BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040310
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis
thaliana GN=ACA1 PE=1 SV=3
Length = 1020
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/58 (75%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
Query: 1 MEYYLNENFGFVKQKKS-EEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIRRAN 57
ME YLNENFG VK K S +EAL+RWR L VKN KRRFRFTANL+KRSEAEAIRR+N
Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSN 58
>sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza
sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1
Length = 1020
Score = 83.2 bits (204), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/58 (72%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 1 MEYYLNENFGFVKQKKS-EEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIRRAN 57
ME YL ENFG VK K S EEAL RWR L G VKN KRRFRFTANL KR EA+AI+ AN
Sbjct: 1 MESYLEENFGGVKAKNSSEEALRRWRKLCGVVKNPKRRFRFTANLDKRGEAQAIKHAN 58
>sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1
Length = 1014
Score = 81.6 bits (200), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/57 (66%), Positives = 42/57 (73%)
Query: 1 MEYYLNENFGFVKQKKSEEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIRRAN 57
ME YLNENF + SEE LE+WR L G VKN KRRFRFTANL+KR EA A+RR N
Sbjct: 1 MESYLNENFDVKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTN 57
>sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2
Length = 1015
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/57 (63%), Positives = 40/57 (70%)
Query: 1 MEYYLNENFGFVKQKKSEEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIRRAN 57
ME YLN NF + SEE LE+WR L VKN KRRFRFTANL+KR EA A+RR N
Sbjct: 1 MESYLNSNFDVKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTN 57
>sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type
OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3
SV=1
Length = 1039
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 1 MEYYLNENFGFVKQKKSEEALERWRILSG-FVKNRKRRFRFTANLAKRSEAEAIRRAN-- 57
++ YL ENF + SEEA RWR G VKNR+RRFR+ +L +RS +A R+
Sbjct: 4 LDRYLQENFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLERRSLDKAKVRSTQE 63
Query: 58 -LAVNLFFRRERLIEPEILNNQHSDGLIKA--KMLTNQHEPKNPIGQDQLSLTKKVNKPK 114
+ V L+ ++ LI SDG K K+ + + I D+L+L + K
Sbjct: 64 KIRVALYVQQAALI--------FSDGAKKKEYKLTGDIIKAGYAINPDELALITSKHDSK 115
Query: 115 A 115
A
Sbjct: 116 A 116
>sp|Q8RUN1|ACA3_ORYSJ Calcium-transporting ATPase 3, plasma membrane-type OS=Oryza
sativa subsp. japonica GN=Os01g0939100 PE=2 SV=1
Length = 1043
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 1 MEYYLNENFGFVKQKKSEEALERWRILSG-FVKNRKRRFRFTANLAKRSEAEAIRRA--- 56
ME+ ++F + SEEA RWR G VKNR+RRFR +L KRS+AE RR
Sbjct: 9 MEFL--KSFEVPAKNPSEEAQRRWRDAVGTLVKNRRRRFRMVPDLDKRSQAETQRRKIQE 66
Query: 57 NLAVNLFFRRERL 69
L V LF ++ L
Sbjct: 67 KLRVALFVQKAAL 79
>sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type
OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3
SV=1
Length = 1017
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 1 MEYYLNENFGFVKQKKSEEALERWRILSG-FVKNRKRRFRFTANLAKRSEAEAIRRAN-- 57
++ YL E+F + SEEA RWR G VKNR+RRFR+ +L +RS +A R+
Sbjct: 4 LDRYLQEHFDVPAKNPSEEAQRRWRQAVGTIVKNRRRRFRWVPDLDRRSLDKAKVRSTQE 63
Query: 58 -LAVNLFFRRERLI----EPEILNNQHSDGLIK 85
+ V L+ ++ LI E ++ ++H +K
Sbjct: 64 KIRVALYVQQAALIFSDDELALITSKHDSKALK 96
>sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1
Length = 1025
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 5 LNENFGFVKQKKSEEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIR 54
L ++F + S EA +RWR G VKNR RRFR +NL K +E E R
Sbjct: 4 LLKDFEVASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKR 53
>sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1
Length = 1030
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 5 LNENFGFVKQKKSEEALERWRILSGFVKNRKRRFRFTANLAKRSEAE 51
L +F + S EA +RWR VKNR RRFR +L K ++ E
Sbjct: 4 LLRDFEVEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYE 50
>sp|Q9LF79|ACA8_ARATH Calcium-transporting ATPase 8, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA8 PE=1 SV=1
Length = 1074
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 6 NENFGFVKQKKSEEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIRR-------ANL 58
++ F + S E L++WR + V N RRFR+T +L K E +R+ A L
Sbjct: 29 SDTFYIPSKNASIERLQQWR-KAALVLNASRRFRYTLDLKKEQETREMRQKIRSHAHALL 87
Query: 59 AVNLFFRRER 68
A N F R
Sbjct: 88 AANRFMDMGR 97
>sp|Q9SZR1|ACA10_ARATH Calcium-transporting ATPase 10, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA10 PE=1 SV=2
Length = 1069
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 12/51 (23%)
Query: 19 EALERWRILSGFVKNRKRRFRFTANLAK-----------RSEAEAIRRANL 58
E L RWR + V N RRFR+T +L + R+ A+AIR A+L
Sbjct: 42 ERLRRWR-QAALVLNASRRFRYTLDLKREEDKKQMLRKMRAHAQAIRAAHL 91
>sp|Q9LU41|ACA9_ARATH Calcium-transporting ATPase 9, plasma membrane-type
OS=Arabidopsis thaliana GN=ACA9 PE=2 SV=2
Length = 1086
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 14 QKKSEEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIRR 55
+ S E+L RWR + V N RRFR+T +L K + RR
Sbjct: 51 KNASVESLRRWR-QAALVLNASRRFRYTLDLNKEEHYDNRRR 91
>sp|Q2IW53|GLMU_RHOP2 Bifunctional protein GlmU OS=Rhodopseudomonas palustris (strain
HaA2) GN=glmU PE=3 SV=1
Length = 452
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Query: 2 EYYLNENFGFVKQKKSEEALERWRILSGFVKNRKRRFRFTANLAKRSEAEAIRRANLAVN 61
EYYL + G V+++ +++G ++ + R A+ +EAEA+ +A L
Sbjct: 199 EYYLTDAVGIVRERG---------LVAGVIETDEDEVRGINTKAQLAEAEAVMQARLRQA 249
Query: 62 LFFRRERLIEPEILN 76
LI PE ++
Sbjct: 250 AMAAGVTLISPETIH 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,838,676
Number of Sequences: 539616
Number of extensions: 1625894
Number of successful extensions: 4448
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4421
Number of HSP's gapped (non-prelim): 37
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)