHHHHHcCCEEeCcc
Confidence 3445333489999999999998876543
No 330
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=22.77 E-value=82 Score=15.63 Aligned_cols=20 Identities=10% Similarity=-0.215 Sum_probs=15.9
Q ss_pred cCHHHHHHHHHHcCCceeEE
Q 040309 67 RSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~~v 86 (100)
-+.++..+.++++||+...+
T Consensus 51 ~~~~~i~~~i~~~Gy~~~~~ 70 (73)
T 1cc8_A 51 LPYDFILEKIKKTGKEVRSG 70 (73)
T ss_dssp SCHHHHHHHHHTTSSCEEEE
T ss_pred CCHHHHHHHHHHhCCCceee
Confidence 46789999999999986443
No 331
>3czq_A Putative polyphosphate kinase 2; structural genomics, APC6299, PSI-2, structure initiative; HET: MSE GOL; 2.23A {Sinorhizobium meliloti}
Probab=22.59 E-value=48 Score=22.99 Aligned_cols=22 Identities=14% Similarity=0.466 Sum_probs=16.8
Q ss_pred HHHHHHHhCCCCCCCcEEEEEeeec
Q 040309 14 LLKKCKEAIPSKDEGGKVIIIDMAI 38 (100)
Q Consensus 14 iL~~~~~al~~~~pgg~lli~e~v~ 38 (100)
+|.+..++|+ ..|.++|+|--.
T Consensus 132 yl~R~~~~LP---~~G~IvIfDRsw 153 (304)
T 3czq_A 132 YFQRYVATFP---TAGEFVLFDRSW 153 (304)
T ss_dssp TTHHHHTTCC---CTTCEEEEEECG
T ss_pred HHHHHHHhcc---cCCeEEEEECCc
Confidence 5677888888 688888888543
No 332
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=22.38 E-value=86 Score=17.86 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=18.3
Q ss_pred cccccCceecC-HHHHHHHHHHcCCc
Q 040309 58 MVSLFRGKERS-VDDWKKLFLAAGFS 82 (100)
Q Consensus 58 ml~~~~g~~rt-~~e~~~ll~~aGf~ 82 (100)
..+.|.+..|+ .......|++.||+
T Consensus 74 ivvyC~~g~r~~s~~a~~~L~~~G~~ 99 (124)
T 3flh_A 74 YVVYDWTGGTTLGKTALLVLLSAGFE 99 (124)
T ss_dssp EEEECSSSSCSHHHHHHHHHHHHTCE
T ss_pred EEEEeCCCCchHHHHHHHHHHHcCCe
Confidence 45567766776 56677788999996
No 333
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=22.24 E-value=1.4e+02 Score=19.74 Aligned_cols=16 Identities=31% Similarity=0.528 Sum_probs=11.1
Q ss_pred CCcEEEEEeeecCCCC
Q 040309 27 EGGKVIIIDMAIENQS 42 (100)
Q Consensus 27 pgg~lli~e~v~~~~~ 42 (100)
+|-++||+|-++....
T Consensus 148 ~Gk~VLIVDDvitTG~ 163 (243)
T 3dez_A 148 KGQKMVIIEDLISTGG 163 (243)
T ss_dssp TTCEEEEEEEEESSSH
T ss_pred CCCEEEEEEeeccccH
Confidence 5677888887776543
No 334
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=22.19 E-value=75 Score=15.46 Aligned_cols=19 Identities=16% Similarity=0.123 Sum_probs=15.4
Q ss_pred ecCHHHHHHHHHHcCCcee
Q 040309 66 ERSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~~ 84 (100)
.-+.++..+.++++||+..
T Consensus 49 ~~~~~~i~~~i~~~Gy~~~ 67 (69)
T 4a4j_A 49 ETTPQILTDAVERAGYHAR 67 (69)
T ss_dssp TCCHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHcCCceE
Confidence 3478899999999999753
No 335
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=22.15 E-value=1.8e+02 Score=22.82 Aligned_cols=24 Identities=13% Similarity=0.135 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHcCCceeEEEecCC
Q 040309 68 SVDDWKKLFLAAGFSHYKITPILG 91 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~~~~ 91 (100)
|.+|+.+.|..+||++..+.+...
T Consensus 17 ~~~~l~~~lt~~GlEVe~v~~~~~ 40 (795)
T 2rhq_B 17 KVEDLAERITRTGIEVDNMIDYSK 40 (795)
T ss_dssp CHHHHHHHHHHTTCEEEEEEETTT
T ss_pred CHHHHHHHHHhcCccceEEEeccc
Confidence 899999999999999999998864
No 336
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=22.09 E-value=42 Score=20.87 Aligned_cols=24 Identities=0% Similarity=0.062 Sum_probs=16.5
Q ss_pred HHHHHHHHHHh--CCCCCCCcEEEEEeee
Q 040309 11 SVKLLKKCKEA--IPSKDEGGKVIIIDMA 37 (100)
Q Consensus 11 ~~~iL~~~~~a--l~~~~pgg~lli~e~v 37 (100)
..++++.+.+. |+ |||.+++....
T Consensus 137 ~~~~l~~l~~~~~L~---pgG~l~i~~~~ 162 (202)
T 2fpo_A 137 LEETINLLEDNGWLA---DEALIYVESEV 162 (202)
T ss_dssp HHHHHHHHHHTTCEE---EEEEEEEEEEG
T ss_pred HHHHHHHHHhcCccC---CCcEEEEEECC
Confidence 35667777654 88 89988776544
No 337
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=21.79 E-value=88 Score=20.76 Aligned_cols=32 Identities=3% Similarity=-0.201 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHcCCceeEEEe---cCCcceEEEEe
Q 040309 68 SVDDWKKLFLAAGFSHYKITP---ILGVRSLIEAY 99 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~~v~~---~~~~~~vie~~ 99 (100)
.....++||.+.||.+.+..- -+-++-+|.+.
T Consensus 128 ~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 128 AAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp CHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEE
T ss_pred ChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 588999999999999876432 23356777664
No 338
>2e8m_A Epidermal growth factor receptor kinase substrate 8; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.75 E-value=31 Score=20.04 Aligned_cols=23 Identities=17% Similarity=0.394 Sum_probs=18.2
Q ss_pred ecCHHHHHHHHHHcCCceeEEEe
Q 040309 66 ERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
.-|.+|.++||.+-||....+..
T Consensus 33 ~Ssp~EV~~WL~~kgFS~~tv~~ 55 (99)
T 2e8m_A 33 DSTPEDVKTWLQSKGFNPVTVNS 55 (99)
T ss_dssp TCCTTHHHHHHHHHTCCHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCHHHHHH
Confidence 45889999999999998754433
No 339
>2joe_A Hypothetical lipoprotein YEHR; six antiparallel beta strands, alpha + beta sandwich, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: d.371.1.1
Probab=21.74 E-value=70 Score=19.49 Aligned_cols=23 Identities=26% Similarity=0.375 Sum_probs=19.4
Q ss_pred ceecCHHHHHHHHHHcCCceeEE
Q 040309 64 GKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 64 g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
++--|.++-...|+++||+.++.
T Consensus 110 ~k~iS~k~t~k~Lk~~Gfke~~~ 132 (139)
T 2joe_A 110 KKGITMAQMELVMKAAGFKEVKL 132 (139)
T ss_dssp HHCCBHHHHHHHHHHTTCCEEET
T ss_pred cCccCHHHHHHHHHHCCCeeecc
Confidence 44568999999999999998764
No 340
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=21.59 E-value=68 Score=18.96 Aligned_cols=46 Identities=17% Similarity=0.299 Sum_probs=30.8
Q ss_pred HHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCceeEE
Q 040309 13 KLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 13 ~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
+|+.++. +++ .|.++.|.-++.. ++-.+.++.-+++.+.||..++|
T Consensus 8 qivd~il-~~~---egtri~iLAPvv~------------------------~rKg~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 8 QMVDRLL-SYP---ERTKMQILAPIVS------------------------GKKGTHAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHH-TSC---TTCEEEEEEEEEE------------------------EECSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHH-hCC---CCCEEEEEEEEee------------------------CCCCcHHHHHHHHHhCCCeEEEE
Confidence 4555544 355 6788887776643 23335567778888999999887
No 341
>2lxi_A RNA-binding protein 10; NMR {Homo sapiens}
Probab=21.53 E-value=40 Score=18.21 Aligned_cols=23 Identities=13% Similarity=0.231 Sum_probs=17.9
Q ss_pred ceecCHHHHHHHHHHcCCceeEE
Q 040309 64 GKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 64 g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
...-|.++++++|++.|.++..+
T Consensus 10 p~~~te~~l~~~F~~~G~~v~~v 32 (91)
T 2lxi_A 10 PQAATEDDIRGQLQSHGVQAREV 32 (91)
T ss_dssp CSSCCHHHHHHHHHHHTCCCSBC
T ss_pred CCCCCHHHHHHHHHHhCCEeEEE
Confidence 34568999999999999665554
No 342
>2f3n_A SH3 and multiple ankyrin repeat domains 3; postsynaptic density, SAM domain, shank, scaffolding protein, structural protein; 2.10A {Rattus norvegicus} SCOP: a.60.1.2 PDB: 2f44_A
Probab=21.48 E-value=67 Score=17.01 Aligned_cols=18 Identities=11% Similarity=-0.121 Sum_probs=13.7
Q ss_pred ecCHHHHHHHHHHcCCce
Q 040309 66 ERSVDDWKKLFLAAGFSH 83 (100)
Q Consensus 66 ~rt~~e~~~ll~~aGf~~ 83 (100)
..|.++...||+..||..
T Consensus 4 ~Ws~~~V~~WL~~lgl~~ 21 (76)
T 2f3n_A 4 LWSKFDVGDWLESIHLGE 21 (76)
T ss_dssp GCCHHHHHHHHHHTTCGG
T ss_pred hCCHHHHHHHHHHCCCHH
Confidence 467788888888888763
No 343
>3mf7_A CIS-3-chloroacrylic acid dehalogenase; beta-alpha-beta motif, tautomerase, CIS-3-CHLO acid dehalogenase, isomerase, hydrolase; HET: PR4; 1.65A {Coryneform bacterium} PDB: 3mf8_A 2flt_A 2flz_A
Probab=21.19 E-value=90 Score=19.03 Aligned_cols=67 Identities=12% Similarity=-0.036 Sum_probs=36.3
Q ss_pred cCChHHHHHHHHHHHHhCC----CCCCCcEEEEEeeecCCCCCCchhhhhhh--hhhhhcccccCceecCHHHHHHHHH
Q 040309 5 NWNDEESVKLLKKCKEAIP----SKDEGGKVIIIDMAIENQSQDKESMETQL--CFDILMVSLFRGKERSVDDWKKLFL 77 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~----~~~pgg~lli~e~v~~~~~~~~~~~~~~~--~~dl~ml~~~~g~~rt~~e~~~ll~ 77 (100)
-.++++-.+|.+.+.+++. .| +.-..+++..+-+++-- ..+. .-++.++...-+.-||.++.+++.+
T Consensus 11 ~~t~eqK~aLa~~It~a~~e~~~vP-~~~v~Vif~e~~~~~~~-----~gG~~rsd~~v~I~i~~~~GRt~eqK~~L~~ 83 (149)
T 3mf7_A 11 RLTPSAKHAVAKAITDAHRGLTGTQ-HFLAQVNFQEQPAGNVF-----LGGVQQGGDTIFVHGLHREGRSADLKGQLAQ 83 (149)
T ss_dssp TSCHHHHHHHHHHHHHHHHHTCCTT-CCCCEEEEEEECTTCCE-----ETTEECCSCCEEEEEEEESCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCcC-hHHEEEEEEEcCccceE-----ECCEEcCCCEEEEEEEecCCCCHHHHHHHHH
Confidence 3678888888888876543 23 44555545544333211 0011 1133333333355789999888875
No 344
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=21.04 E-value=73 Score=23.46 Aligned_cols=25 Identities=24% Similarity=0.575 Sum_probs=20.4
Q ss_pred cCceecCHHHHHHHHHHcCCceeEE
Q 040309 62 FRGKERSVDDWKKLFLAAGFSHYKI 86 (100)
Q Consensus 62 ~~g~~rt~~e~~~ll~~aGf~~~~v 86 (100)
++......++|.+++++||++-+-+
T Consensus 57 F~p~~fd~~~W~~~~k~aGakyvvl 81 (478)
T 3ues_A 57 FNPRNVDVDQWMDALVAGGMAGVIL 81 (478)
T ss_dssp CCCSSCCHHHHHHHHHHTTCSEEEE
T ss_pred CCcccCCHHHHHHHHHHcCCCEEEE
Confidence 4556679999999999999987544
No 345
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=21.00 E-value=71 Score=16.03 Aligned_cols=17 Identities=35% Similarity=0.475 Sum_probs=15.0
Q ss_pred CHHHHHHHHHHcCCcee
Q 040309 68 SVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 68 t~~e~~~ll~~aGf~~~ 84 (100)
+.+++.+.++++||+..
T Consensus 50 ~~~~i~~~i~~~Gy~~~ 66 (73)
T 3fry_A 50 DVDKYIKAVEAAGYQAK 66 (73)
T ss_dssp GHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCceE
Confidence 78899999999999864
No 346
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=20.88 E-value=98 Score=22.66 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=19.6
Q ss_pred cCceecCHHHHHHHHHHcCCceeEEEec
Q 040309 62 FRGKERSVDDWKKLFLAAGFSHYKITPI 89 (100)
Q Consensus 62 ~~g~~rt~~e~~~ll~~aGf~~~~v~~~ 89 (100)
+.|.++|.+|..+++++.|-+.+++.-+
T Consensus 7 ~~~~~~T~edv~~~i~~~~I~~V~l~f~ 34 (486)
T 4acf_A 7 HHGTEKTPDDVFKLAKDEKVEYVDVRFC 34 (486)
T ss_dssp -----CCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cccccCCHHHHHHHHHHCCCcEEEEEEE
Confidence 4699999999999999999887776543
No 347
>3ubm_A COAT2, formyl-COA:oxalate COA-transferase; HET: COA; 1.99A {Acetobacter aceti}
Probab=20.83 E-value=55 Score=23.91 Aligned_cols=23 Identities=0% Similarity=-0.101 Sum_probs=19.2
Q ss_pred eecCHHHHHHHHHHcCCceeEEE
Q 040309 65 KERSVDDWKKLFLAAGFSHYKIT 87 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v~ 87 (100)
+.||.+||.++|+++|.-...|.
T Consensus 356 ~~~t~~ew~~~l~~~~vp~~pV~ 378 (456)
T 3ubm_A 356 ADKTKYEAVAHLAKYRVPCSPVL 378 (456)
T ss_dssp TTSCHHHHHHHHHHTTCCEEECC
T ss_pred hcCCHHHHHHHHHhcCCCeEEeC
Confidence 56899999999999997766654
No 348
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=20.69 E-value=2.2e+02 Score=19.72 Aligned_cols=73 Identities=12% Similarity=0.046 Sum_probs=37.8
Q ss_pred cCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhh-hhcccccCceecCHHHHHHHHHHcCCce
Q 040309 5 NWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFD-ILMVSLFRGKERSVDDWKKLFLAAGFSH 83 (100)
Q Consensus 5 dw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~d-l~ml~~~~g~~rt~~e~~~ll~~aGf~~ 83 (100)
-|+.++++++++.+.+ . +-+..+|=|.+.+++ .. ....+.. ..+-+..+-..++..+++.+++.-....
T Consensus 197 ~~~~~~A~~~~~~L~~--~---~~~i~~iEeP~~~~d-~~----~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~ 266 (365)
T 3ik4_A 197 GYDVERALAFCAACKA--E---SIPMVLFEQPLPRED-WA----GMAQVTAQSGFAVAADESARSAHDVLRIAREGTASV 266 (365)
T ss_dssp CCCHHHHHHHHHHHHH--T---TCCEEEEECCSCTTC-HH----HHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSE
T ss_pred CCCHHHHHHHHHHHhh--C---CCCceEEECCCCccc-HH----HHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCE
Confidence 4788888888777643 3 333333333332211 10 1111111 1122233445678888888888776666
Q ss_pred eEEE
Q 040309 84 YKIT 87 (100)
Q Consensus 84 ~~v~ 87 (100)
+++.
T Consensus 267 v~ik 270 (365)
T 3ik4_A 267 INIK 270 (365)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6553
No 349
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=20.50 E-value=39 Score=22.76 Aligned_cols=18 Identities=28% Similarity=0.377 Sum_probs=14.5
Q ss_pred HHHHHhCCCCCCCcEEEEEee
Q 040309 16 KKCKEAIPSKDEGGKVIIIDM 36 (100)
Q Consensus 16 ~~~~~al~~~~pgg~lli~e~ 36 (100)
+++.+.|+ |||++++...
T Consensus 159 ~~~~~~Lk---pgG~lvi~~~ 176 (317)
T 1dl5_A 159 ETWFTQLK---EGGRVIVPIN 176 (317)
T ss_dssp HHHHHHEE---EEEEEEEEBC
T ss_pred HHHHHhcC---CCcEEEEEEC
Confidence 46778899 9999999753
No 350
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=20.49 E-value=1.9e+02 Score=20.10 Aligned_cols=28 Identities=4% Similarity=-0.085 Sum_probs=20.5
Q ss_pred ccCceecCHHHHHHHHHHcCCceeEEEe
Q 040309 61 LFRGKERSVDDWKKLFLAAGFSHYKITP 88 (100)
Q Consensus 61 ~~~g~~rt~~e~~~ll~~aGf~~~~v~~ 88 (100)
..+...++..+++.+++.-....+.+..
T Consensus 249 a~dE~~~~~~~~~~~i~~~~~d~v~~k~ 276 (383)
T 3i4k_A 249 MADESVWTPAEALAVVKAQAADVIALKT 276 (383)
T ss_dssp EESTTCSSHHHHHHHHHHTCCSEEEECT
T ss_pred EecCccCCHHHHHHHHHcCCCCEEEEcc
Confidence 3456678899999999877777666543
No 351
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=20.45 E-value=59 Score=20.28 Aligned_cols=57 Identities=14% Similarity=0.349 Sum_probs=33.5
Q ss_pred ccCChHHHHHHHHHHHHhCCCCCCCcEEEEEeeecCCCCCCchhhhhhhhhhhhcccccCceecCHHHHHHHHHHcCCce
Q 040309 4 HNWNDEESVKLLKKCKEAIPSKDEGGKVIIIDMAIENQSQDKESMETQLCFDILMVSLFRGKERSVDDWKKLFLAAGFSH 83 (100)
Q Consensus 4 Hdw~d~~~~~iL~~~~~al~~~~pgg~lli~e~v~~~~~~~~~~~~~~~~~dl~ml~~~~g~~rt~~e~~~ll~~aGf~~ 83 (100)
.||......+|.+++. .++ +|+.||++|.. . .. .....++-..|++.||+.
T Consensus 129 ~Dw~~~~~~~i~~~~~-~~~---~g~IiL~Hd~~------~----~t---------------~~al~~ii~~l~~~Gy~~ 179 (195)
T 2cc0_A 129 QDWNNASTDAIVQAVS-RLG---NGQVILMHDWP------A----NT---------------LAAIPRIAQTLAGKGLCS 179 (195)
T ss_dssp CGGGTCCHHHHHHHHH-TCC---TTCEEEEESSC------H----HH---------------HHHHHHHHHHHHHTTEEE
T ss_pred CccCCCCHHHHHHHHh-CcC---cCeEEEECCCc------h----hH---------------HHHHHHHHHHHHHCCCEE
Confidence 3565444556666663 456 78888887631 0 00 012445666777889888
Q ss_pred eEEEec
Q 040309 84 YKITPI 89 (100)
Q Consensus 84 ~~v~~~ 89 (100)
+.+.+.
T Consensus 180 v~l~~~ 185 (195)
T 2cc0_A 180 GMISPQ 185 (195)
T ss_dssp CEECTT
T ss_pred EEeCcc
Confidence 776544
No 352
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=20.07 E-value=72 Score=15.04 Aligned_cols=18 Identities=6% Similarity=0.038 Sum_probs=14.1
Q ss_pred cCHHHHHHHHHHcCCcee
Q 040309 67 RSVDDWKKLFLAAGFSHY 84 (100)
Q Consensus 67 rt~~e~~~ll~~aGf~~~ 84 (100)
-+.++..+.++.+||+..
T Consensus 49 ~~~~~i~~~i~~~G~~~~ 66 (68)
T 1cpz_A 49 VQATEICQAINELGYQAE 66 (68)
T ss_dssp CCHHHHHHHHHTTSSCEE
T ss_pred CCHHHHHHHHHHcCCCcc
Confidence 356788888999999753
No 353
>1jl0_A Adometdc, S-adenosylmethionine decarboxylase proenzyme; spermidine biosynthesis, lyase, pyruvate, sandwich, allosteric enzyme, pyruvoyl; 1.50A {Homo sapiens} SCOP: d.156.1.1 PDB: 1msv_A 1i7b_A* 1i79_A* 1i72_A* 1i7c_A* 1i7m_A* 3dz6_A* 3dz2_A* 3dz5_A* 3dz4_A* 3dz7_A* 3h0w_A* 3h0v_A* 1jen_A 3dz3_A* 3ep9_A 3ep6_A* 3ep3_A* 3ep8_A* 3ep5_A* ...
Probab=20.03 E-value=1.3e+02 Score=21.14 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=22.9
Q ss_pred eecCHHHHHHHHHHcCCceeEEEecCC
Q 040309 65 KERSVDDWKKLFLAAGFSHYKITPILG 91 (100)
Q Consensus 65 ~~rt~~e~~~ll~~aGf~~~~v~~~~~ 91 (100)
|.-+.++|.++|+.|+-+++.......
T Consensus 33 R~i~~~~w~~~L~~a~C~IlS~~sn~~ 59 (334)
T 1jl0_A 33 RTIPRSEWDILLKDVQCSIISVTKTDK 59 (334)
T ss_dssp GGSCHHHHHHHHHTTTCCEEEEEECSS
T ss_pred ccCCHHHHHHHHHhcCCEEEEeecccc
Confidence 556899999999999999998876543
Done!