Query 040311
Match_columns 229
No_of_seqs 204 out of 2174
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 07:11:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040311.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040311hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 1.5E-34 3.2E-39 244.6 19.1 208 12-229 25-236 (336)
2 PRK10162 acetyl esterase; Prov 99.9 2.7E-25 5.9E-30 189.3 16.4 164 50-228 55-221 (318)
3 COG0657 Aes Esterase/lipase [L 99.9 2.9E-25 6.4E-30 188.5 15.8 157 57-226 58-215 (312)
4 PF07859 Abhydrolase_3: alpha/ 99.9 1.7E-24 3.7E-29 173.5 11.3 135 85-228 1-140 (211)
5 PF00135 COesterase: Carboxyle 99.8 1.2E-18 2.7E-23 157.4 11.2 128 59-200 105-243 (535)
6 COG2272 PnbA Carboxylesterase 99.8 1.8E-18 3.9E-23 150.3 11.0 114 57-180 74-200 (491)
7 cd00312 Esterase_lipase Estera 99.8 3.7E-18 7.9E-23 153.5 11.3 129 58-202 74-213 (493)
8 KOG4388 Hormone-sensitive lipa 99.7 1.4E-16 3E-21 139.6 9.9 137 80-225 394-532 (880)
9 KOG4627 Kynurenine formamidase 99.7 5.5E-17 1.2E-21 126.0 6.3 135 48-207 41-177 (270)
10 PF10340 DUF2424: Protein of u 99.7 9.9E-16 2.1E-20 130.8 13.6 133 80-225 120-262 (374)
11 PLN00021 chlorophyllase 99.6 6.3E-14 1.4E-18 119.0 15.6 140 50-204 24-168 (313)
12 COG1506 DAP2 Dipeptidyl aminop 99.5 1.6E-13 3.4E-18 126.7 15.4 131 50-202 363-507 (620)
13 TIGR01840 esterase_phb esteras 99.5 7.2E-14 1.6E-18 112.3 10.7 114 66-201 2-129 (212)
14 TIGR03101 hydr2_PEP hydrolase, 99.5 2.2E-13 4.7E-18 113.0 13.0 113 80-211 23-143 (266)
15 PLN02298 hydrolase, alpha/beta 99.5 2.8E-13 6E-18 115.8 13.8 133 49-205 29-172 (330)
16 KOG1516 Carboxylesterase and r 99.5 9.5E-14 2.1E-18 126.5 10.0 117 57-181 91-216 (545)
17 PRK05077 frsA fermentation/res 99.5 2.5E-12 5.5E-17 113.3 16.0 127 52-203 168-301 (414)
18 PRK10115 protease 2; Provision 99.5 2.1E-12 4.4E-17 120.3 15.4 137 49-206 413-563 (686)
19 PRK10985 putative hydrolase; P 99.4 3.7E-12 8E-17 108.8 14.7 157 17-204 4-170 (324)
20 PHA02857 monoglyceride lipase; 99.4 2.3E-12 5E-17 107.1 12.6 115 61-204 11-134 (276)
21 PLN02385 hydrolase; alpha/beta 99.4 4.6E-12 9.9E-17 109.3 14.6 116 63-203 74-198 (349)
22 KOG4389 Acetylcholinesterase/B 99.4 1.2E-12 2.5E-17 113.5 10.4 112 59-180 117-238 (601)
23 PF12740 Chlorophyllase2: Chlo 99.4 2.6E-12 5.6E-17 105.0 12.0 126 63-203 4-132 (259)
24 PRK13604 luxD acyl transferase 99.4 5E-12 1.1E-16 106.1 13.8 127 52-205 9-144 (307)
25 PF10503 Esterase_phd: Esteras 99.4 1.5E-12 3.2E-17 104.8 9.8 115 63-198 1-127 (220)
26 TIGR02821 fghA_ester_D S-formy 99.4 1.4E-11 3E-16 103.0 16.0 124 62-205 26-176 (275)
27 PRK10566 esterase; Provisional 99.4 1.1E-11 2.3E-16 101.6 13.9 106 62-183 11-130 (249)
28 PLN02511 hydrolase 99.4 1.5E-11 3.4E-16 107.6 15.1 160 16-203 43-211 (388)
29 KOG1552 Predicted alpha/beta h 99.4 1.2E-11 2.5E-16 100.0 12.0 106 80-207 58-168 (258)
30 COG2267 PldB Lysophospholipase 99.3 1.7E-11 3.7E-16 103.5 12.9 119 62-205 21-145 (298)
31 KOG2564 Predicted acetyltransf 99.3 1.6E-11 3.5E-16 99.9 11.8 110 52-181 50-167 (343)
32 KOG4391 Predicted alpha/beta h 99.3 1E-11 2.2E-16 97.7 9.3 133 47-204 49-186 (300)
33 PLN02652 hydrolase; alpha/beta 99.3 5.6E-11 1.2E-15 104.1 14.9 118 62-205 122-248 (395)
34 TIGR03100 hydr1_PEP hydrolase, 99.3 7.1E-11 1.5E-15 98.6 14.4 116 63-204 14-136 (274)
35 PRK10749 lysophospholipase L2; 99.3 8E-11 1.7E-15 100.8 14.4 102 81-204 53-168 (330)
36 PRK00870 haloalkane dehalogena 99.3 1.6E-10 3.5E-15 97.5 15.6 124 51-201 20-149 (302)
37 PF05448 AXE1: Acetyl xylan es 99.3 8E-11 1.7E-15 100.2 12.9 129 48-203 52-210 (320)
38 KOG1838 Alpha/beta hydrolase [ 99.3 5.5E-10 1.2E-14 96.3 17.6 163 17-202 66-236 (409)
39 PF12695 Abhydrolase_5: Alpha/ 99.3 7.2E-11 1.6E-15 88.3 10.9 94 84-202 1-95 (145)
40 PF00326 Peptidase_S9: Prolyl 99.3 1.5E-11 3.2E-16 98.7 7.1 90 106-210 6-107 (213)
41 PLN02442 S-formylglutathione h 99.2 2.6E-10 5.7E-15 95.7 14.6 125 61-205 30-181 (283)
42 KOG1455 Lysophospholipase [Lip 99.2 2.3E-10 4.9E-15 94.5 13.8 122 62-207 39-169 (313)
43 TIGR00976 /NonD putative hydro 99.2 7.6E-11 1.6E-15 107.7 12.2 123 60-205 6-135 (550)
44 PF07224 Chlorophyllase: Chlor 99.2 1.3E-10 2.8E-15 94.0 11.8 126 62-205 32-160 (307)
45 PLN02894 hydrolase, alpha/beta 99.2 2.9E-10 6.3E-15 100.0 12.9 107 80-202 103-211 (402)
46 PF12697 Abhydrolase_6: Alpha/ 99.2 5.4E-10 1.2E-14 88.3 12.8 97 85-204 1-103 (228)
47 COG4099 Predicted peptidase [G 99.2 9.8E-11 2.1E-15 96.1 8.0 124 61-201 172-303 (387)
48 cd00707 Pancreat_lipase_like P 99.2 5.4E-10 1.2E-14 93.4 12.4 106 80-202 34-147 (275)
49 PF12715 Abhydrolase_7: Abhydr 99.2 8.6E-11 1.9E-15 100.4 7.6 134 48-202 84-259 (390)
50 KOG4409 Predicted hydrolase/ac 99.2 1.6E-10 3.4E-15 97.1 8.8 110 80-205 88-198 (365)
51 TIGR03695 menH_SHCHC 2-succiny 99.1 5.4E-10 1.2E-14 89.6 11.0 102 83-203 2-106 (251)
52 PLN02824 hydrolase, alpha/beta 99.1 2.1E-09 4.7E-14 90.2 14.7 98 82-202 29-137 (294)
53 TIGR01250 pro_imino_pep_2 prol 99.1 1.3E-09 2.7E-14 89.7 13.1 101 81-202 24-131 (288)
54 COG3458 Acetyl esterase (deace 99.1 3.4E-10 7.4E-15 91.9 8.9 131 47-204 51-212 (321)
55 PLN02211 methyl indole-3-aceta 99.1 1.6E-09 3.5E-14 90.4 12.3 101 80-202 16-122 (273)
56 COG0412 Dienelactone hydrolase 99.1 3.4E-09 7.5E-14 86.6 13.7 123 54-203 4-147 (236)
57 TIGR03343 biphenyl_bphD 2-hydr 99.1 1.9E-09 4.2E-14 89.5 12.4 100 82-201 30-135 (282)
58 COG3509 LpqC Poly(3-hydroxybut 99.1 1.4E-09 3.1E-14 89.5 10.8 111 62-183 46-167 (312)
59 TIGR02240 PHA_depoly_arom poly 99.1 1.4E-09 3.1E-14 90.5 10.8 99 82-203 25-127 (276)
60 PF06500 DUF1100: Alpha/beta h 99.0 1.3E-09 2.8E-14 94.5 10.0 129 49-203 164-297 (411)
61 COG0429 Predicted hydrolase of 99.0 7.4E-09 1.6E-13 86.7 14.1 112 52-181 51-170 (345)
62 TIGR03056 bchO_mg_che_rel puta 99.0 3.3E-09 7.1E-14 87.5 12.0 99 81-202 27-130 (278)
63 TIGR02427 protocat_pcaD 3-oxoa 99.0 9.9E-10 2.1E-14 88.3 8.4 98 81-201 12-113 (251)
64 PRK06489 hypothetical protein; 99.0 3.3E-09 7.3E-14 91.9 12.3 138 43-201 27-188 (360)
65 KOG2100 Dipeptidyl aminopeptid 99.0 3.1E-09 6.8E-14 99.9 12.8 138 50-205 498-647 (755)
66 TIGR03611 RutD pyrimidine util 99.0 2.5E-09 5.5E-14 86.7 10.5 101 80-203 11-116 (257)
67 TIGR01607 PST-A Plasmodium sub 99.0 2.8E-09 6.1E-14 91.5 10.9 133 63-204 10-187 (332)
68 PRK10673 acyl-CoA esterase; Pr 99.0 5.6E-09 1.2E-13 85.4 12.1 92 80-198 14-111 (255)
69 TIGR03230 lipo_lipase lipoprot 99.0 9E-09 2E-13 90.7 13.7 105 80-201 39-153 (442)
70 PRK03204 haloalkane dehalogena 99.0 1.7E-08 3.6E-13 84.8 14.8 98 82-202 34-136 (286)
71 PRK11126 2-succinyl-6-hydroxy- 99.0 3.6E-09 7.9E-14 85.9 10.3 100 82-202 2-102 (242)
72 PLN02965 Probable pheophorbida 99.0 6.1E-09 1.3E-13 85.7 11.8 97 84-201 5-106 (255)
73 COG2945 Predicted hydrolase of 99.0 1.1E-08 2.4E-13 79.3 12.2 116 54-183 6-126 (210)
74 TIGR01836 PHA_synth_III_C poly 99.0 6.5E-09 1.4E-13 89.7 12.3 122 59-205 44-174 (350)
75 KOG2281 Dipeptidyl aminopeptid 99.0 5.8E-09 1.3E-13 93.4 11.7 130 58-204 621-764 (867)
76 PLN03087 BODYGUARD 1 domain co 99.0 2.8E-08 6.1E-13 88.9 15.7 100 81-201 200-308 (481)
77 KOG3101 Esterase D [General fu 99.0 9.1E-10 2E-14 86.4 5.2 115 63-183 28-164 (283)
78 PRK03592 haloalkane dehalogena 98.9 1.1E-08 2.3E-13 86.0 11.7 98 82-202 27-128 (295)
79 TIGR01738 bioH putative pimelo 98.9 8.4E-09 1.8E-13 82.7 9.4 95 82-201 4-99 (245)
80 PF01738 DLH: Dienelactone hyd 98.9 1.5E-08 3.2E-13 81.7 10.7 109 65-200 3-130 (218)
81 PF02230 Abhydrolase_2: Phosph 98.9 1.4E-08 3.1E-13 81.7 10.5 66 134-207 79-145 (216)
82 PRK14875 acetoin dehydrogenase 98.9 2.2E-08 4.8E-13 86.5 12.0 99 81-202 130-232 (371)
83 PRK10349 carboxylesterase BioH 98.9 1.1E-08 2.3E-13 84.1 9.4 93 83-200 14-107 (256)
84 PF02129 Peptidase_S15: X-Pro 98.9 7.4E-09 1.6E-13 86.4 8.3 126 61-206 3-140 (272)
85 COG1647 Esterase/lipase [Gener 98.9 1.9E-08 4.1E-13 79.7 9.1 98 83-205 16-121 (243)
86 PF00756 Esterase: Putative es 98.8 1.4E-08 3E-13 83.3 8.8 123 62-205 7-153 (251)
87 PF03403 PAF-AH_p_II: Platelet 98.8 1.2E-08 2.7E-13 88.8 8.7 132 80-229 98-287 (379)
88 PRK10439 enterobactin/ferric e 98.8 4.3E-07 9.3E-12 80.1 18.1 121 62-202 193-323 (411)
89 TIGR01249 pro_imino_pep_1 prol 98.8 6.2E-08 1.4E-12 82.0 12.0 98 82-202 27-130 (306)
90 PLN02679 hydrolase, alpha/beta 98.8 5.3E-08 1.1E-12 84.5 11.2 97 82-201 88-190 (360)
91 PLN02872 triacylglycerol lipas 98.8 1.6E-08 3.4E-13 88.7 7.9 139 49-204 41-199 (395)
92 PLN03084 alpha/beta hydrolase 98.8 9.4E-08 2E-12 83.5 12.5 99 81-202 126-232 (383)
93 PRK07581 hypothetical protein; 98.8 8.1E-08 1.8E-12 82.4 11.6 128 49-201 9-158 (339)
94 PLN02578 hydrolase 98.8 4.2E-08 9E-13 84.9 9.9 94 83-200 87-185 (354)
95 PRK11460 putative hydrolase; P 98.8 1.1E-07 2.4E-12 77.6 11.4 39 156-202 99-138 (232)
96 KOG4178 Soluble epoxide hydrol 98.7 5.5E-07 1.2E-11 75.5 14.1 122 49-202 21-149 (322)
97 TIGR01392 homoserO_Ac_trn homo 98.7 1.4E-07 3E-12 81.5 10.9 73 113-201 70-161 (351)
98 PF00151 Lipase: Lipase; Inte 98.7 5.4E-08 1.2E-12 83.3 7.9 121 79-204 68-192 (331)
99 KOG2237 Predicted serine prote 98.7 7.3E-08 1.6E-12 86.5 8.3 135 51-206 440-588 (712)
100 COG1770 PtrB Protease II [Amin 98.7 2.6E-07 5.6E-12 83.5 11.3 136 49-205 416-565 (682)
101 PRK11071 esterase YqiA; Provis 98.6 2.7E-07 5.9E-12 73.0 10.0 79 83-182 2-83 (190)
102 PLN02980 2-oxoglutarate decarb 98.6 6.1E-07 1.3E-11 91.2 14.8 98 81-201 1370-1479(1655)
103 COG0400 Predicted esterase [Ge 98.6 1.4E-07 3E-12 75.4 8.0 109 80-206 16-138 (207)
104 PRK08775 homoserine O-acetyltr 98.6 7E-07 1.5E-11 76.9 11.0 73 114-202 98-173 (343)
105 KOG2382 Predicted alpha/beta h 98.6 6.4E-07 1.4E-11 75.1 10.0 102 80-201 50-160 (315)
106 TIGR01838 PHA_synth_I poly(R)- 98.5 2.1E-06 4.6E-11 77.8 13.9 126 61-206 172-306 (532)
107 PF08538 DUF1749: Protein of u 98.5 1.8E-06 3.8E-11 72.3 11.8 117 81-207 32-153 (303)
108 PF05677 DUF818: Chlamydia CHL 98.4 6.3E-06 1.4E-10 69.6 13.0 120 52-181 112-236 (365)
109 COG4188 Predicted dienelactone 98.4 1.4E-06 3E-11 74.4 9.2 122 52-179 38-178 (365)
110 TIGR03502 lipase_Pla1_cef extr 98.4 2.1E-06 4.5E-11 80.6 11.2 95 80-182 447-577 (792)
111 KOG3847 Phospholipase A2 (plat 98.4 9.2E-07 2E-11 73.6 7.2 108 79-202 115-275 (399)
112 PRK00175 metX homoserine O-ace 98.4 4.1E-06 9E-11 73.2 10.8 73 113-201 89-181 (379)
113 PF07819 PGAP1: PGAP1-like pro 98.4 7.5E-06 1.6E-10 66.5 11.5 111 82-205 4-127 (225)
114 PF00561 Abhydrolase_1: alpha/ 98.3 3.1E-06 6.8E-11 67.4 9.0 70 116-201 1-78 (230)
115 PRK05855 short chain dehydroge 98.3 6.3E-06 1.4E-10 75.4 11.8 86 81-180 24-114 (582)
116 PF10230 DUF2305: Uncharacteri 98.3 1.4E-05 3E-10 66.6 12.5 120 82-214 2-134 (266)
117 COG2936 Predicted acyl esteras 98.3 6.5E-06 1.4E-10 74.2 9.8 136 50-206 17-163 (563)
118 COG1505 Serine proteases of th 98.3 4.1E-06 8.8E-11 75.2 8.3 136 49-206 391-539 (648)
119 PF00975 Thioesterase: Thioest 98.2 6.4E-06 1.4E-10 66.4 8.7 96 84-198 2-99 (229)
120 COG2819 Predicted hydrolase of 98.2 1.4E-05 3.1E-10 65.5 10.5 140 50-205 9-175 (264)
121 PRK07868 acyl-CoA synthetase; 98.2 1.4E-05 3.1E-10 78.0 12.2 125 61-203 47-178 (994)
122 PF06342 DUF1057: Alpha/beta h 98.2 6.7E-05 1.5E-09 62.0 14.0 131 50-204 4-140 (297)
123 KOG1454 Predicted hydrolase/ac 98.2 8.6E-06 1.9E-10 69.7 9.1 97 80-197 56-157 (326)
124 PRK05371 x-prolyl-dipeptidyl a 98.2 8.7E-05 1.9E-09 70.4 15.8 87 110-204 274-375 (767)
125 COG3571 Predicted hydrolase of 98.1 2.4E-05 5.3E-10 59.3 9.3 106 81-206 13-129 (213)
126 PF06057 VirJ: Bacterial virul 98.1 1.3E-05 2.9E-10 62.6 7.0 100 84-202 4-107 (192)
127 PF05728 UPF0227: Uncharacteri 98.0 5.2E-05 1.1E-09 59.7 9.7 36 160-205 59-94 (187)
128 KOG4667 Predicted esterase [Li 98.0 7.4E-05 1.6E-09 59.4 10.4 101 80-204 31-141 (269)
129 COG0596 MhpC Predicted hydrola 98.0 7.1E-05 1.5E-09 59.4 10.5 100 82-202 21-123 (282)
130 KOG1553 Predicted alpha/beta h 98.0 7.3E-05 1.6E-09 63.3 10.1 99 80-203 241-346 (517)
131 TIGR01839 PHA_synth_II poly(R) 97.9 0.00034 7.4E-09 63.5 13.3 132 53-206 192-332 (560)
132 PF09752 DUF2048: Uncharacteri 97.9 0.00023 5.1E-09 60.7 11.3 104 63-183 77-198 (348)
133 PTZ00472 serine carboxypeptida 97.9 0.00061 1.3E-08 61.2 14.7 75 135-214 151-228 (462)
134 COG2382 Fes Enterochelin ester 97.9 6.7E-05 1.4E-09 62.5 7.7 135 52-205 69-215 (299)
135 KOG2112 Lysophospholipase [Lip 97.8 0.00012 2.6E-09 57.8 8.6 58 135-203 71-129 (206)
136 PF08840 BAAT_C: BAAT / Acyl-C 97.8 3.3E-05 7.2E-10 62.2 5.5 51 136-201 4-55 (213)
137 PRK06765 homoserine O-acetyltr 97.8 0.00049 1.1E-08 60.4 12.9 49 134-198 142-191 (389)
138 PF05577 Peptidase_S28: Serine 97.8 0.00027 6E-09 62.8 10.8 123 62-204 13-150 (434)
139 PF12146 Hydrolase_4: Putative 97.8 0.00013 2.9E-09 49.2 6.6 55 62-129 3-57 (79)
140 KOG2624 Triglyceride lipase-ch 97.6 0.0003 6.5E-09 61.6 9.0 133 49-205 45-202 (403)
141 PF01674 Lipase_2: Lipase (cla 97.6 0.00015 3.2E-09 58.6 6.1 83 85-181 4-96 (219)
142 PF03583 LIP: Secretory lipase 97.6 0.00059 1.3E-08 57.6 9.9 94 105-206 17-117 (290)
143 PF06821 Ser_hydrolase: Serine 97.6 0.00048 1E-08 53.5 8.6 37 160-203 55-92 (171)
144 PF06028 DUF915: Alpha/beta hy 97.6 0.00066 1.4E-08 56.1 9.8 59 135-204 86-146 (255)
145 PF05057 DUF676: Putative seri 97.6 0.00076 1.6E-08 54.4 10.0 65 141-208 62-132 (217)
146 COG0627 Predicted esterase [Ge 97.6 0.00018 3.9E-09 61.2 6.5 130 65-205 37-190 (316)
147 PF05990 DUF900: Alpha/beta hy 97.5 0.00075 1.6E-08 55.1 9.5 117 80-205 16-140 (233)
148 COG3208 GrsT Predicted thioest 97.5 0.00039 8.5E-09 56.3 7.5 75 103-183 23-97 (244)
149 PF12048 DUF3530: Protein of u 97.5 0.0025 5.5E-08 54.2 12.7 128 56-207 66-234 (310)
150 PF03959 FSH1: Serine hydrolas 97.5 0.00025 5.3E-09 57.0 5.5 63 135-203 83-146 (212)
151 COG4782 Uncharacterized protei 97.5 0.0015 3.2E-08 55.9 10.2 115 80-207 114-239 (377)
152 PF07082 DUF1350: Protein of u 97.4 0.002 4.3E-08 52.5 9.7 92 84-183 18-113 (250)
153 COG4757 Predicted alpha/beta h 97.4 0.00042 9E-09 55.8 5.6 70 103-181 46-126 (281)
154 PF00450 Peptidase_S10: Serine 97.3 0.0059 1.3E-07 53.7 12.7 75 135-211 113-190 (415)
155 PRK04940 hypothetical protein; 97.3 0.0023 5E-08 49.9 8.7 36 160-205 60-95 (180)
156 COG3319 Thioesterase domains o 97.2 0.003 6.5E-08 52.2 9.6 95 83-198 1-98 (257)
157 KOG4840 Predicted hydrolases o 97.2 0.0013 2.9E-08 52.6 6.5 107 82-205 36-147 (299)
158 KOG2183 Prolylcarboxypeptidase 97.1 0.0033 7.2E-08 54.6 8.8 134 56-210 58-211 (492)
159 PF11288 DUF3089: Protein of u 97.1 0.002 4.4E-08 51.3 6.9 81 115-203 45-138 (207)
160 PF01764 Lipase_3: Lipase (cla 97.1 0.0034 7.4E-08 46.5 7.7 44 159-203 63-107 (140)
161 PF11144 DUF2920: Protein of u 97.1 0.025 5.4E-07 49.4 13.7 56 135-202 163-219 (403)
162 PLN02733 phosphatidylcholine-s 97.0 0.0024 5.3E-08 56.8 7.2 87 103-203 110-203 (440)
163 PF11187 DUF2974: Protein of u 96.9 0.0021 4.5E-08 52.2 5.9 56 139-204 69-126 (224)
164 PLN02209 serine carboxypeptida 96.8 0.0099 2.1E-07 53.0 9.9 54 158-211 165-221 (437)
165 KOG3967 Uncharacterized conser 96.8 0.03 6.5E-07 44.7 11.1 109 80-203 99-229 (297)
166 PLN03016 sinapoylglucose-malat 96.8 0.049 1.1E-06 48.6 13.8 54 158-211 163-219 (433)
167 COG4814 Uncharacterized protei 96.8 0.016 3.6E-07 47.3 9.6 56 136-202 120-177 (288)
168 PLN02454 triacylglycerol lipas 96.7 0.0061 1.3E-07 53.5 7.5 44 161-204 229-273 (414)
169 TIGR03712 acc_sec_asp2 accesso 96.7 0.013 2.9E-07 52.0 9.4 115 80-216 287-404 (511)
170 COG3150 Predicted esterase [Ge 96.7 0.0067 1.4E-07 46.5 6.3 21 161-181 60-80 (191)
171 KOG3975 Uncharacterized conser 96.7 0.1 2.2E-06 42.7 13.3 106 80-203 27-148 (301)
172 PF03283 PAE: Pectinacetyleste 96.6 0.023 5E-07 49.4 10.1 44 134-183 136-179 (361)
173 cd00741 Lipase Lipase. Lipase 96.6 0.0084 1.8E-07 45.3 6.7 26 158-183 26-51 (153)
174 KOG1282 Serine carboxypeptidas 96.6 0.042 9.2E-07 49.0 11.7 59 157-215 165-226 (454)
175 PF02450 LCAT: Lecithin:choles 96.5 0.0081 1.8E-07 52.8 6.9 91 103-206 67-165 (389)
176 PF07519 Tannase: Tannase and 96.5 0.019 4E-07 51.8 9.2 123 62-207 16-155 (474)
177 PRK10252 entF enterobactin syn 96.5 0.013 2.9E-07 58.8 9.2 101 82-201 1068-1170(1296)
178 cd00519 Lipase_3 Lipase (class 96.5 0.011 2.3E-07 47.9 7.0 42 159-203 127-169 (229)
179 COG1075 LipA Predicted acetylt 96.4 0.013 2.8E-07 50.5 7.2 105 83-206 60-168 (336)
180 PF02273 Acyl_transf_2: Acyl t 96.4 0.091 2E-06 43.0 11.4 121 54-203 4-135 (294)
181 KOG3043 Predicted hydrolase re 96.2 0.015 3.3E-07 46.7 6.0 81 104-202 57-154 (242)
182 PF01083 Cutinase: Cutinase; 96.2 0.12 2.6E-06 40.3 11.1 109 84-203 7-124 (179)
183 COG2021 MET2 Homoserine acetyl 96.0 0.035 7.6E-07 47.8 7.9 93 80-183 49-170 (368)
184 PLN02408 phospholipase A1 95.8 0.035 7.6E-07 48.1 7.2 42 160-203 200-242 (365)
185 COG3545 Predicted esterase of 95.8 0.13 2.9E-06 39.8 9.4 52 134-202 42-94 (181)
186 PLN02571 triacylglycerol lipas 95.8 0.04 8.8E-07 48.4 7.4 43 161-203 227-276 (413)
187 PF11339 DUF3141: Protein of u 95.7 0.19 4.1E-06 45.3 11.5 103 65-183 54-163 (581)
188 KOG3724 Negative regulator of 95.6 0.064 1.4E-06 50.4 8.4 47 133-181 154-203 (973)
189 PLN00413 triacylglycerol lipas 95.5 0.047 1E-06 48.7 6.7 44 160-203 284-329 (479)
190 PLN02310 triacylglycerol lipas 95.3 0.064 1.4E-06 47.1 7.1 41 160-203 209-250 (405)
191 COG3243 PhaC Poly(3-hydroxyalk 95.3 0.05 1.1E-06 47.7 6.1 79 108-201 132-217 (445)
192 TIGR01849 PHB_depoly_PhaZ poly 95.3 0.36 7.9E-06 42.6 11.6 89 104-206 120-212 (406)
193 PLN02802 triacylglycerol lipas 95.3 0.067 1.5E-06 48.1 7.1 42 160-203 330-372 (509)
194 PLN02162 triacylglycerol lipas 95.1 0.072 1.6E-06 47.4 6.9 47 159-205 277-325 (475)
195 KOG2541 Palmitoyl protein thio 95.0 0.39 8.4E-06 39.8 10.2 103 82-202 24-129 (296)
196 PLN02324 triacylglycerol lipas 95.0 0.1 2.2E-06 45.9 7.4 45 160-204 215-267 (415)
197 PLN03037 lipase class 3 family 94.9 0.098 2.1E-06 47.2 7.2 43 160-204 318-361 (525)
198 KOG2984 Predicted hydrolase [G 94.9 0.026 5.7E-07 44.8 3.1 94 84-198 44-144 (277)
199 PF03096 Ndr: Ndr family; Int 94.8 0.4 8.6E-06 40.2 9.9 100 80-202 21-134 (283)
200 COG3946 VirJ Type IV secretory 94.7 0.1 2.2E-06 45.5 6.4 83 83-180 261-346 (456)
201 PLN02934 triacylglycerol lipas 94.7 0.12 2.5E-06 46.6 6.9 23 160-182 321-343 (515)
202 KOG2182 Hydrolytic enzymes of 94.6 0.42 9E-06 42.9 10.0 120 66-203 74-209 (514)
203 PLN02213 sinapoylglucose-malat 94.4 0.33 7.1E-06 41.5 9.0 72 136-212 32-106 (319)
204 PF10142 PhoPQ_related: PhoPQ- 94.4 1 2.2E-05 39.3 12.0 131 64-210 51-215 (367)
205 PLN02753 triacylglycerol lipas 94.3 0.19 4.2E-06 45.4 7.5 44 160-203 312-360 (531)
206 PLN02761 lipase class 3 family 94.3 0.15 3.2E-06 46.1 6.8 44 160-203 294-343 (527)
207 PLN02719 triacylglycerol lipas 94.2 0.18 4E-06 45.4 7.2 44 160-203 298-346 (518)
208 KOG4569 Predicted lipase [Lipi 94.0 0.18 3.9E-06 43.5 6.7 59 136-203 155-214 (336)
209 KOG2931 Differentiation-relate 93.8 3 6.5E-05 35.2 13.0 111 61-201 32-156 (326)
210 PF02089 Palm_thioest: Palmito 93.5 0.21 4.6E-06 41.7 6.0 36 160-202 80-117 (279)
211 COG2939 Carboxypeptidase C (ca 93.0 1.3 2.9E-05 39.8 10.4 62 134-203 175-237 (498)
212 smart00824 PKS_TE Thioesterase 92.8 1.2 2.5E-05 34.4 9.1 81 103-198 15-97 (212)
213 KOG4540 Putative lipase essent 92.8 0.29 6.3E-06 40.9 5.6 24 160-183 276-299 (425)
214 COG5153 CVT17 Putative lipase 92.8 0.29 6.3E-06 40.9 5.6 24 160-183 276-299 (425)
215 PLN02847 triacylglycerol lipas 92.4 0.24 5.1E-06 45.5 5.0 24 160-183 251-274 (633)
216 PLN02606 palmitoyl-protein thi 92.4 2.4 5.1E-05 36.0 10.6 106 80-202 25-133 (306)
217 PF08237 PE-PPE: PE-PPE domain 92.4 1.7 3.7E-05 35.3 9.6 63 115-183 2-71 (225)
218 KOG3253 Predicted alpha/beta h 92.3 0.22 4.7E-06 45.7 4.7 109 80-202 174-287 (784)
219 PLN02633 palmitoyl protein thi 91.5 4.1 8.9E-05 34.6 11.1 102 80-198 24-126 (314)
220 PLN02517 phosphatidylcholine-s 91.3 0.73 1.6E-05 42.5 6.9 68 104-180 159-233 (642)
221 COG4947 Uncharacterized protei 91.0 0.64 1.4E-05 36.1 5.3 52 140-207 89-141 (227)
222 PF06259 Abhydrolase_8: Alpha/ 88.7 9.8 0.00021 29.7 12.2 40 158-205 107-148 (177)
223 COG3673 Uncharacterized conser 88.7 8 0.00017 33.2 10.5 40 135-181 104-143 (423)
224 KOG2369 Lecithin:cholesterol a 87.9 1.4 3.1E-05 39.3 5.9 71 104-183 127-205 (473)
225 PF05705 DUF829: Eukaryotic pr 87.2 6.3 0.00014 31.9 9.1 90 106-202 19-113 (240)
226 PF10081 Abhydrolase_9: Alpha/ 85.8 6.1 0.00013 33.1 8.2 100 89-201 41-146 (289)
227 PF04083 Abhydro_lipase: Parti 85.1 4 8.7E-05 26.0 5.5 42 49-90 9-51 (63)
228 KOG2551 Phospholipase/carboxyh 80.4 2.7 5.8E-05 34.0 3.9 42 163-204 107-149 (230)
229 PF05277 DUF726: Protein of un 78.3 6.2 0.00013 34.2 5.9 43 158-203 218-262 (345)
230 PF09994 DUF2235: Uncharacteri 77.4 3.9 8.5E-05 34.2 4.3 40 135-181 74-113 (277)
231 PF12242 Eno-Rase_NADH_b: NAD( 69.1 19 0.00041 24.0 5.1 42 135-181 20-61 (78)
232 KOG1283 Serine carboxypeptidas 68.6 38 0.00082 29.2 8.0 55 157-211 119-175 (414)
233 cd07224 Pat_like Patatin-like 61.3 13 0.00028 30.2 3.9 34 141-181 17-50 (233)
234 KOG2029 Uncharacterized conser 57.8 42 0.00091 31.3 6.8 27 156-182 521-548 (697)
235 PF10686 DUF2493: Protein of u 56.5 22 0.00048 23.1 3.7 35 80-121 29-63 (71)
236 KOG1551 Uncharacterized conser 55.0 9 0.0002 32.0 2.0 25 159-183 194-218 (371)
237 TIGR00632 vsr DNA mismatch end 54.1 25 0.00055 25.4 4.0 14 81-94 55-68 (117)
238 KOG4127 Renal dipeptidase [Pos 52.8 62 0.0014 28.3 6.7 78 84-170 268-345 (419)
239 KOG2565 Predicted hydrolases o 50.2 1.2E+02 0.0026 26.9 8.0 27 157-183 226-252 (469)
240 cd07230 Pat_TGL4-5_like Triacy 48.3 24 0.00051 31.5 3.8 26 156-183 99-124 (421)
241 cd07205 Pat_PNPLA6_PNPLA7_NTE1 44.3 34 0.00073 26.1 3.7 19 163-181 31-49 (175)
242 COG5441 Uncharacterized conser 44.0 1.8E+02 0.0039 25.0 7.9 80 104-183 18-116 (401)
243 KOG2385 Uncharacterized conser 43.6 91 0.002 28.7 6.6 68 129-202 419-488 (633)
244 KOG1252 Cystathionine beta-syn 40.9 74 0.0016 27.6 5.4 19 160-178 303-321 (362)
245 COG3007 Uncharacterized paraqu 40.3 58 0.0013 27.7 4.6 44 135-182 21-64 (398)
246 cd07210 Pat_hypo_W_succinogene 40.2 43 0.00093 26.9 3.8 19 163-181 31-49 (221)
247 cd07207 Pat_ExoU_VipD_like Exo 40.0 41 0.0009 25.9 3.7 20 162-181 29-48 (194)
248 cd07198 Patatin Patatin-like p 37.8 48 0.001 25.2 3.7 21 161-181 27-47 (172)
249 COG1806 Uncharacterized protei 36.9 1.1E+02 0.0024 25.5 5.7 54 128-181 113-168 (273)
250 TIGR02193 heptsyl_trn_I lipopo 36.8 19 0.00042 30.3 1.4 21 158-178 253-273 (319)
251 COG4425 Predicted membrane pro 35.7 1.5E+02 0.0032 27.0 6.5 79 86-176 326-413 (588)
252 KOG2872 Uroporphyrinogen decar 34.6 52 0.0011 27.9 3.5 35 80-127 250-284 (359)
253 PF10605 3HBOH: 3HB-oligomer h 34.5 4.1E+02 0.0089 25.2 12.7 38 162-206 287-325 (690)
254 PF05576 Peptidase_S37: PS-10 33.7 1.5E+02 0.0032 26.7 6.2 97 80-201 61-169 (448)
255 smart00827 PKS_AT Acyl transfe 33.0 73 0.0016 26.4 4.3 22 156-179 80-101 (298)
256 cd07204 Pat_PNPLA_like Patatin 32.5 67 0.0014 26.2 3.9 19 163-181 34-52 (243)
257 PRK10964 ADP-heptose:LPS hepto 32.1 3.1E+02 0.0066 23.0 9.0 21 158-178 252-272 (322)
258 cd07229 Pat_TGL3_like Triacylg 31.6 63 0.0014 28.6 3.7 26 156-183 109-134 (391)
259 PF05116 S6PP: Sucrose-6F-phos 31.0 42 0.00091 27.4 2.5 25 139-169 167-191 (247)
260 PF06441 EHN: Epoxide hydrolas 30.9 86 0.0019 22.4 3.7 25 61-90 76-100 (112)
261 cd07218 Pat_iPLA2 Calcium-inde 30.6 76 0.0017 26.0 3.9 18 164-181 34-51 (245)
262 KOG1202 Animal-type fatty acid 30.5 3.8E+02 0.0081 28.1 8.8 83 80-183 2121-2205(2376)
263 COG0431 Predicted flavoprotein 29.8 1.2E+02 0.0026 23.5 4.7 66 104-183 59-124 (184)
264 cd07228 Pat_NTE_like_bacteria 29.3 45 0.00097 25.5 2.2 20 162-181 30-49 (175)
265 PRK05282 (alpha)-aspartyl dipe 29.1 1.6E+02 0.0034 24.1 5.4 40 82-124 31-70 (233)
266 cd07206 Pat_TGL3-4-5_SDP1 Tria 29.1 80 0.0017 26.8 3.8 24 156-181 95-118 (298)
267 cd07212 Pat_PNPLA9 Patatin-lik 28.6 46 0.001 28.3 2.4 18 163-180 35-52 (312)
268 TIGR02690 resist_ArsH arsenica 28.4 1.6E+02 0.0034 23.8 5.3 30 139-170 110-139 (219)
269 PF01734 Patatin: Patatin-like 28.2 50 0.0011 24.7 2.3 21 161-181 28-48 (204)
270 cd07231 Pat_SDP1-like Sugar-De 27.9 87 0.0019 26.9 3.8 24 156-181 94-117 (323)
271 TIGR02802 Pal_lipo peptidoglyc 27.8 76 0.0017 21.8 3.0 56 107-169 23-81 (104)
272 KOG4372 Predicted alpha/beta h 27.2 1E+02 0.0022 27.3 4.2 19 159-177 149-167 (405)
273 cd01819 Patatin_and_cPLA2 Pata 27.1 1.1E+02 0.0023 23.0 3.9 19 160-178 28-46 (155)
274 PF14253 AbiH: Bacteriophage a 26.7 36 0.00079 27.8 1.4 15 158-172 233-247 (270)
275 PRK10279 hypothetical protein; 25.9 93 0.002 26.4 3.7 24 156-181 31-54 (300)
276 PF00809 Pterin_bind: Pterin b 25.7 1.6E+02 0.0034 23.4 4.9 70 109-178 110-185 (210)
277 COG3340 PepE Peptidase E [Amin 25.5 72 0.0016 25.8 2.8 43 80-125 30-72 (224)
278 cd07232 Pat_PLPL Patain-like p 24.6 53 0.0011 29.2 2.1 20 163-182 98-117 (407)
279 cd03146 GAT1_Peptidase_E Type 24.2 3.4E+02 0.0073 21.5 6.5 88 81-176 30-129 (212)
280 cd01826 acyloxyacyl_hydrolase_ 24.0 41 0.00088 28.7 1.2 19 156-174 8-26 (305)
281 cd07208 Pat_hypo_Ecoli_yjju_li 23.9 67 0.0014 26.4 2.5 20 163-182 30-49 (266)
282 cd07213 Pat17_PNPLA8_PNPLA9_li 23.5 67 0.0014 26.9 2.4 19 163-181 37-55 (288)
283 cd07211 Pat_PNPLA8 Patatin-lik 23.5 60 0.0013 27.4 2.2 17 163-179 44-60 (308)
284 cd01520 RHOD_YbbB Member of th 23.5 1.8E+02 0.004 20.7 4.5 34 80-122 85-118 (128)
285 cd07209 Pat_hypo_Ecoli_Z1214_l 23.0 68 0.0015 25.5 2.3 19 163-181 29-47 (215)
286 COG0541 Ffh Signal recognition 23.0 5.7E+02 0.012 23.1 10.4 109 80-198 97-246 (451)
287 PLN02994 1-aminocyclopropane-1 22.8 2E+02 0.0043 21.7 4.6 37 156-202 114-151 (153)
288 TIGR00128 fabD malonyl CoA-acy 22.7 1.4E+02 0.0031 24.5 4.3 20 157-178 82-101 (290)
289 KOG1532 GTPase XAB1, interacts 22.5 4.9E+02 0.011 22.3 8.5 60 123-182 83-148 (366)
290 COG0529 CysC Adenylylsulfate k 21.9 1.7E+02 0.0037 23.1 4.1 50 80-133 20-74 (197)
291 cd00883 beta_CA_cladeA Carboni 21.5 1.1E+02 0.0025 23.7 3.2 34 137-178 66-99 (182)
292 PLN02752 [acyl-carrier protein 21.3 1.5E+02 0.0031 25.5 4.1 17 163-179 127-143 (343)
293 cd07216 Pat17_PNPLA8_PNPLA9_li 21.2 63 0.0014 27.3 1.8 17 163-179 45-61 (309)
294 TIGR02806 clostrip clostripain 21.1 67 0.0015 29.0 2.0 16 80-95 113-128 (476)
295 cd07225 Pat_PNPLA6_PNPLA7 Pata 21.0 76 0.0017 27.0 2.3 18 163-180 46-63 (306)
296 cd07214 Pat17_isozyme_like Pat 20.6 73 0.0016 27.6 2.1 17 163-179 46-62 (349)
297 PLN03006 carbonate dehydratase 20.4 1.2E+02 0.0025 25.9 3.2 32 138-177 158-189 (301)
298 KOG2214 Predicted esterase of 20.3 49 0.0011 30.2 1.0 22 162-183 204-225 (543)
299 cd07217 Pat17_PNPLA8_PNPLA9_li 20.3 82 0.0018 27.3 2.3 17 163-179 44-60 (344)
300 cd07199 Pat17_PNPLA8_PNPLA9_li 20.2 81 0.0017 25.8 2.2 18 163-180 37-54 (258)
301 KOG0256 1-aminocyclopropane-1- 20.1 2.4E+02 0.0053 25.3 5.1 43 136-183 128-170 (471)
302 cd00382 beta_CA Carbonic anhyd 20.1 1.2E+02 0.0027 21.7 2.9 31 136-174 43-73 (119)
303 PF00004 AAA: ATPase family as 20.0 3.1E+02 0.0067 18.9 5.7 44 104-147 12-55 (132)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=1.5e-34 Score=244.63 Aligned_cols=208 Identities=44% Similarity=0.645 Sum_probs=183.9
Q ss_pred CCcccccceEEcCCCcEEecCCC-CCCCCCCCCCCCCCceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcC
Q 040311 12 IDPYKHLQIVVNPDGTITRSLIS-PSTEATPDPVNDDAVVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHG 90 (229)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~r~~~~-p~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHG 90 (229)
..++.+.-+++..+++++|.+.. +..|+..+|. .++..+++.+...+++.+|+|.|.... ...+.|+|||+||
T Consensus 25 ~~~~~~~~i~i~~~~~~~r~~~~~~~~p~~~~p~---~~v~~~dv~~~~~~~l~vRly~P~~~~---~~~~~p~lvyfHG 98 (336)
T KOG1515|consen 25 SVDYLFENIRIFKDGSFERFFGRFDKVPPSSDPV---NGVTSKDVTIDPFTNLPVRLYRPTSSS---SETKLPVLVYFHG 98 (336)
T ss_pred hhhhhhhhceeecCCceeeeecccccCCCCCCcc---cCceeeeeEecCCCCeEEEEEcCCCCC---cccCceEEEEEeC
Confidence 34555666899999999999986 8888888884 578899999999999999999999875 2268899999999
Q ss_pred CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchh
Q 040311 91 GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAG 170 (229)
Q Consensus 91 Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~G 170 (229)
|||.+|+.....|+.++.+++.+.++.||++|||++|++++|.+++|+..|+.|+.++. |+..++|++||+|+|+|+|
T Consensus 99 GGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~--~~~~~~D~~rv~l~GDSaG 176 (336)
T KOG1515|consen 99 GGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNS--WLKLGADPSRVFLAGDSAG 176 (336)
T ss_pred CccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhH--HHHhCCCcccEEEEccCcc
Confidence 99999998888899999999999999999999999999999999999999999999985 5567999999999999999
Q ss_pred HHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCCChhhhh--ccCCCCCCchhhcccC
Q 040311 171 GNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKRTTSELR--LVNDRVSPPCLSDLMW 229 (229)
Q Consensus 171 G~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~~~~~~~--~~~~~~l~~~~~~~~w 229 (229)
|++|..++++..+.. ....+++|+|+ +|++.+++.+.++.+ ....+.+.+...+++|
T Consensus 177 GNia~~va~r~~~~~--~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w 236 (336)
T KOG1515|consen 177 GNIAHVVAQRAADEK--LSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWW 236 (336)
T ss_pred HHHHHHHHHHHhhcc--CCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHH
Confidence 999999999998722 45678999999 999999999888777 5567788887777776
No 2
>PRK10162 acetyl esterase; Provisional
Probab=99.93 E-value=2.7e-25 Score=189.29 Aligned_cols=164 Identities=20% Similarity=0.316 Sum_probs=127.9
Q ss_pred eEEeeEEEcCCCC-EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC
Q 040311 50 VLSKDVTVNQSKN-TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE 128 (229)
Q Consensus 50 ~~~~~v~~~~~~~-~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~ 128 (229)
+..+++.+...++ +.+++|.|.. ...|+|||+|||||..|+... +..++..++...|+.|+++|||++|+
T Consensus 55 ~~~~~~~i~~~~g~i~~~~y~P~~-------~~~p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~Vv~vdYrlape 125 (318)
T PRK10162 55 MATRAYMVPTPYGQVETRLYYPQP-------DSQATLFYLHGGGFILGNLDT--HDRIMRLLASYSGCTVIGIDYTLSPE 125 (318)
T ss_pred ceEEEEEEecCCCceEEEEECCCC-------CCCCEEEEEeCCcccCCCchh--hhHHHHHHHHHcCCEEEEecCCCCCC
Confidence 3466777765544 8999999963 346899999999999888765 56688888887899999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 129 HRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 129 ~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
++++..++|+.++++|+.++..++ ++|++||+|+|+|+||++|+.++.+..+ ....+..++++++ +|+++..+.
T Consensus 126 ~~~p~~~~D~~~a~~~l~~~~~~~---~~d~~~i~l~G~SaGG~la~~~a~~~~~--~~~~~~~~~~~vl~~p~~~~~~~ 200 (318)
T PRK10162 126 ARFPQAIEEIVAVCCYFHQHAEDY---GINMSRIGFAGDSAGAMLALASALWLRD--KQIDCGKVAGVLLWYGLYGLRDS 200 (318)
T ss_pred CCCCCcHHHHHHHHHHHHHhHHHh---CCChhHEEEEEECHHHHHHHHHHHHHHh--cCCCccChhheEEECCccCCCCC
Confidence 999999999999999999987764 8999999999999999999999998766 2222346899999 999986533
Q ss_pred ChhhhhccCCC-CCCchhhccc
Q 040311 208 TTSELRLVNDR-VSPPCLSDLM 228 (229)
Q Consensus 208 ~~~~~~~~~~~-~l~~~~~~~~ 228 (229)
++...+.... .|+.+.++++
T Consensus 201 -~s~~~~~~~~~~l~~~~~~~~ 221 (318)
T PRK10162 201 -VSRRLLGGVWDGLTQQDLQMY 221 (318)
T ss_pred -hhHHHhCCCccccCHHHHHHH
Confidence 3333332222 3555444443
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.93 E-value=2.9e-25 Score=188.54 Aligned_cols=157 Identities=27% Similarity=0.401 Sum_probs=132.4
Q ss_pred EcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHH
Q 040311 57 VNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYD 136 (229)
Q Consensus 57 ~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~ 136 (229)
......+.+++|.|... ...+.|+|||+|||||..|+... +...+..++...|+.|+++|||++|++++|..++
T Consensus 58 ~~~~~~~~~~~y~p~~~----~~~~~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~ 131 (312)
T COG0657 58 GPSGDGVPVRVYRPDRK----AAATAPVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALE 131 (312)
T ss_pred CCCCCceeEEEECCCCC----CCCCCcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHH
Confidence 33445588999999222 22578999999999999999887 4578888888899999999999999999999999
Q ss_pred HHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCCChhhhhcc
Q 040311 137 DAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKRTTSELRLV 215 (229)
Q Consensus 137 D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~~~~~~~~~ 215 (229)
|+.++++|+.++..++ ++|+++|+|+|+|+||++|+.+++...+ . ..+.+.++++ +|+++.....+++..+.
T Consensus 132 d~~~a~~~l~~~~~~~---g~dp~~i~v~GdSAGG~La~~~a~~~~~--~--~~~~p~~~~li~P~~d~~~~~~~~~~~~ 204 (312)
T COG0657 132 DAYAAYRWLRANAAEL---GIDPSRIAVAGDSAGGHLALALALAARD--R--GLPLPAAQVLISPLLDLTSSAASLPGYG 204 (312)
T ss_pred HHHHHHHHHHhhhHhh---CCCccceEEEecCcccHHHHHHHHHHHh--c--CCCCceEEEEEecccCCcccccchhhcC
Confidence 9999999999998875 9999999999999999999999999887 1 2345789999 99999887677777777
Q ss_pred CCCCCCchhhc
Q 040311 216 NDRVSPPCLSD 226 (229)
Q Consensus 216 ~~~~l~~~~~~ 226 (229)
..++++...+.
T Consensus 205 ~~~~~~~~~~~ 215 (312)
T COG0657 205 EADLLDAAAIL 215 (312)
T ss_pred CccccCHHHHH
Confidence 77777766654
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.92 E-value=1.7e-24 Score=173.48 Aligned_cols=135 Identities=36% Similarity=0.500 Sum_probs=109.4
Q ss_pred EEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEE
Q 040311 85 IVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFL 164 (229)
Q Consensus 85 iv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l 164 (229)
|||+|||||..|+... +..++..++.+.|+.|+.+|||++|+..++..++|+.++++|+.++..++ ++|+++|+|
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~---~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKL---GIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHH---TEEEEEEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccc---cccccceEE
Confidence 7999999999988877 57788889887899999999999999999999999999999999997764 899999999
Q ss_pred EecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC-CCCChhh---hhccCCCCCCchhhccc
Q 040311 165 IGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA-IKRTTSE---LRLVNDRVSPPCLSDLM 228 (229)
Q Consensus 165 ~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~-~~~~~~~---~~~~~~~~l~~~~~~~~ 228 (229)
+|+|+||++|+.++.+..+ .. ...++++++ +|+++. ....++. ..+.+.++++...++++
T Consensus 76 ~G~SAGg~la~~~~~~~~~--~~--~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARD--RG--LPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWF 140 (211)
T ss_dssp EEETHHHHHHHHHHHHHHH--TT--TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHH
T ss_pred eecccccchhhhhhhhhhh--hc--ccchhhhhcccccccchhcccccccccccccccccccccccccc
Confidence 9999999999999998877 21 235999999 999988 4445655 33456678877766554
No 5
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.78 E-value=1.2e-18 Score=157.43 Aligned_cols=128 Identities=27% Similarity=0.382 Sum_probs=91.6
Q ss_pred CCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC-------CCC--
Q 040311 59 QSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA-------PEH-- 129 (229)
Q Consensus 59 ~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~-------~~~-- 129 (229)
+++|+.++||.|..... ..+.||+||||||||..|+.....+ ....++.+.+++||.++||++ ++.
T Consensus 105 sEDCL~LnI~~P~~~~~---~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~ 179 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASS---NSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLSLGDLDA 179 (535)
T ss_dssp ES---EEEEEEETSSSS---TTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-BSSSTTS
T ss_pred CchHHHHhhhhcccccc---ccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEeccccccccccccccccc
Confidence 77999999999998752 2378999999999999998843223 223344456999999999974 222
Q ss_pred C-CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cc
Q 040311 130 R-LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FP 200 (229)
Q Consensus 130 ~-~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P 200 (229)
. ..-.+.|...|++|+++++..| |.||++|.|+|+|+||..+..++..... ..-++.+|+ |+
T Consensus 180 ~~gN~Gl~Dq~~AL~WV~~nI~~F---GGDp~~VTl~G~SAGa~sv~~~l~sp~~------~~LF~raI~~SG 243 (535)
T PF00135_consen 180 PSGNYGLLDQRLALKWVQDNIAAF---GGDPDNVTLFGQSAGAASVSLLLLSPSS------KGLFHRAILQSG 243 (535)
T ss_dssp HBSTHHHHHHHHHHHHHHHHGGGG---TEEEEEEEEEEETHHHHHHHHHHHGGGG------TTSBSEEEEES-
T ss_pred CchhhhhhhhHHHHHHHHhhhhhc---ccCCcceeeeeecccccccceeeecccc------cccccccccccc
Confidence 2 4567999999999999999996 9999999999999999998888877432 124677787 66
No 6
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.77 E-value=1.8e-18 Score=150.25 Aligned_cols=114 Identities=29% Similarity=0.440 Sum_probs=92.4
Q ss_pred EcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-------
Q 040311 57 VNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH------- 129 (229)
Q Consensus 57 ~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~------- 129 (229)
-.+++|+.++||.|... .++.|||||||||+|.+|+.....|+ ...|+.+.+++||++|||++.-.
T Consensus 74 ~~sEDCL~LNIwaP~~~-----a~~~PVmV~IHGG~y~~Gs~s~~~yd--gs~La~~g~vVvVSvNYRLG~lGfL~~~~~ 146 (491)
T COG2272 74 TGSEDCLYLNIWAPEVP-----AEKLPVMVYIHGGGYIMGSGSEPLYD--GSALAARGDVVVVSVNYRLGALGFLDLSSL 146 (491)
T ss_pred CccccceeEEeeccCCC-----CCCCcEEEEEeccccccCCCcccccC--hHHHHhcCCEEEEEeCcccccceeeehhhc
Confidence 45789999999999922 26789999999999999998875554 34566665599999999986321
Q ss_pred ----C--CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHH
Q 040311 130 ----R--LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 130 ----~--~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~ 180 (229)
. -.-.+.|+..|++|++++++.+ |.|+++|.|+|+|+||+.++.+..-
T Consensus 147 ~~~~~~~~n~Gl~DqilALkWV~~NIe~F---GGDp~NVTl~GeSAGa~si~~Lla~ 200 (491)
T COG2272 147 DTEDAFASNLGLLDQILALKWVRDNIEAF---GGDPQNVTLFGESAGAASILTLLAV 200 (491)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHh---CCCccceEEeeccchHHHHHHhhcC
Confidence 0 0136899999999999999996 9999999999999999987776643
No 7
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.76 E-value=3.7e-18 Score=153.53 Aligned_cols=129 Identities=25% Similarity=0.343 Sum_probs=99.5
Q ss_pred cCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCC-cEEEEEecCCCCC--------
Q 040311 58 NQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELP-AIVVSVDYRLAPE-------- 128 (229)
Q Consensus 58 ~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g-~~vv~~dyr~~~~-------- 128 (229)
.+++|+.+++|.|.... ..++.|||||||||||..|+.... ....++.+.+ ++||.++||+++.
T Consensus 74 ~sEdcl~l~i~~p~~~~---~~~~~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~ 146 (493)
T cd00312 74 GSEDCLYLNVYTPKNTK---PGNSLPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI 146 (493)
T ss_pred CCCcCCeEEEEeCCCCC---CCCCCCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCC
Confidence 47899999999998642 236789999999999999887653 2234444444 9999999997652
Q ss_pred -CCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 129 -HRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 129 -~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
......+.|+..+++|+++++..| +.|+++|.|+|+|+||+++..++..... ...++++|+ |+..
T Consensus 147 ~~~~n~g~~D~~~al~wv~~~i~~f---ggd~~~v~~~G~SaG~~~~~~~~~~~~~------~~lf~~~i~~sg~~ 213 (493)
T cd00312 147 ELPGNYGLKDQRLALKWVQDNIAAF---GGDPDSVTIFGESAGGASVSLLLLSPDS------KGLFHRAISQSGSA 213 (493)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHh---CCCcceEEEEeecHHHHHhhhHhhCcch------hHHHHHHhhhcCCc
Confidence 222356899999999999999886 9999999999999999999988876432 113666776 6543
No 8
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.68 E-value=1.4e-16 Score=139.64 Aligned_cols=137 Identities=32% Similarity=0.428 Sum_probs=112.7
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
..+-+|+.+|||||+..+..+ +..+++.++.+.|+.++++||.++|+.+||..++++..|+.|+.++-+. .|-.-
T Consensus 394 ~S~sli~HcHGGGfVAqsSkS--HE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~al---lG~Tg 468 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKS--HEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCAL---LGSTG 468 (880)
T ss_pred CCceEEEEecCCceeeecccc--ccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHH---hCccc
Confidence 355699999999999776665 6779999999999999999999999999999999999999999998655 36677
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccCCCCCChhhhhccCCCCCCchhh
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFGAIKRTTSELRLVNDRVSPPCLS 225 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~~~~~~~~~~~~~~~~~l~~~~~ 225 (229)
+||+++|+|+||++++.++++..+ ... ....|+++ +|.+-.-...|+...-.-+|.|+...+
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~--~gv--RvPDGl~laY~ptl~q~~pSPsRlLslMDPLLp~gv~ 532 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIA--YGV--RVPDGLMLAYPPTLLQPAPSPSRLLSLMDPLLPLGVL 532 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHH--hCC--CCCCceEEecChhhcccCCCHHHHHHhhcccchHHHH
Confidence 999999999999999999999877 333 34689999 555555556666655455787776654
No 9
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.68 E-value=5.5e-17 Score=125.98 Aligned_cols=135 Identities=20% Similarity=0.242 Sum_probs=109.7
Q ss_pred CceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC
Q 040311 48 AVVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP 127 (229)
Q Consensus 48 ~~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~ 127 (229)
.....+++.|..++...++||.|.. ..|+.||+|||.|..|+.... ... ...+.+.||.|++++|.+++
T Consensus 41 ~i~r~e~l~Yg~~g~q~VDIwg~~~--------~~klfIfIHGGYW~~g~rk~c--lsi-v~~a~~~gY~vasvgY~l~~ 109 (270)
T KOG4627|consen 41 QIIRVEHLRYGEGGRQLVDIWGSTN--------QAKLFIFIHGGYWQEGDRKMC--LSI-VGPAVRRGYRVASVGYNLCP 109 (270)
T ss_pred cccchhccccCCCCceEEEEecCCC--------CccEEEEEecchhhcCchhcc--cch-hhhhhhcCeEEEEeccCcCc
Confidence 3566889999998889999999863 457999999999998876552 222 33445789999999999999
Q ss_pred CC-CCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 128 EH-RLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 128 ~~-~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
+. .....+.|....++|+.+... ..+.+.+.|||+|+|+|+.+.++..+ ++|.|+++ |+..++.
T Consensus 110 q~htL~qt~~~~~~gv~filk~~~-------n~k~l~~gGHSaGAHLa~qav~R~r~-------prI~gl~l~~GvY~l~ 175 (270)
T KOG4627|consen 110 QVHTLEQTMTQFTHGVNFILKYTE-------NTKVLTFGGHSAGAHLAAQAVMRQRS-------PRIWGLILLCGVYDLR 175 (270)
T ss_pred ccccHHHHHHHHHHHHHHHHHhcc-------cceeEEEcccchHHHHHHHHHHHhcC-------chHHHHHHHhhHhhHH
Confidence 86 667778999999999988643 34679999999999999999999766 58999999 9887755
Q ss_pred CC
Q 040311 206 KR 207 (229)
Q Consensus 206 ~~ 207 (229)
+.
T Consensus 176 EL 177 (270)
T KOG4627|consen 176 EL 177 (270)
T ss_pred HH
Confidence 43
No 10
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.67 E-value=9.9e-16 Score=130.80 Aligned_cols=133 Identities=21% Similarity=0.290 Sum_probs=96.4
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHh-hCCcEEEEEecCCCC----CCCCCchHHHHHHHHHHHHHhcchhhh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAV-ELPAIVVSVDYRLAP----EHRLPAAYDDAMDALHWIKNTQDDWLM 154 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~-~~g~~vv~~dyr~~~----~~~~~~~~~D~~~a~~~l~~~~~~~~~ 154 (229)
+..|+|||+|||||..+..... -.++..+.. --...++.+||.+.+ ++.+|.++.++.+.+++|.+..
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~q--i~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~----- 192 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQ--IEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE----- 192 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHH--HHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-----
Confidence 4469999999999998876553 222222211 125689999999987 8899999999999999999542
Q ss_pred cCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCC----CChhhhhccCCCCCCchhh
Q 040311 155 KHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIK----RTTSELRLVNDRVSPPCLS 225 (229)
Q Consensus 155 ~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~----~~~~~~~~~~~~~l~~~~~ 225 (229)
..++|.|+|+||||++++.+.+...+. . ....++.+|+ |||+.... ...++..+...+.+.....
T Consensus 193 ---G~~nI~LmGDSAGGnL~Ls~LqyL~~~--~-~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~ 262 (374)
T PF10340_consen 193 ---GNKNIILMGDSAGGNLALSFLQYLKKP--N-KLPYPKSAILISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGL 262 (374)
T ss_pred ---CCCeEEEEecCccHHHHHHHHHHHhhc--C-CCCCCceeEEECCCcCCcCCCCCCCccccccccccccchhhH
Confidence 237999999999999999998887651 1 1235689999 99998762 2334444555666665443
No 11
>PLN00021 chlorophyllase
Probab=99.58 E-value=6.3e-14 Score=118.96 Aligned_cols=140 Identities=22% Similarity=0.270 Sum_probs=99.3
Q ss_pred eEEeeEEEcCC--CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC
Q 040311 50 VLSKDVTVNQS--KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP 127 (229)
Q Consensus 50 ~~~~~v~~~~~--~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~ 127 (229)
+...++.+.+. ..+++.+|+|... ++.|+|||+||+++. .. .|...+..++. .|+.|+++|++...
T Consensus 24 ~~~~~~~~~~~~~~~~p~~v~~P~~~------g~~PvVv~lHG~~~~---~~--~y~~l~~~Las-~G~~VvapD~~g~~ 91 (313)
T PLN00021 24 VELITVDESSRPSPPKPLLVATPSEA------GTYPVLLFLHGYLLY---NS--FYSQLLQHIAS-HGFIVVAPQLYTLA 91 (313)
T ss_pred eEEEEecCCCcCCCCceEEEEeCCCC------CCCCEEEEECCCCCC---cc--cHHHHHHHHHh-CCCEEEEecCCCcC
Confidence 44444444332 4688999999753 678999999997653 22 26677777764 59999999966432
Q ss_pred CCCCCchHHHHHHHHHHHHHhcchhhh--cCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 128 EHRLPAAYDDAMDALHWIKNTQDDWLM--KHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 128 ~~~~~~~~~D~~~a~~~l~~~~~~~~~--~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
.......++|+..+++|+.+.....+. ...|.++++|+|||+||.+|+.++.+.++ .. ...+++++++ .|+...
T Consensus 92 ~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~--~~-~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 92 GPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAA--VS-LPLKFSALIGLDPVDGT 168 (313)
T ss_pred CCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccc--cc-cccceeeEEeecccccc
Confidence 223345578888899999875433211 23677899999999999999999998765 11 1246899999 998654
No 12
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.54 E-value=1.6e-13 Score=126.69 Aligned_cols=131 Identities=18% Similarity=0.146 Sum_probs=97.8
Q ss_pred eEEeeEEEcCCCC--EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC
Q 040311 50 VLSKDVTVNQSKN--TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP 127 (229)
Q Consensus 50 ~~~~~v~~~~~~~--~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~ 127 (229)
...+.+++...++ +...++.|.+.. +.++.|+|||+|||....-. ..+....+.++. .||+|+.+|||++.
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~---~~k~yP~i~~~hGGP~~~~~---~~~~~~~q~~~~-~G~~V~~~n~RGS~ 435 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFD---PRKKYPLIVYIHGGPSAQVG---YSFNPEIQVLAS-AGYAVLAPNYRGST 435 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCC---CCCCCCEEEEeCCCCccccc---cccchhhHHHhc-CCeEEEEeCCCCCC
Confidence 4456777777666 566677887764 34558999999999654322 235556666764 69999999999876
Q ss_pred CC-----------CCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEE
Q 040311 128 EH-----------RLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGL 196 (229)
Q Consensus 128 ~~-----------~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~ 196 (229)
.. .....++|+.++++|+.+.. .+|++||+|+|+|.||.|+++++.+.+. +++.
T Consensus 436 GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~------~~d~~ri~i~G~SyGGymtl~~~~~~~~---------f~a~ 500 (620)
T COG1506 436 GYGREFADAIRGDWGGVDLEDLIAAVDALVKLP------LVDPERIGITGGSYGGYMTLLAATKTPR---------FKAA 500 (620)
T ss_pred ccHHHHHHhhhhccCCccHHHHHHHHHHHHhCC------CcChHHeEEeccChHHHHHHHHHhcCch---------hheE
Confidence 52 22356899999999887764 6899999999999999999999988765 5566
Q ss_pred Ee-cccc
Q 040311 197 LL-FPFF 202 (229)
Q Consensus 197 il-~P~~ 202 (229)
+. .+..
T Consensus 501 ~~~~~~~ 507 (620)
T COG1506 501 VAVAGGV 507 (620)
T ss_pred EeccCcc
Confidence 55 5543
No 13
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.53 E-value=7.2e-14 Score=112.33 Aligned_cols=114 Identities=16% Similarity=0.144 Sum_probs=81.6
Q ss_pred EEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-------------CCC
Q 040311 66 RIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-------------RLP 132 (229)
Q Consensus 66 ~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-------------~~~ 132 (229)
.+|+|++.. +++|+||++||++........ ......++.+.|+.|+++|+++.... ...
T Consensus 2 ~ly~P~~~~-----~~~P~vv~lHG~~~~~~~~~~---~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~ 73 (212)
T TIGR01840 2 YVYVPAGLT-----GPRALVLALHGCGQTASAYVI---DWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGT 73 (212)
T ss_pred EEEcCCCCC-----CCCCEEEEeCCCCCCHHHHhh---hcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCC
Confidence 478898754 678999999998754222110 01134566678999999999874211 011
Q ss_pred chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 133 AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 133 ~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
....|+...++++.++. ++|++||+|+|+|+||.+++.++.++++ .+++++. ++.
T Consensus 74 ~~~~~~~~~i~~~~~~~------~id~~~i~l~G~S~Gg~~a~~~a~~~p~--------~~~~~~~~~g~ 129 (212)
T TIGR01840 74 GEVESLHQLIDAVKANY------SIDPNRVYVTGLSAGGGMTAVLGCTYPD--------VFAGGASNAGL 129 (212)
T ss_pred ccHHHHHHHHHHHHHhc------CcChhheEEEEECHHHHHHHHHHHhCch--------hheEEEeecCC
Confidence 23567777888887753 7899999999999999999999999887 5777766 544
No 14
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.52 E-value=2.2e-13 Score=112.98 Aligned_cols=113 Identities=14% Similarity=0.060 Sum_probs=80.9
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC-------CCchHHHHHHHHHHHHHhcchh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR-------LPAAYDDAMDALHWIKNTQDDW 152 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~-------~~~~~~D~~~a~~~l~~~~~~~ 152 (229)
+++|+||++||.|....... ..+...+..++ +.||.|+.+||++.+... +....+|+..+++|+.+..
T Consensus 23 ~~~~~VlllHG~g~~~~~~~-~~~~~la~~La-~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~--- 97 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNKSR-RMVALQARAFA-AGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQG--- 97 (266)
T ss_pred CCceEEEEECCCcccccchh-HHHHHHHHHHH-HCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC---
Confidence 45799999999543222111 12334456665 569999999999865331 2234688888898887642
Q ss_pred hhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCCChhh
Q 040311 153 LMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKRTTSE 211 (229)
Q Consensus 153 ~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~~~~~ 211 (229)
..+|+|+|+|+||.+++.++.+.++ .++++|+ +|++++......+
T Consensus 98 ------~~~v~LvG~SmGG~vAl~~A~~~p~--------~v~~lVL~~P~~~g~~~l~~~ 143 (266)
T TIGR03101 98 ------HPPVTLWGLRLGALLALDAANPLAA--------KCNRLVLWQPVVSGKQQLQQF 143 (266)
T ss_pred ------CCCEEEEEECHHHHHHHHHHHhCcc--------ccceEEEeccccchHHHHHHH
Confidence 3689999999999999999988766 6889999 9998766554443
No 15
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.52 E-value=2.8e-13 Score=115.81 Aligned_cols=133 Identities=17% Similarity=0.194 Sum_probs=89.5
Q ss_pred ceEEeeEEEcCCCC--EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC
Q 040311 49 VVLSKDVTVNQSKN--TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA 126 (229)
Q Consensus 49 ~~~~~~v~~~~~~~--~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~ 126 (229)
++..++..+...++ +.++.|.|.... ..+++||++||.+-. . ...+..+...++ +.||.|+++|+|+.
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~~-----~~~~~VvllHG~~~~---~-~~~~~~~~~~L~-~~Gy~V~~~D~rGh 98 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSSS-----PPRALIFMVHGYGND---I-SWTFQSTAIFLA-QMGFACFALDLEGH 98 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCCC-----CCceEEEEEcCCCCC---c-ceehhHHHHHHH-hCCCEEEEecCCCC
Confidence 34444444544444 566677775432 457899999995421 1 112344455565 46999999999986
Q ss_pred CCCC--------CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 127 PEHR--------LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 127 ~~~~--------~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
+... +....+|+.++++++.... ..+..+++|+|||+||.+|+.++.+.++ .++++|+
T Consensus 99 G~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~------~~~~~~i~l~GhSmGG~ia~~~a~~~p~--------~v~~lvl 164 (330)
T PLN02298 99 GRSEGLRAYVPNVDLVVEDCLSFFNSVKQRE------EFQGLPRFLYGESMGGAICLLIHLANPE--------GFDGAVL 164 (330)
T ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHHhcc------cCCCCCEEEEEecchhHHHHHHHhcCcc--------cceeEEE
Confidence 5432 1234678888888887542 2233579999999999999999988766 6999999
Q ss_pred -ccccCCC
Q 040311 199 -FPFFGAI 205 (229)
Q Consensus 199 -~P~~~~~ 205 (229)
+|+....
T Consensus 165 ~~~~~~~~ 172 (330)
T PLN02298 165 VAPMCKIS 172 (330)
T ss_pred ecccccCC
Confidence 9886543
No 16
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.50 E-value=9.5e-14 Score=126.48 Aligned_cols=117 Identities=29% Similarity=0.432 Sum_probs=91.0
Q ss_pred EcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC---------
Q 040311 57 VNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP--------- 127 (229)
Q Consensus 57 ~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~--------- 127 (229)
..+++|+.+++|.|+.... .+ .||+||+||||+..|+..... ......+....+++||.++||++.
T Consensus 91 ~~sEDCLylNV~tp~~~~~---~~-~pV~V~iHGG~~~~gs~~~~~-~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~ 165 (545)
T KOG1516|consen 91 FGSEDCLYLNVYTPQGCSE---SK-LPVMVYIHGGGFQFGSASSFE-IISPAYVLLLKDVVVVTINYRLGPLGFLSTGDS 165 (545)
T ss_pred CCcCCCceEEEeccCCCcc---CC-CCEEEEEeCCceeeccccchh-hcCchhccccCCEEEEEecccceeceeeecCCC
Confidence 4568999999999987641 12 899999999999988865420 112233344557999999999852
Q ss_pred CCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 128 EHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 128 ~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
..+....+.|...|++|++++...+ |.|+++|.|+|||+||..+..+....
T Consensus 166 ~~~gN~gl~Dq~~AL~wv~~~I~~F---GGdp~~vTl~G~saGa~~v~~l~~Sp 216 (545)
T KOG1516|consen 166 AAPGNLGLFDQLLALRWVKDNIPSF---GGDPKNVTLFGHSAGAASVSLLTLSP 216 (545)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhc---CCCCCeEEEEeechhHHHHHHHhcCH
Confidence 2223456889999999999999886 89999999999999999988877644
No 17
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.46 E-value=2.5e-12 Score=113.30 Aligned_cols=127 Identities=13% Similarity=0.094 Sum_probs=85.7
Q ss_pred EeeEEEcCCC--CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC
Q 040311 52 SKDVTVNQSK--NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH 129 (229)
Q Consensus 52 ~~~v~~~~~~--~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~ 129 (229)
.+.+.+...+ .+...++.|+.. ++.|+||++||.+ +.....+..+...++ +.|+.|+.+|+++.++.
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~------~~~P~Vli~gG~~----~~~~~~~~~~~~~La-~~Gy~vl~~D~pG~G~s 236 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGD------GPFPTVLVCGGLD----SLQTDYYRLFRDYLA-PRGIAMLTIDMPSVGFS 236 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCC------CCccEEEEeCCcc----cchhhhHHHHHHHHH-hCCCEEEEECCCCCCCC
Confidence 3444444333 477777788732 5789888776632 111222444555555 56999999999986543
Q ss_pred CC----CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 130 RL----PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 130 ~~----~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.. .........+++|+.+.. .+|.+||+++|+|+||++|+.+|...++ +|+++|+ +|.++
T Consensus 237 ~~~~~~~d~~~~~~avld~l~~~~------~vd~~ri~l~G~S~GG~~Al~~A~~~p~--------ri~a~V~~~~~~~ 301 (414)
T PRK05077 237 SKWKLTQDSSLLHQAVLNALPNVP------WVDHTRVAAFGFRFGANVAVRLAYLEPP--------RLKAVACLGPVVH 301 (414)
T ss_pred CCCCccccHHHHHHHHHHHHHhCc------ccCcccEEEEEEChHHHHHHHHHHhCCc--------CceEEEEECCccc
Confidence 21 122223346778877653 5788999999999999999999988765 6899999 88764
No 18
>PRK10115 protease 2; Provisional
Probab=99.45 E-value=2.1e-12 Score=120.34 Aligned_cols=137 Identities=17% Similarity=0.113 Sum_probs=102.8
Q ss_pred ceEEeeEEEcCCCCEEEE--EEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC
Q 040311 49 VVLSKDVTVNQSKNTWVR--IFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA 126 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~~~--i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~ 126 (229)
....+.+.+.+.++..+. +..+++.. ..++.|+||++|||-... ....|......++. .|++|+.+++|++
T Consensus 413 ~~~~e~v~~~s~DG~~Ip~~l~~~~~~~---~~~~~P~ll~~hGg~~~~---~~p~f~~~~~~l~~-rG~~v~~~n~RGs 485 (686)
T PRK10115 413 NYRSEHLWITARDGVEVPVSLVYHRKHF---RKGHNPLLVYGYGSYGAS---IDADFSFSRLSLLD-RGFVYAIVHVRGG 485 (686)
T ss_pred ccEEEEEEEECCCCCEEEEEEEEECCCC---CCCCCCEEEEEECCCCCC---CCCCccHHHHHHHH-CCcEEEEEEcCCC
Confidence 346788888888876554 34444322 225679999999964432 22224455555654 6999999999998
Q ss_pred CCCC-----------CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeE
Q 040311 127 PEHR-----------LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKG 195 (229)
Q Consensus 127 ~~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g 195 (229)
.+.. -...++|+.++++||.++. .+|++|++++|.|+||.|+.+++.+.++ ..++
T Consensus 486 ~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g------~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--------lf~A 551 (686)
T PRK10115 486 GELGQQWYEDGKFLKKKNTFNDYLDACDALLKLG------YGSPSLCYGMGGSAGGMLMGVAINQRPE--------LFHG 551 (686)
T ss_pred CccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcC------CCChHHeEEEEECHHHHHHHHHHhcChh--------heeE
Confidence 6533 1256899999999999874 5799999999999999999999988888 6899
Q ss_pred EEe-ccccCCCC
Q 040311 196 LLL-FPFFGAIK 206 (229)
Q Consensus 196 ~il-~P~~~~~~ 206 (229)
+|+ .|++|+..
T Consensus 552 ~v~~vp~~D~~~ 563 (686)
T PRK10115 552 VIAQVPFVDVVT 563 (686)
T ss_pred EEecCCchhHhh
Confidence 999 99998653
No 19
>PRK10985 putative hydrolase; Provisional
Probab=99.43 E-value=3.7e-12 Score=108.85 Aligned_cols=157 Identities=14% Similarity=0.079 Sum_probs=94.4
Q ss_pred ccceEEcCCCcEEecCC--CCCCCCCCCCCCCCCceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCccc
Q 040311 17 HLQIVVNPDGTITRSLI--SPSTEATPDPVNDDAVVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFI 94 (229)
Q Consensus 17 ~~~~~~~~~~~~~r~~~--~p~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~ 94 (229)
|.|-.++.++.++.+.. .+..+. .. ...+.+...+++.+.+++. .... ...+.|+||++||.+-
T Consensus 4 ~~p~~~~~~~h~qt~~~~~~~~~~~-~~-------~~~~~~~~~dg~~~~l~w~-~~~~----~~~~~p~vll~HG~~g- 69 (324)
T PRK10985 4 FTPMRGASNPHLQTLLPRLIRRKVL-FT-------PYWQRLELPDGDFVDLAWS-EDPA----QARHKPRLVLFHGLEG- 69 (324)
T ss_pred CCCCcCCCCCcHHHhhHHHhcCCCC-CC-------cceeEEECCCCCEEEEecC-CCCc----cCCCCCEEEEeCCCCC-
Confidence 45556778999998762 222111 11 1234455554444444432 2211 1145799999999421
Q ss_pred ccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC-------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEec
Q 040311 95 FFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL-------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGS 167 (229)
Q Consensus 95 ~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~-------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~ 167 (229)
+........++..+. +.|+.|+.+|||++...+. ....+|+..+++++.++. ...+++++||
T Consensus 70 --~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~--------~~~~~~~vG~ 138 (324)
T PRK10985 70 --SFNSPYAHGLLEAAQ-KRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREF--------GHVPTAAVGY 138 (324)
T ss_pred --CCcCHHHHHHHHHHH-HCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhC--------CCCCEEEEEe
Confidence 212211223445554 6799999999998643321 134789999999998753 2257999999
Q ss_pred chhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 168 SAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 168 S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
|+||.+++.++.+..+ ...+.++++ ++.+++
T Consensus 139 S~GG~i~~~~~~~~~~------~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 139 SLGGNMLACLLAKEGD------DLPLDAAVIVSAPLML 170 (324)
T ss_pred cchHHHHHHHHHhhCC------CCCccEEEEEcCCCCH
Confidence 9999988887776543 123667666 655543
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=99.43 E-value=2.3e-12 Score=107.13 Aligned_cols=115 Identities=23% Similarity=0.250 Sum_probs=82.0
Q ss_pred CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC--------C
Q 040311 61 KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL--------P 132 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~--------~ 132 (229)
..+.+++|.|.+ .++++|+++||.+.. ...|..++..++. .|+.|+++|+|+.+.... .
T Consensus 11 ~~l~~~~~~~~~-------~~~~~v~llHG~~~~-----~~~~~~~~~~l~~-~g~~via~D~~G~G~S~~~~~~~~~~~ 77 (276)
T PHA02857 11 DYIYCKYWKPIT-------YPKALVFISHGAGEH-----SGRYEELAENISS-LGILVFSHDHIGHGRSNGEKMMIDDFG 77 (276)
T ss_pred CEEEEEeccCCC-------CCCEEEEEeCCCccc-----cchHHHHHHHHHh-CCCEEEEccCCCCCCCCCccCCcCCHH
Confidence 347788888752 456899999995432 2236667777754 599999999998754321 1
Q ss_pred chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 133 AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 133 ~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
..++|+...++++++.. ...+++|+|||+||.+|+.++.+.++ .++++|+ +|++..
T Consensus 78 ~~~~d~~~~l~~~~~~~--------~~~~~~lvG~S~GG~ia~~~a~~~p~--------~i~~lil~~p~~~~ 134 (276)
T PHA02857 78 VYVRDVVQHVVTIKSTY--------PGVPVFLLGHSMGATISILAAYKNPN--------LFTAMILMSPLVNA 134 (276)
T ss_pred HHHHHHHHHHHHHHhhC--------CCCCEEEEEcCchHHHHHHHHHhCcc--------ccceEEEecccccc
Confidence 23466666666655432 23579999999999999999988776 5899999 998653
No 21
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.42 E-value=4.6e-12 Score=109.27 Aligned_cols=116 Identities=20% Similarity=0.231 Sum_probs=78.6
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC--------Cch
Q 040311 63 TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL--------PAA 134 (229)
Q Consensus 63 ~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~--------~~~ 134 (229)
+....|.|.+. +++++|||+||.|.. . ...+..++..++ +.||.|+++||++.+.... ...
T Consensus 74 l~~~~~~p~~~------~~~~~iv~lHG~~~~---~-~~~~~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 142 (349)
T PLN02385 74 IFSKSWLPENS------RPKAAVCFCHGYGDT---C-TFFFEGIARKIA-SSGYGVFAMDYPGFGLSEGLHGYIPSFDDL 142 (349)
T ss_pred EEEEEEecCCC------CCCeEEEEECCCCCc---c-chHHHHHHHHHH-hCCCEEEEecCCCCCCCCCCCCCcCCHHHH
Confidence 45566777543 467899999995432 1 111234556665 4599999999998654321 123
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.+|+...++.+.... ..+..+++|+|||+||.+|+.++.++++ .++++|+ +|+..
T Consensus 143 ~~dv~~~l~~l~~~~------~~~~~~~~LvGhSmGG~val~~a~~~p~--------~v~glVLi~p~~~ 198 (349)
T PLN02385 143 VDDVIEHYSKIKGNP------EFRGLPSFLFGQSMGGAVALKVHLKQPN--------AWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHHHHHHhcc------ccCCCCEEEEEeccchHHHHHHHHhCcc--------hhhheeEeccccc
Confidence 455555555554321 2344589999999999999999998887 6899999 88764
No 22
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.42 E-value=1.2e-12 Score=113.54 Aligned_cols=112 Identities=23% Similarity=0.321 Sum_probs=90.0
Q ss_pred CCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC----------CC
Q 040311 59 QSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA----------PE 128 (229)
Q Consensus 59 ~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~----------~~ 128 (229)
+++|+.+++|.|.... .+..|+|||-||||..|+..-..|+. +.++..-+.+||+++||.+ ++
T Consensus 117 SEDCLYlNVW~P~~~p-----~n~tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~e 189 (601)
T KOG4389|consen 117 SEDCLYLNVWAPAADP-----YNLTVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHPE 189 (601)
T ss_pred ChhceEEEEeccCCCC-----CCceEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCCC
Confidence 6789999999995221 44559999999999999988766643 4455666899999999964 45
Q ss_pred CCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHH
Q 040311 129 HRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 129 ~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~ 180 (229)
.+..-.+-|..-|++|+++++..+ |.|+++|.|.|.|+|++-+.+..+.
T Consensus 190 aPGNmGl~DQqLAl~WV~~Ni~aF---GGnp~~vTLFGESAGaASv~aHLls 238 (601)
T KOG4389|consen 190 APGNMGLLDQQLALQWVQENIAAF---GGNPSRVTLFGESAGAASVVAHLLS 238 (601)
T ss_pred CCCccchHHHHHHHHHHHHhHHHh---CCCcceEEEeccccchhhhhheecC
Confidence 555667899999999999999886 9999999999999999755554443
No 23
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.42 E-value=2.6e-12 Score=105.03 Aligned_cols=126 Identities=24% Similarity=0.331 Sum_probs=94.9
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHH
Q 040311 63 TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDAL 142 (229)
Q Consensus 63 ~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~ 142 (229)
..+.+|.|+.. +.+|++||+||-+ . ... .|..++++++. .||+||.+|+.......-...+++....+
T Consensus 4 ~~l~v~~P~~~------g~yPVv~f~~G~~-~---~~s-~Ys~ll~hvAS-hGyIVV~~d~~~~~~~~~~~~~~~~~~vi 71 (259)
T PF12740_consen 4 KPLLVYYPSSA------GTYPVVLFLHGFL-L---INS-WYSQLLEHVAS-HGYIVVAPDLYSIGGPDDTDEVASAAEVI 71 (259)
T ss_pred CCeEEEecCCC------CCcCEEEEeCCcC-C---CHH-HHHHHHHHHHh-CceEEEEecccccCCCCcchhHHHHHHHH
Confidence 45678999865 7899999999944 1 222 28889999985 69999999944433234446688899999
Q ss_pred HHHHHhcchhhhcC--CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 143 HWIKNTQDDWLMKH--ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 143 ~~l~~~~~~~~~~~--~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
+|+.+.....+..+ +|-+|++|+|||.||-+|..+++...+ . ....+++++++ .|+-.
T Consensus 72 ~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~--~-~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 72 DWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNAS--S-SLDLRFSALILLDPVDG 132 (259)
T ss_pred HHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcc--c-ccccceeEEEEeccccc
Confidence 99998765543322 588999999999999999999988743 1 11347999999 99864
No 24
>PRK13604 luxD acyl transferase; Provisional
Probab=99.41 E-value=5e-12 Score=106.08 Aligned_cols=127 Identities=13% Similarity=0.084 Sum_probs=87.3
Q ss_pred EeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC-CC--
Q 040311 52 SKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA-PE-- 128 (229)
Q Consensus 52 ~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~-~~-- 128 (229)
+.|..+...+++.++.|+-.+... ...+.++||++||-+-. . ..+..+++.++ +.|+.|+.+|+|.+ ++
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HGf~~~---~--~~~~~~A~~La-~~G~~vLrfD~rg~~GeS~ 80 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASGFARR---M--DHFAGLAEYLS-SNGFHVIRYDSLHHVGLSS 80 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCCCCCC---h--HHHHHHHHHHH-HCCCEEEEecCCCCCCCCC
Confidence 445566666777766554332100 22677899999993321 1 12566777776 56999999998753 32
Q ss_pred CC-----CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 129 HR-----LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 129 ~~-----~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
.. ......|+.++++|++++. .++|+|+||||||.+|+.+|.. . +++++|+ ||+.
T Consensus 81 G~~~~~t~s~g~~Dl~aaid~lk~~~---------~~~I~LiG~SmGgava~~~A~~--~--------~v~~lI~~sp~~ 141 (307)
T PRK13604 81 GTIDEFTMSIGKNSLLTVVDWLNTRG---------INNLGLIAASLSARIAYEVINE--I--------DLSFLITAVGVV 141 (307)
T ss_pred CccccCcccccHHHHHHHHHHHHhcC---------CCceEEEEECHHHHHHHHHhcC--C--------CCCEEEEcCCcc
Confidence 21 2345799999999998742 3689999999999998666542 1 3889999 9998
Q ss_pred CCC
Q 040311 203 GAI 205 (229)
Q Consensus 203 ~~~ 205 (229)
++.
T Consensus 142 ~l~ 144 (307)
T PRK13604 142 NLR 144 (307)
T ss_pred cHH
Confidence 854
No 25
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.41 E-value=1.5e-12 Score=104.83 Aligned_cols=115 Identities=19% Similarity=0.192 Sum_probs=78.9
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC--CCCCCC--------
Q 040311 63 TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA--PEHRLP-------- 132 (229)
Q Consensus 63 ~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~--~~~~~~-------- 132 (229)
+.+++|+|+... ..+.|+||++||.+.. ........-+..++++.|++|+.++-... ....|.
T Consensus 1 l~Y~lYvP~~~~----~~~~PLVv~LHG~~~~---a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~ 73 (220)
T PF10503_consen 1 LSYRLYVPPGAP----RGPVPLVVVLHGCGQS---AEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQR 73 (220)
T ss_pred CcEEEecCCCCC----CCCCCEEEEeCCCCCC---HHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCccccccccccc
Confidence 357899999653 2478999999997553 22211122356788899999999984321 111111
Q ss_pred --chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 133 --AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 133 --~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
.....+...++++.++ ..+|++||++.|+|+||.|+..++..+++ .++++..
T Consensus 74 g~~d~~~i~~lv~~v~~~------~~iD~~RVyv~G~S~Gg~ma~~la~~~pd--------~faa~a~ 127 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAAR------YNIDPSRVYVTGLSNGGMMANVLACAYPD--------LFAAVAV 127 (220)
T ss_pred CccchhhHHHHHHhHhhh------cccCCCceeeEEECHHHHHHHHHHHhCCc--------cceEEEe
Confidence 1233444556666654 38999999999999999999999999998 4666555
No 26
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.41 E-value=1.4e-11 Score=102.95 Aligned_cols=124 Identities=19% Similarity=0.172 Sum_probs=79.0
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecC--CCCCC----------
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYR--LAPEH---------- 129 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr--~~~~~---------- 129 (229)
.+.+.+|+|+... .++.|+|+++||++-. ............++.+.|+.||++|+. +....
T Consensus 26 ~~~~~v~~P~~~~----~~~~P~vvllHG~~~~---~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~ 98 (275)
T TIGR02821 26 PMTFGVFLPPQAA----AGPVPVLWYLSGLTCT---HENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGK 98 (275)
T ss_pred ceEEEEEcCCCcc----CCCCCEEEEccCCCCC---ccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccC
Confidence 3678899998642 2568999999996532 222111223456767779999999973 22100
Q ss_pred --C-C------C-----chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeE
Q 040311 130 --R-L------P-----AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKG 195 (229)
Q Consensus 130 --~-~------~-----~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g 195 (229)
. + + .....+...+..+.+.. .++|.++++++|+|+||++|+.++.+.++ .+++
T Consensus 99 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--------~~~~ 165 (275)
T TIGR02821 99 GAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQ-----FPLDGERQGITGHSMGGHGALVIALKNPD--------RFKS 165 (275)
T ss_pred CccccccCCcCcccccchHHHHHHHHHHHHHHhh-----CCCCCCceEEEEEChhHHHHHHHHHhCcc--------cceE
Confidence 0 0 0 00112122222222211 25788999999999999999999999887 5889
Q ss_pred EEe-ccccCCC
Q 040311 196 LLL-FPFFGAI 205 (229)
Q Consensus 196 ~il-~P~~~~~ 205 (229)
+++ +|+.+..
T Consensus 166 ~~~~~~~~~~~ 176 (275)
T TIGR02821 166 VSAFAPIVAPS 176 (275)
T ss_pred EEEECCccCcc
Confidence 999 9987643
No 27
>PRK10566 esterase; Provisional
Probab=99.39 E-value=1.1e-11 Score=101.57 Aligned_cols=106 Identities=21% Similarity=0.095 Sum_probs=72.6
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-------CCC--
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-------RLP-- 132 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-------~~~-- 132 (229)
++....|.|.+.. +++.|+||++||++. +.. .+..++..++ +.|+.|+.+|||+.+.. ...
T Consensus 11 ~~~~~~~~p~~~~----~~~~p~vv~~HG~~~---~~~--~~~~~~~~l~-~~G~~v~~~d~~g~G~~~~~~~~~~~~~~ 80 (249)
T PRK10566 11 GIEVLHAFPAGQR----DTPLPTVFFYHGFTS---SKL--VYSYFAVALA-QAGFRVIMPDAPMHGARFSGDEARRLNHF 80 (249)
T ss_pred CcceEEEcCCCCC----CCCCCEEEEeCCCCc---ccc--hHHHHHHHHH-hCCCEEEEecCCcccccCCCccccchhhH
Confidence 3444456676431 146799999999542 222 2455666665 46999999999975421 111
Q ss_pred -----chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 133 -----AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 133 -----~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
..++|+..+++++.+.. .+|.++|+++|||+||.+++.++.+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~------~~~~~~i~v~G~S~Gg~~al~~~~~~~~ 130 (249)
T PRK10566 81 WQILLQNMQEFPTLRAAIREEG------WLLDDRLAVGGASMGGMTALGIMARHPW 130 (249)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC------CcCccceeEEeecccHHHHHHHHHhCCC
Confidence 12466667777776642 4788999999999999999999887765
No 28
>PLN02511 hydrolase
Probab=99.38 E-value=1.5e-11 Score=107.56 Aligned_cols=160 Identities=10% Similarity=-0.017 Sum_probs=98.3
Q ss_pred cccceEEcCCCcEEecCCCCCCCCCCCCCCCCCceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccc
Q 040311 16 KHLQIVVNPDGTITRSLISPSTEATPDPVNDDAVVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIF 95 (229)
Q Consensus 16 ~~~~~~~~~~~~~~r~~~~p~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~ 95 (229)
.|.|-.++.++.++.+...=... .+.. ....+.+...+++.+.++++.+.... .....|+||++||.+
T Consensus 43 ~y~p~~wl~n~h~qT~~~~~~~~-~~~~-----~~~re~l~~~DG~~~~ldw~~~~~~~---~~~~~p~vvllHG~~--- 110 (388)
T PLN02511 43 PYDAFPLLGNRHVETIFASFFRS-LPAV-----RYRRECLRTPDGGAVALDWVSGDDRA---LPADAPVLILLPGLT--- 110 (388)
T ss_pred CccCCccCCCccHHHhhHHHhcC-CCCC-----ceeEEEEECCCCCEEEEEecCccccc---CCCCCCEEEEECCCC---
Confidence 35555667788888765221111 1111 23344455555555666665432211 114568999999942
Q ss_pred cCCCCcchH-HHHHHHHhhCCcEEEEEecCCCCCCCC-------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEec
Q 040311 96 FSAASSLSH-EFCSNVAVELPAIVVSVDYRLAPEHRL-------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGS 167 (229)
Q Consensus 96 g~~~~~~~~-~~~~~~~~~~g~~vv~~dyr~~~~~~~-------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~ 167 (229)
|+... .|. .++..+ .+.|+.|+++|+|+++.... ....+|+..+++++..... ..+++++|+
T Consensus 111 g~s~~-~y~~~~~~~~-~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~--------~~~~~lvG~ 180 (388)
T PLN02511 111 GGSDD-SYVRHMLLRA-RSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYP--------SANLYAAGW 180 (388)
T ss_pred CCCCC-HHHHHHHHHH-HHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCC--------CCCEEEEEe
Confidence 12221 132 233334 35799999999998764432 2447899999999887532 258999999
Q ss_pred chhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 168 SAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 168 S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
|+||++++.++.+.++ . ..|.++++ ++..+
T Consensus 181 SlGg~i~~~yl~~~~~----~--~~v~~~v~is~p~~ 211 (388)
T PLN02511 181 SLGANILVNYLGEEGE----N--CPLSGAVSLCNPFD 211 (388)
T ss_pred chhHHHHHHHHHhcCC----C--CCceEEEEECCCcC
Confidence 9999999999988765 1 13667666 54444
No 29
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.36 E-value=1.2e-11 Score=100.01 Aligned_cols=106 Identities=21% Similarity=0.250 Sum_probs=82.9
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC----CchHHHHHHHHHHHHHhcchhhhc
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL----PAAYDDAMDALHWIKNTQDDWLMK 155 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~----~~~~~D~~~a~~~l~~~~~~~~~~ 155 (229)
...++++|.||.....| ....+...+....+++++.+||++.+.... .....|+.++++|+++..
T Consensus 58 ~~~~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~------ 126 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRY------ 126 (258)
T ss_pred ccceEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhc------
Confidence 45689999999866555 133455666666799999999997543222 256799999999999985
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
| ..++|+|+|+|+|...++.+|.+. +++|+|| +|++++.+.
T Consensus 127 g-~~~~Iil~G~SiGt~~tv~Lasr~----------~~~alVL~SPf~S~~rv 168 (258)
T KOG1552|consen 127 G-SPERIILYGQSIGTVPTVDLASRY----------PLAAVVLHSPFTSGMRV 168 (258)
T ss_pred C-CCceEEEEEecCCchhhhhHhhcC----------CcceEEEeccchhhhhh
Confidence 5 678999999999999988888775 2789999 999986554
No 30
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.34 E-value=1.7e-11 Score=103.53 Aligned_cols=119 Identities=24% Similarity=0.224 Sum_probs=83.3
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC-----CCchHH
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR-----LPAAYD 136 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~-----~~~~~~ 136 (229)
.+.++.|.+.. .+..+||.+||.+...+. |..++..++ ..||.|+++|.|+.+... ....+.
T Consensus 21 ~~~~~~~~~~~-------~~~g~Vvl~HG~~Eh~~r-----y~~la~~l~-~~G~~V~~~D~RGhG~S~r~~rg~~~~f~ 87 (298)
T COG2267 21 RLRYRTWAAPE-------PPKGVVVLVHGLGEHSGR-----YEELADDLA-ARGFDVYALDLRGHGRSPRGQRGHVDSFA 87 (298)
T ss_pred eEEEEeecCCC-------CCCcEEEEecCchHHHHH-----HHHHHHHHH-hCCCEEEEecCCCCCCCCCCCcCCchhHH
Confidence 35556665543 233899999997665332 666777776 569999999999865543 222344
Q ss_pred HHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 137 DAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 137 D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
|....++.+.+.... .....+++|+||||||.+|+..+.+.+. +++|+|+ +|++...
T Consensus 88 ~~~~dl~~~~~~~~~----~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--------~i~~~vLssP~~~l~ 145 (298)
T COG2267 88 DYVDDLDAFVETIAE----PDPGLPVFLLGHSMGGLIALLYLARYPP--------RIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHHHHhc----cCCCCCeEEEEeCcHHHHHHHHHHhCCc--------cccEEEEECccccCC
Confidence 444444444443321 1223689999999999999999999876 7999999 9999877
No 31
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.34 E-value=1.6e-11 Score=99.91 Aligned_cols=110 Identities=21% Similarity=0.286 Sum_probs=81.2
Q ss_pred EeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC
Q 040311 52 SKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL 131 (229)
Q Consensus 52 ~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~ 131 (229)
.+++.+++.+ +.+++|+-.... ...|++++.||||+..-+ +..++..+..+..+.|+++|.|+.++...
T Consensus 50 kedv~i~~~~-~t~n~Y~t~~~~-----t~gpil~l~HG~G~S~LS-----fA~~a~el~s~~~~r~~a~DlRgHGeTk~ 118 (343)
T KOG2564|consen 50 KEDVSIDGSD-LTFNVYLTLPSA-----TEGPILLLLHGGGSSALS-----FAIFASELKSKIRCRCLALDLRGHGETKV 118 (343)
T ss_pred ccccccCCCc-ceEEEEEecCCC-----CCccEEEEeecCcccchh-----HHHHHHHHHhhcceeEEEeeccccCcccc
Confidence 4566665544 377778755433 567999999999886433 66788889888889999999999887665
Q ss_pred C--------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 132 P--------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 132 ~--------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
. ....|+-+.++.+. +-.+.+|+|+||||||.+|.+.|...
T Consensus 119 ~~e~dlS~eT~~KD~~~~i~~~f---------ge~~~~iilVGHSmGGaIav~~a~~k 167 (343)
T KOG2564|consen 119 ENEDDLSLETMSKDFGAVIKELF---------GELPPQIILVGHSMGGAIAVHTAASK 167 (343)
T ss_pred CChhhcCHHHHHHHHHHHHHHHh---------ccCCCceEEEeccccchhhhhhhhhh
Confidence 4 34566666555544 33456899999999999998877654
No 32
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.32 E-value=1e-11 Score=97.72 Aligned_cols=133 Identities=15% Similarity=0.195 Sum_probs=102.2
Q ss_pred CCceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC
Q 040311 47 DAVVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA 126 (229)
Q Consensus 47 ~~~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~ 126 (229)
..++..+.+.....+.+.++.|.-... ..+|+++|+|+.+-.+|.. -..+.-+....+++|+.++||+.
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmGhr-----~~i~~~fy~~l~mnv~ivsYRGY 117 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMGHR-----LPIARVFYVNLKMNVLIVSYRGY 117 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCcccch-----hhHHHHHHHHcCceEEEEEeecc
Confidence 456667778888888888887776532 5789999999964444431 23455566678999999999975
Q ss_pred CCC---CCCch-HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 127 PEH---RLPAA-YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 127 ~~~---~~~~~-~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+.. +.... .-|..++++|+..+. ..|..+++|.|.|.||+.|+.+|....+ ++.++|+ .-|
T Consensus 118 G~S~GspsE~GL~lDs~avldyl~t~~------~~dktkivlfGrSlGGAvai~lask~~~--------ri~~~ivENTF 183 (300)
T KOG4391|consen 118 GKSEGSPSEEGLKLDSEAVLDYLMTRP------DLDKTKIVLFGRSLGGAVAIHLASKNSD--------RISAIIVENTF 183 (300)
T ss_pred ccCCCCccccceeccHHHHHHHHhcCc------cCCcceEEEEecccCCeeEEEeeccchh--------heeeeeeechh
Confidence 433 22333 479999999999875 5688999999999999999999998877 7889998 888
Q ss_pred cCC
Q 040311 202 FGA 204 (229)
Q Consensus 202 ~~~ 204 (229)
++.
T Consensus 184 ~SI 186 (300)
T KOG4391|consen 184 LSI 186 (300)
T ss_pred ccc
Confidence 765
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.32 E-value=5.6e-11 Score=104.13 Aligned_cols=118 Identities=19% Similarity=0.238 Sum_probs=80.7
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC--------Cc
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL--------PA 133 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~--------~~ 133 (229)
.+.++.|.|... +++++||++||.+-. ...|..++..++ +.||.|+++|+++.+.... ..
T Consensus 122 ~l~~~~~~p~~~------~~~~~Vl~lHG~~~~-----~~~~~~~a~~L~-~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~ 189 (395)
T PLN02652 122 ALFCRSWAPAAG------EMRGILIIIHGLNEH-----SGRYLHFAKQLT-SCGFGVYAMDWIGHGGSDGLHGYVPSLDY 189 (395)
T ss_pred EEEEEEecCCCC------CCceEEEEECCchHH-----HHHHHHHHHHHH-HCCCEEEEeCCCCCCCCCCCCCCCcCHHH
Confidence 466677877533 467899999995321 112555677775 4599999999998654322 12
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
..+|+..+++++.... +..+++|+|||+||.+++.++. .++ ....++++|+ +|++...
T Consensus 190 ~~~Dl~~~l~~l~~~~--------~~~~i~lvGhSmGG~ial~~a~-~p~-----~~~~v~glVL~sP~l~~~ 248 (395)
T PLN02652 190 VVEDTEAFLEKIRSEN--------PGVPCFLFGHSTGGAVVLKAAS-YPS-----IEDKLEGIVLTSPALRVK 248 (395)
T ss_pred HHHHHHHHHHHHHHhC--------CCCCEEEEEECHHHHHHHHHHh-ccC-----cccccceEEEECcccccc
Confidence 3567777777776542 1247999999999999987764 332 1225899999 9997654
No 34
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.31 E-value=7.1e-11 Score=98.63 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=77.4
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCC-cccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC-----CCchHH
Q 040311 63 TWVRIFVPRQALDSPSSTKLPLIVDFHGG-GFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR-----LPAAYD 136 (229)
Q Consensus 63 ~~~~i~~P~~~~~~~~~~~~pviv~iHGG-g~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~-----~~~~~~ 136 (229)
+...++.|.+. . .+.||++||| ++..|+... +..+++.++ +.|+.|+++|+++.+... +.....
T Consensus 14 l~g~~~~p~~~------~-~~~vv~i~gg~~~~~g~~~~--~~~la~~l~-~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~ 83 (274)
T TIGR03100 14 LVGVLHIPGAS------H-TTGVLIVVGGPQYRVGSHRQ--FVLLARRLA-EAGFPVLRFDYRGMGDSEGENLGFEGIDA 83 (274)
T ss_pred EEEEEEcCCCC------C-CCeEEEEeCCccccCCchhH--HHHHHHHHH-HCCCEEEEeCCCCCCCCCCCCCCHHHHHH
Confidence 55556677542 2 3456666654 344444322 344556665 469999999999865432 223457
Q ss_pred HHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 137 DAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 137 D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
|+.++++++.+... ..++|+++|||+||.+++.++.+. . .|+++|+ +|++..
T Consensus 84 d~~~~~~~l~~~~~-------g~~~i~l~G~S~Gg~~a~~~a~~~-~--------~v~~lil~~p~~~~ 136 (274)
T TIGR03100 84 DIAAAIDAFREAAP-------HLRRIVAWGLCDAASAALLYAPAD-L--------RVAGLVLLNPWVRT 136 (274)
T ss_pred HHHHHHHHHHhhCC-------CCCcEEEEEECHHHHHHHHHhhhC-C--------CccEEEEECCccCC
Confidence 88999999876531 226799999999999998887543 2 5999999 998653
No 35
>PRK10749 lysophospholipase L2; Provisional
Probab=99.29 E-value=8e-11 Score=100.85 Aligned_cols=102 Identities=18% Similarity=0.112 Sum_probs=70.3
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC-------------CchHHHHHHHHHHHHH
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL-------------PAAYDDAMDALHWIKN 147 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~-------------~~~~~D~~~a~~~l~~ 147 (229)
+.++||++||.+.. ...|..++..++ +.|+.|+++|+|+.+.... ....+|+...++.+.+
T Consensus 53 ~~~~vll~HG~~~~-----~~~y~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 126 (330)
T PRK10749 53 HDRVVVICPGRIES-----YVKYAELAYDLF-HLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQ 126 (330)
T ss_pred CCcEEEEECCccch-----HHHHHHHHHHHH-HCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHh
Confidence 34689999994321 122566666665 4699999999998654321 1123444444443322
Q ss_pred hcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 148 TQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 148 ~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
..+..+++++|||+||.+++.++.+.++ .++++|+ +|....
T Consensus 127 --------~~~~~~~~l~GhSmGG~ia~~~a~~~p~--------~v~~lvl~~p~~~~ 168 (330)
T PRK10749 127 --------PGPYRKRYALAHSMGGAILTLFLQRHPG--------VFDAIALCAPMFGI 168 (330)
T ss_pred --------cCCCCCeEEEEEcHHHHHHHHHHHhCCC--------CcceEEEECchhcc
Confidence 2244789999999999999999988877 6899999 998654
No 36
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.28 E-value=1.6e-10 Score=97.50 Aligned_cols=124 Identities=15% Similarity=0.122 Sum_probs=81.2
Q ss_pred EEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC
Q 040311 51 LSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR 130 (229)
Q Consensus 51 ~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~ 130 (229)
..+.+..++.++..+++++-.... ...|.|||+||.+. +.. .|...+..+. +.||.|+++|.++.+...
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~-----~~~~~lvliHG~~~---~~~--~w~~~~~~L~-~~gy~vi~~Dl~G~G~S~ 88 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGP-----ADGPPVLLLHGEPS---WSY--LYRKMIPILA-AAGHRVIAPDLIGFGRSD 88 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCC-----CCCCEEEEECCCCC---chh--hHHHHHHHHH-hCCCEEEEECCCCCCCCC
Confidence 355667776666666666554321 23578999999532 122 2555666664 459999999999876543
Q ss_pred CCc-----hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 131 LPA-----AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 131 ~~~-----~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
.+. .+++....+.-+.++. +.+++.|+|||+||.+|+.++.++++ .|+++++ +|.
T Consensus 89 ~~~~~~~~~~~~~a~~l~~~l~~l--------~~~~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~ 149 (302)
T PRK00870 89 KPTRREDYTYARHVEWMRSWFEQL--------DLTDVTLVCQDWGGLIGLRLAAEHPD--------RFARLVVANTG 149 (302)
T ss_pred CCCCcccCCHHHHHHHHHHHHHHc--------CCCCEEEEEEChHHHHHHHHHHhChh--------heeEEEEeCCC
Confidence 221 2333333333333322 33589999999999999999999887 6999999 764
No 37
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.27 E-value=8e-11 Score=100.25 Aligned_cols=129 Identities=25% Similarity=0.328 Sum_probs=88.9
Q ss_pred CceEEeeEEEcCCCCE--EEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCC
Q 040311 48 AVVLSKDVTVNQSKNT--WVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRL 125 (229)
Q Consensus 48 ~~~~~~~v~~~~~~~~--~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~ 125 (229)
..+...++.+.+.++. ...++.|++.. ++.|+||.+||.|...+. .... ..++ ..|+.|+.+|.|+
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~~-----~~~Pavv~~hGyg~~~~~-----~~~~-~~~a-~~G~~vl~~d~rG 119 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNAK-----GKLPAVVQFHGYGGRSGD-----PFDL-LPWA-AAGYAVLAMDVRG 119 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-SS-----SSEEEEEEE--TT--GGG-----HHHH-HHHH-HTT-EEEEE--TT
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCCC-----CCcCEEEEecCCCCCCCC-----cccc-cccc-cCCeEEEEecCCC
Confidence 3688889999887774 45677888543 789999999995432111 2222 2344 5699999999886
Q ss_pred CCCC------------------CC---C------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHH
Q 040311 126 APEH------------------RL---P------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 126 ~~~~------------------~~---~------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a 178 (229)
.+.. .. + ..+.|+..+++++.+.. .+|.+||++.|.|.||++++.+|
T Consensus 120 qg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slp------evD~~rI~v~G~SqGG~lal~~a 193 (320)
T PF05448_consen 120 QGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLP------EVDGKRIGVTGGSQGGGLALAAA 193 (320)
T ss_dssp TSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTST------TEEEEEEEEEEETHHHHHHHHHH
T ss_pred CCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCC------CcCcceEEEEeecCchHHHHHHH
Confidence 4310 00 1 24689999999999874 67999999999999999999999
Q ss_pred HHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 179 LRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 179 ~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.-.+. |+++++ .|++.
T Consensus 194 aLd~r---------v~~~~~~vP~l~ 210 (320)
T PF05448_consen 194 ALDPR---------VKAAAADVPFLC 210 (320)
T ss_dssp HHSST----------SEEEEESESSS
T ss_pred HhCcc---------ccEEEecCCCcc
Confidence 87654 999999 99874
No 38
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.26 E-value=5.5e-10 Score=96.28 Aligned_cols=163 Identities=15% Similarity=0.051 Sum_probs=111.5
Q ss_pred ccceEEcCCCcEEecCCCCCCCCCCCCCCCCCceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCccccc
Q 040311 17 HLQIVVNPDGTITRSLISPSTEATPDPVNDDAVVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFF 96 (229)
Q Consensus 17 ~~~~~~~~~~~~~r~~~~p~~~~~~~p~~~~~~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g 96 (229)
|+|.-+...|++|.+...=.. ..+.+ ...++-+...+++.+.+|++.+....+..+....|+||++||- .|
T Consensus 66 y~p~~w~~~ghlQT~~~~~~~-~~p~~-----~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGl---tg 136 (409)
T KOG1838|consen 66 YLPTLWLFSGHLQTLLLSFFG-SKPPV-----EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGL---TG 136 (409)
T ss_pred cccceeecCCeeeeeehhhcC-CCCCC-----cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCC---CC
Confidence 445556778888887522111 12222 2456667777888899999987765311123567999999992 22
Q ss_pred CCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC-------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecch
Q 040311 97 SAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP-------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSA 169 (229)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~-------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~ 169 (229)
+... .|-.-+...+.+.||.||.+|.|++...... ...+|+..++++++++... .+++.+|.|+
T Consensus 137 ~S~~-~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~--------a~l~avG~S~ 207 (409)
T KOG1838|consen 137 GSHE-SYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQ--------APLFAVGFSM 207 (409)
T ss_pred CChh-HHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCC--------CceEEEEecc
Confidence 2222 2544445556678999999999997654432 3469999999999998654 6899999999
Q ss_pred hHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 170 GGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 170 GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
||++...+..+..+ ...-++|+.+ +||-
T Consensus 208 Gg~iL~nYLGE~g~-----~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 208 GGNILTNYLGEEGD-----NTPLIAAVAVCNPWD 236 (409)
T ss_pred hHHHHHHHhhhccC-----CCCceeEEEEeccch
Confidence 99998888776655 2234677777 8984
No 39
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.26 E-value=7.2e-11 Score=88.33 Aligned_cols=94 Identities=28% Similarity=0.324 Sum_probs=70.5
Q ss_pred EEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEE
Q 040311 84 LIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCF 163 (229)
Q Consensus 84 viv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~ 163 (229)
+||++||++.. ...+..+...++.. |+.|+.+||+..... ....+...+++++.+. ..++++|+
T Consensus 1 ~vv~~HG~~~~-----~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~-------~~~~~~i~ 64 (145)
T PF12695_consen 1 VVVLLHGWGGS-----RRDYQPLAEALAEQ-GYAVVAFDYPGHGDS---DGADAVERVLADIRAG-------YPDPDRII 64 (145)
T ss_dssp EEEEECTTTTT-----THHHHHHHHHHHHT-TEEEEEESCTTSTTS---HHSHHHHHHHHHHHHH-------HCTCCEEE
T ss_pred CEEEECCCCCC-----HHHHHHHHHHHHHC-CCEEEEEecCCCCcc---chhHHHHHHHHHHHhh-------cCCCCcEE
Confidence 58999996542 22366777777755 999999999987654 3334566666665422 23779999
Q ss_pred EEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 164 LIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 164 l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
|+|||+||.+++.++.+.+ +++++|+ +|+.
T Consensus 65 l~G~S~Gg~~a~~~~~~~~---------~v~~~v~~~~~~ 95 (145)
T PF12695_consen 65 LIGHSMGGAIAANLAARNP---------RVKAVVLLSPYP 95 (145)
T ss_dssp EEEETHHHHHHHHHHHHST---------TESEEEEESESS
T ss_pred EEEEccCcHHHHHHhhhcc---------ceeEEEEecCcc
Confidence 9999999999999998763 5999999 9963
No 40
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.25 E-value=1.5e-11 Score=98.70 Aligned_cols=90 Identities=19% Similarity=0.171 Sum_probs=69.2
Q ss_pred HHHHHHhhCCcEEEEEecCCCCCCC----------C-CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHH
Q 040311 106 FCSNVAVELPAIVVSVDYRLAPEHR----------L-PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIA 174 (229)
Q Consensus 106 ~~~~~~~~~g~~vv~~dyr~~~~~~----------~-~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la 174 (229)
....++ +.||+|+.+|||++.+.. + ...++|+.++++|+.++. .+|++||+|+|+|+||+++
T Consensus 6 ~~~~la-~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~------~iD~~ri~i~G~S~GG~~a 78 (213)
T PF00326_consen 6 NAQLLA-SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQY------YIDPDRIGIMGHSYGGYLA 78 (213)
T ss_dssp HHHHHH-TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTT------SEEEEEEEEEEETHHHHHH
T ss_pred HHHHHH-hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccc------cccceeEEEEccccccccc
Confidence 334444 569999999999986421 1 245899999999998874 6899999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCCChh
Q 040311 175 YYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKRTTS 210 (229)
Q Consensus 175 ~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~~~~ 210 (229)
+.++.+.++ .++++++ +|+++.......
T Consensus 79 ~~~~~~~~~--------~f~a~v~~~g~~d~~~~~~~ 107 (213)
T PF00326_consen 79 LLAATQHPD--------RFKAAVAGAGVSDLFSYYGT 107 (213)
T ss_dssp HHHHHHTCC--------GSSEEEEESE-SSTTCSBHH
T ss_pred chhhcccce--------eeeeeeccceecchhccccc
Confidence 999998777 6789999 999887665433
No 41
>PLN02442 S-formylglutathione hydrolase
Probab=99.24 E-value=2.6e-10 Score=95.70 Aligned_cols=125 Identities=18% Similarity=0.205 Sum_probs=78.2
Q ss_pred CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC-----CC------
Q 040311 61 KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP-----EH------ 129 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~-----~~------ 129 (229)
..+.+.+|+|+.. ..++.|+|+++||++. +........-+..++...|+.||.+|....+ ..
T Consensus 30 ~~~~~~vy~P~~~----~~~~~Pvv~~lHG~~~---~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~ 102 (283)
T PLN02442 30 CSMTFSVYFPPAS----DSGKVPVLYWLSGLTC---TDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFG 102 (283)
T ss_pred CceEEEEEcCCcc----cCCCCCEEEEecCCCc---ChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccC
Confidence 3588999999843 2367899999999542 2221111112334555679999999964221 00
Q ss_pred ---C-C-----C-----chHHHH-HHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCccee
Q 040311 130 ---R-L-----P-----AAYDDA-MDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIK 194 (229)
Q Consensus 130 ---~-~-----~-----~~~~D~-~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~ 194 (229)
. + + .....+ .....++.+... .+|.++++|+|+|+||++|+.++.++++ .++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-----~~~~~~~~i~G~S~GG~~a~~~a~~~p~--------~~~ 169 (283)
T PLN02442 103 VGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD-----QLDTSRASIFGHSMGGHGALTIYLKNPD--------KYK 169 (283)
T ss_pred CCcceeeccccCCCcccchhhhHHHHHHHHHHHHHH-----hcCCCceEEEEEChhHHHHHHHHHhCch--------hEE
Confidence 0 0 0 001111 122223333221 3578899999999999999999999887 688
Q ss_pred EEEe-ccccCCC
Q 040311 195 GLLL-FPFFGAI 205 (229)
Q Consensus 195 g~il-~P~~~~~ 205 (229)
++++ +|..+..
T Consensus 170 ~~~~~~~~~~~~ 181 (283)
T PLN02442 170 SVSAFAPIANPI 181 (283)
T ss_pred EEEEECCccCcc
Confidence 8888 9887643
No 42
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.24 E-value=2.3e-10 Score=94.46 Aligned_cols=122 Identities=20% Similarity=0.251 Sum_probs=87.1
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC--------CCc
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR--------LPA 133 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~--------~~~ 133 (229)
.+....|.|.... +++..|+++||.|.. .+..|..++..++ ..|+.|+++||++.+... +..
T Consensus 39 ~lft~~W~p~~~~-----~pr~lv~~~HG~g~~----~s~~~~~~a~~l~-~~g~~v~a~D~~GhG~SdGl~~yi~~~d~ 108 (313)
T KOG1455|consen 39 KLFTQSWLPLSGT-----EPRGLVFLCHGYGEH----SSWRYQSTAKRLA-KSGFAVYAIDYEGHGRSDGLHAYVPSFDL 108 (313)
T ss_pred EeEEEecccCCCC-----CCceEEEEEcCCccc----chhhHHHHHHHHH-hCCCeEEEeeccCCCcCCCCcccCCcHHH
Confidence 3667889997643 688999999995432 2223667788886 469999999999865322 223
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
.++|+..-++.++.+.+ ..--..+|+||||||++++.++.+.++ ...|+|+ +|+.-..+.
T Consensus 109 ~v~D~~~~~~~i~~~~e------~~~lp~FL~GeSMGGAV~Ll~~~k~p~--------~w~G~ilvaPmc~i~~~ 169 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREE------NKGLPRFLFGESMGGAVALLIALKDPN--------FWDGAILVAPMCKISED 169 (313)
T ss_pred HHHHHHHHHHHHhhccc------cCCCCeeeeecCcchHHHHHHHhhCCc--------ccccceeeecccccCCc
Confidence 45677666666555432 122468999999999999999998766 5789999 998755443
No 43
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.24 E-value=7.6e-11 Score=107.66 Aligned_cols=123 Identities=15% Similarity=0.095 Sum_probs=87.0
Q ss_pred CCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC-----C-Cc
Q 040311 60 SKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR-----L-PA 133 (229)
Q Consensus 60 ~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~-----~-~~ 133 (229)
+..+..++|.|++. ++.|+||++||.|......... .......++ +.||.|+.+|+|+..... + ..
T Consensus 6 G~~L~~~~~~P~~~------~~~P~Il~~~gyg~~~~~~~~~-~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g~~~~~~~~ 77 (550)
T TIGR00976 6 GTRLAIDVYRPAGG------GPVPVILSRTPYGKDAGLRWGL-DKTEPAWFV-AQGYAVVIQDTRGRGASEGEFDLLGSD 77 (550)
T ss_pred CCEEEEEEEecCCC------CCCCEEEEecCCCCchhhcccc-ccccHHHHH-hCCcEEEEEeccccccCCCceEecCcc
Confidence 33477789999753 5789999999965432100000 112334444 569999999999754321 2 45
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
..+|+..+++|+.++. ..+ .+|+++|+|+||.+++.+|...+. .+++++. +++.+..
T Consensus 78 ~~~D~~~~i~~l~~q~------~~~-~~v~~~G~S~GG~~a~~~a~~~~~--------~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 78 EAADGYDLVDWIAKQP------WCD-GNVGMLGVSYLAVTQLLAAVLQPP--------ALRAIAPQEGVWDLY 135 (550)
T ss_pred cchHHHHHHHHHHhCC------CCC-CcEEEEEeChHHHHHHHHhccCCC--------ceeEEeecCcccchh
Confidence 6799999999998763 223 699999999999999999887655 6899999 8876643
No 44
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.24 E-value=1.3e-10 Score=94.04 Aligned_cols=126 Identities=22% Similarity=0.263 Sum_probs=94.6
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHH
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDA 141 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a 141 (229)
..++.|+.|... +..|+|+|+||- . .....|..+++.++. .||+||+++....-.......+++...+
T Consensus 32 PkpLlI~tP~~~------G~yPVilF~HG~--~---l~ns~Ys~lL~HIAS-HGfIVVAPQl~~~~~p~~~~Ei~~aa~V 99 (307)
T PF07224_consen 32 PKPLLIVTPSEA------GTYPVILFLHGF--N---LYNSFYSQLLAHIAS-HGFIVVAPQLYTLFPPDGQDEIKSAASV 99 (307)
T ss_pred CCCeEEecCCcC------CCccEEEEeech--h---hhhHHHHHHHHHHhh-cCeEEEechhhcccCCCchHHHHHHHHH
Confidence 366778999855 789999999993 2 223347788888875 6999999994432223445668899999
Q ss_pred HHHHHHhcchhhhcC--CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 142 LHWIKNTQDDWLMKH--ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 142 ~~~l~~~~~~~~~~~--~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
++|+.+.+...+..+ .+..+++++|||.||..|.++|+.+. ...+++++|- -|+-...
T Consensus 100 ~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a------~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 100 INWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA------TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc------ccCchhheecccccCCCC
Confidence 999999876665555 46679999999999999999999764 2356888888 7875543
No 45
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.19 E-value=2.9e-10 Score=99.99 Aligned_cols=107 Identities=21% Similarity=0.289 Sum_probs=67.5
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCch-HHHHHHHHHHHHHhcchhhhcCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAA-YDDAMDALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~-~~D~~~a~~~l~~~~~~~~~~~~d 158 (229)
+..|+||++||.|... . .|...+..++ + ++.|+++|+++.+....+.. ..+...+.+++.+...+|+. ..+
T Consensus 103 ~~~p~vvllHG~~~~~---~--~~~~~~~~L~-~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~-~l~ 174 (402)
T PLN02894 103 EDAPTLVMVHGYGASQ---G--FFFRNFDALA-S-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRK-AKN 174 (402)
T ss_pred CCCCEEEEECCCCcch---h--HHHHHHHHHH-h-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHH-HcC
Confidence 3568999999965421 1 2444555554 3 69999999998765433221 11222222222222222211 124
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
.++++|+|||+||.+|+.++.++++ .++++|+ +|..
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~~p~--------~v~~lvl~~p~~ 211 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALKHPE--------HVQHLILVGPAG 211 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHhCch--------hhcEEEEECCcc
Confidence 4689999999999999999999887 6899999 7764
No 46
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.18 E-value=5.4e-10 Score=88.27 Aligned_cols=97 Identities=24% Similarity=0.259 Sum_probs=68.9
Q ss_pred EEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC-----chHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 85 IVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP-----AAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 85 iv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~-----~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
||++||.+.. . ..|..++..++ .|+.|+++|+++.+....+ ..+++....+..+.+.. ..
T Consensus 1 vv~~hG~~~~---~--~~~~~~~~~l~--~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~--------~~ 65 (228)
T PF12697_consen 1 VVFLHGFGGS---S--ESWDPLAEALA--RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL--------GI 65 (228)
T ss_dssp EEEE-STTTT---G--GGGHHHHHHHH--TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT--------TT
T ss_pred eEEECCCCCC---H--HHHHHHHHHHh--CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc--------cc
Confidence 7999996543 2 23667777774 5999999999986554332 23444444444444433 22
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
++++|+|||+||.+++.++.++++ .|+++++ +|....
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~~~~~ 103 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAARYPD--------RVKGLVLLSPPPPL 103 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHHSGG--------GEEEEEEESESSSH
T ss_pred cccccccccccccccccccccccc--------ccccceeecccccc
Confidence 689999999999999999999887 7999999 888743
No 47
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.17 E-value=9.8e-11 Score=96.11 Aligned_cols=124 Identities=18% Similarity=0.184 Sum_probs=77.0
Q ss_pred CCEEEEEEEeCCCCCCCCCCCc-cEEEEEcCCcccccCCCCcchHHH--HHHHHhhCCcEEEEEecCCC---CCCCCCch
Q 040311 61 KNTWVRIFVPRQALDSPSSTKL-PLIVDFHGGGFIFFSAASSLSHEF--CSNVAVELPAIVVSVDYRLA---PEHRLPAA 134 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~-pviv~iHGGg~~~g~~~~~~~~~~--~~~~~~~~g~~vv~~dyr~~---~~~~~~~~ 134 (229)
..+.+++|.|++.. +++++ |+++|+||+|....+.....+... ......+-+|.|+++.|.-- .+..-...
T Consensus 172 neLkYrly~Pkdy~---pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~ 248 (387)
T COG4099 172 NELKYRLYTPKDYA---PDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLY 248 (387)
T ss_pred ceeeEEEecccccC---CCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchh
Confidence 45889999998765 44666 999999998876433322111110 11111234567777776531 11111122
Q ss_pred HHHHHHHHH-HHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 135 YDDAMDALH-WIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 135 ~~D~~~a~~-~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+......++ -+.++ ..+|.+||++.|.|+||..+..++.++|+ .++|.++ ++-
T Consensus 249 l~~~idli~~vlas~------ynID~sRIYviGlSrG~~gt~al~~kfPd--------fFAaa~~iaG~ 303 (387)
T COG4099 249 LIEKIDLILEVLAST------YNIDRSRIYVIGLSRGGFGTWALAEKFPD--------FFAAAVPIAGG 303 (387)
T ss_pred HHHHHHHHHHHHhhc------cCcccceEEEEeecCcchhhHHHHHhCch--------hhheeeeecCC
Confidence 233333333 33333 38999999999999999999999999999 5667766 544
No 48
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.16 E-value=5.4e-10 Score=93.42 Aligned_cols=106 Identities=22% Similarity=0.237 Sum_probs=71.3
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchH-------HHHHHHHHHHHHhcchh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAY-------DDAMDALHWIKNTQDDW 152 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~-------~D~~~a~~~l~~~~~~~ 152 (229)
..+|++|++||.+. +.....+..+...+..+.++.|+++||+......++... +++...++++.+..
T Consensus 34 ~~~p~vilIHG~~~---~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~--- 107 (275)
T cd00707 34 PSRPTRFIIHGWTS---SGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNT--- 107 (275)
T ss_pred CCCCcEEEEcCCCC---CCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhc---
Confidence 45789999999322 221211233445555556899999999976444443322 34455555555442
Q ss_pred hhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 153 LMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 153 ~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+.+.+++.|+|||+||++|..++.+.++ +|+.+++ .|..
T Consensus 108 ---g~~~~~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa~ 147 (275)
T cd00707 108 ---GLSLENVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPAG 147 (275)
T ss_pred ---CCChHHEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCCc
Confidence 5677899999999999999999988766 5778887 6553
No 49
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.16 E-value=8.6e-11 Score=100.37 Aligned_cols=134 Identities=19% Similarity=0.189 Sum_probs=78.0
Q ss_pred CceEEeeEEEcCCCC--EEEEEEEeCCCCCCCCCCCccEEEEEcCCccc----ccCCC---------CcchHHHHHHHHh
Q 040311 48 AVVLSKDVTVNQSKN--TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFI----FFSAA---------SSLSHEFCSNVAV 112 (229)
Q Consensus 48 ~~~~~~~v~~~~~~~--~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~----~g~~~---------~~~~~~~~~~~~~ 112 (229)
.+++.+.+.+....+ ++..+++|++.. ++.|.||++||-|.. .|... ......+...++
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~~-----~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA- 157 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGAK-----GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA- 157 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT-------S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH-
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCCC-----CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH-
Confidence 456666677766654 666788899854 789999999982221 11110 000123556665
Q ss_pred hCCcEEEEEecCCCCCC----------CCC-----------------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEE
Q 040311 113 ELPAIVVSVDYRLAPEH----------RLP-----------------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLI 165 (229)
Q Consensus 113 ~~g~~vv~~dyr~~~~~----------~~~-----------------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~ 165 (229)
+.||+|+++|....++. +.. ...-|...+++||..+. .+|++||+++
T Consensus 158 k~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slp------eVD~~RIG~~ 231 (390)
T PF12715_consen 158 KRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLP------EVDPDRIGCM 231 (390)
T ss_dssp TTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-T------TEEEEEEEEE
T ss_pred hCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCc------ccCccceEEE
Confidence 57999999997754221 110 01245666888888764 6899999999
Q ss_pred ecchhHHHHHHHHHHhhhhcCCCCCcceeEEEecccc
Q 040311 166 GSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLLFPFF 202 (229)
Q Consensus 166 G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il~P~~ 202 (229)
|+|+||..++.++.-... |++.+.+.++
T Consensus 232 GfSmGg~~a~~LaALDdR---------Ika~v~~~~l 259 (390)
T PF12715_consen 232 GFSMGGYRAWWLAALDDR---------IKATVANGYL 259 (390)
T ss_dssp EEGGGHHHHHHHHHH-TT-----------EEEEES-B
T ss_pred eecccHHHHHHHHHcchh---------hHhHhhhhhh
Confidence 999999999999987655 8887773343
No 50
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.16 E-value=1.6e-10 Score=97.14 Aligned_cols=110 Identities=20% Similarity=0.204 Sum_probs=80.3
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
+.+.-+|++||-|-.. ..+-.....++. ...|.++|.-+.+....|..-.|...+..|..+..++|-. .-.-
T Consensus 88 ~~~~plVliHGyGAg~-----g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~-~~~L 159 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGL-----GLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRK-KMGL 159 (365)
T ss_pred cCCCcEEEEeccchhH-----HHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHH-HcCC
Confidence 4566799999943221 224455666664 7889999988776666665555555666677777766621 2344
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
++..|+|||+||.+|..+|+++|+ +|+-+|| +||--..
T Consensus 160 ~KmilvGHSfGGYLaa~YAlKyPe--------rV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 160 EKMILVGHSFGGYLAAKYALKYPE--------RVEKLILVSPWGFPE 198 (365)
T ss_pred cceeEeeccchHHHHHHHHHhChH--------hhceEEEeccccccc
Confidence 599999999999999999999999 7999999 9996544
No 51
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.14 E-value=5.4e-10 Score=89.60 Aligned_cols=102 Identities=26% Similarity=0.272 Sum_probs=67.4
Q ss_pred cEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCc--hHHHHHHHHHHHHHhcchhhhcCCCCC
Q 040311 83 PLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPA--AYDDAMDALHWIKNTQDDWLMKHADFD 160 (229)
Q Consensus 83 pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~--~~~D~~~a~~~l~~~~~~~~~~~~d~~ 160 (229)
|+||++||.+. +.. .|......++ .|+.|+.+|+++.+....+. ...+....++++.....+ ..+.+
T Consensus 2 ~~vv~~hG~~~---~~~--~~~~~~~~L~--~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLG---SGA--DWQALIELLG--PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLD----QLGIE 70 (251)
T ss_pred CEEEEEcCCCC---chh--hHHHHHHHhc--ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHH----HcCCC
Confidence 68999999432 222 2566666665 58999999999765443321 123333333331111111 22447
Q ss_pred cEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 161 NCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
++.|+|||+||.+|+.++.++++ .++++++ ++...
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~--------~v~~lil~~~~~~ 106 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPE--------RVQGLILESGSPG 106 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCch--------heeeeEEecCCCC
Confidence 89999999999999999999877 6889999 77644
No 52
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.13 E-value=2.1e-09 Score=90.18 Aligned_cols=98 Identities=21% Similarity=0.168 Sum_probs=68.4
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC----------chHHHHHHHHHHHHHhcch
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP----------AAYDDAMDALHWIKNTQDD 151 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~----------~~~~D~~~a~~~l~~~~~~ 151 (229)
.|.||++||.+.. .. .+......++. .+.|+++|+++.+....+ ..++|....+.-+.+..
T Consensus 29 ~~~vlllHG~~~~---~~--~w~~~~~~L~~--~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-- 99 (294)
T PLN02824 29 GPALVLVHGFGGN---AD--HWRKNTPVLAK--SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-- 99 (294)
T ss_pred CCeEEEECCCCCC---hh--HHHHHHHHHHh--CCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh--
Confidence 3689999995432 22 25666677753 369999999987654432 23445444444444332
Q ss_pred hhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 152 WLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 152 ~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+ .+++.|+|||+||.+++.++.++++ +|+++|+ +|..
T Consensus 100 ----~--~~~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lili~~~~ 137 (294)
T PLN02824 100 ----V--GDPAFVICNSVGGVVGLQAAVDAPE--------LVRGVMLINISL 137 (294)
T ss_pred ----c--CCCeEEEEeCHHHHHHHHHHHhChh--------heeEEEEECCCc
Confidence 2 2689999999999999999999888 7999999 7654
No 53
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.13 E-value=1.3e-09 Score=89.72 Aligned_cols=101 Identities=22% Similarity=0.216 Sum_probs=67.7
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC------chHHHHHHHHHHHHHhcchhhh
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP------AAYDDAMDALHWIKNTQDDWLM 154 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~------~~~~D~~~a~~~l~~~~~~~~~ 154 (229)
+.+.||++||++.. ... +......++.+.|+.|+.+|+++.+....+ ..+++....+..+.+..
T Consensus 24 ~~~~vl~~hG~~g~---~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 93 (288)
T TIGR01250 24 EKIKLLLLHGGPGM---SHE--YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL----- 93 (288)
T ss_pred CCCeEEEEcCCCCc---cHH--HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-----
Confidence 35789999996321 111 334455555556999999999986544332 12344444444444432
Q ss_pred cCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 155 KHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 155 ~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+.++++|+|||+||.+++.++...++ .++++++ ++..
T Consensus 94 ---~~~~~~liG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~ 131 (288)
T TIGR01250 94 ---GLDKFYLLGHSWGGMLAQEYALKYGQ--------HLKGLIISSMLD 131 (288)
T ss_pred ---CCCcEEEEEeehHHHHHHHHHHhCcc--------ccceeeEecccc
Confidence 33579999999999999999998876 6889888 7654
No 54
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.12 E-value=3.4e-10 Score=91.91 Aligned_cols=131 Identities=26% Similarity=0.276 Sum_probs=94.5
Q ss_pred CCceEEeeEEEcCCCC--EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecC
Q 040311 47 DAVVLSKDVTVNQSKN--TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYR 124 (229)
Q Consensus 47 ~~~~~~~~v~~~~~~~--~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr 124 (229)
...++.-++++.+-++ +...+.+|+..+ ++.|+||.+||-+-..|.. +.++ .++ ..|+.|+.+|.|
T Consensus 51 ~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~-----~~~P~vV~fhGY~g~~g~~-----~~~l-~wa-~~Gyavf~MdvR 118 (321)
T COG3458 51 LPRVEVYDVTFTGYGGARIKGWLVLPRHEK-----GKLPAVVQFHGYGGRGGEW-----HDML-HWA-VAGYAVFVMDVR 118 (321)
T ss_pred CCceEEEEEEEeccCCceEEEEEEeecccC-----CccceEEEEeeccCCCCCc-----cccc-ccc-ccceeEEEEecc
Confidence 4568899999998876 555677788654 7899999999922111111 1221 222 469999999999
Q ss_pred CCC----------CC-CCC-----------------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHH
Q 040311 125 LAP----------EH-RLP-----------------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYY 176 (229)
Q Consensus 125 ~~~----------~~-~~~-----------------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~ 176 (229)
+-. .. ..+ ..+.|+..+++-+.+.. .+|.+||++.|.|.||+|++.
T Consensus 119 GQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~------~vde~Ri~v~G~SqGGglala 192 (321)
T COG3458 119 GQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLD------EVDEERIGVTGGSQGGGLALA 192 (321)
T ss_pred cCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccC------ccchhheEEeccccCchhhhh
Confidence 631 11 111 23578888888877653 579999999999999999999
Q ss_pred HHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 177 AGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 177 ~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
++.-.+. |+++++ .|+++.
T Consensus 193 aaal~~r---------ik~~~~~~Pfl~d 212 (321)
T COG3458 193 AAALDPR---------IKAVVADYPFLSD 212 (321)
T ss_pred hhhcChh---------hhccccccccccc
Confidence 8876654 999999 999863
No 55
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.09 E-value=1.6e-09 Score=90.40 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=67.6
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC----CchHHHHHHH-HHHHHHhcchhhh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL----PAAYDDAMDA-LHWIKNTQDDWLM 154 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~----~~~~~D~~~a-~~~l~~~~~~~~~ 154 (229)
+..|.|||+||.+.. .. .|..+...+. +.||.|+++|+++...... ...+++.... .+++.+.
T Consensus 16 ~~~p~vvliHG~~~~---~~--~w~~~~~~L~-~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l------ 83 (273)
T PLN02211 16 RQPPHFVLIHGISGG---SW--CWYKIRCLME-NSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSL------ 83 (273)
T ss_pred CCCCeEEEECCCCCC---cC--cHHHHHHHHH-hCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhc------
Confidence 456899999995432 22 2555666554 4599999999998654321 1234443333 3333322
Q ss_pred cCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 155 KHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 155 ~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
. ..++++|+|||+||.++..++.++++ .|+++|+ +++.
T Consensus 84 -~-~~~~v~lvGhS~GG~v~~~~a~~~p~--------~v~~lv~~~~~~ 122 (273)
T PLN02211 84 -P-ENEKVILVGHSAGGLSVTQAIHRFPK--------KICLAVYVAATM 122 (273)
T ss_pred -C-CCCCEEEEEECchHHHHHHHHHhChh--------heeEEEEecccc
Confidence 1 12689999999999999999988776 6889999 7654
No 56
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.09 E-value=3.4e-09 Score=86.60 Aligned_cols=123 Identities=20% Similarity=0.217 Sum_probs=88.5
Q ss_pred eEEEcCCC-CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCC--CCC--
Q 040311 54 DVTVNQSK-NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRL--APE-- 128 (229)
Q Consensus 54 ~v~~~~~~-~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~--~~~-- 128 (229)
++.+...+ .+...+..|... .+.|+||.+|+ ..|-... .+..+++++. .||.|+++|.-. ...
T Consensus 4 ~v~~~~~~~~~~~~~a~P~~~------~~~P~VIv~he---i~Gl~~~--i~~~a~rlA~-~Gy~v~~Pdl~~~~~~~~~ 71 (236)
T COG0412 4 DVTIPAPDGELPAYLARPAGA------GGFPGVIVLHE---IFGLNPH--IRDVARRLAK-AGYVVLAPDLYGRQGDPTD 71 (236)
T ss_pred ceEeeCCCceEeEEEecCCcC------CCCCEEEEEec---ccCCchH--HHHHHHHHHh-CCcEEEechhhccCCCCCc
Confidence 44555444 466677778765 34499999999 2222222 5678888886 499999999332 110
Q ss_pred ---------------CCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcce
Q 040311 129 ---------------HRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKI 193 (229)
Q Consensus 129 ---------------~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v 193 (229)
........|+.++++||.++. .++.++|+++|+|+||.+++.++.+.++ +
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~------~~~~~~ig~~GfC~GG~~a~~~a~~~~~---------v 136 (236)
T COG0412 72 IEDEPAELETGLVERVDPAEVLADIDAALDYLARQP------QVDPKRIGVVGFCMGGGLALLAATRAPE---------V 136 (236)
T ss_pred ccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC------CCCCceEEEEEEcccHHHHHHhhcccCC---------c
Confidence 011245689999999999874 4788999999999999999999987765 8
Q ss_pred eEEEe-ccccC
Q 040311 194 KGLLL-FPFFG 203 (229)
Q Consensus 194 ~g~il-~P~~~ 203 (229)
++.+. +|..-
T Consensus 137 ~a~v~fyg~~~ 147 (236)
T COG0412 137 KAAVAFYGGLI 147 (236)
T ss_pred cEEEEecCCCC
Confidence 88888 77754
No 57
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.08 E-value=1.9e-09 Score=89.49 Aligned_cols=100 Identities=20% Similarity=0.127 Sum_probs=62.3
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCc-----hHHHHHHHHHHHHHhcchhhhcC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPA-----AYDDAMDALHWIKNTQDDWLMKH 156 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~-----~~~D~~~a~~~l~~~~~~~~~~~ 156 (229)
.|.||++||.+..... ...+...+..++ +.|+.|+++|+|+.+....+. ....+....+ +.+ .
T Consensus 30 ~~~ivllHG~~~~~~~--~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~-~l~--------~ 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAGG--WSNYYRNIGPFV-DAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKG-LMD--------A 97 (282)
T ss_pred CCeEEEECCCCCchhh--HHHHHHHHHHHH-hCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHH-HHH--------H
Confidence 3679999995432111 101112233443 458999999999876543321 1111111122 222 2
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
.+.++++++|||+||.+++.++.++++ +++++|+ +|.
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~ 135 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPD--------RIGKLILMGPG 135 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChH--------hhceEEEECCC
Confidence 345799999999999999999999887 6889998 764
No 58
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.07 E-value=1.4e-09 Score=89.45 Aligned_cols=111 Identities=22% Similarity=0.235 Sum_probs=77.4
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEe-cCCC--C----CC----C
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVD-YRLA--P----EH----R 130 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~d-yr~~--~----~~----~ 130 (229)
...+++|.|.... ++.|+||++||++.. ........-..+++++.|+.|+.+| |... + .. .
T Consensus 46 ~r~y~l~vP~g~~-----~~apLvv~LHG~~~s---gag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~ 117 (312)
T COG3509 46 KRSYRLYVPPGLP-----SGAPLVVVLHGSGGS---GAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPAD 117 (312)
T ss_pred ccceEEEcCCCCC-----CCCCEEEEEecCCCC---hHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccc
Confidence 4778899999875 556999999996432 3322223345778888999999995 4321 1 11 1
Q ss_pred CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 131 LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 131 ~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
....++|+-...+-+.+...++ ++|+.||++.|.|.||.|+..++..+++
T Consensus 118 ~~~g~ddVgflr~lva~l~~~~---gidp~RVyvtGlS~GG~Ma~~lac~~p~ 167 (312)
T COG3509 118 RRRGVDDVGFLRALVAKLVNEY---GIDPARVYVTGLSNGGRMANRLACEYPD 167 (312)
T ss_pred ccCCccHHHHHHHHHHHHHHhc---CcCcceEEEEeeCcHHHHHHHHHhcCcc
Confidence 1233555555444444444443 8999999999999999999999999888
No 59
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.06 E-value=1.4e-09 Score=90.50 Aligned_cols=99 Identities=20% Similarity=0.201 Sum_probs=66.4
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCc---hHHHHHHHHHHHHHhcchhhhcCCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPA---AYDDAMDALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~---~~~D~~~a~~~l~~~~~~~~~~~~d 158 (229)
.+.|||+||.+.. .. .|...+..+. .++.|+++|+++.+....+. .+++....+.-+.+.. +
T Consensus 25 ~~plvllHG~~~~---~~--~w~~~~~~L~--~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l--------~ 89 (276)
T TIGR02240 25 LTPLLIFNGIGAN---LE--LVFPFIEALD--PDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYL--------D 89 (276)
T ss_pred CCcEEEEeCCCcc---hH--HHHHHHHHhc--cCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh--------C
Confidence 3579999994322 22 2555666553 36999999999876554332 2333333333223221 3
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.+++.|+|||+||.+|+.+|.+.++ .|+++|+ ++...
T Consensus 90 ~~~~~LvG~S~GG~va~~~a~~~p~--------~v~~lvl~~~~~~ 127 (276)
T TIGR02240 90 YGQVNAIGVSWGGALAQQFAHDYPE--------RCKKLILAATAAG 127 (276)
T ss_pred cCceEEEEECHHHHHHHHHHHHCHH--------HhhheEEeccCCc
Confidence 3689999999999999999999888 7999999 76653
No 60
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.04 E-value=1.3e-09 Score=94.48 Aligned_cols=129 Identities=13% Similarity=0.076 Sum_probs=81.7
Q ss_pred ceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC
Q 040311 49 VVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE 128 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~ 128 (229)
.++..++.+.+ ..+...+.+|+.. ++.|+||++-|- .+-..+ +.......+...|++++.+|..+-+.
T Consensus 164 ~i~~v~iP~eg-~~I~g~LhlP~~~------~p~P~VIv~gGl----Ds~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~ 231 (411)
T PF06500_consen 164 PIEEVEIPFEG-KTIPGYLHLPSGE------KPYPTVIVCGGL----DSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGE 231 (411)
T ss_dssp EEEEEEEEETT-CEEEEEEEESSSS------S-EEEEEEE--T----TS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGG
T ss_pred CcEEEEEeeCC-cEEEEEEEcCCCC------CCCCEEEEeCCc----chhHHH-HHHHHHHHHHhCCCEEEEEccCCCcc
Confidence 46677778866 6678878888843 788998888661 122222 33344444456799999999987543
Q ss_pred C---CCCc-hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 129 H---RLPA-AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 129 ~---~~~~-~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
. ++.. .-.-..++++|+.+.. .+|.+||+++|.|+||+.|..+|.-..+ +|+|+|. +|.++
T Consensus 232 s~~~~l~~D~~~l~~aVLd~L~~~p------~VD~~RV~~~G~SfGGy~AvRlA~le~~--------RlkavV~~Ga~vh 297 (411)
T PF06500_consen 232 SPKWPLTQDSSRLHQAVLDYLASRP------WVDHTRVGAWGFSFGGYYAVRLAALEDP--------RLKAVVALGAPVH 297 (411)
T ss_dssp GTTT-S-S-CCHHHHHHHHHHHHST------TEEEEEEEEEEETHHHHHHHHHHHHTTT--------T-SEEEEES---S
T ss_pred cccCCCCcCHHHHHHHHHHHHhcCC------ccChhheEEEEeccchHHHHHHHHhccc--------ceeeEeeeCchHh
Confidence 2 2211 1122457788888764 6899999999999999999999876555 6999999 88754
No 61
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.04 E-value=7.4e-09 Score=86.70 Aligned_cols=112 Identities=22% Similarity=0.220 Sum_probs=76.1
Q ss_pred EeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC-
Q 040311 52 SKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR- 130 (229)
Q Consensus 52 ~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~- 130 (229)
.+-+...+++-..+++..++.. .+.|.||.+|| ..|+..+. |-..+.+.+.+.|+.||.+++|+|....
T Consensus 51 re~v~~pdg~~~~ldw~~~p~~------~~~P~vVl~HG---L~G~s~s~-y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n 120 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPRA------AKKPLVVLFHG---LEGSSNSP-YARGLMRALSRRGWLVVVFHFRGCSGEAN 120 (345)
T ss_pred eEEEEcCCCCEEEEeeccCccc------cCCceEEEEec---cCCCCcCH-HHHHHHHHHHhcCCeEEEEecccccCCcc
Confidence 4455666666666766665332 56799999999 33444443 4443444445679999999999875422
Q ss_pred ------CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHH-HHHHHHHHh
Q 040311 131 ------LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGN-IAYYAGLRA 181 (229)
Q Consensus 131 ------~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~-la~~~a~~~ 181 (229)
.....+|+...++|+++.. -+.++..+|.|+||+ ++..++.+.
T Consensus 121 ~~p~~yh~G~t~D~~~~l~~l~~~~--------~~r~~~avG~SLGgnmLa~ylgeeg 170 (345)
T COG0429 121 TSPRLYHSGETEDIRFFLDWLKARF--------PPRPLYAVGFSLGGNMLANYLGEEG 170 (345)
T ss_pred cCcceecccchhHHHHHHHHHHHhC--------CCCceEEEEecccHHHHHHHHHhhc
Confidence 2234599999999998864 347899999999995 555555443
No 62
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.04 E-value=3.3e-09 Score=87.54 Aligned_cols=99 Identities=20% Similarity=0.161 Sum_probs=66.6
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC----chHHHHHHHHHHHHHhcchhhhcC
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP----AAYDDAMDALHWIKNTQDDWLMKH 156 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~ 156 (229)
..|+||++||.+.. .. .|......++ .++.|+.+|+++.+....+ ..+.+....+..+.+.. +
T Consensus 27 ~~~~vv~~hG~~~~---~~--~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~------~ 93 (278)
T TIGR03056 27 AGPLLLLLHGTGAS---TH--SWRDLMPPLA--RSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE------G 93 (278)
T ss_pred CCCeEEEEcCCCCC---HH--HHHHHHHHHh--hCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc------C
Confidence 35789999995322 22 2555666664 3699999999986543322 23455444444444432 2
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
.++++|+|||+||.+++.++.+.++ +++++++ ++..
T Consensus 94 --~~~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~v~~~~~~ 130 (278)
T TIGR03056 94 --LSPDGVIGHSAGAAIALRLALDGPV--------TPRMVVGINAAL 130 (278)
T ss_pred --CCCceEEEECccHHHHHHHHHhCCc--------ccceEEEEcCcc
Confidence 2578999999999999999988776 5778887 6543
No 63
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.03 E-value=9.9e-10 Score=88.30 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=66.2
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC---chHHHHHHHHHHHHHhcchhhhcCC
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP---AAYDDAMDALHWIKNTQDDWLMKHA 157 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~---~~~~D~~~a~~~l~~~~~~~~~~~~ 157 (229)
.+|+||++||.|-. .. .+..+...+. .|+.|+++|+++.+....+ ..+.+....+..+.+..
T Consensus 12 ~~~~li~~hg~~~~---~~--~~~~~~~~l~--~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~-------- 76 (251)
T TIGR02427 12 GAPVLVFINSLGTD---LR--MWDPVLPALT--PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL-------- 76 (251)
T ss_pred CCCeEEEEcCcccc---hh--hHHHHHHHhh--cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--------
Confidence 56899999995432 11 2455555553 4899999999987554322 13444444444333332
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+.+++.++|||+||.+++.+|.+.++ .++++++ ++.
T Consensus 77 ~~~~v~liG~S~Gg~~a~~~a~~~p~--------~v~~li~~~~~ 113 (251)
T TIGR02427 77 GIERAVFCGLSLGGLIAQGLAARRPD--------RVRALVLSNTA 113 (251)
T ss_pred CCCceEEEEeCchHHHHHHHHHHCHH--------HhHHHhhccCc
Confidence 33689999999999999999998876 5888888 654
No 64
>PRK06489 hypothetical protein; Provisional
Probab=99.03 E-value=3.3e-09 Score=91.89 Aligned_cols=138 Identities=15% Similarity=0.192 Sum_probs=80.5
Q ss_pred CCCCCCceEEeeEEEcCCCCEE-EEEEEeCCCCCC--CCCCCccEEEEEcCCcccccCCCCcchH--HHHHHHH------
Q 040311 43 PVNDDAVVLSKDVTVNQSKNTW-VRIFVPRQALDS--PSSTKLPLIVDFHGGGFIFFSAASSLSH--EFCSNVA------ 111 (229)
Q Consensus 43 p~~~~~~~~~~~v~~~~~~~~~-~~i~~P~~~~~~--~~~~~~pviv~iHGGg~~~g~~~~~~~~--~~~~~~~------ 111 (229)
|..+++....+++.+.++..+. +++++-...... ...+..|.||++||++.. ... +. .+...+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~---~~~--~~~~~~~~~l~~~~~~l 101 (360)
T PRK06489 27 PAPQEGDWVARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGS---GKS--FLSPTFAGELFGPGQPL 101 (360)
T ss_pred CCCccCceeccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCc---hhh--hccchhHHHhcCCCCcc
Confidence 3334667788888888754332 344443322100 000115789999995432 111 11 2222221
Q ss_pred hhCCcEEEEEecCCCCCCCCC----------chHHHHHH-HHHHHHHhcchhhhcCCCCCcE-EEEecchhHHHHHHHHH
Q 040311 112 VELPAIVVSVDYRLAPEHRLP----------AAYDDAMD-ALHWIKNTQDDWLMKHADFDNC-FLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 112 ~~~g~~vv~~dyr~~~~~~~~----------~~~~D~~~-a~~~l~~~~~~~~~~~~d~~ri-~l~G~S~GG~la~~~a~ 179 (229)
...++.|+++|+++.+....+ -.+++... .++++.+.. ++ +++ +|+|||+||.+|+.++.
T Consensus 102 ~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~l------gi--~~~~~lvG~SmGG~vAl~~A~ 173 (360)
T PRK06489 102 DASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGL------GV--KHLRLILGTSMGGMHAWMWGE 173 (360)
T ss_pred cccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhc------CC--CceeEEEEECHHHHHHHHHHH
Confidence 134799999999987543322 12444443 233344432 22 466 48999999999999999
Q ss_pred HhhhhcCCCCCcceeEEEe-ccc
Q 040311 180 RATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 180 ~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
++++ +|+++|+ ++.
T Consensus 174 ~~P~--------~V~~LVLi~s~ 188 (360)
T PRK06489 174 KYPD--------FMDALMPMASQ 188 (360)
T ss_pred hCch--------hhheeeeeccC
Confidence 9988 7999998 654
No 65
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=3.1e-09 Score=99.86 Aligned_cols=138 Identities=19% Similarity=0.120 Sum_probs=100.5
Q ss_pred eEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC
Q 040311 50 VLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH 129 (229)
Q Consensus 50 ~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~ 129 (229)
.+.+++.+ ++-...+.+.+|++.. +.++.|++|.+|||-.. ..........+...++...|++|+.+|+|+++..
T Consensus 498 ~~~~~i~~-~~~~~~~~~~lP~~~~---~~~kyPllv~~yGGP~s-q~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~ 572 (755)
T KOG2100|consen 498 VEFGKIEI-DGITANAILILPPNFD---PSKKYPLLVVVYGGPGS-QSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGY 572 (755)
T ss_pred ceeEEEEe-ccEEEEEEEecCCCCC---CCCCCCEEEEecCCCCc-ceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCc
Confidence 44555555 3334556778898776 45789999999998541 1111111233555567788999999999987654
Q ss_pred CCC-----------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 130 RLP-----------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 130 ~~~-----------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
... ....|+..+++++.++. .+|.+||+|+|.|.||.+++.++...+. .-+++.++
T Consensus 573 G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~------~iD~~ri~i~GwSyGGy~t~~~l~~~~~-------~~fkcgva 639 (755)
T KOG2100|consen 573 GWDFRSALPRNLGDVEVKDQIEAVKKVLKLP------FIDRSRVAIWGWSYGGYLTLKLLESDPG-------DVFKCGVA 639 (755)
T ss_pred chhHHHHhhhhcCCcchHHHHHHHHHHHhcc------cccHHHeEEeccChHHHHHHHHhhhCcC-------ceEEEEEE
Confidence 322 35789999999999875 5899999999999999999999988763 14566677
Q ss_pred -ccccCCC
Q 040311 199 -FPFFGAI 205 (229)
Q Consensus 199 -~P~~~~~ 205 (229)
+|+++..
T Consensus 640 vaPVtd~~ 647 (755)
T KOG2100|consen 640 VAPVTDWL 647 (755)
T ss_pred ecceeeee
Confidence 9999876
No 66
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.02 E-value=2.5e-09 Score=86.68 Aligned_cols=101 Identities=17% Similarity=0.159 Sum_probs=66.3
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC----chHHHHHHHHHHHHHhcchhhhc
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP----AAYDDAMDALHWIKNTQDDWLMK 155 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~ 155 (229)
.+.|+||++||.+.. .. .+......+. .++.|+++|+++.+....+ -.++|....+..+.+.
T Consensus 11 ~~~~~iv~lhG~~~~---~~--~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~------- 76 (257)
T TIGR03611 11 ADAPVVVLSSGLGGS---GS--YWAPQLDVLT--QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDA------- 76 (257)
T ss_pred CCCCEEEEEcCCCcc---hh--HHHHHHHHHH--hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHH-------
Confidence 456899999995432 22 2444444443 4799999999986543321 1233333333222222
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.+..+++|+|||+||.+|+.++.+.++ .++++|+ +++..
T Consensus 77 -~~~~~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~ 116 (257)
T TIGR03611 77 -LNIERFHFVGHALGGLIGLQLALRYPE--------RLLSLVLINAWSR 116 (257)
T ss_pred -hCCCcEEEEEechhHHHHHHHHHHChH--------HhHHheeecCCCC
Confidence 234689999999999999999998876 6889998 77654
No 67
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.01 E-value=2.8e-09 Score=91.47 Aligned_cols=133 Identities=17% Similarity=0.109 Sum_probs=77.1
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCC-----------------cch----HHHHHHHHhhCCcEEEEE
Q 040311 63 TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAAS-----------------SLS----HEFCSNVAVELPAIVVSV 121 (229)
Q Consensus 63 ~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~-----------------~~~----~~~~~~~~~~~g~~vv~~ 121 (229)
+.+..|.|+ .++.+|+++||-|...+.... ..| ..++..++ +.|+.|+++
T Consensus 10 l~~~~~~~~--------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~-~~G~~V~~~ 80 (332)
T TIGR01607 10 LKTYSWIVK--------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFN-KNGYSVYGL 80 (332)
T ss_pred EEEeeeecc--------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHH-HCCCcEEEe
Confidence 555666664 356799999994443321100 012 34566665 469999999
Q ss_pred ecCCCCCCC-----------CCchHHHHHHHHHHHHHhcc----------hhhhcCCC--CCcEEEEecchhHHHHHHHH
Q 040311 122 DYRLAPEHR-----------LPAAYDDAMDALHWIKNTQD----------DWLMKHAD--FDNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 122 dyr~~~~~~-----------~~~~~~D~~~a~~~l~~~~~----------~~~~~~~d--~~ri~l~G~S~GG~la~~~a 178 (229)
|.|+.+... +...++|+...++.+.+... ++...... ...++|+||||||.+++.++
T Consensus 81 D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 81 DLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred cccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 999764322 12234566666665543200 00000001 24699999999999999988
Q ss_pred HHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 179 LRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 179 ~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
....+...-.....++|+|+ +|++..
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMISI 187 (332)
T ss_pred HHhccccccccccccceEEEeccceEE
Confidence 76643100011235899998 888643
No 68
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.01 E-value=5.6e-09 Score=85.37 Aligned_cols=92 Identities=22% Similarity=0.166 Sum_probs=63.3
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC------chHHHHHHHHHHHHHhcchhh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP------AAYDDAMDALHWIKNTQDDWL 153 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~------~~~~D~~~a~~~l~~~~~~~~ 153 (229)
...|.||++||.+- +.. .+...+..+. .++.|+.+|+|+.+....+ ...+|+.+.++.+
T Consensus 14 ~~~~~iv~lhG~~~---~~~--~~~~~~~~l~--~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l-------- 78 (255)
T PRK10673 14 HNNSPIVLVHGLFG---SLD--NLGVLARDLV--NDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL-------- 78 (255)
T ss_pred CCCCCEEEECCCCC---chh--HHHHHHHHHh--hCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc--------
Confidence 45688999999432 222 2555666664 3799999999986544332 2223333333321
Q ss_pred hcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 154 MKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 154 ~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
+.+++.|+|||+||.+|+.++.+.++ .|+++++
T Consensus 79 ----~~~~~~lvGhS~Gg~va~~~a~~~~~--------~v~~lvl 111 (255)
T PRK10673 79 ----QIEKATFIGHSMGGKAVMALTALAPD--------RIDKLVA 111 (255)
T ss_pred ----CCCceEEEEECHHHHHHHHHHHhCHh--------hcceEEE
Confidence 23579999999999999999998877 6889888
No 69
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.00 E-value=9e-09 Score=90.72 Aligned_cols=105 Identities=19% Similarity=0.260 Sum_probs=67.8
Q ss_pred CCccEEEEEcCCcccccCCCCcchHH-HHHHHHhh-CCcEEEEEecCCCCCCCCCch-------HHHHHHHHHHHHHhcc
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHE-FCSNVAVE-LPAIVVSVDYRLAPEHRLPAA-------YDDAMDALHWIKNTQD 150 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~-~~~~~~~~-~g~~vv~~dyr~~~~~~~~~~-------~~D~~~a~~~l~~~~~ 150 (229)
...|++|++||.+- +.....+.. +...+... ..++|+++|++......++.. -.++...++++.+..
T Consensus 39 ~~~ptvIlIHG~~~---s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~- 114 (442)
T TIGR03230 39 HETKTFIVIHGWTV---TGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEF- 114 (442)
T ss_pred CCCCeEEEECCCCc---CCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhh-
Confidence 45789999999432 111111222 34444322 369999999997655444422 134444555554432
Q ss_pred hhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 151 DWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 151 ~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+++.+++.|+|||+||++|..++.+.+. +|..+++ .|.
T Consensus 115 -----gl~l~~VhLIGHSLGAhIAg~ag~~~p~--------rV~rItgLDPA 153 (442)
T TIGR03230 115 -----NYPWDNVHLLGYSLGAHVAGIAGSLTKH--------KVNRITGLDPA 153 (442)
T ss_pred -----CCCCCcEEEEEECHHHHHHHHHHHhCCc--------ceeEEEEEcCC
Confidence 5677899999999999999999987665 5788887 553
No 70
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.00 E-value=1.7e-08 Score=84.77 Aligned_cols=98 Identities=19% Similarity=0.239 Sum_probs=70.3
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC----chHHHHHHHHHHHHHhcchhhhcCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP----AAYDDAMDALHWIKNTQDDWLMKHA 157 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~~ 157 (229)
.|.|||+||.+. ....|......+. .++.|+++|+++.+....+ ..+++....+..+.+..
T Consensus 34 ~~~iv~lHG~~~-----~~~~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-------- 98 (286)
T PRK03204 34 GPPILLCHGNPT-----WSFLYRDIIVALR--DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-------- 98 (286)
T ss_pred CCEEEEECCCCc-----cHHHHHHHHHHHh--CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh--------
Confidence 478999999541 1122444555553 3699999999986544322 34577777777776653
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+.+++.++|||+||.++..++..+++ +|+++|+ ++..
T Consensus 99 ~~~~~~lvG~S~Gg~va~~~a~~~p~--------~v~~lvl~~~~~ 136 (286)
T PRK03204 99 GLDRYLSMGQDWGGPISMAVAVERAD--------RVRGVVLGNTWF 136 (286)
T ss_pred CCCCEEEEEECccHHHHHHHHHhChh--------heeEEEEECccc
Confidence 33689999999999999999998887 6999988 6653
No 71
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.99 E-value=3.6e-09 Score=85.90 Aligned_cols=100 Identities=20% Similarity=0.125 Sum_probs=64.6
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCc
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDN 161 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~r 161 (229)
.|.||++||.+.. . ..|......+ .++.|+++|+++.+....+.. .+.....+++.+..++ .+.++
T Consensus 2 ~p~vvllHG~~~~---~--~~w~~~~~~l---~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~l~~~l~~-----~~~~~ 67 (242)
T PRK11126 2 LPWLVFLHGLLGS---G--QDWQPVGEAL---PDYPRLYIDLPGHGGSAAISV-DGFADVSRLLSQTLQS-----YNILP 67 (242)
T ss_pred CCEEEEECCCCCC---h--HHHHHHHHHc---CCCCEEEecCCCCCCCCCccc-cCHHHHHHHHHHHHHH-----cCCCC
Confidence 3679999995432 2 1255555544 379999999998765433221 1233333333333222 13469
Q ss_pred EEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 162 CFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 162 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+.++|||+||.+|+.++.++++ ..|+++++ ++..
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~-------~~v~~lvl~~~~~ 102 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLA-------GGLCGLIVEGGNP 102 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCc-------ccccEEEEeCCCC
Confidence 9999999999999999998754 14889888 6554
No 72
>PLN02965 Probable pheophorbidase
Probab=98.99 E-value=6.1e-09 Score=85.75 Aligned_cols=97 Identities=20% Similarity=0.094 Sum_probs=65.1
Q ss_pred EEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC----chHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 84 LIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP----AAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 84 viv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
.||++||.+. +.. .|......+. +.++.|+++|+++.+....+ ..+++....+.-+.+.. +..
T Consensus 5 ~vvllHG~~~---~~~--~w~~~~~~L~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l------~~~- 71 (255)
T PLN02965 5 HFVFVHGASH---GAW--CWYKLATLLD-AAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL------PPD- 71 (255)
T ss_pred EEEEECCCCC---CcC--cHHHHHHHHh-hCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc------CCC-
Confidence 4999999642 222 2555666664 45899999999987654322 12344333333333322 211
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
.++.|+|||+||.+++.++.++++ .|+++|+ ++.
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~~~p~--------~v~~lvl~~~~ 106 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALCKFTD--------KISMAIYVAAA 106 (255)
T ss_pred CCEEEEecCcchHHHHHHHHhCch--------heeEEEEEccc
Confidence 489999999999999999998887 6899998 654
No 73
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.99 E-value=1.1e-08 Score=79.25 Aligned_cols=116 Identities=18% Similarity=0.273 Sum_probs=77.9
Q ss_pred eEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC--CCCC
Q 040311 54 DVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP--EHRL 131 (229)
Q Consensus 54 ~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~--~~~~ 131 (229)
++.+++-.+..--.|.|.+. ..+|+.|.+|---...|+.... ....+.+.+.+.|+.++.+|||+-+ +..|
T Consensus 6 ~v~i~Gp~G~le~~~~~~~~------~~~~iAli~HPHPl~gGtm~nk-vv~~la~~l~~~G~atlRfNfRgVG~S~G~f 78 (210)
T COG2945 6 TVIINGPAGRLEGRYEPAKT------PAAPIALICHPHPLFGGTMNNK-VVQTLARALVKRGFATLRFNFRGVGRSQGEF 78 (210)
T ss_pred cEEecCCcccceeccCCCCC------CCCceEEecCCCccccCccCCH-HHHHHHHHHHhCCceEEeecccccccccCcc
Confidence 44454433322224556543 5789999999733333333332 1223444556789999999999743 2333
Q ss_pred C---chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 132 P---AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 132 ~---~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
. ..++|+.++++|++.+.. +..-..|+|+|.|+.+++.+|++.++
T Consensus 79 D~GiGE~~Da~aaldW~~~~hp-------~s~~~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 79 DNGIGELEDAAAALDWLQARHP-------DSASCWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred cCCcchHHHHHHHHHHHHhhCC-------CchhhhhcccchHHHHHHHHHHhccc
Confidence 3 568999999999998753 33446899999999999999999876
No 74
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.99 E-value=6.5e-09 Score=89.73 Aligned_cols=122 Identities=14% Similarity=0.141 Sum_probs=81.2
Q ss_pred CCCCEEEEEEEeCCCCCCCCCCCccEEEEEcC---CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC---
Q 040311 59 QSKNTWVRIFVPRQALDSPSSTKLPLIVDFHG---GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP--- 132 (229)
Q Consensus 59 ~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHG---Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~--- 132 (229)
..+.+.+..|.|.... ..+.| |+++|| .+|..... ....++..++ +.|+.|+.+|++........
T Consensus 44 ~~~~~~l~~~~~~~~~----~~~~p-vl~v~~~~~~~~~~d~~---~~~~~~~~L~-~~G~~V~~~D~~g~g~s~~~~~~ 114 (350)
T TIGR01836 44 REDKVVLYRYTPVKDN----THKTP-LLIVYALVNRPYMLDLQ---EDRSLVRGLL-ERGQDVYLIDWGYPDRADRYLTL 114 (350)
T ss_pred EcCcEEEEEecCCCCc----CCCCc-EEEeccccccceeccCC---CCchHHHHHH-HCCCeEEEEeCCCCCHHHhcCCH
Confidence 3456777778775432 13334 888998 23322111 1245666665 56999999999875432211
Q ss_pred -chH-HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 133 -AAY-DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 133 -~~~-~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
... +|+.++++++.++. +.+++.++|||+||.+++.++...++ +++++++ +|.++..
T Consensus 115 ~d~~~~~~~~~v~~l~~~~--------~~~~i~lvGhS~GG~i~~~~~~~~~~--------~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 115 DDYINGYIDKCVDYICRTS--------KLDQISLLGICQGGTFSLCYAALYPD--------KIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHHHHHHHh--------CCCcccEEEECHHHHHHHHHHHhCch--------heeeEEEeccccccC
Confidence 122 34677888888764 23689999999999999999888766 6899999 7776643
No 75
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=5.8e-09 Score=93.38 Aligned_cols=130 Identities=17% Similarity=0.209 Sum_probs=96.2
Q ss_pred cCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcch-HH-HHHHHHhhCCcEEEEEecCCCCCCC--CC-
Q 040311 58 NQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLS-HE-FCSNVAVELPAIVVSVDYRLAPEHR--LP- 132 (229)
Q Consensus 58 ~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~-~~-~~~~~~~~~g~~vv~~dyr~~~~~~--~~- 132 (229)
+++..+..-+|.|.+.. ..+++|+++++-||-.+---...... .. ....++ ..||.|+.+|-|++.... |.
T Consensus 621 ~tg~~lYgmiyKPhn~~---pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~La-slGy~Vv~IDnRGS~hRGlkFE~ 696 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQ---PGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLA-SLGYVVVFIDNRGSAHRGLKFES 696 (867)
T ss_pred CCCcEEEEEEEccccCC---CCCCCceEEEEcCCCceEEeeccccceehhhhhhhh-hcceEEEEEcCCCccccchhhHH
Confidence 34445677799998875 66889999999998654222222111 11 233444 469999999999874322 21
Q ss_pred --------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 133 --------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 133 --------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
-.++|...+++||.++.. -+|.+||+|-|.|.||.|+++..+++++ -.+..|+ +|+++
T Consensus 697 ~ik~kmGqVE~eDQVeglq~Laeq~g-----fidmdrV~vhGWSYGGYLSlm~L~~~P~--------IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 697 HIKKKMGQVEVEDQVEGLQMLAEQTG-----FIDMDRVGVHGWSYGGYLSLMGLAQYPN--------IFRVAIAGAPVTD 763 (867)
T ss_pred HHhhccCeeeehhhHHHHHHHHHhcC-----cccchheeEeccccccHHHHHHhhcCcc--------eeeEEeccCccee
Confidence 346899999999999862 3799999999999999999999999998 5788888 99886
Q ss_pred C
Q 040311 204 A 204 (229)
Q Consensus 204 ~ 204 (229)
.
T Consensus 764 W 764 (867)
T KOG2281|consen 764 W 764 (867)
T ss_pred e
Confidence 4
No 76
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.97 E-value=2.8e-08 Score=88.89 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=64.9
Q ss_pred CccEEEEEcCCcccccCCCCcchHH-HHHHHHh--hCCcEEEEEecCCCCCCCCC----chHHHHHHHH-HHHHHhcchh
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHE-FCSNVAV--ELPAIVVSVDYRLAPEHRLP----AAYDDAMDAL-HWIKNTQDDW 152 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~-~~~~~~~--~~g~~vv~~dyr~~~~~~~~----~~~~D~~~a~-~~l~~~~~~~ 152 (229)
..|.||++||.+.. .. .|.. ....+.. +.++.|+++|+++.+....+ ..+++....+ +.+.+.
T Consensus 200 ~k~~VVLlHG~~~s---~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~---- 270 (481)
T PLN03087 200 AKEDVLFIHGFISS---SA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLER---- 270 (481)
T ss_pred CCCeEEEECCCCcc---HH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHH----
Confidence 35789999996432 11 1332 2233331 35899999999986543322 1234433333 233332
Q ss_pred hhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 153 LMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 153 ~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
.+.+++.++|||+||.+|+.++.++++ +|+++++ +|.
T Consensus 271 ----lg~~k~~LVGhSmGG~iAl~~A~~~Pe--------~V~~LVLi~~~ 308 (481)
T PLN03087 271 ----YKVKSFHIVAHSLGCILALALAVKHPG--------AVKSLTLLAPP 308 (481)
T ss_pred ----cCCCCEEEEEECHHHHHHHHHHHhChH--------hccEEEEECCC
Confidence 233689999999999999999999988 6999999 654
No 77
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.96 E-value=9.1e-10 Score=86.40 Aligned_cols=115 Identities=14% Similarity=0.148 Sum_probs=80.1
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecC--CC-----C-------C
Q 040311 63 TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYR--LA-----P-------E 128 (229)
Q Consensus 63 ~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr--~~-----~-------~ 128 (229)
+...+|+|..+. .+++.|+++|+-| .....+.+......+..|.+.|++||.+|-+ +. + +
T Consensus 28 Mtf~vylPp~a~---~~k~~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~G 101 (283)
T KOG3101|consen 28 MTFGVYLPPDAP---RGKRCPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQG 101 (283)
T ss_pred eEEEEecCCCcc---cCCcCceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCC
Confidence 778899998876 4466899999999 5555666656677888889999999999843 21 0 1
Q ss_pred CCC-----CchHHHHHHHHHHHHHhcchhhh---cCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 129 HRL-----PAAYDDAMDALHWIKNTQDDWLM---KHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 129 ~~~-----~~~~~D~~~a~~~l~~~~~~~~~---~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
+.| .+....-...++|+.+.+.+.+. ..+|+.++.|.||||||+-|+..+++.+.
T Consensus 102 AGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~ 164 (283)
T KOG3101|consen 102 AGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPS 164 (283)
T ss_pred ceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcc
Confidence 111 01122223445555555433322 24799999999999999999999998877
No 78
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.94 E-value=1.1e-08 Score=85.99 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=66.6
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCc---hHHHHHHHHHHHHHhcchhhhcCCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPA---AYDDAMDALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~---~~~D~~~a~~~l~~~~~~~~~~~~d 158 (229)
.|.||++||.+. +. ..+...+..++.. + .|+++|+++.+....+. .+++....+..+.+.. +
T Consensus 27 g~~vvllHG~~~---~~--~~w~~~~~~L~~~-~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l--------~ 91 (295)
T PRK03592 27 GDPIVFLHGNPT---SS--YLWRNIIPHLAGL-G-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL--------G 91 (295)
T ss_pred CCEEEEECCCCC---CH--HHHHHHHHHHhhC-C-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--------C
Confidence 368999999532 22 2255666666543 4 99999999876543322 2333333333333332 2
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
.+++.|+|||+||.+|+.++.++++ +|+++|+ ++..
T Consensus 92 ~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lil~~~~~ 128 (295)
T PRK03592 92 LDDVVLVGHDWGSALGFDWAARHPD--------RVRGIAFMEAIV 128 (295)
T ss_pred CCCeEEEEECHHHHHHHHHHHhChh--------heeEEEEECCCC
Confidence 3689999999999999999999988 7999999 7643
No 79
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.91 E-value=8.4e-09 Score=82.67 Aligned_cols=95 Identities=19% Similarity=0.098 Sum_probs=63.3
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCc
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDN 161 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~r 161 (229)
.|.||++||.|-. .. .|......++ .++.|+.+|+++.+...... ..+.....+.+.+.. .++
T Consensus 4 ~~~iv~~HG~~~~---~~--~~~~~~~~l~--~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~---------~~~ 66 (245)
T TIGR01738 4 NVHLVLIHGWGMN---AE--VFRCLDEELS--AHFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQA---------PDP 66 (245)
T ss_pred CceEEEEcCCCCc---hh--hHHHHHHhhc--cCeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHhC---------CCC
Confidence 4689999995322 22 2555555554 37999999999865533221 123333333333322 258
Q ss_pred EEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 162 CFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 162 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+.++|||+||.+++.++.++++ .++++|+ ++.
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~il~~~~ 99 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPD--------RVRALVTVASS 99 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHH--------hhheeeEecCC
Confidence 9999999999999999998887 6888887 544
No 80
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.91 E-value=1.5e-08 Score=81.68 Aligned_cols=109 Identities=16% Similarity=0.190 Sum_probs=72.8
Q ss_pred EEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC--CCCC----------
Q 040311 65 VRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE--HRLP---------- 132 (229)
Q Consensus 65 ~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~--~~~~---------- 132 (229)
..+..|++. ++.|.||++|+- .|-. ...+.++..++. .||.|+++|+-.... ....
T Consensus 3 ay~~~P~~~------~~~~~Vvv~~d~---~G~~--~~~~~~ad~lA~-~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~ 70 (218)
T PF01738_consen 3 AYVARPEGG------GPRPAVVVIHDI---FGLN--PNIRDLADRLAE-EGYVVLAPDLFGGRGAPPSDPEEAFAAMREL 70 (218)
T ss_dssp EEEEEETTS------SSEEEEEEE-BT---TBS---HHHHHHHHHHHH-TT-EEEEE-CCCCTS--CCCHHCHHHHHHHC
T ss_pred EEEEeCCCC------CCCCEEEEEcCC---CCCc--hHHHHHHHHHHh-cCCCEEecccccCCCCCccchhhHHHHHHHH
Confidence 446677653 578999999982 2222 224567788875 599999999654322 1110
Q ss_pred ------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cc
Q 040311 133 ------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FP 200 (229)
Q Consensus 133 ------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P 200 (229)
....|+.++++++.++. .++.+||+++|+|.||.+|+.++.+.+ .+++++. +|
T Consensus 71 ~~~~~~~~~~~~~aa~~~l~~~~------~~~~~kig~vGfc~GG~~a~~~a~~~~---------~~~a~v~~yg 130 (218)
T PF01738_consen 71 FAPRPEQVAADLQAAVDYLRAQP------EVDPGKIGVVGFCWGGKLALLLAARDP---------RVDAAVSFYG 130 (218)
T ss_dssp HHHSHHHHHHHHHHHHHHHHCTT------TCEEEEEEEEEETHHHHHHHHHHCCTT---------TSSEEEEES-
T ss_pred HhhhHHHHHHHHHHHHHHHHhcc------ccCCCcEEEEEEecchHHhhhhhhhcc---------ccceEEEEcC
Confidence 12356677788888764 367789999999999999999886653 4889999 88
No 81
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.90 E-value=1.4e-08 Score=81.71 Aligned_cols=66 Identities=18% Similarity=0.227 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
...++..+.+.+.+...+....+++++||+|.|+|.||.+|+.++.+.+. +++|+++ |+++-....
T Consensus 79 ~~~~i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--------~~~gvv~lsG~~~~~~~ 145 (216)
T PF02230_consen 79 DEAGIEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--------PLAGVVALSGYLPPESE 145 (216)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--------TSSEEEEES---TTGCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--------CcCEEEEeecccccccc
Confidence 35566666666555554444457999999999999999999999999887 6899999 988765443
No 82
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.89 E-value=2.2e-08 Score=86.53 Aligned_cols=99 Identities=20% Similarity=0.167 Sum_probs=67.9
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC---CchHHHHHHHHHHHHHhcchhhhcCC
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL---PAAYDDAMDALHWIKNTQDDWLMKHA 157 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~---~~~~~D~~~a~~~l~~~~~~~~~~~~ 157 (229)
..|.||++||.+.. ... |......+. .++.|+++|+++.+.... ...+.+....+..+.+. +
T Consensus 130 ~~~~vl~~HG~~~~---~~~--~~~~~~~l~--~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~--------~ 194 (371)
T PRK14875 130 DGTPVVLIHGFGGD---LNN--WLFNHAALA--AGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA--------L 194 (371)
T ss_pred CCCeEEEECCCCCc---cch--HHHHHHHHh--cCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh--------c
Confidence 45789999984322 222 445555554 359999999998754421 23355555555444433 3
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+..+++|+|||+||.+|+.++.+.++ +++++++ +|..
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~--------~v~~lv~~~~~~ 232 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQ--------RVASLTLIAPAG 232 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCch--------heeEEEEECcCC
Confidence 45689999999999999999988776 6899999 7763
No 83
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.89 E-value=1.1e-08 Score=84.09 Aligned_cols=93 Identities=19% Similarity=0.130 Sum_probs=61.7
Q ss_pred cEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcE
Q 040311 83 PLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNC 162 (229)
Q Consensus 83 pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri 162 (229)
|.||++||.|.. .. .|......+. ..+.|+.+|+++.+....+.. .+.....+.+.+. ..+++
T Consensus 14 ~~ivllHG~~~~---~~--~w~~~~~~L~--~~~~vi~~Dl~G~G~S~~~~~-~~~~~~~~~l~~~---------~~~~~ 76 (256)
T PRK10349 14 VHLVLLHGWGLN---AE--VWRCIDEELS--SHFTLHLVDLPGFGRSRGFGA-LSLADMAEAVLQQ---------APDKA 76 (256)
T ss_pred CeEEEECCCCCC---hh--HHHHHHHHHh--cCCEEEEecCCCCCCCCCCCC-CCHHHHHHHHHhc---------CCCCe
Confidence 569999995432 22 2555566553 369999999998764432221 1122223333321 23689
Q ss_pred EEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cc
Q 040311 163 FLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FP 200 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P 200 (229)
.|+|||+||.+|+.+|.+.++ .|+++|+ .+
T Consensus 77 ~lvGhS~Gg~ia~~~a~~~p~--------~v~~lili~~ 107 (256)
T PRK10349 77 IWLGWSLGGLVASQIALTHPE--------RVQALVTVAS 107 (256)
T ss_pred EEEEECHHHHHHHHHHHhChH--------hhheEEEecC
Confidence 999999999999999998877 6889988 54
No 84
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.88 E-value=7.4e-09 Score=86.36 Aligned_cols=126 Identities=19% Similarity=0.202 Sum_probs=82.0
Q ss_pred CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcc-hHH---H-HHHHHhhCCcEEEEEecCCCCC--C---C
Q 040311 61 KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSL-SHE---F-CSNVAVELPAIVVSVDYRLAPE--H---R 130 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~-~~~---~-~~~~~~~~g~~vv~~dyr~~~~--~---~ 130 (229)
..+..++|+| +.. ..++.|+||..|+-|.......... ... . ...+ .+.||+||.+|.|+... . .
T Consensus 3 v~L~adv~~P-~~~---~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~-~~~GY~vV~~D~RG~g~S~G~~~~ 77 (272)
T PF02129_consen 3 VRLAADVYRP-GAD---GGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPF-AERGYAVVVQDVRGTGGSEGEFDP 77 (272)
T ss_dssp -EEEEEEEEE---T---TSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHH-HHTT-EEEEEE-TTSTTS-S-B-T
T ss_pred CEEEEEEEec-CCC---CCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHH-HhCCCEEEEECCcccccCCCcccc
Confidence 3478899999 221 2378999999998542110000000 000 0 0114 46799999999997532 1 1
Q ss_pred -CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCC
Q 040311 131 -LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIK 206 (229)
Q Consensus 131 -~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~ 206 (229)
.+...+|..++++|+.++. | +..||+++|.|.+|..++.+|.+.+. .+++++. ++..|.-.
T Consensus 78 ~~~~e~~D~~d~I~W~~~Qp--w-----s~G~VGm~G~SY~G~~q~~~A~~~~p--------~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 78 MSPNEAQDGYDTIEWIAAQP--W-----SNGKVGMYGISYGGFTQWAAAARRPP--------HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TSHHHHHHHHHHHHHHHHCT--T-----EEEEEEEEEETHHHHHHHHHHTTT-T--------TEEEEEEESE-SBTCC
T ss_pred CChhHHHHHHHHHHHHHhCC--C-----CCCeEEeeccCHHHHHHHHHHhcCCC--------CceEEEecccCCcccc
Confidence 4457899999999999872 2 34699999999999999999875444 6999999 88877655
No 85
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.85 E-value=1.9e-08 Score=79.70 Aligned_cols=98 Identities=16% Similarity=0.127 Sum_probs=72.8
Q ss_pred cEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-------CCCchHHHHHHHHHHHHHhcchhhhc
Q 040311 83 PLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-------RLPAAYDDAMDALHWIKNTQDDWLMK 155 (229)
Q Consensus 83 pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-------~~~~~~~D~~~a~~~l~~~~~~~~~~ 155 (229)
-.|+++|| | .|+.+. .+.+.+. ..+.||.|.+++|++.+.. +...-++|+.+++++|.+..
T Consensus 16 ~AVLllHG--F-TGt~~D--vr~Lgr~-L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~g------ 83 (243)
T COG1647 16 RAVLLLHG--F-TGTPRD--VRMLGRY-LNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAG------ 83 (243)
T ss_pred EEEEEEec--c-CCCcHH--HHHHHHH-HHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcC------
Confidence 68999999 2 444443 3444444 4567999999999987543 22345789999999998653
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
-+.|+++|-||||-+|+.+|.+++ +++++. |+.+...
T Consensus 84 ---y~eI~v~GlSmGGv~alkla~~~p----------~K~iv~m~a~~~~k 121 (243)
T COG1647 84 ---YDEIAVVGLSMGGVFALKLAYHYP----------PKKIVPMCAPVNVK 121 (243)
T ss_pred ---CCeEEEEeecchhHHHHHHHhhCC----------ccceeeecCCcccc
Confidence 268999999999999999998874 578888 7666543
No 86
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.85 E-value=1.4e-08 Score=83.28 Aligned_cols=123 Identities=19% Similarity=0.235 Sum_probs=75.8
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcC-CcccccCCCCcchHHHHHHHHhhCC---cEEEEEecCCCC----C-----
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHG-GGFIFFSAASSLSHEFCSNVAVELP---AIVVSVDYRLAP----E----- 128 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHG-Gg~~~g~~~~~~~~~~~~~~~~~~g---~~vv~~dyr~~~----~----- 128 (229)
...+.||+|++.. ..++.|||+++|| ++|.... .....+..+..+.+ .++|.++..... .
T Consensus 7 ~~~~~VylP~~y~---~~~~~PvlylldG~~~~~~~~----~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~ 79 (251)
T PF00756_consen 7 DRRVWVYLPPGYD---PSKPYPVLYLLDGQSGWFRNG----NAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPA 79 (251)
T ss_dssp EEEEEEEECTTGG---TTTTEEEEEEESHTTHHHHHH----HHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSB
T ss_pred eEEEEEEECCCCC---CCCCCEEEEEccCCccccccc----hHHHHHHHHHHhCCCCceEEEEEeccccccccccccccc
Confidence 3678899999842 4488999999999 5553111 11223444444322 455666643322 0
Q ss_pred --------CCCCchHHH-H-HHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 129 --------HRLPAAYDD-A-MDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 129 --------~~~~~~~~D-~-~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
........+ + ...+.++.++. .+++.+.+|+|+|+||..|+.++.++++ .+.++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~------~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--------~F~~~~~ 145 (251)
T PF00756_consen 80 GSSRRADDSGGGDAYETFLTEELIPYIEANY------RTDPDRRAIAGHSMGGYGALYLALRHPD--------LFGAVIA 145 (251)
T ss_dssp CTTCBCTSTTTHHHHHHHHHTHHHHHHHHHS------SEEECCEEEEEETHHHHHHHHHHHHSTT--------TESEEEE
T ss_pred ccccccccCCCCcccceehhccchhHHHHhc------ccccceeEEeccCCCcHHHHHHHHhCcc--------ccccccc
Confidence 000011122 1 13445555554 4455559999999999999999999998 6889999
Q ss_pred -ccccCCC
Q 040311 199 -FPFFGAI 205 (229)
Q Consensus 199 -~P~~~~~ 205 (229)
||.++..
T Consensus 146 ~S~~~~~~ 153 (251)
T PF00756_consen 146 FSGALDPS 153 (251)
T ss_dssp ESEESETT
T ss_pred cCcccccc
Confidence 9886543
No 87
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.84 E-value=1.2e-08 Score=88.84 Aligned_cols=132 Identities=20% Similarity=0.248 Sum_probs=68.6
Q ss_pred CCccEEEEEcC-CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC-------------CC-------------CC
Q 040311 80 TKLPLIVDFHG-GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE-------------HR-------------LP 132 (229)
Q Consensus 80 ~~~pviv~iHG-Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~-------------~~-------------~~ 132 (229)
++.|+|||-|| ||. ... |..++..+|.. ||+|+++++|-... .. +.
T Consensus 98 ~~~PvvIFSHGlgg~----R~~--yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGS----RTS--YSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLR 170 (379)
T ss_dssp S-EEEEEEE--TT------TTT--THHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE--
T ss_pred CCCCEEEEeCCCCcc----hhh--HHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccc
Confidence 67999999999 332 222 78899999864 99999999884210 00 00
Q ss_pred -----c-----------hHHHHHHHHHHHHHhcch--------------hhhcCCCCCcEEEEecchhHHHHHHHHHHhh
Q 040311 133 -----A-----------AYDDAMDALHWIKNTQDD--------------WLMKHADFDNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 133 -----~-----------~~~D~~~a~~~l~~~~~~--------------~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
. -..|+..+++.+.+.... .+...+|.++|+++|||.||+.++.++.+..
T Consensus 171 ~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~ 250 (379)
T PF03403_consen 171 DFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT 250 (379)
T ss_dssp ---GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc
Confidence 0 125666677666541110 1112467889999999999999998887764
Q ss_pred hhcCCCCCcceeEEEe-ccccCCCCCChhhhhccCCCCCCchhhcccC
Q 040311 183 AQVNNLLPLKIKGLLL-FPFFGAIKRTTSELRLVNDRVSPPCLSDLMW 229 (229)
Q Consensus 183 ~~~~~~~~~~v~g~il-~P~~~~~~~~~~~~~~~~~~~l~~~~~~~~w 229 (229)
. +++.|+ -||.-..... .......|+|-.....+.|
T Consensus 251 r---------~~~~I~LD~W~~Pl~~~--~~~~i~~P~L~InSe~f~~ 287 (379)
T PF03403_consen 251 R---------FKAGILLDPWMFPLGDE--IYSKIPQPLLFINSESFQW 287 (379)
T ss_dssp T-----------EEEEES---TTS-GG--GGGG--S-EEEEEETTT--
T ss_pred C---------cceEEEeCCcccCCCcc--cccCCCCCEEEEECcccCC
Confidence 3 777777 8886432211 1122356666655544433
No 88
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.83 E-value=4.3e-07 Score=80.05 Aligned_cols=121 Identities=21% Similarity=0.194 Sum_probs=75.6
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhC---CcEEEEEecCCCC----CCCCCch
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVEL---PAIVVSVDYRLAP----EHRLPAA 134 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~---g~~vv~~dyr~~~----~~~~~~~ 134 (229)
...+.+|+|.+.. .+++|+|+++||+.|... . .....+..+..+. .+++|.+|..... +.+....
T Consensus 193 ~r~v~VY~P~~y~----~~~~PvlyllDG~~w~~~---~-~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~ 264 (411)
T PRK10439 193 SRRVWIYTTGDAA----PEERPLAILLDGQFWAES---M-PVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNAD 264 (411)
T ss_pred ceEEEEEECCCCC----CCCCCEEEEEECHHhhhc---C-CHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHH
Confidence 4788899998652 267899999999877521 1 1233444554432 2467788742111 1111111
Q ss_pred H-HHH-HHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 135 Y-DDA-MDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 135 ~-~D~-~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+ ..+ ...+-++.++.. ...|+++.+|+|+|+||..|+.+++++++ .+.++++ ||.+
T Consensus 265 f~~~l~~eLlP~I~~~y~----~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 265 FWLAVQQELLPQVRAIAP----FSDDADRTVVAGQSFGGLAALYAGLHWPE--------RFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHHHhCC----CCCCccceEEEEEChHHHHHHHHHHhCcc--------cccEEEEeccce
Confidence 1 111 122334444332 14578899999999999999999999998 6888888 8865
No 89
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.82 E-value=6.2e-08 Score=82.02 Aligned_cols=98 Identities=17% Similarity=0.127 Sum_probs=65.3
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC-----chHHHHHHHHHHHHHhcchhhhcC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP-----AAYDDAMDALHWIKNTQDDWLMKH 156 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~-----~~~~D~~~a~~~l~~~~~~~~~~~ 156 (229)
.+.||++||+... ... ......+ ...++.|+++|+++.+....+ ....|....+..+.+..
T Consensus 27 ~~~lvllHG~~~~---~~~---~~~~~~~-~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------- 92 (306)
T TIGR01249 27 GKPVVFLHGGPGS---GTD---PGCRRFF-DPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL------- 92 (306)
T ss_pred CCEEEEECCCCCC---CCC---HHHHhcc-CccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-------
Confidence 3468999995332 111 1222223 235899999999986543322 23455555555555443
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+.+++.++|||+||.+++.++.++++ .++++|+ +++.
T Consensus 93 -~~~~~~lvG~S~GG~ia~~~a~~~p~--------~v~~lvl~~~~~ 130 (306)
T TIGR01249 93 -GIKNWLVFGGSWGSTLALAYAQTHPE--------VVTGLVLRGIFL 130 (306)
T ss_pred -CCCCEEEEEECHHHHHHHHHHHHChH--------hhhhheeecccc
Confidence 23589999999999999999999887 6888888 7654
No 90
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.80 E-value=5.3e-08 Score=84.48 Aligned_cols=97 Identities=18% Similarity=0.091 Sum_probs=62.6
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC----chHHHHHHHHHHHHHhcchhhhcCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP----AAYDDAMDALHWIKNTQDDWLMKHA 157 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~~ 157 (229)
.|.||++||.+.. ...|...+..+. + ++.|+++|+++.+....+ ..+++....+.-+.+..
T Consensus 88 gp~lvllHG~~~~-----~~~w~~~~~~L~-~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-------- 152 (360)
T PLN02679 88 GPPVLLVHGFGAS-----IPHWRRNIGVLA-K-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-------- 152 (360)
T ss_pred CCeEEEECCCCCC-----HHHHHHHHHHHh-c-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh--------
Confidence 4789999995422 122555666554 3 799999999987654332 12333332222222221
Q ss_pred CCCcEEEEecchhHHHHHHHHHH-hhhhcCCCCCcceeEEEe-ccc
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLR-ATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~-~~~~~~~~~~~~v~g~il-~P~ 201 (229)
..+++.|+|||+||.+++.++.+ .++ +|+++|+ +|.
T Consensus 153 ~~~~~~lvGhS~Gg~ia~~~a~~~~P~--------rV~~LVLi~~~ 190 (360)
T PLN02679 153 VQKPTVLIGNSVGSLACVIAASESTRD--------LVRGLVLLNCA 190 (360)
T ss_pred cCCCeEEEEECHHHHHHHHHHHhcChh--------hcCEEEEECCc
Confidence 23689999999999999888864 566 6999999 664
No 91
>PLN02872 triacylglycerol lipase
Probab=98.80 E-value=1.6e-08 Score=88.66 Aligned_cols=139 Identities=12% Similarity=0.018 Sum_probs=79.4
Q ss_pred ceEEeeEEEcCCCCEEEEEEE-eCCCCCCCCCCCccEEEEEcCCcccccCCCCc-chHHHHHHHHhhCCcEEEEEecCCC
Q 040311 49 VVLSKDVTVNQSKNTWVRIFV-PRQALDSPSSTKLPLIVDFHGGGFIFFSAASS-LSHEFCSNVAVELPAIVVSVDYRLA 126 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~~~i~~-P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~-~~~~~~~~~~~~~g~~vv~~dyr~~ 126 (229)
++..++..+..+|+..+.++. |..... ....++|+|+++||.+......... ....+...++ +.||.|+.+|.|+.
T Consensus 41 gy~~e~h~v~T~DGy~L~l~ri~~~~~~-~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La-~~GydV~l~n~RG~ 118 (395)
T PLN02872 41 GYSCTEHTIQTKDGYLLALQRVSSRNPR-LGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILA-DHGFDVWVGNVRGT 118 (395)
T ss_pred CCCceEEEEECCCCcEEEEEEcCCCCCC-CCCCCCCeEEEeCcccccccceeecCcccchHHHHH-hCCCCccccccccc
Confidence 444555556556664444443 322110 0113468899999954322111000 0122333444 56999999999975
Q ss_pred CCC--------------CC--Cch-HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCC
Q 040311 127 PEH--------------RL--PAA-YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLL 189 (229)
Q Consensus 127 ~~~--------------~~--~~~-~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~ 189 (229)
... .+ .+. ..|+.++++++.+.. .+++.++|||+||.+++.++. .++ .
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---------~~~v~~VGhS~Gg~~~~~~~~-~p~-----~ 183 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---------NSKIFIVGHSQGTIMSLAALT-QPN-----V 183 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---------CCceEEEEECHHHHHHHHHhh-ChH-----H
Confidence 311 01 112 368888999887531 268999999999999985553 333 1
Q ss_pred CcceeEEEe-ccccCC
Q 040311 190 PLKIKGLLL-FPFFGA 204 (229)
Q Consensus 190 ~~~v~g~il-~P~~~~ 204 (229)
..+|+.+++ +|....
T Consensus 184 ~~~v~~~~~l~P~~~~ 199 (395)
T PLN02872 184 VEMVEAAALLCPISYL 199 (395)
T ss_pred HHHHHHHHHhcchhhh
Confidence 124777777 777543
No 92
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.79 E-value=9.4e-08 Score=83.52 Aligned_cols=99 Identities=15% Similarity=0.059 Sum_probs=67.9
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC-------chHHHHHHHHHHHHHhcchhh
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP-------AAYDDAMDALHWIKNTQDDWL 153 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~-------~~~~D~~~a~~~l~~~~~~~~ 153 (229)
..|.||++||.+.. ...|...+..++ .++.|+++|+++.+....+ ..+++....+..+.+..
T Consensus 126 ~~~~ivllHG~~~~-----~~~w~~~~~~L~--~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l---- 194 (383)
T PLN03084 126 NNPPVLLIHGFPSQ-----AYSYRKVLPVLS--KNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL---- 194 (383)
T ss_pred CCCeEEEECCCCCC-----HHHHHHHHHHHh--cCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh----
Confidence 45789999995432 122556666664 3799999999976543222 23444444444333332
Q ss_pred hcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 154 MKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 154 ~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
..+++.|+|+|+||.+++.++.++++ +|+++|+ +|..
T Consensus 195 ----~~~~~~LvG~s~GG~ia~~~a~~~P~--------~v~~lILi~~~~ 232 (383)
T PLN03084 195 ----KSDKVSLVVQGYFSPPVVKYASAHPD--------KIKKLILLNPPL 232 (383)
T ss_pred ----CCCCceEEEECHHHHHHHHHHHhChH--------hhcEEEEECCCC
Confidence 23589999999999999999999888 7999999 7654
No 93
>PRK07581 hypothetical protein; Validated
Probab=98.78 E-value=8.1e-08 Score=82.40 Aligned_cols=128 Identities=11% Similarity=0.031 Sum_probs=75.2
Q ss_pred ceEEeeEEEcCCCCEE-EEEEEeC-CCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHH---HHHHhhCCcEEEEEec
Q 040311 49 VVLSKDVTVNQSKNTW-VRIFVPR-QALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFC---SNVAVELPAIVVSVDY 123 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~-~~i~~P~-~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~---~~~~~~~g~~vv~~dy 123 (229)
.+...+++...+..+. +++++-. +.. ...+.|+||++||+++.. .. +...+ ..+. ..++.|+++|+
T Consensus 9 ~~~~~~~~~~~g~~~~~~~l~y~~~G~~---~~~~~~~vll~~~~~~~~---~~--~~~~~~~~~~l~-~~~~~vi~~D~ 79 (339)
T PRK07581 9 TFDLGDVELQSGATLPDARLAYKTYGTL---NAAKDNAILYPTWYSGTH---QD--NEWLIGPGRALD-PEKYFIIIPNM 79 (339)
T ss_pred EEeeCCeEecCCCCcCCceEEEEecCcc---CCCCCCEEEEeCCCCCCc---cc--chhhccCCCccC-cCceEEEEecC
Confidence 4455666666554432 3333322 210 013457788888765431 11 11111 1332 35899999999
Q ss_pred CCCCCCCCCc---------------hHHHHHHHHHHHHHhcchhhhcCCCCCc-EEEEecchhHHHHHHHHHHhhhhcCC
Q 040311 124 RLAPEHRLPA---------------AYDDAMDALHWIKNTQDDWLMKHADFDN-CFLIGSSAGGNIAYYAGLRATAQVNN 187 (229)
Q Consensus 124 r~~~~~~~~~---------------~~~D~~~a~~~l~~~~~~~~~~~~d~~r-i~l~G~S~GG~la~~~a~~~~~~~~~ 187 (229)
++.+....+. ..+|+......+.+.. ++ ++ ..|+|+|+||.+|+.+|.++++
T Consensus 80 ~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l------gi--~~~~~lvG~S~GG~va~~~a~~~P~---- 147 (339)
T PRK07581 80 FGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF------GI--ERLALVVGWSMGAQQTYHWAVRYPD---- 147 (339)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh------CC--CceEEEEEeCHHHHHHHHHHHHCHH----
Confidence 9865443221 1345544444455433 33 57 4789999999999999999998
Q ss_pred CCCcceeEEEe-ccc
Q 040311 188 LLPLKIKGLLL-FPF 201 (229)
Q Consensus 188 ~~~~~v~g~il-~P~ 201 (229)
+|+++|+ +..
T Consensus 148 ----~V~~Lvli~~~ 158 (339)
T PRK07581 148 ----MVERAAPIAGT 158 (339)
T ss_pred ----HHhhheeeecC
Confidence 7889888 544
No 94
>PLN02578 hydrolase
Probab=98.78 E-value=4.2e-08 Score=84.89 Aligned_cols=94 Identities=19% Similarity=0.074 Sum_probs=61.7
Q ss_pred cEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCc---hHHH-HHHHHHHHHHhcchhhhcCCC
Q 040311 83 PLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPA---AYDD-AMDALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 83 pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~---~~~D-~~~a~~~l~~~~~~~~~~~~d 158 (229)
|.||++||.|- + ...+......++ .++.|+++|+++.+....+. ...+ ...+.+++.+. .
T Consensus 87 ~~vvliHG~~~---~--~~~w~~~~~~l~--~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~---------~ 150 (354)
T PLN02578 87 LPIVLIHGFGA---S--AFHWRYNIPELA--KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV---------V 150 (354)
T ss_pred CeEEEECCCCC---C--HHHHHHHHHHHh--cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh---------c
Confidence 55899999432 1 122444556554 36999999999875543321 1222 12223333322 1
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cc
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FP 200 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P 200 (229)
.+++.++|||+||.+|+.+|.++++ .++++++ ++
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~p~--------~v~~lvLv~~ 185 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGYPE--------LVAGVALLNS 185 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhChH--------hcceEEEECC
Confidence 2689999999999999999999988 6899988 54
No 95
>PRK11460 putative hydrolase; Provisional
Probab=98.76 E-value=1.1e-07 Score=77.57 Aligned_cols=39 Identities=18% Similarity=0.063 Sum_probs=32.0
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+++.++|+|+|+|+||.+++.++.+.++ .+.++++ ++.+
T Consensus 99 ~~~~~~i~l~GfS~Gg~~al~~a~~~~~--------~~~~vv~~sg~~ 138 (232)
T PRK11460 99 GVGASATALIGFSQGAIMALEAVKAEPG--------LAGRVIAFSGRY 138 (232)
T ss_pred CCChhhEEEEEECHHHHHHHHHHHhCCC--------cceEEEEecccc
Confidence 6788999999999999999999887665 4566776 7654
No 96
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=98.71 E-value=5.5e-07 Score=75.54 Aligned_cols=122 Identities=20% Similarity=0.248 Sum_probs=79.1
Q ss_pred ceEEeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC
Q 040311 49 VVLSKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE 128 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~ 128 (229)
.+..+-++++. +++.+..... +..|+|+++||--..+.+ ++.....++. .|+.|+++|.|+.+.
T Consensus 21 ~~~hk~~~~~g-----I~~h~~e~g~-----~~gP~illlHGfPe~wys-----wr~q~~~la~-~~~rviA~DlrGyG~ 84 (322)
T KOG4178|consen 21 AISHKFVTYKG-----IRLHYVEGGP-----GDGPIVLLLHGFPESWYS-----WRHQIPGLAS-RGYRVIAPDLRGYGF 84 (322)
T ss_pred hcceeeEEEcc-----EEEEEEeecC-----CCCCEEEEEccCCccchh-----hhhhhhhhhh-cceEEEecCCCCCCC
Confidence 45566666633 4455555443 577999999994332221 3344555654 589999999998654
Q ss_pred CCCCch-----HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccc
Q 040311 129 HRLPAA-----YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPF 201 (229)
Q Consensus 129 ~~~~~~-----~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~ 201 (229)
..-|.. +.....-+..+.++. + -+|++++||+.|+.+|..+|+.+++ +|.|++. .|+
T Consensus 85 Sd~P~~~~~Yt~~~l~~di~~lld~L------g--~~k~~lvgHDwGaivaw~la~~~Pe--------rv~~lv~~nv~~ 148 (322)
T KOG4178|consen 85 SDAPPHISEYTIDELVGDIVALLDHL------G--LKKAFLVGHDWGAIVAWRLALFYPE--------RVDGLVTLNVPF 148 (322)
T ss_pred CCCCCCcceeeHHHHHHHHHHHHHHh------c--cceeEEEeccchhHHHHHHHHhChh--------hcceEEEecCCC
Confidence 433322 222222222223322 1 3799999999999999999999999 7889888 455
Q ss_pred c
Q 040311 202 F 202 (229)
Q Consensus 202 ~ 202 (229)
.
T Consensus 149 ~ 149 (322)
T KOG4178|consen 149 P 149 (322)
T ss_pred C
Confidence 4
No 97
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.71 E-value=1.4e-07 Score=81.50 Aligned_cols=73 Identities=12% Similarity=0.109 Sum_probs=51.8
Q ss_pred hCCcEEEEEecCC--CCCCC----------C-----CchHHHHHHHHHHHHHhcchhhhcCCCCCc-EEEEecchhHHHH
Q 040311 113 ELPAIVVSVDYRL--APEHR----------L-----PAAYDDAMDALHWIKNTQDDWLMKHADFDN-CFLIGSSAGGNIA 174 (229)
Q Consensus 113 ~~g~~vv~~dyr~--~~~~~----------~-----~~~~~D~~~a~~~l~~~~~~~~~~~~d~~r-i~l~G~S~GG~la 174 (229)
..+|.|+++|+++ ..... + +..++|....+.-+.+.. ++ ++ +.|+|||+||.++
T Consensus 70 ~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~--~~~~~l~G~S~Gg~ia 141 (351)
T TIGR01392 70 TDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL------GI--EQIAAVVGGSMGGMQA 141 (351)
T ss_pred CCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc------CC--CCceEEEEECHHHHHH
Confidence 3589999999998 21111 0 123566655555555443 33 56 9999999999999
Q ss_pred HHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 175 YYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 175 ~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+.++.++++ .++++|+ ++.
T Consensus 142 ~~~a~~~p~--------~v~~lvl~~~~ 161 (351)
T TIGR01392 142 LEWAIDYPE--------RVRAIVVLATS 161 (351)
T ss_pred HHHHHHChH--------hhheEEEEccC
Confidence 999999988 6889888 554
No 98
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.70 E-value=5.4e-08 Score=83.29 Aligned_cols=121 Identities=19% Similarity=0.180 Sum_probs=63.4
Q ss_pred CCCccEEEEEcCCcccccCCCCcchHHHHHHHHhh--CCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhh-hc
Q 040311 79 STKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVE--LPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWL-MK 155 (229)
Q Consensus 79 ~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~--~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~-~~ 155 (229)
...+|++|++|| |............+...+... .+++|+.+|+.......+.........+-+.+.+.+.... ..
T Consensus 68 n~~~pt~iiiHG--w~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHG--WTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE----TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcC--cCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 367899999999 332221222234455656655 5899999999864444454443333222222222111111 13
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
+++.++|.|+|||+|||+|-.++.+... ...-.+|.|+=- .|.+..
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~---~~ki~rItgLDPAgP~F~~ 192 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKG---GGKIGRITGLDPAGPLFEN 192 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT------SSEEEEES-B-TTTTT
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccC---cceeeEEEecCcccccccC
Confidence 7899999999999999999999988754 111124555555 666654
No 99
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.68 E-value=7.3e-08 Score=86.52 Aligned_cols=135 Identities=13% Similarity=0.126 Sum_probs=97.6
Q ss_pred EEeeEEEcCCCC--EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC
Q 040311 51 LSKDVTVNQSKN--TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE 128 (229)
Q Consensus 51 ~~~~v~~~~~~~--~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~ 128 (229)
..+.+.+.+.+| +++.|..-+..+ ..+++|+++|.|||--..-... |......+ ...|++....|-|++++
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k---~dg~~P~LLygYGay~isl~p~---f~~srl~l-ld~G~Vla~a~VRGGGe 512 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIK---LDGSKPLLLYGYGAYGISLDPS---FRASRLSL-LDRGWVLAYANVRGGGE 512 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhh---hcCCCceEEEEecccceeeccc---cccceeEE-EecceEEEEEeeccCcc
Confidence 444455555555 666666644433 3468999999999744432222 22222223 34799999999998876
Q ss_pred CCC-----------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEE
Q 040311 129 HRL-----------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLL 197 (229)
Q Consensus 129 ~~~-----------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~i 197 (229)
... .+.++|..++.++|.++. ...++++++.|.|+||-++.++.-+.|+ -+.++|
T Consensus 513 ~G~~WHk~G~lakKqN~f~Dfia~AeyLve~g------yt~~~kL~i~G~SaGGlLvga~iN~rPd--------LF~avi 578 (712)
T KOG2237|consen 513 YGEQWHKDGRLAKKQNSFDDFIACAEYLVENG------YTQPSKLAIEGGSAGGLLVGACINQRPD--------LFGAVI 578 (712)
T ss_pred cccchhhccchhhhcccHHHHHHHHHHHHHcC------CCCccceeEecccCccchhHHHhccCch--------Hhhhhh
Confidence 443 256899999999999985 5688999999999999999999988888 578999
Q ss_pred e-ccccCCCC
Q 040311 198 L-FPFFGAIK 206 (229)
Q Consensus 198 l-~P~~~~~~ 206 (229)
+ -|++|...
T Consensus 579 a~VpfmDvL~ 588 (712)
T KOG2237|consen 579 AKVPFMDVLN 588 (712)
T ss_pred hcCcceehhh
Confidence 9 99988543
No 100
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.66 E-value=2.6e-07 Score=83.51 Aligned_cols=136 Identities=15% Similarity=0.107 Sum_probs=97.8
Q ss_pred ceEEeeEEEcCCCC--EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC
Q 040311 49 VVLSKDVTVNQSKN--TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA 126 (229)
Q Consensus 49 ~~~~~~v~~~~~~~--~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~ 126 (229)
...++.+.....++ +++.++.-++.. ..++.|+++|.-|..- ......+....-.+. ..|++....--|++
T Consensus 416 ~Y~s~riwa~a~dgv~VPVSLvyrkd~~---~~g~~p~lLygYGaYG---~s~~p~Fs~~~lSLl-DRGfiyAIAHVRGG 488 (682)
T COG1770 416 DYVSRRIWATADDGVQVPVSLVYRKDTK---LDGSAPLLLYGYGAYG---ISMDPSFSIARLSLL-DRGFVYAIAHVRGG 488 (682)
T ss_pred HeEEEEEEEEcCCCcEeeEEEEEecccC---CCCCCcEEEEEecccc---ccCCcCcccceeeee-cCceEEEEEEeecc
Confidence 46666676665554 677777766533 3478899999998322 222222333333333 46988877778877
Q ss_pred CCCCC-----------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeE
Q 040311 127 PEHRL-----------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKG 195 (229)
Q Consensus 127 ~~~~~-----------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g 195 (229)
.+-.. ...+.|..++.++|.++. ..++++|+++|.||||.|+.+++-..|+ ..+|
T Consensus 489 gelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g------~~~~~~i~a~GGSAGGmLmGav~N~~P~--------lf~~ 554 (682)
T COG1770 489 GELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEG------YTSPDRIVAIGGSAGGMLMGAVANMAPD--------LFAG 554 (682)
T ss_pred cccChHHHHhhhhhhccccHHHHHHHHHHHHHcC------cCCccceEEeccCchhHHHHHHHhhChh--------hhhh
Confidence 65433 256899999999999874 4688999999999999999999988888 6899
Q ss_pred EEe-ccccCCC
Q 040311 196 LLL-FPFFGAI 205 (229)
Q Consensus 196 ~il-~P~~~~~ 205 (229)
+|+ .||.|..
T Consensus 555 iiA~VPFVDvl 565 (682)
T COG1770 555 IIAQVPFVDVL 565 (682)
T ss_pred eeecCCccchh
Confidence 999 9998743
No 101
>PRK11071 esterase YqiA; Provisional
Probab=98.65 E-value=2.7e-07 Score=72.97 Aligned_cols=79 Identities=22% Similarity=0.169 Sum_probs=51.6
Q ss_pred cEEEEEcCCcccccCCCCcchH-HHHHHHHhh--CCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 83 PLIVDFHGGGFIFFSAASSLSH-EFCSNVAVE--LPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 83 pviv~iHGGg~~~g~~~~~~~~-~~~~~~~~~--~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
|.|||+||.+- +... +. .....++.+ .++.|+.+|.+..+ .+....+..+.++. +.
T Consensus 2 p~illlHGf~s---s~~~--~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~~--------~~ 60 (190)
T PRK11071 2 STLLYLHGFNS---SPRS--AKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLEH--------GG 60 (190)
T ss_pred CeEEEECCCCC---Ccch--HHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHHc--------CC
Confidence 67999999322 2222 22 123333333 37899999988653 34445555555432 23
Q ss_pred CcEEEEecchhHHHHHHHHHHhh
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
+++.++|+|+||.+|+.++.+.+
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~~ 83 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCFM 83 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHcC
Confidence 58999999999999999998864
No 102
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.64 E-value=6.1e-07 Score=91.16 Aligned_cols=98 Identities=19% Similarity=0.160 Sum_probs=66.4
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC-----------chHHHHHHHHHHHHHhc
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP-----------AAYDDAMDALHWIKNTQ 149 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~-----------~~~~D~~~a~~~l~~~~ 149 (229)
..|.|||+||.+.. .. .|......+. .++.|+.+|+++.+....+ ..+++....+.-+.++
T Consensus 1370 ~~~~vVllHG~~~s---~~--~w~~~~~~L~--~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~- 1441 (1655)
T PLN02980 1370 EGSVVLFLHGFLGT---GE--DWIPIMKAIS--GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH- 1441 (1655)
T ss_pred CCCeEEEECCCCCC---HH--HHHHHHHHHh--CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH-
Confidence 45799999995432 22 2555666554 3699999999986543321 1234444444333332
Q ss_pred chhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 150 DDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 150 ~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
.+.+++.|+|||+||.+|+.++.++++ .|+++|+ ++.
T Consensus 1442 -------l~~~~v~LvGhSmGG~iAl~~A~~~P~--------~V~~lVlis~~ 1479 (1655)
T PLN02980 1442 -------ITPGKVTLVGYSMGARIALYMALRFSD--------KIEGAVIISGS 1479 (1655)
T ss_pred -------hCCCCEEEEEECHHHHHHHHHHHhChH--------hhCEEEEECCC
Confidence 234689999999999999999999887 6888888 654
No 103
>COG0400 Predicted esterase [General function prediction only]
Probab=98.63 E-value=1.4e-07 Score=75.38 Aligned_cols=109 Identities=20% Similarity=0.179 Sum_probs=68.9
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecC-----------CCCCCCCC--chHHHHHHHHHHHH
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYR-----------LAPEHRLP--AAYDDAMDALHWIK 146 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr-----------~~~~~~~~--~~~~D~~~a~~~l~ 146 (229)
...|+||++||-| ++... +..+...++ -.+.++++.=+ ......+. ....+.....+++.
T Consensus 16 p~~~~iilLHG~G---gde~~--~~~~~~~~~--P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 16 PAAPLLILLHGLG---GDELD--LVPLPELIL--PNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCcEEEEEecCC---CChhh--hhhhhhhcC--CCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 5678999999943 23222 223333333 23556555411 11122222 12334444555555
Q ss_pred HhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCC
Q 040311 147 NTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIK 206 (229)
Q Consensus 147 ~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~ 206 (229)
....+ .++|.+|+++.|+|.||++++.++.+++. .++++++ +|.+-...
T Consensus 89 ~~~~~---~gi~~~~ii~~GfSqGA~ial~~~l~~~~--------~~~~ail~~g~~~~~~ 138 (207)
T COG0400 89 ELAEE---YGIDSSRIILIGFSQGANIALSLGLTLPG--------LFAGAILFSGMLPLEP 138 (207)
T ss_pred HHHHH---hCCChhheEEEecChHHHHHHHHHHhCch--------hhccchhcCCcCCCCC
Confidence 55555 48999999999999999999999999987 6889999 88875544
No 104
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.56 E-value=7e-07 Score=76.88 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=49.1
Q ss_pred CCcEEEEEecCCCCCCCC-CchHHHHHHHHHHHHHhcchhhhcCCCCCc-EEEEecchhHHHHHHHHHHhhhhcCCCCCc
Q 040311 114 LPAIVVSVDYRLAPEHRL-PAAYDDAMDALHWIKNTQDDWLMKHADFDN-CFLIGSSAGGNIAYYAGLRATAQVNNLLPL 191 (229)
Q Consensus 114 ~g~~vv~~dyr~~~~~~~-~~~~~D~~~a~~~l~~~~~~~~~~~~d~~r-i~l~G~S~GG~la~~~a~~~~~~~~~~~~~ 191 (229)
.++.|+++|+|+.+...- +..+.|....+.-+.+.. ++ ++ +.|+|||+||.+|+.++.++++
T Consensus 98 ~~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l------~l--~~~~~lvG~SmGG~vA~~~A~~~P~-------- 161 (343)
T PRK08775 98 ARFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL------GI--ARLHAFVGYSYGALVGLQFASRHPA-------- 161 (343)
T ss_pred cccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CC--CcceEEEEECHHHHHHHHHHHHChH--------
Confidence 379999999997643221 112333333333333322 22 34 5799999999999999999988
Q ss_pred ceeEEEe-cccc
Q 040311 192 KIKGLLL-FPFF 202 (229)
Q Consensus 192 ~v~g~il-~P~~ 202 (229)
+|+++|+ ++..
T Consensus 162 ~V~~LvLi~s~~ 173 (343)
T PRK08775 162 RVRTLVVVSGAH 173 (343)
T ss_pred hhheEEEECccc
Confidence 7999999 6643
No 105
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.55 E-value=6.4e-07 Score=75.12 Aligned_cols=102 Identities=22% Similarity=0.244 Sum_probs=71.3
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC------CchHHHHHHHHHHHHHhcchhh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL------PAAYDDAMDALHWIKNTQDDWL 153 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~------~~~~~D~~~a~~~l~~~~~~~~ 153 (229)
++.|.++.+|| ..|+... ++.+.+.++.+.+..|+++|-|..+..+. ....+|+...++++....
T Consensus 50 ~~~Pp~i~lHG---l~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~---- 120 (315)
T KOG2382|consen 50 ERAPPAIILHG---LLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGST---- 120 (315)
T ss_pred CCCCceEEecc---cccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHccccc----
Confidence 67899999999 6777765 78899999999999999999996544332 234455555555444321
Q ss_pred hcCCCCCcEEEEecchhH-HHHHHHHHHhhhhcCCCCCcceeEEEe--ccc
Q 040311 154 MKHADFDNCFLIGSSAGG-NIAYYAGLRATAQVNNLLPLKIKGLLL--FPF 201 (229)
Q Consensus 154 ~~~~d~~ri~l~G~S~GG-~la~~~a~~~~~~~~~~~~~~v~g~il--~P~ 201 (229)
...++.|.|||||| -++++.+...++ ...+.++. +|.
T Consensus 121 ----~~~~~~l~GHsmGG~~~~m~~t~~~p~-------~~~rliv~D~sP~ 160 (315)
T KOG2382|consen 121 ----RLDPVVLLGHSMGGVKVAMAETLKKPD-------LIERLIVEDISPG 160 (315)
T ss_pred ----ccCCceecccCcchHHHHHHHHHhcCc-------ccceeEEEecCCc
Confidence 23689999999999 555555555555 23456666 674
No 106
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.54 E-value=2.1e-06 Score=77.80 Aligned_cols=126 Identities=11% Similarity=0.049 Sum_probs=76.4
Q ss_pred CCEEEEEEEeCCCCCCCCCCCccEEEEEcC---CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC----CCc
Q 040311 61 KNTWVRIFVPRQALDSPSSTKLPLIVDFHG---GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR----LPA 133 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~pviv~iHG---Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~----~~~ 133 (229)
+-+.+.-|.|.... ..++-|+++|| .+|++.-. ..+.+++.++. .|+.|+.+|++...... +..
T Consensus 172 ~~~eLi~Y~P~t~~-----~~~~PlLiVp~~i~k~yilDL~---p~~Slv~~L~~-qGf~V~~iDwrgpg~s~~~~~~dd 242 (532)
T TIGR01838 172 ELFQLIQYEPTTET-----VHKTPLLIVPPWINKYYILDLR---PQNSLVRWLVE-QGHTVFVISWRNPDASQADKTFDD 242 (532)
T ss_pred CcEEEEEeCCCCCc-----CCCCcEEEECcccccceeeecc---cchHHHHHHHH-CCcEEEEEECCCCCcccccCChhh
Confidence 44677778776532 24456889998 33332111 12467777764 59999999999754322 112
Q ss_pred h-HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCC
Q 040311 134 A-YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIK 206 (229)
Q Consensus 134 ~-~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~ 206 (229)
- .+++..+++.+.+.. +.+++.++|||+||.+++.++..+... ..+.+|+++++ +..+|..+
T Consensus 243 Y~~~~i~~al~~v~~~~--------g~~kv~lvG~cmGGtl~a~ala~~aa~---~~~~rv~slvll~t~~Df~~ 306 (532)
T TIGR01838 243 YIRDGVIAALEVVEAIT--------GEKQVNCVGYCIGGTLLSTALAYLAAR---GDDKRIKSATFFTTLLDFSD 306 (532)
T ss_pred hHHHHHHHHHHHHHHhc--------CCCCeEEEEECcCcHHHHHHHHHHHHh---CCCCccceEEEEecCcCCCC
Confidence 2 245677777777543 347899999999999875433222110 00125888888 66566554
No 107
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.52 E-value=1.8e-06 Score=72.32 Aligned_cols=117 Identities=10% Similarity=0.016 Sum_probs=67.9
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCC----CCCCCCCchHHHHHHHHHHHHHhcchhhhcC
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRL----APEHRLPAAYDDAMDALHWIKNTQDDWLMKH 156 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~----~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~ 156 (229)
+.-+||||-|=+ .......|-.-+...+...++.++-+..+. .+........+|+..+++|++..... .
T Consensus 32 ~~~~llfIGGLt---DGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g----~ 104 (303)
T PF08538_consen 32 APNALLFIGGLT---DGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGG----H 104 (303)
T ss_dssp SSSEEEEE--TT-----TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------
T ss_pred CCcEEEEECCCC---CCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhcc----c
Confidence 445899998811 112222355544444566799999998664 34444556789999999999987311 1
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
...++|+|+|||-|+.-++.++.+... . ....+|.|+|| +|+-|-+..
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~--~-~~~~~VdG~ILQApVSDREa~ 153 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNP--S-PSRPPVDGAILQAPVSDREAI 153 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT------CCCEEEEEEEEE---TTST
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCc--c-ccccceEEEEEeCCCCChhHh
Confidence 256899999999999999999987653 1 11357999999 999875443
No 108
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.43 E-value=6.3e-06 Score=69.64 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=79.0
Q ss_pred EeeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCC-cchHHHHHHHHhhCCcEEEEEecCCCCCCC
Q 040311 52 SKDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAAS-SLSHEFCSNVAVELPAIVVSVDYRLAPEHR 130 (229)
Q Consensus 52 ~~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~-~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~ 130 (229)
.+.+++.. +++.++-+.=... ..++...|+++-|.|...-.... .........++.+.+.+|+.+|||+-....
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~~----~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~ 186 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQP----EAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST 186 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeCC----CCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC
Confidence 34444444 6666654432211 11455689999997665433111 012235677888899999999999753322
Q ss_pred C----CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 131 L----PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 131 ~----~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
. .....|..+.++|++++. .|+.+++|++.|||.||.+++.++.+.
T Consensus 187 G~~s~~dLv~~~~a~v~yL~d~~-----~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 187 GPPSRKDLVKDYQACVRYLRDEE-----QGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCCCHHHHHHHHHHHHHHHHhcc-----cCCChheEEEeeccccHHHHHHHHHhc
Confidence 2 245678888899998754 278899999999999999988765553
No 109
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.43 E-value=1.4e-06 Score=74.38 Aligned_cols=122 Identities=19% Similarity=0.119 Sum_probs=83.6
Q ss_pred EeeEEEcCC---CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC
Q 040311 52 SKDVTVNQS---KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE 128 (229)
Q Consensus 52 ~~~v~~~~~---~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~ 128 (229)
..++++.+. ..+.+++|+|.....+....+.|+|++-||-|-. ...+......++ +.|++|..++..++..
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~-----~~~f~~~A~~lA-s~Gf~Va~~~hpgs~~ 111 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY-----VTGFAWLAEHLA-SYGFVVAAPDHPGSNA 111 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCC-----ccchhhhHHHHh-hCceEEEeccCCCccc
Confidence 566666544 3478899999877522223488999999993322 222555666666 5699999999876421
Q ss_pred CC----------CC-----chHHHHHHHHHHHHHhcc-hhhhcCCCCCcEEEEecchhHHHHHHHHH
Q 040311 129 HR----------LP-----AAYDDAMDALHWIKNTQD-DWLMKHADFDNCFLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 129 ~~----------~~-----~~~~D~~~a~~~l~~~~~-~~~~~~~d~~ri~l~G~S~GG~la~~~a~ 179 (229)
.. +. +...|+...+.+|.+.-. .-+...+|+.+|.+.|||.||+.++.++.
T Consensus 112 ~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 112 GGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred ccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcc
Confidence 11 11 335788888888887710 10123589999999999999999998874
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.43 E-value=2.1e-06 Score=80.59 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=59.2
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC----------------------------
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL---------------------------- 131 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~---------------------------- 131 (229)
...|+||++||-+. ... .|..++..++ +.|+.|+++|+++.++..+
T Consensus 447 ~g~P~VVllHG~~g---~~~--~~~~lA~~La-~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRD 520 (792)
T TIGR03502 447 DGWPVVIYQHGITG---AKE--NALAFAGTLA-AAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARD 520 (792)
T ss_pred CCCcEEEEeCCCCC---CHH--HHHHHHHHHH-hCCcEEEEeCCCCCCccccccccccccccccCccceecccccccccc
Confidence 45689999999321 222 2556666665 4599999999987544322
Q ss_pred --CchHHHHHHHHHHHH------HhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhh
Q 040311 132 --PAAYDDAMDALHWIK------NTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 132 --~~~~~D~~~a~~~l~------~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
...+.|+......+. ...... ...+..+++++||||||.+++.++....
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~--~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGI--NVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccc--cCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 122344444444333 110000 1246679999999999999999997643
No 111
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.40 E-value=9.2e-07 Score=73.55 Aligned_cols=108 Identities=22% Similarity=0.324 Sum_probs=72.3
Q ss_pred CCCccEEEEEcC-CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC---------C---CCC--------------
Q 040311 79 STKLPLIVDFHG-GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP---------E---HRL-------------- 131 (229)
Q Consensus 79 ~~~~pviv~iHG-Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~---------~---~~~-------------- 131 (229)
..+.|+|||-|| ||+. . .|..++..+|. .|++|.+++.|-.. . ..+
T Consensus 115 ~~k~PvvvFSHGLggsR----t--~YSa~c~~LAS-hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~e 187 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSR----T--LYSAYCTSLAS-HGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANE 187 (399)
T ss_pred CCCccEEEEecccccch----h--hHHHHhhhHhh-CceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCc
Confidence 478999999999 4432 2 37788999985 59999999988421 0 000
Q ss_pred -----C-----chHHHHHHHHHHHHHhc---------------chhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcC
Q 040311 132 -----P-----AAYDDAMDALHWIKNTQ---------------DDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVN 186 (229)
Q Consensus 132 -----~-----~~~~D~~~a~~~l~~~~---------------~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~ 186 (229)
. .-..+|..|++-+.+.. -+.++..+|.+++.++|||.||+.++.......+
T Consensus 188 kef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~--- 264 (399)
T KOG3847|consen 188 KEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD--- 264 (399)
T ss_pred eeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---
Confidence 0 12467778877666522 1113345788999999999999888777665444
Q ss_pred CCCCcceeEEEe-cccc
Q 040311 187 NLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 187 ~~~~~~v~g~il-~P~~ 202 (229)
++..|+ -.|.
T Consensus 265 ------FrcaI~lD~WM 275 (399)
T KOG3847|consen 265 ------FRCAIALDAWM 275 (399)
T ss_pred ------eeeeeeeeeee
Confidence 555555 5554
No 112
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.36 E-value=4.1e-06 Score=73.18 Aligned_cols=73 Identities=12% Similarity=0.075 Sum_probs=50.1
Q ss_pred hCCcEEEEEecCCC-CCC--C----------C-----CchHHHHHHHHHHHHHhcchhhhcCCCCCc-EEEEecchhHHH
Q 040311 113 ELPAIVVSVDYRLA-PEH--R----------L-----PAAYDDAMDALHWIKNTQDDWLMKHADFDN-CFLIGSSAGGNI 173 (229)
Q Consensus 113 ~~g~~vv~~dyr~~-~~~--~----------~-----~~~~~D~~~a~~~l~~~~~~~~~~~~d~~r-i~l~G~S~GG~l 173 (229)
..++.|+++|.++. ... + + +-.++|....+.-+.+.. ++ ++ +.|+|||+||.+
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l------~~--~~~~~lvG~S~Gg~i 160 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL------GI--TRLAAVVGGSMGGMQ 160 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh------CC--CCceEEEEECHHHHH
Confidence 34899999998862 110 0 0 123556555554444443 33 46 589999999999
Q ss_pred HHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 174 AYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 174 a~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
++.++.++++ +|+++|+ ++.
T Consensus 161 a~~~a~~~p~--------~v~~lvl~~~~ 181 (379)
T PRK00175 161 ALEWAIDYPD--------RVRSALVIASS 181 (379)
T ss_pred HHHHHHhChH--------hhhEEEEECCC
Confidence 9999999988 7899998 543
No 113
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.36 E-value=7.5e-06 Score=66.48 Aligned_cols=111 Identities=18% Similarity=0.144 Sum_probs=64.3
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHH-------hhCCcEEEEEecCCCCCCC----CCchHHHHHHHHHHHHHhcc
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVA-------VELPAIVVSVDYRLAPEHR----LPAAYDDAMDALHWIKNTQD 150 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~-------~~~g~~vv~~dyr~~~~~~----~~~~~~D~~~a~~~l~~~~~ 150 (229)
...|||+||.+ |+... .+.+..... ....+.++.+||......- ...+.+-+..+++.+.+...
T Consensus 4 g~pVlFIhG~~---Gs~~q--~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNA---GSYKQ--VRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCC---CCHhH--HHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhh
Confidence 34699999932 22221 233333221 1224778888887532221 12233344455555555432
Q ss_pred hhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccCCC
Q 040311 151 DWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFGAI 205 (229)
Q Consensus 151 ~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~~~ 205 (229)
. ....+++|+|+||||||-+|..++..... ....|+.+|. +|.....
T Consensus 79 ~---~~~~~~~vilVgHSmGGlvar~~l~~~~~-----~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 79 S---NRPPPRSVILVGHSMGGLVARSALSLPNY-----DPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred h---ccCCCCceEEEEEchhhHHHHHHHhcccc-----ccccEEEEEEEcCCCCCcc
Confidence 1 13567899999999999888877765432 2236888888 7886654
No 114
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.34 E-value=3.1e-06 Score=67.41 Aligned_cols=70 Identities=24% Similarity=0.239 Sum_probs=56.5
Q ss_pred cEEEEEecCCCCCCCC------C-chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCC
Q 040311 116 AIVVSVDYRLAPEHRL------P-AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNL 188 (229)
Q Consensus 116 ~~vv~~dyr~~~~~~~------~-~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~ 188 (229)
|.|+++|.|+.+...- + -...|....++.+++.. ++ +++.++|||+||.+++.++..+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l------~~--~~~~~vG~S~Gg~~~~~~a~~~p~----- 67 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL------GI--KKINLVGHSMGGMLALEYAAQYPE----- 67 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH------TT--SSEEEEEETHHHHHHHHHHHHSGG-----
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh------CC--CCeEEEEECCChHHHHHHHHHCch-----
Confidence 5789999998765441 1 23688888888888865 33 459999999999999999999998
Q ss_pred CCcceeEEEe-ccc
Q 040311 189 LPLKIKGLLL-FPF 201 (229)
Q Consensus 189 ~~~~v~g~il-~P~ 201 (229)
+|+++++ ++.
T Consensus 68 ---~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ---RVKKLVLISPP 78 (230)
T ss_dssp ---GEEEEEEESES
T ss_pred ---hhcCcEEEeee
Confidence 7999999 775
No 115
>PRK05855 short chain dehydrogenase; Validated
Probab=98.33 E-value=6.3e-06 Score=75.35 Aligned_cols=86 Identities=17% Similarity=0.078 Sum_probs=53.0
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCc-----hHHHHHHHHHHHHHhcchhhhc
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPA-----AYDDAMDALHWIKNTQDDWLMK 155 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~-----~~~D~~~a~~~l~~~~~~~~~~ 155 (229)
..|.|||+||.+.. . ..|......+ ..++.|+++|+++.+....+. .+++....+..+.+..
T Consensus 24 ~~~~ivllHG~~~~---~--~~w~~~~~~L--~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l------ 90 (582)
T PRK05855 24 DRPTVVLVHGYPDN---H--EVWDGVAPLL--ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAV------ 90 (582)
T ss_pred CCCeEEEEcCCCch---H--HHHHHHHHHh--hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHh------
Confidence 35789999995422 1 2255566665 358999999999875433211 1333333333333322
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHH
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~ 180 (229)
+. ..++.|+|||+||.+++.++.+
T Consensus 91 ~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 91 SP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred CC-CCcEEEEecChHHHHHHHHHhC
Confidence 11 1349999999999888877766
No 116
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.32 E-value=1.4e-05 Score=66.59 Aligned_cols=120 Identities=23% Similarity=0.249 Sum_probs=82.0
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhh--CCcEEEEEecCCCCCCCCC----------chHHHHHHHHHHHHHhc
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVE--LPAIVVSVDYRLAPEHRLP----------AAYDDAMDALHWIKNTQ 149 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~--~g~~vv~~dyr~~~~~~~~----------~~~~D~~~a~~~l~~~~ 149 (229)
+++||||.|.--. ..-|..++..+..+ ..+.|.++.+.+....... ..-+++...++++.+..
T Consensus 2 ~~li~~IPGNPGl-----v~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGL-----VEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCCh-----HHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 5689999995222 22377888888766 4789999998864221111 22355556666666655
Q ss_pred chhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCCChhhhhc
Q 040311 150 DDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKRTTSELRL 214 (229)
Q Consensus 150 ~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~~~~~~~~ 214 (229)
... .....+++|+|||.|+.+++.++.+.++ ...+|.++++ .|.+..-..+++-..+
T Consensus 77 ~~~---~~~~~~liLiGHSIGayi~levl~r~~~-----~~~~V~~~~lLfPTi~~ia~Sp~G~~l 134 (266)
T PF10230_consen 77 PQK---NKPNVKLILIGHSIGAYIALEVLKRLPD-----LKFRVKKVILLFPTIEDIAKSPNGRRL 134 (266)
T ss_pred hhh---cCCCCcEEEEeCcHHHHHHHHHHHhccc-----cCCceeEEEEeCCccccccCCchhHHH
Confidence 431 1145789999999999999999999872 2346899999 9998766666665443
No 117
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.26 E-value=6.5e-06 Score=74.18 Aligned_cols=136 Identities=15% Similarity=0.118 Sum_probs=90.0
Q ss_pred eEEeeEEEcCCC--CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHH--HHhhCCcEEEEEecCC
Q 040311 50 VLSKDVTVNQSK--NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSN--VAVELPAIVVSVDYRL 125 (229)
Q Consensus 50 ~~~~~v~~~~~~--~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~--~~~~~g~~vv~~dyr~ 125 (229)
+..+++.+.-.+ .+.++||+|++. ++.|+++..+=.-+.........-...... ++...||+||..|.|+
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~~------g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG 90 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAGA------GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRG 90 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCCC------CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccc
Confidence 445555555444 577899999976 789999999921121111000000112221 3345799999999998
Q ss_pred CCCC--CC---C-chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-
Q 040311 126 APEH--RL---P-AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL- 198 (229)
Q Consensus 126 ~~~~--~~---~-~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il- 198 (229)
+... .+ . ...+|....++|+.++.- .-.+|+.+|.|.+|...+++|...+. .+++++.
T Consensus 91 ~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpW-------sNG~Vgm~G~SY~g~tq~~~Aa~~pP--------aLkai~p~ 155 (563)
T COG2936 91 RGGSEGVFDPESSREAEDGYDTIEWLAKQPW-------SNGNVGMLGLSYLGFTQLAAAALQPP--------ALKAIAPT 155 (563)
T ss_pred cccCCcccceeccccccchhHHHHHHHhCCc-------cCCeeeeecccHHHHHHHHHHhcCCc--------hheeeccc
Confidence 6332 11 2 367899999999998642 22699999999999999998876554 5788888
Q ss_pred ccccCCCC
Q 040311 199 FPFFGAIK 206 (229)
Q Consensus 199 ~P~~~~~~ 206 (229)
++..|...
T Consensus 156 ~~~~D~y~ 163 (563)
T COG2936 156 EGLVDRYR 163 (563)
T ss_pred cccccccc
Confidence 77776433
No 118
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.25 E-value=4.1e-06 Score=75.17 Aligned_cols=136 Identities=14% Similarity=0.091 Sum_probs=99.1
Q ss_pred ceEEeeEEEcCCCCEEEEEEEe-CCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC
Q 040311 49 VVLSKDVTVNQSKNTWVRIFVP-RQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP 127 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~~~i~~P-~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~ 127 (229)
+.+++.....+.++.++-.|.= ++.. . .+.|++||--||=.+.- ...|......+. +.|-+.|..|-|+++
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~K~~~---~-d~~pTll~aYGGF~vsl---tP~fs~~~~~WL-erGg~~v~ANIRGGG 462 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVRKGAK---K-DENPTLLYAYGGFNISL---TPRFSGSRKLWL-ERGGVFVLANIRGGG 462 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEecCCc---C-CCCceEEEecccccccc---CCccchhhHHHH-hcCCeEEEEecccCC
Confidence 5667777777777765544433 5543 2 37899988888744422 223555554454 568888899999886
Q ss_pred CCC-----------CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEE
Q 040311 128 EHR-----------LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGL 196 (229)
Q Consensus 128 ~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~ 196 (229)
+.. -.+.++|..++.++|.++. -..|+++++.|.|-||-|...+..+.|+ .+.++
T Consensus 463 EfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rg------itspe~lgi~GgSNGGLLvg~alTQrPe--------lfgA~ 528 (648)
T COG1505 463 EFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRG------ITSPEKLGIQGGSNGGLLVGAALTQRPE--------LFGAA 528 (648)
T ss_pred ccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhC------CCCHHHhhhccCCCCceEEEeeeccChh--------hhCce
Confidence 543 3456899999999999874 2478999999999999999988888888 56778
Q ss_pred Ee-ccccCCCC
Q 040311 197 LL-FPFFGAIK 206 (229)
Q Consensus 197 il-~P~~~~~~ 206 (229)
++ .|.+|+-.
T Consensus 529 v~evPllDMlR 539 (648)
T COG1505 529 VCEVPLLDMLR 539 (648)
T ss_pred eeccchhhhhh
Confidence 88 99988654
No 119
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.24 E-value=6.4e-06 Score=66.39 Aligned_cols=96 Identities=17% Similarity=0.176 Sum_probs=63.7
Q ss_pred EEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC-CCCCCchHHHHHHH-HHHHHHhcchhhhcCCCCCc
Q 040311 84 LIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP-EHRLPAAYDDAMDA-LHWIKNTQDDWLMKHADFDN 161 (229)
Q Consensus 84 viv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~-~~~~~~~~~D~~~a-~~~l~~~~~~~~~~~~d~~r 161 (229)
.|+++|++|- ....|..+++.+... .+.|..+++.+.. .......+++.... ++.+.+.. ...+
T Consensus 2 ~lf~~p~~gG-----~~~~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~--------~~gp 67 (229)
T PF00975_consen 2 PLFCFPPAGG-----SASSYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQ--------PEGP 67 (229)
T ss_dssp EEEEESSTTC-----SGGGGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHT--------SSSS
T ss_pred eEEEEcCCcc-----CHHHHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhC--------CCCC
Confidence 5889998542 223378888888654 5889999988763 22223444444333 33333332 1238
Q ss_pred EEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 162 CFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 162 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
+.|+|+|+||.+|..+|.+..+ ....+..+++
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~-----~G~~v~~l~l 99 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEE-----AGEEVSRLIL 99 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHH-----TT-SESEEEE
T ss_pred eeehccCccHHHHHHHHHHHHH-----hhhccCceEE
Confidence 9999999999999999999877 2446888887
No 120
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.24 E-value=1.4e-05 Score=65.50 Aligned_cols=140 Identities=14% Similarity=0.169 Sum_probs=79.7
Q ss_pred eEEeeEEEcCCCC-EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC--
Q 040311 50 VLSKDVTVNQSKN-TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA-- 126 (229)
Q Consensus 50 ~~~~~v~~~~~~~-~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~-- 126 (229)
...+++.....+. .++.++.|++.. +..++|||.++=| .-+.+.... .+...++...-...+.+.|+..
T Consensus 9 ~~~~~l~s~~~~~~yri~i~~P~~~~---~~~~YpVlY~lDG-n~vf~~~~~----~~~~~~~~~~~~~iv~iGye~~~~ 80 (264)
T COG2819 9 FRERDLKSANTGRKYRIFIATPKNYP---KPGGYPVLYMLDG-NAVFNALTE----IMLRILADLPPPVIVGIGYETILV 80 (264)
T ss_pred ceeEeeeecCCCcEEEEEecCCCCCC---CCCCCcEEEEecc-hhhhchHHH----HhhhhhhcCCCceEEEeccccccc
Confidence 4556666655554 567778888765 3344776555444 333322211 1233343333345566666641
Q ss_pred --CC------CCC-------------CchHHHHHHHHHHHHHhcchhhhc--CCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 127 --PE------HRL-------------PAAYDDAMDALHWIKNTQDDWLMK--HADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 127 --~~------~~~-------------~~~~~D~~~a~~~l~~~~~~~~~~--~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
+. .++ ...-.-..+-.++|.++...|+.. .++.++.+++|||+||-+++.+....++
T Consensus 81 ~~~~~r~~DyTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~ 160 (264)
T COG2819 81 FDPNRRAYDYTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD 160 (264)
T ss_pred cccccccccCCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcc
Confidence 00 000 001111233455566655544332 4788999999999999999999999877
Q ss_pred hcCCCCCcceeEEEe-ccccCCC
Q 040311 184 QVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 184 ~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
.+...++ ||-+...
T Consensus 161 --------~F~~y~~~SPSlWw~ 175 (264)
T COG2819 161 --------CFGRYGLISPSLWWH 175 (264)
T ss_pred --------hhceeeeecchhhhC
Confidence 5677777 7766443
No 121
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.22 E-value=1.4e-05 Score=78.01 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=69.0
Q ss_pred CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC--CCCchH-HH
Q 040311 61 KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH--RLPAAY-DD 137 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~--~~~~~~-~D 137 (229)
+...++-|.|...... .....+.||++||.+-.....+......+...+. +.|+.|+++|+...... .....+ ++
T Consensus 47 ~~~~l~~y~~~~~~~~-~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~-~~g~~v~~~d~G~~~~~~~~~~~~l~~~ 124 (994)
T PRK07868 47 PMYRLRRYFPPDNRPG-QPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILH-RAGLDPWVIDFGSPDKVEGGMERNLADH 124 (994)
T ss_pred CcEEEEEeCCCCcccc-ccCCCCcEEEECCCCCCccceecCCcccHHHHHH-HCCCEEEEEcCCCCChhHcCccCCHHHH
Confidence 5577888877653200 0134578999999432211111111122355554 56999999998643221 111222 22
Q ss_pred H---HHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 138 A---MDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 138 ~---~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
+ ..+++.+++. . -+++.|+|||+||.+++.++...++ .+|+++++ +..+|
T Consensus 125 i~~l~~~l~~v~~~-------~--~~~v~lvG~s~GG~~a~~~aa~~~~-------~~v~~lvl~~~~~d 178 (994)
T PRK07868 125 VVALSEAIDTVKDV-------T--GRDVHLVGYSQGGMFCYQAAAYRRS-------KDIASIVTFGSPVD 178 (994)
T ss_pred HHHHHHHHHHHHHh-------h--CCceEEEEEChhHHHHHHHHHhcCC-------CccceEEEEecccc
Confidence 2 2223332222 1 2479999999999999888764432 15888887 44433
No 122
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.21 E-value=6.7e-05 Score=62.02 Aligned_cols=131 Identities=17% Similarity=0.197 Sum_probs=77.5
Q ss_pred eEEeeEEEcCCCC--EEEE-EEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC
Q 040311 50 VLSKDVTVNQSKN--TWVR-IFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA 126 (229)
Q Consensus 50 ~~~~~v~~~~~~~--~~~~-i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~ 126 (229)
+..+.+.++.+.+ +.++ +|.-... .+.+..+||-+|| .-|+... + .+++..+.+.|+.++.+||.+.
T Consensus 4 ~~~~~~k~~~~~~~~~~~~a~y~D~~~----~gs~~gTVv~~hG---sPGSH~D--F-kYi~~~l~~~~iR~I~iN~PGf 73 (297)
T PF06342_consen 4 LVRKLVKFQAENGKIVTVQAVYEDSLP----SGSPLGTVVAFHG---SPGSHND--F-KYIRPPLDEAGIRFIGINYPGF 73 (297)
T ss_pred eEEEEEEcccccCceEEEEEEEEecCC----CCCCceeEEEecC---CCCCccc--h-hhhhhHHHHcCeEEEEeCCCCC
Confidence 3445555555544 3443 4443322 2255679999999 3334333 3 3555566788999999999986
Q ss_pred CCCC-CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccC
Q 040311 127 PEHR-LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFG 203 (229)
Q Consensus 127 ~~~~-~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~ 203 (229)
.... ++.....-..-..|+.....+ .+++ +++..+|||.|+-.|+.++...+ ..|+++ +|.+-
T Consensus 74 ~~t~~~~~~~~~n~er~~~~~~ll~~---l~i~-~~~i~~gHSrGcenal~la~~~~----------~~g~~lin~~G~r 139 (297)
T PF06342_consen 74 GFTPGYPDQQYTNEERQNFVNALLDE---LGIK-GKLIFLGHSRGCENALQLAVTHP----------LHGLVLINPPGLR 139 (297)
T ss_pred CCCCCCcccccChHHHHHHHHHHHHH---cCCC-CceEEEEeccchHHHHHHHhcCc----------cceEEEecCCccc
Confidence 4322 222221111222233332222 2566 79999999999999999998763 457777 44454
Q ss_pred C
Q 040311 204 A 204 (229)
Q Consensus 204 ~ 204 (229)
.
T Consensus 140 ~ 140 (297)
T PF06342_consen 140 P 140 (297)
T ss_pred c
Confidence 3
No 123
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.20 E-value=8.6e-06 Score=69.75 Aligned_cols=97 Identities=18% Similarity=0.192 Sum_probs=62.3
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC-CCCCCc----hHHHHHHHHHHHHHhcchhhh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP-EHRLPA----AYDDAMDALHWIKNTQDDWLM 154 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~-~~~~~~----~~~D~~~a~~~l~~~~~~~~~ 154 (229)
...|.||++||-|-. ...|+.....+....|+.|.++|.-+.+ ....+. .+.+....++-+....
T Consensus 56 ~~~~pvlllHGF~~~-----~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~----- 125 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGAS-----SFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV----- 125 (326)
T ss_pred CCCCcEEEeccccCC-----cccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-----
Confidence 467889999993321 1225556666666667999999987743 222221 1233323222222211
Q ss_pred cCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEE
Q 040311 155 KHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLL 197 (229)
Q Consensus 155 ~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~i 197 (229)
--.++.|+|||+||.+|..+|..+++ .|++++
T Consensus 126 ---~~~~~~lvghS~Gg~va~~~Aa~~P~--------~V~~lv 157 (326)
T KOG1454|consen 126 ---FVEPVSLVGHSLGGIVALKAAAYYPE--------TVDSLV 157 (326)
T ss_pred ---cCcceEEEEeCcHHHHHHHHHHhCcc--------ccccee
Confidence 12459999999999999999999998 688888
No 124
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.17 E-value=8.7e-05 Score=70.41 Aligned_cols=87 Identities=8% Similarity=0.011 Sum_probs=62.2
Q ss_pred HHhhCCcEEEEEecCCCCCC-----C-CCchHHHHHHHHHHHHHhcchhhh--------cCCCCCcEEEEecchhHHHHH
Q 040311 110 VAVELPAIVVSVDYRLAPEH-----R-LPAAYDDAMDALHWIKNTQDDWLM--------KHADFDNCFLIGSSAGGNIAY 175 (229)
Q Consensus 110 ~~~~~g~~vv~~dyr~~~~~-----~-~~~~~~D~~~a~~~l~~~~~~~~~--------~~~d~~ri~l~G~S~GG~la~ 175 (229)
+....||+||.+|.|+..+. . .+...+|..++++|+..+...+.. ..=...+|+++|.|+||.++.
T Consensus 274 ~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~ 353 (767)
T PRK05371 274 YFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPN 353 (767)
T ss_pred HHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHH
Confidence 34457999999999975321 1 145679999999999965321000 001247999999999999999
Q ss_pred HHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 176 YAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 176 ~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
.+|...+. .++++|. +++.+.
T Consensus 354 ~aAa~~pp--------~LkAIVp~a~is~~ 375 (767)
T PRK05371 354 AVATTGVE--------GLETIIPEAAISSW 375 (767)
T ss_pred HHHhhCCC--------cceEEEeeCCCCcH
Confidence 99887655 5889988 887654
No 125
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.14 E-value=2.4e-05 Score=59.29 Aligned_cols=106 Identities=19% Similarity=0.220 Sum_probs=67.5
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC---CCC---CC--CchH-HHHHHHHHHHHHhcch
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA---PEH---RL--PAAY-DDAMDALHWIKNTQDD 151 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~---~~~---~~--~~~~-~D~~~a~~~l~~~~~~ 151 (229)
..-+||+-||.|-.+ ++......+..++ ..|+.|+.+++..- +.. +- ...+ .....++..++..
T Consensus 13 ~~~tilLaHGAGasm---dSt~m~~~a~~la-~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~--- 85 (213)
T COG3571 13 APVTILLAHGAGASM---DSTSMTAVAAALA-RRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG--- 85 (213)
T ss_pred CCEEEEEecCCCCCC---CCHHHHHHHHHHH-hCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc---
Confidence 446889999965443 3322344566665 46999999996531 111 11 1223 3334445555554
Q ss_pred hhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccCCCC
Q 040311 152 WLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFGAIK 206 (229)
Q Consensus 152 ~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~~~~ 206 (229)
.+-.++++.|+||||-++.+++-.... +|.++++ +||--..+
T Consensus 86 -----l~~gpLi~GGkSmGGR~aSmvade~~A--------~i~~L~clgYPfhppGK 129 (213)
T COG3571 86 -----LAEGPLIIGGKSMGGRVASMVADELQA--------PIDGLVCLGYPFHPPGK 129 (213)
T ss_pred -----ccCCceeeccccccchHHHHHHHhhcC--------CcceEEEecCccCCCCC
Confidence 344689999999999999999866544 4888887 89965433
No 126
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.07 E-value=1.3e-05 Score=62.64 Aligned_cols=100 Identities=24% Similarity=0.279 Sum_probs=68.8
Q ss_pred EEEEEcC-CcccccCCCCcchHHHHHHHHhhCCcEEEEEecC-CCCCCCCC-chHHHHHHHHHHHHHhcchhhhcCCCCC
Q 040311 84 LIVDFHG-GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYR-LAPEHRLP-AAYDDAMDALHWIKNTQDDWLMKHADFD 160 (229)
Q Consensus 84 viv~iHG-Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr-~~~~~~~~-~~~~D~~~a~~~l~~~~~~~~~~~~d~~ 160 (229)
++||+-| |||..- -...+..++ +.|+.|+.+|-. ..=...-| +...|+..+++...++. ..+
T Consensus 4 ~~v~~SGDgGw~~~------d~~~a~~l~-~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w--------~~~ 68 (192)
T PF06057_consen 4 LAVFFSGDGGWRDL------DKQIAEALA-KQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARW--------GRK 68 (192)
T ss_pred EEEEEeCCCCchhh------hHHHHHHHH-HCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHh--------CCc
Confidence 6788888 888521 245667776 569999999922 11112233 33578888887776654 337
Q ss_pred cEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 161 NCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+++|+|.|.|+-+.-.+..+.+.. ...+|+.++| +|-.
T Consensus 69 ~vvLiGYSFGADvlP~~~nrLp~~----~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 69 RVVLIGYSFGADVLPFIYNRLPAA----LRARVAQVVLLSPST 107 (192)
T ss_pred eEEEEeecCCchhHHHHHhhCCHH----HHhheeEEEEeccCC
Confidence 999999999999888888887762 2235888888 7764
No 127
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.03 E-value=5.2e-05 Score=59.74 Aligned_cols=36 Identities=36% Similarity=0.447 Sum_probs=27.4
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEeccccCCC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLLFPFFGAI 205 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il~P~~~~~ 205 (229)
+.+.|+|+|+||..|..++.++.- +++++.|.+...
T Consensus 59 ~~~~liGSSlGG~~A~~La~~~~~----------~avLiNPav~p~ 94 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAERYGL----------PAVLINPAVRPY 94 (187)
T ss_pred CCeEEEEEChHHHHHHHHHHHhCC----------CEEEEcCCCCHH
Confidence 459999999999999999988743 443337776533
No 128
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.03 E-value=7.4e-05 Score=59.36 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=70.2
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-------CCCchHHHHHHHHHHHHHhcchh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-------RLPAAYDDAMDALHWIKNTQDDW 152 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-------~~~~~~~D~~~a~~~l~~~~~~~ 152 (229)
+...++|++||. . +.....+....+...++.|+.++.+||++.++. .+....+|...+++++...
T Consensus 31 gs~e~vvlcHGf--r--S~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~---- 102 (269)
T KOG4667|consen 31 GSTEIVVLCHGF--R--SHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNS---- 102 (269)
T ss_pred CCceEEEEeecc--c--cccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccC----
Confidence 445689999992 2 233323333333444567999999999986542 2345569999999988753
Q ss_pred hhcCCCCCc--EEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 153 LMKHADFDN--CFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 153 ~~~~~d~~r--i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
+| -++.|||-||..++..+.++.+ ++-+|. ++-+++
T Consensus 103 -------nr~v~vi~gHSkGg~Vvl~ya~K~~d---------~~~viNcsGRydl 141 (269)
T KOG4667|consen 103 -------NRVVPVILGHSKGGDVVLLYASKYHD---------IRNVINCSGRYDL 141 (269)
T ss_pred -------ceEEEEEEeecCccHHHHHHHHhhcC---------chheEEcccccch
Confidence 33 3689999999999999999987 556666 555543
No 129
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.02 E-value=7.1e-05 Score=59.39 Aligned_cols=100 Identities=21% Similarity=0.175 Sum_probs=59.2
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhC-CcEEEEEecCCCCCCC-CCchHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVEL-PAIVVSVDYRLAPEHR-LPAAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~-g~~vv~~dyr~~~~~~-~~~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
.|.|+++||++..... +......+.... .+.++.+|.++..... ..........-+..+.+.. +.
T Consensus 21 ~~~i~~~hg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~------~~-- 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSV-----WRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDAL------GL-- 87 (282)
T ss_pred CCeEEEeCCCCCchhh-----hHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHh------CC--
Confidence 4489999996532211 222112222221 1899999999655443 0011111122222223222 33
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
.++.++|||+||.++..++.+.++ .++++++ ++..
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~~~p~--------~~~~~v~~~~~~ 123 (282)
T COG0596 88 EKVVLVGHSMGGAVALALALRHPD--------RVRGLVLIGPAP 123 (282)
T ss_pred CceEEEEecccHHHHHHHHHhcch--------hhheeeEecCCC
Confidence 349999999999999999999887 6889888 6554
No 130
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.99 E-value=7.3e-05 Score=63.28 Aligned_cols=99 Identities=18% Similarity=0.208 Sum_probs=73.0
Q ss_pred CCccEEEEEcCC-ccc-ccCCCCcchHHHHHHHHhhCCcEEEEEecCC---CCCCCCCch-HHHHHHHHHHHHHhcchhh
Q 040311 80 TKLPLIVDFHGG-GFI-FFSAASSLSHEFCSNVAVELPAIVVSVDYRL---APEHRLPAA-YDDAMDALHWIKNTQDDWL 153 (229)
Q Consensus 80 ~~~pviv~iHGG-g~~-~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~---~~~~~~~~~-~~D~~~a~~~l~~~~~~~~ 153 (229)
....+||.+-|. ||. .|.-. . ..+.||.|+..|..+ +.+.+++.. ..-+.++++|..++.
T Consensus 241 ngq~LvIC~EGNAGFYEvG~m~---------t-P~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L---- 306 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEVGVMN---------T-PAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL---- 306 (517)
T ss_pred CCceEEEEecCCccceEeeeec---------C-hHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHc----
Confidence 456789999983 332 22211 1 135799999999775 444556643 444556678888875
Q ss_pred hcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 154 MKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 154 ~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
+..++.|+|.|.|-||.-++++|+.+++ |+|+|+ +-|-|
T Consensus 307 --gf~~edIilygWSIGGF~~~waAs~YPd---------VkavvLDAtFDD 346 (517)
T KOG1553|consen 307 --GFRQEDIILYGWSIGGFPVAWAASNYPD---------VKAVVLDATFDD 346 (517)
T ss_pred --CCCccceEEEEeecCCchHHHHhhcCCC---------ceEEEeecchhh
Confidence 7889999999999999999999999999 999999 87754
No 131
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.88 E-value=0.00034 Score=63.47 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=77.6
Q ss_pred eeEEEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcC---CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC
Q 040311 53 KDVTVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHG---GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH 129 (229)
Q Consensus 53 ~~v~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHG---Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~ 129 (229)
.++.+. .+-+.+.-|.|.... ..+.| |++++. ..|++. -.. ..++++.+. +.|+.|+.+|++.-...
T Consensus 192 g~VV~~-n~l~eLiqY~P~te~----v~~~P-LLIVPp~INK~YIlD-L~P--~~SlVr~lv-~qG~~VflIsW~nP~~~ 261 (560)
T TIGR01839 192 GAVVFR-NEVLELIQYKPITEQ----QHARP-LLVVPPQINKFYIFD-LSP--EKSFVQYCL-KNQLQVFIISWRNPDKA 261 (560)
T ss_pred CceeEE-CCceEEEEeCCCCCC----cCCCc-EEEechhhhhhheee-cCC--cchHHHHHH-HcCCeEEEEeCCCCChh
Confidence 344442 244677778776432 13445 556665 233321 111 245666665 56999999999874322
Q ss_pred CC----CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCC-cceeEEEe-ccccC
Q 040311 130 RL----PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLP-LKIKGLLL-FPFFG 203 (229)
Q Consensus 130 ~~----~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~-~~v~g~il-~P~~~ 203 (229)
.. ..-++.+..+++.+++.- ..++|.++|+|+||.++++++..+.. +.+ .+|+.+++ ...+|
T Consensus 262 ~r~~~ldDYv~~i~~Ald~V~~~t--------G~~~vnl~GyC~GGtl~a~~~a~~aA----~~~~~~V~sltllatplD 329 (560)
T TIGR01839 262 HREWGLSTYVDALKEAVDAVRAIT--------GSRDLNLLGACAGGLTCAALVGHLQA----LGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHhc--------CCCCeeEEEECcchHHHHHHHHHHHh----cCCCCceeeEEeeecccc
Confidence 22 223345556666665542 34789999999999999974333332 111 26899888 66666
Q ss_pred CCC
Q 040311 204 AIK 206 (229)
Q Consensus 204 ~~~ 206 (229)
..+
T Consensus 330 f~~ 332 (560)
T TIGR01839 330 STM 332 (560)
T ss_pred cCC
Confidence 544
No 132
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.86 E-value=0.00023 Score=60.69 Aligned_cols=104 Identities=18% Similarity=0.258 Sum_probs=67.3
Q ss_pred EEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC----CCC-------CC
Q 040311 63 TWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA----PEH-------RL 131 (229)
Q Consensus 63 ~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~----~~~-------~~ 131 (229)
-.+.+.+|+... ...+|++|.+.|.|-..-..+ ..-++..++.+ |+..+.+.-... |.. ..
T Consensus 77 a~~~~~~P~~~~----~~~rp~~IhLagTGDh~f~rR---~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~V 148 (348)
T PF09752_consen 77 ARFQLLLPKRWD----SPYRPVCIHLAGTGDHGFWRR---RRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNV 148 (348)
T ss_pred eEEEEEECCccc----cCCCceEEEecCCCccchhhh---hhhhhhHHHHc-CcceEEEecccccccChhHhhcccccch
Confidence 455677787652 156899999999432210000 11135666655 988877763322 111 11
Q ss_pred -------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 132 -------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 132 -------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
...+.++...+.|+.++. ..+++|.|.||||++|..++...+.
T Consensus 149 sDl~~~g~~~i~E~~~Ll~Wl~~~G---------~~~~g~~G~SmGG~~A~laa~~~p~ 198 (348)
T PF09752_consen 149 SDLFVMGRATILESRALLHWLEREG---------YGPLGLTGISMGGHMAALAASNWPR 198 (348)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHhcC---------CCceEEEEechhHhhHHhhhhcCCC
Confidence 123578888888988762 2599999999999999999987766
No 133
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.86 E-value=0.00061 Score=61.15 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCC--CCCcceeEEEe-ccccCCCCCChhh
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNN--LLPLKIKGLLL-FPFFGAIKRTTSE 211 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~--~~~~~v~g~il-~P~~~~~~~~~~~ 211 (229)
.+|....++...+... .....+++|+|+|+||+.+..+|.+..+.... .....++|+++ .|+++......++
T Consensus 151 a~d~~~~l~~f~~~~p-----~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~ 225 (462)
T PTZ00472 151 SEDMYNFLQAFFGSHE-----DLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASY 225 (462)
T ss_pred HHHHHHHHHHHHHhCc-----cccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhhhcccH
Confidence 3555555544433332 23457899999999999999999887542111 13467899999 9999877666555
Q ss_pred hhc
Q 040311 212 LRL 214 (229)
Q Consensus 212 ~~~ 214 (229)
...
T Consensus 226 ~~~ 228 (462)
T PTZ00472 226 PRL 228 (462)
T ss_pred HHH
Confidence 443
No 134
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.86 E-value=6.7e-05 Score=62.48 Aligned_cols=135 Identities=20% Similarity=0.262 Sum_probs=82.2
Q ss_pred EeeEEEcCC--CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhh---CCcEEEEEecCCC
Q 040311 52 SKDVTVNQS--KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVE---LPAIVVSVDYRLA 126 (229)
Q Consensus 52 ~~~v~~~~~--~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~---~g~~vv~~dyr~~ 126 (229)
.+++.+.+. ...+.-+|+|.+.. ...++|+++++||=-|.-... -...+..++.+ ...++|.+||--.
T Consensus 69 ~~~~~~~~~l~~~~~~vv~lppgy~---~~~k~pvl~~~DG~~~~~~g~----i~~~~dsli~~g~i~pai~vgid~~d~ 141 (299)
T COG2382 69 VEEILYSSELLSERRRVVYLPPGYN---PLEKYPVLYLQDGQDWFRSGR----IPRILDSLIAAGEIPPAILVGIDYIDV 141 (299)
T ss_pred hhhhhhhhhhccceeEEEEeCCCCC---ccccccEEEEeccHHHHhcCC----hHHHHHHHHHcCCCCCceEEecCCCCH
Confidence 445555433 34666788888765 558899999999943321111 12234444432 3467888887642
Q ss_pred C----CCCCCc-hHHHHHH-HHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-c
Q 040311 127 P----EHRLPA-AYDDAMD-ALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-F 199 (229)
Q Consensus 127 ~----~~~~~~-~~~D~~~-a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~ 199 (229)
. +..... ..+.+.. .+-++.+.... .-+.++-+|+|.|+||..+++.++++++ .+.-++. |
T Consensus 142 ~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~----~~~a~~r~L~G~SlGG~vsL~agl~~Pe--------~FG~V~s~S 209 (299)
T COG2382 142 KKRREELHCNEAYWRFLAQELLPYVEERYPT----SADADGRVLAGDSLGGLVSLYAGLRHPE--------RFGHVLSQS 209 (299)
T ss_pred HHHHHHhcccHHHHHHHHHHhhhhhhccCcc----cccCCCcEEeccccccHHHHHHHhcCch--------hhceeeccC
Confidence 1 111111 1222222 23444444433 3466778999999999999999999998 5777777 8
Q ss_pred cccCCC
Q 040311 200 PFFGAI 205 (229)
Q Consensus 200 P~~~~~ 205 (229)
|.++..
T Consensus 210 ps~~~~ 215 (299)
T COG2382 210 GSFWWT 215 (299)
T ss_pred CccccC
Confidence 887644
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.84 E-value=0.00012 Score=57.81 Aligned_cols=58 Identities=19% Similarity=0.274 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
+..+...+.++.++... .+++.+||++.|.|+||.+|++.++.++. .+.|++. +++..
T Consensus 71 ~~~aa~~i~~Li~~e~~---~Gi~~~rI~igGfs~G~a~aL~~~~~~~~--------~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 71 LHRAADNIANLIDNEPA---NGIPSNRIGIGGFSQGGALALYSALTYPK--------ALGGIFALSGFLP 129 (206)
T ss_pred HHHHHHHHHHHHHHHHH---cCCCccceeEcccCchHHHHHHHHhcccc--------ccceeeccccccc
Confidence 34445555566555444 58999999999999999999999999866 5777777 77765
No 136
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.83 E-value=3.3e-05 Score=62.16 Aligned_cols=51 Identities=25% Similarity=0.395 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 136 DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 136 ~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+-...|++||+++. .++.++|+|+|.|.||-+|+.+|.++++ |+++|+ +|.
T Consensus 4 Eyfe~Ai~~L~~~p------~v~~~~Igi~G~SkGaelALllAs~~~~---------i~avVa~~ps 55 (213)
T PF08840_consen 4 EYFEEAIDWLKSHP------EVDPDKIGIIGISKGAELALLLASRFPQ---------ISAVVAISPS 55 (213)
T ss_dssp HHHHHHHHHHHCST------TB--SSEEEEEETHHHHHHHHHHHHSSS---------EEEEEEES--
T ss_pred HHHHHHHHHHHhCC------CCCCCCEEEEEECHHHHHHHHHHhcCCC---------ccEEEEeCCc
Confidence 44678999999985 6788999999999999999999999987 999998 655
No 137
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.81 E-value=0.00049 Score=60.45 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEE-EEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCF-LIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~-l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
.+.|....+..+.+.. ++ +++. ++|||+||.+|+.+|.++++ +++++|+
T Consensus 142 t~~d~~~~~~~ll~~l------gi--~~~~~vvG~SmGG~ial~~a~~~P~--------~v~~lv~ 191 (389)
T PRK06765 142 TILDFVRVQKELIKSL------GI--ARLHAVMGPSMGGMQAQEWAVHYPH--------MVERMIG 191 (389)
T ss_pred cHHHHHHHHHHHHHHc------CC--CCceEEEEECHHHHHHHHHHHHChH--------hhheEEE
Confidence 4677777666666543 33 5675 99999999999999999999 6888887
No 138
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.77 E-value=0.00027 Score=62.85 Aligned_cols=123 Identities=21% Similarity=0.221 Sum_probs=75.1
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-CC---------
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-RL--------- 131 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-~~--------- 131 (229)
....|.|.-...-. +..|++||+-|-|-.... .....+...+|.+.|..++.+++|..++. ++
T Consensus 13 tf~qRY~~n~~~~~----~~gpifl~~ggE~~~~~~---~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~ 85 (434)
T PF05577_consen 13 TFSQRYWVNDQYYK----PGGPIFLYIGGEGPIEPF---WINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLR 85 (434)
T ss_dssp EEEEEEEEE-TT------TTSEEEEEE--SS-HHHH---HHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTT
T ss_pred eEEEEEEEEhhhcC----CCCCEEEEECCCCccchh---hhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHH
Confidence 35566676655431 447888888553222110 11223677888999999999999975432 11
Q ss_pred ----CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 132 ----PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 132 ----~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
...+.|+...++++..+.. ..+..+++++|.|.||+||+.+-.++|+ .+.|.++ |+.+..
T Consensus 86 yLt~~QALaD~a~F~~~~~~~~~-----~~~~~pwI~~GgSY~G~Laaw~r~kyP~--------~~~ga~ASSapv~a 150 (434)
T PF05577_consen 86 YLTSEQALADLAYFIRYVKKKYN-----TAPNSPWIVFGGSYGGALAAWFRLKYPH--------LFDGAWASSAPVQA 150 (434)
T ss_dssp C-SHHHHHHHHHHHHHHHHHHTT-----TGCC--EEEEEETHHHHHHHHHHHH-TT--------T-SEEEEET--CCH
T ss_pred hcCHHHHHHHHHHHHHHHHHhhc-----CCCCCCEEEECCcchhHHHHHHHhhCCC--------eeEEEEeccceeee
Confidence 1457888888888885532 2244689999999999999999999999 5788888 655543
No 139
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.75 E-value=0.00013 Score=49.18 Aligned_cols=55 Identities=18% Similarity=0.077 Sum_probs=41.1
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH 129 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~ 129 (229)
.+.++.|.|+. .++.+|+++||-+...+ .|..++..|+. .|+.|+.+|+|+.+..
T Consensus 3 ~L~~~~w~p~~-------~~k~~v~i~HG~~eh~~-----ry~~~a~~L~~-~G~~V~~~D~rGhG~S 57 (79)
T PF12146_consen 3 KLFYRRWKPEN-------PPKAVVVIVHGFGEHSG-----RYAHLAEFLAE-QGYAVFAYDHRGHGRS 57 (79)
T ss_pred EEEEEEecCCC-------CCCEEEEEeCCcHHHHH-----HHHHHHHHHHh-CCCEEEEECCCcCCCC
Confidence 36677888874 25789999999654432 37778888875 6999999999986544
No 140
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.65 E-value=0.0003 Score=61.64 Aligned_cols=133 Identities=14% Similarity=0.160 Sum_probs=90.1
Q ss_pred ceEEeeEEEcCCCCEEEEEE-EeCCCCCCCCCCCccEEEEEcC-----CcccccCCCCcchHHHHHHHHhhCCcEEEEEe
Q 040311 49 VVLSKDVTVNQSKNTWVRIF-VPRQALDSPSSTKLPLIVDFHG-----GGFIFFSAASSLSHEFCSNVAVELPAIVVSVD 122 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~~~i~-~P~~~~~~~~~~~~pviv~iHG-----Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~d 122 (229)
++..++..+..+++.-+.+. .|... .++|+|++.|| ..|+....+ ..+..++..+||.|-.-|
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~~------~~rp~Vll~HGLl~sS~~Wv~n~p~-----~sLaf~LadaGYDVWLgN 113 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRGK------KKRPVVLLQHGLLASSSSWVLNGPE-----QSLAFLLADAGYDVWLGN 113 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCCC------CCCCcEEEeeccccccccceecCcc-----ccHHHHHHHcCCceeeec
Confidence 45567777777777544333 24432 68899999999 445433322 234555567899999999
Q ss_pred cCCC----------CC-CC----CC---chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhh
Q 040311 123 YRLA----------PE-HR----LP---AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQ 184 (229)
Q Consensus 123 yr~~----------~~-~~----~~---~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~ 184 (229)
-|+. +. .. |. -...|+-+.++++.+.- ..+++..+|||.|+.....++...++
T Consensus 114 ~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--------~~~kl~yvGHSQGtt~~fv~lS~~p~- 184 (403)
T KOG2624|consen 114 NRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--------GQEKLHYVGHSQGTTTFFVMLSERPE- 184 (403)
T ss_pred CcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--------cccceEEEEEEccchhheehhcccch-
Confidence 8863 11 11 11 13578899999988753 45799999999999988888877655
Q ss_pred cCCCCCcceeEEEe-ccccCCC
Q 040311 185 VNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 185 ~~~~~~~~v~g~il-~P~~~~~ 205 (229)
..-+|+..++ +|.....
T Consensus 185 ----~~~kI~~~~aLAP~~~~k 202 (403)
T KOG2624|consen 185 ----YNKKIKSFIALAPAAFPK 202 (403)
T ss_pred ----hhhhhheeeeecchhhhc
Confidence 1136888888 9987444
No 141
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.61 E-value=0.00015 Score=58.58 Aligned_cols=83 Identities=18% Similarity=0.140 Sum_probs=42.5
Q ss_pred EEEEcCCcccccCCCCcchHHHHHHHHhhCCcE---EEEEecCCCCCCCCCchH-------HHHHHHHHHHHHhcchhhh
Q 040311 85 IVDFHGGGFIFFSAASSLSHEFCSNVAVELPAI---VVSVDYRLAPEHRLPAAY-------DDAMDALHWIKNTQDDWLM 154 (229)
Q Consensus 85 iv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~---vv~~dyr~~~~~~~~~~~-------~D~~~a~~~l~~~~~~~~~ 154 (229)
|||+||-+ ......+..+...|. +.||. +++++|............ .++...++-+++.
T Consensus 4 VVlVHG~~----~~~~~~w~~~~~~l~-~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~------ 72 (219)
T PF01674_consen 4 VVLVHGTG----GNAYSNWSTLAPYLK-AAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAY------ 72 (219)
T ss_dssp EEEE--TT----TTTCGGCCHHHHHHH-HTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHH------
T ss_pred EEEECCCC----cchhhCHHHHHHHHH-HcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHh------
Confidence 79999943 112222455666665 56998 799999765432221111 2333333333221
Q ss_pred cCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 155 KHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 155 ~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
... +|-|+|||+||.++..+....
T Consensus 73 --TGa-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 73 --TGA-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp --HT---EEEEEETCHHHHHHHHHHHC
T ss_pred --hCC-EEEEEEcCCcCHHHHHHHHHc
Confidence 234 999999999999998887644
No 142
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.60 E-value=0.00059 Score=57.56 Aligned_cols=94 Identities=20% Similarity=0.123 Sum_probs=58.1
Q ss_pred HHHHHHHhhCCcEEEEEecCCCCCCCCCchHH---HHHHHHHHHHHhcchhhhcCCC-CCcEEEEecchhHHHHHHHHHH
Q 040311 105 EFCSNVAVELPAIVVSVDYRLAPEHRLPAAYD---DAMDALHWIKNTQDDWLMKHAD-FDNCFLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 105 ~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~---D~~~a~~~l~~~~~~~~~~~~d-~~ri~l~G~S~GG~la~~~a~~ 180 (229)
.++..++ +.||.|+++||-+-.. +|-.... .+..+++-.++.... .++. ..+++++|+|-||+-++.++..
T Consensus 17 ~~l~~~L-~~GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~~---~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 17 PFLAAWL-ARGYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPPK---LGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHH-HCCCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhcccc---cCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 3555555 5699999999975443 5543333 333333333332221 1333 3689999999999988777654
Q ss_pred hhhhcCCCCCcc--eeEEEe-ccccCCCC
Q 040311 181 ATAQVNNLLPLK--IKGLLL-FPFFGAIK 206 (229)
Q Consensus 181 ~~~~~~~~~~~~--v~g~il-~P~~~~~~ 206 (229)
.++ -.+.+. +.|.++ +|..+...
T Consensus 92 ~~~---YApeL~~~l~Gaa~gg~~~dl~~ 117 (290)
T PF03583_consen 92 APS---YAPELNRDLVGAAAGGPPADLAA 117 (290)
T ss_pred hHH---hCcccccceeEEeccCCccCHHH
Confidence 433 123345 899999 88876544
No 143
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.59 E-value=0.00048 Score=53.53 Aligned_cols=37 Identities=27% Similarity=0.222 Sum_probs=27.6
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
+.++|+|||+|+..++..+... ...+|+|++| +|+-.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~~~-------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLAEQ-------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHHHT-------CCSSEEEEEEES--SC
T ss_pred CCeEEEEeCHHHHHHHHHHhhc-------ccccccEEEEEcCCCc
Confidence 4699999999999999988521 2237999999 99953
No 144
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.59 E-value=0.00066 Score=56.11 Aligned_cols=59 Identities=24% Similarity=0.214 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccCC
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFGA 204 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~~ 204 (229)
..-+..++.+|+++. .-+++-++||||||..++.++..+.. . ..-+++..+|. +||-..
T Consensus 86 a~wl~~vl~~L~~~Y--------~~~~~N~VGHSmGg~~~~~yl~~~~~--~-~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 86 AKWLKKVLKYLKKKY--------HFKKFNLVGHSMGGLSWTYYLENYGN--D-KNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHHHCC----------SEEEEEEETHHHHHHHHHHHHCTT--G-TTS-EEEEEEEES--TTTT
T ss_pred HHHHHHHHHHHHHhc--------CCCEEeEEEECccHHHHHHHHHHhcc--C-CCCcccceEEEeccccCcc
Confidence 344556666666653 34799999999999999988888754 1 12236888887 666443
No 145
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.59 E-value=0.00076 Score=54.42 Aligned_cols=65 Identities=23% Similarity=0.261 Sum_probs=37.4
Q ss_pred HHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcC----CCCCcceeEEE-e-ccccCCCCCC
Q 040311 141 ALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVN----NLLPLKIKGLL-L-FPFFGAIKRT 208 (229)
Q Consensus 141 a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~----~~~~~~v~g~i-l-~P~~~~~~~~ 208 (229)
..+++.+..... .....+|.++|||+||-++-.+.....+... ......+...+ + +|.++.....
T Consensus 62 L~~eI~~~~~~~---~~~~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~~~ 132 (217)
T PF05057_consen 62 LAEEILEHIKDY---ESKIRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRYAS 132 (217)
T ss_pred HHHHHHHhcccc---ccccccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCcccc
Confidence 445555554331 2223689999999999988877765544211 11122344544 4 8887654443
No 146
>COG0627 Predicted esterase [General function prediction only]
Probab=97.58 E-value=0.00018 Score=61.18 Aligned_cols=130 Identities=15% Similarity=0.113 Sum_probs=69.2
Q ss_pred EEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecC-------------CCCCCCC
Q 040311 65 VRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYR-------------LAPEHRL 131 (229)
Q Consensus 65 ~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr-------------~~~~~~~ 131 (229)
+.+++|........+++.||++++||- .++.....-..-+++.+.+.|+.++.+|-. .+....|
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G~---t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sf 113 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSGL---TCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASF 113 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCCC---CCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccce
Confidence 455666543100123678999999992 222212112234566777889999887422 1111111
Q ss_pred CchHHH------HHHHHHHHHHhcc-hhhh-cCCCC--CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cc
Q 040311 132 PAAYDD------AMDALHWIKNTQD-DWLM-KHADF--DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FP 200 (229)
Q Consensus 132 ~~~~~D------~~~a~~~l~~~~~-~~~~-~~~d~--~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P 200 (229)
-..... ...-..|+.++.. .|.+ ...+. ++.++.||||||+-|+.+|++.++ +.+.+.. +|
T Consensus 114 Y~d~~~~~~~~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--------~f~~~sS~Sg 185 (316)
T COG0627 114 YSDWTQPPWASGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--------RFKSASSFSG 185 (316)
T ss_pred ecccccCccccCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--------hhceeccccc
Confidence 000000 0112223333322 1111 12344 389999999999999999999987 4555555 66
Q ss_pred ccCCC
Q 040311 201 FFGAI 205 (229)
Q Consensus 201 ~~~~~ 205 (229)
+++..
T Consensus 186 ~~~~s 190 (316)
T COG0627 186 ILSPS 190 (316)
T ss_pred ccccc
Confidence 65544
No 147
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.54 E-value=0.00075 Score=55.09 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=63.8
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCc--EEEEEecCCCCC-CCCCchH---HHHHHHHHHHHHhcchhh
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPA--IVVSVDYRLAPE-HRLPAAY---DDAMDALHWIKNTQDDWL 153 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~--~vv~~dyr~~~~-~~~~~~~---~D~~~a~~~l~~~~~~~~ 153 (229)
..+.++||+||..... .. -...+..+....++ .++.+.+..... ..|...- ......+..+.+....
T Consensus 16 ~~~~vlvfVHGyn~~f---~~--a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~-- 88 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSF---ED--ALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLAR-- 88 (233)
T ss_pred CCCeEEEEEeCCCCCH---HH--HHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHh--
Confidence 4678999999942221 11 11123334444444 677777665432 1122111 1112222222222111
Q ss_pred hcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCC-CCCcceeEEEe-ccccCCC
Q 040311 154 MKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNN-LLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 154 ~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~-~~~~~v~g~il-~P~~~~~ 205 (229)
.....+|.|++||||+.+.+.+.......... .....+..+++ +|=++..
T Consensus 89 --~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 89 --APGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred --ccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 22457999999999999999988776552221 11236888999 9887754
No 148
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.54 E-value=0.00039 Score=56.34 Aligned_cols=75 Identities=12% Similarity=-0.007 Sum_probs=53.2
Q ss_pred hHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhh
Q 040311 103 SHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 103 ~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
|+.+...+- ..+.++.++|.+-...--...+.|+....+-+....... .--...++.||||||.+|..+|.+..
T Consensus 23 fr~W~~~lp--~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~----~~d~P~alfGHSmGa~lAfEvArrl~ 96 (244)
T COG3208 23 FRSWSRRLP--ADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPP----LLDAPFALFGHSMGAMLAFEVARRLE 96 (244)
T ss_pred HHHHHhhCC--chhheeeecCCCcccccCCcccccHHHHHHHHHHHhccc----cCCCCeeecccchhHHHHHHHHHHHH
Confidence 555655443 248899999998765544555677777777666654310 11247999999999999999999997
Q ss_pred h
Q 040311 183 A 183 (229)
Q Consensus 183 ~ 183 (229)
.
T Consensus 97 ~ 97 (244)
T COG3208 97 R 97 (244)
T ss_pred H
Confidence 7
No 149
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.52 E-value=0.0025 Score=54.24 Aligned_cols=128 Identities=12% Similarity=0.094 Sum_probs=81.0
Q ss_pred EEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC-----C---
Q 040311 56 TVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA-----P--- 127 (229)
Q Consensus 56 ~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~-----~--- 127 (229)
.+..++.-.+-+|.|.... +.+.+||.+||-|.. ......-..++.-..+.|+..+++....- +
T Consensus 66 ~L~~~~~~flaL~~~~~~~-----~~~G~vIilp~~g~~---~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 66 WLQAGEERFLALWRPANSA-----KPQGAVIILPDWGEH---PDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred EeecCCEEEEEEEecccCC-----CCceEEEEecCCCCC---CCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 3334455566689888765 678899999995543 33322334555555678999999875540 0
Q ss_pred ----------CCCCC----------------------chHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHH
Q 040311 128 ----------EHRLP----------------------AAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAY 175 (229)
Q Consensus 128 ----------~~~~~----------------------~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~ 175 (229)
..... ..+.-+.+++.++.++. ..+|+|+||+.|+++++
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---------~~~ivlIg~G~gA~~~~ 208 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---------GKNIVLIGHGTGAGWAA 208 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---------CceEEEEEeChhHHHHH
Confidence 00000 11223344444444432 24599999999999999
Q ss_pred HHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 176 YAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 176 ~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
.+...... ..+.++|+ +|.......
T Consensus 209 ~~la~~~~-------~~~daLV~I~a~~p~~~~ 234 (310)
T PF12048_consen 209 RYLAEKPP-------PMPDALVLINAYWPQPDR 234 (310)
T ss_pred HHHhcCCC-------cccCeEEEEeCCCCcchh
Confidence 98877654 34789999 888765554
No 150
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.45 E-value=0.00025 Score=57.02 Aligned_cols=63 Identities=13% Similarity=0.048 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
..++..+++++.+...+. + .-.+|+|+|.||.+|+.++.............+++.+|+ +++..
T Consensus 83 ~~~~~~sl~~l~~~i~~~---G---PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEEN---G---PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp G---HHHHHHHHHHHHHH---------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred ccCHHHHHHHHHHHHHhc---C---CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 466777788887766552 1 257899999999999999976654222113345778888 76654
No 151
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.45 E-value=0.0015 Score=55.87 Aligned_cols=115 Identities=15% Similarity=0.108 Sum_probs=68.5
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcE--EEEEecCCCC---CCCCC-----chHHHHHHHHHHHHHhc
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAI--VVSVDYRLAP---EHRLP-----AAYDDAMDALHWIKNTQ 149 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~--vv~~dyr~~~---~~~~~-----~~~~D~~~a~~~l~~~~ 149 (229)
..+-++||+||-.+.... -..-...++...|+. .|.+.+.... .+.+. ..-.+.+..+++|.+..
T Consensus 114 ~~k~vlvFvHGfNntf~d-----av~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTFED-----AVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCchhH-----HHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC
Confidence 456799999995443211 111234455555643 4444433221 12222 22355666677776653
Q ss_pred chhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 150 DDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 150 ~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
...+|.|+.||||..+++....+..-....-.+.+++-+|+ +|=.|....
T Consensus 189 --------~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF 239 (377)
T COG4782 189 --------PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVF 239 (377)
T ss_pred --------CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhH
Confidence 23699999999999999999887754212213457888999 998775543
No 152
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.37 E-value=0.002 Score=52.53 Aligned_cols=92 Identities=16% Similarity=0.205 Sum_probs=60.3
Q ss_pred EEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC--CchHHHHHHHHHHHHHhcchhhhcCCCC--
Q 040311 84 LIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL--PAAYDDAMDALHWIKNTQDDWLMKHADF-- 159 (229)
Q Consensus 84 viv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~--~~~~~D~~~a~~~l~~~~~~~~~~~~d~-- 159 (229)
.||.|=||+|.. ......|+.++..++. .||.|++.-|...=++.. .........+++.+.+.. +.++
T Consensus 18 gvihFiGGaf~g-a~P~itYr~lLe~La~-~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~------~~~~~~ 89 (250)
T PF07082_consen 18 GVIHFIGGAFVG-AAPQITYRYLLERLAD-RGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRG------GLDPAY 89 (250)
T ss_pred EEEEEcCcceec-cCcHHHHHHHHHHHHh-CCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhc------CCCccc
Confidence 688888998864 4555668889999986 599999999865432211 011233333444444432 2232
Q ss_pred CcEEEEecchhHHHHHHHHHHhhh
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
-.++=+|||+|+-+-+.+...+..
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~~~ 113 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLFDV 113 (250)
T ss_pred CCeeeeecccchHHHHHHhhhccC
Confidence 257789999999998888876643
No 153
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.36 E-value=0.00042 Score=55.77 Aligned_cols=70 Identities=24% Similarity=0.243 Sum_probs=51.3
Q ss_pred hHHHHHHHHhhCCcEEEEEecCCCCCCCC-----------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhH
Q 040311 103 SHEFCSNVAVELPAIVVSVDYRLAPEHRL-----------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGG 171 (229)
Q Consensus 103 ~~~~~~~~~~~~g~~vv~~dyr~~~~~~~-----------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG 171 (229)
|+.++.. +.+.|+.|+.+|||+..+..- .....|..++++++++...+ ...+.+|||+||
T Consensus 46 YRrfA~~-a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~--------~P~y~vgHS~GG 116 (281)
T COG4757 46 YRRFAAA-AAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPG--------HPLYFVGHSFGG 116 (281)
T ss_pred hHHHHHH-hhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCC--------CceEEeeccccc
Confidence 4555544 457799999999998654321 23458899999999987644 478899999999
Q ss_pred HHHHHHHHHh
Q 040311 172 NIAYYAGLRA 181 (229)
Q Consensus 172 ~la~~~a~~~ 181 (229)
++...++.+.
T Consensus 117 qa~gL~~~~~ 126 (281)
T COG4757 117 QALGLLGQHP 126 (281)
T ss_pred eeecccccCc
Confidence 9776666543
No 154
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.29 E-value=0.0059 Score=53.67 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCC--CCcceeEEEe-ccccCCCCCChhh
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNL--LPLKIKGLLL-FPFFGAIKRTTSE 211 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~--~~~~v~g~il-~P~~~~~~~~~~~ 211 (229)
-+++...+++|++-..++ ......+++|+|+|.||+.+..+|.+..+..... ....++|+++ .|+++......++
T Consensus 113 ~~~a~~~~~fl~~f~~~~--p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~ 190 (415)
T PF00450_consen 113 DQAAEDLYEFLQQFFQKF--PEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNSY 190 (415)
T ss_dssp HHHHHHHHHHHHHHHHHS--GGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhh--hhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccccccceee
Confidence 344444445444433322 1234568999999999999999998876532221 3678999999 9999875544443
No 155
>PRK04940 hypothetical protein; Provisional
Probab=97.28 E-value=0.0023 Score=49.90 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=28.9
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEeccccCCC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLLFPFFGAI 205 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il~P~~~~~ 205 (229)
+++.|+|+|+||.-|..++.++. +++|++.|.+...
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g----------~~aVLiNPAv~P~ 95 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG----------IRQVIFNPNLFPE 95 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC----------CCEEEECCCCChH
Confidence 46999999999999999999874 5677776666543
No 156
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.24 E-value=0.003 Score=52.21 Aligned_cols=95 Identities=22% Similarity=0.210 Sum_probs=58.6
Q ss_pred cEEEEEcC-CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCC-CCCCchHHHHHHH-HHHHHHhcchhhhcCCCC
Q 040311 83 PLIVDFHG-GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPE-HRLPAAYDDAMDA-LHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 83 pviv~iHG-Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~-~~~~~~~~D~~~a-~~~l~~~~~~~~~~~~d~ 159 (229)
|.+++||+ +|+. .. |..+...+.. -..|+.+++++... ......++|..+. ++-+++.-. .
T Consensus 1 ~pLF~fhp~~G~~----~~--~~~L~~~l~~--~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP--------~ 64 (257)
T COG3319 1 PPLFCFHPAGGSV----LA--YAPLAAALGP--LLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQP--------E 64 (257)
T ss_pred CCEEEEcCCCCcH----HH--HHHHHHHhcc--CceeeccccCcccccccccCCHHHHHHHHHHHHHHhCC--------C
Confidence 46899998 3332 11 4445554432 37788888886531 1222334444433 333443322 2
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
..+.|.|+|+||.+|..+|.+... ....|+.+++
T Consensus 65 GPy~L~G~S~GG~vA~evA~qL~~-----~G~~Va~L~l 98 (257)
T COG3319 65 GPYVLLGWSLGGAVAFEVAAQLEA-----QGEEVAFLGL 98 (257)
T ss_pred CCEEEEeeccccHHHHHHHHHHHh-----CCCeEEEEEE
Confidence 589999999999999999999876 3345777777
No 157
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.17 E-value=0.0013 Score=52.57 Aligned_cols=107 Identities=20% Similarity=0.078 Sum_probs=72.3
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC----CCCCCchHHHHHHHHHHHHHhcchhhhcCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP----EHRLPAAYDDAMDALHWIKNTQDDWLMKHA 157 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~----~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~ 157 (229)
+-.|||+-|=| -| .-...|...+...+.+.++..|.+..+.+. ........+|+..+++++... +.
T Consensus 36 ~~~vvfiGGLg--dg-Ll~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~-------~f 105 (299)
T KOG4840|consen 36 SVKVVFIGGLG--DG-LLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLC-------GF 105 (299)
T ss_pred EEEEEEEcccC--CC-ccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhcc-------Cc
Confidence 34567776511 11 112236667777778889999999877553 344556678888888866543 22
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCC
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAI 205 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~ 205 (229)
.+.|+|+|||-|+.-.+++...... +..|.+.|+ +|+-|-+
T Consensus 106 -St~vVL~GhSTGcQdi~yYlTnt~~------~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 106 -STDVVLVGHSTGCQDIMYYLTNTTK------DRKIRAAILQAPVSDRE 147 (299)
T ss_pred -ccceEEEecCccchHHHHHHHhccc------hHHHHHHHHhCccchhh
Confidence 3599999999999988887744322 236888889 9997755
No 158
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.11 E-value=0.0033 Score=54.62 Aligned_cols=134 Identities=20% Similarity=0.205 Sum_probs=85.0
Q ss_pred EEcCCCCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcc-hHHHHHHHHhhCCcEEEEEecCCCCCC-CC--
Q 040311 56 TVNQSKNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSL-SHEFCSNVAVELPAIVVSVDYRLAPEH-RL-- 131 (229)
Q Consensus 56 ~~~~~~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~-~~~~~~~~~~~~g~~vv~~dyr~~~~~-~~-- 131 (229)
.+.+......|..+....= .+++.| |+|.-|. -|+.+.+. ...++..++.+.+..+|.+++|..++. +|
T Consensus 58 sF~~~~tF~qRylin~~fw---~~g~gP-IffYtGN---EGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~ 130 (492)
T KOG2183|consen 58 SFTDNKTFDQRYLINDDFW---KKGEGP-IFFYTGN---EGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGS 130 (492)
T ss_pred cccCccceeeEEEEecccc---cCCCCc-eEEEeCC---cccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcc
Confidence 3444444555555554332 112244 5555562 12222211 123677788888999999999964321 11
Q ss_pred --------------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEE
Q 040311 132 --------------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLL 197 (229)
Q Consensus 132 --------------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~i 197 (229)
...+.|-...+.++++.. +.....|++.|.|.||.+|+++=+++|. .+.|.+
T Consensus 131 ~s~k~~~hlgyLtseQALADfA~ll~~lK~~~------~a~~~pvIafGGSYGGMLaAWfRlKYPH--------iv~GAl 196 (492)
T KOG2183|consen 131 QSYKDARHLGYLTSEQALADFAELLTFLKRDL------SAEASPVIAFGGSYGGMLAAWFRLKYPH--------IVLGAL 196 (492)
T ss_pred hhccChhhhccccHHHHHHHHHHHHHHHhhcc------ccccCcEEEecCchhhHHHHHHHhcChh--------hhhhhh
Confidence 234678888888888764 4556789999999999999999999998 456665
Q ss_pred e--ccccCCCCCChh
Q 040311 198 L--FPFFGAIKRTTS 210 (229)
Q Consensus 198 l--~P~~~~~~~~~~ 210 (229)
+ +|.+..++..+.
T Consensus 197 AaSAPvl~f~d~vp~ 211 (492)
T KOG2183|consen 197 AASAPVLYFEDTVPK 211 (492)
T ss_pred hccCceEeecCCCCc
Confidence 5 788766655443
No 159
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.09 E-value=0.002 Score=51.34 Aligned_cols=81 Identities=20% Similarity=0.157 Sum_probs=55.6
Q ss_pred CcEEEEEecCCCCCCCC------------CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhh
Q 040311 115 PAIVVSVDYRLAPEHRL------------PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 115 g~~vv~~dyr~~~~~~~------------~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
-+.|+++-||...-..+ .-...|+.+|.++-.++... -..++|+|||.|+.+...+....-
T Consensus 45 ~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~-------GRPfILaGHSQGs~~l~~LL~e~~ 117 (207)
T PF11288_consen 45 VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNN-------GRPFILAGHSQGSMHLLRLLKEEI 117 (207)
T ss_pred CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCC-------CCCEEEEEeChHHHHHHHHHHHHh
Confidence 46899999996432111 23468999999887776432 157999999999999999988764
Q ss_pred hhcCCCCCcceeEEEe-ccccC
Q 040311 183 AQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 183 ~~~~~~~~~~v~g~il-~P~~~ 203 (229)
+... +....|++.++ .+...
T Consensus 118 ~~~p-l~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 118 AGDP-LRKRLVAAYLIGYPVTV 138 (207)
T ss_pred cCch-HHhhhheeeecCccccH
Confidence 4222 33445666666 66654
No 160
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.07 E-value=0.0034 Score=46.47 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=30.4
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
..+|.+.|||+||.+|..++.......... ...+..+.. +|.+.
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~-~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSS-SSNVKCYTFGAPRVG 107 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTS-TTTEEEEEES-S--B
T ss_pred CccchhhccchHHHHHHHHHHhhhhccccc-ccceeeeecCCcccc
Confidence 379999999999999999999887622111 245667777 77763
No 161
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.05 E-value=0.025 Score=49.42 Aligned_cols=56 Identities=23% Similarity=0.160 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
..|...|+.++.++... ..+.-+++++|+|-||.+|..+|.-.|. -+.+++= |.+.
T Consensus 163 AiD~INAl~~l~k~~~~----~~~~lp~I~~G~s~G~yla~l~~k~aP~--------~~~~~iDns~~~ 219 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPK----NGGGLPKIYIGSSHGGYLAHLCAKIAPW--------LFDGVIDNSSYA 219 (403)
T ss_pred HHHHHHHHHHHHHhhhc----ccCCCcEEEEecCcHHHHHHHHHhhCcc--------ceeEEEecCccc
Confidence 36788888888888654 2234589999999999999999877666 5777776 6664
No 162
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.98 E-value=0.0024 Score=56.83 Aligned_cols=87 Identities=14% Similarity=0.072 Sum_probs=51.0
Q ss_pred hHHHHHHHHhhCCcEEEEEecCCCCCCC-----CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHH
Q 040311 103 SHEFCSNVAVELPAIVVSVDYRLAPEHR-----LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYA 177 (229)
Q Consensus 103 ~~~~~~~~~~~~g~~vv~~dyr~~~~~~-----~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~ 177 (229)
|..+...+. +.|+.+ ..|.++.+-.- ....+++....++.+.+.. ...++.|+||||||.++..+
T Consensus 110 ~~~li~~L~-~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~--------g~~kV~LVGHSMGGlva~~f 179 (440)
T PLN02733 110 FHDMIEQLI-KWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKAS--------GGKKVNIISHSMGGLLVKCF 179 (440)
T ss_pred HHHHHHHHH-HcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHc--------CCCCEEEEEECHhHHHHHHH
Confidence 455666665 568754 45555443211 1122344444444444332 23689999999999999998
Q ss_pred HHHhhhhcCCCCCcceeEEEe--ccccC
Q 040311 178 GLRATAQVNNLLPLKIKGLLL--FPFFG 203 (229)
Q Consensus 178 a~~~~~~~~~~~~~~v~g~il--~P~~~ 203 (229)
+...++.. ...|+.+|+ +|+.+
T Consensus 180 l~~~p~~~----~k~I~~~I~la~P~~G 203 (440)
T PLN02733 180 MSLHSDVF----EKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHCCHhH----HhHhccEEEECCCCCC
Confidence 88765511 124778887 45443
No 163
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.94 E-value=0.0021 Score=52.15 Aligned_cols=56 Identities=25% Similarity=0.357 Sum_probs=40.0
Q ss_pred HHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccCC
Q 040311 139 MDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFGA 204 (229)
Q Consensus 139 ~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~~ 204 (229)
..|++++.+.... .+.+|.+.|||.||++|.+++....+ ....+|..++. +|-+..
T Consensus 69 ~~A~~yl~~~~~~------~~~~i~v~GHSkGGnLA~yaa~~~~~----~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 69 KSALAYLKKIAKK------YPGKIYVTGHSKGGNLAQYAAANCDD----EIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred HHHHHHHHHHHHh------CCCCEEEEEechhhHHHHHHHHHccH----HHhhheeEEEEeeCCCCCh
Confidence 5667777766543 22469999999999999999998544 11235778876 887754
No 164
>PLN02209 serine carboxypeptidase
Probab=96.84 E-value=0.0099 Score=53.01 Aligned_cols=54 Identities=15% Similarity=0.116 Sum_probs=39.3
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcC--CCCCcceeEEEe-ccccCCCCCChhh
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVN--NLLPLKIKGLLL-FPFFGAIKRTTSE 211 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~--~~~~~~v~g~il-~P~~~~~~~~~~~ 211 (229)
..+.++|+|+|.||+-+-.+|....+... ......++|+++ .|+++......++
T Consensus 165 ~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~ 221 (437)
T PLN02209 165 LSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFR 221 (437)
T ss_pred cCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhH
Confidence 44689999999999988888877654211 123567899999 9999865554444
No 165
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.80 E-value=0.03 Score=44.72 Aligned_cols=109 Identities=17% Similarity=0.161 Sum_probs=64.0
Q ss_pred CCccEEEEEcCCcccccCC-----------CCcchHHHHHHHHhhCCcEEEEEecCC---------CCCCCCCchHHHHH
Q 040311 80 TKLPLIVDFHGGGFIFFSA-----------ASSLSHEFCSNVAVELPAIVVSVDYRL---------APEHRLPAAYDDAM 139 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~-----------~~~~~~~~~~~~~~~~g~~vv~~dyr~---------~~~~~~~~~~~D~~ 139 (229)
.+..++|+|||.|.+.... +....-.+.++. .+.||-|+..|--. .|........+-+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rA-v~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRA-VAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHH-HHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH
Confidence 5667999999977653221 111111234333 34577777766221 11111223334433
Q ss_pred HHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccC
Q 040311 140 DALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFG 203 (229)
Q Consensus 140 ~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~ 203 (229)
.+...+.. ...+..|+++-||.||.+.+.+..+.+++ .+|.++.+ +++-.
T Consensus 178 yvw~~~v~--------pa~~~sv~vvahsyGG~~t~~l~~~f~~d------~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 178 YVWKNIVL--------PAKAESVFVVAHSYGGSLTLDLVERFPDD------ESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHHhc--------ccCcceEEEEEeccCChhHHHHHHhcCCc------cceEEEEeecccccC
Confidence 33333332 34568999999999999999999998772 36788888 77533
No 166
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.78 E-value=0.049 Score=48.59 Aligned_cols=54 Identities=15% Similarity=0.092 Sum_probs=39.4
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcC--CCCCcceeEEEe-ccccCCCCCChhh
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVN--NLLPLKIKGLLL-FPFFGAIKRTTSE 211 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~--~~~~~~v~g~il-~P~~~~~~~~~~~ 211 (229)
..++++|.|+|.||+.+-.+|.+..+... ......++|+++ .|+++......++
T Consensus 163 ~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~ 219 (433)
T PLN03016 163 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFR 219 (433)
T ss_pred cCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhH
Confidence 44679999999999988888887654211 123567899999 9998776544443
No 167
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.77 E-value=0.016 Score=47.32 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--cccc
Q 040311 136 DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFF 202 (229)
Q Consensus 136 ~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~ 202 (229)
.-...++.+|.++. +-.++-++||||||.-...++..+..+ ..-+++..+|. +||-
T Consensus 120 ~wlk~~msyL~~~Y--------~i~k~n~VGhSmGg~~~~~Y~~~yg~d---ks~P~lnK~V~l~gpfN 177 (288)
T COG4814 120 KWLKKAMSYLQKHY--------NIPKFNAVGHSMGGLGLTYYMIDYGDD---KSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHhc--------CCceeeeeeeccccHHHHHHHHHhcCC---CCCcchhheEEeccccc
Confidence 44455666666653 456899999999999888888888652 22235667776 6665
No 168
>PLN02454 triacylglycerol lipase
Probab=96.73 E-value=0.0061 Score=53.46 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=32.4
Q ss_pred cEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 161 NCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
+|++.|||+||+||+.+|.............+|..+.. +|-+..
T Consensus 229 sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 59999999999999999988765322212335777777 888653
No 169
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.70 E-value=0.013 Score=52.01 Aligned_cols=115 Identities=21% Similarity=0.138 Sum_probs=70.0
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEE-ecCCCCCCCCCchHHHHHHH-HHHHHHhcchhhhcCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSV-DYRLAPEHRLPAAYDDAMDA-LHWIKNTQDDWLMKHA 157 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~-dyr~~~~~~~~~~~~D~~~a-~~~l~~~~~~~~~~~~ 157 (229)
-+.|+.||+-|- . ..+++..+ .+..+.|+..+.+ |-|+-+++-+-. -++.+.. ++-+++..+. ++.
T Consensus 287 ~KPPL~VYFSGy--R----~aEGFEgy--~MMk~Lg~PfLL~~DpRleGGaFYlG-s~eyE~~I~~~I~~~L~~---LgF 354 (511)
T TIGR03712 287 FKPPLNVYFSGY--R----PAEGFEGY--FMMKRLGAPFLLIGDPRLEGGAFYLG-SDEYEQGIINVIQEKLDY---LGF 354 (511)
T ss_pred CCCCeEEeeccC--c----ccCcchhH--HHHHhcCCCeEEeeccccccceeeeC-cHHHHHHHHHHHHHHHHH---hCC
Confidence 477999999882 1 12222222 1224567765554 667654433221 1222222 2222233333 489
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCCChhhhhccC
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKRTTSELRLVN 216 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~~~~~~~~~~ 216 (229)
+.+.++|.|-|||-.-|+..+++. .++|+|+ =|.+++.+-+.......+
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l----------~P~AIiVgKPL~NLGtiA~n~rL~RP 404 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKL----------SPHAIIVGKPLVNLGTIASRMRLDRP 404 (511)
T ss_pred CHHHeeeccccccchhhhhhcccC----------CCceEEEcCcccchhhhhccccccCC
Confidence 999999999999999999998665 4679999 999988776655544433
No 170
>COG3150 Predicted esterase [General function prediction only]
Probab=96.67 E-value=0.0067 Score=46.50 Aligned_cols=21 Identities=33% Similarity=0.586 Sum_probs=19.3
Q ss_pred cEEEEecchhHHHHHHHHHHh
Q 040311 161 NCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~ 181 (229)
+..|+|.|.||..|..++.+.
T Consensus 60 ~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 60 SPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred CceEEeecchHHHHHHHHHHh
Confidence 499999999999999999876
No 171
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.66 E-value=0.1 Score=42.74 Aligned_cols=106 Identities=21% Similarity=0.264 Sum_probs=64.5
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCC-----cEEEEEecCCCC-------CCCCC---chHHHHHHHHHH
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELP-----AIVVSVDYRLAP-------EHRLP---AAYDDAMDALHW 144 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g-----~~vv~~dyr~~~-------~~~~~---~~~~D~~~a~~~ 144 (229)
+.++.|+++.|..-. ...|..+++.+....+ +.+-..+..+.| ++.-. ..-+++..-+++
T Consensus 27 ~~~~li~~IpGNPG~-----~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGL-----LGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCceEEEEecCCCCc-----hhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHH
Confidence 678999999994221 1226778888776655 223333333333 11100 122455666788
Q ss_pred HHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 145 IKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 145 l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
+.+...+ -.+|+++|||-|+.+.+.+...... ...|..+++ .|-+-
T Consensus 102 ik~~~Pk-------~~ki~iiGHSiGaYm~Lqil~~~k~------~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 102 IKEYVPK-------DRKIYIIGHSIGAYMVLQILPSIKL------VFSVQKAVLLFPTIE 148 (301)
T ss_pred HHHhCCC-------CCEEEEEecchhHHHHHHHhhhccc------ccceEEEEEecchHH
Confidence 8776543 2689999999999999998875433 234555666 77653
No 172
>PF03283 PAE: Pectinacetylesterase
Probab=96.60 E-value=0.023 Score=49.43 Aligned_cols=44 Identities=20% Similarity=0.142 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
......++++|+..+. --++++|+|.|.||||.-++..+-...+
T Consensus 136 G~~i~~avl~~l~~~g------l~~a~~vlltG~SAGG~g~~~~~d~~~~ 179 (361)
T PF03283_consen 136 GYRILRAVLDDLLSNG------LPNAKQVLLTGCSAGGLGAILHADYVRD 179 (361)
T ss_pred cHHHHHHHHHHHHHhc------CcccceEEEeccChHHHHHHHHHHHHHH
Confidence 3577888999999872 1356899999999999888887766655
No 173
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.60 E-value=0.0084 Score=45.34 Aligned_cols=26 Identities=31% Similarity=0.336 Sum_probs=23.2
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
...+|.+.|||+||++|..++.+...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 45799999999999999999998865
No 174
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.57 E-value=0.042 Score=49.04 Aligned_cols=59 Identities=8% Similarity=0.076 Sum_probs=45.1
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhcC--CCCCcceeEEEe-ccccCCCCCChhhhhcc
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQVN--NLLPLKIKGLLL-FPFFGAIKRTTSELRLV 215 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~~--~~~~~~v~g~il-~P~~~~~~~~~~~~~~~ 215 (229)
...+.++|.|+|.+|+-+-.+|...-+..+ ......++|+++ .|+++..........+.
T Consensus 165 y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a 226 (454)
T KOG1282|consen 165 YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFA 226 (454)
T ss_pred hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhh
Confidence 355789999999999999888887766322 234567899999 99998877766665554
No 175
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.51 E-value=0.0081 Score=52.81 Aligned_cols=91 Identities=21% Similarity=0.229 Sum_probs=55.8
Q ss_pred hHHHHHHHHhhCCcE----EE--EEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHH
Q 040311 103 SHEFCSNVAVELPAI----VV--SVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYY 176 (229)
Q Consensus 103 ~~~~~~~~~~~~g~~----vv--~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~ 176 (229)
|..++..|. +.||. ++ -.|+|+++. .....+......++.+.+. .-++|+|+||||||.++..
T Consensus 67 ~~~li~~L~-~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~---------~~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 67 FAKLIENLE-KLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKK---------NGKKVVLIAHSMGGLVARY 135 (389)
T ss_pred HHHHHHHHH-hcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHh---------cCCcEEEEEeCCCchHHHH
Confidence 667777775 44652 23 368999886 2222334444444444332 2479999999999999999
Q ss_pred HHHHhhhhcCCCCCcceeEEEe--ccccCCCC
Q 040311 177 AGLRATAQVNNLLPLKIKGLLL--FPFFGAIK 206 (229)
Q Consensus 177 ~a~~~~~~~~~~~~~~v~g~il--~P~~~~~~ 206 (229)
+.....+ .......|+++|. .|+.....
T Consensus 136 fl~~~~~--~~W~~~~i~~~i~i~~p~~Gs~~ 165 (389)
T PF02450_consen 136 FLQWMPQ--EEWKDKYIKRFISIGTPFGGSPK 165 (389)
T ss_pred HHHhccc--hhhHHhhhhEEEEeCCCCCCChH
Confidence 8887754 1111235888888 55554333
No 176
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=96.50 E-value=0.019 Score=51.84 Aligned_cols=123 Identities=15% Similarity=0.154 Sum_probs=78.7
Q ss_pred CEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC-----CC---c
Q 040311 62 NTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR-----LP---A 133 (229)
Q Consensus 62 ~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~-----~~---~ 133 (229)
.+.+.+++|.+.. + .++.+=||||..+-......... ..+...||.+++-|-....... +- +
T Consensus 16 ~i~fev~LP~~WN-----g---R~~~~GgGG~~G~i~~~~~~~~~--~~~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~ 85 (474)
T PF07519_consen 16 NIRFEVWLPDNWN-----G---RFLQVGGGGFAGGINYADGKASM--ATALARGYATASTDSGHQGSAGSDDASFGNNPE 85 (474)
T ss_pred eEEEEEECChhhc-----c---CeEEECCCeeeCccccccccccc--chhhhcCeEEEEecCCCCCCcccccccccCCHH
Confidence 6888999999764 2 37777788886433222111111 2233579999999855432211 11 1
Q ss_pred hH--------HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 134 AY--------DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 134 ~~--------~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
.+ .+...+-+.|.+. + ++-.+++-+..|.|-||.-++..|+++|+ ...|+++ +|.++.
T Consensus 86 ~~~dfa~ra~h~~~~~aK~l~~~---~--Yg~~p~~sY~~GcS~GGRqgl~~AQryP~--------dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 86 ALLDFAYRALHETTVVAKALIEA---F--YGKAPKYSYFSGCSTGGRQGLMAAQRYPE--------DFDGILAGAPAINW 152 (474)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHH---H--hCCCCCceEEEEeCCCcchHHHHHHhChh--------hcCeEEeCCchHHH
Confidence 11 2222222222222 2 46788999999999999999999999999 5889999 999876
Q ss_pred CCC
Q 040311 205 IKR 207 (229)
Q Consensus 205 ~~~ 207 (229)
...
T Consensus 153 ~~~ 155 (474)
T PF07519_consen 153 THL 155 (474)
T ss_pred HHH
Confidence 543
No 177
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.49 E-value=0.013 Score=58.83 Aligned_cols=101 Identities=17% Similarity=0.077 Sum_probs=60.1
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-CCCchHHHHHHHHHHHHHhcchhhhcCCCCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-RLPAAYDDAMDALHWIKNTQDDWLMKHADFD 160 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ 160 (229)
.|.++++||.|-. . ..|..+...+. .++.|+.++.++.... .....+++....+....+.. . ...
T Consensus 1068 ~~~l~~lh~~~g~---~--~~~~~l~~~l~--~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~------~-~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGF---A--WQFSVLSRYLD--PQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ------Q-PHG 1133 (1296)
T ss_pred CCCeEEecCCCCc---h--HHHHHHHHhcC--CCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh------C-CCC
Confidence 3568999995421 1 12555555553 3688999988765322 12233444433332222211 1 124
Q ss_pred cEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 161 NCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
++.++|||+||.+|..+|.+..+ .+..+..+++ .++
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~-----~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRA-----RGEEVAFLGLLDTW 1170 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHH-----cCCceeEEEEecCC
Confidence 79999999999999999998755 2235777777 543
No 178
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.49 E-value=0.011 Score=47.91 Aligned_cols=42 Identities=19% Similarity=0.164 Sum_probs=32.2
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
..+|.+.|||+||++|..++....... ....+..+.. +|-..
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~---~~~~i~~~tFg~P~vg 169 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRG---PGSDVTVYTFGQPRVG 169 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhC---CCCceEEEEeCCCCCC
Confidence 368999999999999999999876511 2335777777 87764
No 179
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.37 E-value=0.013 Score=50.52 Aligned_cols=105 Identities=13% Similarity=0.018 Sum_probs=60.6
Q ss_pred cEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcE---EEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 83 PLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAI---VVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 83 pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~---vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
-.+|++||++...+.. ..+... ....|+. +..+++... ... ...........+++.+.... ...
T Consensus 60 ~pivlVhG~~~~~~~~-----~~~~~~-~~~~g~~~~~~~~~~~~~~-~~~-~~~~~~~~ql~~~V~~~l~~-----~ga 126 (336)
T COG1075 60 EPIVLVHGLGGGYGNF-----LPLDYR-LAILGWLTNGVYAFELSGG-DGT-YSLAVRGEQLFAYVDEVLAK-----TGA 126 (336)
T ss_pred ceEEEEccCcCCcchh-----hhhhhh-hcchHHHhccccccccccc-CCC-ccccccHHHHHHHHHHHHhh-----cCC
Confidence 3699999965443332 222222 2334555 666666643 111 12223344445555554432 234
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIK 206 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~ 206 (229)
.++.|+|||+||-++..++..... . ..|+.++. ++.=.++.
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~--~----~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGG--A----NRVASVVTLGTPHHGTE 168 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCc--c----ceEEEEEEeccCCCCch
Confidence 789999999999999988877764 1 25778877 55543333
No 180
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=96.37 E-value=0.091 Score=42.98 Aligned_cols=121 Identities=13% Similarity=0.153 Sum_probs=67.0
Q ss_pred eEEEcCCCCEEEEEEE--eCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCC----CC
Q 040311 54 DVTVNQSKNTWVRIFV--PRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRL----AP 127 (229)
Q Consensus 54 ~v~~~~~~~~~~~i~~--P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~----~~ 127 (229)
+..+.-+++..+++|- |+.. ...+.++||...|.|-. ...+..++..++ .+|+.|+.+|--. +.
T Consensus 4 dhvi~~~~~~~I~vwet~P~~~----~~~~~~tiliA~Gf~rr-----mdh~agLA~YL~-~NGFhViRyDsl~HvGlSs 73 (294)
T PF02273_consen 4 DHVIRLEDGRQIRVWETRPKNN----EPKRNNTILIAPGFARR-----MDHFAGLAEYLS-ANGFHVIRYDSLNHVGLSS 73 (294)
T ss_dssp EEEEEETTTEEEEEEEE---TT----S---S-EEEEE-TT-GG-----GGGGHHHHHHHH-TTT--EEEE---B------
T ss_pred cceeEcCCCCEEEEeccCCCCC----CcccCCeEEEecchhHH-----HHHHHHHHHHHh-hCCeEEEeccccccccCCC
Confidence 3344455677777775 4433 23566899999995443 223555666665 5799999998442 11
Q ss_pred ----CCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 128 ----EHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 128 ----~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+.+......|...+++|+.+.. ..++.|+-.|.-|-+|...+.+. + +.-+|. -+..
T Consensus 74 G~I~eftms~g~~sL~~V~dwl~~~g---------~~~~GLIAaSLSaRIAy~Va~~i-~---------lsfLitaVGVV 134 (294)
T PF02273_consen 74 GDINEFTMSIGKASLLTVIDWLATRG---------IRRIGLIAASLSARIAYEVAADI-N---------LSFLITAVGVV 134 (294)
T ss_dssp -------HHHHHHHHHHHHHHHHHTT------------EEEEEETTHHHHHHHHTTTS------------SEEEEES--S
T ss_pred CChhhcchHHhHHHHHHHHHHHHhcC---------CCcchhhhhhhhHHHHHHHhhcc-C---------cceEEEEeeee
Confidence 2222345688999999999653 35799999999999999988643 2 556666 5555
Q ss_pred C
Q 040311 203 G 203 (229)
Q Consensus 203 ~ 203 (229)
+
T Consensus 135 n 135 (294)
T PF02273_consen 135 N 135 (294)
T ss_dssp -
T ss_pred e
Confidence 4
No 181
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.17 E-value=0.015 Score=46.67 Aligned_cols=81 Identities=21% Similarity=0.331 Sum_probs=58.0
Q ss_pred HHHHHHHHhhCCcEEEEEecCCC----CC------------CCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEec
Q 040311 104 HEFCSNVAVELPAIVVSVDYRLA----PE------------HRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGS 167 (229)
Q Consensus 104 ~~~~~~~~~~~g~~vv~~dyr~~----~~------------~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~ 167 (229)
+..+..++. .||.|+.+||-.+ ++ +..+....|+...++|++.+ .+..+|+++|.
T Consensus 57 r~~Adk~A~-~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~--------g~~kkIGv~Gf 127 (242)
T KOG3043|consen 57 REGADKVAL-NGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNH--------GDSKKIGVVGF 127 (242)
T ss_pred HHHHHHHhc-CCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHc--------CCcceeeEEEE
Confidence 345666665 4999999995433 22 23345578999999999964 35589999999
Q ss_pred chhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 168 SAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 168 S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
..||.++..+....+. +.+++. +|-+
T Consensus 128 CwGak~vv~~~~~~~~---------f~a~v~~hps~ 154 (242)
T KOG3043|consen 128 CWGAKVVVTLSAKDPE---------FDAGVSFHPSF 154 (242)
T ss_pred eecceEEEEeeccchh---------heeeeEecCCc
Confidence 9999988887766554 556666 6554
No 182
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.17 E-value=0.12 Score=40.34 Aligned_cols=109 Identities=15% Similarity=0.083 Sum_probs=51.4
Q ss_pred EEEEEcCCcccccCCCCcchHHHHHHHHhhCC---cEEEEEecCCCCCC-CCCchHHHHHH-HHHHHHHhcchhhhcCCC
Q 040311 84 LIVDFHGGGFIFFSAASSLSHEFCSNVAVELP---AIVVSVDYRLAPEH-RLPAAYDDAMD-ALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 84 viv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g---~~vv~~dyr~~~~~-~~~~~~~D~~~-a~~~l~~~~~~~~~~~~d 158 (229)
.||+..|-+...+.... -..+...+....| +.+..++|.-.... .+.....+... +.+.+.+... ...
T Consensus 7 ~vi~aRGT~E~~g~~~~--g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~-----~CP 79 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRV--GPPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAA-----RCP 79 (179)
T ss_dssp EEEEE--TTSSTTTCCC--HHHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHH-----HST
T ss_pred EEEEecCCCCCCCCccc--cHHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHH-----hCC
Confidence 45556664443222111 1233444444444 45666778854433 33333222222 2222222211 122
Q ss_pred CCcEEEEecchhHHHHHHHHHH--hhhhcCCCCCcceeEEEe--ccccC
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLR--ATAQVNNLLPLKIKGLLL--FPFFG 203 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~--~~~~~~~~~~~~v~g~il--~P~~~ 203 (229)
-.+|+|+|+|.||.++..++.. ... ....+|.++++ .|...
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~----~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPP----DVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSH----HHHHHEEEEEEES-TTTB
T ss_pred CCCEEEEecccccHHHHHHHHhccCCh----hhhhhEEEEEEecCCccc
Confidence 3699999999999999998877 111 11236899888 67653
No 183
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=96.03 E-value=0.035 Score=47.80 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=58.6
Q ss_pred CCccEEEEEcCCcccccCCCCcch-----HHHHHHHH------hhCCcEEEEEecCCCC-----------C-----CCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLS-----HEFCSNVA------VELPAIVVSVDYRLAP-----------E-----HRLP 132 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~-----~~~~~~~~------~~~g~~vv~~dyr~~~-----------~-----~~~~ 132 (229)
++..+|+.+|+ ..|+.....+ ..+...+. ....+.|+++|-=+++ + ..||
T Consensus 49 ~~~NaVli~Ha---LtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP 125 (368)
T COG2021 49 EKDNAVLICHA---LTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFP 125 (368)
T ss_pred cCCceEEEecc---ccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCC
Confidence 45679999998 2332222111 01333332 1235789999854432 1 1233
Q ss_pred -chHHHHHHHHHHHHHhcchhhhcCCCCCcEE-EEecchhHHHHHHHHHHhhh
Q 040311 133 -AAYDDAMDALHWIKNTQDDWLMKHADFDNCF-LIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 133 -~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~-l~G~S~GG~la~~~a~~~~~ 183 (229)
-.+.|...+-+.+.+.+ ||. ++. ++|.||||..|+.-+..+++
T Consensus 126 ~~ti~D~V~aq~~ll~~L------GI~--~l~avvGgSmGGMqaleWa~~yPd 170 (368)
T COG2021 126 VITIRDMVRAQRLLLDAL------GIK--KLAAVVGGSMGGMQALEWAIRYPD 170 (368)
T ss_pred cccHHHHHHHHHHHHHhc------Ccc--eEeeeeccChHHHHHHHHHHhChH
Confidence 24678888777777765 444 554 99999999999999999998
No 184
>PLN02408 phospholipase A1
Probab=95.82 E-value=0.035 Score=48.12 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=29.6
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.+|.+.|||+||+||..+|......+.. ...+..+.. +|-+.
T Consensus 200 ~sI~vTGHSLGGALAtLaA~dl~~~~~~--~~~V~v~tFGsPRVG 242 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYDIKTTFKR--APMVTVISFGGPRVG 242 (365)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhcCC--CCceEEEEcCCCCcc
Confidence 4699999999999999999988762221 123554444 77654
No 185
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=95.78 E-value=0.13 Score=39.76 Aligned_cols=52 Identities=21% Similarity=0.126 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
.++|..+.+.--.... ++.++|++||.|+.+++..+.+... +|+|+++ +|+-
T Consensus 42 ~~~dWi~~l~~~v~a~---------~~~~vlVAHSLGc~~v~h~~~~~~~--------~V~GalLVAppd 94 (181)
T COG3545 42 VLDDWIARLEKEVNAA---------EGPVVLVAHSLGCATVAHWAEHIQR--------QVAGALLVAPPD 94 (181)
T ss_pred CHHHHHHHHHHHHhcc---------CCCeEEEEecccHHHHHHHHHhhhh--------ccceEEEecCCC
Confidence 3566666555433322 3459999999999999999887755 7999999 8875
No 186
>PLN02571 triacylglycerol lipase
Probab=95.77 E-value=0.04 Score=48.45 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=31.0
Q ss_pred cEEEEecchhHHHHHHHHHHhhhhcCCC------CCcceeEEEe-ccccC
Q 040311 161 NCFLIGSSAGGNIAYYAGLRATAQVNNL------LPLKIKGLLL-FPFFG 203 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~~~~~~~~------~~~~v~g~il-~P~~~ 203 (229)
+|.+.|||+||+||+..|.......... ...+|.++.. +|-+.
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVG 276 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVG 276 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCcc
Confidence 7999999999999999998775421111 1234677777 88775
No 187
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.74 E-value=0.19 Score=45.33 Aligned_cols=103 Identities=29% Similarity=0.331 Sum_probs=65.4
Q ss_pred EEEEEeCCCCCCCCCCCccEEEEE----cC---CcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHH
Q 040311 65 VRIFVPRQALDSPSSTKLPLIVDF----HG---GGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDD 137 (229)
Q Consensus 65 ~~i~~P~~~~~~~~~~~~pviv~i----HG---Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D 137 (229)
++|.-|.+... ...++|+||.= || |||- .. .... .+.+.|..|..+.+.-.|+.. ..+.|
T Consensus 54 lrI~pp~~~~~--d~~krP~vViDPRAGHGpGIGGFK----~d---SevG--~AL~~GHPvYFV~F~p~P~pg--QTl~D 120 (581)
T PF11339_consen 54 LRITPPEGVPV--DPTKRPFVVIDPRAGHGPGIGGFK----PD---SEVG--VALRAGHPVYFVGFFPEPEPG--QTLED 120 (581)
T ss_pred EEeECCCCCCC--CCCCCCeEEeCCCCCCCCCccCCC----cc---cHHH--HHHHcCCCeEEEEecCCCCCC--CcHHH
Confidence 45554554321 33678888874 55 4442 11 1122 334569888888877665433 35778
Q ss_pred HHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 138 AMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 138 ~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
+..+..-..+...+ .+-+..+.+|+|-..||..++++|+..++
T Consensus 121 V~~ae~~Fv~~V~~---~hp~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 121 VMRAEAAFVEEVAE---RHPDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHHHHHHHHHHH---hCCCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 77765444443333 24455599999999999999999999988
No 188
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.64 E-value=0.064 Score=50.42 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=31.3
Q ss_pred chHHHHHHHHHHHHHhcchhhhcCCC---CCcEEEEecchhHHHHHHHHHHh
Q 040311 133 AAYDDAMDALHWIKNTQDDWLMKHAD---FDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 133 ~~~~D~~~a~~~l~~~~~~~~~~~~d---~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
++.+=+..|++++.+..++. ...+ |..|+|+||||||.+|.+++...
T Consensus 154 dQtEYV~dAIk~ILslYr~~--~e~~~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGE--REYASPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcc--cccCCCCCceEEEEeccchhHHHHHHHhhh
Confidence 44455566666766654320 1223 77899999999999888877654
No 189
>PLN00413 triacylglycerol lipase
Probab=95.46 E-value=0.047 Score=48.67 Aligned_cols=44 Identities=20% Similarity=0.280 Sum_probs=28.2
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~ 203 (229)
.+|.+.|||+||++|..++.............++.+++. +|-+.
T Consensus 284 ~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVG 329 (479)
T PLN00413 284 SKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVG 329 (479)
T ss_pred CeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCc
Confidence 589999999999999999865432101111123455666 67664
No 190
>PLN02310 triacylglycerol lipase
Probab=95.33 E-value=0.064 Score=47.12 Aligned_cols=41 Identities=22% Similarity=0.303 Sum_probs=29.1
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.+|.+.|||+||+||+.+|...... .....+..+.. +|-..
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~---~~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATT---IPDLFVSVISFGAPRVG 250 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHh---CcCcceeEEEecCCCcc
Confidence 4799999999999999999776541 12234554555 77764
No 191
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=95.27 E-value=0.05 Score=47.71 Aligned_cols=79 Identities=23% Similarity=0.233 Sum_probs=55.2
Q ss_pred HHHHhhCCcEEEEEecCCCCC----CCCCchH-HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhh
Q 040311 108 SNVAVELPAIVVSVDYRLAPE----HRLPAAY-DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 108 ~~~~~~~g~~vv~~dyr~~~~----~~~~~~~-~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
..++.+.|..|+.++++.-.. ..+..-+ +++..+++.+++... .++|-++|++.||.++..++...+
T Consensus 132 V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg--------~~~InliGyCvGGtl~~~ala~~~ 203 (445)
T COG3243 132 VRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITG--------QKDINLIGYCVGGTLLAAALALMA 203 (445)
T ss_pred HHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhC--------ccccceeeEecchHHHHHHHHhhh
Confidence 344557799999999875322 2222333 566677777776542 268999999999999999998887
Q ss_pred hhcCCCCCcceeEEEe--ccc
Q 040311 183 AQVNNLLPLKIKGLLL--FPF 201 (229)
Q Consensus 183 ~~~~~~~~~~v~g~il--~P~ 201 (229)
. .+|+.+.+ +|+
T Consensus 204 ~-------k~I~S~T~lts~~ 217 (445)
T COG3243 204 A-------KRIKSLTLLTSPV 217 (445)
T ss_pred h-------cccccceeeecch
Confidence 7 14777766 554
No 192
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=95.26 E-value=0.36 Score=42.64 Aligned_cols=89 Identities=12% Similarity=-0.030 Sum_probs=55.5
Q ss_pred HHHHHHHHhhCCcEEEEEecCCCCCCC---CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHH
Q 040311 104 HEFCSNVAVELPAIVVSVDYRLAPEHR---LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 104 ~~~~~~~~~~~g~~vv~~dyr~~~~~~---~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~ 180 (229)
++..+.+. . |+.|..+|+.-....+ ..-.++|-.. ++.+-.. .+.++ +.|+|.++||-+++++++.
T Consensus 120 RS~V~~Ll-~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~---~l~~~i~-----~~G~~-v~l~GvCqgG~~~laa~Al 188 (406)
T TIGR01849 120 RSTVEALL-P-DHDVYITDWVNARMVPLSAGKFDLEDYID---YLIEFIR-----FLGPD-IHVIAVCQPAVPVLAAVAL 188 (406)
T ss_pred HHHHHHHh-C-CCcEEEEeCCCCCCCchhcCCCCHHHHHH---HHHHHHH-----HhCCC-CcEEEEchhhHHHHHHHHH
Confidence 44556665 4 9999999998765333 2233455443 3332221 12334 8999999999999988877
Q ss_pred hhhhcCCCCCcceeEEEe-ccccCCCC
Q 040311 181 ATAQVNNLLPLKIKGLLL-FPFFGAIK 206 (229)
Q Consensus 181 ~~~~~~~~~~~~v~g~il-~P~~~~~~ 206 (229)
..+. ..+.+++.+++ ...+|...
T Consensus 189 ~a~~---~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 189 MAEN---EPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred HHhc---CCCCCcceEEEEecCccCCC
Confidence 6551 11225889888 66666543
No 193
>PLN02802 triacylglycerol lipase
Probab=95.26 E-value=0.067 Score=48.10 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=29.6
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
-+|.+.|||+||++|+.+|......... ..+|..+.. +|-+.
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~--~~pV~vyTFGsPRVG 372 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPA--APPVAVFSFGGPRVG 372 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCC--CCceEEEEcCCCCcc
Confidence 4799999999999999999887652221 124555555 77654
No 194
>PLN02162 triacylglycerol lipase
Probab=95.14 E-value=0.072 Score=47.45 Aligned_cols=47 Identities=23% Similarity=0.205 Sum_probs=29.1
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccCCC
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFGAI 205 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~~~ 205 (229)
..++++.|||+||++|+.++.............++.+++. +|-....
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn~ 325 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGDE 325 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccCH
Confidence 3589999999999999998765432111111113445666 7766433
No 195
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.00 E-value=0.39 Score=39.80 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=60.2
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC-CchHHHHHHHHHHHHHhcchhhhcCCCCC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL-PAAYDDAMDALHWIKNTQDDWLMKHADFD 160 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~-~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ 160 (229)
.| +|.+||=|=. -.+.....+.+.+-.-.|..|.+.+-.-+-+..+ ....+.+..+.+.+. +..+ -++
T Consensus 24 ~P-~ii~HGigd~---c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~-~m~~------lsq 92 (296)
T KOG2541|consen 24 VP-VIVWHGIGDS---CSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVK-QMPE------LSQ 92 (296)
T ss_pred CC-EEEEeccCcc---cccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHh-cchh------ccC
Confidence 55 5667992211 1112234555555555788888887544422222 233345555555555 3322 246
Q ss_pred cEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--cccc
Q 040311 161 NCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFF 202 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~ 202 (229)
-+.++|.|.||-++-.++...++ ++|+-.|. +|-.
T Consensus 93 Gynivg~SQGglv~Raliq~cd~-------ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 93 GYNIVGYSQGGLVARALIQFCDN-------PPVKNFISLGGPHA 129 (296)
T ss_pred ceEEEEEccccHHHHHHHHhCCC-------CCcceeEeccCCcC
Confidence 78999999999999888887755 34556555 5543
No 196
>PLN02324 triacylglycerol lipase
Probab=94.99 E-value=0.1 Score=45.89 Aligned_cols=45 Identities=16% Similarity=0.135 Sum_probs=30.4
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCC-------CCCcceeEEEe-ccccCC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNN-------LLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~-------~~~~~v~g~il-~P~~~~ 204 (229)
-+|.+.|||+||+||+..|......... ....+|..+.. +|-+.-
T Consensus 215 ~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN 267 (415)
T PLN02324 215 ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGD 267 (415)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCC
Confidence 3799999999999999999876442110 12334665555 886643
No 197
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.95 E-value=0.098 Score=47.20 Aligned_cols=43 Identities=26% Similarity=0.328 Sum_probs=29.4
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
-+|.|.|||+||+||+..|........... .+..+.. +|-+.-
T Consensus 318 ~SItVTGHSLGGALAtLaA~DIa~~~p~~~--~VtvyTFGsPRVGN 361 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYEAARSVPALS--NISVISFGAPRVGN 361 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHHHHHhCCCCC--CeeEEEecCCCccC
Confidence 479999999999999999987655222221 3554455 776543
No 198
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=94.91 E-value=0.026 Score=44.77 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=64.9
Q ss_pred EEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC-----CCCCCc--hHHHHHHHHHHHHHhcchhhhcC
Q 040311 84 LIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP-----EHRLPA--AYDDAMDALHWIKNTQDDWLMKH 156 (229)
Q Consensus 84 viv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~-----~~~~~~--~~~D~~~a~~~l~~~~~~~~~~~ 156 (229)
.|+.+.| ..|+.... +..-+..+.....+++|+.|-++.+ +..++. ...|+..+++-+...
T Consensus 44 ~iLlipG---alGs~~tD-f~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-------- 111 (277)
T KOG2984|consen 44 YILLIPG---ALGSYKTD-FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-------- 111 (277)
T ss_pred eeEeccc---cccccccc-CCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh--------
Confidence 5777777 23333322 4444555555556899999977653 334433 358888888866543
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
+..++.|+|.|-||..|+.+|.+.++ .|..+++
T Consensus 112 -k~~~fsvlGWSdGgiTalivAak~~e--------~v~rmii 144 (277)
T KOG2984|consen 112 -KLEPFSVLGWSDGGITALIVAAKGKE--------KVNRMII 144 (277)
T ss_pred -CCCCeeEeeecCCCeEEEEeeccChh--------hhhhhee
Confidence 44799999999999999999999887 5666665
No 199
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=94.77 E-value=0.4 Score=40.17 Aligned_cols=100 Identities=21% Similarity=0.287 Sum_probs=59.5
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHH-----HHHHHhhCCcEEEEEecCCCCC--------CCCCchHHHHHHHHHHHH
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEF-----CSNVAVELPAIVVSVDYRLAPE--------HRLPAAYDDAMDALHWIK 146 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~-----~~~~~~~~g~~vv~~dyr~~~~--------~~~~~~~~D~~~a~~~l~ 146 (229)
+++|+||=+|.=|- ....-+..+ +..+. ..+.++-+|-.+..+ ..+| .+++....+..+.
T Consensus 21 ~~kp~ilT~HDvGl----Nh~scF~~ff~~~~m~~i~--~~f~i~Hi~aPGqe~ga~~~p~~y~yP-smd~LAe~l~~Vl 93 (283)
T PF03096_consen 21 GNKPAILTYHDVGL----NHKSCFQGFFNFEDMQEIL--QNFCIYHIDAPGQEEGAATLPEGYQYP-SMDQLAEMLPEVL 93 (283)
T ss_dssp TTS-EEEEE--TT------HHHHCHHHHCSHHHHHHH--TTSEEEEEE-TTTSTT-----TT------HHHHHCTHHHHH
T ss_pred CCCceEEEeccccc----cchHHHHHHhcchhHHHHh--hceEEEEEeCCCCCCCccccccccccc-CHHHHHHHHHHHH
Confidence 47899999998332 211112222 33332 478999999886532 1232 2456666666666
Q ss_pred HhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 147 NTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 147 ~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
+++ ++ +.++-+|--+||++-+.+|+.+++ +|.|+|| +|-.
T Consensus 94 ~~f------~l--k~vIg~GvGAGAnIL~rfAl~~p~--------~V~GLiLvn~~~ 134 (283)
T PF03096_consen 94 DHF------GL--KSVIGFGVGAGANILARFALKHPE--------RVLGLILVNPTC 134 (283)
T ss_dssp HHH------T-----EEEEEETHHHHHHHHHHHHSGG--------GEEEEEEES---
T ss_pred HhC------Cc--cEEEEEeeccchhhhhhccccCcc--------ceeEEEEEecCC
Confidence 664 33 579999999999999999999999 7999999 8764
No 200
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=94.69 E-value=0.1 Score=45.53 Aligned_cols=83 Identities=24% Similarity=0.305 Sum_probs=52.6
Q ss_pred cEEEEEcC-CcccccCCCCcchHHHHHHHHhhCCcEEEEEe-cCCCCCCCCC-chHHHHHHHHHHHHHhcchhhhcCCCC
Q 040311 83 PLIVDFHG-GGFIFFSAASSLSHEFCSNVAVELPAIVVSVD-YRLAPEHRLP-AAYDDAMDALHWIKNTQDDWLMKHADF 159 (229)
Q Consensus 83 pviv~iHG-Gg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~d-yr~~~~~~~~-~~~~D~~~a~~~l~~~~~~~~~~~~d~ 159 (229)
-+-||+-| |||.--+ +.....+ .+.|+.||.+| .|..=....| ....|....+++-..+- ..
T Consensus 261 ~~av~~SGDGGWr~lD------k~v~~~l-~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w--------~~ 325 (456)
T COG3946 261 TVAVFYSGDGGWRDLD------KEVAEAL-QKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRW--------GA 325 (456)
T ss_pred eEEEEEecCCchhhhh------HHHHHHH-HHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhh--------Cc
Confidence 45567777 8885222 3445555 46799999999 3322112233 34578888887776653 33
Q ss_pred CcEEEEecchhHHHHHHHHHH
Q 040311 160 DNCFLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~ 180 (229)
.++.|+|.|.|+-+--..-.+
T Consensus 326 ~~~~liGySfGADvlP~~~n~ 346 (456)
T COG3946 326 KRVLLIGYSFGADVLPFAYNR 346 (456)
T ss_pred ceEEEEeecccchhhHHHHHh
Confidence 799999999999765444433
No 201
>PLN02934 triacylglycerol lipase
Probab=94.66 E-value=0.12 Score=46.60 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=20.1
Q ss_pred CcEEEEecchhHHHHHHHHHHhh
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
.+|++.|||+||++|..++....
T Consensus 321 ~kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 321 AKFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred CeEEEeccccHHHHHHHHHHHHH
Confidence 58999999999999999986543
No 202
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.55 E-value=0.42 Score=42.88 Aligned_cols=120 Identities=14% Similarity=0.118 Sum_probs=77.0
Q ss_pred EEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-CC-------------
Q 040311 66 RIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-RL------------- 131 (229)
Q Consensus 66 ~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-~~------------- 131 (229)
++|.+.... ....|+.++|-|-|-........ -......+|.+.|..|+.+++|..+.. +.
T Consensus 74 ~~y~n~~~~----~~~gPiFLmIGGEgp~~~~wv~~-~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs 148 (514)
T KOG2182|consen 74 RFYNNNQWA----KPGGPIFLMIGGEGPESDKWVGN-ENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSS 148 (514)
T ss_pred heeeccccc----cCCCceEEEEcCCCCCCCCcccc-CcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhH
Confidence 456665552 15568888887744432111110 112345677788999999999964321 11
Q ss_pred CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccC
Q 040311 132 PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFG 203 (229)
Q Consensus 132 ~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~ 203 (229)
...+.|+...++.+...... -+..+.+..|.|.-|.|++++=..+|+ -+.|.|. +|...
T Consensus 149 ~QALaDla~fI~~~n~k~n~-----~~~~~WitFGgSYsGsLsAW~R~~yPe--------l~~GsvASSapv~A 209 (514)
T KOG2182|consen 149 LQALADLAEFIKAMNAKFNF-----SDDSKWITFGGSYSGSLSAWFREKYPE--------LTVGSVASSAPVLA 209 (514)
T ss_pred HHHHHHHHHHHHHHHhhcCC-----CCCCCeEEECCCchhHHHHHHHHhCch--------hheeecccccceeE
Confidence 13467777777666655421 233599999999999999999999988 5778777 45543
No 203
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.42 E-value=0.33 Score=41.50 Aligned_cols=72 Identities=13% Similarity=0.071 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcC--CCCCcceeEEEe-ccccCCCCCChhhh
Q 040311 136 DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVN--NLLPLKIKGLLL-FPFFGAIKRTTSEL 212 (229)
Q Consensus 136 ~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~--~~~~~~v~g~il-~P~~~~~~~~~~~~ 212 (229)
.|...+++-..+...+ ...+.++|.|+|.||+.+-.+|.+..+... ......++|+++ .|+++......++.
T Consensus 32 ~d~~~fL~~Ff~~~p~-----~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~~~~~~~ 106 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQ-----YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRI 106 (319)
T ss_pred HHHHHHHHHHHHhCcc-----cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccccchhHh
Confidence 4554444433333332 356789999999999999988887754211 123467999999 99998765544433
No 204
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=94.41 E-value=1 Score=39.31 Aligned_cols=131 Identities=14% Similarity=0.227 Sum_probs=79.3
Q ss_pred EEEEEEeCCCCCCCCCCCccEEEEEcCCcccc-cCCCCcchHHHHHHHHhhCCcEEEEEe--------cCCCCC------
Q 040311 64 WVRIFVPRQALDSPSSTKLPLIVDFHGGGFIF-FSAASSLSHEFCSNVAVELPAIVVSVD--------YRLAPE------ 128 (229)
Q Consensus 64 ~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~-g~~~~~~~~~~~~~~~~~~g~~vv~~d--------yr~~~~------ 128 (229)
.+.|+.|++.. .....++++.||.-.. ...........+..+|...|.+|+.+. |...+.
T Consensus 51 ~l~I~vP~~~~-----~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~ 125 (367)
T PF10142_consen 51 WLTIYVPKNDK-----NPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDA 125 (367)
T ss_pred EEEEEECCCCC-----CCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHH
Confidence 46689999732 5667899999987111 111222245678889988898888764 221111
Q ss_pred --------------CCCCc---hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCc
Q 040311 129 --------------HRLPA---AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPL 191 (229)
Q Consensus 129 --------------~~~~~---~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~ 191 (229)
..++- +..-+..|++-+.+...+. .+++.++.+|.|.|==|..+...|... .
T Consensus 126 iIAytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~--~~~~i~~FvV~GaSKRGWTtWltaa~D---------~ 194 (367)
T PF10142_consen 126 IIAYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKK--FGVNIEKFVVTGASKRGWTTWLTAAVD---------P 194 (367)
T ss_pred HHHHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhh--cCCCccEEEEeCCchHhHHHHHhhccC---------c
Confidence 11111 1122333333333332221 367889999999999999988888732 2
Q ss_pred ceeEEEe--ccccCCCCCChh
Q 040311 192 KIKGLLL--FPFFGAIKRTTS 210 (229)
Q Consensus 192 ~v~g~il--~P~~~~~~~~~~ 210 (229)
+|+|++- .+.++.......
T Consensus 195 RV~aivP~Vid~LN~~~~l~h 215 (367)
T PF10142_consen 195 RVKAIVPIVIDVLNMKANLEH 215 (367)
T ss_pred ceeEEeeEEEccCCcHHHHHH
Confidence 5888877 677776554333
No 205
>PLN02753 triacylglycerol lipase
Probab=94.30 E-value=0.19 Score=45.40 Aligned_cols=44 Identities=20% Similarity=0.167 Sum_probs=30.3
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCC----CCcceeEEEe-ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNL----LPLKIKGLLL-FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~----~~~~v~g~il-~P~~~ 203 (229)
-+|.+.|||+||+||+.+|.......... ...+|..+.. +|-+.
T Consensus 312 ~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVG 360 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVG 360 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCcc
Confidence 58999999999999999998765421111 1234565555 77664
No 206
>PLN02761 lipase class 3 family protein
Probab=94.30 E-value=0.15 Score=46.09 Aligned_cols=44 Identities=18% Similarity=0.152 Sum_probs=29.8
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCC-----CCCcceeEEEe-ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNN-----LLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~-----~~~~~v~g~il-~P~~~ 203 (229)
-+|.+.|||+||+||...|......... ....+|..+.. +|-+.
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVG 343 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVG 343 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcC
Confidence 4799999999999999999876542111 12234665555 77654
No 207
>PLN02719 triacylglycerol lipase
Probab=94.25 E-value=0.18 Score=45.44 Aligned_cols=44 Identities=18% Similarity=0.184 Sum_probs=30.2
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCC----CCcceeEEEe-ccccC
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNL----LPLKIKGLLL-FPFFG 203 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~----~~~~v~g~il-~P~~~ 203 (229)
-+|.+.|||+||+||+.+|.......... ...+|..+.. +|-+.
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVG 346 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVG 346 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCcc
Confidence 48999999999999999998775521111 1234665555 77654
No 208
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.01 E-value=0.18 Score=43.45 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 136 DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 136 ~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
....+.++-+.+...+ -+|.+.|||+||+||..+|......+.. ...+++-+.. .|=+.
T Consensus 155 ~~~~~~~~~L~~~~~~--------~~i~vTGHSLGgAlA~laa~~i~~~~~~-~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN--------YSIWVTGHSLGGALASLAALDLVKNGLK-TSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHHHhcCC--------cEEEEecCChHHHHHHHHHHHHHHcCCC-CCCceEEEEecCCCcc
Confidence 3444455555555433 4899999999999999999988763222 1223444444 77554
No 209
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=93.82 E-value=3 Score=35.17 Aligned_cols=111 Identities=22% Similarity=0.247 Sum_probs=70.9
Q ss_pred CCEEEEEEEeCCCCCCCCCCCccEEEEEcCCcccccCCCCcchHHH-----HHHHHhhCCcEEEEEecCCC-------C-
Q 040311 61 KNTWVRIFVPRQALDSPSSTKLPLIVDFHGGGFIFFSAASSLSHEF-----CSNVAVELPAIVVSVDYRLA-------P- 127 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~pviv~iHGGg~~~g~~~~~~~~~~-----~~~~~~~~g~~vv~~dyr~~-------~- 127 (229)
+.+.+.++--. ++++|+||-.|.=|- .....|..+ ++.+.. .+.+.-+|-.+. |
T Consensus 32 G~v~V~V~Gd~-------~~~kpaiiTyhDlgl----N~~scFq~ff~~p~m~ei~~--~fcv~HV~~PGqe~gAp~~p~ 98 (326)
T KOG2931|consen 32 GVVHVTVYGDP-------KGNKPAIITYHDLGL----NHKSCFQGFFNFPDMAEILE--HFCVYHVDAPGQEDGAPSFPE 98 (326)
T ss_pred ccEEEEEecCC-------CCCCceEEEeccccc----chHhHhHHhhcCHhHHHHHh--heEEEecCCCccccCCccCCC
Confidence 44666565322 146788999998332 222112222 333332 377877776642 1
Q ss_pred CCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 128 EHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 128 ~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
+..+|+ ++|+.+-+..+.+++. -+.|+-+|--+|+++-+..|+.+++ +|-|+|| .+-
T Consensus 99 ~y~yPs-md~LAd~l~~VL~~f~--------lk~vIg~GvGAGAyIL~rFAl~hp~--------rV~GLvLIn~~ 156 (326)
T KOG2931|consen 99 GYPYPS-MDDLADMLPEVLDHFG--------LKSVIGMGVGAGAYILARFALNHPE--------RVLGLVLINCD 156 (326)
T ss_pred CCCCCC-HHHHHHHHHHHHHhcC--------cceEEEecccccHHHHHHHHhcChh--------heeEEEEEecC
Confidence 223443 5666666666666542 2579999999999999999999998 8999999 654
No 210
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=93.54 E-value=0.21 Score=41.72 Aligned_cols=36 Identities=22% Similarity=0.200 Sum_probs=26.6
Q ss_pred CcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--cccc
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFF 202 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~ 202 (229)
+=+.++|+|.||.++-.++.+.++ ++|+-+|. +|-.
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-------~~V~nlISlggph~ 117 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-------PPVHNLISLGGPHM 117 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-------S-EEEEEEES--TT
T ss_pred cceeeeeeccccHHHHHHHHHCCC-------CCceeEEEecCccc
Confidence 468999999999999999999876 46888888 5543
No 211
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.97 E-value=1.3 Score=39.82 Aligned_cols=62 Identities=16% Similarity=0.123 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccC
Q 040311 134 AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFG 203 (229)
Q Consensus 134 ~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~ 203 (229)
.-.|+..+.+.+.+...++ .-.-++.+|+|.|.||+=+..+|....+.. ..++++++ ++.+.
T Consensus 175 ~~~D~~~~~~~f~~~fp~~---~r~~~~~~L~GESYgg~yip~~A~~L~~~~-----~~~~~~~nlssvli 237 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHY---ARLLSPKFLAGESYGGHYIPVFAHELLEDN-----IALNGNVNLSSVLI 237 (498)
T ss_pred cchhHHHHHHHHHHHHHHH---hhhcCceeEeeccccchhhHHHHHHHHHhc-----cccCCceEeeeeee
Confidence 3478888887777766543 222258999999999998888887765511 23455555 55543
No 212
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=92.82 E-value=1.2 Score=34.40 Aligned_cols=81 Identities=20% Similarity=0.163 Sum_probs=47.1
Q ss_pred hHHHHHHHHhhCCcEEEEEecCCCCC-CCCCchHHHHHHH-HHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHH
Q 040311 103 SHEFCSNVAVELPAIVVSVDYRLAPE-HRLPAAYDDAMDA-LHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 103 ~~~~~~~~~~~~g~~vv~~dyr~~~~-~~~~~~~~D~~~a-~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~ 180 (229)
|..+...+. ..+.++.+++.+... ......+++.... .+.+.+. ....++.++|||+||.++..++.+
T Consensus 15 ~~~~~~~l~--~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~l~g~s~Gg~~a~~~a~~ 84 (212)
T smart00824 15 YARLAAALR--GRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRA--------AGGRPFVLVGHSSGGLLAHAVAAR 84 (212)
T ss_pred HHHHHHhcC--CCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHh--------cCCCCeEEEEECHHHHHHHHHHHH
Confidence 445555553 257788888775422 2223333333222 2222221 123578999999999999999988
Q ss_pred hhhhcCCCCCcceeEEEe
Q 040311 181 ATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 181 ~~~~~~~~~~~~v~g~il 198 (229)
..+ ....+.++++
T Consensus 85 l~~-----~~~~~~~l~~ 97 (212)
T smart00824 85 LEA-----RGIPPAAVVL 97 (212)
T ss_pred HHh-----CCCCCcEEEE
Confidence 765 1224666665
No 213
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.79 E-value=0.29 Score=40.94 Aligned_cols=24 Identities=38% Similarity=0.542 Sum_probs=21.4
Q ss_pred CcEEEEecchhHHHHHHHHHHhhh
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
.+|.|.|||.||++|..+..++.-
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fgl 299 (425)
T KOG4540|consen 276 ARIWLTGHSLGGAIASLLGIRFGL 299 (425)
T ss_pred ceEEEeccccchHHHHHhccccCC
Confidence 699999999999999999988743
No 214
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.79 E-value=0.29 Score=40.94 Aligned_cols=24 Identities=38% Similarity=0.542 Sum_probs=21.4
Q ss_pred CcEEEEecchhHHHHHHHHHHhhh
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
.+|.|.|||.||++|..+..++.-
T Consensus 276 a~iwlTGHSLGGa~AsLlG~~fgl 299 (425)
T COG5153 276 ARIWLTGHSLGGAIASLLGIRFGL 299 (425)
T ss_pred ceEEEeccccchHHHHHhccccCC
Confidence 699999999999999999988743
No 215
>PLN02847 triacylglycerol lipase
Probab=92.43 E-value=0.24 Score=45.54 Aligned_cols=24 Identities=21% Similarity=0.173 Sum_probs=21.1
Q ss_pred CcEEEEecchhHHHHHHHHHHhhh
Q 040311 160 DNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
-+|.+.|||+||++|+.++.....
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhc
Confidence 489999999999999999887654
No 216
>PLN02606 palmitoyl-protein thioesterase
Probab=92.40 E-value=2.4 Score=35.99 Aligned_cols=106 Identities=16% Similarity=0.033 Sum_probs=55.5
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCC-CchHHHHHHHHHHHHHhcchhhhcCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRL-PAAYDDAMDALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~-~~~~~D~~~a~~~l~~~~~~~~~~~~d 158 (229)
.+.| ||..||=|=. .... +...+...+....|.-+..+.-...-...+ ....+.+..+.+.+.. ..+ .
T Consensus 25 ~~~P-vViwHGlgD~-~~~~--~~~~~~~~i~~~~~~pg~~v~ig~~~~~s~~~~~~~Qv~~vce~l~~-~~~-----L- 93 (306)
T PLN02606 25 LSVP-FVLFHGFGGE-CSNG--KVSNLTQFLINHSGYPGTCVEIGNGVQDSLFMPLRQQASIACEKIKQ-MKE-----L- 93 (306)
T ss_pred CCCC-EEEECCCCcc-cCCc--hHHHHHHHHHhCCCCCeEEEEECCCcccccccCHHHHHHHHHHHHhc-chh-----h-
Confidence 3456 5667993211 1111 233344444212355444443111111222 3334555555555554 221 1
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--cccc
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFF 202 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~ 202 (229)
.+-+.++|+|.||.++-.++.+.++ .++|+-+|. +|-.
T Consensus 94 ~~G~naIGfSQGglflRa~ierc~~------~p~V~nlISlggph~ 133 (306)
T PLN02606 94 SEGYNIVAESQGNLVARGLIEFCDN------APPVINYVSLGGPHA 133 (306)
T ss_pred cCceEEEEEcchhHHHHHHHHHCCC------CCCcceEEEecCCcC
Confidence 1358899999999999999999865 135777777 4443
No 217
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.35 E-value=1.7 Score=35.27 Aligned_cols=63 Identities=22% Similarity=0.163 Sum_probs=40.6
Q ss_pred CcEEEEEecCC--CC-----CCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 115 PAIVVSVDYRL--AP-----EHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 115 g~~vv~~dyr~--~~-----~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
|+.+..++|.- .| ...+...+.+....+.-..... ....++++++|+|.|+.++...+.+...
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~------~~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAA------IAAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhh------ccCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 56777788774 22 2344445555554444433321 1145789999999999999998888765
No 218
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.35 E-value=0.22 Score=45.72 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=58.7
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCC--cEEEEEecCCC-CCCCCCchHHHHHHHHHHHHHhcchhhhcC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELP--AIVVSVDYRLA-PEHRLPAAYDDAMDALHWIKNTQDDWLMKH 156 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g--~~vv~~dyr~~-~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~ 156 (229)
.-.|+++++||++- .+.... .+..+-..+ ...| ..+..+|++.. .+.+.....+-...+.++....... .
T Consensus 174 ~~spl~i~aps~p~-ap~tSd-~~~~wqs~l-sl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~g----e 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPL-APKTSD-RMWSWQSRL-SLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITG----E 246 (784)
T ss_pred cCCceEEeccCCCC-CCccch-HHHhHHHHH-hhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhc----c
Confidence 34689999999772 222222 233333333 2223 34556666642 3233322233333333333322211 3
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--cccc
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFF 202 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~ 202 (229)
.....|+|+|.|+|+.+++++....-+ ..|.++|. +|.-
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsd-------v~V~~vVCigypl~ 287 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSD-------VEVDAVVCIGYPLD 287 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCC-------ceEEEEEEeccccc
Confidence 456789999999997777776644333 35888888 6663
No 219
>PLN02633 palmitoyl protein thioesterase family protein
Probab=91.47 E-value=4.1 Score=34.64 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=54.4
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC-chHHHHHHHHHHHHHhcchhhhcCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP-AAYDDAMDALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~-~~~~D~~~a~~~l~~~~~~~~~~~~d 158 (229)
.+.| +|+.||=|=.-.+. +...+...+....|.-+.++.-..+.+..|- ...+.+..+.+.+.+ ..+ .
T Consensus 24 ~~~P-~ViwHG~GD~c~~~---g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~-~~~-----l- 92 (314)
T PLN02633 24 VSVP-FIMLHGIGTQCSDA---TNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQ-MKE-----L- 92 (314)
T ss_pred CCCC-eEEecCCCcccCCc---hHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhh-chh-----h-
Confidence 4556 45569922111111 2233444443334666655543333222222 223444455555554 222 1
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
.+-+.++|+|.||.++-.+..+.++ .++|+-+|.
T Consensus 93 ~~G~naIGfSQGGlflRa~ierc~~------~p~V~nlIS 126 (314)
T PLN02633 93 SQGYNIVGRSQGNLVARGLIEFCDG------GPPVYNYIS 126 (314)
T ss_pred hCcEEEEEEccchHHHHHHHHHCCC------CCCcceEEE
Confidence 1358899999999999999998865 125777777
No 220
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=91.31 E-value=0.73 Score=42.53 Aligned_cols=68 Identities=12% Similarity=0.064 Sum_probs=42.0
Q ss_pred HHHHHHHHhhCCc-----EEEEEecCCCCCCCC--CchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHH
Q 040311 104 HEFCSNVAVELPA-----IVVSVDYRLAPEHRL--PAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYY 176 (229)
Q Consensus 104 ~~~~~~~~~~~g~-----~vv~~dyr~~~~~~~--~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~ 176 (229)
..++..|+ +.|| ..+..|+|+++...- ...+......++.+.+.. .-++|+|+||||||.++..
T Consensus 159 ~kLIe~L~-~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--------ggkKVVLV~HSMGglv~ly 229 (642)
T PLN02517 159 AVLIANLA-RIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--------GGKKVVVVPHSMGVLYFLH 229 (642)
T ss_pred HHHHHHHH-HcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc--------CCCeEEEEEeCCchHHHHH
Confidence 45667676 4465 345567887753221 223444555555444321 1268999999999999998
Q ss_pred HHHH
Q 040311 177 AGLR 180 (229)
Q Consensus 177 ~a~~ 180 (229)
+...
T Consensus 230 FL~w 233 (642)
T PLN02517 230 FMKW 233 (642)
T ss_pred HHHh
Confidence 7764
No 221
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.01 E-value=0.64 Score=36.06 Aligned_cols=52 Identities=12% Similarity=0.030 Sum_probs=38.5
Q ss_pred HHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCCC
Q 040311 140 DALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIKR 207 (229)
Q Consensus 140 ~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~~ 207 (229)
+--+|+.+... +.+..+.|.|+||..|+.+..+.|+ -..++|. |...|..+.
T Consensus 89 AyerYv~eEal--------pgs~~~sgcsmGayhA~nfvfrhP~--------lftkvialSGvYdardf 141 (227)
T COG4947 89 AYERYVIEEAL--------PGSTIVSGCSMGAYHAANFVFRHPH--------LFTKVIALSGVYDARDF 141 (227)
T ss_pred HHHHHHHHhhc--------CCCccccccchhhhhhhhhheeChh--------HhhhheeecceeeHHHh
Confidence 34466666542 2567889999999999999999998 4567777 777765543
No 222
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=88.73 E-value=9.8 Score=29.66 Aligned_cols=40 Identities=20% Similarity=0.287 Sum_probs=29.2
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccCCC
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFGAI 205 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~~~ 205 (229)
...++.++|||+|.-++..++.+.. ..+.-+++ ||-+...
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~~~--------~~vddvv~~GSPG~g~~ 148 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQGG--------LRVDDVVLVGSPGMGVD 148 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhhCC--------CCcccEEEECCCCCCCC
Confidence 4569999999999988888776622 24666666 9987543
No 223
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=88.69 E-value=8 Score=33.17 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
.+.+..|++||..+.+. -++|++.|+|-|+..|-.+|.-.
T Consensus 104 ~~nI~~AYrFL~~~yep-------GD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 104 VQNIREAYRFLIFNYEP-------GDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred HHHHHHHHHHHHHhcCC-------CCeEEEeeccchhHHHHHHHHHH
Confidence 36788899999988643 26999999999999998887543
No 224
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=87.94 E-value=1.4 Score=39.33 Aligned_cols=71 Identities=18% Similarity=0.161 Sum_probs=41.9
Q ss_pred HHHHHHHHhhCCcE------EEEEecCCCCCCC--CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHH
Q 040311 104 HEFCSNVAVELPAI------VVSVDYRLAPEHR--LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAY 175 (229)
Q Consensus 104 ~~~~~~~~~~~g~~------vv~~dyr~~~~~~--~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~ 175 (229)
+.+...++ .-||. -+..|+|++.... ...-+.+...-++...+... -.+|+|++||||+.+..
T Consensus 127 ~~~i~~lv-~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G--------~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 127 HELIENLV-GIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNG--------GKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHH-hhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcC--------CCceEEEecCCccHHHH
Confidence 44555554 33443 4456778865321 11223444444444443321 26899999999999999
Q ss_pred HHHHHhhh
Q 040311 176 YAGLRATA 183 (229)
Q Consensus 176 ~~a~~~~~ 183 (229)
+.....++
T Consensus 198 yFl~w~~~ 205 (473)
T KOG2369|consen 198 YFLKWVEA 205 (473)
T ss_pred HHHhcccc
Confidence 99887765
No 225
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=87.25 E-value=6.3 Score=31.87 Aligned_cols=90 Identities=19% Similarity=0.154 Sum_probs=45.2
Q ss_pred HHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHH-HHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHH-hhh
Q 040311 106 FCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMD-ALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLR-ATA 183 (229)
Q Consensus 106 ~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~-a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~-~~~ 183 (229)
+...+.. .|+.++.+-.....-......+..+.. .++.+.+.. ..+..+|.+-..|.||......... +..
T Consensus 19 Y~~~Y~~-~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~il~H~FSnGG~~~~~~l~~~~~~ 91 (240)
T PF05705_consen 19 YSDLYQD-PGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQ------SASPPPILFHSFSNGGSFLYSQLLEAYQS 91 (240)
T ss_pred HHHHHHh-cCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhc------cCCCCCEEEEEEECchHHHHHHHHHHHHh
Confidence 4555544 799988876443211100122222222 233333321 1122489999999988766665553 222
Q ss_pred hcC-CCCCcceeEEEe--cccc
Q 040311 184 QVN-NLLPLKIKGLLL--FPFF 202 (229)
Q Consensus 184 ~~~-~~~~~~v~g~il--~P~~ 202 (229)
... ...-.+++|+|+ +|-.
T Consensus 92 ~~~~~~~~~~i~g~I~DS~P~~ 113 (240)
T PF05705_consen 92 RKKFGKLLPRIKGIIFDSCPGI 113 (240)
T ss_pred cccccccccccceeEEeCCCCc
Confidence 111 122234999999 5543
No 226
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=85.82 E-value=6.1 Score=33.14 Aligned_cols=100 Identities=17% Similarity=0.093 Sum_probs=53.5
Q ss_pred cCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCC-----CCchHHHHHHHHHHHHHhcchhhhcCCCCCcEE
Q 040311 89 HGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHR-----LPAAYDDAMDALHWIKNTQDDWLMKHADFDNCF 163 (229)
Q Consensus 89 HGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~-----~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~ 163 (229)
-|-||+... ....+..+. .-.+.++++.|+..|..- -....+-..+.++-+.++.... ..-+.-|++
T Consensus 41 TGtGWVdp~-----a~~a~E~l~-~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~l--P~~~RPkL~ 112 (289)
T PF10081_consen 41 TGTGWVDPW-----AVDALEYLY-GGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTL--PEDRRPKLY 112 (289)
T ss_pred CCCCccCHH-----HHhHHHHHh-CCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhC--CcccCCeEE
Confidence 367886322 122334443 457899999999766321 1112222223333333332221 012456899
Q ss_pred EEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccc
Q 040311 164 LIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPF 201 (229)
Q Consensus 164 l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~ 201 (229)
|.|.|+|+.-+........+ -..+++|++. .|.
T Consensus 113 l~GeSLGa~g~~~af~~~~~-----~~~~vdGalw~GpP 146 (289)
T PF10081_consen 113 LYGESLGAYGGEAAFDGLDD-----LRDRVDGALWVGPP 146 (289)
T ss_pred EeccCccccchhhhhccHHH-----hhhhcceEEEeCCC
Confidence 99999999766665544333 1125888888 543
No 227
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=85.14 E-value=4 Score=26.01 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=20.4
Q ss_pred ceEEeeEEEcCCCCEEEEEEE-eCCCCCCCCCCCccEEEEEcC
Q 040311 49 VVLSKDVTVNQSKNTWVRIFV-PRQALDSPSSTKLPLIVDFHG 90 (229)
Q Consensus 49 ~~~~~~v~~~~~~~~~~~i~~-P~~~~~~~~~~~~pviv~iHG 90 (229)
+...++..+..+|+.-+.++. |......+...++|+|++.||
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HG 51 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHG 51 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECC
Confidence 455667777788886666654 222211123467899999999
No 228
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=80.40 E-value=2.7 Score=33.96 Aligned_cols=42 Identities=17% Similarity=0.011 Sum_probs=28.9
Q ss_pred EEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCC
Q 040311 163 FLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGA 204 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~ 204 (229)
+|+|+|.|++|+..++............++++-+|+ |++...
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 599999999999999982222111223456788888 888654
No 229
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=78.33 E-value=6.2 Score=34.19 Aligned_cols=43 Identities=21% Similarity=0.293 Sum_probs=30.5
Q ss_pred CCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccccC
Q 040311 158 DFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFFG 203 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~~ 203 (229)
...+|.|+|||+|+-+...+.....+. .. .-.|.-+++ +|...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~--~~-~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAER--KA-FGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhc--cc-cCeEeeEEEecCCCCC
Confidence 334699999999999999988887762 11 123667777 66654
No 230
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=77.41 E-value=3.9 Score=34.21 Aligned_cols=40 Identities=20% Similarity=0.172 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
-..+..++.++.++... -++|+|+|+|-|+..|-.++-..
T Consensus 74 ~~~I~~ay~~l~~~~~~-------gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 74 EARIRDAYRFLSKNYEP-------GDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHHHHHHHHHhccCC-------cceEEEEecCccHHHHHHHHHHH
Confidence 46777788888777532 36799999999999999988654
No 231
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=69.11 E-value=19 Score=23.98 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
...+..-++|++++..- -.+.++.++|.|.|=++|..++..+
T Consensus 20 ~~~V~~qI~yvk~~~~~-----~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKI-----NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC--------TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC-----CCCceEEEEecCCcccHHHHHHHHh
Confidence 46677778888875421 2468999999999999998877765
No 232
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=68.63 E-value=38 Score=29.24 Aligned_cols=55 Identities=16% Similarity=0.141 Sum_probs=40.2
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhhhc-CCCCCcceeEEEe-ccccCCCCCChhh
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATAQV-NNLLPLKIKGLLL-FPFFGAIKRTTSE 211 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~~~-~~~~~~~v~g~il-~P~~~~~~~~~~~ 211 (229)
.....++|.-.|.||-+|..++....+.- ...-.....+++| -+|++..+..-|.
T Consensus 119 ~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP~D~V~SW 175 (414)
T KOG1283|consen 119 FKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISPEDFVFSW 175 (414)
T ss_pred ccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccChhHhhhcc
Confidence 46678999999999999999998664411 1112345789999 9999887765544
No 233
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=61.29 E-value=13 Score=30.24 Aligned_cols=34 Identities=21% Similarity=0.118 Sum_probs=24.9
Q ss_pred HHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 141 ALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 141 a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
+++.+.++ ++.++.-.+.|-|+|+..++.++...
T Consensus 17 Vl~~L~e~-------gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEA-------GVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHc-------CCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 45555554 45555568999999999999988753
No 234
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=57.77 E-value=42 Score=31.34 Aligned_cols=27 Identities=30% Similarity=0.164 Sum_probs=20.5
Q ss_pred CCC-CCcEEEEecchhHHHHHHHHHHhh
Q 040311 156 HAD-FDNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 156 ~~d-~~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
++. -..|.-+||||||-++=.+....-
T Consensus 521 ~VG~~RPivwI~HSmGGLl~K~lLlda~ 548 (697)
T KOG2029|consen 521 GVGDDRPIVWIGHSMGGLLAKKLLLDAY 548 (697)
T ss_pred ccCCCCceEEEecccchHHHHHHHHHHh
Confidence 443 466888999999988887776544
No 235
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=56.50 E-value=22 Score=23.14 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=25.2
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEE
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSV 121 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~ 121 (229)
...|.++++|||.-. +...++..+|.+.|+.++.+
T Consensus 29 ~~~~~~~lvhGga~~-------GaD~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 29 ARHPDMVLVHGGAPK-------GADRIAARWARERGVPVIRF 63 (71)
T ss_pred HhCCCEEEEECCCCC-------CHHHHHHHHHHHCCCeeEEe
Confidence 345789999997421 14678889999989876654
No 236
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.01 E-value=9 Score=32.02 Aligned_cols=25 Identities=36% Similarity=0.484 Sum_probs=20.6
Q ss_pred CCcEEEEecchhHHHHHHHHHHhhh
Q 040311 159 FDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
-.++.|.|-||||-+|..+......
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~~q~ 218 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSLHQK 218 (371)
T ss_pred cccceeeeeecccHHHHhhcccCCC
Confidence 4689999999999999988875443
No 237
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=54.11 E-value=25 Score=25.41 Aligned_cols=14 Identities=14% Similarity=0.199 Sum_probs=10.6
Q ss_pred CccEEEEEcCCccc
Q 040311 81 KLPLIVDFHGGGFI 94 (229)
Q Consensus 81 ~~pviv~iHGGg~~ 94 (229)
++.++||+||.-|.
T Consensus 55 ~~klaIfVDGcfWH 68 (117)
T TIGR00632 55 EYRCVIFIHGCFWH 68 (117)
T ss_pred CCCEEEEEcccccc
Confidence 45689999997554
No 238
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=52.77 E-value=62 Score=28.28 Aligned_cols=78 Identities=13% Similarity=0.136 Sum_probs=48.6
Q ss_pred EEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEE
Q 040311 84 LIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCF 163 (229)
Q Consensus 84 viv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~ 163 (229)
-|||-|-.++...+....-=+..++.+...-|.+.|.+....- ..+-...+.|+.+.++++++.+ |+ +.|+
T Consensus 268 PVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~~~i-sc~~~A~v~~v~~Hi~hIr~Va------G~--~hIG 338 (419)
T KOG4127|consen 268 PVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYPGFI-SCSDRATVSDVADHINHIRAVA------GI--DHIG 338 (419)
T ss_pred ceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeecccc-cCCCcccHHHHHHHHHHHHHhh------cc--ceee
Confidence 4789999777666554332355777777666655555442221 1233345899999999999875 32 4677
Q ss_pred EEecchh
Q 040311 164 LIGSSAG 170 (229)
Q Consensus 164 l~G~S~G 170 (229)
|.|.=-|
T Consensus 339 lGg~yDG 345 (419)
T KOG4127|consen 339 LGGDYDG 345 (419)
T ss_pred ccCCcCC
Confidence 7764433
No 239
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=50.16 E-value=1.2e+02 Score=26.88 Aligned_cols=27 Identities=15% Similarity=0.203 Sum_probs=24.0
Q ss_pred CCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
+.-++.+|-|.--|.-++..+|.-+|+
T Consensus 226 Lg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 226 LGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred hCcceeEeecCchHHHHHHHHHhhcch
Confidence 445789999999999999999999988
No 240
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=48.29 E-value=24 Score=31.54 Aligned_cols=26 Identities=23% Similarity=0.141 Sum_probs=20.6
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
++.++ ++.|.|+|+.+|+.++.+..+
T Consensus 99 gl~p~--vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 99 NLLPR--IISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred CCCCC--EEEEECHHHHHHHHHHcCCHH
Confidence 55554 699999999999999986543
No 241
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=44.31 E-value=34 Score=26.07 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=16.6
Q ss_pred EEEecchhHHHHHHHHHHh
Q 040311 163 FLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~ 181 (229)
.+.|-|+|+.+|+.++...
T Consensus 31 ~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 31 IVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 6899999999999998653
No 242
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=43.96 E-value=1.8e+02 Score=24.97 Aligned_cols=80 Identities=16% Similarity=0.120 Sum_probs=45.8
Q ss_pred HHHHHHHHhhCCcEEEEEecCCCCCCCC-------------Cch------HHHHHHHHHHHHHhcchhhhcCCCCCcEEE
Q 040311 104 HEFCSNVAVELPAIVVSVDYRLAPEHRL-------------PAA------YDDAMDALHWIKNTQDDWLMKHADFDNCFL 164 (229)
Q Consensus 104 ~~~~~~~~~~~g~~vv~~dyr~~~~~~~-------------~~~------~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l 164 (229)
..++..+-+..|..++.+|-.......+ +.. -.|--.++.-+.+.+..++....|-.-++-
T Consensus 18 L~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~~r~l~sR~dV~gmig 97 (401)
T COG5441 18 LAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAFVRFLSSRGDVAGMIG 97 (401)
T ss_pred HHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHHHHHhhcccchhheee
Confidence 4467777778899999999664211110 000 012222222222222222222345567888
Q ss_pred EecchhHHHHHHHHHHhhh
Q 040311 165 IGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 165 ~G~S~GG~la~~~a~~~~~ 183 (229)
+|.|.|-.+++-.+.+.+-
T Consensus 98 ~GGsgGT~lit~~m~~LPl 116 (401)
T COG5441 98 MGGSGGTALITPAMRRLPL 116 (401)
T ss_pred cCCCcchHhhhhHHHhcCc
Confidence 9999999999888888765
No 243
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=43.58 E-value=91 Score=28.72 Aligned_cols=68 Identities=18% Similarity=0.137 Sum_probs=40.8
Q ss_pred CCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--cccc
Q 040311 129 HRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPFF 202 (229)
Q Consensus 129 ~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~~ 202 (229)
.+|...++-...+=+-|.+.... .......|.|+|+|.|+-....+.....+ .+ .---|.-+++ .|..
T Consensus 419 npWnia~dRa~kaG~lLAe~L~~---r~qG~RPVTLVGFSLGARvIf~CL~~Lak--kk-e~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 419 NPWNIALDRADKAGELLAEALCK---RSQGNRPVTLVGFSLGARVIFECLLELAK--KK-EVGIIENVILFGAPVP 488 (633)
T ss_pred CchHHHhhHHHHHHHHHHHHHHH---hccCCCceeEeeeccchHHHHHHHHHHhh--cc-cccceeeeeeccCCcc
Confidence 45555555555554444443322 12344679999999999999987776655 11 1124666777 6664
No 244
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=40.88 E-value=74 Score=27.58 Aligned_cols=19 Identities=32% Similarity=0.501 Sum_probs=13.8
Q ss_pred CcEEEEecchhHHHHHHHH
Q 040311 160 DNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a 178 (229)
+.=.+.|-|.|++.++++-
T Consensus 303 eeGll~G~SSGan~~aAl~ 321 (362)
T KOG1252|consen 303 EEGLLVGISSGANVAAALK 321 (362)
T ss_pred hhCeeecccchHHHHHHHH
Confidence 3457899999998665543
No 245
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=40.30 E-value=58 Score=27.75 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhh
Q 040311 135 YDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 135 ~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~ 182 (229)
-..+..-++|++..... .-.|.||.++|.|.|=++|..++..+.
T Consensus 21 e~nV~~QI~y~k~~gp~----~ngPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 21 EANVLQQIDYVKAAGPI----KNGPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred HHHHHHHHHHHHhcCCc----cCCCceEEEEecCCcccHHHHHHHHhC
Confidence 35566677888776532 346889999999999999999887764
No 246
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.18 E-value=43 Score=26.92 Aligned_cols=19 Identities=21% Similarity=0.167 Sum_probs=16.5
Q ss_pred EEEecchhHHHHHHHHHHh
Q 040311 163 FLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~ 181 (229)
.+.|-|+|+-+|+.++...
T Consensus 31 ~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 31 AISGTSAGALVGGLFASGI 49 (221)
T ss_pred EEEEeCHHHHHHHHHHcCC
Confidence 5999999999999998643
No 247
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=40.03 E-value=41 Score=25.93 Aligned_cols=20 Identities=30% Similarity=0.197 Sum_probs=17.1
Q ss_pred EEEEecchhHHHHHHHHHHh
Q 040311 162 CFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 162 i~l~G~S~GG~la~~~a~~~ 181 (229)
=.+.|-|+||.+|+.++...
T Consensus 29 d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 29 KRVAGTSAGAITAALLALGY 48 (194)
T ss_pred ceEEEECHHHHHHHHHHcCC
Confidence 46899999999999998754
No 248
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=37.84 E-value=48 Score=25.21 Aligned_cols=21 Identities=24% Similarity=0.207 Sum_probs=17.3
Q ss_pred cEEEEecchhHHHHHHHHHHh
Q 040311 161 NCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~ 181 (229)
.-.+.|-|+|+.+++.++...
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 445899999999999998753
No 249
>COG1806 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.89 E-value=1.1e+02 Score=25.50 Aligned_cols=54 Identities=22% Similarity=0.385 Sum_probs=40.5
Q ss_pred CCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHH--HHHHHHHHh
Q 040311 128 EHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGN--IAYYAGLRA 181 (229)
Q Consensus 128 ~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~--la~~~a~~~ 181 (229)
.+.......|=..|++|..++.+.....+++...|+|+|-|--|- +++++|.+.
T Consensus 113 ~h~l~~~Yf~RIeAi~Fal~hDDG~~~~~l~~ADvILvGVSRtsKTPtS~YLA~q~ 168 (273)
T COG1806 113 QHSLDDDYFDRIEAINFALAHDDGQSPRNLDEADVILVGVSRTSKTPTSLYLALQG 168 (273)
T ss_pred cccchHHHHHHHHHHHHHHhccCCCCccccCccCEEEEeeccCCCCchHHHHHHhc
Confidence 344455678888999999998765433457778899999998775 667777765
No 250
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=36.82 E-value=19 Score=30.29 Aligned_cols=21 Identities=5% Similarity=-0.173 Sum_probs=17.4
Q ss_pred CCCcEEEEecchhHHHHHHHH
Q 040311 158 DFDNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a 178 (229)
...+++|..+|.-.|+|.++.
T Consensus 253 ~~a~l~I~~DSgp~HlAaa~g 273 (319)
T TIGR02193 253 AGADAVVGVDTGLTHLAAALD 273 (319)
T ss_pred HcCCEEEeCCChHHHHHHHcC
Confidence 447899999999999888764
No 251
>COG4425 Predicted membrane protein [Function unknown]
Probab=35.67 E-value=1.5e+02 Score=26.99 Aligned_cols=79 Identities=18% Similarity=0.123 Sum_probs=42.0
Q ss_pred EEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCC---------CCCCCCchHHHHHHHHHHHHHhcchhhhcC
Q 040311 86 VDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLA---------PEHRLPAAYDDAMDALHWIKNTQDDWLMKH 156 (229)
Q Consensus 86 v~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~---------~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~ 156 (229)
+---|-||+... ....+..+ ..-++..|++.|+.- ++......-.=..+++.+..+...
T Consensus 326 v~~TGTGWIdp~-----a~~t~EyL-~~Gd~asVsmQYSyL~SwLSllvdpdyg~~aa~aLf~aVy~yw~qLP~------ 393 (588)
T COG4425 326 VTSTGTGWIDPA-----AADTLEYL-YNGDVASVSMQYSYLPSWLSLLVDPDYGADAARALFEAVYGYWTQLPK------ 393 (588)
T ss_pred EcCCCCCCCCHH-----HHhHHHHH-hCCceEEEEEehhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhCCc------
Confidence 333467776211 11233333 345688899999853 232222222222334445444331
Q ss_pred CCCCcEEEEecchhHHHHHH
Q 040311 157 ADFDNCFLIGSSAGGNIAYY 176 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~ 176 (229)
-..-|++|.|.|.|+.-...
T Consensus 394 ~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 394 SSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred CCCCceEEeccccccccCcc
Confidence 24568999999999864443
No 252
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=34.56 E-value=52 Score=27.88 Aligned_cols=35 Identities=26% Similarity=0.394 Sum_probs=26.5
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAP 127 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~ 127 (229)
...|.|+|..|+|+ .+.+++ ..|+.|+..|+...|
T Consensus 250 ~~vPmi~fakG~g~------------~Le~l~-~tG~DVvgLDWTvdp 284 (359)
T KOG2872|consen 250 APVPMILFAKGSGG------------ALEELA-QTGYDVVGLDWTVDP 284 (359)
T ss_pred CCCceEEEEcCcch------------HHHHHH-hcCCcEEeecccccH
Confidence 56799999999654 345666 469999999987653
No 253
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=34.47 E-value=4.1e+02 Score=25.23 Aligned_cols=38 Identities=24% Similarity=0.200 Sum_probs=30.1
Q ss_pred EEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-ccccCCCC
Q 040311 162 CFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFFGAIK 206 (229)
Q Consensus 162 i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~~~~~ 206 (229)
|+..+-|-||+.++.++.+..+ --|.||++ -|-+.+..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~-------glIdgVvv~EP~v~~~~ 325 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQ-------GLIDGVVVSEPNVNLPP 325 (690)
T ss_pred EEEEeecCccHHHHhHhhcccC-------CceeeEEecCCccCCCC
Confidence 5566889999999999877655 25899999 89887654
No 254
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=33.75 E-value=1.5e+02 Score=26.66 Aligned_cols=97 Identities=19% Similarity=0.111 Sum_probs=60.6
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCC-----CCC-----chHHHHHHHHHHHHHhc
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEH-----RLP-----AAYDDAMDALHWIKNTQ 149 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~-----~~~-----~~~~D~~~a~~~l~~~~ 149 (229)
..+|+|++--|-+-.... . . ..+..-.+.+-+.++||..... .|. ....|...+++-++..
T Consensus 61 ~drPtV~~T~GY~~~~~p-~----r---~Ept~Lld~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i- 131 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSP-R----R---SEPTQLLDGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI- 131 (448)
T ss_pred CCCCeEEEecCcccccCc-c----c---cchhHhhccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh-
Confidence 467999998883322111 1 1 1223334677899999975322 111 2346666666665543
Q ss_pred chhhhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe--ccc
Q 040311 150 DDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL--FPF 201 (229)
Q Consensus 150 ~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il--~P~ 201 (229)
=+.+=+-.|-|=||..++..=.-+|+ -|.+.|. +|.
T Consensus 132 --------Y~~kWISTG~SKGGmTa~y~rrFyP~--------DVD~tVaYVAP~ 169 (448)
T PF05576_consen 132 --------YPGKWISTGGSKGGMTAVYYRRFYPD--------DVDGTVAYVAPN 169 (448)
T ss_pred --------ccCCceecCcCCCceeEEEEeeeCCC--------CCCeeeeeeccc
Confidence 34577778999999888777666666 5889998 665
No 255
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=33.01 E-value=73 Score=26.39 Aligned_cols=22 Identities=23% Similarity=0.120 Sum_probs=17.0
Q ss_pred CCCCCcEEEEecchhHHHHHHHHH
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~ 179 (229)
|+.| -+++|||.|-..|+.++-
T Consensus 80 Gi~p--~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 80 GVRP--DAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred CCcc--cEEEecCHHHHHHHHHhC
Confidence 6655 479999999988877663
No 256
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=32.46 E-value=67 Score=26.21 Aligned_cols=19 Identities=26% Similarity=0.193 Sum_probs=16.7
Q ss_pred EEEecchhHHHHHHHHHHh
Q 040311 163 FLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~ 181 (229)
.+.|-|+|+.+++.++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 7999999999999988754
No 257
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=32.08 E-value=3.1e+02 Score=23.03 Aligned_cols=21 Identities=0% Similarity=-0.157 Sum_probs=16.8
Q ss_pred CCCcEEEEecchhHHHHHHHH
Q 040311 158 DFDNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 158 d~~ri~l~G~S~GG~la~~~a 178 (229)
+..+++|..+|.=.|+|.++.
T Consensus 252 ~~a~l~I~nDSGp~HlA~A~g 272 (322)
T PRK10964 252 AGAKAVVSVDTGLSHLTAALD 272 (322)
T ss_pred HhCCEEEecCCcHHHHHHHhC
Confidence 446899999999888887765
No 258
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=31.62 E-value=63 Score=28.61 Aligned_cols=26 Identities=19% Similarity=0.262 Sum_probs=20.4
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
++-++ ++.|.|+|+-+|+.+|.+..+
T Consensus 109 gl~p~--~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 109 GLLPR--IITGTATGALIAALVGVHTDE 134 (391)
T ss_pred CCCCc--eEEEecHHHHHHHHHHcCCHH
Confidence 55554 489999999999999986443
No 259
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=31.02 E-value=42 Score=27.41 Aligned_cols=25 Identities=16% Similarity=0.218 Sum_probs=19.8
Q ss_pred HHHHHHHHHhcchhhhcCCCCCcEEEEecch
Q 040311 139 MDALHWIKNTQDDWLMKHADFDNCFLIGSSA 169 (229)
Q Consensus 139 ~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~ 169 (229)
..|++|+.+.. +++.++++++|+|.
T Consensus 167 ~~Al~~L~~~~------~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 167 GAALRYLMERW------GIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHHH------T--GGGEEEEESSG
T ss_pred HHHHHHHHHHh------CCCHHHEEEEeCCC
Confidence 47899999885 77889999999995
No 260
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=30.90 E-value=86 Score=22.38 Aligned_cols=25 Identities=12% Similarity=0.117 Sum_probs=12.2
Q ss_pred CCEEEEEEEeCCCCCCCCCCCccEEEEEcC
Q 040311 61 KNTWVRIFVPRQALDSPSSTKLPLIVDFHG 90 (229)
Q Consensus 61 ~~~~~~i~~P~~~~~~~~~~~~pviv~iHG 90 (229)
+++.+.+..-+... ....-|+++||
T Consensus 76 ~g~~iHFih~rs~~-----~~aiPLll~HG 100 (112)
T PF06441_consen 76 DGLDIHFIHVRSKR-----PNAIPLLLLHG 100 (112)
T ss_dssp TTEEEEEEEE--S------TT-EEEEEE--
T ss_pred eeEEEEEEEeeCCC-----CCCeEEEEECC
Confidence 36777655444332 45567899999
No 261
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=30.60 E-value=76 Score=26.00 Aligned_cols=18 Identities=28% Similarity=0.176 Sum_probs=15.9
Q ss_pred EEecchhHHHHHHHHHHh
Q 040311 164 LIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 164 l~G~S~GG~la~~~a~~~ 181 (229)
+.|-|+|+-.|+.++...
T Consensus 34 i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 34 ISGASAGALAACCLLCDL 51 (245)
T ss_pred EEEEcHHHHHHHHHHhCC
Confidence 999999999999988654
No 262
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=30.50 E-value=3.8e+02 Score=28.11 Aligned_cols=83 Identities=16% Similarity=0.134 Sum_probs=46.1
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCCCCCCCCC-chHHHHHHHHHHHHHhcchhhhcCCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRLAPEHRLP-AAYDDAMDALHWIKNTQDDWLMKHAD 158 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~~~~~~~~-~~~~D~~~a~~~l~~~~~~~~~~~~d 158 (229)
...|.++|+|- . +. +...+..++.+..+. -|.+.-....| ..++++.+. -.++..+ +.
T Consensus 2121 se~~~~Ffv~p---I----EG--~tt~l~~la~rle~P----aYglQ~T~~vP~dSies~A~~---yirqirk-----vQ 2179 (2376)
T KOG1202|consen 2121 SEEPPLFFVHP---I----EG--FTTALESLASRLEIP----AYGLQCTEAVPLDSIESLAAY---YIRQIRK-----VQ 2179 (2376)
T ss_pred ccCCceEEEec---c----cc--chHHHHHHHhhcCCc----chhhhccccCCcchHHHHHHH---HHHHHHh-----cC
Confidence 45578999996 1 11 234455666554433 33332111222 345554443 2222221 22
Q ss_pred C-CcEEEEecchhHHHHHHHHHHhhh
Q 040311 159 F-DNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 159 ~-~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
| ...-|+|.|.|+-++..+|....+
T Consensus 2180 P~GPYrl~GYSyG~~l~f~ma~~Lqe 2205 (2376)
T KOG1202|consen 2180 PEGPYRLAGYSYGACLAFEMASQLQE 2205 (2376)
T ss_pred CCCCeeeeccchhHHHHHHHHHHHHh
Confidence 2 467799999999999999987755
No 263
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=29.83 E-value=1.2e+02 Score=23.53 Aligned_cols=66 Identities=20% Similarity=0.318 Sum_probs=42.1
Q ss_pred HHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 104 HEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 104 ~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
..+...+...-|+.++.+.|..+- +.. ...+++|+-... ..-+.+.+++.|.|+.-...+..+...
T Consensus 59 ~~~~~~i~~aD~li~~tPeYn~s~----pg~---lKnaiD~l~~~~-------~~~Kpv~~~~~s~g~~~~~~a~~~Lr~ 124 (184)
T COG0431 59 QALREAIAAADGLIIATPEYNGSY----PGA---LKNAIDWLSREA-------LGGKPVLLLGTSGGGAGGLRAQNQLRP 124 (184)
T ss_pred HHHHHHHHhCCEEEEECCccCCCC----CHH---HHHHHHhCCHhH-------hCCCcEEEEecCCCchhHHHHHHHHHH
Confidence 456666666678888888887653 222 345677776551 223577888888887766665555443
No 264
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=29.30 E-value=45 Score=25.49 Aligned_cols=20 Identities=20% Similarity=0.182 Sum_probs=17.0
Q ss_pred EEEEecchhHHHHHHHHHHh
Q 040311 162 CFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 162 i~l~G~S~GG~la~~~a~~~ 181 (229)
=.+.|-|+|+.+|+.++...
T Consensus 30 d~i~GtSaGAi~aa~~a~g~ 49 (175)
T cd07228 30 DIIAGSSIGALVGALYAAGH 49 (175)
T ss_pred eEEEEeCHHHHHHHHHHcCC
Confidence 46899999999999988754
No 265
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=29.11 E-value=1.6e+02 Score=24.06 Aligned_cols=40 Identities=10% Similarity=-0.089 Sum_probs=22.1
Q ss_pred ccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecC
Q 040311 82 LPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYR 124 (229)
Q Consensus 82 ~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr 124 (229)
.|.|+||.=.+- ..+...|....+....+.|+.+..++..
T Consensus 31 ~~~v~fIPtAs~---~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGV---TQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCC---CCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 466888864211 1122224444555566789988877643
No 266
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=29.10 E-value=80 Score=26.83 Aligned_cols=24 Identities=29% Similarity=0.259 Sum_probs=18.8
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
++.++ .+.|.|+|+.+|+.++.+.
T Consensus 95 ~l~~~--~i~GtSaGAi~aa~~~~~~ 118 (298)
T cd07206 95 DLLPR--VISGSSAGAIVAALLGTHT 118 (298)
T ss_pred CCCCC--EEEEEcHHHHHHHHHHcCC
Confidence 44443 4999999999999998754
No 267
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=28.57 E-value=46 Score=28.35 Aligned_cols=18 Identities=28% Similarity=0.397 Sum_probs=15.9
Q ss_pred EEEecchhHHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~ 180 (229)
.+.|.|+||-+|+.++..
T Consensus 35 ~i~GTStGgiIA~~la~g 52 (312)
T cd07212 35 WIAGTSTGGILALALLHG 52 (312)
T ss_pred EEEeeChHHHHHHHHHcC
Confidence 589999999999999863
No 268
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=28.45 E-value=1.6e+02 Score=23.82 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcchhhhcCCCCCcEEEEecchh
Q 040311 139 MDALHWIKNTQDDWLMKHADFDNCFLIGSSAG 170 (229)
Q Consensus 139 ~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~G 170 (229)
..+++|+.....+. ....-..+.++|.|.|
T Consensus 110 KNaiDwls~~~~~~--~~~~~KpvaivgaSgg 139 (219)
T TIGR02690 110 KDQIDWIPLSVGPV--RPTQGKTLAVMQVSGG 139 (219)
T ss_pred HHHHHhcccCcccc--cccCCCcEEEEEeCCc
Confidence 45666765431100 0123356888998833
No 269
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.18 E-value=50 Score=24.66 Aligned_cols=21 Identities=29% Similarity=0.146 Sum_probs=16.2
Q ss_pred cEEEEecchhHHHHHHHHHHh
Q 040311 161 NCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 161 ri~l~G~S~GG~la~~~a~~~ 181 (229)
--.+.|-|+||.+|+.++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 345899999999998888663
No 270
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.85 E-value=87 Score=26.94 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=18.9
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
++-++ ++.|.|+|+.+|+.++.+.
T Consensus 94 gl~p~--~i~GsSaGAivaa~~~~~t 117 (323)
T cd07231 94 QLLPR--VIAGSSVGSIVCAIIATRT 117 (323)
T ss_pred CCCCC--EEEEECHHHHHHHHHHcCC
Confidence 45443 4999999999999998754
No 271
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=27.79 E-value=76 Score=21.78 Aligned_cols=56 Identities=4% Similarity=-0.094 Sum_probs=30.1
Q ss_pred HHHHHhhCCcEEEEEecCCCCCC-CCCc--hHHHHHHHHHHHHHhcchhhhcCCCCCcEEEEecch
Q 040311 107 CSNVAVELPAIVVSVDYRLAPEH-RLPA--AYDDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSA 169 (229)
Q Consensus 107 ~~~~~~~~g~~vv~~dyr~~~~~-~~~~--~~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~ 169 (229)
+..+....++.|....|.-..+. .+.. ...-+..+.++|.++ +++.++|.+.|+..
T Consensus 23 a~~l~~~~~~~i~I~Ghtd~~g~~~~N~~LS~~RA~~V~~~L~~~-------gi~~~ri~~~g~G~ 81 (104)
T TIGR02802 23 AAYLKKNPSVRVTIEGHTDERGTREYNLALGERRANAVKDYLQAK-------GVSASQIETVSYGE 81 (104)
T ss_pred HHHHHHCCCcEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHc-------CCCHHHeEEEeecc
Confidence 33343334555655555432211 1111 234556667777764 78889998887643
No 272
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=27.23 E-value=1e+02 Score=27.33 Aligned_cols=19 Identities=37% Similarity=0.653 Sum_probs=15.1
Q ss_pred CCcEEEEecchhHHHHHHH
Q 040311 159 FDNCFLIGSSAGGNIAYYA 177 (229)
Q Consensus 159 ~~ri~l~G~S~GG~la~~~ 177 (229)
-++|-.+|||.||-.+..+
T Consensus 149 i~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYA 167 (405)
T ss_pred cceeeeeeeecCCeeeeEE
Confidence 4799999999999665543
No 273
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=27.14 E-value=1.1e+02 Score=22.97 Aligned_cols=19 Identities=26% Similarity=0.228 Sum_probs=15.8
Q ss_pred CcEEEEecchhHHHHHHHH
Q 040311 160 DNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 160 ~ri~l~G~S~GG~la~~~a 178 (229)
.--.+.|-|+|+.+++.++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3456899999999998887
No 274
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=26.72 E-value=36 Score=27.83 Aligned_cols=15 Identities=33% Similarity=0.541 Sum_probs=13.0
Q ss_pred CCCcEEEEecchhHH
Q 040311 158 DFDNCFLIGSSAGGN 172 (229)
Q Consensus 158 d~~ri~l~G~S~GG~ 172 (229)
+.+.|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 558999999999974
No 275
>PRK10279 hypothetical protein; Provisional
Probab=25.91 E-value=93 Score=26.39 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=18.6
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHh
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~ 181 (229)
++.+ -.++|-|+|+.++..+|...
T Consensus 31 gi~~--d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 31 GIEI--DIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred CCCc--CEEEEEcHHHHHHHHHHcCC
Confidence 4544 45899999999999988643
No 276
>PF00809 Pterin_bind: Pterin binding enzyme This Prosite entry is a subset of the Pfam family; InterPro: IPR000489 The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ]. Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (2.1.1.13 from EC), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier. Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (2.5.1.15 from EC). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate. Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. ; GO: 0042558 pteridine-containing compound metabolic process; PDB: 2VP8_B 2BMB_A 2Y5S_B 2Y5J_A 3BOF_B 1Q7Q_B 1Q85_B 1Q7Z_A 1Q7M_A 1Q8A_B ....
Probab=25.71 E-value=1.6e+02 Score=23.38 Aligned_cols=70 Identities=17% Similarity=0.089 Sum_probs=36.5
Q ss_pred HHHhhCCcEEEEEecCCCCCCCCCch---HHHHHHHHHHHHHhcchhhhcCCCCCcEEE---EecchhHHHHHHHH
Q 040311 109 NVAVELPAIVVSVDYRLAPEHRLPAA---YDDAMDALHWIKNTQDDWLMKHADFDNCFL---IGSSAGGNIAYYAG 178 (229)
Q Consensus 109 ~~~~~~g~~vv~~dyr~~~~~~~~~~---~~D~~~a~~~l~~~~~~~~~~~~d~~ri~l---~G~S~GG~la~~~a 178 (229)
.++.+.|+.++..-.+..+..--... .+=+...++|+.++.......|++.++|++ +|.+....-...+.
T Consensus 110 ~l~a~~~~~vV~m~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~l~~~Gi~~~~Ii~DPgigf~~~~~~~~~~l 185 (210)
T PF00809_consen 110 PLAAEYGAPVVLMHSDGNPKGMPETADYRLDIAEEIIEFLEERIEALEKAGIPRERIILDPGIGFGKDPEQNLELL 185 (210)
T ss_dssp HHHHHHTSEEEEESESSETTTTTSSHHHSHSHHHHHHHHHHHHHHHHHHTT--GGGEEEETTTTSSTTHHHHHHHH
T ss_pred hhhhcCCCEEEEEecccccccccccchhhhhHHHHHHHHHHHHHHHHHHcCCCHHHEeeccccCcCCCHHHHHHHH
Confidence 34456688888876664443221111 122455666777654444445888888876 46644333333333
No 277
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=25.54 E-value=72 Score=25.76 Aligned_cols=43 Identities=14% Similarity=0.002 Sum_probs=26.1
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEecCC
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVDYRL 125 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~dyr~ 125 (229)
++.+.|.||.=. .++.....|..-.+..+.+.|+.+..++-..
T Consensus 30 g~~~~i~FIPtA---s~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~ 72 (224)
T COG3340 30 GKRKTIAFIPTA---SVDSEDDFYVEKVRNALAKLGLEVSELHLSK 72 (224)
T ss_pred CCCceEEEEecC---ccccchHHHHHHHHHHHHHcCCeeeeeeccC
Confidence 346778888742 1223333355556666678899988877443
No 278
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=24.65 E-value=53 Score=29.20 Aligned_cols=20 Identities=25% Similarity=0.335 Sum_probs=17.3
Q ss_pred EEEecchhHHHHHHHHHHhh
Q 040311 163 FLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~~ 182 (229)
++.|.|+|+.+|+.++.+..
T Consensus 98 iI~GtSAGAivaalla~~t~ 117 (407)
T cd07232 98 VISGTSGGSLVAALLCTRTD 117 (407)
T ss_pred EEEEECHHHHHHHHHHcCCH
Confidence 49999999999999998544
No 279
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=24.16 E-value=3.4e+02 Score=21.46 Aligned_cols=88 Identities=14% Similarity=0.017 Sum_probs=42.4
Q ss_pred CccEEEEEcCCcccccCCCCcchHHHHHHHHhhC-CcEEEEEecCCCCC----------CCCCchHHHHHHHHHHHHHhc
Q 040311 81 KLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVEL-PAIVVSVDYRLAPE----------HRLPAAYDDAMDALHWIKNTQ 149 (229)
Q Consensus 81 ~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~-g~~vv~~dyr~~~~----------~~~~~~~~D~~~a~~~l~~~~ 149 (229)
..+.|+|+-=.+. ....|.........+. |+.+..++-.-.++ --.+. -+....++++++..
T Consensus 30 ~~~~i~~IptAs~-----~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~G--G~~~~~~~~l~~~~ 102 (212)
T cd03146 30 ARPKVLFVPTASG-----DRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGG--GNTFNLLAQWREHG 102 (212)
T ss_pred CCCeEEEECCCCC-----CHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECC--chHHHHHHHHHHcC
Confidence 4566777764221 1222444455555678 88887776321100 00011 23334444444432
Q ss_pred -chhhhcCCCCCcEEEEecchhHHHHHH
Q 040311 150 -DDWLMKHADFDNCFLIGSSAGGNIAYY 176 (229)
Q Consensus 150 -~~~~~~~~d~~ri~l~G~S~GG~la~~ 176 (229)
.+.++... .+...++|-|+|+.+...
T Consensus 103 l~~~l~~~~-~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 103 LDAILKAAL-ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHHHH-HCCCEEEEECHhHHhhCC
Confidence 11010011 135779999999987665
No 280
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=24.04 E-value=41 Score=28.67 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=15.4
Q ss_pred CCCCCcEEEEecchhHHHH
Q 040311 156 HADFDNCFLIGSSAGGNIA 174 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la 174 (229)
+-.+.-|+++|+|+|+|.-
T Consensus 8 ~s~~~g~i~~gds~~ahf~ 26 (305)
T cd01826 8 NSQPMGVILLGDSAGAHFH 26 (305)
T ss_pred CCCCceEEEeccccccccc
Confidence 4566779999999999864
No 281
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=23.92 E-value=67 Score=26.36 Aligned_cols=20 Identities=30% Similarity=0.127 Sum_probs=17.1
Q ss_pred EEEecchhHHHHHHHHHHhh
Q 040311 163 FLIGSSAGGNIAYYAGLRAT 182 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~~ 182 (229)
.+.|-|+|+.+++.++....
T Consensus 30 ~i~GtSaGAi~a~~~~~g~~ 49 (266)
T cd07208 30 LVIGVSAGALNAASYLSGQR 49 (266)
T ss_pred EEEEECHHHHhHHHHHhCCc
Confidence 58999999999999887643
No 282
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=23.50 E-value=67 Score=26.87 Aligned_cols=19 Identities=37% Similarity=0.394 Sum_probs=16.6
Q ss_pred EEEecchhHHHHHHHHHHh
Q 040311 163 FLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~ 181 (229)
.+.|-|+||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5899999999999998753
No 283
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=23.49 E-value=60 Score=27.37 Aligned_cols=17 Identities=35% Similarity=0.769 Sum_probs=15.2
Q ss_pred EEEecchhHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~ 179 (229)
.+.|-|.||-+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 48999999999999885
No 284
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=23.47 E-value=1.8e+02 Score=20.72 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=19.4
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEe
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVD 122 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~d 122 (229)
+..++|||+..||.. ...+..++...|+.|..++
T Consensus 85 ~~~~vvvyC~~~G~r---------s~~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 85 RDPKLLIYCARGGMR---------SQSLAWLLESLGIDVPLLE 118 (128)
T ss_pred CCCeEEEEeCCCCcc---------HHHHHHHHHHcCCceeEeC
Confidence 456899999633321 1123344556798765543
No 285
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=23.03 E-value=68 Score=25.51 Aligned_cols=19 Identities=16% Similarity=0.095 Sum_probs=17.0
Q ss_pred EEEecchhHHHHHHHHHHh
Q 040311 163 FLIGSSAGGNIAYYAGLRA 181 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~~ 181 (229)
.+.|.|+|+-+|+.++...
T Consensus 29 ~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 29 IISGTSIGAINGALIAGGD 47 (215)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 6899999999999998765
No 286
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=22.97 E-value=5.7e+02 Score=23.15 Aligned_cols=109 Identities=20% Similarity=0.181 Sum_probs=64.1
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEE--Ee-cCCC-----------------CCCCCCchHHHHH
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVS--VD-YRLA-----------------PEHRLPAAYDDAM 139 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~--~d-yr~~-----------------~~~~~~~~~~D~~ 139 (229)
.+.|.||++-| .-|+........++..+- +.|..|.. .| ||-+ +...-....+=+.
T Consensus 97 ~~~P~vImmvG---LQGsGKTTt~~KLA~~lk-k~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak 172 (451)
T COG0541 97 KKPPTVILMVG---LQGSGKTTTAGKLAKYLK-KKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAK 172 (451)
T ss_pred CCCCeEEEEEe---ccCCChHhHHHHHHHHHH-HcCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHH
Confidence 45688888887 223333222233444443 46765544 44 6632 1111123344456
Q ss_pred HHHHHHHHhcchh---------------------hhcCCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe
Q 040311 140 DALHWIKNTQDDW---------------------LMKHADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL 198 (229)
Q Consensus 140 ~a~~~l~~~~~~~---------------------~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il 198 (229)
.++++..++..+. +..-+.|+.+.++=+|+=|.-|...|..+.+ ...+.|+|+
T Consensus 173 ~al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e------~l~itGvIl 246 (451)
T COG0541 173 AALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNE------ALGITGVIL 246 (451)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhh------hcCCceEEE
Confidence 6777766652100 2234788999999999999999999988866 235778887
No 287
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=22.84 E-value=2e+02 Score=21.70 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=20.6
Q ss_pred CCCCCcEEEEecchhHHHHHHHHHHhhhhcCCCCCcceeEEEe-cccc
Q 040311 156 HADFDNCFLIGSSAGGNIAYYAGLRATAQVNNLLPLKIKGLLL-FPFF 202 (229)
Q Consensus 156 ~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~v~g~il-~P~~ 202 (229)
.+++++|++...+..|...+..+...+. .++++ .|..
T Consensus 114 ~~~pd~Ivvt~Ga~~al~~l~~~l~dpG----------D~VlVp~P~Y 151 (153)
T PLN02994 114 KFDADMIVLSAGATAANEIIMFCIADPG----------DAFLVPTPYY 151 (153)
T ss_pred ccchhheEEcCCHHHHHHHHHHHHcCCC----------CEEEEeCCCC
Confidence 3688898887555544433333332222 36666 7765
No 288
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=22.74 E-value=1.4e+02 Score=24.49 Aligned_cols=20 Identities=30% Similarity=0.194 Sum_probs=16.0
Q ss_pred CCCCcEEEEecchhHHHHHHHH
Q 040311 157 ADFDNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 157 ~d~~ri~l~G~S~GG~la~~~a 178 (229)
+.| -+++|||+|=..|+.++
T Consensus 82 i~p--~~v~GhS~GE~aAa~~a 101 (290)
T TIGR00128 82 LKP--DFAAGHSLGEYSALVAA 101 (290)
T ss_pred CCC--CEEeecCHHHHHHHHHh
Confidence 655 47999999998777766
No 289
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=22.51 E-value=4.9e+02 Score=22.25 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=31.4
Q ss_pred cCCCCCCCCCchH----HHHHHHHHHHHHhcchhhhcCCC-CCcEEEEecchhHHHHHHH-HHHhh
Q 040311 123 YRLAPEHRLPAAY----DDAMDALHWIKNTQDDWLMKHAD-FDNCFLIGSSAGGNIAYYA-GLRAT 182 (229)
Q Consensus 123 yr~~~~~~~~~~~----~D~~~a~~~l~~~~~~~~~~~~d-~~ri~l~G~S~GG~la~~~-a~~~~ 182 (229)
|.++|+...-..+ .....+++++.+...++..--+| |.+|=+.-.|+-|.+.... |...+
T Consensus 83 Y~LGPNGgI~TsLNLF~tk~dqv~~~iek~~~~~~~~liDTPGQIE~FtWSAsGsIIte~lass~p 148 (366)
T KOG1532|consen 83 YQLGPNGGIVTSLNLFATKFDQVIELIEKRAEEFDYVLIDTPGQIEAFTWSASGSIITETLASSFP 148 (366)
T ss_pred hCCCCCcchhhhHHHHHHHHHHHHHHHHHhhcccCEEEEcCCCceEEEEecCCccchHhhHhhcCC
Confidence 4456665554433 22333444444444332111244 6788888889888876654 44333
No 290
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=21.88 E-value=1.7e+02 Score=23.13 Aligned_cols=50 Identities=14% Similarity=0.118 Sum_probs=31.3
Q ss_pred CCccEEEEEcCCcccccCCCCcchHHHHHHHHhhCCcEEEEEe-----cCCCCCCCCCc
Q 040311 80 TKLPLIVDFHGGGFIFFSAASSLSHEFCSNVAVELPAIVVSVD-----YRLAPEHRLPA 133 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~g~~~~~~~~~~~~~~~~~~g~~vv~~d-----yr~~~~~~~~~ 133 (229)
...|.+||+-| .+|+..+..-..+...+ .+.|+.+...| ..++.+-.|..
T Consensus 20 ~~~~~viW~TG---LSGsGKSTiA~ale~~L-~~~G~~~y~LDGDnvR~gL~~dLgFs~ 74 (197)
T COG0529 20 GQKGAVIWFTG---LSGSGKSTIANALEEKL-FAKGYHVYLLDGDNVRHGLNRDLGFSR 74 (197)
T ss_pred CCCCeEEEeec---CCCCCHHHHHHHHHHHH-HHcCCeEEEecChhHhhcccCCCCCCh
Confidence 45689999999 44554443222333444 46799999998 33556666653
No 291
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.46 E-value=1.1e+02 Score=23.69 Aligned_cols=34 Identities=9% Similarity=0.221 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHH
Q 040311 137 DAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAG 178 (229)
Q Consensus 137 D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a 178 (229)
+..++++|..... ..+.|+|+|||-=|++.+.+.
T Consensus 66 ~~~asleyAv~~L--------~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 66 NCLSVLQYAVDVL--------KVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred chhhhHHHHHHhc--------CCCEEEEecCCCchHHHHHHc
Confidence 4678888887764 336999999998777666543
No 292
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.26 E-value=1.5e+02 Score=25.48 Aligned_cols=17 Identities=24% Similarity=0.045 Sum_probs=14.2
Q ss_pred EEEecchhHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~ 179 (229)
+++|||+|=..|+.++-
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 68999999988877763
No 293
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.15 E-value=63 Score=27.30 Aligned_cols=17 Identities=41% Similarity=0.591 Sum_probs=15.1
Q ss_pred EEEecchhHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~ 179 (229)
.++|-|.||-+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68999999999998873
No 294
>TIGR02806 clostrip clostripain. Clostripain is a cysteine protease characterized from Clostridium histolyticum, and also known from Clostridium perfringens. It is a heterodimer processed from a single precursor polypeptide, specific for Arg-|-Xaa peptide bonds. The older term alpha-clostripain refers to the most active, most reduced form, rather than to the product of one of several different genes. Clostripain belongs to the peptidase family C11, or clostripain family (see pfam03415).
Probab=21.05 E-value=67 Score=29.00 Aligned_cols=16 Identities=44% Similarity=0.499 Sum_probs=13.8
Q ss_pred CCccEEEEEcCCcccc
Q 040311 80 TKLPLIVDFHGGGFIF 95 (229)
Q Consensus 80 ~~~pviv~iHGGg~~~ 95 (229)
..+-+|++-||+||..
T Consensus 113 d~Y~LIiwnHG~GW~p 128 (476)
T TIGR02806 113 DKYMLIMANHGGGAKD 128 (476)
T ss_pred cceeEEEEeCCCCCcC
Confidence 5678999999999973
No 295
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=21.04 E-value=76 Score=26.96 Aligned_cols=18 Identities=22% Similarity=0.198 Sum_probs=16.1
Q ss_pred EEEecchhHHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~ 180 (229)
.++|-|+|+.+++.++..
T Consensus 46 ~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 46 MVGGTSIGAFIGALYAEE 63 (306)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 589999999999999875
No 296
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=20.57 E-value=73 Score=27.59 Aligned_cols=17 Identities=29% Similarity=0.430 Sum_probs=15.5
Q ss_pred EEEecchhHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~ 179 (229)
.++|-|.||-+|+.++.
T Consensus 46 liaGTStGgiiA~~la~ 62 (349)
T cd07214 46 VIAGTSTGGLITAMLTA 62 (349)
T ss_pred EEeeCCHHHHHHHHHhc
Confidence 58999999999999986
No 297
>PLN03006 carbonate dehydratase
Probab=20.44 E-value=1.2e+02 Score=25.91 Aligned_cols=32 Identities=31% Similarity=0.417 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHH
Q 040311 138 AMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYA 177 (229)
Q Consensus 138 ~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~ 177 (229)
+.++++|..... ..+.|+|+|||.=|++.+.+
T Consensus 158 ~~aSLEYAV~~L--------~V~~IVV~GHs~CGaV~Aal 189 (301)
T PLN03006 158 TKAALEFSVNTL--------NVENILVIGHSRCGGIQALM 189 (301)
T ss_pred hhhhHHHHHHHh--------CCCEEEEecCCCchHHHHHh
Confidence 677889888765 33799999999877766544
No 298
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.35 E-value=49 Score=30.22 Aligned_cols=22 Identities=36% Similarity=0.551 Sum_probs=18.7
Q ss_pred EEEEecchhHHHHHHHHHHhhh
Q 040311 162 CFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 162 i~l~G~S~GG~la~~~a~~~~~ 183 (229)
=++.|.|+||-+|..++.+..+
T Consensus 204 ~IIsGsS~GaivAsl~~v~~~e 225 (543)
T KOG2214|consen 204 NIISGSSAGAIVASLVGVRSNE 225 (543)
T ss_pred hhhcCCchhHHHHHHHhhcchH
Confidence 3589999999999999987755
No 299
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.30 E-value=82 Score=27.29 Aligned_cols=17 Identities=41% Similarity=0.526 Sum_probs=15.6
Q ss_pred EEEecchhHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGL 179 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~ 179 (229)
.+.|-|.||-+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 58999999999999986
No 300
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.19 E-value=81 Score=25.76 Aligned_cols=18 Identities=39% Similarity=0.556 Sum_probs=16.2
Q ss_pred EEEecchhHHHHHHHHHH
Q 040311 163 FLIGSSAGGNIAYYAGLR 180 (229)
Q Consensus 163 ~l~G~S~GG~la~~~a~~ 180 (229)
.+.|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 489999999999999876
No 301
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=20.14 E-value=2.4e+02 Score=25.28 Aligned_cols=43 Identities=7% Similarity=0.089 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHHHHHHHHhhh
Q 040311 136 DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIAYYAGLRATA 183 (229)
Q Consensus 136 ~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~ 183 (229)
+.+..-+...+.+.. ..||+|+++.+.+.+++=+++..+..+.
T Consensus 128 qa~A~Fm~~~r~~~v-----~fdP~~~Vv~~G~T~ane~l~fcLadpg 170 (471)
T KOG0256|consen 128 QAVAEFMERARGNRV-----KFDPERVVVTNGATSANETLMFCLADPG 170 (471)
T ss_pred HHHHHHHHHHhCCCC-----ccCccceEEecccchhhHHHHHHhcCCC
Confidence 333444444444332 4799999999999999988887766654
No 302
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.08 E-value=1.2e+02 Score=21.68 Aligned_cols=31 Identities=13% Similarity=0.290 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhcchhhhcCCCCCcEEEEecchhHHHH
Q 040311 136 DDAMDALHWIKNTQDDWLMKHADFDNCFLIGSSAGGNIA 174 (229)
Q Consensus 136 ~D~~~a~~~l~~~~~~~~~~~~d~~ri~l~G~S~GG~la 174 (229)
.++...++|..... ..+.|+++|||--|++.
T Consensus 43 ~~~~~sl~~av~~l--------~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 43 LDVLASLEYAVEVL--------GVKHIIVCGHTDCGAVK 73 (119)
T ss_pred ccHHHHHHHHHHhh--------CCCEEEEEccCCCcHHH
Confidence 46777888877654 34699999998776655
No 303
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=20.03 E-value=3.1e+02 Score=18.91 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=26.7
Q ss_pred HHHHHHHHhhCCcEEEEEecCCCCCCCCCchHHHHHHHHHHHHH
Q 040311 104 HEFCSNVAVELPAIVVSVDYRLAPEHRLPAAYDDAMDALHWIKN 147 (229)
Q Consensus 104 ~~~~~~~~~~~g~~vv~~dyr~~~~~~~~~~~~D~~~a~~~l~~ 147 (229)
..+++.++...++.++.++...............+...++.+.+
T Consensus 12 T~l~~~la~~l~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~ 55 (132)
T PF00004_consen 12 TTLARALAQYLGFPFIEIDGSELISSYAGDSEQKIRDFFKKAKK 55 (132)
T ss_dssp HHHHHHHHHHTTSEEEEEETTHHHTSSTTHHHHHHHHHHHHHHH
T ss_pred eHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence 35778888888988888886643322333444555555555443
Done!