Query 040317
Match_columns 125
No_of_seqs 127 out of 1028
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 11:26:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bhe_A PEHA, polygalacturonase 100.0 5E-30 1.7E-34 205.2 13.6 115 1-118 177-317 (376)
2 2iq7_A Endopolygalacturonase; 100.0 1.1E-29 3.8E-34 201.1 13.9 116 1-118 126-269 (339)
3 1ia5_A Polygalacturonase; glyc 100.0 1.7E-29 5.8E-34 200.2 14.9 114 1-116 130-271 (339)
4 1nhc_A Polygalacturonase I; be 100.0 1.8E-29 6.1E-34 199.8 14.0 115 1-118 126-268 (336)
5 1czf_A Polygalacturonase II; b 100.0 8.1E-30 2.8E-34 203.8 12.0 115 1-118 152-294 (362)
6 1k5c_A Endopolygalacturonase; 100.0 7.9E-30 2.7E-34 202.0 11.4 114 1-116 122-263 (335)
7 1hg8_A Endopolygalacturonase; 100.0 2.8E-29 9.5E-34 199.7 14.5 116 1-118 130-281 (349)
8 3jur_A EXO-poly-alpha-D-galact 100.0 4.7E-28 1.6E-32 198.2 11.5 114 1-118 216-365 (448)
9 2uvf_A Exopolygalacturonase; G 99.9 3.2E-26 1.1E-30 193.1 14.9 116 1-119 357-505 (608)
10 1rmg_A Rgase A, rhamnogalactur 99.9 3.9E-25 1.3E-29 179.6 13.4 114 1-118 153-287 (422)
11 1h80_A IOTA-carrageenase; hydr 99.7 1.4E-17 4.6E-22 136.9 11.2 105 1-112 135-252 (464)
12 2x6w_A Tail spike protein; vir 99.7 9.7E-19 3.3E-23 146.7 4.4 92 1-114 201-321 (600)
13 1x0c_A Isopullulanase; glycosi 99.7 3.2E-17 1.1E-21 137.0 10.9 106 5-115 315-462 (549)
14 1ogo_X Dextranase; hydrolase, 99.7 1.8E-16 6.3E-21 133.0 9.9 100 1-109 350-491 (574)
15 1h80_A IOTA-carrageenase; hydr 99.6 1.1E-15 3.7E-20 125.6 10.2 103 5-118 173-284 (464)
16 3gq8_A Preneck appendage prote 99.6 1.5E-14 5.1E-19 121.8 10.3 112 1-115 137-286 (609)
17 3gqn_A Preneck appendage prote 99.6 1.3E-14 4.4E-19 124.4 9.9 112 1-115 137-286 (772)
18 1rmg_A Rgase A, rhamnogalactur 99.3 2.5E-11 8.6E-16 98.4 13.4 106 1-113 130-254 (422)
19 1czf_A Polygalacturonase II; b 99.3 5.8E-11 2E-15 94.7 11.7 108 1-114 129-260 (362)
20 1ia5_A Polygalacturonase; glyc 99.2 4.6E-10 1.6E-14 88.6 13.5 109 1-114 107-239 (339)
21 2iq7_A Endopolygalacturonase; 99.2 6.5E-10 2.2E-14 87.7 13.2 109 1-114 103-235 (339)
22 1k5c_A Endopolygalacturonase; 99.1 1.8E-10 6.1E-15 91.0 8.6 108 1-116 100-232 (335)
23 1nhc_A Polygalacturonase I; be 99.1 1.1E-09 3.8E-14 86.3 12.9 108 1-114 103-234 (336)
24 2uvf_A Exopolygalacturonase; G 99.0 9.2E-10 3.2E-14 92.8 9.8 121 1-122 383-551 (608)
25 1hg8_A Endopolygalacturonase; 99.0 5.1E-09 1.8E-13 82.9 11.9 108 2-114 106-247 (349)
26 3jur_A EXO-poly-alpha-D-galact 98.9 9.6E-09 3.3E-13 84.0 11.4 107 1-114 193-331 (448)
27 1bhe_A PEHA, polygalacturonase 98.9 1.8E-08 6E-13 80.3 12.1 105 1-114 154-284 (376)
28 2vbk_A Tailspike-protein; vira 98.6 2.8E-08 9.6E-13 81.2 4.1 72 5-76 177-286 (514)
29 1ogo_X Dextranase; hydrolase, 98.5 1.9E-07 6.4E-12 78.5 8.1 91 4-107 330-445 (574)
30 1x0c_A Isopullulanase; glycosi 98.4 6.4E-07 2.2E-11 74.9 8.8 48 59-106 435-483 (549)
31 2pyg_A Poly(beta-D-mannuronate 98.4 5.5E-06 1.9E-10 65.0 12.3 101 5-117 179-309 (377)
32 1pxz_A Major pollen allergen J 98.1 7.6E-06 2.6E-10 64.8 7.3 77 1-82 108-202 (346)
33 1air_A Pectate lyase C, PELC; 98.0 1.3E-05 4.6E-10 63.6 6.3 102 1-105 105-215 (353)
34 1pcl_A Pectate lyase E; lyase 97.9 0.00015 5.1E-09 57.6 10.7 104 1-105 98-227 (355)
35 3zsc_A Pectate trisaccharide-l 97.8 6.9E-05 2.4E-09 59.3 8.0 99 1-105 85-194 (340)
36 2pyg_A Poly(beta-D-mannuronate 97.7 0.0002 6.9E-09 56.0 8.7 45 62-107 280-335 (377)
37 2qy1_A Pectate lyase II; GAG l 97.6 8.4E-05 2.9E-09 58.4 5.9 103 1-105 88-204 (330)
38 3vmv_A Pectate lyase; polysacc 97.6 0.0003 1E-08 55.3 8.8 98 1-105 97-204 (326)
39 1vbl_A Pectate lyase 47; PL 47 97.5 0.00016 5.4E-09 58.6 6.1 82 1-82 150-258 (416)
40 3eqn_A Glucan 1,3-beta-glucosi 97.5 0.00046 1.6E-08 59.5 9.0 47 1-47 176-223 (758)
41 2x6w_A Tail spike protein; vir 97.5 0.00012 4.1E-09 61.7 5.0 81 1-99 180-287 (600)
42 1idk_A Pectin lyase A; signal, 97.4 0.00026 8.8E-09 56.3 6.5 69 2-75 127-199 (359)
43 3gq8_A Preneck appendage prote 97.4 0.0025 8.4E-08 53.9 11.7 96 6-105 182-309 (609)
44 2o04_A Pectate lyase, PL; hexa 97.3 0.00039 1.3E-08 56.1 6.2 102 2-105 146-276 (399)
45 1qcx_A Pectin lyase B; beta-he 97.2 0.0023 8E-08 50.8 9.2 69 2-75 127-199 (359)
46 3gqn_A Preneck appendage prote 97.0 0.0088 3E-07 51.7 11.5 95 6-105 182-309 (772)
47 1pe9_A Pectate lyase A; parall 97.0 0.0017 5.7E-08 51.7 6.6 101 4-105 111-238 (361)
48 3eqn_A Glucan 1,3-beta-glucosi 95.2 0.19 6.4E-06 43.5 10.8 102 9-116 157-276 (758)
49 3riq_A Tailspike protein; righ 93.9 0.17 5.8E-06 41.2 7.1 24 5-32 261-284 (543)
50 1pxz_A Major pollen allergen J 93.9 0.32 1.1E-05 38.2 8.6 79 26-111 106-201 (346)
51 3zsc_A Pectate trisaccharide-l 93.2 0.38 1.3E-05 37.8 7.9 71 25-109 82-165 (340)
52 2vfm_A Bifunctional tail prote 92.6 1.1 3.6E-05 36.1 9.7 80 5-107 268-375 (559)
53 2v5i_A Salmonella typhimurium 92.4 1 3.5E-05 36.2 9.4 80 5-107 271-378 (559)
54 1ru4_A Pectate lyase, PEL9A; p 92.4 0.34 1.2E-05 38.7 6.8 37 5-46 113-149 (400)
55 2xc1_A Bifunctional tail prote 91.5 1.5 5.3E-05 36.4 9.6 80 5-107 375-482 (666)
56 1air_A Pectate lyase C, PELC; 91.2 0.3 1E-05 38.5 5.1 107 1-110 133-265 (353)
57 2qy1_A Pectate lyase II; GAG l 91.1 1.4 4.6E-05 34.3 8.8 77 26-111 86-180 (330)
58 1pcl_A Pectate lyase E; lyase 90.0 1 3.6E-05 35.4 7.3 86 26-111 96-201 (355)
59 1vbl_A Pectate lyase 47; PL 47 89.5 0.98 3.4E-05 36.4 6.8 50 26-75 148-210 (416)
60 3t9g_A Pectate lyase; PL3, par 88.9 5.3 0.00018 29.0 10.2 37 7-49 52-89 (196)
61 1idk_A Pectin lyase A; signal, 87.8 0.93 3.2E-05 35.8 5.6 67 26-104 124-198 (359)
62 2o04_A Pectate lyase, PL; hexa 87.0 1.7 5.9E-05 34.7 6.8 85 26-111 143-251 (399)
63 1pe9_A Pectate lyase A; parall 85.9 2.2 7.5E-05 33.7 6.7 86 26-111 103-212 (361)
64 2inu_A Insulin fructotransfera 84.7 2.3 8E-05 34.2 6.4 35 6-45 170-204 (410)
65 3vmv_A Pectate lyase; polysacc 84.1 2.9 9.8E-05 32.6 6.6 87 12-111 79-181 (326)
66 1qcx_A Pectin lyase B; beta-he 83.9 2.6 9E-05 33.1 6.4 67 26-104 124-198 (359)
67 2inu_A Insulin fructotransfera 77.6 12 0.0004 30.2 8.2 39 7-45 136-182 (410)
68 1ee6_A Pectate lyase; parallel 75.6 20 0.0007 25.9 9.6 99 7-115 48-163 (197)
69 2vbk_A Tailspike-protein; vira 75.4 2.7 9.3E-05 34.6 4.0 49 33-82 178-238 (514)
70 1ru4_A Pectate lyase, PEL9A; p 69.2 11 0.00039 29.8 6.2 42 8-49 162-210 (400)
71 2nsp_A Pectinesterase A; micha 60.3 43 0.0015 25.9 7.9 46 4-49 93-155 (342)
72 1dbg_A Chondroitinase B; beta 58.1 33 0.0011 28.1 7.1 13 7-19 126-138 (506)
73 1gq8_A Pectinesterase; hydrola 54.6 36 0.0012 26.1 6.5 44 5-49 92-137 (319)
74 1xg2_A Pectinesterase 1; prote 49.1 18 0.00061 27.8 4.0 44 5-49 88-133 (317)
75 2vfm_A Bifunctional tail prote 30.9 44 0.0015 26.9 3.6 35 63-100 317-351 (559)
76 2v5i_A Salmonella typhimurium 30.7 45 0.0015 26.8 3.6 35 63-100 320-354 (559)
77 3uw0_A Pectinesterase; right-h 27.1 2E+02 0.0068 22.4 6.8 46 4-49 119-181 (364)
78 1gq8_A Pectinesterase; hydrola 26.1 2.2E+02 0.0074 21.6 10.7 39 5-49 120-158 (319)
79 2xc1_A Bifunctional tail prote 25.4 61 0.0021 27.0 3.6 35 63-100 424-458 (666)
80 1dbg_A Chondroitinase B; beta 22.1 2.6E+02 0.009 22.7 6.9 21 62-82 337-358 (506)
81 1xg2_A Pectinesterase 1; prote 22.0 2.6E+02 0.0089 21.1 9.7 39 5-49 116-154 (317)
No 1
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.97 E-value=5e-30 Score=205.25 Aligned_cols=115 Identities=31% Similarity=0.480 Sum_probs=105.3
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCce-------------------------e-ecc
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPFV-------------------------N-RLG 54 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~i-------------------------g-s~G 54 (125)
+++..|++|+|++++|.++..+||+||||+.+|+||+|+||+|.+||||+ | ++|
T Consensus 177 i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~nI~I~n~~~~~ghGisiG 256 (376)
T 1bhe_A 177 VVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIG 256 (376)
T ss_dssp EEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEEEEEEEEEEECSSSCEEEE
T ss_pred EEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCceEEEEEeeEEEccccEEec
Confidence 35778999999999999988889999999999999999999999999993 1 467
Q ss_pred CCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEeeeCCC
Q 040317 55 DHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRNYCSY 118 (125)
Q Consensus 55 ~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~y~~~ 118 (125)
+++ . .++||+|+||+|.++.+|+|||||++ ++|.|+||+|+||+|+++++||+|+|+|+++
T Consensus 257 Se~-~-~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~ 317 (376)
T 1bhe_A 257 SET-M-GVYNVTVDDLKMNGTTNGLRIKSDKS-AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKK 317 (376)
T ss_dssp EEE-S-SEEEEEEEEEEEESCSEEEEEECCTT-TCCEEEEEEEEEEEEESCSEEEEEETTSSCC
T ss_pred cCC-c-cEeeEEEEeeEEeCCCcEEEEEEecC-CCceEeeEEEEeEEEeCCCceEEEEeeccCC
Confidence 665 3 89999999999999999999999997 7899999999999999999999999999874
No 2
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.96 E-value=1.1e-29 Score=201.14 Aligned_cols=116 Identities=26% Similarity=0.464 Sum_probs=104.8
Q ss_pred CeEEeeecEEEEeEEEECCCC----CCCCCeEEecCcccEEEEeeEEeeCCCc-----------------------eeec
Q 040317 1 MAINHCSDILIRNVKIIDPTN----SPTTDGIQMQSSTGVTITSSSIMTGEPF-----------------------VNRL 53 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~----~~ntDGid~~~s~nV~I~n~~i~~gDD~-----------------------igs~ 53 (125)
|++..|++|+|++++|.++.. +||+||||+.+|+||+|+||+|.++||| +||+
T Consensus 126 i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGSl 205 (339)
T 2iq7_A 126 FSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDCLAINSGTNITFTGGTCSGGHGLSIGSV 205 (339)
T ss_dssp EEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEE
T ss_pred EEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCEEEEcCCccEEEEeEEEECCceEEECcC
Confidence 478899999999999999753 7999999999999999999999999999 3455
Q ss_pred cCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCc-cEEEEeeeCCC
Q 040317 54 GDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQN-PIIIDRNYCSY 118 (125)
Q Consensus 54 G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~-~i~i~~~y~~~ 118 (125)
|.++ .+.++||+|+||+|.++.+|+|||+|++ ++|.|+||+|+||+|++++. ||+|+|+|++.
T Consensus 206 g~~~-~~~v~nV~v~n~~~~~~~~girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~ 269 (339)
T 2iq7_A 206 GGRS-DNTVKTVTISNSKIVNSDNGVRIKTVSG-ATGSVSGVTYSGITLSNIAKYGIVIEQDYENG 269 (339)
T ss_dssp SSSS-CCEEEEEEEEEEEEESCSEEEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETT
T ss_pred Cccc-CCCEEEEEEEeeEEECCCcEEEEEEeCC-CCeEEEEEEEEeEEccCcccccEEEEeecCCC
Confidence 6564 6789999999999999999999999997 67999999999999999986 99999999873
No 3
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.96 E-value=1.7e-29 Score=200.19 Aligned_cols=114 Identities=24% Similarity=0.468 Sum_probs=102.7
Q ss_pred CeEEeeecEEEEeEEEECCCC----CCCCCeEEecCcccEEEEeeEEeeCCCc-----------------------eeec
Q 040317 1 MAINHCSDILIRNVKIIDPTN----SPTTDGIQMQSSTGVTITSSSIMTGEPF-----------------------VNRL 53 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~----~~ntDGid~~~s~nV~I~n~~i~~gDD~-----------------------igs~ 53 (125)
|++..|++|+|++++|.++.+ +||+||||+.+|+||+|+||+|+++||| +||+
T Consensus 130 i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~ 209 (339)
T 1ia5_A 130 FSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSV 209 (339)
T ss_dssp EEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSSCEEEEEE
T ss_pred EEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECCceEEECcC
Confidence 468889999999999999743 7999999999999999999999999999 2455
Q ss_pred cCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCc-cEEEEeeeC
Q 040317 54 GDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQN-PIIIDRNYC 116 (125)
Q Consensus 54 G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~-~i~i~~~y~ 116 (125)
|.++ .+.++||+|+||+|.++.+|+|||+|++ ++|.|+||+|+||+|++++. ||+|+|+|.
T Consensus 210 g~~~-~~~v~nV~v~n~~~~~t~~girIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~ 271 (339)
T 1ia5_A 210 GGRS-DNTVKNVTFVDSTIINSDNGVRIKTNID-TTGSVSDVTYKDITLTSIAKYGIVVQQNYG 271 (339)
T ss_dssp CSSS-CCEEEEEEEEEEEEESCSEEEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEET
T ss_pred Cccc-CCCEEEEEEEeeEEECCCcEEEEEEeCC-CCcEEEeeEEEEEEEECcccccEEEEccCC
Confidence 5553 5779999999999999999999999997 67999999999999999986 999999993
No 4
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.96 E-value=1.8e-29 Score=199.77 Aligned_cols=115 Identities=26% Similarity=0.512 Sum_probs=103.7
Q ss_pred CeEEeeecEEEEeEEEECCCC----CCCCCeEEecCcccEEEEeeEEeeCCCc-----------------------eeec
Q 040317 1 MAINHCSDILIRNVKIIDPTN----SPTTDGIQMQSSTGVTITSSSIMTGEPF-----------------------VNRL 53 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~----~~ntDGid~~~s~nV~I~n~~i~~gDD~-----------------------igs~ 53 (125)
|++. |++|+|++++|.++.. +||+||||+.+|+||+|+||+|.++||| +||+
T Consensus 126 i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGS~ 204 (336)
T 1nhc_A 126 ISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSGGHGLSIGSV 204 (336)
T ss_dssp EEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEESSSEEEEEEE
T ss_pred EEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEECCcCceEccC
Confidence 4688 9999999999999864 7999999999999999999999999999 2455
Q ss_pred cCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCc-cEEEEeeeCCC
Q 040317 54 GDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQN-PIIIDRNYCSY 118 (125)
Q Consensus 54 G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~-~i~i~~~y~~~ 118 (125)
|.++ .+.++||+|+||+|.++.+|+|||+|++ ++|.|+||+|+||+|++++. ||+|+|.|++.
T Consensus 205 g~~~-~~~v~nV~v~n~~~~~t~~girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~ 268 (336)
T 1nhc_A 205 GGRD-DNTVKNVTISDSTVSNSANGVRIKTIYK-ETGDVSEITYSNIQLSGITDYGIVIEQDYENG 268 (336)
T ss_dssp SSSS-CCEEEEEEEEEEEEESCSEEEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETT
T ss_pred cccc-CCCEEEEEEEeeEEECCCcEEEEEEECC-CCCEEeeeEEeeEEeeccccccEEEEeecCCC
Confidence 5443 5779999999999999999999999997 67999999999999999986 99999999873
No 5
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.96 E-value=8.1e-30 Score=203.76 Aligned_cols=115 Identities=27% Similarity=0.467 Sum_probs=102.7
Q ss_pred CeEEeeecEEEEeEEEECCCC----CCCCCeEEecCcccEEEEeeEEeeCCCc-----------------------eeec
Q 040317 1 MAINHCSDILIRNVKIIDPTN----SPTTDGIQMQSSTGVTITSSSIMTGEPF-----------------------VNRL 53 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~----~~ntDGid~~~s~nV~I~n~~i~~gDD~-----------------------igs~ 53 (125)
|++. |+||+|+|++|.++.+ +||+||||+.+|+||+|+||+|.+|||| +||+
T Consensus 152 i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~ 230 (362)
T 1czf_A 152 FSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSV 230 (362)
T ss_dssp EEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEE
T ss_pred EEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCCceeEEeec
Confidence 4688 9999999999999743 7999999999999999999999999999 2344
Q ss_pred cCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccC-ccEEEEeeeCCC
Q 040317 54 GDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQ-NPIIIDRNYCSY 118 (125)
Q Consensus 54 G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~-~~i~i~~~y~~~ 118 (125)
|.+. .+.|+||+|+||+|.++.+|+|||+|++ ++|.|+||+|+||+|++++ +||.|+|+|++.
T Consensus 231 G~~~-~~~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~ 294 (362)
T 1czf_A 231 GDRS-NNVVKNVTIEHSTVSNSENAVRIKTISG-ATGSVSEITYSNIVMSGISDYGVVIQQDYEDG 294 (362)
T ss_dssp CSSS-CCEEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETT
T ss_pred cccC-CCCEEEEEEEeeEEECCceEEEEEEeCC-CCceEeeEEEEeEEEECcccccEEEEEecCCC
Confidence 4442 5779999999999999999999999997 6799999999999999997 799999999863
No 6
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.96 E-value=7.9e-30 Score=202.04 Aligned_cols=114 Identities=18% Similarity=0.346 Sum_probs=102.7
Q ss_pred CeEEeeec-EEEEeEEEECCCC-----CCCCCeEEecCcccEEEEeeEEeeCCCce-------------------e-ecc
Q 040317 1 MAINHCSD-ILIRNVKIIDPTN-----SPTTDGIQMQSSTGVTITSSSIMTGEPFV-------------------N-RLG 54 (125)
Q Consensus 1 ~~i~~c~n-V~i~~i~I~~~~~-----~~ntDGid~~~s~nV~I~n~~i~~gDD~i-------------------g-s~G 54 (125)
|++..|++ |+|++++|.++.+ +||+||||+ +|+||+|+||+|++||||+ | ++|
T Consensus 122 i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisIG 200 (335)
T 1k5c_A 122 ISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQDDCIAINDGNNIRFENNQCSGGHGISIG 200 (335)
T ss_dssp EEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESSSCSEEEEEEEEEEEESCEEESSCCEEEE
T ss_pred EEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcCCCEEEeeCCeeEEEEEEEEECCccCeEe
Confidence 57899999 9999999999853 899999999 9999999999999999992 1 466
Q ss_pred CCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCC-ceEEeEEEEcEEEeccC-ccEEEEeeeC
Q 040317 55 DHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRN-GYARNIAFRNIIMNDIQ-NPIIIDRNYC 116 (125)
Q Consensus 55 ~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~-G~v~nI~~~ni~~~~v~-~~i~i~~~y~ 116 (125)
+++..+.|+||+|+||+|.++.+|+|||+|++ ++ |.|+||+|+||+|++++ +||.|+|+|.
T Consensus 201 S~g~~~~v~nV~v~n~~~~~t~~girIKt~~g-~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~ 263 (335)
T 1k5c_A 201 SIATGKHVSNVVIKGNTVTRSMYGVRIKAQRT-ATSASVSGVTYDANTISGIAKYGVLISQSYP 263 (335)
T ss_dssp EECTTCEEEEEEEESCEEEEEEEEEEEEEETT-CCSCEEEEEEEESCEEEEEEEEEEEEEEEET
T ss_pred eccCCCCEEEEEEEeeEEECCCceEEEEEeCC-CCcceEeeeEEEEEEEEccccccEEEEeeCC
Confidence 65434679999999999999999999999997 66 99999999999999997 6999999994
No 7
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.96 E-value=2.8e-29 Score=199.70 Aligned_cols=116 Identities=24% Similarity=0.406 Sum_probs=103.6
Q ss_pred CeEEeeecEEEEeEEEECCC-C-----------CCCCCeEEecCcccEEEEeeEEeeCCCc-------------------
Q 040317 1 MAINHCSDILIRNVKIIDPT-N-----------SPTTDGIQMQSSTGVTITSSSIMTGEPF------------------- 49 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~-~-----------~~ntDGid~~~s~nV~I~n~~i~~gDD~------------------- 49 (125)
|++..|++|+|++++|.++. + +||+||||+.+|+||+|+||+|.++|||
T Consensus 130 i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~g 209 (349)
T 1hg8_A 130 FDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGG 209 (349)
T ss_dssp EEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEESS
T ss_pred EEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeCC
Confidence 47889999999999999863 2 5899999999999999999999999999
Q ss_pred ----eeeccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccC-ccEEEEeeeCCC
Q 040317 50 ----VNRLGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQ-NPIIIDRNYCSY 118 (125)
Q Consensus 50 ----igs~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~-~~i~i~~~y~~~ 118 (125)
+||+|.+. .+.++||+|+||+|.++.+|+|||+|++ ++|.|+||+|+||+|++++ +||+|+|+|++.
T Consensus 210 hGisiGS~G~~~-~~~v~nV~v~n~~~~~~~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~ 281 (349)
T 1hg8_A 210 HGLSIGSVGGKS-DNVVDGVQFLSSQVVNSQNGCRIKSNSG-ATGTINNVTYQNIALTNISTYGVDVQQDYLNG 281 (349)
T ss_dssp CCEEEEEESSSS-CCEEEEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSS
T ss_pred cceEEccccccc-cCCEEEEEEEEEEEECCCcEEEEEecCC-CCccccceEEEEEEEEccccccEEEEeeccCC
Confidence 23444443 5779999999999999999999999997 6799999999999999997 699999999874
No 8
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.95 E-value=4.7e-28 Score=198.24 Aligned_cols=114 Identities=26% Similarity=0.460 Sum_probs=103.5
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCce------------------------------
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPFV------------------------------ 50 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~i------------------------------ 50 (125)
+++..|+||+|++++|.++ +||+||||+.+|+||+|+||+|.+||||+
T Consensus 216 i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~ 293 (448)
T 3jur_A 216 IHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQ 293 (448)
T ss_dssp EEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECS
T ss_pred EeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecC
Confidence 4678899999999999987 79999999999999999999999999982
Q ss_pred ----e-eccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccE-EEEeeeCCC
Q 040317 51 ----N-RLGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPI-IIDRNYCSY 118 (125)
Q Consensus 51 ----g-s~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i-~i~~~y~~~ 118 (125)
| ++|+++ .++++||+|+||++.++.+|+|||||++ ++|.|+||+|+||+|+++++|+ +|+|+|+..
T Consensus 294 ~gh~gisiGS~~-~~~v~nV~v~n~~~~~t~~GirIKt~~g-~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~ 365 (448)
T 3jur_A 294 ASHGGLVIGSEM-SGGVRNVVARNNVYMNVERALRLKTNSR-RGGYMENIFFIDNVAVNVSEEVIRINLRYDNE 365 (448)
T ss_dssp SCSEEEEECSSC-TTCEEEEEEESCEEESCSEEEEEECCTT-TCSEEEEEEEESCEEEEESSEEEEEESCGGGC
T ss_pred CCcceEEECCcc-cCcEEEEEEEEEEEecccceEEEEEEcC-CCceEeeEEEEEEEEECCccccEEEEeeccCC
Confidence 1 467776 6789999999999999999999999987 6799999999999999999988 999999764
No 9
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.94 E-value=3.2e-26 Score=193.07 Aligned_cols=116 Identities=21% Similarity=0.324 Sum_probs=101.2
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCce------------------------------
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPFV------------------------------ 50 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~i------------------------------ 50 (125)
+++..|++|+|++++|.. .++||+||||+.+|+||+|+||+|.+||||+
T Consensus 357 i~~~~~~nv~i~~v~i~~-~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~gh 435 (608)
T 2uvf_A 357 IMNLENHNVVANGLIHQT-YDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGH 435 (608)
T ss_dssp EEEESCEEEEEESCEEEC-TTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSS
T ss_pred EEEecCCCEEEeeEEEcC-CCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCC
Confidence 356777888888887654 3478999999999999999999999999993
Q ss_pred e--eccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEecc-CccEEEEeeeCCCC
Q 040317 51 N--RLGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDI-QNPIIIDRNYCSYN 119 (125)
Q Consensus 51 g--s~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v-~~~i~i~~~y~~~~ 119 (125)
| .+|+++ .++|+||+|+||++.++.+|++||||++ ++|.|+||+|+||+|+++ ++||+|+|.|++.+
T Consensus 436 g~~~iGS~~-~~~v~nI~v~n~~~~~t~~GirIKt~~g-~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~ 505 (608)
T 2uvf_A 436 GAIVTGSHT-GAWIEDILAENNVMYLTDIGLRAKSTST-IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSN 505 (608)
T ss_dssp CSEEEESCC-TTCEEEEEEESCEEESCSEEEEEEEETT-TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCS
T ss_pred CeEEEcccC-CCCEEEEEEEeEEEECCCceEEEeeecC-CCceEECcEEEeeEEEccccccEEEEeccCCCC
Confidence 1 267766 6889999999999999999999999987 779999999999999999 58999999998653
No 10
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.93 E-value=3.9e-25 Score=179.65 Aligned_cols=114 Identities=18% Similarity=0.243 Sum_probs=99.9
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCcee---------------------eccCCCCc
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPFVN---------------------RLGDHLNE 59 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~ig---------------------s~G~~~~~ 59 (125)
|++..|+||+|+|++|.+ .+.+|+||||+.+ +||+|+||+|.++|||+. ++|+++..
T Consensus 153 i~i~~~~nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~ 230 (422)
T 1rmg_A 153 FTMDTCSDGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD 230 (422)
T ss_dssp EEEEEEEEEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT
T ss_pred EEEeCcCCEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC
Confidence 468899999999999998 4568999999999 999999999999999931 34554423
Q ss_pred CCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEeeeCCC
Q 040317 60 EGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRNYCSY 118 (125)
Q Consensus 60 ~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~y~~~ 118 (125)
+.++||+|+||+|.++.+|++||+|.+ .|.++||+|+||+|+++++||.|+|.|+..
T Consensus 231 ~~v~nV~v~n~~~~~~~~Gi~Ikt~~g--~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~ 287 (422)
T 1rmg_A 231 TDVTDIVYRNVYTWSSNQMYMIKSNGG--SGTVSNVLLENFIGHGNAYSLDIDGYWSSM 287 (422)
T ss_dssp EEEEEEEEEEEEEESSSCSEEEEEBBC--CEEEEEEEEEEEEEEEESCSEEEETBCTTS
T ss_pred CcEEEEEEEeEEEeccceEEEEEecCC--CcEEEEEEEEeEEEECccccEEEEeeccCC
Confidence 569999999999999999999999875 489999999999999999999999999763
No 11
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.73 E-value=1.4e-17 Score=136.90 Aligned_cols=105 Identities=15% Similarity=0.046 Sum_probs=74.4
Q ss_pred CeEEeeecEEEEeEEEECCCCCC--------CCCeEEecCcccEEEEeeEEeeCCCceeeccCCCCcCCeEEEEEEeeEe
Q 040317 1 MAINHCSDILIRNVKIIDPTNSP--------TTDGIQMQSSTGVTITSSSIMTGEPFVNRLGDHLNEEGVQNVTVTSSSF 72 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~--------ntDGid~~~s~nV~I~n~~i~~gDD~igs~G~~~~~~~i~nV~v~n~~~ 72 (125)
|.|..|+|++|+++++.+...-+ |+|||++ .|+||+|+||+|.++||++|+ +. .+.++||+|+||++
T Consensus 135 i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i-~s~nV~I~n~~I~~gddgiGs---~~-~~~~~NV~V~n~~~ 209 (464)
T 1h80_A 135 FKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH-WSRNGIIERIKQNNALFGYGL---IQ-TYGADNILFRNLHS 209 (464)
T ss_dssp EEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE-EEEEEEEEEEEEESCCTTCEE---EE-ESEEEEEEEEEEEE
T ss_pred EEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee-eccCEEEeceEEecCCCeEEe---cc-cCCEeEEEEEeeEE
Confidence 35778999999999998854322 6799998 789999999999999998764 11 34566666666666
Q ss_pred cCCCceEEEEee-----cCCCCceEEeEEEEcEEEeccCccEEEE
Q 040317 73 TNTQNGVRIKLW-----ARPRNGYARNIAFRNIIMNDIQNPIIID 112 (125)
Q Consensus 73 ~~t~~gi~Ikt~-----~g~~~G~v~nI~~~ni~~~~v~~~i~i~ 112 (125)
.+ .+|+|||++ .+ ++|.++||+|+|++|+++..||.|.
T Consensus 210 ~g-g~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~ 252 (464)
T 1h80_A 210 EG-GIALRMETDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFG 252 (464)
T ss_dssp ES-SEEEEEECCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEE
T ss_pred EC-CCEEEEEeCCceeccC-CCCcEEEEEEEeEEEECCceeEEEe
Confidence 66 566666665 32 3456666666666666666666665
No 12
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.73 E-value=9.7e-19 Score=146.73 Aligned_cols=92 Identities=15% Similarity=0.130 Sum_probs=80.4
Q ss_pred CeE---EeeecEEEEeEE----EECCCCCCCCCeEEecCcccEEEEeeEEeeCCCc--e-------------------e-
Q 040317 1 MAI---NHCSDILIRNVK----IIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPF--V-------------------N- 51 (125)
Q Consensus 1 ~~i---~~c~nV~i~~i~----I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~--i-------------------g- 51 (125)
+++ ..|+||+|+|++ |.+ +|||||| |+|+||+|.+|||| + |
T Consensus 201 I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~e~~~~GHgGI 270 (600)
T 2x6w_A 201 ITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIACSVQLHQHDTF 270 (600)
T ss_dssp EEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEEEEEECSSSEE
T ss_pred EEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEEEEEcCCCCcE
Confidence 356 789999999999 776 8999999 99999999999999 3 1
Q ss_pred eccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 52 RLGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 52 s~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
++|+++ .+.|+||+|+| +||++.| ++|.|+||+|+||+|++++.+|.++|.
T Consensus 271 SIGSe~-~ggV~NV~V~N----------rIKt~~G-~GG~V~NItfeNI~m~nV~~~I~i~q~ 321 (600)
T 2x6w_A 271 YRGSTV-NGYCRGAYVVM----------HAAEAAG-AGSYAYNMQVENNIAVIYGQFVILGSD 321 (600)
T ss_dssp EESCEE-EEESEEEEEEE----------CGGGCTT-TCSEEEEEEEESCEEEESSEEEEEEEC
T ss_pred Eecccc-cCcEEEEEEEE----------EEEeecC-CCceEEEEEEEEEEEEccceEEEeCCC
Confidence 456655 57799999999 7888886 789999999999999999999999886
No 13
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.71 E-value=3.2e-17 Score=137.00 Aligned_cols=106 Identities=14% Similarity=0.119 Sum_probs=85.1
Q ss_pred ee-ec--EEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCcee----------------------eccCCCCc
Q 040317 5 HC-SD--ILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPFVN----------------------RLGDHLNE 59 (125)
Q Consensus 5 ~c-~n--V~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~ig----------------------s~G~~~~~ 59 (125)
.| ++ |+|+++++.++. .+||||||+. +||+|+||+|++||||+. ++|++ .
T Consensus 315 ~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIks~NI~I~n~~~~~~~g~~~IsiGs~--~ 389 (549)
T 1x0c_A 315 NSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKESVAPVVEFGWT--P 389 (549)
T ss_dssp SCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEECCSSSEEEEEEEEEECSSSCSEECCBS--C
T ss_pred cCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEECCCCEEEEeeEEEcCCCCceEEECCC--C
Confidence 45 69 999999999864 6799999999 999999999999999931 34442 4
Q ss_pred CCeEEEEEEeeEecCCCc------eEEEEe---e--cC-----CCCceEEeEEEEcEEEeccC-ccEEEEeee
Q 040317 60 EGVQNVTVTSSSFTNTQN------GVRIKL---W--AR-----PRNGYARNIAFRNIIMNDIQ-NPIIIDRNY 115 (125)
Q Consensus 60 ~~i~nV~v~n~~~~~t~~------gi~Ikt---~--~g-----~~~G~v~nI~~~ni~~~~v~-~~i~i~~~y 115 (125)
+.++||+|+||+|.++.. +.+||+ | .+ ...|.|+||+|+||+|++++ +++.+.+.|
T Consensus 390 ~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~ 462 (549)
T 1x0c_A 390 RNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWSNFRAEGSSSALFR 462 (549)
T ss_dssp CCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEEEEEEEEEECCSEE
T ss_pred CcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceEccEEEEeEEEEeEEEeceEEeeec
Confidence 779999999999999864 555897 2 20 12589999999999999997 677665554
No 14
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.67 E-value=1.8e-16 Score=132.99 Aligned_cols=100 Identities=16% Similarity=0.196 Sum_probs=79.3
Q ss_pred CeEEeeecE--EEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCce--------------------e--eccCC
Q 040317 1 MAINHCSDI--LIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPFV--------------------N--RLGDH 56 (125)
Q Consensus 1 ~~i~~c~nV--~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~i--------------------g--s~G~~ 56 (125)
+++..|++| +|+++++.++. .+||||||+. +||+|+||+|++||||+ + ++|+.
T Consensus 350 i~~~~c~nV~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i~~g~g~g~IsIGS~ 426 (574)
T 1ogo_X 350 MDFNGNSGISSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCHNDPIIQMGWT 426 (574)
T ss_dssp EEECSSSCEEEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECSSSCSEECCSS
T ss_pred EeecCCCChhhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECCccEEEEeEEEECCCCCceEEEcCC
Confidence 467889999 99999998753 4579999999 99999999999999994 1 34442
Q ss_pred CCcCCeEEEEEEeeEecCCCce--------EEE----------EeecCCCCceEEeEEEEcEEEeccCccE
Q 040317 57 LNEEGVQNVTVTSSSFTNTQNG--------VRI----------KLWARPRNGYARNIAFRNIIMNDIQNPI 109 (125)
Q Consensus 57 ~~~~~i~nV~v~n~~~~~t~~g--------i~I----------kt~~g~~~G~v~nI~~~ni~~~~v~~~i 109 (125)
.+.|+||+|+||+|.++..+ ..| |...+ .| | ||+|+||+|++++.|+
T Consensus 427 --~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g--~g-V-NI~f~NI~~~~v~~~i 491 (574)
T 1ogo_X 427 --SRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSR--KS-I-SMTVSNVVCEGLCPSL 491 (574)
T ss_dssp --CCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEE--EE-E-EEEEEEEEECSSBCEE
T ss_pred --CCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCC--ce-E-EEEEEeEEEEceeEee
Confidence 57899999999999887542 222 22222 24 8 9999999999998885
No 15
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.63 E-value=1.1e-15 Score=125.62 Aligned_cols=103 Identities=11% Similarity=0.122 Sum_probs=89.6
Q ss_pred eeecEEEEeEEEECCCCCCCCCe-EEecCcccEEEEeeE--------EeeCCCceeeccCCCCcCCeEEEEEEeeEecCC
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDG-IQMQSSTGVTITSSS--------IMTGEPFVNRLGDHLNEEGVQNVTVTSSSFTNT 75 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDG-id~~~s~nV~I~n~~--------i~~gDD~igs~G~~~~~~~i~nV~v~n~~~~~t 75 (125)
.|+||+|+|++|.++ ++++| ++...++||+|+||. |.++|||+|+. . .+.++||+|+||+|.+.
T Consensus 173 ~s~nV~I~n~~I~~g---ddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~---~-~g~v~NI~~~Ni~~~nv 245 (464)
T 1h80_A 173 WSRNGIIERIKQNNA---LFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNY---K-QGGIRNIFADNIRCSKG 245 (464)
T ss_dssp EEEEEEEEEEEEESC---CTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHH---T-CCEEEEEEEEEEEEESS
T ss_pred eccCEEEeceEEecC---CCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccC---C-CCcEEEEEEEeEEEECC
Confidence 799999999999996 56789 889999999999999 56777777532 2 46799999999999999
Q ss_pred CceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEeeeCCC
Q 040317 76 QNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRNYCSY 118 (125)
Q Consensus 76 ~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~y~~~ 118 (125)
.+|++||++ .+.++||+|+||++.++..|+.|+|.|++.
T Consensus 246 ~~~I~I~p~----~~~isnItfeNI~~t~~~~aI~i~q~y~~~ 284 (464)
T 1h80_A 246 LAAVMFGPH----FMKNGDVQVTNVSSVSCGSAVRSDSGFVEL 284 (464)
T ss_dssp SEEEEEECT----TCBCCCEEEEEEEEESSSCSEEECCCCCEE
T ss_pred ceeEEEeCC----CceEeEEEEEEEEEEccceeEEEecCcccc
Confidence 999999942 257999999999999999999999999853
No 16
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.56 E-value=1.5e-14 Score=121.78 Aligned_cols=112 Identities=17% Similarity=0.244 Sum_probs=87.7
Q ss_pred CeEEeeecEEEEeEEEECCCC------CC-CCCeEEecC------cccEEEEeeEE-eeCCCcee---------------
Q 040317 1 MAINHCSDILIRNVKIIDPTN------SP-TTDGIQMQS------STGVTITSSSI-MTGEPFVN--------------- 51 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~------~~-ntDGid~~~------s~nV~I~n~~i-~~gDD~ig--------------- 51 (125)
|.|..|++|+|+++++.+++. ++ ..||+|+++ |+||+|+||+| .+||||+.
T Consensus 137 I~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~ 216 (609)
T 3gq8_A 137 LSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSH 216 (609)
T ss_dssp EEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEE
T ss_pred EEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEE
Confidence 468899999999999988652 12 128999999 99999999999 67999942
Q ss_pred -e------ccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEc-EEEeccC-ccEEEEeee
Q 040317 52 -R------LGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRN-IIMNDIQ-NPIIIDRNY 115 (125)
Q Consensus 52 -s------~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~n-i~~~~v~-~~i~i~~~y 115 (125)
. .|.+. ..+.+||+|+||++.++.+|+|||++.+ ++.++||.|+| +.+++++ +-+...++|
T Consensus 217 gp~G~S~~~GIsI-Gsgs~NVtV~Nc~i~nt~~GIrIKt~~~--~~~v~NV~I~n~vs~~nvrsyn~r~iG~~ 286 (609)
T 3gq8_A 217 DPRLTANCNGFEI-DDGSRHVVLSNNRSKGCYGGIEIKAHGD--APAAYNISINGHMSVEDVRSYNFRHIGHH 286 (609)
T ss_dssp CCSSCSSCCSEEE-CTTCEEEEEESEEEESSSEEEEEEECTT--SCCCEEEEEEEEEEESCSEEEEEEETTSC
T ss_pred CCCCCCCcccEEc-cCCcccEEEEeeEEECCCCEEEEEecCC--CCccccEEEECCEeecCceEecceEEccc
Confidence 1 12121 2335999999999999999999999874 58999999998 6777764 466666666
No 17
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.55 E-value=1.3e-14 Score=124.37 Aligned_cols=112 Identities=17% Similarity=0.244 Sum_probs=86.1
Q ss_pred CeEEeeecEEEEeEEEECCCC------CC-CCCeEEecC------cccEEEEeeEE-eeCCCcee---------------
Q 040317 1 MAINHCSDILIRNVKIIDPTN------SP-TTDGIQMQS------STGVTITSSSI-MTGEPFVN--------------- 51 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~------~~-ntDGid~~~------s~nV~I~n~~i-~~gDD~ig--------------- 51 (125)
|.|..|+||+|+++++.+++. ++ +.||+|+++ |+||+|+||+| .+||||+.
T Consensus 137 I~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~ 216 (772)
T 3gqn_A 137 LSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSH 216 (772)
T ss_dssp EEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEE
T ss_pred EEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEE
Confidence 468899999999999987652 11 138999999 99999999999 66999932
Q ss_pred -e------ccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEc-EEEeccC-ccEEEEeee
Q 040317 52 -R------LGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRN-IIMNDIQ-NPIIIDRNY 115 (125)
Q Consensus 52 -s------~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~n-i~~~~v~-~~i~i~~~y 115 (125)
. .|.+. ..+.+||+|+||++.++.+|+|||++.+ ++.++||.|.+ +.+++++ +-+...++|
T Consensus 217 gphG~S~~~GIsI-Gsgs~NVtV~Nc~~~nT~nGIRIKt~~~--gg~v~NV~I~gnis~~dvrsynir~iG~h 286 (772)
T 3gqn_A 217 DPRLTANCNGFEI-DDGSRHVVLSNNRSKGCYGGIEIKAHGD--APAAYNISINGHMSVEDVRSYNFRHIGHH 286 (772)
T ss_dssp CCSSSSSCCSEEE-CTTCEEEEEEEEEEESSSEEEEECCCTT--SCCCEEEEEEEEEEESCSEEEEECCTTSC
T ss_pred CCCCCCCcccEEe-cCCcccEEEEceEEECCCcEEEEEEeCC--CCccccEEEECCEEeccCeEecceEEccc
Confidence 1 12121 2335999999999999999999999864 68899999985 8887764 355544444
No 18
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.32 E-value=2.5e-11 Score=98.41 Aligned_cols=106 Identities=13% Similarity=0.218 Sum_probs=80.9
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCC----Cce--ee---------c--cCCCC--cCC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGE----PFV--NR---------L--GDHLN--EEG 61 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gD----D~i--gs---------~--G~~~~--~~~ 61 (125)
|++..|+|++|+++++.++ +. .+|++..|+||+|+|+.|.++| |++ .+ + |...- ..+
T Consensus 130 i~~~~~~nv~I~~iti~ns---p~-~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~~nV~I~n~~i~~gDD~Iai~s~ 205 (422)
T 1rmg_A 130 LRLTDVTHFSVHDIILVDA---PA-FHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWGSNIWVHDVEVTNKDECVTVKSP 205 (422)
T ss_dssp EEEEEEEEEEEEEEEEECC---SS-CSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEEEEEEEEEEEEESSSEEEEEEEE
T ss_pred EEEcccceEEEECeEEECC---Cc-eEEEEeCcCCEEEEeEEEECCCCCCCccEeecCCeEEEEeeEEeCCCCeEEeCCC
Confidence 4688999999999999984 33 4899999999999999999853 332 10 1 11000 124
Q ss_pred eEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEe
Q 040317 62 VQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDR 113 (125)
Q Consensus 62 i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~ 113 (125)
.+||+|+||++... +|+.|++.. ++|.++||+|+|++|.+..+++.|..
T Consensus 206 ~~nI~I~n~~~~~~-~GisIGS~g--~~~~v~nV~v~n~~~~~~~~Gi~Ikt 254 (422)
T 1rmg_A 206 ANNILVESIYCNWS-GGCAMGSLG--ADTDVTDIVYRNVYTWSSNQMYMIKS 254 (422)
T ss_dssp EEEEEEEEEEEESS-SEEEEEEEC--TTEEEEEEEEEEEEEESSSCSEEEEE
T ss_pred CcCEEEEeEEEcCC-cceeecccC--CCCcEEEEEEEeEEEeccceEEEEEe
Confidence 78888888887665 488888753 45789999999999999999999986
No 19
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.25 E-value=5.8e-11 Score=94.66 Aligned_cols=108 Identities=15% Similarity=0.183 Sum_probs=81.1
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEee-CCCce----------e------------eccCCC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMT-GEPFV----------N------------RLGDHL 57 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~-gDD~i----------g------------s~G~~~ 57 (125)
|++..|+|++|+++++.++ |.+ +|++. |+||+|++++|.+ .||+. . .-|...
T Consensus 129 i~~~~~~nv~i~~iti~ns---p~~-~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDc 203 (362)
T 1czf_A 129 FYAHGLDSSSITGLNIKNT---PLM-AFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDC 203 (362)
T ss_dssp EEEEEEETEEEESCEEECC---SSC-CEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCS
T ss_pred EEEeecccEEEEEEEEecC---Ccc-EEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCE
Confidence 4688999999999999985 444 69999 9999999999998 34421 0 011110
Q ss_pred C-cCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 58 N-EEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 58 ~-~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
- -+.=+||+|+||++... +|+.|+|......+.|+||+|+|++|.+..+++.|...
T Consensus 204 Iaiksg~nI~i~n~~~~~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~ 260 (362)
T 1czf_A 204 LAVNSGENIWFTGGTCIGG-HGLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTI 260 (362)
T ss_dssp EEESSEEEEEEESCEEESS-CCEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEeCCeEEEEEEEEEeCC-ceeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEe
Confidence 0 01128899999988875 58999885221358899999999999999999999864
No 20
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.18 E-value=4.6e-10 Score=88.58 Aligned_cols=109 Identities=15% Similarity=0.194 Sum_probs=82.4
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeC-CC--------ce--e------------eccCCC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTG-EP--------FV--N------------RLGDHL 57 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~g-DD--------~i--g------------s~G~~~ 57 (125)
|.|..|++++|+++++.+++ ..+|++..|+||+|+++.|.+. +| ++ . +-|...
T Consensus 107 i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDc 182 (339)
T 1ia5_A 107 FAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQDDC 182 (339)
T ss_dssp EEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECSSCS
T ss_pred EEEeecCcEEEEEEEEEcCC----cceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcCCCe
Confidence 46889999999999999853 3589999999999999999973 33 21 0 111111
Q ss_pred C-cCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 58 N-EEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 58 ~-~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
. -..=+||+|+||++.+. +|+.|.|......+.++||+|+|++|.+..+++.|...
T Consensus 183 Iaiksg~nI~i~n~~~~~g-hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~ 239 (339)
T 1ia5_A 183 VAVNSGENIYFSGGYCSGG-HGLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTN 239 (339)
T ss_dssp EEESSEEEEEEESCEEESS-SCEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEE
T ss_pred EEEeCCeEEEEEeEEEECC-ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEe
Confidence 0 11128999999998876 58999885322348899999999999999999999864
No 21
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.16 E-value=6.5e-10 Score=87.69 Aligned_cols=109 Identities=12% Similarity=0.156 Sum_probs=82.7
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeC-CC--------ce--e------------eccCCC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTG-EP--------FV--N------------RLGDHL 57 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~g-DD--------~i--g------------s~G~~~ 57 (125)
|.|..|++++|+++++.+++ ..+|++..|+||+|+++.|.+. +| ++ . .-|...
T Consensus 103 i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~gDDc 178 (339)
T 2iq7_A 103 FYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQDDC 178 (339)
T ss_dssp EEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECSSCS
T ss_pred EEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecCCCE
Confidence 46789999999999999853 3589999999999999999974 33 21 0 111110
Q ss_pred C-cCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 58 N-EEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 58 ~-~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
. -+.=+||+|+||++... +|+.|+|......+.++||+|+|++|.+..+++.|...
T Consensus 179 iaiksg~nI~i~n~~~~~g-hGisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~ 235 (339)
T 2iq7_A 179 LAINSGTNITFTGGTCSGG-HGLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTV 235 (339)
T ss_dssp EEESSEEEEEEESCEEESS-CCEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEE
T ss_pred EEEcCCccEEEEeEEEECC-ceEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEe
Confidence 0 11238999999999886 58999885322358899999999999999999999864
No 22
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.12 E-value=1.8e-10 Score=90.99 Aligned_cols=108 Identities=9% Similarity=0.080 Sum_probs=81.4
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCccc-EEEEeeEEeeC-CCce---------ee-------------ccCC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTG-VTITSSSIMTG-EPFV---------NR-------------LGDH 56 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~n-V~I~n~~i~~g-DD~i---------gs-------------~G~~ 56 (125)
|.|..|+ ++|+++++.+++ .+ ++++..|+| |+|++++|.+. +|+. -- -|..
T Consensus 100 i~~~~~~-v~i~giti~nsp---~~-~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi~s~nV~I~n~~i~~gDD 174 (335)
T 1k5c_A 100 FLKIKGS-GTYKKFEVLNSP---AQ-AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDVSANNVTIQNCIVKNQDD 174 (335)
T ss_dssp SEEEEEE-EEEESCEEESCS---SC-CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEEECSSEEEESCEEESSSC
T ss_pred EEEeceE-EEEEEEEEECCC---cc-eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcccCCeEEEEeeEEEcCCC
Confidence 5788999 999999999953 33 799999999 99999999985 3421 00 1110
Q ss_pred CC-cCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEeeeC
Q 040317 57 LN-EEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRNYC 116 (125)
Q Consensus 57 ~~-~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~y~ 116 (125)
.. -+.=+||+|+||++..+ +|+.|+|... .+.|+||+|+|++|.+..+++.|.....
T Consensus 175 cIaiksg~nI~i~n~~~~~g-hGisIGS~g~--~~~v~nV~v~n~~~~~t~~girIKt~~g 232 (335)
T 1k5c_A 175 CIAINDGNNIRFENNQCSGG-HGISIGSIAT--GKHVSNVVIKGNTVTRSMYGVRIKAQRT 232 (335)
T ss_dssp SEEEEEEEEEEEESCEEESS-CCEEEEEECT--TCEEEEEEEESCEEEEEEEEEEEEEETT
T ss_pred EEEeeCCeeEEEEEEEEECC-ccCeEeeccC--CCCEEEEEEEeeEEECCCceEEEEEeCC
Confidence 00 01118899999998875 6899988642 4889999999999999999999986543
No 23
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.12 E-value=1.1e-09 Score=86.26 Aligned_cols=108 Identities=16% Similarity=0.250 Sum_probs=81.4
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCC---------Ccee--------------eccCCC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGE---------PFVN--------------RLGDHL 57 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gD---------D~ig--------------s~G~~~ 57 (125)
|.|..|+|++|+++++.++ |.+ +|++. |+||+|+++.|.+.. |++- .-|...
T Consensus 103 i~~~~~~nv~i~~i~i~ns---p~~-~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~gDDc 177 (336)
T 1nhc_A 103 MYIHDVEDSTFKGINIKNT---PVQ-AISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDC 177 (336)
T ss_dssp EEEEEEEEEEEESCEEECC---SSC-CEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESSSEE
T ss_pred EEEeeeCcEEEEEEEEEeC---Ccc-EEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcCCCE
Confidence 4678999999999999985 444 79999 999999999999852 2210 111100
Q ss_pred C-cCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 58 N-EEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 58 ~-~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
. -+.=+||+|+||++.+. +|+.|.|..+...+.++||+|+|++|.+..+++.|...
T Consensus 178 iaiksg~nI~i~n~~~~~g-hGisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~ 234 (336)
T 1nhc_A 178 IAINSGESISFTGGTCSGG-HGLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTI 234 (336)
T ss_dssp EEESSEEEEEEESCEEESS-SEEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEE
T ss_pred EEEeCCeEEEEEeEEEECC-cCceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEE
Confidence 0 11128999999998876 58999885332348899999999999999999999864
No 24
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.03 E-value=9.2e-10 Score=92.80 Aligned_cols=121 Identities=9% Similarity=0.120 Sum_probs=89.0
Q ss_pred CeEEeeecEEEEeEEEECCCC------CCCCCeEEecCcccEEEEeeEEeeCCC--ceee--------------------
Q 040317 1 MAINHCSDILIRNVKIIDPTN------SPTTDGIQMQSSTGVTITSSSIMTGEP--FVNR-------------------- 52 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~------~~ntDGid~~~s~nV~I~n~~i~~gDD--~igs-------------------- 52 (125)
|++..|++|+|+|++|.+.++ +++.||++...|+||+|+||++..+++ .+||
T Consensus 383 idi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~ 462 (608)
T 2uvf_A 383 IEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTD 462 (608)
T ss_dssp EEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCS
T ss_pred EEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCC
Confidence 578899999999999998654 346677776678999999999988775 4332
Q ss_pred ----ccCCCC-cCCeEEEEEEeeEecCC-CceEEEEeecCC-----------CCceEEeEEEEcEEEeccC---ccEEEE
Q 040317 53 ----LGDHLN-EEGVQNVTVTSSSFTNT-QNGVRIKLWARP-----------RNGYARNIAFRNIIMNDIQ---NPIIID 112 (125)
Q Consensus 53 ----~G~~~~-~~~i~nV~v~n~~~~~t-~~gi~Ikt~~g~-----------~~G~v~nI~~~ni~~~~v~---~~i~i~ 112 (125)
+.+... .+.++||+|+|++|.+. .++|.|+..-+. ..+.+++|+|+||++++++ .++.|.
T Consensus 463 ~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~ 542 (608)
T 2uvf_A 463 IGLRAKSTSTIGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIK 542 (608)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEE
T ss_pred ceEEEeeecCCCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEE
Confidence 111111 34599999999999998 599999865321 2477999999999999986 477776
Q ss_pred eeeCCCCCCC
Q 040317 113 RNYCSYNRGC 122 (125)
Q Consensus 113 ~~y~~~~~~c 122 (125)
.. +..+.+|
T Consensus 543 g~-~~~~~p~ 551 (608)
T 2uvf_A 543 GD-TANKAWH 551 (608)
T ss_dssp CB-GGGTBCE
T ss_pred EE-cCCCCcc
Confidence 43 4433345
No 25
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=98.99 E-value=5.1e-09 Score=82.92 Aligned_cols=108 Identities=15% Similarity=0.121 Sum_probs=78.7
Q ss_pred eE-E-eeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeC-CC----------------ce--e---------
Q 040317 2 AI-N-HCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTG-EP----------------FV--N--------- 51 (125)
Q Consensus 2 ~i-~-~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~g-DD----------------~i--g--------- 51 (125)
.| . .|++++|+++++.+++ ..+|++..|+||+|+++.|.+. +| ++ .
T Consensus 106 ~~~~~~~~nv~I~giti~nsp----~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n 181 (349)
T 1hg8_A 106 IVVQKTTGNSKITNLNIQNWP----VHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDN 181 (349)
T ss_dssp EEEEEEESSEEEESCEEECCS----SEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEE
T ss_pred EEeecCcCcEEEEEEEEEcCC----CceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEe
Confidence 45 5 6889999999999853 3489999999999999999972 22 21 0
Q ss_pred ---eccCCCC-cCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 52 ---RLGDHLN-EEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 52 ---s~G~~~~-~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
.-|...- -..-+||+|+||++.+. +|+.|.|......+.++||+|+|++|.+..+++.|...
T Consensus 182 ~~i~~gDDcIaiksg~nI~i~n~~~~~g-hGisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~ 247 (349)
T 1hg8_A 182 NHVYNQDDCVAVTSGTNIVVSNMYCSGG-HGLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSN 247 (349)
T ss_dssp EEEECSSCSEEESSEEEEEEEEEEEESS-CCEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred eEEecCCCeEEeeCCeEEEEEeEEEeCC-cceEEccccccccCCEEEEEEEEEEEECCCcEEEEEec
Confidence 0111100 11127888888888765 58888886211348899999999999999999999863
No 26
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=98.92 E-value=9.6e-09 Score=83.95 Aligned_cols=107 Identities=21% Similarity=0.308 Sum_probs=81.0
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEee---CCCce--------------eeccCC-----CC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMT---GEPFV--------------NRLGDH-----LN 58 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~---gDD~i--------------gs~G~~-----~~ 58 (125)
|.|.+|+||+|+++++.++ |.+ ++++..|+||+|+++.|.+ .=|++ -.-|.. +.
T Consensus 193 i~~~~~~nv~i~giti~ns---p~~-~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg 268 (448)
T 3jur_A 193 VQFYRCRNVLVEGVKIINS---PMW-CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSG 268 (448)
T ss_dssp EEEESCEEEEEESCEEESC---SSC-SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEBCC
T ss_pred EEEEcccceEEEeeEEEeC---CCc-eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEeccC
Confidence 4688999999999999984 444 7999999999999999986 23331 011211 10
Q ss_pred --------cCCeEEEEEEeeEec--CCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 59 --------EEGVQNVTVTSSSFT--NTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 59 --------~~~i~nV~v~n~~~~--~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
....+||+|+||+++ ..+.|+.|.|.. .|.|+||+|+|+++.+..+++.|...
T Consensus 269 ~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~---~~~v~nV~v~n~~~~~t~~GirIKt~ 331 (448)
T 3jur_A 269 RDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEM---SGGVRNVVARNNVYMNVERALRLKTN 331 (448)
T ss_dssp CHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSC---TTCEEEEEEESCEEESCSEEEEEECC
T ss_pred ccccccccCCCceeEEEEEeEEecCCCcceEEECCcc---cCcEEEEEEEEEEEecccceEEEEEE
Confidence 012799999999994 445699997743 36799999999999999999999753
No 27
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.90 E-value=1.8e-08 Score=80.29 Aligned_cols=105 Identities=20% Similarity=0.320 Sum_probs=77.7
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCC-----cee--------------eccCCCC--c
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEP-----FVN--------------RLGDHLN--E 59 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD-----~ig--------------s~G~~~~--~ 59 (125)
|.|..|+|++|+++++.++ |.+ ++.+..|++|+|+++.|.+..+ ++- .-|.... .
T Consensus 154 i~~~~~~nv~I~~iti~ns---p~~-~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaik 229 (376)
T 1bhe_A 154 IQINKSKNFTLYNVSLINS---PNF-HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIK 229 (376)
T ss_dssp EEEESCEEEEEEEEEEECC---SSC-SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEE
T ss_pred EEEEcceEEEEEeEEEECC---CcE-EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEc
Confidence 4688999999999999984 434 7899999999999999987433 210 1121100 1
Q ss_pred -----CCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEee
Q 040317 60 -----EGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRN 114 (125)
Q Consensus 60 -----~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~ 114 (125)
...+||+|+||++.. .+|+.|.|... .++||+|+|+++.+..+++.|...
T Consensus 230 s~~~~~~s~nI~I~n~~~~~-ghGisiGSe~~----~v~nV~v~n~~~~~t~~GirIKt~ 284 (376)
T 1bhe_A 230 AYKGRAETRNISILHNDFGT-GHGMSIGSETM----GVYNVTVDDLKMNGTTNGLRIKSD 284 (376)
T ss_dssp ECTTSCCEEEEEEEEEEECS-SSCEEEEEEES----SEEEEEEEEEEEESCSEEEEEECC
T ss_pred ccCCCCCceEEEEEeeEEEc-cccEEeccCCc----cEeeEEEEeeEEeCCCcEEEEEEe
Confidence 257788888888765 46777776442 599999999999999999999753
No 28
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=98.59 E-value=2.8e-08 Score=81.24 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=53.8
Q ss_pred eeecEEEEeEEEE-CCCCCC-----CC------CeEEec-CcccEEEEeeEEeeCCCce---------------------
Q 040317 5 HCSDILIRNVKII-DPTNSP-----TT------DGIQMQ-SSTGVTITSSSIMTGEPFV--------------------- 50 (125)
Q Consensus 5 ~c~nV~i~~i~I~-~~~~~~-----nt------DGid~~-~s~nV~I~n~~i~~gDD~i--------------------- 50 (125)
.|++|.+++++.. .....+ .. +||++. +|+||+|++|+|+.||||+
T Consensus 177 ~fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f~eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~ 256 (514)
T 2vbk_A 177 VFDNVMVNEVETAYLMQGLWHSKFIACQAGTCRVGLHFLGQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR 256 (514)
T ss_dssp EEESCEEEEEEEEEEEESEEEEEEESCEEEEEEEEEEEESCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC
T ss_pred EeeeEEEEeEEEeEeccCcEEEeEeccCceecccCccccCCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc
Confidence 4778888888542 111011 11 478866 8999999999999999992
Q ss_pred -e--eccCCCCcCCeEE-EEEEeeEecCCC
Q 040317 51 -N--RLGDHLNEEGVQN-VTVTSSSFTNTQ 76 (125)
Q Consensus 51 -g--s~G~~~~~~~i~n-V~v~n~~~~~t~ 76 (125)
| .+|+|+..++|+| |+|++|.|.++.
T Consensus 257 hgav~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 SEAIILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp CEEEEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred cccEEECchhhcccccccEEEEeeeccCCc
Confidence 3 3899944899999 999999999873
No 29
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=98.54 E-value=1.9e-07 Score=78.47 Aligned_cols=91 Identities=10% Similarity=0.127 Sum_probs=60.8
Q ss_pred EeeecEEEEeEEEECCCCCCCCCeEEecCcccE--EEEeeEEeeC----CCceeeccCCCCcCCeEEEEEEeeEecCCCc
Q 040317 4 NHCSDILIRNVKIIDPTNSPTTDGIQMQSSTGV--TITSSSIMTG----EPFVNRLGDHLNEEGVQNVTVTSSSFTNTQN 77 (125)
Q Consensus 4 ~~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV--~I~n~~i~~g----DD~igs~G~~~~~~~i~nV~v~n~~~~~t~~ 77 (125)
.+|+||+|+++++.++ |.+ .+++..|+|| +|+++.+.+. -|++- -. +||+|+||+|.....
T Consensus 330 ~~c~NV~I~Giti~NS---p~w-~i~~~~c~nV~~~I~nv~i~~~~~~nTDGID--------i~-~NV~I~nc~I~~gDD 396 (574)
T 1ogo_X 330 GGGQTWYCVGPTINAP---PFN-TMDFNGNSGISSQISDYKQVGAFFFQTDGPE--------IY-PNSVVHDVFWHVNDD 396 (574)
T ss_dssp CSSEEEEEESCEEECC---SSC-SEEECSSSCEEEEEEEEEEECCCSTTCCCCB--------CC-TTCEEEEEEEEESSC
T ss_pred CCceeEEEECeEEECC---CCc-EEeecCCCChhhEEEeeEeeCCCCCCCccCc--------cc-CCEEEEeeEEECCCC
Confidence 4999999999999985 444 5899999999 9999998751 23211 01 444444444444444
Q ss_pred eEEEEe----------ecC---------CCCceEEeEEEEcEEEeccCc
Q 040317 78 GVRIKL----------WAR---------PRNGYARNIAFRNIIMNDIQN 107 (125)
Q Consensus 78 gi~Ikt----------~~g---------~~~G~v~nI~~~ni~~~~v~~ 107 (125)
+|.||+ +.+ ...|.|+||+|+|++|.+.+.
T Consensus 397 cIaIks~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~ 445 (574)
T 1ogo_X 397 AIKIYYSGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRY 445 (574)
T ss_dssp SEECCSTTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCC
T ss_pred EEEECCccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcc
Confidence 444441 000 023789999999999988653
No 30
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=98.45 E-value=6.4e-07 Score=74.86 Aligned_cols=48 Identities=21% Similarity=0.342 Sum_probs=35.0
Q ss_pred cCCeEEEEEEeeEecCCC-ceEEEEeecCCCCceEEeEEEEcEEEeccC
Q 040317 59 EEGVQNVTVTSSSFTNTQ-NGVRIKLWARPRNGYARNIAFRNIIMNDIQ 106 (125)
Q Consensus 59 ~~~i~nV~v~n~~~~~t~-~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~ 106 (125)
.+.|+||+|+|++|.+.. .|+.+....+.+++.++||+|+||++.+++
T Consensus 435 ~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~ 483 (549)
T 1x0c_A 435 STGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFE 483 (549)
T ss_dssp CCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEEC
T ss_pred CceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccc
Confidence 456999999999988754 454332222224567999999999999886
No 31
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.38 E-value=5.5e-06 Score=64.96 Aligned_cols=101 Identities=12% Similarity=0.150 Sum_probs=66.4
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecC-cccEEEEeeEEeeCCCceeec--cCCC----------------------Cc
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQS-STGVTITSSSIMTGEPFVNRL--GDHL----------------------NE 59 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~-s~nV~I~n~~i~~gDD~igs~--G~~~----------------------~~ 59 (125)
.|++++|++.++.. ++.|||++.. |++++|+++.+...+||+..+ |.+. ..
T Consensus 179 ~s~~~~i~~N~~~~----~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~ 254 (377)
T 2pyg_A 179 YLVDSVFENNVAYA----NDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLL 254 (377)
T ss_dssp SEEEEEEESCEEES----CSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEE
T ss_pred ccCCcEEECcEEEc----cccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEe
Confidence 34444444443332 4589999887 999999999999988884321 2111 01
Q ss_pred CCeEEEEEEeeEecCC-CceEEEEeecCCCCceEEeEEEEcEEEeccCc----cEEEEeeeCC
Q 040317 60 EGVQNVTVTSSSFTNT-QNGVRIKLWARPRNGYARNIAFRNIIMNDIQN----PIIIDRNYCS 117 (125)
Q Consensus 60 ~~i~nV~v~n~~~~~t-~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~----~i~i~~~y~~ 117 (125)
..+++++|+++++.++ ..||+||. +++++|+|.++.+... +.++.+.|..
T Consensus 255 ~~~~~v~i~~N~i~~~~~~GI~i~g--------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~ 309 (377)
T 2pyg_A 255 KMTSDITLQNADIHGNGSSGVRVYG--------AQDVQILDNQIHDNAQAAAVPEVLLQSFDD 309 (377)
T ss_dssp EEEEEEEEESCEEESCSSCSEEEEE--------EEEEEEESCEEESCCSSSSCCSEEEECEEE
T ss_pred ccccCeEEECCEEECCCCceEEEec--------CCCcEEECcEEECCcccccccceEEEEecC
Confidence 1366777777777776 66777761 7899999999987643 4555555643
No 32
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.09 E-value=7.6e-06 Score=64.83 Aligned_cols=77 Identities=16% Similarity=0.248 Sum_probs=60.6
Q ss_pred CeEEeeecEEEEeEEEECCC------------------CCCCCCeEEecCcccEEEEeeEEeeCCCceeeccCCCCcCCe
Q 040317 1 MAINHCSDILIRNVKIIDPT------------------NSPTTDGIQMQSSTGVTITSSSIMTGEPFVNRLGDHLNEEGV 62 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~------------------~~~ntDGid~~~s~nV~I~n~~i~~gDD~igs~G~~~~~~~i 62 (125)
|.+..++||.|+|++|.... .....|||.+.+++||.|++|.++.+.|.+-++. ..-
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~-----~~s 182 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVT-----LGS 182 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEE-----SSC
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeec-----cCc
Confidence 34667999999999998641 1356899999999999999999999888654332 236
Q ss_pred EEEEEEeeEecCCCceEEEE
Q 040317 63 QNVTVTSSSFTNTQNGVRIK 82 (125)
Q Consensus 63 ~nV~v~n~~~~~t~~gi~Ik 82 (125)
.+|+|+++.|.+...++.+.
T Consensus 183 ~~vTISnn~f~~H~k~~l~G 202 (346)
T 1pxz_A 183 TGITISNNHFFNHHKVMLLG 202 (346)
T ss_dssp EEEEEESCEEESEEEEEEES
T ss_pred ceEEEEeeEEecCCceeEEC
Confidence 88999999998876676664
No 33
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.95 E-value=1.3e-05 Score=63.63 Aligned_cols=102 Identities=19% Similarity=0.225 Sum_probs=70.1
Q ss_pred CeEEeeecEEEEeEEEECCCC-CCCCCeEEecCcccEEEEeeEEeeC-CCceeec-cCCCC------cCCeEEEEEEeeE
Q 040317 1 MAINHCSDILIRNVKIIDPTN-SPTTDGIQMQSSTGVTITSSSIMTG-EPFVNRL-GDHLN------EEGVQNVTVTSSS 71 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~-~~ntDGid~~~s~nV~I~n~~i~~g-DD~igs~-G~~~~------~~~i~nV~v~n~~ 71 (125)
|.|..++||.|+||+|..... ....|+|.+..++||.|+.|.+.-+ +.|.+.. +.... ...-.+|+|++|.
T Consensus 105 l~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~ 184 (353)
T 1air_A 105 IWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNY 184 (353)
T ss_dssp EEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCE
T ss_pred EEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeE
Confidence 356688999999999996432 2467999999999999999999864 4555421 11000 1345699999999
Q ss_pred ecCCCceEEEEeecCCCCceEEeEEEEcEEEecc
Q 040317 72 FTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDI 105 (125)
Q Consensus 72 ~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v 105 (125)
|.+...+.-+...+. ..| .+|+|-+..+.++
T Consensus 185 f~~h~k~~LiG~sd~-~~g--~~vT~hhN~f~~~ 215 (353)
T 1air_A 185 IHGVKKVGLDGSSSS-DTG--RNITYHHNYYNDV 215 (353)
T ss_dssp EEEEEECCEESSSTT-CCC--CEEEEESCEEEEE
T ss_pred EcCCCceeEECCCcC-CCC--ceEEEEceEEcCC
Confidence 987655554443322 223 5788888777776
No 34
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.85 E-value=0.00015 Score=57.64 Aligned_cols=104 Identities=19% Similarity=0.311 Sum_probs=69.4
Q ss_pred CeEEeeecEEEEeEEEECCCC---------C--CCCCeEEecCcccEEEEeeEEeeC---CCceee-ccCCC--------
Q 040317 1 MAINHCSDILIRNVKIIDPTN---------S--PTTDGIQMQSSTGVTITSSSIMTG---EPFVNR-LGDHL-------- 57 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~---------~--~ntDGid~~~s~nV~I~n~~i~~g---DD~igs-~G~~~-------- 57 (125)
|.|..++||.|+||+|....+ . ...|+|.+.+++||.|++|.+..+ |++... +|...
T Consensus 98 l~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~D 177 (355)
T 1pcl_A 98 LVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALD 177 (355)
T ss_pred EEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCcccccccccee
Confidence 456789999999999996421 1 247999999999999999999965 443221 22211
Q ss_pred CcCCeEEEEEEeeEecCCCceEEEEeecCCCC---ceEEeEEEEcEEEecc
Q 040317 58 NEEGVQNVTVTSSSFTNTQNGVRIKLWARPRN---GYARNIAFRNIIMNDI 105 (125)
Q Consensus 58 ~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~---G~v~nI~~~ni~~~~v 105 (125)
....-.+|+|++|.|.+...+.-+..-+. .. .--.+|||.+-.+.++
T Consensus 178 i~~~s~~VTiS~n~f~~h~k~~LiG~sd~-~~~~d~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 178 IKKGSDYVTISYSRFELHDKTILIGHSDS-NGSQDSGKLRVTFHNNVFDRV 227 (355)
T ss_pred eecCCCcEEEEeeEEcCCCceEEeCCCCC-CcccccCcceEEEECcEEeCC
Confidence 02345789999999998777766653221 00 0123577777777666
No 35
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.80 E-value=6.9e-05 Score=59.29 Aligned_cols=99 Identities=14% Similarity=0.236 Sum_probs=71.1
Q ss_pred CeEEeeecEEEEeEEEECCCC--CC-----CCCeEEecCcccEEEEeeEEeeCCCceeeccCCCCcCCeEEEEEEeeEec
Q 040317 1 MAINHCSDILIRNVKIIDPTN--SP-----TTDGIQMQSSTGVTITSSSIMTGEPFVNRLGDHLNEEGVQNVTVTSSSFT 73 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~--~~-----ntDGid~~~s~nV~I~n~~i~~gDD~igs~G~~~~~~~i~nV~v~n~~~~ 73 (125)
|.|..++||.|+||+|..... .+ ..|+|.+..++||.|++|.+..+-|..-++. ....+|+|++|.|.
T Consensus 85 i~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~-----~~s~~vTISnn~f~ 159 (340)
T 3zsc_A 85 LVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIK-----KYSNYITVSWNKFV 159 (340)
T ss_dssp EEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEE-----TTCEEEEEESCEEE
T ss_pred eEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEe-----cCCceEEEECcEec
Confidence 356788999999999998521 23 6899999999999999999998766543332 34689999999999
Q ss_pred CCCceEEEEeecCCCC-ce---EEeEEEEcEEEecc
Q 040317 74 NTQNGVRIKLWARPRN-GY---ARNIAFRNIIMNDI 105 (125)
Q Consensus 74 ~t~~gi~Ikt~~g~~~-G~---v~nI~~~ni~~~~v 105 (125)
+...+.-+..-++ .+ +. -.+|+|-+-.+.++
T Consensus 160 ~h~k~~LiG~sd~-~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 160 DHDKVSLVGSSDK-EDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp SCSBCCEECCCTT-SCHHHHHHSCEEEEESCEEESC
T ss_pred cCceeeEeCcCCC-CccccccCCcEEEEECeEecCC
Confidence 8777766653221 10 01 13577777777766
No 36
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.67 E-value=0.0002 Score=55.97 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=31.8
Q ss_pred eEEEEEEeeEecCCCc-----eEEEEeecCCCCce------EEeEEEEcEEEeccCc
Q 040317 62 VQNVTVTSSSFTNTQN-----GVRIKLWARPRNGY------ARNIAFRNIIMNDIQN 107 (125)
Q Consensus 62 i~nV~v~n~~~~~t~~-----gi~Ikt~~g~~~G~------v~nI~~~ni~~~~v~~ 107 (125)
.++++|++.+|.+... .+.++.+.+ .++. -+++++++.++.+...
T Consensus 280 ~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~i~~N~i~g~~~ 335 (377)
T 2pyg_A 280 AQDVQILDNQIHDNAQAAAVPEVLLQSFDD-TAGASGTYYTTLNTRIEGNTISGSAN 335 (377)
T ss_dssp EEEEEEESCEEESCCSSSSCCSEEEECEEE-TTSSSCEEECCBCCEEESCEEECCSS
T ss_pred CCCcEEECcEEECCcccccccceEEEEecC-CCccceeeeeccCeEEECCEEECcCC
Confidence 7899999999987532 344554443 2221 3799999999999887
No 37
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.62 E-value=8.4e-05 Score=58.42 Aligned_cols=103 Identities=16% Similarity=0.238 Sum_probs=66.2
Q ss_pred CeEE-eeecEEEEeEEEECCCCCCCCCeEEec-----CcccEEEEeeEEeeC-CCceeeccCCCC------cCCeEEEEE
Q 040317 1 MAIN-HCSDILIRNVKIIDPTNSPTTDGIQMQ-----SSTGVTITSSSIMTG-EPFVNRLGDHLN------EEGVQNVTV 67 (125)
Q Consensus 1 ~~i~-~c~nV~i~~i~I~~~~~~~ntDGid~~-----~s~nV~I~n~~i~~g-DD~igs~G~~~~------~~~i~nV~v 67 (125)
|.|. .++||.|+||+|......+..|+|.+. .++||.|+.|.+..+ |.|.+ .+...- ...-.+|||
T Consensus 88 l~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~-~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 88 IRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSG-AGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTT-CTTCSSCCSEEEESSCEEEEE
T ss_pred EEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEcccccccc-CCcceeecccccccCcceEEE
Confidence 3456 799999999999975433468999999 599999999999754 34432 121110 124579999
Q ss_pred EeeEecCCCceEEEEeecCCC-CceEEeEEEEcEEEecc
Q 040317 68 TSSSFTNTQNGVRIKLWARPR-NGYARNIAFRNIIMNDI 105 (125)
Q Consensus 68 ~n~~~~~t~~gi~Ikt~~g~~-~G~v~nI~~~ni~~~~v 105 (125)
++|.|.+...++-+..-+... .+ ..+|||.+-.+.++
T Consensus 167 Snn~f~~h~k~~L~G~sd~~~~~~-~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 167 SYNYVYNYQKVALNGYSDSDTKNS-AARTTYHHNRFENV 204 (330)
T ss_dssp ESCEEEEEEECCEESSSTTCGGGG-GCEEEEESCEEEEE
T ss_pred EcceeccCCeEEEECCCCccccCC-CceEEEECcEEcCC
Confidence 999998765555443221100 01 13566666666655
No 38
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.60 E-value=0.0003 Score=55.32 Aligned_cols=98 Identities=15% Similarity=0.216 Sum_probs=66.4
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEecC-cccEEEEeeEEeeCC---------CceeeccCCCCcCCeEEEEEEee
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQMQS-STGVTITSSSIMTGE---------PFVNRLGDHLNEEGVQNVTVTSS 70 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~~~-s~nV~I~n~~i~~gD---------D~igs~G~~~~~~~i~nV~v~n~ 70 (125)
|.|..++||.|+||+|.... ....|+|.+.. ++||.|++|.+..+- |..-.+ ..+-.+|||++|
T Consensus 97 l~i~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di-----~~~s~~VTISnn 170 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDM-----KRNAEYITVSWN 170 (326)
T ss_dssp EEEESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEE-----CTTCEEEEEESC
T ss_pred EEEEecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEe-----cCCCceEEEEce
Confidence 35678999999999999764 45689999996 999999999997421 111111 234689999999
Q ss_pred EecCCCceEEEEeecCCCCceEEeEEEEcEEEecc
Q 040317 71 SFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDI 105 (125)
Q Consensus 71 ~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v 105 (125)
.|.+...+.-+...+. ....-.+|||-+-.+.++
T Consensus 171 ~f~~h~k~~LiG~sd~-~~~~~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 171 KFENHWKTMLVGHTDN-ASLAPDKITYHHNYFNNL 204 (326)
T ss_dssp EEEEEEECEEECSSSC-GGGCCEEEEEESCEEEEE
T ss_pred EEecCceEEEECCCCC-CcccCccEEEEeeEecCC
Confidence 9987656665543221 000013677777777665
No 39
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.50 E-value=0.00016 Score=58.62 Aligned_cols=82 Identities=20% Similarity=0.365 Sum_probs=57.5
Q ss_pred CeEEeeecEEEEeEEEECCCC---------------CCCCCeEEecCcccEEEEeeEEeeCCCcee----eccCCCC---
Q 040317 1 MAINHCSDILIRNVKIIDPTN---------------SPTTDGIQMQSSTGVTITSSSIMTGEPFVN----RLGDHLN--- 58 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~---------------~~ntDGid~~~s~nV~I~n~~i~~gDD~ig----s~G~~~~--- 58 (125)
|.|..++||.|+||+|....+ .+..|+|.+..++||.|.+|.+..++|.=. -+|....
T Consensus 150 l~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~D 229 (416)
T 1vbl_A 150 FLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHD 229 (416)
T ss_dssp EEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCC
T ss_pred EEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeecc
Confidence 356689999999999987532 135699999999999999999997754310 0121110
Q ss_pred -----cCCeEEEEEEeeEecCCCceEEEE
Q 040317 59 -----EEGVQNVTVTSSSFTNTQNGVRIK 82 (125)
Q Consensus 59 -----~~~i~nV~v~n~~~~~t~~gi~Ik 82 (125)
...-.+|+|++|.|.+...++-|.
T Consensus 230 Gl~Di~~~s~~VTISnn~f~~h~k~~LiG 258 (416)
T 1vbl_A 230 GALDIKNSSDFITISYNVFTNHDKVTLIG 258 (416)
T ss_dssp CSEEEESSCEEEEEESCEEEEEEECCEEC
T ss_pred cceeeecCCCcEEEEeeEEcCCCceeEeC
Confidence 234579999999998765555554
No 40
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=97.48 E-value=0.00046 Score=59.50 Aligned_cols=47 Identities=15% Similarity=0.162 Sum_probs=38.9
Q ss_pred CeEEeeecEEEEeEEEECCCCCC-CCCeEEecCcccEEEEeeEEeeCC
Q 040317 1 MAINHCSDILIRNVKIIDPTNSP-TTDGIQMQSSTGVTITSSSIMTGE 47 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~-ntDGid~~~s~nV~I~n~~i~~gD 47 (125)
||+..|++..++||.|..+..++ ..+||++...+...|+|+.|..|+
T Consensus 176 Ihw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~ 223 (758)
T 3eqn_A 176 IHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGN 223 (758)
T ss_dssp EECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCS
T ss_pred EEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCc
Confidence 46677889999999999986554 388999998889999999999863
No 41
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=97.46 E-value=0.00012 Score=61.71 Aligned_cols=81 Identities=10% Similarity=0.134 Sum_probs=60.3
Q ss_pred CeEEeeecEEEEeEEEECCCCCCCCCeEEe---cCcccEEEEeeE----EeeCCCceeeccCCCCcCCeEEEEEEeeEec
Q 040317 1 MAINHCSDILIRNVKIIDPTNSPTTDGIQM---QSSTGVTITSSS----IMTGEPFVNRLGDHLNEEGVQNVTVTSSSFT 73 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~~ntDGid~---~~s~nV~I~n~~----i~~gDD~igs~G~~~~~~~i~nV~v~n~~~~ 73 (125)
|.+.+|+ |+++++.+++ |.+ .+++ ..|+||+|+|+. |.+ +.. ..+| |+|+||+|.
T Consensus 180 l~f~~c~---I~GITi~NSD--P~w-~I~iG~~~~c~NVtI~nvtfi~aI~s--------spN--TDGI--V~I~nc~I~ 241 (600)
T 2x6w_A 180 GRSYNCS---VTGITFQNGD--VTW-AITLGWNGYGSNCYVRKCRFINLVNS--------SVN--ADHS--TVYVNCPYS 241 (600)
T ss_dssp CSEEEEE---EESCEEESCC--CSC-SEEECBTTBEEEEEEESCEEECCCCC--------SSC--CCEE--EEEECSSSE
T ss_pred EEEeeeE---EeCeEEECCC--Ccc-EEEeCCCCCcccEEEeCeEEcceEec--------CCC--CCEE--EEEEeeEEe
Confidence 4577888 9999999841 444 6899 899999999999 654 222 2446 999999999
Q ss_pred CCCceEEE-Eeec----------CCC---------CceEEeEEEEc
Q 040317 74 NTQNGVRI-KLWA----------RPR---------NGYARNIAFRN 99 (125)
Q Consensus 74 ~t~~gi~I-kt~~----------g~~---------~G~v~nI~~~n 99 (125)
..+.+|.| |+.. .+. .|.|+||+++|
T Consensus 242 tGDDCIAI~KSGs~~ni~~e~~~~GHgGISIGSe~~ggV~NV~V~N 287 (600)
T 2x6w_A 242 GVESCYFSMSSSFARNIACSVQLHQHDTFYRGSTVNGYCRGAYVVM 287 (600)
T ss_dssp EEESCEEECCCTTHHHHEEEEEECSSSEEEESCEEEEESEEEEEEE
T ss_pred cCCcEEEEecCCCcCCeEEEEEcCCCCcEEecccccCcEEEEEEEE
Confidence 88889999 8532 111 15688998877
No 42
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.43 E-value=0.00026 Score=56.32 Aligned_cols=69 Identities=20% Similarity=0.253 Sum_probs=51.7
Q ss_pred eEE-eeecEEEEeEEEECCC--CCCCCCeEEecCcccEEEEeeEEee-CCCceeeccCCCCcCCeEEEEEEeeEecCC
Q 040317 2 AIN-HCSDILIRNVKIIDPT--NSPTTDGIQMQSSTGVTITSSSIMT-GEPFVNRLGDHLNEEGVQNVTVTSSSFTNT 75 (125)
Q Consensus 2 ~i~-~c~nV~i~~i~I~~~~--~~~ntDGid~~~s~nV~I~n~~i~~-gDD~igs~G~~~~~~~i~nV~v~n~~~~~t 75 (125)
.|. .++||.|+||+|.... ..+..|+|-+..++||.|++|.+.. +|..+. .| ...-.+|+|++|.|.+.
T Consensus 127 ~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~-~g----~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 127 RIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYV-LG----TSADNRVSLTNNYIDGV 199 (359)
T ss_dssp EECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEE-EC----CCTTCEEEEESCEEECB
T ss_pred EEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEE-ec----ccCcceEEEECcEecCC
Confidence 344 6899999999999731 1246799999999999999999986 444432 23 23457899999999753
No 43
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.35 E-value=0.0025 Score=53.92 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=63.1
Q ss_pred eecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCC---Ccee-ecc-----------------------CCCC
Q 040317 6 CSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGE---PFVN-RLG-----------------------DHLN 58 (125)
Q Consensus 6 c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gD---D~ig-s~G-----------------------~~~~ 58 (125)
|+||+|+|++|.+.. .|||-+.+|+||+|+||++.... .+.| ++| ....
T Consensus 182 S~NV~I~Nc~I~~tG----DDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~~ 257 (609)
T 3gq8_A 182 SENIWIENCEATGFG----DDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGD 257 (609)
T ss_dssp CEEEEEESCEEESCS----SCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECTT
T ss_pred ceeEEEEeeEEEecC----CCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecCC
Confidence 899999999996532 58999988999999999995331 1211 111 1111
Q ss_pred cCCeEEEEEEeeEecCCCceEEEEee-----cCCCCceEEeEEEEcEEEecc
Q 040317 59 EEGVQNVTVTSSSFTNTQNGVRIKLW-----ARPRNGYARNIAFRNIIMNDI 105 (125)
Q Consensus 59 ~~~i~nV~v~n~~~~~t~~gi~Ikt~-----~g~~~G~v~nI~~~ni~~~~v 105 (125)
.+.++||.+.++...+.-+..-+.-. .++......||.+.|++...-
T Consensus 258 ~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 258 APAAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRP 309 (609)
T ss_dssp SCCCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESC
T ss_pred CCccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEee
Confidence 35689999999876665443333311 112345789999999998764
No 44
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.31 E-value=0.00039 Score=56.06 Aligned_cols=102 Identities=16% Similarity=0.279 Sum_probs=64.1
Q ss_pred eEEeeecEEEEeEEEECCCC---------------CCCCCeEEecCcccEEEEeeEEeeCCCc---ee-eccCCC-----
Q 040317 2 AINHCSDILIRNVKIIDPTN---------------SPTTDGIQMQSSTGVTITSSSIMTGEPF---VN-RLGDHL----- 57 (125)
Q Consensus 2 ~i~~c~nV~i~~i~I~~~~~---------------~~ntDGid~~~s~nV~I~n~~i~~gDD~---ig-s~G~~~----- 57 (125)
.|.. +||.|+||+|....+ .+..|+|.+..++||.|+.|.+..+.|- .. -+|...
T Consensus 146 ~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dg 224 (399)
T 2o04_A 146 QIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDG 224 (399)
T ss_dssp EECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCC
T ss_pred EeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecccc
Confidence 4556 899999999987532 1356999999999999999999976432 00 012110
Q ss_pred ---CcCCeEEEEEEeeEecCCCceEEEEeecCC--CCceEEeEEEEcEEEecc
Q 040317 58 ---NEEGVQNVTVTSSSFTNTQNGVRIKLWARP--RNGYARNIAFRNIIMNDI 105 (125)
Q Consensus 58 ---~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~--~~G~v~nI~~~ni~~~~v 105 (125)
....-.+|||++|.|.+...+.-|..-+.. ..| -.+|||-+-.+.++
T Consensus 225 l~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g-~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 225 QTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDG-KLKITLHHNRYKNI 276 (399)
T ss_dssp SEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTT-CCCEEEESCEEEEE
T ss_pred ceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccC-ceeEEEECcEecCC
Confidence 023467999999999876555555432210 001 12566666655554
No 45
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.17 E-value=0.0023 Score=50.77 Aligned_cols=69 Identities=17% Similarity=0.175 Sum_probs=52.0
Q ss_pred eEE-eeecEEEEeEEEECCCC--CCCCCeEEecCcccEEEEeeEEeeCCC-ceeeccCCCCcCCeEEEEEEeeEecCC
Q 040317 2 AIN-HCSDILIRNVKIIDPTN--SPTTDGIQMQSSTGVTITSSSIMTGEP-FVNRLGDHLNEEGVQNVTVTSSSFTNT 75 (125)
Q Consensus 2 ~i~-~c~nV~i~~i~I~~~~~--~~ntDGid~~~s~nV~I~n~~i~~gDD-~igs~G~~~~~~~i~nV~v~n~~~~~t 75 (125)
.|. ..+||.|+||+|..... .+..|||.+..++||.|++|.+....| .+.+ + ...-.+|+|+++.|.+.
T Consensus 127 ~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~-~----~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 127 RVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVL-G----TSADNRVTISYSLIDGR 199 (359)
T ss_dssp EEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEE-C----SSCCEEEEEESCEEECB
T ss_pred EEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceee-c----ccccccEEEECcEecCC
Confidence 344 78999999999997422 245699999999999999999986433 3322 2 23568999999999753
No 46
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=96.97 E-value=0.0088 Score=51.72 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=59.6
Q ss_pred eecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCC---Ccee-ecc-----------------------CCCC
Q 040317 6 CSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGE---PFVN-RLG-----------------------DHLN 58 (125)
Q Consensus 6 c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gD---D~ig-s~G-----------------------~~~~ 58 (125)
|+||+|+|++|.+.. .|+|-+.+|+||+|+||++.... .+.| ++| ....
T Consensus 182 S~NV~I~Nc~I~ntG----DDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~~ 257 (772)
T 3gqn_A 182 SENIWIENCEATGFG----DDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGD 257 (772)
T ss_dssp CEEEEEESCEEESCS----SCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCTT
T ss_pred cceEEEEeeEEEecC----cCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeCC
Confidence 899999999997543 48888888899999999985431 1211 111 1112
Q ss_pred cCCeEEEEEEeeEecCCCceEEEEeecC------CCCceEEeEEEEcEEEecc
Q 040317 59 EEGVQNVTVTSSSFTNTQNGVRIKLWAR------PRNGYARNIAFRNIIMNDI 105 (125)
Q Consensus 59 ~~~i~nV~v~n~~~~~t~~gi~Ikt~~g------~~~G~v~nI~~~ni~~~~v 105 (125)
.+.++||.+.++...+.-+..-+. +.| +..-.+.||.+.|++...-
T Consensus 258 gg~v~NV~I~gnis~~dvrsynir-~iG~h~a~dp~s~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 258 APAAYNISINGHMSVEDVRSYNFR-HIGHHAATAPQSVSAKNIVASNLVSIRP 309 (772)
T ss_dssp SCCCEEEEEEEEEEESCSEEEEEC-CTTSCSSSSCCCSSCEEEEEEEEEEESC
T ss_pred CCccccEEEECCEEeccCeEecce-EEccccCCCCCCccCccEEeecceEEcc
Confidence 355899999876555443322222 111 1123578899998888754
No 47
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=96.96 E-value=0.0017 Score=51.72 Aligned_cols=101 Identities=20% Similarity=0.317 Sum_probs=63.0
Q ss_pred EeeecEEEEeEEEECCCC-C----------CCCCeEEecC-cccEEEEeeEEeeCC---Cceee-ccCCC--------Cc
Q 040317 4 NHCSDILIRNVKIIDPTN-S----------PTTDGIQMQS-STGVTITSSSIMTGE---PFVNR-LGDHL--------NE 59 (125)
Q Consensus 4 ~~c~nV~i~~i~I~~~~~-~----------~ntDGid~~~-s~nV~I~n~~i~~gD---D~igs-~G~~~--------~~ 59 (125)
..++||.|+||+|....+ . ...|+|.+.. ++||.|..|.+..+. ++... +|... ..
T Consensus 111 ~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~ 190 (361)
T 1pe9_A 111 DGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIK 190 (361)
T ss_dssp GTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEEC
T ss_pred CCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeee
Confidence 478999999999997532 1 2378999999 999999999999652 21111 12111 02
Q ss_pred CCeEEEEEEeeEecCCCceEEEEeecCC---CCceEEeEEEEcEEEecc
Q 040317 60 EGVQNVTVTSSSFTNTQNGVRIKLWARP---RNGYARNIAFRNIIMNDI 105 (125)
Q Consensus 60 ~~i~nV~v~n~~~~~t~~gi~Ikt~~g~---~~G~v~nI~~~ni~~~~v 105 (125)
..-.+|+|++|.|.+...++-|..-+.. ..| -..|||-+-.+.++
T Consensus 191 ~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g-~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 191 RGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKG-KLHVTLFNNVFNRV 238 (361)
T ss_dssp TTCEEEEEESCEEEEEEECEEESCCTTCHHHHTT-CCEEEEESCEEEEE
T ss_pred cCCCcEEEEeeEEcCCCceeEecCCCCCcccccC-cceEEEECeEEcCc
Confidence 3468999999999876555545322110 001 12466666666554
No 48
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=95.21 E-value=0.19 Score=43.52 Aligned_cols=102 Identities=17% Similarity=0.105 Sum_probs=58.5
Q ss_pred EEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCc-eeeccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCC
Q 040317 9 ILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPF-VNRLGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARP 87 (125)
Q Consensus 9 V~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~-igs~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~ 87 (125)
..|+|+.|+...-.+..-||+...+++..|+||.|.-.++. -+-.|..++ .=+...++|++|.+...|+++..++
T Consensus 157 r~irNlviD~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e--~GSgg~i~Dl~f~GG~~G~~~gnQQ-- 232 (758)
T 3eqn_A 157 RSVRNFVIDLRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFME--NGSGGFLGDLVFNGGNIGATFGNQQ-- 232 (758)
T ss_dssp EEEEEEEEECTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEEC--SCCCCEEEEEEEESCSEEEEEECSC--
T ss_pred eeecceEEeccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEec--CCCceEEEeeEEeCCceEEEcCCcc--
Confidence 57888888865433345588999999999999999975443 001111110 0122344555555555555553221
Q ss_pred CCceEEe-----------------EEEEcEEEeccCccEEEEeeeC
Q 040317 88 RNGYARN-----------------IAFRNIIMNDIQNPIIIDRNYC 116 (125)
Q Consensus 88 ~~G~v~n-----------------I~~~ni~~~~v~~~i~i~~~y~ 116 (125)
-.+|| .+|++++++++.-+|.++..+.
T Consensus 233 --fT~rnltF~~~~taI~~~w~wgwt~~~~~i~nc~vGi~~~~g~~ 276 (758)
T 3eqn_A 233 --FTVRNLTFNNANTAINAIWNWGWTFQRITINNCQVGFDLTQGGT 276 (758)
T ss_dssp --CEEEEEEEESCSEEEEEEEBSCEEEEEEEEESCSEEEEECCCCS
T ss_pred --eEEeccEEeChHHHHhhhcCceEEEEEeEEECCCccEEEcCCCC
Confidence 22333 4555667777766777766543
No 49
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=93.93 E-value=0.17 Score=41.19 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=19.5
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecC
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQS 32 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~ 32 (125)
+|-|..++++....+ -+||||+.+
T Consensus 261 RnYnLqF~d~~~i~~----~~DG~Dl~a 284 (543)
T 3riq_A 261 RNYRLVFDNITTIQC----YYDGIDVNA 284 (543)
T ss_dssp CCBSCEEEEEEEESC----SSCSCEECS
T ss_pred ceeeEEEeccceEEE----eecceeccC
Confidence 577888999888865 489999987
No 50
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=93.86 E-value=0.32 Score=38.16 Aligned_cols=79 Identities=14% Similarity=0.147 Sum_probs=52.2
Q ss_pred CeEEecCcccEEEEeeEEeeCC---Cc-e--------ee-ccCCCC---cCCeEEEEEEeeEecCCCceEE-EEeecCCC
Q 040317 26 DGIQMQSSTGVTITSSSIMTGE---PF-V--------NR-LGDHLN---EEGVQNVTVTSSSFTNTQNGVR-IKLWARPR 88 (125)
Q Consensus 26 DGid~~~s~nV~I~n~~i~~gD---D~-i--------gs-~G~~~~---~~~i~nV~v~n~~~~~t~~gi~-Ikt~~g~~ 88 (125)
-||.+..++||.|+|..|+..- .. + |. ...+.+ -..-+||.|++|+|.....++. ++ .
T Consensus 106 ~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~--~--- 180 (346)
T 1pxz_A 106 PCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVT--L--- 180 (346)
T ss_dssp CCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEE--S---
T ss_pred ceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeec--c---
Confidence 4799988999999999997421 00 0 10 001110 1235899999999999888763 43 1
Q ss_pred CceEEeEEEEcEEEeccCccEEE
Q 040317 89 NGYARNIAFRNIIMNDIQNPIII 111 (125)
Q Consensus 89 ~G~v~nI~~~ni~~~~v~~~i~i 111 (125)
...+||++|..+.+....+.+
T Consensus 181 --~s~~vTISnn~f~~H~k~~l~ 201 (346)
T 1pxz_A 181 --GSTGITISNNHFFNHHKVMLL 201 (346)
T ss_dssp --SCEEEEEESCEEESEEEEEEE
T ss_pred --CcceEEEEeeEEecCCceeEE
Confidence 157888998888876655555
No 51
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=93.17 E-value=0.38 Score=37.81 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=52.5
Q ss_pred CCeEEecCcccEEEEeeEEeeCC------------CceeeccCCCCcCCeEEEEEEeeEecCCCce-EEEEeecCCCCce
Q 040317 25 TDGIQMQSSTGVTITSSSIMTGE------------PFVNRLGDHLNEEGVQNVTVTSSSFTNTQNG-VRIKLWARPRNGY 91 (125)
Q Consensus 25 tDGid~~~s~nV~I~n~~i~~gD------------D~igs~G~~~~~~~i~nV~v~n~~~~~t~~g-i~Ikt~~g~~~G~ 91 (125)
..||.+..++||.|+|..|+.+. |+++ -..-+||-|++|+|.....+ +-++ .+
T Consensus 82 G~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~-------i~~s~nVWIDHcs~s~~~Dg~idi~--~~----- 147 (340)
T 3zsc_A 82 GGGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYIN-------VENSHHIWIDHITFVNGNDGAVDIK--KY----- 147 (340)
T ss_dssp EEEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEE-------EESCEEEEEESCEEESCSSCSEEEE--TT-----
T ss_pred cCceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEE-------EecCCcEEEEeeeeccCCccceEEe--cC-----
Confidence 35899988899999999999742 2222 12369999999999988666 4443 21
Q ss_pred EEeEEEEcEEEeccCccE
Q 040317 92 ARNIAFRNIIMNDIQNPI 109 (125)
Q Consensus 92 v~nI~~~ni~~~~v~~~i 109 (125)
..+||++|..+.+-....
T Consensus 148 s~~vTISnn~f~~h~k~~ 165 (340)
T 3zsc_A 148 SNYITVSWNKFVDHDKVS 165 (340)
T ss_dssp CEEEEEESCEEESCSBCC
T ss_pred CceEEEECcEeccCceee
Confidence 589999999998765444
No 52
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=92.62 E-value=1.1 Score=36.15 Aligned_cols=80 Identities=21% Similarity=0.276 Sum_probs=49.3
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecCc------------------------ccEEEEeeEEeeCCCceeecc----CC
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQSS------------------------TGVTITSSSIMTGEPFVNRLG----DH 56 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~s------------------------~nV~I~n~~i~~gDD~igs~G----~~ 56 (125)
+|-|..+++-....|- |||+|+.+- .|=.|.|..++ ||+| ..
T Consensus 268 RnYNLQFRdS~~l~pV----WDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~------gsLGVG~GMD 337 (559)
T 2vfm_A 268 RNYNLQFRDSVVIYPV----WDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVR------GALGVGFGMD 337 (559)
T ss_dssp CCBSCEEEEEEEESCS----SCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEE------CCSSEEEEEE
T ss_pred cccceEeecceEEeec----cccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheee------cccceeeeec
Confidence 4567788887777654 899999873 23455555554 3443 22
Q ss_pred CCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCc
Q 040317 57 LNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQN 107 (125)
Q Consensus 57 ~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~ 107 (125)
...+.|+||++++|- ..|+.+-++.. +|+||++.+..+
T Consensus 338 G~G~YVSNitv~DCA----GsG~~~~t~~~---------~FtNi~vID~N~ 375 (559)
T 2vfm_A 338 GKGMYVSNITVEDCA----GSGAYLLTHES---------VFTNIAIIDTNT 375 (559)
T ss_dssp EESCEEEEEEEESCS----SEEEEEEEESC---------EEEEEEEESCCT
T ss_pred CCCceEeeeEehhcc----CcceEEeeccc---------eeeeeEEEeccc
Confidence 212348888888874 45666655542 577777776543
No 53
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=92.44 E-value=1 Score=36.20 Aligned_cols=80 Identities=25% Similarity=0.348 Sum_probs=49.6
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecCc------------------------ccEEEEeeEEeeCCCceeecc----CC
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQSS------------------------TGVTITSSSIMTGEPFVNRLG----DH 56 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~s------------------------~nV~I~n~~i~~gDD~igs~G----~~ 56 (125)
+|-|..+++-....|- |||+|+.+- .|=.|.|..++ ||+| ..
T Consensus 271 RnYNLQFRdS~~l~pV----WDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~------gsLGVG~GMD 340 (559)
T 2v5i_A 271 RNYNLQFRDSVALSPV----WDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVM------NSLGVGLGMD 340 (559)
T ss_dssp CCBSCEEEEEEEESCS----SCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEE------SCSSEEEEEE
T ss_pred cccceEeecceEEeec----cccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheee------cccceeeeec
Confidence 4567788887777654 899999872 24455555555 3443 22
Q ss_pred CCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCc
Q 040317 57 LNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQN 107 (125)
Q Consensus 57 ~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~ 107 (125)
...+.|+||++++|- ..|+.+-++.. +|+||++.+..+
T Consensus 341 G~G~YVSNitv~DCA----GsG~~~~t~~~---------~FtNi~vID~N~ 378 (559)
T 2v5i_A 341 GSGGYVSNVTVQDCA----GAGMLAHTYNR---------VFSNITVIDCNY 378 (559)
T ss_dssp EESCEEEEEEEESCS----SEEEEEEEESC---------EEEEEEEESCCT
T ss_pred CCCceEeeeEehhcc----CcceEEeeccc---------eeeeeEEEeccc
Confidence 212348888888874 45666655542 677777776543
No 54
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=92.44 E-value=0.34 Score=38.71 Aligned_cols=37 Identities=8% Similarity=0.106 Sum_probs=29.1
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeC
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTG 46 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~g 46 (125)
..++++|++++|.+.. ..||.+.+ .+.+|+||.|+..
T Consensus 113 ~~~~~~i~gl~I~n~g----~~GI~v~g-s~~~i~n~~i~~n 149 (400)
T 1ru4_A 113 TGDYWYFKGVEVTRAG----YQGAYVIG-SHNTFENTAFHHN 149 (400)
T ss_dssp CSSCEEEESEEEESCS----SCSEEECS-SSCEEESCEEESC
T ss_pred ECCeEEEEeEEEEeCC----CCcEEEeC-CCcEEEeEEEECC
Confidence 4567999999998753 23999887 6778999999854
No 55
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=91.47 E-value=1.5 Score=36.37 Aligned_cols=80 Identities=21% Similarity=0.276 Sum_probs=49.4
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecCc------------------------ccEEEEeeEEeeCCCceeecc----CC
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQSS------------------------TGVTITSSSIMTGEPFVNRLG----DH 56 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~s------------------------~nV~I~n~~i~~gDD~igs~G----~~ 56 (125)
+|-|..+++-....|- |||+|+.+- .|=.|.|..++ |||| ..
T Consensus 375 rnynlqfrds~~~~pv----wdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~------~slgvg~gmd 444 (666)
T 2xc1_A 375 RNYNLQFRDSVVIYPV----WDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVR------GALGVGFGMD 444 (666)
T ss_dssp CCBSCEEEEEEEECCS----SCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEE------SCSSEEEEEE
T ss_pred cccceeeecceEEeec----cccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheee------cccceeeeec
Confidence 4567788887777654 899999873 23455555554 3443 22
Q ss_pred CCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCc
Q 040317 57 LNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQN 107 (125)
Q Consensus 57 ~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~ 107 (125)
...+.++||++++|- ..|+.+-++.. +|+||++.+..+
T Consensus 445 g~g~yvsnitv~dca----g~g~~~~~~~~---------~ftni~vid~n~ 482 (666)
T 2xc1_A 445 GKGMYVSNITVEDCA----GSGAYLLTHES---------VFTNIAIIDTNT 482 (666)
T ss_dssp EESCEEEEEEEESCS----SEEEEEEEESC---------EEEEEEEESCCT
T ss_pred CCCceEeeeEehhcc----CcceEEeeccc---------eeeeeEEEeccc
Confidence 212348888888874 45666655542 577777776543
No 56
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=91.15 E-value=0.3 Score=38.51 Aligned_cols=107 Identities=12% Similarity=0.200 Sum_probs=64.5
Q ss_pred CeEEeeecEEEEeEEEECCCCC--------CCCCe-EEec-CcccEEEEeeEEeeCCCceeeccCCCCcCCeEEEEEEee
Q 040317 1 MAINHCSDILIRNVKIIDPTNS--------PTTDG-IQMQ-SSTGVTITSSSIMTGEPFVNRLGDHLNEEGVQNVTVTSS 70 (125)
Q Consensus 1 ~~i~~c~nV~i~~i~I~~~~~~--------~ntDG-id~~-~s~nV~I~n~~i~~gDD~igs~G~~~~~~~i~nV~v~n~ 70 (125)
|.+..++||+|+++.+...... +.-|| +|+. .+++|+|++|.|...+ -..-+|....... .+|++.+.
T Consensus 133 I~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~-k~~LiG~sd~~~g-~~vT~hhN 210 (353)
T 1air_A 133 IRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVK-KVGLDGSSSSDTG-RNITYHHN 210 (353)
T ss_dssp EEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEE-ECCEESSSTTCCC-CEEEEESC
T ss_pred EEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCC-ceeEECCCcCCCC-ceEEEEce
Confidence 3577899999999999864211 11365 4664 7899999999998532 2223454321222 68888888
Q ss_pred EecCCC-ceEEEE------------eecCCCC--ce-EEeEEEEcEEEeccCccEE
Q 040317 71 SFTNTQ-NGVRIK------------LWARPRN--GY-ARNIAFRNIIMNDIQNPII 110 (125)
Q Consensus 71 ~~~~t~-~gi~Ik------------t~~g~~~--G~-v~nI~~~ni~~~~v~~~i~ 110 (125)
.|.+.. +.-+++ -|.+ .+ +. =..|.+|+-.+++...|+.
T Consensus 211 ~f~~~~~R~Pr~r~G~~Hv~NN~~~n~~~-~~~~~~~~~~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 211 YYNDVNARLPLQRGGLVHAYNNLYTNITG-SGLNVRQNGQALIENNWFEKAINPVT 265 (353)
T ss_dssp EEEEEEECSCEEESSEEEEESCEEEEESS-CSEEEETTCEEEEESCEEEEEESSEE
T ss_pred EEcCCcCCCCCCcCceEEEEccEEECCCC-ceeccCCCcEEEEEceEEECCCCceE
Confidence 887642 333443 1111 11 10 1257777877777777764
No 57
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=91.15 E-value=1.4 Score=34.31 Aligned_cols=77 Identities=13% Similarity=0.142 Sum_probs=51.2
Q ss_pred CeEEec-CcccEEEEeeEEeeC-----CCceeeccCCCCcCCeEEEEEEeeEecCCC-----------c-eEEEEeecCC
Q 040317 26 DGIQMQ-SSTGVTITSSSIMTG-----EPFVNRLGDHLNEEGVQNVTVTSSSFTNTQ-----------N-GVRIKLWARP 87 (125)
Q Consensus 26 DGid~~-~s~nV~I~n~~i~~g-----DD~igs~G~~~~~~~i~nV~v~n~~~~~t~-----------~-gi~Ikt~~g~ 87 (125)
-||.+. .++||.|+|..|+.. .|+++-.|.. ...-+||-|++|+|.... . .+-+|
T Consensus 86 ~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~--~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~----- 158 (330)
T 2qy1_A 86 FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNS--SGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMK----- 158 (330)
T ss_dssp SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBT--TBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEE-----
T ss_pred eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeecccc--CcccccEEEEeEEEEccccccccCCcceeecccccc-----
Confidence 489998 789999999999964 4555533321 135799999999995332 1 12222
Q ss_pred CCceEEeEEEEcEEEeccCccEEE
Q 040317 88 RNGYARNIAFRNIIMNDIQNPIII 111 (125)
Q Consensus 88 ~~G~v~nI~~~ni~~~~v~~~i~i 111 (125)
....+||++|..+.+-.....+
T Consensus 159 --~~s~~VTISnn~f~~h~k~~L~ 180 (330)
T 2qy1_A 159 --KGVHHVTVSYNYVYNYQKVALN 180 (330)
T ss_dssp --SSCEEEEEESCEEEEEEECCEE
T ss_pred --cCcceEEEEcceeccCCeEEEE
Confidence 1246999999998765444433
No 58
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=90.03 E-value=1 Score=35.42 Aligned_cols=86 Identities=9% Similarity=0.042 Sum_probs=51.8
Q ss_pred CeEEecCcccEEEEeeEEeeCCCceee------ccCCCC---cCCeEEEEEEeeEecCCCce-----EEE----EeecCC
Q 040317 26 DGIQMQSSTGVTITSSSIMTGEPFVNR------LGDHLN---EEGVQNVTVTSSSFTNTQNG-----VRI----KLWARP 87 (125)
Q Consensus 26 DGid~~~s~nV~I~n~~i~~gDD~igs------~G~~~~---~~~i~nV~v~n~~~~~t~~g-----i~I----kt~~g~ 87 (125)
-||.+..++||.|+|..|+...||.-. .+.+.+ -..-+||-|++|+|.....+ .++ ...+|.
T Consensus 96 ~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl 175 (355)
T 1pcl_A 96 GSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGA 175 (355)
T ss_pred CEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccc
Confidence 388888889999999999976655311 001111 23358899999999864211 110 001110
Q ss_pred --CCceEEeEEEEcEEEeccCccEEE
Q 040317 88 --RNGYARNIAFRNIIMNDIQNPIII 111 (125)
Q Consensus 88 --~~G~v~nI~~~ni~~~~v~~~i~i 111 (125)
-.....+||++|..+.+......+
T Consensus 176 ~Di~~~s~~VTiS~n~f~~h~k~~Li 201 (355)
T 1pcl_A 176 LDIKKGSDYVTISYSRFELHDKTILI 201 (355)
T ss_pred eeeecCCCcEEEEeeEEcCCCceEEe
Confidence 001257999999999887655444
No 59
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=89.49 E-value=0.98 Score=36.37 Aligned_cols=50 Identities=18% Similarity=0.352 Sum_probs=35.3
Q ss_pred CeEEecCcccEEEEeeEEeeCCCceee-------cc---CCCC---cCCeEEEEEEeeEecCC
Q 040317 26 DGIQMQSSTGVTITSSSIMTGEPFVNR-------LG---DHLN---EEGVQNVTVTSSSFTNT 75 (125)
Q Consensus 26 DGid~~~s~nV~I~n~~i~~gDD~igs-------~G---~~~~---~~~i~nV~v~n~~~~~t 75 (125)
-||.+..++||.|+|..|+...||... .| .+.+ -..-+||-|++|+|...
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~ 210 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDG 210 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECT
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecC
Confidence 388888889999999999987776310 00 1111 23368999999999864
No 60
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=88.88 E-value=5.3 Score=29.03 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=28.3
Q ss_pred ecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEe-eCCCc
Q 040317 7 SDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIM-TGEPF 49 (125)
Q Consensus 7 ~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~-~gDD~ 49 (125)
+..+++|+.|-.+ ..|||+..+ +.+|+|++.. .+.|+
T Consensus 52 ~GaTLkNvIIG~~----~~dGIHC~G--~ctl~NVwwedVcEDA 89 (196)
T 3t9g_A 52 KGANLKNVIIGAP----GCDGIHCYG--DNVVENVVWEDVGEDA 89 (196)
T ss_dssp TTCEEEEEEECSC----CTTCEEECS--SEEEEEEEESSCCSCS
T ss_pred CCCEEEEEEECCC----CcCcEEEcC--CEeEEEEEeeeeecee
Confidence 4678899988654 379999975 6789998885 47777
No 61
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=87.78 E-value=0.93 Score=35.75 Aligned_cols=67 Identities=6% Similarity=0.118 Sum_probs=44.2
Q ss_pred CeEEec-CcccEEEEeeEEeeC-------CCceeeccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEE
Q 040317 26 DGIQMQ-SSTGVTITSSSIMTG-------EPFVNRLGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAF 97 (125)
Q Consensus 26 DGid~~-~s~nV~I~n~~i~~g-------DD~igs~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~ 97 (125)
-||.+. .++||.|+|..|+.. .|++.- ..-+||-|++|+|.....++.-- + .....+||+
T Consensus 124 ~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i-------~~s~nVwIDHcs~s~~~d~~~~~---g--~~~s~~VTI 191 (359)
T 1idk_A 124 KGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITL-------DDCDLVWIDHVTTARIGRQHYVL---G--TSADNRVSL 191 (359)
T ss_dssp CCEEECTTCEEEEEESCEEEEECTTEETSCCSEEE-------CSCEEEEEESCEEEEESSCSEEE---C--CCTTCEEEE
T ss_pred ceEEEecCCCcEEEeCeEEEcccccccccCCceee-------cCCCcEEEEeeEeecCCCCcEEe---c--ccCcceEEE
Confidence 478887 789999999999963 355542 23689999999998654443211 0 011356777
Q ss_pred EcEEEec
Q 040317 98 RNIIMND 104 (125)
Q Consensus 98 ~ni~~~~ 104 (125)
+|..+.+
T Consensus 192 Snn~f~~ 198 (359)
T 1idk_A 192 TNNYIDG 198 (359)
T ss_dssp ESCEEEC
T ss_pred ECcEecC
Confidence 7777764
No 62
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=87.03 E-value=1.7 Score=34.72 Aligned_cols=85 Identities=13% Similarity=0.164 Sum_probs=50.9
Q ss_pred CeEEecCcccEEEEeeEEeeCCCceee----c---c---CCCC---cCCeEEEEEEeeEecCCCc-----eEEE----Ee
Q 040317 26 DGIQMQSSTGVTITSSSIMTGEPFVNR----L---G---DHLN---EEGVQNVTVTSSSFTNTQN-----GVRI----KL 83 (125)
Q Consensus 26 DGid~~~s~nV~I~n~~i~~gDD~igs----~---G---~~~~---~~~i~nV~v~n~~~~~t~~-----gi~I----kt 83 (125)
-||.+.. +||.|+|..|+...||.-. - | .+.+ -...+||-|++|+|..... +.++ ..
T Consensus 143 ~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 143 GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 3788888 9999999999987665310 0 0 1111 2346899999999986421 0010 00
Q ss_pred ecCC--CCceEEeEEEEcEEEeccCccEEE
Q 040317 84 WARP--RNGYARNIAFRNIIMNDIQNPIII 111 (125)
Q Consensus 84 ~~g~--~~G~v~nI~~~ni~~~~v~~~i~i 111 (125)
.+|. -.....+||++|..+.+......|
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~Li 251 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIF 251 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEE
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEe
Confidence 0100 001247999999999876554444
No 63
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=85.86 E-value=2.2 Score=33.67 Aligned_cols=86 Identities=10% Similarity=0.163 Sum_probs=52.6
Q ss_pred CeEEe---cCcccEEEEeeEEeeCCCceee------ccCCCC----cCCeEEEEEEeeEecCCCc---------eEEEEe
Q 040317 26 DGIQM---QSSTGVTITSSSIMTGEPFVNR------LGDHLN----EEGVQNVTVTSSSFTNTQN---------GVRIKL 83 (125)
Q Consensus 26 DGid~---~~s~nV~I~n~~i~~gDD~igs------~G~~~~----~~~i~nV~v~n~~~~~t~~---------gi~Ikt 83 (125)
-||.+ ..++||.|+|..|+...||.-. .+.+.+ .+.-+||-|++|+|..... |-....
T Consensus 103 ~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~ 182 (361)
T 1pe9_A 103 GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQ 182 (361)
T ss_dssp SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCC
T ss_pred CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceee
Confidence 48899 6789999999999987666321 111111 2237899999999986521 100000
Q ss_pred ecCC--CCceEEeEEEEcEEEeccCccEEE
Q 040317 84 WARP--RNGYARNIAFRNIIMNDIQNPIII 111 (125)
Q Consensus 84 ~~g~--~~G~v~nI~~~ni~~~~v~~~i~i 111 (125)
.+|- -.....+||+||..+.+......+
T Consensus 183 ~DgllDi~~~s~~VTiS~n~f~~h~k~~Li 212 (361)
T 1pe9_A 183 HDGALDIKRGSDYVTISNSLIDQHDKTMLI 212 (361)
T ss_dssp CCCSEEECTTCEEEEEESCEEEEEEECEEE
T ss_pred ccceeeeecCCCcEEEEeeEEcCCCceeEe
Confidence 1110 001257999999999886555444
No 64
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=84.72 E-value=2.3 Score=34.23 Aligned_cols=35 Identities=6% Similarity=0.166 Sum_probs=27.4
Q ss_pred eecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEee
Q 040317 6 CSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMT 45 (125)
Q Consensus 6 c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~ 45 (125)
.++++|+++.+.... =||.+..+++++|++.+|..
T Consensus 170 ~d~~~I~nn~i~~~~-----fGI~l~~a~~~~I~~N~I~e 204 (410)
T 2inu_A 170 NDSFHITGMGFVYLE-----HALIVRGADALRVNDNMIAE 204 (410)
T ss_dssp EESCEEESCEEESCS-----EEEEETTEESCEEESCEEES
T ss_pred CCeEEEECCEEeccc-----EEEEEccCCCcEEECCEEEe
Confidence 677788888888753 48888888888888888873
No 65
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=84.15 E-value=2.9 Score=32.56 Aligned_cols=87 Identities=17% Similarity=0.213 Sum_probs=55.8
Q ss_pred EeEEEECCCCC--CCCCeEEecCcccEEEEeeEEeeC----CCceeeccCCCCcCCeEEEEEEeeEecCCC---------
Q 040317 12 RNVKIIDPTNS--PTTDGIQMQSSTGVTITSSSIMTG----EPFVNRLGDHLNEEGVQNVTVTSSSFTNTQ--------- 76 (125)
Q Consensus 12 ~~i~I~~~~~~--~ntDGid~~~s~nV~I~n~~i~~g----DD~igs~G~~~~~~~i~nV~v~n~~~~~t~--------- 76 (125)
.+++|...... ...-||.+..++||.|+|..|+.. .|++.-. +.-+||-|++|+|..+.
T Consensus 79 sn~TI~G~g~~~~i~G~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~------~~s~nVWIDH~s~s~~~~g~~~~~~~ 152 (326)
T 3vmv_A 79 KNISIIGVGTNGEFDGIGIRLSNAHNIIIQNVSIHHVREGEGTAIEVT------DDSKNVWIDHNEFYSEFPGNGDSDYY 152 (326)
T ss_dssp EEEEEEECTTCCEEESCCEEEESEEEEEEESCEEECCCSTTSCSEEEE------TTCEEEEEESCEEECCSSTTSCTTSS
T ss_pred CCeEEEecCCCeEEeCcEEEEEecceEEEECeEEEcCCCCCCCeEEEe------cCCCcEEEEeeEEeccccCCcCcccc
Confidence 36666654221 123488888889999999999964 3444311 23689999999996432
Q ss_pred c-eEEEEeecCCCCceEEeEEEEcEEEeccCccEEE
Q 040317 77 N-GVRIKLWARPRNGYARNIAFRNIIMNDIQNPIII 111 (125)
Q Consensus 77 ~-gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i 111 (125)
. .+-+| ....+||++|..+.+-.....+
T Consensus 153 Dgl~di~-------~~s~~VTISnn~f~~h~k~~Li 181 (326)
T 3vmv_A 153 DGLVDMK-------RNAEYITVSWNKFENHWKTMLV 181 (326)
T ss_dssp CCSEEEC-------TTCEEEEEESCEEEEEEECEEE
T ss_pred CcceEec-------CCCceEEEEceEEecCceEEEE
Confidence 1 12222 1257999999999876554444
No 66
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=83.88 E-value=2.6 Score=33.10 Aligned_cols=67 Identities=6% Similarity=0.065 Sum_probs=42.9
Q ss_pred CeEEec-CcccEEEEeeEEeeC-------CCceeeccCCCCcCCeEEEEEEeeEecCCCceEEEEeecCCCCceEEeEEE
Q 040317 26 DGIQMQ-SSTGVTITSSSIMTG-------EPFVNRLGDHLNEEGVQNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAF 97 (125)
Q Consensus 26 DGid~~-~s~nV~I~n~~i~~g-------DD~igs~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~ 97 (125)
-||.+. .++||.|+|..|+.. +|++.-. .-+||-|++|+|.....++..- + .....+||+
T Consensus 124 ~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~-------~s~nvwIDHcs~s~~~d~~~~~---~--~~~s~~vTI 191 (359)
T 1qcx_A 124 KGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVD-------DSDLVWIDHVTTARIGRQHIVL---G--TSADNRVTI 191 (359)
T ss_dssp CCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEE-------SCCCEEEESCEEEEESSCSEEE---C--SSCCEEEEE
T ss_pred ceEEEecCCCCEEEeCcEEEecCCcccccCceeEec-------CCceEEEEeeEeeccCcCceee---c--ccccccEEE
Confidence 478886 789999999999964 3444422 2468888888887654433210 1 012467777
Q ss_pred EcEEEec
Q 040317 98 RNIIMND 104 (125)
Q Consensus 98 ~ni~~~~ 104 (125)
+|..+.+
T Consensus 192 Snn~f~~ 198 (359)
T 1qcx_A 192 SYSLIDG 198 (359)
T ss_dssp ESCEEEC
T ss_pred ECcEecC
Confidence 7777764
No 67
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=77.62 E-value=12 Score=30.15 Aligned_cols=39 Identities=26% Similarity=0.342 Sum_probs=27.0
Q ss_pred ecEEEEeEEEECC-----CCC-CC-CCeEEecC-cccEEEEeeEEee
Q 040317 7 SDILIRNVKIIDP-----TNS-PT-TDGIQMQS-STGVTITSSSIMT 45 (125)
Q Consensus 7 ~nV~i~~i~I~~~-----~~~-~n-tDGid~~~-s~nV~I~n~~i~~ 45 (125)
.+|+|+++.|... ... .+ .-||.+.. ..+++|+++.+..
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~ 182 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY 182 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec
Confidence 4677777777775 211 11 22888885 7889999999984
No 68
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=75.61 E-value=20 Score=25.94 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=54.9
Q ss_pred ecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEe-eCCCceeeccC-----------CCC-----cCCeEEEEEEe
Q 040317 7 SDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIM-TGEPFVNRLGD-----------HLN-----EEGVQNVTVTS 69 (125)
Q Consensus 7 ~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~-~gDD~igs~G~-----------~~~-----~~~i~nV~v~n 69 (125)
+..+++|+.|-++ ..|||+..+ +.+|+|++.. .+.|++.-.|. ... ..+--.+.|+|
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 4678999988654 489999986 5899999886 47777321110 000 01112355555
Q ss_pred eEecCCCceEEEEeecCCCCceEEeEEEEcEEEeccCccEEEEeee
Q 040317 70 SSFTNTQNGVRIKLWARPRNGYARNIAFRNIIMNDIQNPIIIDRNY 115 (125)
Q Consensus 70 ~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni~~~~v~~~i~i~~~y 115 (125)
.+.. ..|=..+|-.+ . -.-|+|.++|+++.+....|+..-.|
T Consensus 122 F~~~--~~GKl~RScGn-c-~~~r~v~i~~v~~~~~k~~i~~~ds~ 163 (197)
T 1ee6_A 122 FRAD--DIGKLVRQNGG-T-TYKVVMNVENCNISRVKDAILRTDSS 163 (197)
T ss_dssp CEEE--EEEEEEEECTT-C-CSCEEEEEESCEEEEEEEEEEECCCT
T ss_pred EEEc--cCCEEEEcCCC-C-ccceEEEEeceEEECceEEEEEecCC
Confidence 5443 23333333221 1 12367777777777765555444443
No 69
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=75.44 E-value=2.7 Score=34.58 Aligned_cols=49 Identities=16% Similarity=0.121 Sum_probs=29.6
Q ss_pred cccEEEEeeEEee---------CCCc--ee-eccCCCCcCCeEEEEEEeeEecCCCceEEEE
Q 040317 33 STGVTITSSSIMT---------GEPF--VN-RLGDHLNEEGVQNVTVTSSSFTNTQNGVRIK 82 (125)
Q Consensus 33 s~nV~I~n~~i~~---------gDD~--ig-s~G~~~~~~~i~nV~v~n~~~~~t~~gi~Ik 82 (125)
+++|.|++|.... -..| +. -.|... .+..+||.|++|.|.-.+.-|.||
T Consensus 178 fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r~gL~f-~eSCrNV~IsnC~FsVGDdciaik 238 (514)
T 2vbk_A 178 FDNVMVNEVETAYLMQGLWHSKFIACQAGTCRVGLHF-LGQCVSVSVSSCHFSRGNYSADES 238 (514)
T ss_dssp EESCEEEEEEEEEEEESEEEEEEESCEEEEEEEEEEE-ESCCEEEEEESCEEECTTSCCTTC
T ss_pred eeeEEEEeEEEeEeccCcEEEeEeccCceecccCccc-cCCCCeEEEeccEEecCcceeeee
Confidence 6789999986521 1122 00 012222 357999999999998765544444
No 70
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=69.24 E-value=11 Score=29.78 Aligned_cols=42 Identities=10% Similarity=0.059 Sum_probs=24.7
Q ss_pred cEEEEeEEEECCCC----CCCCCeEEecCc--ccEEEEeeEEee-CCCc
Q 040317 8 DILIRNVKIIDPTN----SPTTDGIQMQSS--TGVTITSSSIMT-GEPF 49 (125)
Q Consensus 8 nV~i~~i~I~~~~~----~~ntDGid~~~s--~nV~I~n~~i~~-gDD~ 49 (125)
+.+|+++.+....+ ..+.|||.+..+ +..+|++|.+.. .||.
T Consensus 162 ~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddG 210 (400)
T 1ru4_A 162 YNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDG 210 (400)
T ss_dssp SCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCS
T ss_pred CeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCc
Confidence 66777887776543 135677766533 556666666643 3444
No 71
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=60.32 E-value=43 Score=25.87 Aligned_cols=46 Identities=9% Similarity=0.093 Sum_probs=32.4
Q ss_pred EeeecEEEEeEEEECCCC----------------CCCCCeEEe-cCcccEEEEeeEEeeCCCc
Q 040317 4 NHCSDILIRNVKIIDPTN----------------SPTTDGIQM-QSSTGVTITSSSIMTGEPF 49 (125)
Q Consensus 4 ~~c~nV~i~~i~I~~~~~----------------~~ntDGid~-~~s~nV~I~n~~i~~gDD~ 49 (125)
..+++++++||+|.+... ....-++-+ ..+.++.+.+|.|...-|.
T Consensus 93 v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDT 155 (342)
T 2nsp_A 93 ISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQAT 155 (342)
T ss_dssp ECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTC
T ss_pred EECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccce
Confidence 457899999999998641 012225521 3468999999999986666
No 72
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=58.08 E-value=33 Score=28.13 Aligned_cols=13 Identities=15% Similarity=-0.345 Sum_probs=7.6
Q ss_pred ecEEEEeEEEECC
Q 040317 7 SDILIRNVKIIDP 19 (125)
Q Consensus 7 ~nV~i~~i~I~~~ 19 (125)
++++|+++.|...
T Consensus 126 ~~~~I~nn~I~~~ 138 (506)
T 1dbg_A 126 SYNRITACVFDCF 138 (506)
T ss_dssp SSCEEESCEEESC
T ss_pred CCeEEEeeEEEcC
Confidence 4556666666654
No 73
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=54.64 E-value=36 Score=26.09 Aligned_cols=44 Identities=9% Similarity=0.120 Sum_probs=32.7
Q ss_pred eeecEEEEeEEEECCCCC--CCCCeEEecCcccEEEEeeEEeeCCCc
Q 040317 5 HCSDILIRNVKIIDPTNS--PTTDGIQMQSSTGVTITSSSIMTGEPF 49 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~--~ntDGid~~~s~nV~I~n~~i~~gDD~ 49 (125)
..++++++||+|.+.... ...-+|.+. +.++.+.||.|...-|.
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDT 137 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDS 137 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTC
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECcccee
Confidence 467899999999986432 234467764 58899999999876666
No 74
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=49.12 E-value=18 Score=27.81 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=32.5
Q ss_pred eeecEEEEeEEEECCCCC--CCCCeEEecCcccEEEEeeEEeeCCCc
Q 040317 5 HCSDILIRNVKIIDPTNS--PTTDGIQMQSSTGVTITSSSIMTGEPF 49 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~--~ntDGid~~~s~nV~I~n~~i~~gDD~ 49 (125)
..++++++||+|.+.... ...-+|.+. +.++.+.||.|...-|.
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDT 133 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDT 133 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTC
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccc
Confidence 567899999999986432 234467765 58899999999876666
No 75
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=30.89 E-value=44 Score=26.89 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=23.4
Q ss_pred EEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcE
Q 040317 63 QNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNI 100 (125)
Q Consensus 63 ~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni 100 (125)
.|=.++|+.+.++ -|+.+.. + |+||+|+||+.+++
T Consensus 317 ~NHliDnllv~gs-LGVG~GM-D-G~G~YVSNitv~DC 351 (559)
T 2vfm_A 317 LNHLIDNLLVRGA-LGVGFGM-D-GKGMYVSNITVEDC 351 (559)
T ss_dssp CCCEEEEEEEECC-SSEEEEE-E-EESCEEEEEEEESC
T ss_pred chhhhhhheeecc-cceeeee-c-CCCceEeeeEehhc
Confidence 4557788887776 3444443 3 36799998887775
No 76
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=30.73 E-value=45 Score=26.84 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=23.5
Q ss_pred EEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcE
Q 040317 63 QNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNI 100 (125)
Q Consensus 63 ~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni 100 (125)
.|=.++|+.+.++ -|+.+.. + |+||+|+||+.+++
T Consensus 320 ~NHliDnllv~gs-LGVG~GM-D-G~G~YVSNitv~DC 354 (559)
T 2v5i_A 320 NNHLVDNILVMNS-LGVGLGM-D-GSGGYVSNVTVQDC 354 (559)
T ss_dssp CCCEEEEEEEESC-SSEEEEE-E-EESCEEEEEEEESC
T ss_pred chhhhhhheeecc-cceeeee-c-CCCceEeeeEehhc
Confidence 4557788888776 3444443 3 36799998888775
No 77
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=27.13 E-value=2e+02 Score=22.35 Aligned_cols=46 Identities=7% Similarity=0.078 Sum_probs=32.6
Q ss_pred EeeecEEEEeEEEECCCC----------------CCCCCeEEec-CcccEEEEeeEEeeCCCc
Q 040317 4 NHCSDILIRNVKIIDPTN----------------SPTTDGIQMQ-SSTGVTITSSSIMTGEPF 49 (125)
Q Consensus 4 ~~c~nV~i~~i~I~~~~~----------------~~ntDGid~~-~s~nV~I~n~~i~~gDD~ 49 (125)
...++++++||+|.+... ..-.-++.+. ...++.+.+|.|...-|-
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDT 181 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDT 181 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSC
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccc
Confidence 456889999999998742 1123356554 468899999999876565
No 78
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=26.09 E-value=2.2e+02 Score=21.64 Aligned_cols=39 Identities=13% Similarity=0.070 Sum_probs=29.2
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCc
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPF 49 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~ 49 (125)
.++.+.++++++... -|++-....+ ..+++|+|.-.=|-
T Consensus 120 ~~d~~~f~~c~f~g~-----QDTLy~~~~r-~~~~~c~I~G~vDF 158 (319)
T 1gq8_A 120 GSDLSAFYRCDILAY-----QDSLYVHSNR-QFFINCFIAGTVDF 158 (319)
T ss_dssp CCTTEEEEEEEEECS-----TTCEEECSSE-EEEESCEEEESSSC
T ss_pred cCCcEEEEEeEECcc-----ceeeeecCcc-EEEEecEEEeeeeE
Confidence 467889999999986 4677777655 48888888865555
No 79
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=25.44 E-value=61 Score=27.01 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=23.4
Q ss_pred EEEEEEeeEecCCCceEEEEeecCCCCceEEeEEEEcE
Q 040317 63 QNVTVTSSSFTNTQNGVRIKLWARPRNGYARNIAFRNI 100 (125)
Q Consensus 63 ~nV~v~n~~~~~t~~gi~Ikt~~g~~~G~v~nI~~~ni 100 (125)
.|=.++|+.+.++ -|+.+.. + |+||+|+||+.+++
T Consensus 424 ~nhlidn~~v~~s-lgvg~gm-d-g~g~yvsnitv~dc 458 (666)
T 2xc1_A 424 LNHLIDNLLVRGA-LGVGFGM-D-GKGMYVSNITVEDC 458 (666)
T ss_dssp CCCEEEEEEEESC-SSEEEEE-E-EESCEEEEEEEESC
T ss_pred chhhhhhheeecc-cceeeee-c-CCCceEeeeEehhc
Confidence 3557788887776 3444443 3 36799998887775
No 80
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=22.10 E-value=2.6e+02 Score=22.69 Aligned_cols=21 Identities=10% Similarity=0.381 Sum_probs=13.5
Q ss_pred eEEEEEEeeEecCCCc-eEEEE
Q 040317 62 VQNVTVTSSSFTNTQN-GVRIK 82 (125)
Q Consensus 62 i~nV~v~n~~~~~t~~-gi~Ik 82 (125)
+++++|.+.+|.+... ||.|.
T Consensus 337 ~~~~~I~~Ntfi~n~~~gI~~~ 358 (506)
T 1dbg_A 337 AFDMLIANNAFINVNGYAIHFN 358 (506)
T ss_dssp CBSEEEESCEEESCSSEEEESS
T ss_pred ccCcEEECCEEECCccccEEEc
Confidence 4666666666666654 66665
No 81
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=21.99 E-value=2.6e+02 Score=21.15 Aligned_cols=39 Identities=15% Similarity=0.083 Sum_probs=28.0
Q ss_pred eeecEEEEeEEEECCCCCCCCCeEEecCcccEEEEeeEEeeCCCc
Q 040317 5 HCSDILIRNVKIIDPTNSPTTDGIQMQSSTGVTITSSSIMTGEPF 49 (125)
Q Consensus 5 ~c~nV~i~~i~I~~~~~~~ntDGid~~~s~nV~I~n~~i~~gDD~ 49 (125)
.++.+.++++++... -|++-..+.++ .+++|+|.-.=|-
T Consensus 116 ~~d~~~f~~c~f~g~-----QDTLy~~~~r~-~~~~c~I~G~vDF 154 (317)
T 1xg2_A 116 GADMSVINRCRIDAY-----QDTLYAHSQRQ-FYRDSYVTGTVDF 154 (317)
T ss_dssp CCTTEEEESCEEECS-----TTCEEECSSEE-EEESCEEEESSSC
T ss_pred eCCcEEEEEeEeCcc-----ccceeecCccE-EEEeeEEEeceeE
Confidence 467788899999875 46777766554 7888888755554
Done!