Your job contains 1 sequence.
>040317
MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPFVNRLGDHLNEE
GVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRNYCSYNR
GCPHQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040317
(125 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043894 - symbol:AT2G43880 species:3702 "Arabi... 150 3.4e-16 2
TAIR|locus:2031963 - symbol:AT1G05660 species:3702 "Arabi... 126 2.0e-15 2
TAIR|locus:2031953 - symbol:AT1G05650 species:3702 "Arabi... 135 3.6e-15 2
TAIR|locus:2051764 - symbol:AT2G43890 species:3702 "Arabi... 127 1.0e-14 2
TAIR|locus:2080422 - symbol:AT3G59850 species:3702 "Arabi... 128 1.4e-13 2
TAIR|locus:2043924 - symbol:AT2G43870 species:3702 "Arabi... 110 1.2e-11 2
TAIR|locus:2034131 - symbol:AT1G65570 species:3702 "Arabi... 91 1.4e-10 2
TAIR|locus:2043974 - symbol:AT2G43860 species:3702 "Arabi... 95 6.6e-08 2
TAIR|locus:2156314 - symbol:AT5G44830 species:3702 "Arabi... 73 8.1e-07 2
TAIR|locus:2155292 - symbol:AT5G44840 species:3702 "Arabi... 68 4.0e-06 2
TAIR|locus:2077407 - symbol:QRT2 "QUARTET 2" species:3702... 73 1.4e-05 2
TAIR|locus:2016314 - symbol:AT1G80170 species:3702 "Arabi... 68 2.4e-05 2
TAIR|locus:2128023 - symbol:AT4G35670 species:3702 "Arabi... 66 3.7e-05 2
TAIR|locus:2146370 - symbol:AT5G27530 species:3702 "Arabi... 69 4.1e-05 2
TAIR|locus:504955462 - symbol:AT4G32375 species:3702 "Ara... 64 6.2e-05 2
UNIPROTKB|Q6H9K0 - symbol:plaa2 "Exopolygalacturonase" sp... 71 8.0e-05 2
TAIR|locus:2027534 - symbol:AT1G56710 species:3702 "Arabi... 70 9.2e-05 2
TAIR|locus:2077442 - symbol:AT3G07850 species:3702 "Arabi... 74 9.4e-05 2
TAIR|locus:2141877 - symbol:AT4G18180 species:3702 "Arabi... 65 0.00011 2
TAIR|locus:2103478 - symbol:ADPG1 species:3702 "Arabidops... 67 0.00015 2
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 80 0.00017 2
TAIR|locus:2054396 - symbol:PGAZAT "polygalacturonase abs... 71 0.00018 2
TAIR|locus:2088252 - symbol:AT3G14040 species:3702 "Arabi... 71 0.00020 2
TAIR|locus:2088842 - symbol:AT3G26610 species:3702 "Arabi... 66 0.00037 2
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 72 0.00057 2
TAIR|locus:2036581 - symbol:AT1G60590 species:3702 "Arabi... 70 0.00063 2
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 66 0.00070 2
TAIR|locus:2024680 - symbol:PGA4 "polygalacturonase 4" sp... 60 0.00076 2
TAIR|locus:2077412 - symbol:AT3G07830 species:3702 "Arabi... 59 0.00084 2
TAIR|locus:2077437 - symbol:AT3G07840 species:3702 "Arabi... 61 0.00085 2
TAIR|locus:2026795 - symbol:AT1G70500 species:3702 "Arabi... 62 0.00096 2
>TAIR|locus:2043894 [details] [associations]
symbol:AT2G43880 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC004005
IPI:IPI00519414 PIR:T00668 RefSeq:NP_181916.1 UniGene:At.36829
ProteinModelPortal:Q9SLM8 SMR:Q9SLM8 PaxDb:Q9SLM8 PRIDE:Q9SLM8
EnsemblPlants:AT2G43880.1 GeneID:818992 KEGG:ath:AT2G43880
TAIR:At2g43880 InParanoid:Q9SLM8 OMA:GDYANEE PhylomeDB:Q9SLM8
ProtClustDB:CLSN2912912 ArrayExpress:Q9SLM8 Genevestigator:Q9SLM8
Uniprot:Q9SLM8
Length = 394
Score = 150 (57.9 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 28/76 (36%), Positives = 34/76 (44%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LGD+ NEEG GVRIK WARP G+ N+ FR
Sbjct: 247 IGSLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPV 306
Query: 110 XXDRNYCSYNRGCPHQ 125
D+NYC +GCP Q
Sbjct: 307 IIDQNYCPNGKGCPRQ 322
Score = 79 (32.9 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+ ++H S++ I NV+I P+ SP TDGI +Q
Sbjct: 174 VTVHHSSNVRIENVRIRAPSGSPNTDGIHVQ 204
>TAIR|locus:2031963 [details] [associations]
symbol:AT1G05660 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC007153 ProtClustDB:PLN02155 IPI:IPI00535049 PIR:G86190
RefSeq:NP_172057.1 UniGene:At.51493 UniGene:At.69599
ProteinModelPortal:Q9SYK7 SMR:Q9SYK7 EnsemblPlants:AT1G05660.1
GeneID:837073 KEGG:ath:AT1G05660 TAIR:At1g05660 InParanoid:Q9SYK7
OMA:CPTHEGC PhylomeDB:Q9SYK7 Genevestigator:Q9SYK7 Uniprot:Q9SYK7
Length = 394
Score = 126 (49.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 24/76 (31%), Positives = 33/76 (43%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ L L E+G GVRIK WARP NG+ R + F+
Sbjct: 244 IGSLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPI 303
Query: 110 XXDRNYCSYNRGCPHQ 125
D+NYC + GCP++
Sbjct: 304 IIDQNYCPTHEGCPNE 319
Score = 97 (39.2 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
M +N C+++++RNVK++ P NSP TDG +Q
Sbjct: 171 MTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQ 201
Score = 30 (15.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 1 MAINHCSDILIRNVK 15
++ N D++I VK
Sbjct: 148 ISFNSAKDVIISGVK 162
>TAIR|locus:2031953 [details] [associations]
symbol:AT1G05650 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC007153 IPI:IPI00525299 PIR:F86190 RefSeq:NP_172056.1
UniGene:At.51492 ProteinModelPortal:Q9SYK6 SMR:Q9SYK6 PaxDb:Q9SYK6
PRIDE:Q9SYK6 EnsemblPlants:AT1G05650.1 GeneID:837072
KEGG:ath:AT1G05650 TAIR:At1g05650 InParanoid:Q9SYK6 OMA:TRNFLIS
PhylomeDB:Q9SYK6 ProtClustDB:PLN02155 Genevestigator:Q9SYK6
Uniprot:Q9SYK6
Length = 394
Score = 135 (52.6 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ L LNE+G GVRIK WARP G+ RN+ F+
Sbjct: 244 IGSLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPI 303
Query: 110 XXDRNYCSYNRGCP 123
D+NYC N+GCP
Sbjct: 304 IIDQNYCPSNQGCP 317
Score = 85 (35.0 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
M +N C+++ +RN++++ P +SP TDG +Q
Sbjct: 171 MTLNGCTNVAVRNIRLVAPGDSPNTDGFTVQ 201
Score = 31 (16.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTT 25
++ N D++I VK ++ S T
Sbjct: 148 ISFNSAKDVIISGVKSMNSQVSHMT 172
>TAIR|locus:2051764 [details] [associations]
symbol:AT2G43890 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC004005
EMBL:DQ056578 IPI:IPI00519700 PIR:T00669 RefSeq:NP_181917.1
UniGene:At.53115 ProteinModelPortal:O80559 SMR:O80559 PRIDE:O80559
EnsemblPlants:AT2G43890.1 GeneID:818993 KEGG:ath:AT2G43890
TAIR:At2g43890 InParanoid:O80559 OMA:RNVLFQN PhylomeDB:O80559
ProtClustDB:CLSN2683098 ArrayExpress:O80559 Genevestigator:O80559
Uniprot:O80559
Length = 392
Score = 127 (49.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 26/76 (34%), Positives = 32/76 (42%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG NE G GVRIK WAR G+ RN+ F+
Sbjct: 245 IGSLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPI 304
Query: 110 XXDRNYCSYNRGCPHQ 125
D+NYC N+GCP Q
Sbjct: 305 IVDQNYCPSNQGCPKQ 320
Score = 89 (36.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+ IN C+++++R VK++ P SP TDG+ +Q
Sbjct: 172 LVINSCNNVIVRKVKLVAPDQSPNTDGLHVQ 202
>TAIR|locus:2080422 [details] [associations]
symbol:AT3G59850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
ProtClustDB:CLSN2716978 EMBL:BT015766 EMBL:BT020180 IPI:IPI00538167
RefSeq:NP_191544.2 UniGene:At.34545 ProteinModelPortal:Q5XF50
STRING:Q5XF50 EnsemblPlants:AT3G59850.1 GeneID:825155
KEGG:ath:AT3G59850 TAIR:At3g59850 InParanoid:Q5XF50 OMA:WAKACAS
PhylomeDB:Q5XF50 Genevestigator:Q5XF50 Uniprot:Q5XF50
Length = 388
Score = 128 (50.1 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 27/76 (35%), Positives = 33/76 (43%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG E G GVRIK WARP NG+A+NI F+
Sbjct: 241 IGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPI 300
Query: 110 XXDRNYCSYNRGCPHQ 125
D+NYC N CP+Q
Sbjct: 301 VIDQNYCPGNENCPNQ 316
Score = 77 (32.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+AIN CS++ + VK+ NSP TDGI +Q
Sbjct: 168 VAINGCSNVKLDGVKVSADGNSPNTDGIHVQ 198
>TAIR|locus:2043924 [details] [associations]
symbol:AT2G43870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ446620 IPI:IPI00544593 PIR:E84871 RefSeq:NP_181915.1
UniGene:At.53114 HSSP:P26509 ProteinModelPortal:O22817 SMR:O22817
EnsemblPlants:AT2G43870.1 GeneID:818991 KEGG:ath:AT2G43870
TAIR:At2g43870 InParanoid:O22817 OMA:KTTWFTG PhylomeDB:O22817
ProtClustDB:CLSN2716978 ArrayExpress:O22817 Genevestigator:O22817
Uniprot:O22817
Length = 384
Score = 110 (43.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 25/76 (32%), Positives = 32/76 (42%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG E G GVRIK WARP +G+A+NI F+
Sbjct: 239 IGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPI 298
Query: 110 XXDRNYCSYNRGCPHQ 125
D+NYC + CP Q
Sbjct: 299 IIDQNYCP-DHDCPRQ 313
Score = 77 (32.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+ IN C+++ ++ VK++ NSP TDGI +Q
Sbjct: 166 VVINGCNNVKLQGVKVLAAGNSPNTDGIHVQ 196
>TAIR|locus:2034131 [details] [associations]
symbol:AT1G65570 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GO:GO:0009506 GO:GO:0005576
GO:GO:0005975 CAZy:GH28 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 EMBL:AC001229
EMBL:DQ446397 IPI:IPI00540193 PIR:F96680 RefSeq:NP_176735.1
UniGene:At.52380 ProteinModelPortal:O04474 PRIDE:O04474
EnsemblPlants:AT1G65570.1 GeneID:842868 KEGG:ath:AT1G65570
TAIR:At1g65570 InParanoid:O04474 OMA:ITIIMSH PhylomeDB:O04474
ProtClustDB:CLSN2913520 ArrayExpress:O04474 Genevestigator:O04474
Uniprot:O04474
Length = 397
Score = 91 (37.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 19/76 (25%), Positives = 27/76 (35%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ L + E+G G+RIK W R NG+ + F
Sbjct: 250 IGSLAKSIEEQGVENVTVKNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYPI 309
Query: 110 XXDRNYCSYNRGCPHQ 125
D+NYC + CP Q
Sbjct: 310 LIDQNYCPGDSSCPSQ 325
Score = 87 (35.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+AIN C +I I +V+II P SP TDGI +Q
Sbjct: 177 IAINRCRNIKIEDVRIIAPDESPNTDGIHIQ 207
>TAIR|locus:2043974 [details] [associations]
symbol:AT2G43860 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ056577 IPI:IPI00540510 PIR:D84871 RefSeq:NP_181914.1
UniGene:At.53113 ProteinModelPortal:O22818 SMR:O22818 PRIDE:O22818
EnsemblPlants:AT2G43860.1 GeneID:818990 KEGG:ath:AT2G43860
GeneFarm:16 TAIR:At2g43860 InParanoid:O22818 OMA:CASANPT
PhylomeDB:O22818 ProtClustDB:CLSN2912911 Genevestigator:O22818
Uniprot:O22818
Length = 405
Score = 95 (38.5 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/76 (28%), Positives = 31/76 (40%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG E+G GVRIK W + N +ARNI F+
Sbjct: 252 IGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPI 311
Query: 110 XXDRNYCSYNRGCPHQ 125
D++YC + + CP Q
Sbjct: 312 IIDQHYCLH-KPCPKQ 326
Score = 57 (25.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+ I++ +++ I VK+ NSP TDGI ++
Sbjct: 179 IVIDNSNNVNIDGVKVSADENSPNTDGIHVE 209
>TAIR|locus:2156314 [details] [associations]
symbol:AT5G44830 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AB016874 ProtClustDB:CLSN2687281
IPI:IPI00516336 RefSeq:NP_199296.1 UniGene:At.55365
ProteinModelPortal:Q9FIY9 SMR:Q9FIY9 STRING:Q9FIY9
EnsemblPlants:AT5G44830.1 GeneID:834513 KEGG:ath:AT5G44830
TAIR:At5g44830 InParanoid:Q9FIY9 OMA:INTNDAN PhylomeDB:Q9FIY9
Genevestigator:Q9FIY9 Uniprot:Q9FIY9
Length = 332
Score = 73 (30.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNR 120
GVRIK W + GYARNI F+ D+NY R
Sbjct: 212 GVRIKTWPNGK-GYARNILFKDLTFRESKNPIIIDQNYVDKGR 253
Score = 67 (28.6 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
++I+ C + + +K++ P +SP TDGI +
Sbjct: 111 ISISECKRVQLTKIKLVAPEDSPNTDGINI 140
>TAIR|locus:2155292 [details] [associations]
symbol:AT5G44840 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB010693
EMBL:AC002342 IPI:IPI00532756 RefSeq:NP_199297.1 UniGene:At.55366
ProteinModelPortal:O48576 SMR:O48576 STRING:O48576
EnsemblPlants:AT5G44840.1 GeneID:834514 KEGG:ath:AT5G44840
TAIR:At5g44840 InParanoid:O48576 OMA:NANEANG PhylomeDB:O48576
ProtClustDB:CLSN2687281 Genevestigator:O48576 Uniprot:O48576
Length = 381
Score = 68 (29.0 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
++I+ C + I +K++ P +SP TDGI +
Sbjct: 160 ISISECKRVKITKIKLVAPHDSPNTDGINI 189
Score = 67 (28.6 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNR 120
G RIK W + GYA+NI F+ D+NY R
Sbjct: 261 GARIKTWPNGK-GYAKNILFKSLTFRETKNPIIIDQNYVDKGR 302
>TAIR|locus:2077407 [details] [associations]
symbol:QRT2 "QUARTET 2" species:3702 "Arabidopsis
thaliana" [GO:0004650 "polygalacturonase activity"
evidence=IEA;ISS;IDA] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA;ISS] [GO:0009830 "cell wall modification involved in
abscission" evidence=TAS] [GO:0009901 "anther dehiscence"
evidence=IMP] [GO:0010047 "fruit dehiscence" evidence=IMP]
[GO:0048235 "pollen sperm cell differentiation" evidence=IMP]
[GO:0045490 "pectin catabolic process" evidence=IMP]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0045490
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
GO:GO:0009901 GO:GO:0009830 GO:GO:0010047 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 GO:GO:0048235
IPI:IPI00516594 RefSeq:NP_187454.2 UniGene:At.40276
ProteinModelPortal:Q9SFB7 SMR:Q9SFB7 STRING:Q9SFB7
EnsemblPlants:AT3G07970.1 GeneID:819988 KEGG:ath:AT3G07970
TAIR:At3g07970 InParanoid:Q9SFB7 OMA:NIRLENA PhylomeDB:Q9SFB7
ProtClustDB:CLSN2690525 Genevestigator:Q9SFB7 Uniprot:Q9SFB7
Length = 439
Score = 73 (30.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/76 (25%), Positives = 29/76 (38%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG+ +E GVRIK W + +G A+NI F+
Sbjct: 292 IGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTW-QGGHGMAKNIIFQDIIMKNVTNPI 350
Query: 110 XXDRNYCSYNRGCPHQ 125
+++YC CP Q
Sbjct: 351 IINQDYCDRVEACPEQ 366
Score = 58 (25.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
+ C ++ N+ + P +SP TDGI +
Sbjct: 219 LTFQDCKNVKALNLMVTSPADSPNTDGIHV 248
>TAIR|locus:2016314 [details] [associations]
symbol:AT1G80170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC009322 EMBL:AY046002
EMBL:AY142668 IPI:IPI00518842 PIR:D96833 RefSeq:NP_565232.1
UniGene:At.11620 ProteinModelPortal:Q94AJ5 SMR:Q94AJ5 IntAct:Q94AJ5
STRING:Q94AJ5 EnsemblPlants:AT1G80170.1 GeneID:844357
KEGG:ath:AT1G80170 GeneFarm:519 TAIR:At1g80170 InParanoid:Q94AJ5
OMA:KWLYFHG PhylomeDB:Q94AJ5 ProtClustDB:PLN02793
Genevestigator:Q94AJ5 Uniprot:Q94AJ5
Length = 444
Score = 68 (29.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
+A+ C + I +K+I P SP TDGI +
Sbjct: 203 IALTSCRRVTISGLKVIAPATSPNTDGIHI 232
Score = 61 (26.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNRGCPHQ 125
GVRIK W + +G I FR D+ YC + C +Q
Sbjct: 304 GVRIKTW-QGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQ 350
>TAIR|locus:2128023 [details] [associations]
symbol:AT4G35670 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00518919 RefSeq:NP_195292.2
UniGene:At.54617 ProteinModelPortal:F4JN47 SMR:F4JN47
EnsemblPlants:AT4G35670.1 GeneID:829719 KEGG:ath:AT4G35670
OMA:DSTNINI Uniprot:F4JN47
Length = 394
Score = 66 (28.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
++I C+ + I N+ + P SP TDGI +
Sbjct: 170 ISIKTCNTVAISNINLFAPETSPNTDGIDI 199
Score = 60 (26.2 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNR 120
G RIK W + GYARNI+F D++Y R
Sbjct: 271 GARIKTWLGGQ-GYARNISFTDITLVNTKNPIIIDQHYIDKGR 312
>TAIR|locus:2146370 [details] [associations]
symbol:AT5G27530 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00518530 RefSeq:NP_198105.2 UniGene:At.55039
ProteinModelPortal:F4K4C2 EnsemblPlants:AT5G27530.1 GeneID:832813
KEGG:ath:AT5G27530 OMA:CKSTSIK PhylomeDB:F4K4C2 Uniprot:F4K4C2
Length = 458
Score = 69 (29.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
++I +C + I + I+ P NSP TDGI +
Sbjct: 189 ISIKNCHYVAISKINILAPENSPNTDGIDI 218
Score = 58 (25.5 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNY 115
G RIK W + GYARNI+F D+ Y
Sbjct: 290 GARIKTW-QGGQGYARNISFENITLINVQNPIIIDQQY 326
>TAIR|locus:504955462 [details] [associations]
symbol:AT4G32375 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] InterPro:IPR000743
Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00531203 RefSeq:NP_680757.1 UniGene:At.54578
ProteinModelPortal:F4JUA4 SMR:F4JUA4 PRIDE:F4JUA4
EnsemblPlants:AT4G32375.1 GeneID:829372 KEGG:ath:AT4G32375
OMA:KPPTMFP Uniprot:F4JUA4
Length = 486
Score = 64 (27.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
++I C+++ + N +I P +SP TDGI +
Sbjct: 134 ISILDCTNVTLSNFHLIAPKDSPNTDGIDI 163
Score = 62 (26.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 14/46 (30%), Positives = 19/46 (41%)
Query: 78 GVRIKLWA-RPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNRGC 122
G RIK W R G A+NI + D++YC+ C
Sbjct: 235 GARIKTWTVRGGLGVAKNILYENITLTDTKYPIIIDQHYCNGGHNC 280
>UNIPROTKB|Q6H9K0 [details] [associations]
symbol:plaa2 "Exopolygalacturonase" species:140101
"Platanus x acerifolia" [GO:0005575 "cellular_component"
evidence=ND] [GO:0019863 "IgE binding" evidence=IDA] [GO:0045490
"pectin catabolic process" evidence=IDA] [GO:0047911 "galacturan
1,4-alpha-galacturonidase activity" evidence=IDA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 GO:GO:0045490 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0019863
GO:GO:0047911 EMBL:AJ586898 ProteinModelPortal:Q6H9K0
Allergome:3426 Allergome:573 Uniprot:Q6H9K0
Length = 377
Score = 71 (30.1 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 18/76 (23%), Positives = 27/76 (35%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG + NE+ GVR+K W G A ++ F+
Sbjct: 227 IGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPV 286
Query: 110 XXDRNYCSYNRGCPHQ 125
D+ YC Y + C Q
Sbjct: 287 ILDQEYCPYGQ-CSRQ 301
Score = 51 (23.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 6 CSDILIRNVKIIDPTNSPTTDGIQM 30
C DI ++V + P S TDGI +
Sbjct: 159 CEDITFQHVTVTAPGTSINTDGIHV 183
>TAIR|locus:2027534 [details] [associations]
symbol:AT1G56710 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC009323 IPI:IPI00545331 PIR:A96609 RefSeq:NP_176064.1
UniGene:At.49984 ProteinModelPortal:Q9FXC1 SMR:Q9FXC1 PaxDb:Q9FXC1
PRIDE:Q9FXC1 EnsemblPlants:AT1G56710.1 GeneID:842127
KEGG:ath:AT1G56710 TAIR:At1g56710 InParanoid:Q9FXC1 OMA:CDSPVAI
PhylomeDB:Q9FXC1 ProtClustDB:CLSN2912808 Genevestigator:Q9FXC1
Uniprot:Q9FXC1
Length = 434
Score = 70 (29.7 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 4 NHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
++CSD+++ +V I P +SP TDGI ++
Sbjct: 209 DNCSDVVVDSVIIKAPASSPNTDGIHIE 236
Score = 53 (23.7 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 18/76 (23%), Positives = 25/76 (32%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG H ++ GVRIK W + +G I F
Sbjct: 279 IGSLGVHNSQAYVSNITVTNSTIWNSDNGVRIKTW-QGGSGSVSRIVFSNILMVNVRNPI 337
Query: 110 XXDRNYCSYNRGCPHQ 125
D+ YC N C +Q
Sbjct: 338 MIDQYYCQTNN-CANQ 352
>TAIR|locus:2077442 [details] [associations]
symbol:AT3G07850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483
KO:K01213 GO:GO:0047911 EMBL:X72292 EMBL:AY056173 EMBL:AY091200
IPI:IPI00544320 PIR:S34200 RefSeq:NP_187442.1 UniGene:At.22234
ProteinModelPortal:P49063 SMR:P49063 STRING:P49063 PaxDb:P49063
PRIDE:P49063 ProMEX:P49063 EnsemblPlants:AT3G07850.1 GeneID:819976
KEGG:ath:AT3G07850 GeneFarm:575 TAIR:At3g07850 InParanoid:P49063
OMA:AIAIRIN PhylomeDB:P49063 ProtClustDB:CLSN2684911
Genevestigator:P49063 GermOnline:AT3G07850 Uniprot:P49063
Length = 444
Score = 74 (31.1 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 22/79 (27%), Positives = 26/79 (32%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG + NE+ GVRIK W G A NI F
Sbjct: 288 IGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPV 347
Query: 110 XXDRNYCSYNR---GCPHQ 125
D+ YC Y G P Q
Sbjct: 348 LIDQEYCPYGHCKAGVPSQ 366
Score = 49 (22.3 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
M I +C +I + ++ I P S TDGI +
Sbjct: 215 MNILNCKNITLSDIGIDAPPESLNTDGIHI 244
>TAIR|locus:2141877 [details] [associations]
symbol:AT4G18180 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 CAZy:GH28 HOGENOM:HOG000237792
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161548 IPI:IPI00532207 PIR:E85204 RefSeq:NP_193552.1
UniGene:At.54387 ProteinModelPortal:Q9M0M1 SMR:Q9M0M1 PRIDE:Q9M0M1
EnsemblPlants:AT4G18180.1 GeneID:827543 KEGG:ath:AT4G18180
TAIR:At4g18180 InParanoid:Q9M0M1 OMA:HIALVEC PhylomeDB:Q9M0M1
ProtClustDB:PLN02188 ArrayExpress:Q9M0M1 Genevestigator:Q9M0M1
Uniprot:Q9M0M1
Length = 414
Score = 65 (27.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/71 (25%), Positives = 26/71 (36%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWAR-PRNGYARNIAFRXXXXXXXXXX 108
V LG + NE+ G+RIK WA P A N+ F
Sbjct: 253 VGSLGRYPNEKDVNGLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNP 312
Query: 109 XXXDRNYCSYN 119
D++YC ++
Sbjct: 313 IIIDQSYCPFS 323
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+A+ C D + I P++SP TDGI ++
Sbjct: 180 IALVECRDFKGTRLNITAPSDSPNTDGIHIE 210
>TAIR|locus:2103478 [details] [associations]
symbol:ADPG1 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS;IDA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009830
"cell wall modification involved in abscission" evidence=RCA;TAS]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0010047 "fruit
dehiscence" evidence=IMP] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
GO:GO:0005737 GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AF037367 EMBL:AJ002532
EMBL:AL133248 EMBL:AK117942 EMBL:BT005376 IPI:IPI00526588
PIR:T46187 RefSeq:NP_191310.1 UniGene:At.26895
ProteinModelPortal:O23147 SMR:O23147 STRING:O23147 CAZy:GH28
PaxDb:O23147 PRIDE:O23147 EnsemblPlants:AT3G57510.1 GeneID:824918
KEGG:ath:AT3G57510 GeneFarm:24 TAIR:At3g57510 eggNOG:COG5434
HOGENOM:HOG000237792 InParanoid:O23147 KO:K01184 OMA:KNVVYKN
PhylomeDB:O23147 ProtClustDB:PLN02218 Genevestigator:O23147
GO:GO:0004650 GO:GO:0009901 GO:GO:0009830 GO:GO:0010047
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 Uniprot:O23147
Length = 431
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
++I C+ + + NV+I P +SP TDGI +
Sbjct: 218 ISIEKCNKVEVSNVEITAPGDSPNTDGIHI 247
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNRGCPHQ 125
GVRIK + + +G A+NI F+ D++YC ++ C Q
Sbjct: 319 GVRIKTY-QGGSGTAKNIKFQNIRMENVKNPIIIDQDYCDKDK-CEDQ 364
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 80 (33.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/24 (54%), Positives = 20/24 (83%)
Query: 5 HCSDILIRNVKIIDPTNSPTTDGI 28
+CS+++IRN+ I+ P N+P TDGI
Sbjct: 238 YCSNVVIRNMTILAPMNAPNTDGI 261
Score = 41 (19.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 78 GVRIKLWARPRNGYARNIAF 97
G+RIK + R GY NI F
Sbjct: 344 GLRIKT-DKGRGGYISNITF 362
>TAIR|locus:2054396 [details] [associations]
symbol:PGAZAT "polygalacturonase abscission zone A.
thaliana" species:3702 "Arabidopsis thaliana" [GO:0004650
"polygalacturonase activity" evidence=IEA;ISS;IDA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] [GO:0009830 "cell wall
modification involved in abscission" evidence=RCA;TAS] [GO:0009901
"anther dehiscence" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010227 "floral organ abscission" evidence=IMP]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
EMBL:AC002339 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
ProtClustDB:PLN02218 GO:GO:0004650 GO:GO:0009901 GO:GO:0009830
GO:GO:0010047 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AY078936 EMBL:AF083793 IPI:IPI00518873 PIR:H84846
RefSeq:NP_850359.1 UniGene:At.42781 ProteinModelPortal:Q8RY29
SMR:Q8RY29 STRING:Q8RY29 EnsemblPlants:AT2G41850.1 GeneID:818785
KEGG:ath:AT2G41850 GeneFarm:30 TAIR:At2g41850 InParanoid:Q8RY29
OMA:QINDITC PhylomeDB:Q8RY29 Genevestigator:Q8RY29 GO:GO:0010227
Uniprot:Q8RY29
Length = 433
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
++I CS++ + NV + P +SP TDGI +
Sbjct: 218 ISIEKCSNVQVSNVVVTAPADSPNTDGIHI 247
Score = 49 (22.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/71 (22%), Positives = 27/71 (38%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LGD ++ GVRIK + + +G A NI F+
Sbjct: 291 IGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTY-QGGSGTASNIIFQNIQMDNVKNPI 349
Query: 110 XXDRNYCSYNR 120
D++YC ++
Sbjct: 350 IIDQDYCDKSK 360
>TAIR|locus:2088252 [details] [associations]
symbol:AT3G14040 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB019229
UniGene:At.22234 ProtClustDB:CLSN2684911 IPI:IPI00524959
RefSeq:NP_188020.1 UniGene:At.48657 ProteinModelPortal:Q9LVJ4
SMR:Q9LVJ4 STRING:Q9LVJ4 PRIDE:Q9LVJ4 EnsemblPlants:AT3G14040.1
GeneID:820618 KEGG:ath:AT3G14040 TAIR:At3g14040 InParanoid:Q9LVJ4
OMA:NICSASG PhylomeDB:Q9LVJ4 Genevestigator:Q9LVJ4 Uniprot:Q9LVJ4
Length = 445
Score = 71 (30.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 19/69 (27%), Positives = 23/69 (33%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
+ LG + NE+ GVRIK W G A NI F
Sbjct: 289 IGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPV 348
Query: 110 XXDRNYCSY 118
D+ YC Y
Sbjct: 349 LIDQEYCPY 357
Score = 49 (22.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
M I +C +I + ++ I P S TDGI +
Sbjct: 216 MNILNCKNITLTDIGIDAPPESLNTDGIHI 245
>TAIR|locus:2088842 [details] [associations]
symbol:AT3G26610 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:X98130
EMBL:AB028611 EMBL:AK117620 IPI:IPI00530630 RefSeq:NP_189293.1
UniGene:At.37184 ProteinModelPortal:Q38958 SMR:Q38958
EnsemblPlants:AT3G26610.1 GeneID:822270 KEGG:ath:AT3G26610
TAIR:At3g26610 InParanoid:Q38958 OMA:QWLNFKW PhylomeDB:Q38958
ProtClustDB:CLSN2684866 Genevestigator:Q38958 Uniprot:Q38958
Length = 470
Score = 66 (28.3 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 7 SD-ILIRNVKIIDPTNSPTTDGIQMQ 31
SD + + N+ I P NSP TDGI +Q
Sbjct: 224 SDGVKVNNITISSPENSPNTDGIHLQ 249
Score = 52 (23.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNRGCPHQ 125
GVRIK W + G +N+ F D+ YC ++ C +Q
Sbjct: 320 GVRIKTW-QGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSK-CKNQ 365
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 72 (30.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 10/24 (41%), Positives = 18/24 (75%)
Query: 5 HCSDILIRNVKIIDPTNSPTTDGI 28
+C D++++N+ I+ P SP TDG+
Sbjct: 209 YCRDVVVKNLTILAPLESPNTDGV 232
Score = 44 (20.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 78 GVRIKLWARPRNGYARNI 95
G+RIK A R GY RN+
Sbjct: 315 GIRIKTSAG-RGGYVRNV 331
>TAIR|locus:2036581 [details] [associations]
symbol:AT1G60590 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0016556
"mRNA modification" evidence=RCA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AC002292 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 HSSP:P26213
IPI:IPI00529839 PIR:B96631 RefSeq:NP_564758.2 UniGene:At.27368
ProteinModelPortal:O22699 SMR:O22699 EnsemblPlants:AT1G60590.1
GeneID:842353 KEGG:ath:AT1G60590 TAIR:At1g60590 InParanoid:O22699
OMA:PANGSRH PhylomeDB:O22699 ProtClustDB:CLSN2680767
Genevestigator:O22699 Uniprot:O22699
Length = 540
Score = 70 (29.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQ 31
+ ++C +L+ +V + P +SP TDGI +Q
Sbjct: 301 LKFDNCVKVLVHDVNVSSPGDSPNTDGIHLQ 331
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNRGCPH 124
GVRIK W + G + I F D+ YC +++ H
Sbjct: 402 GVRIKTW-QGGIGSVKGILFSNIQLTEVQLPIVIDQFYCDHSKCMNH 447
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 66 (28.3 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 6 CSDILIRNVKIIDP-TNSPTTDGI 28
C ++ IRNV I+ P T +P TDGI
Sbjct: 255 CKNVTIRNVTILAPVTGAPNTDGI 278
Score = 50 (22.7 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 78 GVRIKLWARPRNGYARNIAFR 98
G+RIK A R GY RNI ++
Sbjct: 361 GIRIKT-APGRGGYIRNITYK 380
>TAIR|locus:2024680 [details] [associations]
symbol:PGA4 "polygalacturonase 4" species:3702
"Arabidopsis thaliana" [GO:0004650 "polygalacturonase activity"
evidence=IEA;ISS] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005618 GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC009525
EMBL:X72291 EMBL:Y16230 EMBL:AF428425 EMBL:AY065210 EMBL:AY133812
IPI:IPI00532768 PIR:S34199 RefSeq:NP_171778.1 UniGene:At.22350
ProteinModelPortal:P49062 SMR:P49062 STRING:P49062 PaxDb:P49062
PRIDE:P49062 EnsemblPlants:AT1G02790.1 GeneID:839391
KEGG:ath:AT1G02790 TAIR:At1g02790 InParanoid:P49062 KO:K01213
OMA:LVFEDIV PhylomeDB:P49062 ProtClustDB:CLSN2912732
Genevestigator:P49062 GermOnline:AT1G02790 GO:GO:0047911
Uniprot:P49062
Length = 422
Score = 60 (26.2 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 8 DILIRNVKIIDPTNSPTTDGIQM 30
++ I+N+K+ P SP TDGI +
Sbjct: 202 NVNIQNIKLTAPAESPNTDGIHL 224
Score = 54 (24.1 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 18/68 (26%), Positives = 22/68 (32%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGYARNIAFRXXXXXXXXXXX 109
V LG + NEE G+RIK W A +I F
Sbjct: 268 VGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPI 327
Query: 110 XXDRNYCS 117
D+NY S
Sbjct: 328 IIDQNYGS 335
>TAIR|locus:2077412 [details] [associations]
symbol:AT3G07830 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0009827 "plant-type cell
wall modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 ProtClustDB:CLSN2684940
IPI:IPI00535795 RefSeq:NP_187440.1 UniGene:At.40295
ProteinModelPortal:Q9SFD1 PRIDE:Q9SFD1 EnsemblPlants:AT3G07830.1
GeneID:819974 KEGG:ath:AT3G07830 TAIR:At3g07830 InParanoid:Q9SFD1
OMA:NIHFENI PhylomeDB:Q9SFD1 Genevestigator:Q9SFD1 Uniprot:Q9SFD1
Length = 397
Score = 59 (25.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 13 NVKIIDPTNSPTTDGIQM 30
NVKI+ P SP TDGI +
Sbjct: 177 NVKIMAPAESPNTDGIHL 194
Score = 54 (24.1 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 19/77 (24%), Positives = 27/77 (35%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPR-NGYARNIAFRXXXXXXXXXX 108
V LG + +E+ G+RIK W + A NI F
Sbjct: 238 VGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNP 297
Query: 109 XXXDRNYCSYNRGCPHQ 125
D+ YC +N+ C Q
Sbjct: 298 ILIDQEYCPWNQ-CNKQ 313
>TAIR|locus:2077437 [details] [associations]
symbol:AT3G07840 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009827
"plant-type cell wall modification" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 ProtClustDB:CLSN2684940
IPI:IPI00522605 RefSeq:NP_187441.1 UniGene:At.53217
ProteinModelPortal:Q9SFD0 PRIDE:Q9SFD0 EnsemblPlants:AT3G07840.1
GeneID:819975 KEGG:ath:AT3G07840 TAIR:At3g07840 InParanoid:Q9SFD0
OMA:GIASEMH PhylomeDB:Q9SFD0 ArrayExpress:Q9SFD0
Genevestigator:Q9SFD0 Uniprot:Q9SFD0
Length = 401
Score = 61 (26.5 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 11/18 (61%), Positives = 13/18 (72%)
Query: 13 NVKIIDPTNSPTTDGIQM 30
NVK+I P SP TDGI +
Sbjct: 177 NVKVIAPAESPNTDGIHL 194
Score = 52 (23.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 18/77 (23%), Positives = 26/77 (33%)
Query: 50 VNRLGDHLNEEGXXXXXXXXXXXXXXXXGVRIKLWARPRNGY-ARNIAFRXXXXXXXXXX 108
V LG +++E+ G+RIK W A I F
Sbjct: 238 VGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNP 297
Query: 109 XXXDRNYCSYNRGCPHQ 125
D+ YC +N+ C Q
Sbjct: 298 ILIDQEYCPWNQ-CNKQ 313
>TAIR|locus:2026795 [details] [associations]
symbol:AT1G70500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AC010796 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00520664
PIR:H96728 RefSeq:NP_177207.1 UniGene:At.52467
ProteinModelPortal:Q9CAL5 SMR:Q9CAL5 PRIDE:Q9CAL5
EnsemblPlants:AT1G70500.1 GeneID:843386 KEGG:ath:AT1G70500
TAIR:At1g70500 InParanoid:Q9CAL5 OMA:TIQSCRI PhylomeDB:Q9CAL5
ProtClustDB:CLSN2682788 Genevestigator:Q9CAL5 Uniprot:Q9CAL5
Length = 468
Score = 62 (26.9 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 78 GVRIKLWARPRNGYARNIAFRXXXXXXXXXXXXXDRNYCSYNRGCPHQ 125
G+RIK W + NGY + + F D+ YC C +Q
Sbjct: 317 GLRIKTW-QGGNGYVKGVRFENVVMQDVANPIIIDQFYCDSPSTCQNQ 363
Score = 52 (23.4 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM 30
+ I + + I V + P +SP TDGI +
Sbjct: 216 LIIQRSTTVRISRVMVTSPGDSPNTDGIHI 245
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.453 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 125 81 0.00091 102 3 11 22 0.41 29
29 0.42 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 568 (60 KB)
Total size of DFA: 116 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 6.19u 0.14s 6.33t Elapsed: 00:00:00
Total cpu time: 6.19u 0.14s 6.33t Elapsed: 00:00:00
Start: Fri May 10 13:44:43 2013 End: Fri May 10 13:44:43 2013