BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040319
(812 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800
OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1
Length = 896
Score = 1031 bits (2666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/815 (60%), Positives = 626/815 (76%), Gaps = 4/815 (0%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
FF LRLS Q +V + KA+HAS +KL E+ TR GN LIS YLKLG +A +F LS
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV-PNEHSFVAILTACIRLLELELGF 119
SP VVS+T+LISG ++L E EA+++FFRMR G+V PNE++FVAILTAC+R+ LG
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGI 201
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFS-FCLDYLLKLFDELPHKDTVSWNTVISSVVN 178
QIH LIVK G ++SVFV+N+LM LY K S D +LKLFDE+P +D SWNTV+SS+V
Sbjct: 202 QIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVK 261
Query: 179 EFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLS 238
E + KAF+LF +M R GF VD FT+STLL++CT VL+ GR +H AIRIGL LS
Sbjct: 262 EGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELS 321
Query: 239 VNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKN 298
VNNALIGFY+K +K V +L E M D +T TE+I AYM FG VD AVEIF + EKN
Sbjct: 322 VNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKN 381
Query: 299 SVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHG 358
+++YNAL+AG+C+NG ++AL LF +L+ G+ LT+F+LTS V+ACGL+ E K+SEQIHG
Sbjct: 382 TITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHG 441
Query: 359 FVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKP 418
F +KFG N CI+ ALLDM TRC RMADAE+MF +WP++ D S TS+I GYAR+G P
Sbjct: 442 FCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLP 501
Query: 419 EHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANS 478
+ A+ LFH++ E + DE++LT +L VCGTLGF EMG QIH YALK G+ SD+ + NS
Sbjct: 502 DKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNS 561
Query: 479 MVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPD 538
++SMY KCC+ +AIK FN M HD++SWN LI+ ++L R GDEALA+WS M + IKPD
Sbjct: 562 LISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPD 621
Query: 539 AITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEE 598
IT L+ISA+RYT N + SCR LFLSMKTIY+IEPT+EHY + V VLG+WG LEEAE+
Sbjct: 622 IITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAED 681
Query: 599 TINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGR 658
TIN+MP QP+VSV RALLDSCRI NT++ KRVAK IL+ +P+ P+ YIL SN+YS+SG
Sbjct: 682 TINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGF 741
Query: 659 WHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLK 718
WH SE++RE+MRE+G+RKHP++SWIIH+NK+HSF+ RD SHP+EKDIY GLEILI+ECLK
Sbjct: 742 WHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLK 801
Query: 719 AGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPA-GQPVRIVKNILTCGDCHS 777
GY P+T +VL EV+E KK FLF+HSAKLA TYG+L++ G+PVR++KN++ CGDCH
Sbjct: 802 VGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHE 861
Query: 778 FLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
F KY+SVV +REI LRD+SGFHHF+NG+CSC+D W
Sbjct: 862 FFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 289/817 (35%), Positives = 443/817 (54%), Gaps = 55/817 (6%)
Query: 13 EVSLAKAIHASLIKLLLEQDT-RFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLI 71
++ L K IHA + K D+ N L++ Y K G YK+F +S N VS+ SLI
Sbjct: 112 DMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 171
Query: 72 SGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELE---LGFQIHALIVKM 128
S L + E A+E F M E + P+ + V+++TAC L E +G Q+HA ++
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 129 GCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFEL 188
G ++S F+ N L+ +YGK + L +D V+WNTV+SS+ + +A E
Sbjct: 232 GELNS-FIINTLVAMYGKLGKLASSKV-LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 189 FRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIG-LGANLSVNNALIGFY 247
R+M + G D FTIS++L AC+ +L G+ +HA+A++ G L N V +AL+ Y
Sbjct: 290 LREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 248 TKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLA 307
C +V +FD M ++ +NA++A
Sbjct: 349 CNCKQVLS-------------------------------GRRVFDGMFDRKIGLWNAMIA 377
Query: 308 GYCKNGKAMEALGLFVKLLEE-GLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLG 366
GY +N EAL LF+ + E GL+ T+ VV AC E IHGFV+K GL
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 367 SNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFH 426
+ ++ L+DM +R G++ A ++F + DR D + W +MI GY S E A+LL H
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDR-DLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 427 QSQ----------SEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVA 476
+ Q S ++ P+ I L ++L C L GK+IH+YA+K ++D+ V
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 477 NSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIK 536
+++V MY KC + + K F+++P ++++WN +I + +H G EA+ + M +K
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 537 PDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEA 596
P+ +TF+ + +A ++ +VD ++F MK Y +EP+S+HYA +V +LG G ++EA
Sbjct: 616 PNEVTFISVFAACSHS--GMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 597 EETINNMPFQ-PKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSS 655
+ +N MP K W +LL + RI N IG+ A++++ +EP + Y+L++N+YSS
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733
Query: 656 SGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILE 715
+G W + VR +M+E+G RK P SWI H ++VH F D SHP+ + + LE L
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 716 CLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDC 775
K GYVPDTS VLH VEE +K+ L HS KLA +G+L T G +R+ KN+ C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853
Query: 776 HSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
H K++S + REI LRD FH F NG CSC DYW
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 248/485 (51%), Gaps = 56/485 (11%)
Query: 82 EAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMG-CVDSVFVTNAL 140
EA+ + M GI P+ ++F A+L A L ++ELG QIHA + K G VDSV V N L
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL 139
Query: 141 MGLYGKFSFCLDY--LLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGF 198
+ LY K C D+ + K+FD + ++ VSWN++ISS+ + ++E A E FR M +N
Sbjct: 140 VNLYRK---CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN-V 195
Query: 199 TVDYFTISTLLTACTGCFV---LMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKD 255
FT+ +++TAC+ + LM G+ VHA+ +R G N + N L+ Y K G++
Sbjct: 196 EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLAS 254
Query: 256 VVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKA 315
LL FG DL V++N +L+ C+N +
Sbjct: 255 SKVLLG------------------SFGGRDL-------------VTWNTVLSSLCQNEQL 283
Query: 316 MEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFG-LGSNDCIEAA 374
+EAL +++ EG+ EFT++SV+ AC + + +++H + +K G L N + +A
Sbjct: 284 LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSA 343
Query: 375 LLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATV 434
L+DM C ++ ++F DR +W +MI GY+++ + A+LLF + A +
Sbjct: 344 LVDMYCNCKQVLSGRRVFDGM-FDRKIG-LWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 435 VPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIK 494
+ + + V+ C G + IH + +K G D V N+++ MY + + A++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 495 AFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSME-----------KASIKPDAITFV 543
F KM D+V+WN +I G++ ++AL + M+ + S+KP++IT +
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 544 LIISA 548
I+ +
Sbjct: 522 TILPS 526
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 133/269 (49%), Gaps = 16/269 (5%)
Query: 9 VQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFT 68
V+ G S +AIH ++K L++D N L+ Y +LG + A +IF + ++V++
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 69 SLISGLAKLGREEEAIELFFRMR------SEG-----IVPNEHSFVAILTACIRLLELEL 117
++I+G E+A+ L +M+ S+G + PN + + IL +C L L
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 118 GFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVV 177
G +IHA +K V V +AL+ +Y K CL K+FD++P K+ ++WN +I +
Sbjct: 536 GKEIHAYAIKNNLATDVAVGSALVDMYAKCG-CLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 178 NEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANL 237
++A +L R M G + T ++ AC+ ++ EG + + ++ G
Sbjct: 595 MHGNGQEAIDLLR-MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEP 652
Query: 238 SVNN--ALIGFYTKCGRVKDVVALLERMP 264
S ++ ++ + GR+K+ L+ MP
Sbjct: 653 SSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 113/248 (45%), Gaps = 8/248 (3%)
Query: 305 LLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFG 364
LL ++ EA+ +V ++ G+ + +++ A + + +L +QIH V KFG
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 365 LGSNDCIEA-ALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAIL 423
G + A L+++ +CG K+F R + + W S+I K E A+
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEMALE 185
Query: 424 LFHQSQSEATVVPDEIALTSVLGVCGTLGFHE---MGKQIHSYALKTGFSSDLGVANSMV 480
F E V P L SV+ C L E MGKQ+H+Y L+ G + + N++V
Sbjct: 186 AFRCMLDE-NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLV 243
Query: 481 SMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAI 540
+MY K ++++ D+V+WN +++ + Q EAL M ++PD
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 541 TFVLIISA 548
T ++ A
Sbjct: 304 TISSVLPA 311
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 270/818 (33%), Positives = 428/818 (52%), Gaps = 19/818 (2%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIF--YGLSSPNVVSF 67
+C +S K IH L+ + + LIS Y+ +G ++ A + + S V +
Sbjct: 37 KCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 68 TSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVK 127
SLI G + + LF M S P+ ++F + AC + + G HAL +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 128 MGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFE 187
G + +VFV NAL+ +Y + D K+FDE+ D VSWN++I S + + A E
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSD-ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 188 LFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFY 247
+F M + G D T+ +L C G+ +H A+ + N+ V N L+ Y
Sbjct: 215 MFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMY 274
Query: 248 TKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEK----NSVSYN 303
KCG + + + M V D+++ ++ Y + G + AV +F+KM E+ + V+++
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 304 ALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKF 363
A ++GY + G EALG+ ++L G+ E TL SV++ C + ++IH + +K+
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 364 -------GLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSG 416
G G + + L+DM +C ++ A MF D + WT MI GY++ G
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 417 KPEHAI-LLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSS-DLG 474
A+ LL + + P+ ++ L C +L +GKQIH+YAL+ ++ L
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLF 514
Query: 475 VANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKAS 534
V+N ++ MY KC ++S+A F+ M + + V+W L+ G+ +H G+EAL ++ M +
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 535 IKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLE 594
K D +T ++++ Y ++ ++D + F MKT++ + P EHYA LV +LG G L
Sbjct: 575 FKLDGVTLLVVL--YACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 595 EAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYS 654
A I MP +P VW A L CRI +G+ A+ I + +Y L+SNLY+
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYA 692
Query: 655 SSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILIL 714
++GRW + +R MR KG +K P SW+ +F+V DK+HP K+IY L +
Sbjct: 693 NAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQ 752
Query: 715 ECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGD 774
GYVP+T F LH+V++ +K D LF HS KLA YG+LTTP G +RI KN+ CGD
Sbjct: 753 RIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGD 812
Query: 775 CHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
CH+ Y+S + +I LRD+S FHHF NG CSCK YW
Sbjct: 813 CHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 193/466 (41%), Gaps = 84/466 (18%)
Query: 3 NSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSP 62
N L G SL K +H + + Q+ GN L+ Y K G + +A +F +S
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 63 NVVSFTSLISGLAKLGREEEAIELFFRMRSE----------------------------- 93
+VVS+ ++++G +++GR E+A+ LF +M+ E
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 94 ------GIVPNEHSFVAILTACIRLLELELGFQIHALIVKM-------GCVDSVFVTNAL 140
GI PNE + +++L+ C + L G +IH +K G D V N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 141 MGLYGKFSFCLDYLLKLFDELPHK--DTVSWNTVISSVVNEFEYEKAFELFRDM-KRDNG 197
+ +Y K +D +FD L K D V+W +I + KA EL +M + D
Sbjct: 414 IDMYAKCKK-VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 198 FTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGA-NLSVNNALIGFYTKCGRVKDV 256
+ FTIS L AC L G+ +HA+A+R A L V+N LI Y KCG + D
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA 532
Query: 257 VALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAM 316
+ + M + +T T ++ Y GY + A+ IFD+M
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRI------------------- 573
Query: 317 EALGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEAKLSEQIHGFVMKFGLGSNDCIEA 373
G L TL V+ AC G+I + E + FG+ A
Sbjct: 574 ------------GFKLDGVTLLVVLYACSHSGMIDQGM--EYFNRMKTVFGVSPGPEHYA 619
Query: 374 ALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
L+D+L R GR+ A ++ P + ++W + + GK E
Sbjct: 620 CLVDLLGRAGRLNAALRLIEEMPME-PPPVVWVAFLSCCRIHGKVE 664
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/802 (33%), Positives = 432/802 (53%), Gaps = 44/802 (5%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
+ + + +H ++KL DT N L+S Y LG++ A IF +S + V++ +LI+G
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDS 133
L++ G E+A+ELF RM +G+ P+ ++ +++ AC L G Q+HA K+G +
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASN 423
Query: 134 VFVTNALMGLYGK---FSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFR 190
+ AL+ LY K LDY L E ++ V WN ++ + + +F +FR
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFL----ETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 191 DMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKC 250
M+ + + +T ++L C L G +H+ I+ N V + LI Y K
Sbjct: 480 QMQIEE-IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKL 538
Query: 251 GRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYC 310
G++ D A +I + K+ VS+ ++AGY
Sbjct: 539 GKL-------------------------------DTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 311 KNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDC 370
+ +AL F ++L+ G+ E LT+ V+AC + K +QIH G S+
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 371 IEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQS 430
+ AL+ + +RCG++ ++ F + T+ D+I W +++ G+ +SG E A+ +F +
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQ--TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 431 EATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMS 490
E + + S + + GKQ+H+ KTG+ S+ V N+++SMY KC ++S
Sbjct: 686 EG-IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 491 NAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYR 550
+A K F ++ + + VSWN +I + H G EAL + M ++++P+ +T V ++SA
Sbjct: 745 DAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC- 803
Query: 551 YTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVS 610
+++ LVD F SM + Y + P EHY +V +L G L A+E I MP +P
Sbjct: 804 -SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 611 VWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMR 670
VWR LL +C + N IG+ A H+L +EP+D ATY+L+SNLY+ S +W +L R+ M+
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 922
Query: 671 EKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLH 730
EKG +K P +SWI +N +HSFYV D++HP +I+ + L + GYV D +L+
Sbjct: 923 EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLN 982
Query: 731 EVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREI 790
E++ QK +F HS KLA ++GLL+ PA P+ ++KN+ C DCH+++K+VS V+ REI
Sbjct: 983 ELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREI 1042
Query: 791 FLRDASGFHHFLNGQCSCKDYW 812
+RDA FHHF G CSCKDYW
Sbjct: 1043 IVRDAYRFHHFEGGACSCKDYW 1064
Score = 253 bits (645), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 302/606 (49%), Gaps = 46/606 (7%)
Query: 16 LAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLA 75
+ + IHA ++ L T NPLI Y + G V A ++F GL + S+ ++ISGL+
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 76 KLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVF 135
K E EAI LF M GI+P ++F ++L+AC ++ LE+G Q+H L++K+G +
Sbjct: 265 KNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTY 324
Query: 136 VTNALMGLYGKFSFCLDYLLK---LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
V NAL+ LY F L L+ +F + +D V++NT+I+ + EKA ELF+ M
Sbjct: 325 VCNALVSLY----FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGR 252
D G D T+++L+ AC+ L G+ +HA+ ++G +N + AL+ Y KC
Sbjct: 381 HLD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 253 VKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKN 312
++ A++ F + +N V +N +L Y
Sbjct: 440 -------------------------------IETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 313 GKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIE 372
+ +F ++ E +V ++T S++ C + + +L EQIH ++K N +
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 373 AALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEA 432
+ L+DM + G++ A + R+ D + WT+MI GY + + A+ F Q
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAG--KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 433 TVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNA 492
+ DE+ LT+ + C L + G+QIH+ A +GFSSDL N++V++Y +C + +
Sbjct: 587 -IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 493 IKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYT 552
AF + + D ++WN L++G +EAL V+ M + I + TF + A T
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 553 NLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVW 612
N+ + + KT Y+ E +E +L+S+ G + +AE+ + + +VS W
Sbjct: 706 -ANMKQGKQVHAVITKTGYDSE--TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-W 761
Query: 613 RALLDS 618
A++++
Sbjct: 762 NAIINA 767
Score = 203 bits (516), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 147/549 (26%), Positives = 255/549 (46%), Gaps = 44/549 (8%)
Query: 7 LSVQC---GEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPN 63
L V C G + + +HA KL + + L++ Y K + A F N
Sbjct: 395 LVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVEN 454
Query: 64 VVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHA 123
VV + ++ L + +F +M+ E IVPN++++ +IL CIRL +LELG QIH+
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 124 LIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYE 183
I+K + +V + L+ +Y K LD + KD VSW T+I+ +
Sbjct: 515 QIIKTNFQLNAYVCSVLIDMYAKLG-KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 184 KAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNAL 243
KA FR M D G D ++ ++AC G L EG+ +HA A G ++L NAL
Sbjct: 574 KALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNAL 632
Query: 244 IGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYN 303
+ Y++CG++++ +Y+ F++ +++++N
Sbjct: 633 VTLYSRCGKIEE---------------------SYL----------AFEQTEAGDNIAWN 661
Query: 304 ALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKF 363
AL++G+ ++G EAL +FV++ EG+ FT S V A K +Q+H + K
Sbjct: 662 ALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 364 GLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAIL 423
G S + AL+ M +CG ++DAEK F T + + W ++I Y++ G A+
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE--VSWNAIINAYSKHGFGSEALD 779
Query: 424 LFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMG-KQIHSYALKTGFSSDLGVANSMVSM 482
F Q + V P+ + L VL C +G + G S + G S +V M
Sbjct: 780 SFDQ-MIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDM 838
Query: 483 YFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKP-DAI 540
+ +S A + +MP D + W L++ ++H+ + + +++ ++P D+
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNME--IGEFAAHHLLELEPEDSA 896
Query: 541 TFVLIISAY 549
T+VL+ + Y
Sbjct: 897 TYVLLSNLY 905
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 183/405 (45%), Gaps = 33/405 (8%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
L+ ++ G++ L + IH+ +IK + + + LI Y KLG + A+ I + +V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
VS+T++I+G + +++A+ F +M GI +E ++AC L L+ G QIHA
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
G + NAL+ LY + + L F++ D ++WN ++S E+
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLA-FEQTEAGDNIAWNALVSGFQQSGNNEE 675
Query: 185 AFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALI 244
A +F M R+ G + FT + + A + + +G+ VHA + G + V NALI
Sbjct: 676 ALRVFVRMNRE-GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALI 734
Query: 245 GFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNA 304
Y KCG + D + + ++ II AY + G+ A++ FD+M N +
Sbjct: 735 SMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHV 794
Query: 305 LLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFG 364
L G VL+ + +V+ E+ SE +G
Sbjct: 795 TLVG----------------------VLSACSHIGLVDKGIAYFESMNSE--------YG 824
Query: 365 LGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
L ++DMLTR G ++ A++ P + D+++W +++
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI-KPDALVWRTLL 868
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 174/369 (47%), Gaps = 37/369 (10%)
Query: 183 EKAFELFR-DMKRDNGFTVDYFTISTLLTACTGCF-VLMEGRAVHAHAIRIGLGANLSVN 240
+++F+ R D + G ++ T+ LL C L EGR +H+ +++GL +N ++
Sbjct: 64 DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLS 123
Query: 241 NALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSV 300
L FY G + +G A ++FD+MPE+
Sbjct: 124 EKLFDFYLFKGDL---------------------------YG----AFKVFDEMPERTIF 152
Query: 301 SYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNAC-GLIMEAKLSEQIHGF 359
++N ++ E GLFV+++ E + E T + V+ AC G + + EQIH
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHAR 212
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
++ GL + + L+D+ +R G + A ++F S W +MI G +++
Sbjct: 213 ILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS--WVAMISGLSKNECEA 270
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSM 479
AI LF ++P A +SVL C + E+G+Q+H LK GFSSD V N++
Sbjct: 271 EAIRLFCDMYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 480 VSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDA 539
VS+YF N+ +A F+ M D V++N LI G G++A+ ++ M ++PD+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 540 ITFVLIISA 548
T ++ A
Sbjct: 390 NTLASLVVA 398
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F ++++ + + + K +HA + K + +T N LIS Y K G ++DA K F +S
Sbjct: 695 FGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS 754
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTAC 109
+ N VS+ ++I+ +K G EA++ F +M + PN + V +L+AC
Sbjct: 755 TKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 18/282 (6%)
Query: 336 TLTSVVNACGLIMEAKLSE--QIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFY 393
TL ++ C L L E ++H ++K GL SN C+ L D G + A K+F
Sbjct: 86 TLKWLLEGC-LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFD 144
Query: 394 RWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVC--GTL 451
P W MI A LF + SE V P+E + VL C G++
Sbjct: 145 EMP--ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSE-NVTPNEGTFSGVLEACRGGSV 201
Query: 452 GFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLI 511
F ++ +QIH+ L G V N ++ +Y + + A + F+ + D SW +I
Sbjct: 202 AF-DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 512 AGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISA-YRYTNLNLVDSCRKLFLSMKTI 570
+G + EA+ ++ M I P F ++SA + +L + + L L +
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF- 319
Query: 571 YNIEPTSEHYA--SLVSVLGYWGFLEEAEETINNMPFQPKVS 610
+S+ Y +LVS+ + G L AE +NM + V+
Sbjct: 320 -----SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVT 356
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 279/815 (34%), Positives = 440/815 (53%), Gaps = 74/815 (9%)
Query: 2 FNSLRLSVQCGEVSLAKAIHASLIKLLL---EQDTRFGNPLISAYLKLGHVADAYKIFYG 58
F+SL+ + Q I S K LL + D + N IS+Y++ G +A ++F
Sbjct: 37 FHSLKRATQT-------QIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKR 89
Query: 59 LSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELG 118
+ + VS+ +ISG + G E A +LF M +V S+ ++ +R L
Sbjct: 90 MPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKA 145
Query: 119 FQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVN 178
++ ++ + V N ++ Y + + C+D +FD +P K+ VSWN ++S+ V
Sbjct: 146 RELFEIMPER----DVCSWNTMLSGYAQ-NGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 179 EFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLS 238
+ E+A LF+ R+N V + + LL G FV + + V A +
Sbjct: 201 NSKMEEACMLFKS--RENWALVSW---NCLL----GGFV-KKKKIVEARQFFDSMNVRDV 250
Query: 239 VN-NALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEK 297
V+ N +I Y + G++ + L + PV D+ T T ++ Y++ V+ A E+FDKMPE+
Sbjct: 251 VSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER 310
Query: 298 NSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIH 357
N VS+NA+LAGY + G+ ME ++ V T T+ I
Sbjct: 311 NEVSWNAMLAGYVQ-GERMEMAKELFDVMPCRNVSTWNTM------------------IT 351
Query: 358 GFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGK 417
G+ +CG++++A+ +F + P + D + W +MI GY++SG
Sbjct: 352 GYA--------------------QCGKISEAKNLFDKMP--KRDPVSWAAMIAGYSQSGH 389
Query: 418 PEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVAN 477
A+ LF Q + E + + + +S L C + E+GKQ+H +K G+ + V N
Sbjct: 390 SFEALRLFVQMEREGGRL-NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN 448
Query: 478 SMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKP 537
+++ MY KC ++ A F +M DIVSWN +IAG+ H G+ AL + SM++ +KP
Sbjct: 449 ALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKP 508
Query: 538 DAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAE 597
D T V ++SA +T L VD R+ F +M Y + P S+HYA +V +LG G LE+A
Sbjct: 509 DDATMVAVLSACSHTGL--VDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAH 566
Query: 598 ETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSG 657
+ NMPF+P ++W LL + R+ NT + + A I AMEP++ Y+L+SNLY+SSG
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSG 626
Query: 658 RWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECL 717
RW + +R MR+KG +K P SWI QNK H+F V D+ HP + +I++ LE L L
Sbjct: 627 RWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMK 686
Query: 718 KAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHS 777
KAGYV TS VLH+VEE +K+ + YHS +LA YG++ +G+P+R++KN+ C DCH+
Sbjct: 687 KAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHN 746
Query: 778 FLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
+KY++ +T R I LRD + FHHF +G CSC DYW
Sbjct: 747 AIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 275/822 (33%), Positives = 439/822 (53%), Gaps = 46/822 (5%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGL- 59
F + L+ ++ + L K +HA LI+ +E D+ N LIS Y K G A A +F +
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 60 --SSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELEL 117
+VVS++++++ GRE +AI++F G+VPN++ + A++ AC + +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 118 GFQIHALIVKMGCVDS-VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSV 176
G ++K G +S V V +L+ ++ K + K+FD++ + V+W +I+
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 177 VNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGAN 236
+ +A F DM +GF D FT+S++ +AC L G+ +H+ AIR GL +
Sbjct: 245 MQMGFPREAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD 303
Query: 237 LSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPE 296
V +L+ Y KC G VD ++FD+M +
Sbjct: 304 --VECSLVDMYAKCS----------------------------ADGSVDDCRKVFDRMED 333
Query: 297 KNSVSYNALLAGYCKNGK-AMEALGLFVKLLEEGLV-LTEFTLTSVVNACGLIMEAKLSE 354
+ +S+ AL+ GY KN A EA+ LF +++ +G V FT +S ACG + + ++ +
Sbjct: 334 HSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK 393
Query: 355 QIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYAR 414
Q+ G K GL SN + +++ M + RM DA++ F + + + + + G R
Sbjct: 394 QVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE--SLSEKNLVSYNTFLDGTCR 451
Query: 415 SGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLG 474
+ E A L + +E + S+L +G G+QIHS +K G S +
Sbjct: 452 NLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 475 VANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKAS 534
V N+++SMY KC ++ A + FN M + +++SW +I G H L ++ M +
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 535 IKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLE 594
+KP+ +T+V I+SA +++ LV + F SM + I+P EHYA +V +L G L
Sbjct: 571 VKPNEVTYVAILSAC--SHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLT 628
Query: 595 EAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYS 654
+A E IN MPFQ V VWR L +CR+ NT +GK A+ IL ++P +PA YI +SN+Y+
Sbjct: 629 DAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYA 688
Query: 655 SSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILIL 714
+G+W S +R M+E+ K SWI +K+H FYV D +HP IY L+ LI
Sbjct: 689 CAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLIT 748
Query: 715 ECLKAGYVPDTSFVLHEVEEHQKKD----FLFYHSAKLAATYGLLTTPAGQPVRIVKNIL 770
E + GYVPDT VLH++EE + L+ HS K+A +GL++T +PVR+ KN+
Sbjct: 749 EIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLR 808
Query: 771 TCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
CGDCH+ +KY+S V+ REI LRD + FHHF +G+CSC DYW
Sbjct: 809 VCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 220/472 (46%), Gaps = 53/472 (11%)
Query: 90 MRSEGIVPNEH-SFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKF- 147
M +GI P + +F ++L +CIR + LG +HA +++ + N+L+ LY K
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 148 -SFCLDYLLKLFDELPHKDTVSWNTVISSVVN---EFEYEKAFELFRDMKRDNGFTVDYF 203
S + + + +D VSW+ +++ N E + K F F ++ G + +
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLEL----GLVPNDY 167
Query: 204 TISTLLTACTGCFVLMEGRAVHAHAIRIG-LGANLSVNNALIGFYTKC-GRVKDVVALLE 261
+ ++ AC+ + GR ++ G +++ V +LI + K ++ + +
Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227
Query: 262 RMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGL 321
+M ++++T T +I M+ G+ EA+
Sbjct: 228 KMSELNVVTWTLMITRCMQMGF-------------------------------PREAIRF 256
Query: 322 FVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTR 381
F+ ++ G +FTL+SV +AC + L +Q+H + ++ GL D +E +L+DM +
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVECSLVDMYAK 314
Query: 382 C---GRMADAEKMFYRWPTDRDDSII-WTSMICGYARSGK-PEHAILLFHQSQSEATVVP 436
C G + D K+F R D S++ WT++I GY ++ AI LF + ++ V P
Sbjct: 315 CSADGSVDDCRKVFDRM---EDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 437 DEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAF 496
+ +S CG L +GKQ+ A K G +S+ VANS++SM+ K M +A +AF
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 497 NKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISA 548
+ ++VS+N + G + ++A + S + + + A TF ++S
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSG 483
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust.
Identities = 268/811 (33%), Positives = 432/811 (53%), Gaps = 47/811 (5%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
LR +Q + AKAIH ++K D N L++AY+K G DA +F + N
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNN 115
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
VSF +L G A ++ I L+ R+ EG N H F + L + L + E+ +H+
Sbjct: 116 VSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFC--LDYLLKLFDELPHKDTVSWNTVISSVVNEFEY 182
IVK+G + FV AL+ Y S C +D +F+ + KD V W ++S V +
Sbjct: 172 IVKLGYDSNAFVGAALINAY---SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 183 EKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNA 242
E + +L M R GF + +T T L A G + VH ++ + V
Sbjct: 229 EDSLKLLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 243 LIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSY 302
L+ YT+ G + D A ++F++MP+ + V +
Sbjct: 288 LLQLYTQLGDMSD-------------------------------AFKVFNEMPKNDVVPW 316
Query: 303 NALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMK 362
+ ++A +C+NG EA+ LF+++ E +V EFTL+S++N C + + L EQ+HG V+K
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 363 FGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAI 422
G + + AL+D+ +C +M A K+F + + + W ++I GY G+ A
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE--VSWNTVIVGYENLGEGGKAF 434
Query: 423 LLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSM 482
+F ++ V E+ +S LG C +L ++G Q+H A+KT + + V+NS++ M
Sbjct: 435 SMFREALRNQVSVT-EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 483 YFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITF 542
Y KC ++ A FN+M + D+ SWN LI+G+ H G +AL + M+ KP+ +TF
Sbjct: 494 YAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTF 553
Query: 543 VLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINN 602
+ ++S +N L+D ++ F SM + IEP EHY +V +LG G L++A + I
Sbjct: 554 LGVLSGC--SNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 603 MPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNS 662
+P++P V +WRA+L + + N +R A+ IL + P+D ATY+LVSN+Y+ + +W N
Sbjct: 612 IPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANV 671
Query: 663 ELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYV 722
+R+ M+E G +K P SWI HQ VH F V HP K I LE L ++ +AGYV
Sbjct: 672 ASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYV 731
Query: 723 PDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQP-VRIVKNILTCGDCHSFLKY 781
PD + VL ++++ +K L+ HS +LA YGL+ P+ + + I+KN+ C DCHS +K
Sbjct: 732 PDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKV 791
Query: 782 VSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
+S + +R++ +RD + FHHF G CSC D+W
Sbjct: 792 ISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 140/553 (25%), Positives = 246/553 (44%), Gaps = 43/553 (7%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F + L+L V + + +H+ ++KL + + G LI+AY G V A +F G+
Sbjct: 149 FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGIL 208
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQ 120
++V + ++S + G E++++L MR G +PN ++F L A I L +
Sbjct: 209 CKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 121 IHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEF 180
+H I+K V V L+ LY + D K+F+E+P D V W+ +I+
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSD-AFKVFNEMPKNDVVPWSFMIARFCQNG 327
Query: 181 EYEKAFELFRDMKRDNGFTV-DYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
+A +LF M+ F V + FT+S++L C G +H +++G ++ V
Sbjct: 328 FCNEAVDLFIRMRE--AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
+NALI Y KC E+M D AV++F ++ KN
Sbjct: 386 SNALIDVYAKC----------EKM---------------------DTAVKLFAELSSKNE 414
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
VS+N ++ GY G+ +A +F + L + +TE T +S + AC + L Q+HG
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL 474
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
+K + +L+DM +CG + A+ +F T D W ++I GY+ G
Sbjct: 475 AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMET--IDVASWNALISGYSTHGLGR 532
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKT-GFSSDLGVANS 478
A+ + + P+ + VL C G + G++ ++ G L
Sbjct: 533 QALRIL-DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC 591
Query: 479 MVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKP 537
MV + + + A+K +P ++ W +++ + Q +E A S+ E I P
Sbjct: 592 MVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASM--NQNNEEFARRSAEEILKINP 649
Query: 538 -DAITFVLIISAY 549
D T+VL+ + Y
Sbjct: 650 KDEATYVLVSNMY 662
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/803 (32%), Positives = 426/803 (53%), Gaps = 39/803 (4%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTS 69
+C + + I + K L Q+ F L+S + + G V +A ++F + S V + +
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 70 LISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMG 129
++ G AK+ ++A++ F RMR + + P ++F +L C EL +G +IH L+VK G
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 130 CVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELF 189
+F L +Y K ++ K+FD +P +D VSWNT+++ A E+
Sbjct: 166 FSLDLFAMTGLENMYAKCR-QVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 190 RDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTK 249
+ M +N + TI ++L A + ++ G+ +H +A+R G + ++++ AL+ Y K
Sbjct: 225 KSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 250 CGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGY 309
CG + + A ++FD M E+N VS+N+++ Y
Sbjct: 284 CGSL-------------------------------ETARQLFDGMLERNVVSWNSMIDAY 312
Query: 310 CKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND 369
+N EA+ +F K+L+EG+ T+ ++ ++AC + + + IH ++ GL N
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 372
Query: 370 CIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQ 429
+ +L+ M +C + A MF + + + W +MI G+A++G+P A+ F Q +
Sbjct: 373 SVVNSLISMYCKCKEVDTAASMFGKLQSR--TLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 430 SEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNM 489
S TV PD SV+ L K IH +++ ++ V ++V MY KC +
Sbjct: 431 SR-TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 490 SNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAY 549
A F+ M + +WN +I G+ H G AL ++ M+K +IKP+ +TF+ +ISA
Sbjct: 490 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 550 RYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKV 609
++ L V++ K F MK Y+IE + +HY ++V +LG G L EA + I MP +P V
Sbjct: 550 SHSGL--VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAV 607
Query: 610 SVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDM 669
+V+ A+L +C+I N ++ A+ + + P D ++L++N+Y ++ W VR M
Sbjct: 608 NVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSM 667
Query: 670 REKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVL 729
+G RK P S + +N+VHSF+ +HP K IY+ LE LI +AGYVPDT+ VL
Sbjct: 668 LRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL 727
Query: 730 HEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRRE 789
VE K+ L HS KLA ++GLL T AG + + KN+ C DCH+ KY+S+VT RE
Sbjct: 728 -GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGRE 786
Query: 790 IFLRDASGFHHFLNGQCSCKDYW 812
I +RD FHHF NG CSC DYW
Sbjct: 787 IVVRDMQRFHHFKNGACSCGDYW 809
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 130/450 (28%), Positives = 217/450 (48%), Gaps = 39/450 (8%)
Query: 99 EHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLF 158
EH +L C L EL QI L+ K G F L+ L+ ++ +D ++F
Sbjct: 37 EHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYG-SVDEAARVF 92
Query: 159 DELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVL 218
+ + K V ++T++ + +KA + F M+ D+ V Y + LL C L
Sbjct: 93 EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVY-NFTYLLKVCGDEAEL 151
Query: 219 MEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAY 278
G+ +H ++ G +L L Y KC +V +
Sbjct: 152 RVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNE----------------------- 188
Query: 279 MEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLT 338
A ++FD+MPE++ VS+N ++AGY +NG A AL + + EE L + T+
Sbjct: 189 --------ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIV 240
Query: 339 SVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTD 398
SV+ A + + ++IHG+ M+ G S I AL+DM +CG + A ++F +
Sbjct: 241 SVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLF-DGMLE 299
Query: 399 RDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGK 458
R + + W SMI Y ++ P+ A+L+F + E V P ++++ L C LG E G+
Sbjct: 300 R-NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPTDVSVMGALHACADLGDLERGR 357
Query: 459 QIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHR 518
IH +++ G ++ V NS++SMY KC + A F K+ S +VSWN +I G +
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417
Query: 519 QGDEALAVWSSMEKASIKPDAITFVLIISA 548
+ +AL +S M ++KPD T+V +I+A
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 173/371 (46%), Gaps = 38/371 (10%)
Query: 4 SLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPN 63
+L G++ + IH ++L L+++ N LIS Y K V A +F L S
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 64 VVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHA 123
+VS+ ++I G A+ GR +A+ F +MRS + P+ ++V+++TA L IH
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 124 LIVKMGCVD-SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEY 182
++++ C+D +VFVT AL+ +Y K + L +FD + + +WN +I
Sbjct: 463 VVMR-SCLDKNVFVTTALVDMYAKCGAIMIARL-IFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 183 EKAFELFRDMK----RDNGFT----VDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLG 234
+ A ELF +M+ + NG T + + S L+ A CF +M+ ++I +
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK----ENYSIEL--- 573
Query: 235 ANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIA----YMEFGYVDLAVE- 289
++ A++ + GR+ + + +MPV + + ++ + + + A E
Sbjct: 574 -SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 632
Query: 290 IFDKMPEKNSVSYNALLAGYCKNGKAMEALG-LFVKLLEEGLVLTEFTLTSVVNACGLIM 348
+F+ P+ Y+ LLA + E +G + V +L +GL T C ++
Sbjct: 633 LFELNPDDG--GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTP--------GCSMV- 681
Query: 349 EAKLSEQIHGF 359
++ ++H F
Sbjct: 682 --EIKNEVHSF 690
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 265/815 (32%), Positives = 433/815 (53%), Gaps = 45/815 (5%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F + L++S + + +H IK D G L+ Y+K + D K+F +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQ 120
NVV++T+LISG A+ +E + LF RM++EG PN +F A L G Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 121 IHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISS-VVNE 179
+H ++VK G ++ V+N+L+ LY K + LFD+ K V+WN++IS N
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI-LFDKTEVKSVVTWNSMISGYAANG 274
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
+ E A +F M R N + + ++++ C L +H ++ G + ++
Sbjct: 275 LDLE-ALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
AL+ Y+KC + D + L + E G V N
Sbjct: 333 RTALMVAYSKCTAMLDALRL------------------FKEIGCVG------------NV 362
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
VS+ A+++G+ +N EA+ LF ++ +G+ EFT + ++ A +I + ++H
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS----EVHAQ 418
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
V+K + + ALLD + G++ +A K+F D D + W++M+ GYA++G+ E
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS--GIDDKDIVAWSAMLAGYAQTGETE 476
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCG-TLGFHEMGKQIHSYALKTGFSSDLGVANS 478
AI +F + ++ + P+E +S+L VC T GKQ H +A+K+ S L V+++
Sbjct: 477 AAIKMFGE-LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 479 MVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPD 538
+++MY K N+ +A + F + D+VSWN +I+G+ H Q +AL V+ M+K +K D
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 539 AITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEE 598
+TF+ + +A T+ LV+ K F M I PT EH + +V + G LE+A +
Sbjct: 596 GVTFIGVFAAC--THAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 599 TINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGR 658
I NMP ++WR +L +CR+ T +G+ A+ I+AM+P+D A Y+L+SN+Y+ SG
Sbjct: 654 VIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 659 WHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLK 718
W VR+ M E+ +K P SWI +NK +SF D+SHP + IY LE L
Sbjct: 714 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Query: 719 AGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSF 778
GY PDTS+VL ++++ K+ L HS +LA +GL+ TP G P+ I+KN+ CGDCH
Sbjct: 774 LGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLV 833
Query: 779 LKYVSVVTRREIFLRDASGFHHF-LNGQCSCKDYW 812
+K ++ + REI +RD++ FHHF +G CSC D+W
Sbjct: 834 IKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 262/566 (46%), Gaps = 42/566 (7%)
Query: 51 DAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACI 110
+A+ +F + S+ SL+ G ++ GR +EA LF + G+ + F ++L
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 111 RLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWN 170
L + G Q+H +K G +D V V +L+ Y K S D K+FDE+ ++ V+W
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG-RKVFDEMKERNVVTWT 163
Query: 171 TVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIR 230
T+IS ++ LF M+ + G + FT + L V G VH ++
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQ-NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 231 IGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEI 290
GL + V+N+LI Y KCG V+ L ++ V ++T
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT-------------------- 262
Query: 291 FDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEA 350
+N++++GY NG +EALG+F + + L+E + SV+ C + E
Sbjct: 263 -----------WNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 351 KLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMIC 410
+ +EQ+H V+K+G + I AL+ ++C M DA ++F + + WT+MI
Sbjct: 312 RFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC-VGNVVSWTAMIS 370
Query: 411 GYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFS 470
G+ ++ E A+ LF + + + V P+E + +L + E +H+ +KT +
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTALPVISPSE----VHAQVVKTNYE 425
Query: 471 SDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSM 530
V +++ Y K + A K F+ + DIV+W+ ++AG+ + + A+ ++ +
Sbjct: 426 RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL 485
Query: 531 EKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYW 590
K IKP+ TF I++ TN ++ K F ++ + ++L+++
Sbjct: 486 TKGGIKPNEFTFSSILNVCAATNASMGQG--KQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 591 GFLEEAEETINNMPFQPKVSVWRALL 616
G +E AEE + VS W +++
Sbjct: 544 GNIESAEEVFKRQREKDLVS-WNSMI 568
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 259/788 (32%), Positives = 422/788 (53%), Gaps = 77/788 (9%)
Query: 97 PNEHSFVAILTACIRLLELELGFQ--------IHALIVKMGCVDSVFVTNALMGLYGKFS 148
P S +L C LL+ + +H ++K G + SV++ N LM +Y K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 149 FCL------------------------------DYLLKLFDELPHKDTVSWNTVISSVVN 178
+ L D + FD+LP +D+VSW T+I N
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 179 EFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLS 238
+Y KA + DM ++ G FT++ +L + + G+ VH+ +++GL N+S
Sbjct: 124 IGQYHKAIRVMGDMVKE-GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 239 VNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKN 298
V+N+L+ Y KCG + +RM V DI + +I +M+ G +DLA+ F++M E++
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 299 SVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTE-FTLTSVVNACGLIMEAKLSEQIH 357
V++N++++G+ + G + AL +F K+L + L+ + FTL SV++AC + + + +QIH
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 358 GFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPT-------------------- 397
++ G + + AL+ M +RCG + A ++ + T
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 398 ------------DRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVL 445
DR D + WT+MI GY + G AI LF +S P+ L ++L
Sbjct: 363 MNQAKNIFVSLKDR-DVVAWTAMIVGYEQHGSYGEAINLF-RSMVGGGQRPNSYTLAAML 420
Query: 446 GVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDI 504
V +L GKQIH A+K+G + V+N++++MY K N+++A +AF+ + D
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 505 VSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLF 564
VSW +I H +EAL ++ +M ++PD IT+V + SA T+ LV+ R+ F
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA--CTHAGLVNQGRQYF 538
Query: 565 LSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLN 624
MK + I PT HYA +V + G G L+EA+E I MP +P V W +LL +CR+ N
Sbjct: 539 DMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKN 598
Query: 625 TTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWII 684
+GK A+ +L +EP++ Y ++NLYS+ G+W + +R+ M++ +K SWI
Sbjct: 599 IDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Query: 685 HQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYH 744
++KVH F V D +HP + +IY ++ + E K GYVPDT+ VLH++EE K+ L +H
Sbjct: 659 VKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHH 718
Query: 745 SAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNG 804
S KLA +GL++TP +RI+KN+ C DCH+ +K++S + REI +RD + FHHF +G
Sbjct: 719 SEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDG 778
Query: 805 QCSCKDYW 812
CSC+DYW
Sbjct: 779 FCSCRDYW 786
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 257/541 (47%), Gaps = 43/541 (7%)
Query: 19 AIHASLIKLLLEQDTRFG---NPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLA 75
A+HA KL E R N ++SAY K G + + F L + VS+T++I G
Sbjct: 65 ALHAR--KLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 76 KLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVF 135
+G+ +AI + M EGI P + + +L + +E G ++H+ IVK+G +V
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 136 VTNALMGLY--------GKFSF----------------------CLDYLLKLFDELPHKD 165
V+N+L+ +Y KF F +D + F+++ +D
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 166 TVSWNTVISSVVNEFEYE-KAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAV 224
V+WN++IS N+ Y+ +A ++F M RD+ + D FT++++L+AC L G+ +
Sbjct: 243 IVTWNSMISG-FNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQI 301
Query: 225 HAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMD--IITLTEIIIAYMEFG 282
H+H + G + V NALI Y++CG V+ L+E+ D I T ++ Y++ G
Sbjct: 302 HSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLG 361
Query: 283 YVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVN 342
++ A IF + +++ V++ A++ GY ++G EA+ LF ++ G +TL ++++
Sbjct: 362 DMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLS 421
Query: 343 ACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDS 402
+ +QIHG +K G + + AL+ M + G + A + F +R D+
Sbjct: 422 VASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCER-DT 480
Query: 403 IIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHS 462
+ WTSMI A+ G E A+ LF E + PD I V C G G+Q
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEG-LRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 463 YALKTG-FSSDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQG 520
L MV ++ + + A + KMP D+V+W L++ +H+
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 521 D 521
D
Sbjct: 600 D 600
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 163/333 (48%), Gaps = 15/333 (4%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFG--NPLISAYLKLGHVADAYKIFYGLSSPNVVSF 67
+CG V A+ LI+ +D + L+ Y+KLG + A IF L +VV++
Sbjct: 326 RCGGVETAR----RLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 68 TSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVK 127
T++I G + G EAI LF M G PN ++ A+L+ L L G QIH VK
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 128 MGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELP-HKDTVSWNTVISSVVNEFEYEKAF 186
G + SV V+NAL+ +Y K + + + FD + +DTVSW ++I ++ E+A
Sbjct: 442 SGEIYSVSVSNALITMYAK-AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEAL 500
Query: 187 ELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIG-LGANLSVNNALIG 245
ELF M + G D+ T + +ACT ++ +GR + + LS ++
Sbjct: 501 ELFETMLME-GLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 246 FYTKCGRVKDVVALLERMPVM-DIITLTEIIIAYMEFGYVDL---AVEIFDKMPEKNSVS 301
+ + G +++ +E+MP+ D++T ++ A +DL A E + +NS +
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 619
Query: 302 YNALLAGYCKNGKAMEALGLFVKLLEEGLVLTE 334
Y+AL Y GK EA + K +++G V E
Sbjct: 620 YSALANLYSACGKWEEAAKI-RKSMKDGRVKKE 651
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 195/472 (41%), Gaps = 109/472 (23%)
Query: 8 SVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAY------------------------ 43
+ +C E K +H+ ++KL L + N L++ Y
Sbjct: 158 ATRCMET--GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 44 -------LKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRM-RSEGI 95
+++G + A F ++ ++V++ S+ISG + G + A+++F +M R +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 96 VPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGK--------- 146
P+ + ++L+AC L +L +G QIH+ IV G S V NAL+ +Y +
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 147 --------------FSFCLDYLLKLFD---------ELPHKDTVSWNTVISSVVNEFEYE 183
F+ LD +KL D L +D V+W +I Y
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 184 KAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNAL 243
+A LFR M G + +T++ +L+ + L G+ +H A++ G ++SV+NAL
Sbjct: 396 EAINLFRSMV-GGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 244 IGFYTKCGRVKDVVALLERMPV-MDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSY 302
I Y K G + + + D ++ T +IIA + G+ + A+E+F+ M
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETM-------- 506
Query: 303 NALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEAKLSEQIHGF 359
L EGL T V +AC GL+ + + +
Sbjct: 507 -----------------------LMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 360 VMKF--GLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
V K L C ++D+ R G + +A++ + P + D + W S++
Sbjct: 544 VDKIIPTLSHYAC----MVDLFGRAGLLQEAQEFIEKMPIE-PDVVTWGSLL 590
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 446 bits (1148), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/661 (36%), Positives = 376/661 (56%), Gaps = 13/661 (1%)
Query: 158 FDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFV 217
F L ++W +VI ++ + KA F +M R +G D+ ++L +CT
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEM-RASGRCPDHNVFPSVLKSCTMMMD 120
Query: 218 LMEGRAVHAHAIRIGLGANLSVNNALIGFYTKC---GRVKDVVALLERMPVMDIITLTEI 274
L G +VH +R+G+ +L NAL+ Y K G V + + MP + E
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 275 IIA---YMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
+ A M FG +D +F+ MP K+ VSYN ++AGY ++G +AL + ++ L
Sbjct: 181 VKAETCIMPFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 332 LTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKM 391
FTL+SV+ ++ ++IHG+V++ G+ S+ I ++L+DM + R+ D+E++
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 392 FYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTL 451
F R D I W S++ GY ++G+ A+ LF Q + A V P +A +SV+ C L
Sbjct: 300 FSRLYCR--DGISWNSLVAGYVQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHL 356
Query: 452 GFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLI 511
+GKQ+H Y L+ GF S++ +A+++V MY KC N+ A K F++M D VSW +I
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 512 AGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIY 571
GH LH G EA++++ M++ +KP+ + FV +++A +++ LVD F SM +Y
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC--SHVGLVDEAWGYFNSMTKVY 474
Query: 572 NIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRV 631
+ EHYA++ +LG G LEEA I+ M +P SVW LL SC + N + ++V
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 632 AKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHS 691
A+ I ++ ++ Y+L+ N+Y+S+GRW +R MR+KG RK P+ SWI +NK H
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHG 594
Query: 692 FYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAAT 751
F D+SHP I L+ ++ + K GYV DTS VLH+V+E K++ LF HS +LA
Sbjct: 595 FVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVA 654
Query: 752 YGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDY 811
+G++ T G +R+ KNI C DCH +K++S +T REI +RD S FHHF G CSC DY
Sbjct: 655 FGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714
Query: 812 W 812
W
Sbjct: 715 W 715
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 223/474 (47%), Gaps = 71/474 (14%)
Query: 15 SLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGL 74
S AK +HA I+ T + +IS Y L + +A +F L SP V+++ S+I
Sbjct: 22 SQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCF 80
Query: 75 AKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSV 134
+A+ F MR+ G P+ + F ++L +C +++L G +H IV++G +
Sbjct: 81 TDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDL 140
Query: 135 FVTNALMGLYGKF-----------------------------------SFCLDYLLKLFD 159
+ NALM +Y K F +D + ++F+
Sbjct: 141 YTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFE 200
Query: 160 ELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLM 219
+P KD VS+NT+I+ YE A + R+M + D FT+S++L + ++
Sbjct: 201 VMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTD-LKPDSFTLSSVLPIFSEYVDVI 259
Query: 220 EGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYM 279
+G+ +H + IR G+ +++ + ++L+ Y K R++D + R+ D I+ ++ Y+
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 280 EFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTS 339
+ NG+ EAL LF +++ + +S
Sbjct: 320 Q-------------------------------NGRYNEALRLFRQMVTAKVKPGAVAFSS 348
Query: 340 VVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDR 399
V+ AC + L +Q+HG+V++ G GSN I +AL+DM ++CG + A K+F R +
Sbjct: 349 VIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR--MNV 406
Query: 400 DDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGF 453
D + WT++I G+A G A+ LF + + + V P+++A +VL C +G
Sbjct: 407 LDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG-VKPNQVAFVAVLTACSHVGL 459
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 206/446 (46%), Gaps = 45/446 (10%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKL---------GHVAD------------ 51
++ +++H +++L ++ D GN L++ Y KL G+V D
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 52 ---------------AYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV 96
++F + +VVS+ ++I+G A+ G E+A+ + M + +
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 97 PNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLK 156
P+ + ++L +++ G +IH +++ G V++ ++L+ +Y K + D +
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS-ER 298
Query: 157 LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCF 216
+F L +D +SWN++++ V Y +A LFR M S+++ AC
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLA 357
Query: 217 VLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIII 276
L G+ +H + +R G G+N+ + +AL+ Y+KCG +K + +RM V+D ++ T II+
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417
Query: 277 AYMEFGYVDLAVEIFDKMPEK----NSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVL 332
+ G+ AV +F++M + N V++ A+L G EA G F + + +
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 333 TEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMF 392
E + V L+ A E+ + F+ K + + + LL + + AEK+
Sbjct: 478 QELEHYAAV--ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVA 535
Query: 393 YR-WPTDRDDSIIWTSMICGYARSGK 417
+ + D ++ + M YA +G+
Sbjct: 536 EKIFTVDSENMGAYVLMCNMYASNGR 561
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 164/356 (46%), Gaps = 24/356 (6%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
+V K IH +I+ ++ D G+ L+ Y K + D+ ++F L + +S+ SL++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 73 GLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVD 132
G + GR EA+ LF +M + + P +F +++ AC L L LG Q+H +++ G
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
++F+ +AL+ +Y K + K+FD + D VSW +I +A LF +M
Sbjct: 377 NIFIASALVDMYSKCG-NIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRI-GLGANLSVNNALIGFYTKCG 251
KR G + +LTAC+ ++ E ++ GL L A+ + G
Sbjct: 436 KR-QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 252 RVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEK-------NSVSYNA 304
++++ + +M V ++ +++ V +E+ +K+ EK N +Y
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCS---VHKNLELAEKVAEKIFTVDSENMGAYVL 551
Query: 305 LLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFV 360
+ Y NG+ E L +++ ++GL AC I ++ + HGFV
Sbjct: 552 MCNMYASNGRWKEMAKLRLRMRKKGLRKKP--------ACSWI---EMKNKTHGFV 596
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 258/804 (32%), Positives = 423/804 (52%), Gaps = 46/804 (5%)
Query: 11 CGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSL 70
C + AK +HA L+ Q+ L++ Y LG+VA A F + + +V ++ +
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 71 ISGLAKLGREEEAIELF-FRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMG 129
ISG + G E I F M S G+ P+ +F ++L AC +++ G +IH L +K G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG 180
Query: 130 CVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELF 189
+ V+V +L+ LY ++ + + LFDE+P +D SWN +IS ++A L
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARI-LFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 190 RDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTK 249
++ +D T+ +LL+ACT G +H+++I+ GL + L V+N LI Y +
Sbjct: 240 NGLR-----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 250 CGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGY 309
GR++D ++FD+M ++ +S+N+++ Y
Sbjct: 295 FGRLRD-------------------------------CQKVFDRMYVRDLISWNSIIKAY 323
Query: 310 CKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND 369
N + + A+ LF ++ + TL S+ + + + + + GF ++ G D
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 370 -CIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQS 428
I A++ M + G + D+ + + W + D I W ++I GYA++G AI +++
Sbjct: 384 ITIGNAVVVMYAKLG-LVDSARAVFNWLPN-TDVISWNTIISGYAQNGFASEAIEMYNIM 441
Query: 429 QSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCN 488
+ E + ++ SVL C G G ++H LK G D+ V S+ MY KC
Sbjct: 442 EEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 489 MSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISA 548
+ +A+ F ++P + V WN LIA H H G++A+ ++ M +KPD ITFV ++SA
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 549 YRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPK 608
++ L VD + F M+T Y I P+ +HY +V + G G LE A + I +M QP
Sbjct: 562 CSHSGL--VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 609 VSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVRED 668
S+W ALL +CR+ N +GK ++H+ +EP+ ++L+SN+Y+S+G+W + +R
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Query: 669 MREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFV 728
KG RK P S + NKV FY +++HP +++Y L L + GYVPD FV
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFV 739
Query: 729 LHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRR 788
L +VE+ +K+ L HS +LA + L+ TPA +RI KN+ CGDCHS K++S +T R
Sbjct: 740 LQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITER 799
Query: 789 EIFLRDASGFHHFLNGQCSCKDYW 812
EI +RD++ FHHF NG CSC DYW
Sbjct: 800 EIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 191/409 (46%), Gaps = 39/409 (9%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
L + G+ + IH+ IK LE + N LI Y + G + D K+F + ++
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
+S+ S+I + AI LF MR I P+ + +++ + +L ++ +
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 125 IVKMGC-VDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYE 183
++ G ++ + + NA++ +Y K +D +F+ LP+ D +SWNT+IS
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGL-VDSARAVFNWLPNTDVISWNTIISGYAQNGFAS 432
Query: 184 KAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNAL 243
+A E++ M+ + + T ++L AC+ L +G +H ++ GL ++ V +L
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 244 IGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYN 303
Y KCGR++D A+ +F ++P NSV +N
Sbjct: 493 ADMYGKCGRLED-------------------------------ALSLFYQIPRVNSVPWN 521
Query: 304 ALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEAKLSEQIHGFV 360
L+A + +G +A+ LF ++L+EG+ T ++++AC GL+ E + ++
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM--MQ 579
Query: 361 MKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
+G+ + ++DM R G++ A K F + + + D+ IW +++
Sbjct: 580 TDYGITPSLKHYGCMVDMYGRAGQLETALK-FIKSMSLQPDASIWGALL 627
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 251/781 (32%), Positives = 422/781 (54%), Gaps = 37/781 (4%)
Query: 32 DTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMR 91
D+ G+ L Y G + +A ++F + + + L++ LAK G +I LF +M
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 92 SEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCL 151
S G+ + ++F + + L + G Q+H I+K G + V N+L+ Y K +
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR-V 246
Query: 152 DYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTA 211
D K+FDE+ +D +SWN++I+ V+ EK +F M +G +D TI ++
Sbjct: 247 DSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV-SGIEIDLATIVSVFAG 305
Query: 212 CTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITL 271
C ++ GRAVH+ ++ N L+ Y+KCG +
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDL------------------ 347
Query: 272 TEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
D A +F +M +++ VSY +++AGY + G A EA+ LF ++ EEG+
Sbjct: 348 -------------DSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 332 LTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKM 391
+T+T+V+N C +++H ++ + LG + + AL+DM +CG M +AE +
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 392 FYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTL 451
F D I W ++I GY+++ A+ LF+ E PDE + VL C +L
Sbjct: 455 FSEMRVK--DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL 512
Query: 452 GFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLI 511
+ G++IH Y ++ G+ SD VANS+V MY KC + A F+ + S D+VSW +I
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 512 AGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIY 571
AG+ +H G EA+A+++ M +A I+ D I+FV ++ Y ++ LVD + F M+
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL--YACSHSGLVDEGWRFFNIMRHEC 630
Query: 572 NIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRV 631
IEPT EHYA +V +L G L +A I NMP P ++W ALL CRI + + ++V
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 632 AKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHS 691
A+ + +EP++ Y+L++N+Y+ + +W + +R+ + ++G RK+P SWI + +V+
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750
Query: 692 FYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAAT 751
F D S+P ++I + L + ++ GY P T + L + EE +K++ L HS KLA
Sbjct: 751 FVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810
Query: 752 YGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDY 811
G++++ G+ +R+ KN+ CGDCH K++S +TRREI LRD++ FH F +G CSC+ +
Sbjct: 811 LGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870
Query: 812 W 812
W
Sbjct: 871 W 871
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 202/408 (49%), Gaps = 52/408 (12%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
+SL +A+H+ +K ++ RF N L+ Y K G + A +F +S +VVS+TS+I+G
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDS 133
A+ G EA++LF M EGI P+ ++ A+L C R L+ G ++H I +
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD 431
Query: 134 VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMK 193
+FV+NALM +Y K + L +F E+ KD +SWNT+I +A LF +
Sbjct: 432 IFVSNALMDMYAKCGSMQEAEL-VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 194 RDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRV 253
+ F+ D T++ +L AC +GR +H + +R G ++ V N+L+ Y KCG
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG-- 548
Query: 254 KDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNG 313
+++A+M +FD + K+ VS+ ++AGY +G
Sbjct: 549 -------------------ALLLAHM----------LFDDIASKDLVSWTVMIAGYGMHG 579
Query: 314 KAMEALGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEAKLSEQIHGFVMKFGLGSNDC 370
EA+ LF ++ + G+ E + S++ AC GL+ E G+ F + ++C
Sbjct: 580 FGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE--------GWRF-FNIMRHEC 630
Query: 371 -IE------AALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICG 411
IE A ++DML R G + A + P D+ IW +++CG
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP-PDATIWGALLCG 677
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 237/519 (45%), Gaps = 45/519 (8%)
Query: 2 FNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSS 61
F+SLR SV GE +H ++K + GN L++ YLK V A K+F ++
Sbjct: 205 FSSLR-SVHGGE-----QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 62 PNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQI 121
+V+S+ S+I+G G E+ + +F +M GI + + V++ C + LG +
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 122 HALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFE 181
H++ VK N L+ +Y K LD +F E+ + VS+ ++I+ E
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGD-LDSAKAVFREMSDRSVVSYTSMIAGYAREGL 377
Query: 182 YEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNN 241
+A +LF +M+ + G + D +T++ +L C +L EG+ VH LG ++ V+N
Sbjct: 378 AGEAVKLFEEMEEE-GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN 436
Query: 242 ALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVS 301
AL+ Y KCG +++ + M V DII+ II
Sbjct: 437 ALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII-------------------------- 470
Query: 302 YNALLAGYCKNGKAMEALGLFVKLLEEG-LVLTEFTLTSVVNACGLIMEAKLSEQIHGFV 360
GY KN A EAL LF LLEE E T+ V+ AC + +IHG++
Sbjct: 471 -----GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYI 525
Query: 361 MKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEH 420
M+ G S+ + +L+DM +CG + A +F + D + WT MI GY G +
Sbjct: 526 MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS--KDLVSWTVMIAGYGMHGFGKE 583
Query: 421 AILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYAL-KTGFSSDLGVANSM 479
AI LF+Q + +A + DEI+ S+L C G + G + + + + +
Sbjct: 584 AIALFNQMR-QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Query: 480 VSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLH 517
V M + ++ A + MP D W L+ G +H
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 157/350 (44%), Gaps = 34/350 (9%)
Query: 198 FTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVV 257
+ +D T+ ++L C L +G+ V G + ++ + L YT CG +K+
Sbjct: 90 WDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKE-- 147
Query: 258 ALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAME 317
A +FD++ + ++ +N L+ K+G
Sbjct: 148 -----------------------------ASRVFDEVKIEKALFWNILMNELAKSGDFSG 178
Query: 318 ALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLD 377
++GLF K++ G+ + +T + V + + EQ+HGF++K G G + + +L+
Sbjct: 179 SIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVA 238
Query: 378 MLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPD 437
+ R+ A K+F T+R D I W S+I GY +G E + +F Q + D
Sbjct: 239 FYLKNQRVDSARKVFDEM-TER-DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI-D 295
Query: 438 EIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFN 497
+ SV C +G+ +HS +K FS + N+++ MY KC ++ +A F
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 498 KMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIIS 547
+M +VS+ +IAG+ EA+ ++ ME+ I PD T +++
Sbjct: 356 EMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 412 YARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSS 471
+ SG E+A+ L S D L SVL +C + GK++ ++ GF
Sbjct: 71 FCESGNLENAVKLLCVSGKWDI---DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVI 127
Query: 472 DLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGD--EALAVWSS 529
D + + + MY C ++ A + F+++ + WN L+ + L + GD ++ ++
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILM--NELAKSGDFSGSIGLFKK 185
Query: 530 MEKASIKPDAITFVLIISAY 549
M + ++ D+ TF + ++
Sbjct: 186 MMSSGVEMDSYTFSCVSKSF 205
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/739 (33%), Positives = 403/739 (54%), Gaps = 46/739 (6%)
Query: 78 GREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVT 137
G+ ++ F M + ++ +F+ +L +++ L LG Q+H + +K+G + V+
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 138 NALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNG 197
N+L+ +Y K + +FD + +D +SWN+VI+ + +A LF + R G
Sbjct: 354 NSLINMYCKLRK-FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR-CG 411
Query: 198 FTVDYFTISTLLTACTGCFVLMEG----RAVHAHAIRIGLGANLSVNNALIGFYTKCGRV 253
D +T++++L A + L EG + VH HAI+I ++ V+ ALI Y++ +
Sbjct: 412 LKPDQYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 254 KDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNG 313
K+ L ER FD V++NA++AGY ++
Sbjct: 469 KEAEILFERHN--------------------------FDL------VAWNAMMAGYTQSH 496
Query: 314 KAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEA 373
+ L LF + ++G +FTL +V CG + +Q+H + +K G + + +
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 374 ALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEAT 433
+LDM +CG M+ A+ F P D + WT+MI G +G+ E A +F Q +
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVP--DDVAWTTMISGCIENGEEERAFHVFSQMRLMG- 613
Query: 434 VVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAI 493
V+PDE + ++ L E G+QIH+ ALK ++D V S+V MY KC ++ +A
Sbjct: 614 VLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAY 673
Query: 494 KAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTN 553
F ++ +I +WN ++ G H +G E L ++ M+ IKPD +TF+ ++SA ++
Sbjct: 674 CLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 554 LNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWR 613
L V K SM Y I+P EHY+ L LG G +++AE I +M + S++R
Sbjct: 734 L--VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYR 791
Query: 614 ALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKG 673
LL +CR++ +T GKRVA +L +EP D + Y+L+SN+Y+++ +W +L R M+
Sbjct: 792 TLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHK 851
Query: 674 FRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVE 733
+K P SWI +NK+H F V D+S+ + + IY ++ +I + + GYVP+T F L +VE
Sbjct: 852 VKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVE 911
Query: 734 EHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLR 793
E +K+ L+YHS KLA +GLL+TP P+R++KN+ CGDCH+ +KY++ V REI LR
Sbjct: 912 EEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLR 971
Query: 794 DASGFHHFLNGQCSCKDYW 812
DA+ FH F +G CSC DYW
Sbjct: 972 DANRFHRFKDGICSCGDYW 990
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 154/600 (25%), Positives = 273/600 (45%), Gaps = 66/600 (11%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
+F LR ++ ++ L K HA ++ + N LIS Y K G + A ++F +
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 61 SPNVVSFTSLISGLAK-----LGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLEL 115
++VS+ S+++ A+ + ++A LF +R + + + + +L C+ +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 116 ELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISS 175
H K+G FV AL+ +Y KF + + LF+E+P++D V WN ++ +
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKV-LFEEMPYRDVVLWNLMLKA 220
Query: 176 VVNEFEYEKAFEL---------------FRDMKRDNGFTVDYFTISTL------------ 208
+ E+A +L R + R +G D + +
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEI 280
Query: 209 ---------------LTACTGCFVLMEGRAVHAHAIR--IGLGANLSVNNALIGFYTKCG 251
+A CF M V + + L + V++ +G C
Sbjct: 281 IFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 252 RVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCK 311
+K + L+ + +I Y + A +FD M E++ +S+N+++AG +
Sbjct: 341 ALKLGLDLM-------LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 312 NGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEA-KLSEQIHGFVMKFGLGSNDC 370
NG +EA+ LF++LL GL ++T+TSV+ A + E LS+Q+H +K S+
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 371 IEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFH--QS 428
+ AL+D +R M +AE +F R D + W +M+ GY +S + LF
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFERHNFDL---VAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 429 QSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCN 488
Q E + D+ L +V CG L GKQ+H+YA+K+G+ DL V++ ++ MY KC +
Sbjct: 511 QGERS---DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 489 MSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISA 548
MS A AF+ +P D V+W +I+G + + + + A V+S M + PD T + A
Sbjct: 568 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 627
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 217/454 (47%), Gaps = 38/454 (8%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F L +V+ ++L + +H +KL L+ N LI+ Y KL A +F +S
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLE-LELGF 119
+++S+ S+I+G+A+ G E EA+ LF ++ G+ P++++ ++L A L E L L
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
Q+H +K+ V FV+ AL+ Y + + C+ LF E + D V+WN +++
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILF-ERHNFDLVAWNAMMAGYTQS 495
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
+ K +LF M + G D FT++T+ C F + +G+ VHA+AI+ G +L V
Sbjct: 496 HDGHKTLKLFALMHK-QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
++ ++ Y KCG + + +PV D + T +I
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI------------------------ 590
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
+G +NG+ A +F ++ G++ EFT+ ++ A + + QIH
Sbjct: 591 -------SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHAN 643
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
+K ++ + +L+DM +CG + DA +F R + + W +M+ G A+ G+ +
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKR--IEMMNITAWNAMLVGLAQHGEGK 701
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGF 453
+ LF Q +S + PD++ VL C G
Sbjct: 702 ETLQLFKQMKSLG-IKPDKVTFIGVLSACSHSGL 734
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 131/274 (47%), Gaps = 12/274 (4%)
Query: 11 CG---EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSF 67
CG ++ K +HA IK + D + ++ Y+K G ++ A F + P+ V++
Sbjct: 527 CGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAW 586
Query: 68 TSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVK 127
T++ISG + G EE A +F +MR G++P+E + + A L LE G QIHA +K
Sbjct: 587 TTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK 646
Query: 128 MGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFE 187
+ C + FV +L+ +Y K +D LF + + +WN ++ + E ++ +
Sbjct: 647 LNCTNDPFVGTSLVDMYAKCG-SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQ 705
Query: 188 LFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEG----RAVHAHAIRIGLGANLSVNNAL 243
LF+ MK G D T +L+AC+ ++ E R++H G+ + + L
Sbjct: 706 LFKQMK-SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD---YGIKPEIEHYSCL 761
Query: 244 IGFYTKCGRVKDVVALLERMPVMDIITLTEIIIA 277
+ G VK L+E M + ++ ++A
Sbjct: 762 ADALGRAGLVKQAENLIESMSMEASASMYRTLLA 795
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 256/804 (31%), Positives = 430/804 (53%), Gaps = 46/804 (5%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
+ + ++ ++ + E D GN L+ Y ++G + A ++F + ++VS+ SLIS
Sbjct: 121 DAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLIS 180
Query: 73 GLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVD 132
G + G EEA+E++ +++ IVP+ + ++L A LL ++ G +H +K G
Sbjct: 181 GYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNS 240
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
V V N L+ +Y KF D ++FDE+ +D+VS+NT+I + E++ +F +
Sbjct: 241 VVVVNNGLVAMYLKFRRPTD-ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--L 297
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGR 252
+ + F D T+S++L AC L + ++ + ++ G +V N LI Y KCG
Sbjct: 298 ENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG- 356
Query: 253 VKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKN 312
D+IT A ++F+ M K++VS+N++++GY ++
Sbjct: 357 --------------DMIT----------------ARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 313 GKAMEALGLFVKLL---EEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND 369
G MEA+ LF ++ E+ +T L SV + + K + +H +K G+ +
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR---LADLKFGKGLHSNGIKSGICIDL 443
Query: 370 CIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQ 429
+ AL+DM +CG + D+ K+F T D++ W ++I R G + + Q +
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTG--DTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 430 SEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNM 489
++ VVPD L +C +L +GK+IH L+ G+ S+L + N+++ MY KC +
Sbjct: 502 -KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 490 SNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAY 549
N+ + F +M D+V+W G+I + ++ +G++AL ++ MEK+ I PD++ F+ II Y
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII--Y 618
Query: 550 RYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKV 609
++ LVD F MKT Y I+P EHYA +V +L + +AEE I MP +P
Sbjct: 619 ACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA 678
Query: 610 SVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDM 669
S+W ++L +CR + +RV++ I+ + P DP IL SN Y++ +W L+R+ +
Sbjct: 679 SIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSL 738
Query: 670 REKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVL 729
++K K+P SWI VH F D S P+ + IY LEIL K GY+PD V
Sbjct: 739 KDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVS 798
Query: 730 HEV-EEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRR 788
+ EE +K+ + HS +LA +GLL T G P++++KN+ CGDCH K +S + R
Sbjct: 799 QNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGR 858
Query: 789 EIFLRDASGFHHFLNGQCSCKDYW 812
EI +RDA+ FH F +G CSCKD W
Sbjct: 859 EILVRDANRFHLFKDGTCSCKDRW 882
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/536 (29%), Positives = 274/536 (51%), Gaps = 50/536 (9%)
Query: 18 KAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS-SPNVVSFTSLISGLAK 76
+ IHA +I L L+ F LI Y A + +F +S + NV + S+I +K
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 77 LGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFV 136
G EA+E + ++R + P++++F +++ AC L + E+G ++ I+ MG +FV
Sbjct: 84 NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 137 TNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDN 196
NAL+ +Y + L ++FDE+P +D VSWN++IS + YE+A E++ ++K N
Sbjct: 144 GNALVDMYSRMGL-LTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK--N 200
Query: 197 GFTV-DYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKD 255
+ V D FT+S++L A V+ +G+ +H A++ G+ + + VNN L+ Y K R D
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 256 VVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKA 315
+ + M V D ++ +I Y++ V+ +V +F
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF------------------------ 296
Query: 316 MEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAAL 375
+E L F L T++SV+ ACG + + L++ I+ +++K G + L
Sbjct: 297 LENLDQFKPDL--------LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 376 LDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQ---SQSEA 432
+D+ +CG M A +F + D++ W S+I GY +SG A+ LF + +A
Sbjct: 349 IDVYAKCGDMITARDVFN--SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQA 406
Query: 433 TVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNA 492
D I ++ V L + GK +HS +K+G DL V+N+++ MY KC + ++
Sbjct: 407 ----DHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 493 IKAFNKMPSHDIVSWNGLIAGHLLHRQGDEA--LAVWSSMEKASIKPDAITFVLII 546
+K F+ M + D V+WN +I+ + R GD A L V + M K+ + PD TF++ +
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACV--RFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 211/430 (49%), Gaps = 40/430 (9%)
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
+IHAL++ +G S F + L+ Y F L P K+ WN++I +
Sbjct: 25 RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKN 84
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
+ +A E + + R++ + D +T +++ AC G F G V+ + +G ++L V
Sbjct: 85 GLFPEALEFYGKL-RESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFV 143
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
NAL+ Y++ G + + + MPV D+++ +I Y GY + A+EI+ ++ KNS
Sbjct: 144 GNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL--KNS 201
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
+V FT++SV+ A G ++ K + +HGF
Sbjct: 202 -----------------------------WIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
+K G+ S + L+ M + R DA ++F D DS+ + +MICGY + E
Sbjct: 233 ALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDE--MDVRDSVSYNTMICGYLKLEMVE 290
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSM 479
++ +F ++ + PD + ++SVL CG L + K I++Y LK GF + V N +
Sbjct: 291 ESVRMFLENLDQFK--PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 480 VSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGD--EALAVWSSMEKASIKP 537
+ +Y KC +M A FN M D VSWN +I+G++ + GD EA+ ++ M +
Sbjct: 349 IDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI--QSGDLMEAMKLFKMMMIMEEQA 406
Query: 538 DAITFVLIIS 547
D IT++++IS
Sbjct: 407 DHITYLMLIS 416
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 50/421 (11%)
Query: 11 CG---EVSLAKAIHASLIK--LLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVV 65
CG ++SLAK I+ ++K +LE R N LI Y K G + A +F + + V
Sbjct: 317 CGHLRDLSLAKYIYNYMLKAGFVLESTVR--NILIDVYAKCGDMITARDVFNSMECKDTV 374
Query: 66 SFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALI 125
S+ S+ISG + G EA++LF M + +++ +++ RL +L+ G +H+
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 126 VKMG-CVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
+K G C+D + V+NAL+ +Y K D LK+F + DTV+WNTVIS+ V ++
Sbjct: 435 IKSGICID-LSVSNALIDMYAKCGEVGDS-LKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 185 AFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALI 244
++ M++ D T L C G+ +H +R G + L + NALI
Sbjct: 493 GLQVTTQMRKSE-VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALI 551
Query: 245 GFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEK----NSV 300
Y+KCG +++ + ERM D++T T +I AY +G + A+E F M + +SV
Sbjct: 552 EMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSV 611
Query: 301 SYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFV 360
+ A++ +G E L F K+ K +I +
Sbjct: 612 VFIAIIYACSHSGLVDEGLACFEKM-------------------------KTHYKIDPMI 646
Query: 361 MKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEH 420
+ A ++D+L+R +++ AE+ P + D+ IW S++ SG E
Sbjct: 647 EHY---------ACVVDLLSRSQKISKAEEFIQAMPI-KPDASIWASVLRACRTSGDMET 696
Query: 421 A 421
A
Sbjct: 697 A 697
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 104/196 (53%), Gaps = 2/196 (1%)
Query: 354 EQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYA 413
+IH V+ GL S+D L+D + A + +F R ++ +W S+I ++
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKN-VYLWNSIIRAFS 82
Query: 414 RSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDL 473
++G A L F+ E+ V PD+ SV+ C L EMG ++ L GF SDL
Sbjct: 83 KNGLFPEA-LEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDL 141
Query: 474 GVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKA 533
V N++V MY + ++ A + F++MP D+VSWN LI+G+ H +EAL ++ ++ +
Sbjct: 142 FVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS 201
Query: 534 SIKPDAITFVLIISAY 549
I PD+ T ++ A+
Sbjct: 202 WIVPDSFTVSSVLPAF 217
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%), Gaps = 2/219 (0%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
+ +S + ++ K +H++ IK + D N LI Y K G V D+ KIF + + +
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDT 474
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
V++ ++IS + G +++ +MR +VP+ +F+ L C L LG +IH
Sbjct: 475 VTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCC 534
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
+++ G + + NAL+ +Y K CL+ ++F+ + +D V+W +I + E EK
Sbjct: 535 LLRFGYESELQIGNALIEMYSKCG-CLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 185 AFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRA 223
A E F DM++ +G D ++ AC+ ++ EG A
Sbjct: 594 ALETFADMEK-SGIVPDSVVFIAIIYACSHSGLVDEGLA 631
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F +L + L K IH L++ E + + GN LI Y K G + ++ ++F +S
Sbjct: 512 FLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS 571
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTAC 109
+VV++T +I G E+A+E F M GIVP+ F+AI+ AC
Sbjct: 572 RRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/784 (32%), Positives = 406/784 (51%), Gaps = 81/784 (10%)
Query: 102 FVAILTACI--RLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFD 159
+ A L C+ R L+L +H I+ G + N L+ +Y K S L+Y +LFD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSE-LNYARQLFD 73
Query: 160 ELPH---------------------------------KDTVSWNTVISSVVNEFEYEKAF 186
E+ +DTV +N +I+ + + A
Sbjct: 74 EISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAI 133
Query: 187 ELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAV--HAHAIRIGLGANLSVNNALI 244
LF MK + GF D FT +++L A E + V HA A++ G G SV+NAL+
Sbjct: 134 NLFCKMKHE-GFKPDNFTFASVL-AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALV 191
Query: 245 GFYTKCGRVKDVV----ALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS- 299
Y+KC ++ + + + D + T ++ Y++ GY DL E+ + M +
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKL 251
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
V+YNA+++GY G EAL + +++ G+ L EFT SV+ AC +L +Q+H +
Sbjct: 252 VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAY 311
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
V++ S + +L+ + +CG+ +A +F + P D + W +++ GY SG
Sbjct: 312 VLRREDFSFH-FDNSLVSLYYKCGKFDEARAIFEKMPAK--DLVSWNALLSGYVSSGHIG 368
Query: 420 HAILLFHQSQSEATVV------------------------------PDEIALTSVLGVCG 449
A L+F + + + + P + A + + C
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 450 TLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNG 509
LG + G+Q H+ LK GF S L N++++MY KC + A + F MP D VSWN
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 510 LIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKT 569
LIA H G EA+ V+ M K I+PD IT + +++A ++ LVD RK F SM+T
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC--SHAGLVDQGRKYFDSMET 546
Query: 570 IYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGK 629
+Y I P ++HYA L+ +L G +AE I ++PF+P +W ALL CR+ N +G
Sbjct: 547 VYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGI 606
Query: 630 RVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKV 689
A + + P+ TY+L+SN+++++G+W VR+ MR++G +K + SWI + +V
Sbjct: 607 IAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQV 666
Query: 690 HSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVE-EHQKKDFLFYHSAKL 748
H+F V D SHP + +Y L+ L E + GYVPDTSFVLH+VE + K+D L HS K+
Sbjct: 667 HTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKI 726
Query: 749 AATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSC 808
A +GL+ P G +RI KN+ TCGDCH+F +++S V +R+I LRD FHHF NG+CSC
Sbjct: 727 AVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSC 786
Query: 809 KDYW 812
++W
Sbjct: 787 GNFW 790
Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 142/585 (24%), Positives = 258/585 (44%), Gaps = 78/585 (13%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
L L ++ + LA+A+H ++I + N LI Y K + A ++F +S P+
Sbjct: 21 LCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDK 80
Query: 65 VSFTSLISGLAKLG----------------REE-----------------EAIELFFRMR 91
++ T+++SG G R+ AI LF +M+
Sbjct: 81 IARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 92 SEGIVPNEHSFVAILTACIRLLELELG-FQIHALIVKMGCVDSVFVTNALMGLYGKFSFC 150
EG P+ +F ++L + + E Q HA +K G V+NAL+ +Y K +
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 151 LDYL---LKLFDELPHKDTVSW--------------------------------NTVISS 175
L K+FDE+ KD SW N +IS
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 176 VVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGA 235
VN Y++A E+ R M +G +D FT +++ AC +L G+ VHA+ +R
Sbjct: 261 YVNRGFYQEALEMVRRMV-SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DF 318
Query: 236 NLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMP 295
+ +N+L+ Y KCG+ + A+ E+MP D+++ ++ Y+ G++ A IF +M
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 296 EKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQ 355
EKN +S+ +++G +NG E L LF + EG ++ + + +C ++ +Q
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 356 IHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARS 415
H ++K G S+ AL+ M +CG + +A ++F P DS+ W ++I +
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC--LDSVSWNALIAALGQH 496
Query: 416 GKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGV 475
G A+ ++ + + + PD I L +VL C G + G++ +++T + G
Sbjct: 497 GHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSHAGLVDQGRKYFD-SMETVYRIPPGA 554
Query: 476 AN--SMVSMYFKCCNMSNAIKAFNKMPSHDIVS-WNGLIAGHLLH 517
+ ++ + + S+A +P W L++G +H
Sbjct: 555 DHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F +++ G + HA L+K+ + GN LI+ Y K G V +A ++F +
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTAC 109
+ VS+ +LI+ L + G EA++++ M +GI P+ + + +LTAC
Sbjct: 480 CLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTAC 528
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 243/723 (33%), Positives = 405/723 (56%), Gaps = 25/723 (3%)
Query: 100 HSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFC--------L 151
H +++L C L L + IHA ++K+G ++ + + L+ FC L
Sbjct: 34 HPSLSLLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLI------EFCILSPHFEGL 84
Query: 152 DYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTA 211
Y + +F + + + WNT+ + A +L+ M G + +T +L +
Sbjct: 85 PYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI-SLGLLPNSYTFPFVLKS 143
Query: 212 CTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITL 271
C EG+ +H H +++G +L V+ +LI Y + GR++D + ++ P D+++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 272 TEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
T +I Y GY++ A ++FD++P K+ VS+NA+++GY + G EAL LF +++ +
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 332 LTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKM 391
E T+ +VV+AC +L Q+H ++ G GSN I AL+D+ ++CG + A +
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 392 FYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTL 451
F R P D I W ++I GY + A+LLF Q + P+++ + S+L C L
Sbjct: 324 FERLPYK--DVISWNTLIGGYTHMNLYKEALLLF-QEMLRSGETPNDVTMLSILPACAHL 380
Query: 452 GFHEMGKQIHSYALK--TGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNG 509
G ++G+ IH Y K G ++ + S++ MY KC ++ A + FN + + SWN
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 510 LIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKT 569
+I G +H + D + ++S M K I+PD ITFV ++SA ++ + +D R +F +M
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM--LDLGRHIFRTMTQ 498
Query: 570 IYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGK 629
Y + P EHY ++ +LG+ G +EAEE IN M +P +W +LL +C++ N +G+
Sbjct: 499 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGE 558
Query: 630 RVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKV 689
A++++ +EP++P +Y+L+SN+Y+S+GRW+ R + +KG +K P S I + V
Sbjct: 559 SFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVV 618
Query: 690 HSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLA 749
H F + DK HPR ++IY LE + + KAG+VPDTS VL E+EE K+ L +HS KLA
Sbjct: 619 HEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLA 678
Query: 750 ATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCK 809
+GL++T G + IVKN+ C +CH K +S + +REI RD + FHHF +G CSC
Sbjct: 679 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCN 738
Query: 810 DYW 812
DYW
Sbjct: 739 DYW 741
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/498 (26%), Positives = 225/498 (45%), Gaps = 82/498 (16%)
Query: 4 SLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGH---VADAYKIFYGLS 60
SL L C + + IHA +IK+ L + LI + H + A +F +
Sbjct: 36 SLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQ 120
PN++ + ++ G A A++L+ M S G++PN ++F +L +C + + G Q
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 121 IHALIVKMGCVDSVFVTNALMGLY---GKFSFC--------------------------- 150
IH ++K+GC ++V +L+ +Y G+
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 151 LDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLT 210
++ KLFDE+P KD VSWN +IS Y++A ELF+DM + N D T+ T+++
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDESTMVTVVS 274
Query: 211 ACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIIT 270
AC + GR VH G G+NL + NALI Y+KCG ++ L ER+P D+I
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI- 333
Query: 271 LTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGL 330
S+N L+ GY EAL LF ++L G
Sbjct: 334 ------------------------------SWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 331 VLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKF--GLGSNDCIEAALLDMLTRCGRMADA 388
+ T+ S++ AC + + IH ++ K G+ + + +L+DM +CG + A
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 389 EKMFYRWPTDRDDSII------WTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALT 442
++F +SI+ W +MI G+A G+ + + LF + + + + PD+I
Sbjct: 424 HQVF--------NSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFV 474
Query: 443 SVLGVCGTLGFHEMGKQI 460
+L C G ++G+ I
Sbjct: 475 GLLSACSHSGMLDLGRHI 492
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/806 (30%), Positives = 431/806 (53%), Gaps = 47/806 (5%)
Query: 12 GEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLI 71
G+VS A+ ++ + ++T N +IS ++K G V+ A +F + VV++T L+
Sbjct: 62 GQVSAARKVYDEMP----HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 72 SGLAKLGREEEAIELFFRM--RSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMG 129
A+ +EA +LF +M S +P+ +F +L C + Q+HA VK+G
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 177
Query: 130 CVDSVFVT--NALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFE 187
+ F+T N L+ Y + LD LF+E+P KD+V++NT+I+ + Y ++
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRR-LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIH 236
Query: 188 LFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFY 247
LF M R +G FT S +L A G G+ +HA ++ G + SV N ++ FY
Sbjct: 237 LFLKM-RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 248 TKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLA 307
+K RV L RM +FD+MPE + VSYN +++
Sbjct: 296 SKHDRV-----LETRM--------------------------LFDEMPELDFVSYNVVIS 324
Query: 308 GYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGS 367
Y + + +L F ++ G F ++++ + ++ Q+H + S
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 368 NDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQ 427
+ +L+DM +C +AE +F P + ++ WT++I GY + G + LF +
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLP--QRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 428 SQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCC 487
+ + + D+ +VL + +GKQ+H++ +++G ++ + +V MY KC
Sbjct: 443 MRG-SNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCG 501
Query: 488 NMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIIS 547
++ +A++ F +MP + VSWN LI+ H + G+ A+ ++ M ++ ++PD+++ + +++
Sbjct: 502 SIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLT 561
Query: 548 AYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQP 607
A ++ V+ + F +M IY I P +HYA ++ +LG G EAE+ ++ MPF+P
Sbjct: 562 AC--SHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 608 KVSVWRALLDSCRIRLNTTIGKRVAKHILAMEP-QDPATYILVSNLYSSSGRWHNSELVR 666
+W ++L++CRI N ++ +R A+ + +ME +D A Y+ +SN+Y+++G W V+
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 667 EDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTS 726
+ MRE+G +K P+ SW+ +K+H F D++HP +I + L E + GY PDTS
Sbjct: 680 KAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTS 739
Query: 727 FVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVT 786
V+ +V+E K + L YHS +LA + L++TP G P+ ++KN+ C DCH+ +K +S +
Sbjct: 740 SVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIV 799
Query: 787 RREIFLRDASGFHHFLNGQCSCKDYW 812
+REI +RD S FHHF G CSC DYW
Sbjct: 800 KREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 160 bits (404), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 193/413 (46%), Gaps = 41/413 (9%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F L+ V + +L + +HA + +D GN ++ Y K V + +F +
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQ 120
+ VS+ +IS ++ + E ++ F M+ G F +L+ L L++G Q
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 121 IHALIVKMGCVDSVF-VTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
+H + + DS+ V N+L+ +Y K + L +F LP + TVSW +IS V +
Sbjct: 373 LHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAEL-IFKSLPQRTTVSWTALISGYVQK 430
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
+ +LF M+ N D T +T+L A L+ G+ +HA IR G N+
Sbjct: 431 GLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
+ L+ Y KCG +KD AV++F++MP++N+
Sbjct: 490 GSGLVDMYAKCGSIKD-------------------------------AVQVFEEMPDRNA 518
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNA---CGLIMEAKLSEQI 356
VS+NAL++ + NG A+G F K++E GL ++ V+ A CG + + +E
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQG--TEYF 576
Query: 357 HGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
+G+ A +LD+L R GR A+AEK+ P + D+ I+W+S++
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDE-IMWSSVL 628
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 185/409 (45%), Gaps = 21/409 (5%)
Query: 217 VLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIII 276
++ R V A I+ G + +N ++ + G+V + + MP + ++ +I
Sbjct: 28 TFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMIS 87
Query: 277 AYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEG--LVLTE 334
+++ G V A ++FD MP++ V++ L+ Y +N EA LF ++ +
Sbjct: 88 GHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDH 147
Query: 335 FTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND--CIEAALLDMLTRCGRMADAEKMF 392
T T+++ C + Q+H F +K G +N + LL R+ A +F
Sbjct: 148 VTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLF 207
Query: 393 YRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLG 452
P DS+ + ++I GY + G +I LF + + ++ P + + VL +G
Sbjct: 208 EEIP--EKDSVTFNTLITGYEKDGLYTESIHLFLKMR-QSGHQPSDFTFSGVLK--AVVG 262
Query: 453 FHE--MGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGL 510
H+ +G+Q+H+ ++ TGFS D V N ++ Y K + F++MP D VS+N +
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 511 IAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIIS-AYRYTNLNLVDS--CRKLFLSM 567
I+ + Q + +L + M+ F ++S A ++L + C+ L +
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 568 KTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALL 616
+I ++ SLV + EEAE ++P + VS W AL+
Sbjct: 383 DSILHVG------NSLVDMYAKCEMFEEAELIFKSLPQRTTVS-WTALI 424
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 260/838 (31%), Positives = 411/838 (49%), Gaps = 71/838 (8%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLG---HVADAYKIFYGLSS-PNVV 65
C + K H SL K L+ D L++ +LG ++ A ++F S
Sbjct: 41 NCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCF 100
Query: 66 SFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALI 125
+ SLI G A G EAI LF RM + GI P++++F L+AC + G QIH LI
Sbjct: 101 MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 126 VKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKA 185
VKMG +FV N+L+ Y + LD K+FDE+ ++ VSW ++I + A
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGE-LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 186 FELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIG 245
+LF M RD T + T+ +++AC L G V+A G+ N + +AL+
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 246 FYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNAL 305
Y KC +D+A +FD+ N NA+
Sbjct: 280 MYMKCN-------------------------------AIDVAKRLFDEYGASNLDLCNAM 308
Query: 306 LAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGL 365
+ Y + G EALG+F +++ G+ ++ S +++C + + HG+V++ G
Sbjct: 309 ASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGF 368
Query: 366 GSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKP------- 418
S D I AL+DM +C R A ++F R + W S++ GY +G+
Sbjct: 369 ESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETF 426
Query: 419 ------------------------EHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFH 454
E AI +F QS+ V D + + S+ CG LG
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 455 EMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGH 514
++ K I+ Y K G D+ + ++V M+ +C + +A+ FN + + D+ +W I
Sbjct: 487 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 515 LLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIE 574
+ + A+ ++ M + +KPD + FV ++A + L V +++F SM ++ +
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL--VQQGKEIFYSMLKLHGVS 604
Query: 575 PTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKH 634
P HY +V +LG G LEEA + I +MP +P +W +LL +CR++ N + A+
Sbjct: 605 PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEK 664
Query: 635 ILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYV 694
I + P+ +Y+L+SN+Y+S+GRW++ VR M+EKG RK P S I + K H F
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTS 724
Query: 695 RDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGL 754
D+SHP +I + L+ + G+VPD S VL +V+E +K L HS KLA YGL
Sbjct: 725 GDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGL 784
Query: 755 LTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
+++ G +RIVKN+ C DCHSF K+ S V REI LRD + FH+ G+CSC D+W
Sbjct: 785 ISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/811 (31%), Positives = 420/811 (51%), Gaps = 42/811 (5%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSP-N 63
L+ + ++ +H+ L+KL N L+S Y K ++ A ++F G +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 64 VVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHA 123
V + S++S + G+ E +ELF M G PN ++ V+ LTAC +LG +IHA
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 124 LIVKMGCVDS-VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEY 182
++K S ++V NAL+ +Y + + ++ ++ + D V+WN++I V Y
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRCGK-MPQAERILRQMNNADVVTWNSLIKGYVQNLMY 367
Query: 183 EKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNA 242
++A E F DM G D ++++++ A L+ G +HA+ I+ G +NL V N
Sbjct: 368 KEALEFFSDMIA-AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 243 LIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSY 302
LI Y+KC + YM ++ +M +K+ +S+
Sbjct: 427 LIDMYSKCN-----------------------LTCYMGRAFL--------RMHDKDLISW 455
Query: 303 NALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMK 362
++AGY +N +EAL LF + ++ + + E L S++ A ++ + ++IH +++
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 363 FGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAI 422
GL + I+ L+D+ +C M A ++F D + WTSMI A +G A+
Sbjct: 516 KGL-LDTVIQNELVDVYGKCRNMGYATRVFE--SIKGKDVVSWTSMISSSALNGNESEAV 572
Query: 423 LLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSM 482
LF + E + D +AL +L +L G++IH Y L+ GF + +A ++V M
Sbjct: 573 ELFRR-MVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDM 631
Query: 483 YFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITF 542
Y C ++ +A F+++ ++ + +I + +H G A+ ++ M ++ PD I+F
Sbjct: 632 YACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISF 691
Query: 543 VLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINN 602
+ ++ Y ++ L+D R M+ Y +EP EHY LV +LG + EA E +
Sbjct: 692 LALL--YACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 603 MPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNS 662
M +P VW ALL +CR IG+ A+ +L +EP++P +LVSN+++ GRW++
Sbjct: 750 MKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 809
Query: 663 ELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLK-AGY 721
E VR M+ G KHP SWI KVH F RDKSHP K+IY L + + + GY
Sbjct: 810 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGY 869
Query: 722 VPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKY 781
V DT FVLH V+E +K L HS ++A YGLL TP +RI KN+ C DCH+F K
Sbjct: 870 VADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKL 929
Query: 782 VSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
VS + RR+I +RDA+ FHHF +G CSC D W
Sbjct: 930 VSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 216 bits (549), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 256/541 (47%), Gaps = 43/541 (7%)
Query: 11 CGE---VSLAKAIHASLIKLLLEQDTRF-GNPLISAYLKLGHVADAYKIFYGLSSPNVVS 66
CG+ VS + +H+ + K + F L+ Y K G + DA K+F + +
Sbjct: 90 CGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFA 149
Query: 67 FTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIV 126
+ ++I G A+ L++ MR EG+ SF A+L AC +L ++ G ++H+L+V
Sbjct: 150 WNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV 209
Query: 127 KMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHK-DTVSWNTVISSVVNEFEYEKA 185
K+G + F+ NAL+ +Y K L +LFD K D V WN+++SS + +
Sbjct: 210 KLGYHSTGFIVNALVSMYAKNDD-LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLET 268
Query: 186 FELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGL-GANLSVNNALI 244
ELFR+M G + +TI + LTAC G G+ +HA ++ + L V NALI
Sbjct: 269 LELFREMHM-TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALI 327
Query: 245 GFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNA 304
YT+CG++ +L +M D++T +N+
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVVT-------------------------------WNS 356
Query: 305 LLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFG 364
L+ GY +N EAL F ++ G E ++TS++ A G + ++H +V+K G
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 365 LGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILL 424
SN + L+DM ++C + F R D I WT++I GYA++ A+ L
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLR--MHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 425 FHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYF 484
F + + DE+ L S+L L + K+IH + L+ G D + N +V +Y
Sbjct: 475 FRDVAKKRMEI-DEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYG 532
Query: 485 KCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVL 544
KC NM A + F + D+VSW +I+ L+ EA+ ++ M + + D++ +
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592
Query: 545 I 545
I
Sbjct: 593 I 593
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 155/284 (54%), Gaps = 4/284 (1%)
Query: 273 EIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVL 332
+++ Y + G +D A ++FD+MP++ + ++N ++ Y NG+ AL L+ + EG+ L
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 333 TEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMF 392
+ +++ AC + + + ++H ++K G S I AL+ M + ++ A ++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 393 YRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLG 452
+ ++ D+++W S++ Y+ SGK + LF + P+ + S L C
Sbjct: 241 DGF-QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFS 298
Query: 453 FHEMGKQIHSYALKTG-FSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLI 511
+ ++GK+IH+ LK+ SS+L V N++++MY +C M A + +M + D+V+WN LI
Sbjct: 299 YAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358
Query: 512 AGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAY-RYTNL 554
G++ + EAL +S M A K D ++ II+A R +NL
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNL 402
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 13/223 (5%)
Query: 440 ALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLG-VANSMVSMYFKCCNMSNAIKAFNK 498
A VL +CG G+Q+HS KT S +L +A +V MY KC ++ +A K F++
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 499 MPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVD 558
MP +WN +I ++ + + ALA++ +M + +F ++ A L +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA--CAKLRDIR 199
Query: 559 SCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDS 618
S +L S+ T +LVS+ L A + + +W ++L S
Sbjct: 200 SGSELH-SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 619 CRIRLNTTIGKRVAK----HILAMEPQDPATYILVSNLYSSSG 657
+T GK + + M P +Y +VS L + G
Sbjct: 259 -----YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDG 296
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 421 bits (1083), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/730 (31%), Positives = 394/730 (53%), Gaps = 42/730 (5%)
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
Q HA I+K G + +++ L+ Y ++ C + + +P S++++I ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYN-CFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
+ ++ +F M +G D + L C G+ +H + GL + V
Sbjct: 95 KLFTQSIGVFSRM-FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMP---- 295
++ Y +CGR+ D + +RM D++T + ++ AY G ++ V I +M
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 296 EKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQ 355
E N VS+N +L+G+ ++G EA+ +F K+ G + T++SV+ + G +
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 356 IHGFVMKFGLGSNDCIEAALLDM-------------------------------LTRCGR 384
IHG+V+K GL + C+ +A++DM L+R G
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 385 MADAEKMF--YRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALT 442
+ A +MF ++ T + + WTS+I G A++GK A+ LF + Q A V P+ + +
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV-AGVKPNHVTIP 392
Query: 443 SVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSH 502
S+L CG + G+ H +A++ ++ V ++++ MY KC ++ + FN MP+
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 503 DIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRK 562
++V WN L+ G +H + E ++++ S+ + +KPD I+F ++SA + L D K
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC--GQVGLTDEGWK 510
Query: 563 LFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIR 622
F M Y I+P EHY+ +V++LG G L+EA + I MPF+P VW ALL+SCR++
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 623 LNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSW 682
N + + A+ + +EP++P TY+L+SN+Y++ G W + +R M G +K+P SW
Sbjct: 571 NNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSW 630
Query: 683 IIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLF 742
I +N+V++ DKSHP+ I ++ + E K+G+ P+ F LH+VEE +++ L+
Sbjct: 631 IQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLW 690
Query: 743 YHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFL 802
HS KLA +GLL TP G P++++KN+ CGDCH+ +K++S REIF+RD + FHHF
Sbjct: 691 GHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFK 750
Query: 803 NGQCSCKDYW 812
+G CSC D+W
Sbjct: 751 DGICSCGDFW 760
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 155/590 (26%), Positives = 266/590 (45%), Gaps = 50/590 (8%)
Query: 21 HASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGRE 80
HA ++K + D LI++Y DA + + P + SF+SLI L K
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 81 EEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNAL 140
++I +F RM S G++P+ H + C L ++G QIH + G FV ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 141 MGLYGKFSFCLDYLLKLFDELPHKDT---------------------------------- 166
+Y + D K+FD + KD
Sbjct: 158 FHMYMRCGRMGD-ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 167 -VSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVH 225
VSWN ++S +++A +F+ + GF D T+S++L + +L GR +H
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHH-LGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 226 AHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVD 285
+ I+ GL + V +A+I Y K G V +++L + +M+ I G VD
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 286 LAVEIFDKMPEK----NSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVV 341
A+E+F+ E+ N VS+ +++AG +NGK +EAL LF ++ G+ T+ S++
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 342 NACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDD 401
ACG I HGF ++ L N + +AL+DM +CGR+ ++ +F PT +
Sbjct: 396 PACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT--KN 453
Query: 402 SIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMG-KQI 460
+ W S++ G++ GK + + +F +S + PD I+ TS+L CG +G + G K
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIF-ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 461 HSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQ 519
+ + G L + MV++ + + A +MP D W L+ L
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 520 GDEALAVWSSMEKASIKPDAI-TFVLIISAYRYTNL-NLVDSCRKLFLSM 567
D LA ++ + ++P+ T+VL+ + Y + VDS R S+
Sbjct: 573 VD--LAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESL 620
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 200/442 (45%), Gaps = 80/442 (18%)
Query: 9 VQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSS----PNV 64
++CG + A+ + + ++D + L+ AY + G + + +I + S N+
Sbjct: 162 MRCGRMGDARKV----FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
VS+ ++SG + G +EA+ +F ++ G P++ + ++L + L +G IH
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFC------------------------------LDYL 154
++K G + V +A++ +YGK +D
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 155 LKLFDELPHK----DTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLT 210
L++F+ + + VSW ++I+ + +A ELFR+M+ G ++ TI ++L
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV-AGVKPNHVTIPSMLP 396
Query: 211 ACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIIT 270
AC L GR+ H A+R+ L N+ V +ALI Y KCGR I
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR----------------IN 440
Query: 271 LTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGL 330
L++I +F+ MP KN V +N+L+ G+ +GKA E + +F L+ L
Sbjct: 441 LSQI---------------VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 331 VLTEFTLTSVVNACGLIMEAKLSEQIHGFVM---KFGLGSNDCIEAALLDMLTRCGRMAD 387
+ TS+++ACG + E F M ++G+ + ++++L R G++ +
Sbjct: 486 KPDFISFTSLLSACGQV--GLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 388 AEKMFYRWPTDRDDSIIWTSMI 409
A + P + DS +W +++
Sbjct: 544 AYDLIKEMPFE-PDSCVWGALL 564
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/813 (31%), Positives = 431/813 (53%), Gaps = 53/813 (6%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
+V L + I ++ K L D G+ L+SA+ K G ++ A K+F + + N V+ L+
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 73 GLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTA-----CIRLLELELGFQIHALIVK 127
GL + EEA +LF M S V E S+V +L++ + L+ G ++H ++
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEYSLAEEVGLKKGREVHGHVIT 341
Query: 128 MGCVD-SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAF 186
G VD V + N L+ +Y K D ++F + KD+VSWN++I+ + + +A
Sbjct: 342 TGLVDFMVGIGNGLVNMYAKCGSIAD-ARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAV 400
Query: 187 ELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGF 246
E ++ M+R + FT+ + L++C G+ +H ++++G+ N+SV+NAL+
Sbjct: 401 ERYKSMRRHD-ILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 247 YTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALL 306
Y E GY++ +IF MPE + VS+N+++
Sbjct: 460 YA-------------------------------ETGYLNECRKIFSSMPEHDQVSWNSII 488
Query: 307 AGYCKNGKAM-EALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGL 365
++ +++ EA+ F+ G L T +SV++A + +L +QIHG +K +
Sbjct: 489 GALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNI 548
Query: 366 GSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAI-LL 424
E AL+ +CG M EK+F R +R D++ W SMI GY + A+ L+
Sbjct: 549 ADEATTENALIACYGKCGEMDGCEKIFSRM-AERRDNVTWNSMISGYIHNELLAKALDLV 607
Query: 425 FHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYF 484
+ Q+ + D +VL ++ E G ++H+ +++ SD+ V +++V MY
Sbjct: 608 WFMLQTGQRL--DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYS 665
Query: 485 KCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSME-KASIKPDAITFV 543
KC + A++ FN MP + SWN +I+G+ H QG+EAL ++ +M+ PD +TFV
Sbjct: 666 KCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFV 725
Query: 544 LIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNM 603
++SA + L ++ K F SM Y + P EH++ + VLG G L++ E+ I M
Sbjct: 726 GVLSACSHAGL--LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKM 783
Query: 604 PFQPKVSVWRALLDSCRIRLN---TTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWH 660
P +P V +WR +L +C R N +GK+ A+ + +EP++ Y+L+ N+Y++ GRW
Sbjct: 784 PMKPNVLIWRTVLGAC-CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWE 842
Query: 661 NSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAG 720
+ R+ M++ +K SW+ ++ VH F DKSHP IY L+ L + AG
Sbjct: 843 DLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Query: 721 YVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQ-PVRIVKNILTCGDCHSFL 779
YVP T F L+++E+ K++ L YHS KLA + L + P+RI+KN+ CGDCHS
Sbjct: 903 YVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAF 962
Query: 780 KYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
KY+S + R+I LRD++ FHHF +G CSC D+W
Sbjct: 963 KYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 212 bits (540), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 166/618 (26%), Positives = 302/618 (48%), Gaps = 54/618 (8%)
Query: 12 GEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLI 71
G A+ H+ L K L++D N LI+AYL+ G A K+F + N VS+ ++
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 72 SGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTAC--IRLLELELGFQIHALIVKMG 129
SG ++ G +EA+ M EGI N+++FV++L AC I + + G QIH L+ K+
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLS 134
Query: 130 CVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELF 189
V+N L+ +Y K + Y L F ++ K++VSWN++IS + AF +F
Sbjct: 135 YAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIF 194
Query: 190 RDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTK 249
M+ D +Y S + TAC+ + +R+
Sbjct: 195 SSMQYDGSRPTEYTFGSLVTTACS----------LTEPDVRL------------------ 226
Query: 250 CGRVKDVVALLERMPVM-DIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAG 308
++ ++ +++ ++ D+ + ++ A+ + G + A ++F++M +N+V+ N L+ G
Sbjct: 227 ---LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVG 283
Query: 309 YCKNGKAMEALGLF------VKLLEEGLV--LTEFTLTSVVNACGLIMEAKLSEQIHGFV 360
+ EA LF + + E V L+ F S+ GL K ++HG V
Sbjct: 284 LVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL----KKGREVHGHV 339
Query: 361 MKFGLGSNDC-IEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
+ GL I L++M +CG +ADA ++FY + TD+ DS+ W SMI G ++G
Sbjct: 340 ITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY-FMTDK-DSVSWNSMITGLDQNGCFI 397
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSM 479
A+ + +S ++P L S L C +L + ++G+QIH +LK G ++ V+N++
Sbjct: 398 EAVERY-KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNAL 456
Query: 480 VSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAG-HLLHRQGDEALAVWSSMEKASIKPD 538
+++Y + ++ K F+ MP HD VSWN +I R EA+ + + ++A K +
Sbjct: 457 MTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLN 516
Query: 539 AITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEE 598
ITF ++SA + + + L++K E T+E+ +L++ G G ++ E+
Sbjct: 517 RITFSSVLSAVSSLSFGELGK-QIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEK 573
Query: 599 TINNMPFQPKVSVWRALL 616
+ M + W +++
Sbjct: 574 IFSRMAERRDNVTWNSMI 591
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 451 LGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGL 510
+G + HS K D+ + N++++ Y + + +A K F++MP + VSW +
Sbjct: 14 VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACI 73
Query: 511 IAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISA 548
++G+ + + EAL M K I + FV ++ A
Sbjct: 74 VSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRA 111
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/757 (30%), Positives = 392/757 (51%), Gaps = 68/757 (8%)
Query: 88 FRMRSEGIVPNEHS-FVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGK 146
F ++ NE S ++++ C+ L +L+ Q H +++ G + + L +
Sbjct: 18 FSNPNQPTTNNERSRHISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAAL 74
Query: 147 FSFC-LDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTI 205
SF L+Y K+FDE+P ++ +WNT+I + + + + F DM ++ + +T
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 206 STLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPV 265
L+ A L G+++H A++ +G+++ V N+LI Y CG +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDL------------ 182
Query: 266 MDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKL 325
D A ++F + EK+ VS+N+++ G+ + G +AL LF K+
Sbjct: 183 -------------------DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 326 LEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRM 385
E + + T+ V++AC I + Q+ ++ + + N + A+LDM T+CG +
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 386 ADAEKMF--------YRWPTDRD---------------------DSIIWTSMICGYARSG 416
DA+++F W T D D + W ++I Y ++G
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 417 KPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVA 476
KP A+++FH+ Q + + ++I L S L C +G E+G+ IHSY K G + V
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 477 NSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIK 536
++++ MY KC ++ + + FN + D+ W+ +I G +H G+EA+ ++ M++A++K
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 537 PDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEA 596
P+ +TF + A +T L VD LF M++ Y I P +HYA +V VLG G+LE+A
Sbjct: 464 PNGVTFTNVFCACSHTGL--VDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 597 EETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSS 656
+ I MP P SVW ALL +C+I N + + +L +EP++ ++L+SN+Y+
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 581
Query: 657 GRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILEC 716
G+W N +R+ MR G +K P S I +H F D +HP + +Y L ++ +
Sbjct: 582 GKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKL 641
Query: 717 LKAGYVPDTSFVLHEVEEHQ-KKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDC 775
GY P+ S VL +EE + K+ L HS KLA YGL++T A + +R++KN+ CGDC
Sbjct: 642 KSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDC 701
Query: 776 HSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
HS K +S + REI +RD FHHF NGQCSC D+W
Sbjct: 702 HSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 206 bits (524), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 254/516 (49%), Gaps = 15/516 (2%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPL--ISAYLKLGHVADAYKIFYGLSSPNVVSF 67
+C + K H +I+ D + L ++A + A K+F + PN ++
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 68 TSLISGLAKLGREEEAIELFFRMRSEG-IVPNEHSFVAILTACIRLLELELGFQIHALIV 126
+LI A +I F M SE PN+++F ++ A + L LG +H + V
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 127 KMGCVDSVFVTNALMGLYGKFSFC--LDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
K VFV N+L+ Y FS C LD K+F + KD VSWN++I+ V + +K
Sbjct: 159 KSAVGSDVFVANSLIHCY--FS-CGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK 215
Query: 185 AFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALI 244
A ELF+ M+ ++ + T+ +L+AC L GR V ++ + NL++ NA++
Sbjct: 216 ALELFKKMESED-VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 245 GFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNA 304
YTKCG ++D L + M D +T T ++ Y + A E+ + MP+K+ V++NA
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 305 LLAGYCKNGKAMEALGLFVKL-LEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKF 363
L++ Y +NGK EAL +F +L L++ + L + TL S ++AC + +L IH ++ K
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 364 GLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAIL 423
G+ N + +AL+ M ++CG + + ++F ++ D +W++MI G A G A+
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNS--VEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 424 LFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQI-HSYALKTGFSSDLGVANSMVSM 482
+F++ Q EA V P+ + T+V C G + + + H G + +V +
Sbjct: 453 MFYKMQ-EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDV 511
Query: 483 YFKCCNMSNAIKAFNKMPSHDIVS-WNGLIAGHLLH 517
+ + A+K MP S W L+ +H
Sbjct: 512 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 198/438 (45%), Gaps = 67/438 (15%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
++ + + +SL +++H +K + D N LI Y G + A K+F + +V
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV 197
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
VS+ S+I+G + G ++A+ELF +M SE + + + V +L+AC ++ LE G Q+ +
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 125 IVKMGCVDSVFVTNALMGLYGK----------------------------FSFCLDY--L 154
I + ++ + NA++ +Y K ++ DY
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 155 LKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTG 214
++ + +P KD V+WN +IS+ + +A +F +++ ++ T+ + L+AC
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 215 CFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEI 274
L GR +H++ + G+ N V +ALI Y+KCG ++
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK------------------- 418
Query: 275 IIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTE 334
+ E+F+ + +++ ++A++ G +G EA+ +F K+ E +
Sbjct: 419 ------------SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 335 FTLTSVVNAC---GLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKM 391
T T+V AC GL+ EA+ H +G+ + A ++D+L R G + A K
Sbjct: 467 VTFTNVFCACSHTGLVDEAE--SLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 392 FYRWPTDRDDSIIWTSMI 409
P S +W +++
Sbjct: 525 IEAMPIPPSTS-VWGALL 541
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%)
Query: 3 NSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSP 62
++L Q G + L + IH+ + K + + + LI Y K G + + ++F +
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR 429
Query: 63 NVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTAC 109
+V ++++I GLA G EA+++F++M+ + PN +F + AC
Sbjct: 430 DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC 476
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/769 (31%), Positives = 399/769 (51%), Gaps = 78/769 (10%)
Query: 117 LGFQIHALIVKMGCVDS-VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISS 175
LG IH ++K G +S V +A MG YG+ L + KLFDE+P +D ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGR-CVSLGFANKLFDEMPKRDDLAWNEIVMV 63
Query: 176 VVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGA 235
+ +EKA ELFR+M+ D T+ LL C+ EGR +H + +R+GL +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLES 122
Query: 236 NLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMP 295
N+S+ N+LI Y++ G+++ + M ++ + I+ +Y + GYVD A+ + D+M
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 296 ----EKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAK 351
+ + V++N+LL+GY G + +A+ + ++ GL + +++S++ A K
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 352 LSEQIHGFVMKFGLGSNDCIEAALLDMLTRCG-----RMA-------------------- 386
L + IHG++++ L + +E L+DM + G RM
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 387 ------DAEKMFYRWPTD--RDDSIIWTSMICGYARSGKPE------------------- 419
DAE + R + + D+I W S+ GYA GKPE
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 420 ----------------HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSY 463
+A+ +F + Q E V P+ ++++L + G L GK++H +
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEG-VGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 464 ALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEA 523
L+ D VA ++V MY K ++ +AI+ F + + + SWN ++ G+ + +G+E
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 524 LAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASL 583
+A +S M +A ++PDAITF ++S + N LV K F M++ Y I PT EH + +
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCK--NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539
Query: 584 VSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDP 643
V +LG G+L+EA + I M +P ++W A L SC+I + + + K + +EP +
Sbjct: 540 VDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNS 599
Query: 644 ATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREK 703
A Y+++ NLYS+ RW + E +R MR R SWI VH FY K+HP E
Sbjct: 600 ANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEG 659
Query: 704 DIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPV 763
DIY L L+ E K+GYVPDTS + ++ + +K+ L H+ KLA TYGL+ P+
Sbjct: 660 DIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPI 719
Query: 764 RIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
R+VKN C D H+ KY+SV+ REI L++ + HHF +G+CSC D W
Sbjct: 720 RVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 173/411 (42%), Gaps = 76/411 (18%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
L+ + G + L KAIH +++ L D LI Y+K G++ A +F + + N+
Sbjct: 232 LQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI 291
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
V++ SL+SGL+ ++A L RM EGI P+ ++ ++ + L
Sbjct: 292 VAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL------------ 339
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
GK LD + K+ ++ + VSW + S +
Sbjct: 340 --------------------GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 185 AFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLM-EGRAVHAHAIRIGLGANLSVNNAL 243
A ++F M+ + G + T+STLL GC L+ G+ VH +R L + V AL
Sbjct: 380 ALKVFIKMQEE-GVGPNAATMSTLLK-ILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 437
Query: 244 IGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYN 303
+ Y K G ++ A+EIF + K+ S+N
Sbjct: 438 VDMYGKSGDLQS-------------------------------AIEIFWGIKNKSLASWN 466
Query: 304 ALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEAKLSEQIHGFV 360
+L GY G+ E + F +LE G+ T TSV++ C GL+ E + +
Sbjct: 467 CMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEG----WKYFDL 522
Query: 361 MKFGLGSNDCIE--AALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
M+ G IE + ++D+L R G + +A F + + + D+ IW + +
Sbjct: 523 MRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWD-FIQTMSLKPDATIWGAFL 572
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 247/793 (31%), Positives = 405/793 (51%), Gaps = 41/793 (5%)
Query: 21 HASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGRE 80
HA +I D L LG + A IF + P+V F L+ G +
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 81 EEAIELFFRMR-SEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNA 139
++ +F +R S + PN ++ ++A + G IH V GC + + +
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 140 LMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFT 199
++ +Y KF + ++ K+FD +P KDT+ WNT+IS Y ++ ++FRD+ ++
Sbjct: 160 IVKMYFKF-WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 200 VDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVAL 259
+D T+ +L A L G +H+ A + G ++ V I Y+KCG++K AL
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278
Query: 260 LERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEAL 319
+ EF D+ V+YNA++ GY NG+ +L
Sbjct: 279 ------------------FREFRKPDI-------------VAYNAMIHGYTSNGETELSL 307
Query: 320 GLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDML 379
LF +L+ G L TL S+V G +M L IHG+ +K S+ + AL +
Sbjct: 308 SLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVY 364
Query: 380 TRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEI 439
++ + A K+F P S W +MI GY ++G E AI LF + Q ++ P+ +
Sbjct: 365 SKLNEIESARKLFDESPEKSLPS--WNAMISGYTQNGLTEDAISLFREMQ-KSEFSPNPV 421
Query: 440 ALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKM 499
+T +L C LG +GK +H T F S + V+ +++ MY KC +++ A + F+ M
Sbjct: 422 TITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM 481
Query: 500 PSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDS 559
+ V+WN +I+G+ LH QG EAL ++ M + I P +TF+ ++ Y ++ LV
Sbjct: 482 TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL--YACSHAGLVKE 539
Query: 560 CRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSC 619
++F SM Y EP+ +HYA +V +LG G L+ A + I M +P SVW LL +C
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGAC 599
Query: 620 RIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPS 679
RI +T + + V++ + ++P + ++L+SN++S+ + + VR+ +++ K P
Sbjct: 600 RIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659
Query: 680 RSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKD 739
+ I H F D+SHP+ K+IY LE L + +AGY P+T LH+VEE +++
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEEREL 719
Query: 740 FLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFH 799
+ HS +LA +GL+ T G +RI+KN+ C DCH+ K +S +T R I +RDA+ FH
Sbjct: 720 MVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFH 779
Query: 800 HFLNGQCSCKDYW 812
HF +G CSC DYW
Sbjct: 780 HFKDGVCSCGDYW 792
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 128/546 (23%), Positives = 239/546 (43%), Gaps = 52/546 (9%)
Query: 17 AKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAK 76
+ IH + + + G+ ++ Y K V DA K+F + + + + ++ISG K
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 77 LGREEEAIELFFRMRSEGIVP-NEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVF 135
E+I++F + +E + + + IL A L EL LG QIH+L K GC +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 136 VTNALMGLYGKFSFCLDYLL--KLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMK 193
V + LY K C + LF E D V++N +I + E E + LF+++
Sbjct: 258 VLTGFISLYSK---CGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM 314
Query: 194 RDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRV 253
STL++ LM A+H + ++ ++ SV+ AL Y+K +
Sbjct: 315 LSGA----RLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 254 KDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNG 313
+ A ++FD+ PEK+ S+NA+++GY +NG
Sbjct: 371 ES-------------------------------ARKLFDESPEKSLPSWNAMISGYTQNG 399
Query: 314 KAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEA 373
+A+ LF ++ + T+T +++AC + L + +H V S+ +
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVST 459
Query: 374 ALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEAT 433
AL+ M +CG +A+A ++F + + + W +MI GY G+ + A+ +F++ +
Sbjct: 460 ALIGMYAKCGSIAEARRLFDLMT--KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG- 516
Query: 434 VVPDEIALTSVLGVCGTLGFHEMGKQI-HSYALKTGFSSDLGVANSMVSMYFKCCNMSNA 492
+ P + VL C G + G +I +S + GF + MV + + ++ A
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 493 IKAFNKM---PSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAY 549
++ M P + W L+ +H+ D LA S + + PD + + +++S
Sbjct: 577 LQFIEAMSIEPGSSV--WETLLGACRIHK--DTNLARTVSEKLFELDPDNVGYHVLLSNI 632
Query: 550 RYTNLN 555
+ N
Sbjct: 633 HSADRN 638
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 6/300 (2%)
Query: 12 GEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLI 71
G + L AIH +K L + Y KL + A K+F ++ S+ ++I
Sbjct: 333 GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 72 SGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCV 131
SG + G E+AI LF M+ PN + IL+AC +L L LG +H L+
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFE 452
Query: 132 DSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRD 191
S++V+ AL+G+Y K + +LFD + K+ V+WNT+IS + ++A +F +
Sbjct: 453 SSIYVSTALIGMYAKCG-SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 192 MKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAI-RIGLGANLSVNNALIGFYTKC 250
M ++G T T +L AC+ ++ EG + I R G ++ ++ +
Sbjct: 512 M-LNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 251 GRVKDVVALLERMPVMDIITLTEIIIAYMEFGY-VDLAVEIFDKMPE--KNSVSYNALLA 307
G ++ + +E M + ++ E ++ +LA + +K+ E ++V Y+ LL+
Sbjct: 571 GHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLS 630
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTS 69
Q G +SL K +H + E LI Y K G +A+A ++F ++ N V++ +
Sbjct: 432 QLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNT 491
Query: 70 LISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMG 129
+ISG G+ +EA+ +F+ M + GI P +F+ +L AC HA +VK G
Sbjct: 492 MISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC-----------SHAGLVKEG 540
Query: 130 CVDSVFVTNALMGLYG 145
D +F N+++ YG
Sbjct: 541 --DEIF--NSMIHRYG 552
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/680 (32%), Positives = 369/680 (54%), Gaps = 7/680 (1%)
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
++F N L+ Y K + + F++LP +D V+WN +I A + + M
Sbjct: 71 NLFSWNNLLLAYSKAGL-ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGR 252
RD + T+ T+L + + G+ +H I++G + L V + L+ Y G
Sbjct: 130 MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 253 VKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKN 312
+ D + + + + ++ + G ++ A+++F M EK+SVS+ A++ G +N
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQN 248
Query: 313 GKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIE 372
G A EA+ F ++ +GL + ++ SV+ ACG + +QIH +++ + +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 373 AALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEA 432
+AL+DM +C + A+ +F R + + + WT+M+ GY ++G+ E A+ +F Q +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDR--MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ-RS 365
Query: 433 TVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNA 492
+ PD L + C + E G Q H A+ +G + V+NS+V++Y KC ++ ++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 493 IKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYT 552
+ FN+M D VSW +++ + + E + ++ M + +KPD +T +ISA +
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC--S 483
Query: 553 NLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVW 612
LV+ ++ F M + Y I P+ HY+ ++ + G LEEA IN MPF P W
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGW 543
Query: 613 RALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREK 672
LL +CR + N IGK A+ ++ ++P PA Y L+S++Y+S G+W + +R MREK
Sbjct: 544 TTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREK 603
Query: 673 GFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEV 732
+K P +SWI + K+HSF D+S P IY+ LE L + + GY PDTSFV H+V
Sbjct: 604 NVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDV 663
Query: 733 EEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFL 792
EE K L YHS +LA +GL+ P+GQP+R+ KN+ C DCH+ K++S VT REI +
Sbjct: 664 EEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILV 723
Query: 793 RDASGFHHFLNGQCSCKDYW 812
RDA FH F +G CSC D+W
Sbjct: 724 RDAVRFHRFKDGTCSCGDFW 743
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 212/452 (46%), Gaps = 77/452 (17%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
L+LS G VSL K IH +IKL E G+PL+ Y +G ++DA K+FYGL N
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 65 VSFTSL------------------------------ISGLAKLGREEEAIELFFRMRSEG 94
V + SL I GLA+ G +EAIE F M+ +G
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQG 265
Query: 95 IVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYL 154
+ +++ F ++L AC L + G QIHA I++ D ++V +AL+ +Y K CL Y
Sbjct: 266 LKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK-CLHYA 324
Query: 155 LKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTG 214
+FD + K+ VSW ++ E+A ++F DM+R +G D++T+ ++AC
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR-SGIDPDHYTLGQAISACAN 383
Query: 215 CFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEI 274
L EG H AI GL ++V+N+L+ Y KCG + D L M V D ++ T +
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 275 IIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTE 334
+ AY +FG +A+E + LF K+++ GL
Sbjct: 444 VSAYAQFG-------------------------------RAVETIQLFDKMVQHGLKPDG 472
Query: 335 FTLTSVVNAC---GLIMEA----KLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMAD 387
TLT V++AC GL+ + KL +G V G S ++D+ +R GR+ +
Sbjct: 473 VTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS------CMIDLFSRSGRLEE 526
Query: 388 AEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
A + P D+I WT+++ G E
Sbjct: 527 AMRFINGMPFP-PDAIGWTTLLSACRNKGNLE 557
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/616 (21%), Positives = 260/616 (42%), Gaps = 105/616 (17%)
Query: 18 KAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKL 77
K IH ++I+ L +T N ++ AY + A ++F + PN+ S+ +L+ +K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 78 GREEEAIELFFRMRS-EGIVPN----EHSFVAILTACIR--------------------L 112
G E F ++ +G+ N +S ++ A ++ +
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 113 LELE-------LGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKD 165
L+L LG QIH ++K+G + V + L+ +Y C+ K+F L ++
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG-CISDAKKVFYGLDDRN 204
Query: 166 TVSWNTVISSVVNEFEYEKAFELFRDMKRDN----------------------------- 196
TV +N+++ ++ E A +LFR M++D+
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 197 GFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDV 256
G +D + ++L AC G + EG+ +HA IR ++ V +ALI Y KC +
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYA 324
Query: 257 VALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAM 316
+ +RM ++++ T +++ Y + G+A
Sbjct: 325 KTVFDRMKQKNVVSWTAMVVGYGQ-------------------------------TGRAE 353
Query: 317 EALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALL 376
EA+ +F+ + G+ +TL ++AC + + Q HG + GL + +L+
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 377 DMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVP 436
+ +CG + D+ ++F + D++ WT+M+ YA+ G+ I LF + + + P
Sbjct: 414 TLYGKCGDIDDSTRLFNE--MNVRDAVSWTAMVSAYAQFGRAVETIQLFDK-MVQHGLKP 470
Query: 437 DEIALTSVLGVCGTLGFHEMGKQIHSYALKT---GFSSDLGVANSMVSMYFKCCNMSNAI 493
D + LT V+ C G E G++ + L T G +G + M+ ++ + + A+
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRY--FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 494 KAFNKMP-SHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYT 552
+ N MP D + W L++ +G+ + W++ + P ++S+ Y
Sbjct: 529 RFINGMPFPPDAIGWTTLLSA--CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSI-YA 585
Query: 553 NLNLVDSCRKLFLSMK 568
+ DS +L M+
Sbjct: 586 SKGKWDSVAQLRRGMR 601
Score = 123 bits (308), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 154/308 (50%), Gaps = 7/308 (2%)
Query: 12 GEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLI 71
G ++ K IHA +I+ + G+ LI Y K + A +F + NVVS+T+++
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMV 343
Query: 72 SGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCV 131
G + GR EEA+++F M+ GI P+ ++ ++AC + LE G Q H + G +
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403
Query: 132 DSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRD 191
V V+N+L+ LYGK +D +LF+E+ +D VSW ++S+ + +LF
Sbjct: 404 HYVTVSNSLVTLYGKCGD-IDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDK 462
Query: 192 MKRDNGFTVDYFTISTLLTACTGCFVLMEG-RAVHAHAIRIGLGANLSVNNALIGFYTKC 250
M + +G D T++ +++AC+ ++ +G R G+ ++ + +I +++
Sbjct: 463 MVQ-HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 251 GRVKDVVALLERMPV-MDIITLTEIIIAYMEFGYVDL---AVEIFDKMPEKNSVSYNALL 306
GR+++ + + MP D I T ++ A G +++ A E ++ + Y L
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581
Query: 307 AGYCKNGK 314
+ Y GK
Sbjct: 582 SIYASKGK 589
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/652 (34%), Positives = 371/652 (56%), Gaps = 19/652 (2%)
Query: 166 TVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLT----ACTGCFVLMEG 221
+V T I+++ ++ +AF+ FR ++ FT ++L T +CT L G
Sbjct: 13 SVDPATAIATLCSKGNLREAFQRFR---------LNIFTNTSLFTPFIQSCTTRQSLPSG 63
Query: 222 RAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEF 281
+ +H + G ++ + N L+ Y+K G VA+ RM + ++ +I Y+
Sbjct: 64 KQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRA 123
Query: 282 GYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVV 341
G + A ++FD+MP++ ++NA++AG + E L LF ++ G E+TL SV
Sbjct: 124 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVF 183
Query: 342 NACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDD 401
+ + + +QIHG+ +K+GL + + ++L M R G++ D E + P +
Sbjct: 184 SGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR--N 241
Query: 402 SIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIH 461
+ W ++I G A++G PE +L ++ + P++I +VL C L G+QIH
Sbjct: 242 LVAWNTLIMGNAQNGCPE-TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH 300
Query: 462 SYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGD 521
+ A+K G SS + V +S++SMY KC + +A KAF++ D V W+ +I+ + H QGD
Sbjct: 301 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 360
Query: 522 EALAVWSSM-EKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHY 580
EA+ ++++M E+ +++ + + F+ ++ A ++ L D +LF M Y +P +HY
Sbjct: 361 EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK--DKGLELFDMMVEKYGFKPGLKHY 418
Query: 581 ASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEP 640
+V +LG G L++AE I +MP + + +W+ LL +C I N + +RV K IL ++P
Sbjct: 419 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDP 478
Query: 641 QDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHP 700
D A Y+L++N+++S+ RW + VR+ MR+K +K SW H+ +VH F + D+S
Sbjct: 479 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 538
Query: 701 REKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAG 760
+ K+IYS L+ L LE GY PDT+ VLH+++E +K+ L HS KLA + L+ P G
Sbjct: 539 KSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEG 598
Query: 761 QPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
P+RI+KN+ C DCH KY+SV+ REI LRD S FHHF+NG+CSC DYW
Sbjct: 599 APIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 235/534 (44%), Gaps = 79/534 (14%)
Query: 62 PNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQI 121
P V + I+ L G EA + F R+ I N F + +C L G Q+
Sbjct: 11 PLSVDPATAIATLCSKGNLREAFQRF-RL---NIFTNTSLFTPFIQSCTTRQSLPSGKQL 66
Query: 122 HALIVKMGCVDSVFVTNALMGLYGKF----------------SFCLDYLL---------- 155
H L+V G F+ N LM +Y K ++ +L
Sbjct: 67 HCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDL 126
Query: 156 ----KLFDELPHKDTVSWNTVISSVVNEFEY-EKAFELFRDMKRDNGFTVDYFTISTLLT 210
K+FDE+P + +WN +I+ ++ +FE+ E+ LFR+M GF+ D +T+ ++ +
Sbjct: 127 VNARKVFDEMPDRKLTTWNAMIAGLI-QFEFNEEGLSLFREM-HGLGFSPDEYTLGSVFS 184
Query: 211 ACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIIT 270
G + G+ +H + I+ GL +L VN++L Y + G+++D
Sbjct: 185 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD--------------- 229
Query: 271 LTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGL 330
EI+I MP +N V++N L+ G +NG L L+ + G
Sbjct: 230 -GEIVIR---------------SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGC 273
Query: 331 VLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEK 390
+ T +V+++C + +QIH +K G S + ++L+ M ++CG + DA K
Sbjct: 274 RPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAK 333
Query: 391 MFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGT 450
F + +D ++W+SMI Y G+ + AI LF+ + + +E+A ++L C
Sbjct: 334 AFSE--REDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSH 391
Query: 451 LGFHEMGKQIHSYAL-KTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWN 508
G + G ++ + K GF L +V + + + A MP DIV W
Sbjct: 392 SGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWK 451
Query: 509 GLIAGHLLHRQGDEALAVWSSMEKASIKP-DAITFVLI----ISAYRYTNLNLV 557
L++ +H+ + A V+ E I P D+ +VL+ SA R+ +++ V
Sbjct: 452 TLLSACNIHKNAEMAQRVFK--EILQIDPNDSACYVLLANVHASAKRWRDVSEV 503
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 177/378 (46%), Gaps = 42/378 (11%)
Query: 37 NPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV 96
N LI+ Y++ G + +A K+F + + ++ ++I+GL + EE + LF M G
Sbjct: 114 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 173
Query: 97 PNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLK 156
P+E++ ++ + L + +G QIH +K G + V ++L +Y + D +
Sbjct: 174 PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI- 232
Query: 157 LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCF 216
+ +P ++ V+WNT+I E L++ MK +G + T T+L++C+
Sbjct: 233 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKI-SGCRPNKITFVTVLSSCSDLA 291
Query: 217 VLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIII 276
+ +G+ +HA AI+IG + ++V ++LI Y+KCG + D D + + +I
Sbjct: 292 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 351
Query: 277 AYMEFGYVDLAVEIFDKMPEK-----NSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
AY G D A+E+F+ M E+ N V++ LL +G + L LF ++E+
Sbjct: 352 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEK--- 408
Query: 332 LTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKM 391
+GF K GL C+ +D+L R G + AE +
Sbjct: 409 -------------------------YGF--KPGLKHYTCV----VDLLGRAGCLDQAEAI 437
Query: 392 FYRWPTDRDDSIIWTSMI 409
P + D +IW +++
Sbjct: 438 IRSMPI-KTDIVIWKTLL 454
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 3/283 (1%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
VS+ + IH IK LE D + L Y++ G + D + + N+V++ +LI G
Sbjct: 192 VSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMG 251
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDS 133
A+ G E + L+ M+ G PN+ +FV +L++C L G QIHA +K+G
Sbjct: 252 NAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV 311
Query: 134 VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMK 193
V V ++L+ +Y K CL K F E +D V W+++IS+ + ++A ELF M
Sbjct: 312 VAVVSSLISMYSKCG-CLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 370
Query: 194 RDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAI-RIGLGANLSVNNALIGFYTKCGR 252
++ LL AC+ + +G + + + G L ++ + G
Sbjct: 371 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 430
Query: 253 VKDVVALLERMPV-MDIITLTEIIIAYMEFGYVDLAVEIFDKM 294
+ A++ MP+ DI+ ++ A ++A +F ++
Sbjct: 431 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEI 473
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/607 (34%), Positives = 335/607 (55%), Gaps = 37/607 (6%)
Query: 206 STLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPV 265
+TLL CT +L++GR VHAH ++ ++ + N L+ Y KCG +++ + E+MP
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 266 MDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKL 325
D +T T L++GY ++ + +AL F ++
Sbjct: 124 RDFVTWT-------------------------------TLISGYSQHDRPCDALLFFNQM 152
Query: 326 LEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRM 385
L G EFTL+SV+ A Q+HGF +K G SN + +ALLD+ TR G M
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 386 ADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVL 445
DA+ +F + D + W ++I G+AR E A+ LF Q P + S+
Sbjct: 213 DDAQLVFDALESRND--VSWNALIAGHARRSGTEKALELF-QGMLRDGFRPSHFSYASLF 269
Query: 446 GVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIV 505
G C + GF E GK +H+Y +K+G N+++ MY K ++ +A K F+++ D+V
Sbjct: 270 GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
Query: 506 SWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFL 565
SWN L+ + H G EA+ + M + I+P+ I+F+ +++A ++ L+D +
Sbjct: 330 SWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS--GLLDEGWHYYE 387
Query: 566 SMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNT 625
MK I P + HY ++V +LG G L A I MP +P ++W+ALL++CR+ NT
Sbjct: 388 LMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNT 446
Query: 626 TIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIH 685
+G A+H+ ++P DP ++++ N+Y+S GRW+++ VR+ M+E G +K P+ SW+
Sbjct: 447 ELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI 506
Query: 686 QNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHS 745
+N +H F D+ HP+ ++I E ++ + + GYVPDTS V+ V++ +++ L YHS
Sbjct: 507 ENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHS 566
Query: 746 AKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQ 805
K+A + LL TP G + I KNI CGDCH+ +K S V REI +RD + FHHF +G
Sbjct: 567 EKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGN 626
Query: 806 CSCKDYW 812
CSCKDYW
Sbjct: 627 CSCKDYW 633
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 169/333 (50%), Gaps = 6/333 (1%)
Query: 17 AKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAK 76
+ +HA +++ + D GN L++ Y K G + +A K+F + + V++T+LISG ++
Sbjct: 79 GRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 77 LGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFV 136
R +A+ F +M G PNE + +++ A G Q+H VK G +V V
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 137 TNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDN 196
+AL+ LY ++ D L +FD L ++ VSWN +I+ EKA ELF+ M RD
Sbjct: 199 GSALLDLYTRYGLMDDAQL-VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD- 256
Query: 197 GFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDV 256
GF +F+ ++L AC+ L +G+ VHA+ I+ G N L+ Y K G + D
Sbjct: 257 GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDA 316
Query: 257 VALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMP----EKNSVSYNALLAGYCKN 312
+ +R+ D+++ ++ AY + G+ AV F++M N +S+ ++L +
Sbjct: 317 RKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
Query: 313 GKAMEALGLFVKLLEEGLVLTEFTLTSVVNACG 345
G E + + ++G+V + +VV+ G
Sbjct: 377 GLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 121/246 (49%), Gaps = 2/246 (0%)
Query: 20 IHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGR 79
+H +K + + G+ L+ Y + G + DA +F L S N VS+ +LI+G A+
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 80 EEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNA 139
E+A+ELF M +G P+ S+ ++ AC LE G +HA ++K G F N
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 140 LMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFT 199
L+ +Y K S + K+FD L +D VSWN+++++ ++A F +M+R G
Sbjct: 303 LLDMYAK-SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR-VGIR 360
Query: 200 VDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVAL 259
+ + ++LTAC+ +L EG + + G+ ++ + G + +
Sbjct: 361 PNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRF 420
Query: 260 LERMPV 265
+E MP+
Sbjct: 421 IEEMPI 426
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 418 PEHAILLFHQSQS-EATVVP-DEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGV 475
P + +LL S E + +P D ++L C G+ +H++ L++ F D+ +
Sbjct: 38 PSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVM 97
Query: 476 ANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASI 535
N++++MY KC ++ A K F KMP D V+W LI+G+ H + +AL ++ M +
Sbjct: 98 GNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY 157
Query: 536 KPDAITFVLIISA 548
P+ T +I A
Sbjct: 158 SPNEFTLSSVIKA 170
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/659 (33%), Positives = 346/659 (52%), Gaps = 48/659 (7%)
Query: 155 LKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTG 214
L LFDE+P +D VSWN++IS V + A +LF +M ++ + G
Sbjct: 86 LNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER--------SVVSWTAMVNG 137
Query: 215 CFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEI 274
CF + G+V L +MPV D +
Sbjct: 138 CF--------------------------------RSGKVDQAERLFYQMPVKDTAAWNSM 165
Query: 275 IIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTE 334
+ Y++FG VD A+++F +MP KN +S+ ++ G +N ++ EAL LF +L + T
Sbjct: 166 VHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTS 225
Query: 335 FTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYR 394
T V+ AC + Q+HG ++K G + + A+L+ C R+ D+ K+F
Sbjct: 226 RPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE 285
Query: 395 WPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFH 454
+ +WT+++ GY+ + K E A+ +F +++P++ S L C LG
Sbjct: 286 --KVHEQVAVWTALLSGYSLNKKHEDALSIF-SGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 455 EMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGH 514
+ GK++H A+K G +D V NS+V MY N+++A+ F K+ IVSWN +I G
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGC 402
Query: 515 LLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKT-IYNI 573
H +G A ++ M + + +PD ITF ++SA ++ ++ RKLF M + I +I
Sbjct: 403 AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSAC--SHCGFLEKGRKLFYYMSSGINHI 460
Query: 574 EPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAK 633
+ +HY +V +LG G L+EAEE I M +P VW ALL +CR+ + G++ A
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAA 520
Query: 634 HILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFY 693
I ++ + A Y+L+SN+Y+S+GRW N +R M++ G K P SW++ + K H F+
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580
Query: 694 VRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYG 753
D+ H IY LE L + + GY PD LH+VE+ QK++ L+YHS +LA +G
Sbjct: 581 SGDQPHCSR--IYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFG 638
Query: 754 LLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
L+ T G V ++KN+ C DCH+ +K +S V REI LRD FHHF NG CSC DYW
Sbjct: 639 LINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/539 (24%), Positives = 246/539 (45%), Gaps = 62/539 (11%)
Query: 39 LISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPN 98
+I+ Y + + DA +F + +VVS+ S+ISG + G A++LF M +V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV-- 129
Query: 99 EHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLF 158
S+ A++ C R +++ Q L +M D+ N+++ Y +F +D LKLF
Sbjct: 130 --SWTAMVNGCFRSGKVD---QAERLFYQMPVKDTA-AWNSMVHGYLQFGK-VDDALKLF 182
Query: 159 DELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVL 218
++P K+ +SW T+I + +A +LF++M R + ++TAC
Sbjct: 183 KQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLR-CCIKSTSRPFTCVITACANAPAF 241
Query: 219 MEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAY 278
G VH I++G V+ +LI FY C R+ D
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGD----------------------- 278
Query: 279 MEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLT 338
+ ++FD+ + + ALL+GY N K +AL +F +L ++ + T
Sbjct: 279 --------SRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFA 330
Query: 339 SVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTD 398
S +N+C + +++HG +K GL ++ + +L+ M + G + DA +F +
Sbjct: 331 SGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK--IF 388
Query: 399 RDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGK 458
+ + W S+I G A+ G+ + A ++F Q PDEI T +L C GF E G+
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQ-MIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 459 QIHSYALKTGFSS-DLGVAN--SMVSMYFKCCNMSNAIKAFNKM---PSHDIVSWNGLIA 512
++ Y + +G + D + + MV + +C + A + +M P+ + W L++
Sbjct: 448 KLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMV--WLALLS 504
Query: 513 GHLLHR---QGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMK 568
+H +G++A A +++ S + + SA R++N++ KL + MK
Sbjct: 505 ACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVS------KLRVKMK 557
Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 183/382 (47%), Gaps = 38/382 (9%)
Query: 31 QDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRM 90
+DT N ++ YL+ G V DA K+F + NV+S+T++I GL + R EA++LF M
Sbjct: 157 KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM 216
Query: 91 RSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFC 150
I F ++TAC +G Q+H LI+K+G + +V+ +L+ Y
Sbjct: 217 LRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Query: 151 LDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLT 210
D K+FDE H+ W ++S ++E A +F M R N + T ++ L
Sbjct: 277 GDS-RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR-NSILPNQSTFASGLN 334
Query: 211 ACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIIT 270
+C+ L G+ +H A+++GL + V N+L+ Y+ G V D
Sbjct: 335 SCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVND--------------- 379
Query: 271 LTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGL 330
AV +F K+ +K+ VS+N+++ G ++G+ A +F +++
Sbjct: 380 ----------------AVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK 423
Query: 331 VLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND-CIE--AALLDMLTRCGRMAD 387
E T T +++AC + ++ + M G+ D I+ ++D+L RCG++ +
Sbjct: 424 EPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRKIQHYTCMVDILGRCGKLKE 482
Query: 388 AEKMFYRWPTDRDDSIIWTSMI 409
AE++ R + + ++W +++
Sbjct: 483 AEELIERMVV-KPNEMVWLALL 503
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 148/292 (50%), Gaps = 13/292 (4%)
Query: 252 RVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCK 311
R+ + + ++P + T++I Y + A+ +FD+MP ++ VS+N++++G +
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 312 NGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQI-HGFVMKFGLGSNDC 370
G A+ LF ++ E +V + T++VN C + +E++ + +K N
Sbjct: 110 CGDMNTAVKLFDEMPERSVV----SWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSM 165
Query: 371 IEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQS 430
+ L + G++ DA K+F + P + I WT+MICG ++ + A+ LF ++
Sbjct: 166 VHGYL-----QFGKVDDALKLFKQMPG--KNVISWTTMICGLDQNERSGEALDLF-KNML 217
Query: 431 EATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMS 490
+ T V+ C MG Q+H +K GF + V+ S+++ Y C +
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 491 NAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITF 542
++ K F++ + W L++G+ L+++ ++AL+++S M + SI P+ TF
Sbjct: 278 DSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTF 329
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 148/324 (45%), Gaps = 20/324 (6%)
Query: 20 IHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGR 79
+H +IKL + LI+ Y + D+ K+F V +T+L+SG + +
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 80 EEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNA 139
E+A+ +F M I+PN+ +F + L +C L L+ G ++H + VK+G FV N+
Sbjct: 307 HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366
Query: 140 LMGLY---GKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDN 196
L+ +Y G + + +K+F K VSWN++I + AF +F M R N
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFK----KSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 197 GFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGAN-----LSVNNALIGFYTKCG 251
D T + LL+AC+ C L +GR + + + G N + ++ +CG
Sbjct: 423 K-EPDEITFTGLLSACSHCGFLEKGRKLFYY---MSSGINHIDRKIQHYTCMVDILGRCG 478
Query: 252 RVKDVVALLERMPV----MDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLA 307
++K+ L+ERM V M + L + + + A + K+S +Y L
Sbjct: 479 KLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSN 538
Query: 308 GYCKNGKAMEALGLFVKLLEEGLV 331
Y G+ L VK+ + G++
Sbjct: 539 IYASAGRWSNVSKLRVKMKKNGIM 562
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%)
Query: 12 GEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLI 71
G + K +H +KL LE D GN L+ Y G+V DA +F + ++VS+ S+I
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 72 SGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQI 121
G A+ GR + A +F +M P+E +F +L+AC LE G ++
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKL 449
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/695 (30%), Positives = 373/695 (53%), Gaps = 41/695 (5%)
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
QIHA ++ +G S F+ L+ F + + ++FD+LP WN +I
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGD-ITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
++ A ++ +M+ + D FT LL AC+G L GR VHA R+G A++ V
Sbjct: 98 NHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFV 156
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
N LI Y KC R+ + E +P +PE+
Sbjct: 157 QNGLIALYAKCRRLGSARTVFEGLP-----------------------------LPERTI 187
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
VS+ A+++ Y +NG+ MEAL +F ++ + + L SV+NA + + K IH
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
V+K GL + +L M +CG++A A+ +F + + + I+W +MI GYA++G
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP--NLILWNAMISGYAKNGYAR 305
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSM 479
AI +FH+ ++ V PD I++TS + C +G E + ++ Y ++ + D+ +++++
Sbjct: 306 EAIDMFHEMINK-DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 480 VSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDA 539
+ M+ KC ++ A F++ D+V W+ +I G+ LH + EA++++ +ME+ + P+
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
Query: 540 ITFVLIISAYRYTNLNLVDSCRK--LFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAE 597
+TF+ ++ A ++ + R+ F + + I P +HYA ++ +LG G L++A
Sbjct: 425 VTFLGLLMACNHSGM-----VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 598 ETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSG 657
E I MP QP V+VW ALL +C+ + +G+ A+ + +++P + Y+ +SNLY+++
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR 539
Query: 658 RWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECL 717
W VR M+EKG K SW+ + ++ +F V DKSHPR ++I +E +
Sbjct: 540 LWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLK 599
Query: 718 KAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHS 777
+ G+V + LH++ + + ++ L HS ++A YGL++TP G P+RI KN+ C +CH+
Sbjct: 600 EGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHA 659
Query: 778 FLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
K +S + REI +RD + FHHF +G CSC DYW
Sbjct: 660 ATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/554 (23%), Positives = 246/554 (44%), Gaps = 42/554 (7%)
Query: 18 KAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKL 77
K IHA L+ L L+ LI A G + A ++F L P + + ++I G ++
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 78 GREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVT 137
++A+ ++ M+ + P+ +F +L AC L L++G +HA + ++G VFV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 138 NALMGLYGKFSFCLDYLLKLFD--ELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRD 195
N L+ LY K L +F+ LP + VSW ++S+ E +A E+F M++
Sbjct: 158 NGLIALYAKCRR-LGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 196 NGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKD 255
+ D+ + ++L A T L +GR++HA +++GL + +L Y KCG+V
Sbjct: 217 D-VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 256 VVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKA 315
L ++M ++I +I Y + GY A
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGY-------------------------------A 304
Query: 316 MEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAAL 375
EA+ +F +++ + + ++TS ++AC + + + ++ +V + + I +AL
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 376 LDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVV 435
+DM +CG + A +F R DR D ++W++MI GY G+ AI L+ ++ V
Sbjct: 365 IDMFAKCGSVEGARLVFDR-TLDR-DVVVWSAMIVGYGLHGRAREAISLY-RAMERGGVH 421
Query: 436 PDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKA 495
P+++ +L C G G + + ++ + + ++ A +
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Query: 496 FNKMPSHDIVS-WNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNL 554
MP V+ W L++ HR + L +++ + SI P + +S Y
Sbjct: 482 IKCMPVQPGVTVWGALLSACKKHRHVE--LGEYAAQQLFSIDPSNTGHYVQLSNL-YAAA 538
Query: 555 NLVDSCRKLFLSMK 568
L D ++ + MK
Sbjct: 539 RLWDRVAEVRVRMK 552
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 161/338 (47%), Gaps = 8/338 (2%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSP--NVVSFTSLI 71
+ + + +HA + +L + D N LI+ Y K + A +F GL P +VS+T+++
Sbjct: 135 LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIV 194
Query: 72 SGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCV 131
S A+ G EA+E+F +MR + P+ + V++L A L +L+ G IHA +VKMG
Sbjct: 195 SAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLE 254
Query: 132 DSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRD 191
+ +L +Y K + LFD++ + + WN +IS +A ++F +
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKI-LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHE 313
Query: 192 MKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCG 251
M + D +I++ ++AC L + R+++ + R ++ +++ALI + KCG
Sbjct: 314 MINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCG 372
Query: 252 RVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPE----KNSVSYNALLA 307
V+ + +R D++ + +I+ Y G A+ ++ M N V++ LL
Sbjct: 373 SVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 308 GYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACG 345
+G E F ++ + + + V++ G
Sbjct: 433 ACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLG 470
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
++ ++IHAS++K+ LE + L + Y K G VA A +F + SPN++ + ++IS
Sbjct: 237 DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMIS 296
Query: 73 GLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVD 132
G AK G EAI++F M ++ + P+ S + ++AC ++ LE ++ + + D
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
VF+++AL+ ++ K L +FD +D V W+ +I +A L+R M
Sbjct: 357 DVFISSALIDMFAKCGSVEGARL-VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGR 252
+R G + T LL AC ++ EG + +I + G
Sbjct: 416 ER-GGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGH 474
Query: 253 VKDVVALLERMPVMDIITL 271
+ +++ MPV +T+
Sbjct: 475 LDQAYEVIKCMPVQPGVTV 493
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTS 69
Q G + A++++ + + D + LI + K G V A +F +VV +++
Sbjct: 335 QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 70 LISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTAC 109
+I G GR EAI L+ M G+ PN+ +F+ +L AC
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMAC 434
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 243/807 (30%), Positives = 403/807 (49%), Gaps = 45/807 (5%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
+V + A+H ++K L +D GN L+S Y G V DA ++F + N+VS+ S+I
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 73 GLAKLGREEEAIELFFRMRSE----GIVPNEHSFVAILTACIRLLELELGFQIHALIVKM 128
+ G EE+ L M E +P+ + V +L C R E+ LG +H VK+
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 129 GCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFEL 188
+ + NALM +Y K C+ +F +K+ VSWNT++ E + F++
Sbjct: 322 RLDKELVLNNALMDMYSKCG-CITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Query: 189 FRDM-KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFY 247
R M D TI + C L + +H ++++ N V NA + Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 248 TKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLA 307
KCG + A +F + K S+NAL+
Sbjct: 441 AKCGSLS-------------------------------YAQRVFHGIRSKTVNSWNALIG 469
Query: 308 GYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGS 367
G+ ++ +L +++ GL+ FT+ S+++AC + +L +++HGF+++ L
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 529
Query: 368 NDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSII-WTSMICGYARSGKPEHAILLFH 426
+ + ++L + CG + + +F D S++ W ++I GY ++G P+ A+ +F
Sbjct: 530 DLFVYLSVLSLYIHCGELCTVQALF---DAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 427 QSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKC 486
Q + I++ V G C L +G++ H+YALK D +A S++ MY K
Sbjct: 587 QMVLYGIQLCG-ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 487 CNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLII 546
+++ + K FN + SWN +I G+ +H EA+ ++ M++ PD +TF+ ++
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 547 SAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETI-NNMPF 605
+A ++ L + + MK+ + ++P +HYA ++ +LG G L++A + M
Sbjct: 706 TACNHSGL--IHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSE 763
Query: 606 QPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELV 665
+ V +W++LL SCRI N +G++VA + +EP+ P Y+L+SNLY+ G+W + V
Sbjct: 764 EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKV 823
Query: 666 REDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDT 725
R+ M E RK SWI KV SF V ++ ++I S IL ++ K GY PDT
Sbjct: 824 RQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDT 883
Query: 726 SFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVV 785
V H++ E +K + L HS KLA TYGL+ T G +R+ KN+ C DCH+ K +S V
Sbjct: 884 MSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKV 943
Query: 786 TRREIFLRDASGFHHFLNGQCSCKDYW 812
REI +RD FHHF NG CSC DYW
Sbjct: 944 MEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 208/451 (46%), Gaps = 42/451 (9%)
Query: 105 ILTACIRLLELELGFQIHALIVKMGCV--DSVFVTNALMGLYGKFSFCLDYLLKLFDELP 162
+L A + ++E+G +IH L+ + D V T ++ +Y D +FD L
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTR-IITMYAMCGSPDDSRF-VFDALR 147
Query: 163 HKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGR 222
K+ WN VISS Y++ E F +M D+FT ++ AC G + G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 223 AVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFG 282
AVH ++ GL ++ V NAL+ FY G V D + L + M
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM------------------- 248
Query: 283 YVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEE---GLVLTEF-TLT 338
PE+N VS+N+++ + NG + E+ L +++EE G + + TL
Sbjct: 249 ------------PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 339 SVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTD 398
+V+ C E L + +HG+ +K L + AL+DM ++CG + +A+ +F +
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM--NN 354
Query: 399 RDDSIIWTSMICGYARSGKPEHAILLFHQSQSEA-TVVPDEIALTSVLGVCGTLGFHEMG 457
+ + W +M+ G++ G + Q + V DE+ + + + VC F
Sbjct: 355 NKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSL 414
Query: 458 KQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLH 517
K++H Y+LK F + VAN+ V+ Y KC ++S A + F+ + S + SWN LI GH
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 518 RQGDEALAVWSSMEKASIKPDAITFVLIISA 548
+L M+ + + PD+ T ++SA
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 427 QSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSY-ALKTGFSSDLGVANSMVSMYFK 485
+S S+A ++ E AL +L G EMG++IH + T +D + +++MY
Sbjct: 74 ESSSDAFLLVRE-ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAM 132
Query: 486 CCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSM-EKASIKPDAITFVL 544
C + ++ F+ + S ++ WN +I+ + + DE L + M + PD T+
Sbjct: 133 CGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPC 192
Query: 545 IISA-YRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNM 603
+I A +++ + + L + + ++ + +LVS G GF+ +A + + M
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGN----ALVSFYGTHGFVTDALQLFDIM 248
Query: 604 PFQPKVSVWRALL 616
P + VS W +++
Sbjct: 249 PERNLVS-WNSMI 260
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/711 (31%), Positives = 376/711 (52%), Gaps = 41/711 (5%)
Query: 105 ILTACIRLLELELGFQIHALIVK-MGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPH 163
+L I + LG +HA IVK + F+ N L+ +Y K L L P
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL-RLTPA 70
Query: 164 KDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRA 223
++ VSW ++IS + + A F +M+R+ G + FT A + + G+
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRRE-GVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 224 VHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGY 283
+HA A+ KCGR+ +D+ Y +
Sbjct: 130 IHALAV-------------------KCGRI------------LDVFVGCSAFDMYCKTRL 158
Query: 284 VDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNA 343
D A ++FD++PE+N ++NA ++ +G+ EA+ F++ T + +NA
Sbjct: 159 RDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNA 218
Query: 344 CGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSI 403
C + L Q+HG V++ G ++ + L+D +C ++ +E +F T +++
Sbjct: 219 CSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK--NAV 276
Query: 404 IWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSY 463
W S++ Y ++ + E A +L+ +S+ + D ++SVL C + E+G+ IH++
Sbjct: 277 SWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD-FMISSVLSACAGMAGLELGRSIHAH 335
Query: 464 ALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEA 523
A+K + V +++V MY KC + ++ +AF++MP ++V+ N LI G+ Q D A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 524 LAVWSSMEKASI--KPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYA 581
LA++ M P+ +TFV ++SA + V++ K+F SM++ Y IEP +EHY+
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSAC--SRAGAVENGMKIFDSMRSTYGIEPGAEHYS 453
Query: 582 SLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQ 641
+V +LG G +E A E I MP QP +SVW AL ++CR+ +G A+++ ++P+
Sbjct: 454 CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK 513
Query: 642 DPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPR 701
D ++L+SN ++++GRW + VRE+++ G +K SWI +N+VH+F +D+SH
Sbjct: 514 DSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHIL 573
Query: 702 EKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQ 761
K+I + L L E AGY PD L+++EE +K + +HS KLA +GLL+ P
Sbjct: 574 NKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSV 633
Query: 762 PVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
P+RI KN+ CGDCHSF K+VS +REI +RD + FH F +G CSCKDYW
Sbjct: 634 PIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 264/562 (46%), Gaps = 46/562 (8%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRF-GNPLISAYLKLGHVADAYKIFYGLSSPN 63
L+ ++ + L + +HA ++K L F N LI+ Y KL H A + + N
Sbjct: 13 LKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARN 72
Query: 64 VVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHA 123
VVS+TSLISGLA+ G A+ FF MR EG+VPN+ +F A L G QIHA
Sbjct: 73 VVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHA 132
Query: 124 LIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYE 183
L VK G + VFV + +Y K D KLFDE+P ++ +WN IS+ V +
Sbjct: 133 LAVKCGRILDVFVGCSAFDMYCKTRL-RDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 184 KAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNAL 243
+A E F + +R +G + T L AC+ L G +H +R G ++SV N L
Sbjct: 192 EAIEAFIEFRRIDGHP-NSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 244 IGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYN 303
I FY KC +++ +EI IF +M KN+VS+
Sbjct: 251 IDFYGKCKQIRS----------------SEI---------------IFTEMGTKNAVSWC 279
Query: 304 ALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKF 363
+L+A Y +N + +A L+++ ++ + ++F ++SV++AC + +L IH +K
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 364 GLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAIL 423
+ + +AL+DM +CG + D+E+ F P + + S+I GYA G+ + A+
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP--EKNLVTRNSLIGGYAHQGQVDMALA 397
Query: 424 LFHQSQSEAT-VVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVA--NSMV 480
LF + P+ + S+L C G E G +I ++++ + + G + +V
Sbjct: 398 LFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIV 456
Query: 481 SMYFKCCNMSNAIKAFNKMPSHDIVS-WNGLIAGHLLHRQGDEALAVWSSMEKASIKPDA 539
M + + A + KMP +S W L +H + L ++ K K D+
Sbjct: 457 DMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPK-DS 515
Query: 540 ITFVLI----ISAYRYTNLNLV 557
VL+ +A R+ N V
Sbjct: 516 GNHVLLSNTFAAAGRWAEANTV 537
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 344/608 (56%), Gaps = 36/608 (5%)
Query: 205 ISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMP 264
+ +L C +ME +A H IRI L ++++ N LI Y+KC
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC-------------- 109
Query: 265 VMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVK 324
G+V+LA ++FD M E++ VS+N ++ Y +N EAL +F++
Sbjct: 110 -----------------GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 325 LLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGR 384
+ EG +EFT++SV++ACG+ +A +++H +K + N + ALLD+ +CG
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 385 MADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSV 444
+ DA ++F S+ W+SM+ GY ++ E A+LL+ ++Q ++ ++ L+SV
Sbjct: 213 IKDAVQVFE--SMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ-RMSLEQNQFTLSSV 269
Query: 445 LGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDI 504
+ C L GKQ+H+ K+GF S++ VA+S V MY KC ++ + F+++ ++
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 505 VSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLF 564
WN +I+G H + E + ++ M++ + P+ +TF ++S +T L V+ R+ F
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL--VEEGRRFF 387
Query: 565 LSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLN 624
M+T Y + P HY+ +V +LG G L EA E I ++PF P S+W +LL SCR+ N
Sbjct: 388 KLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKN 447
Query: 625 TTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWII 684
+ + A+ + +EP++ ++L+SN+Y+++ +W R+ +R+ +K +SWI
Sbjct: 448 LELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWID 507
Query: 685 HQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYH 744
++KVH+F V + HPR ++I S L+ L+++ K GY P LH+VE +K++ L H
Sbjct: 508 IKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQH 567
Query: 745 SAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNG 804
S KLA +GL+ P PVRI+KN+ C DCH F+K S+ TRR I +RD + FHHF +G
Sbjct: 568 SEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDG 627
Query: 805 QCSCKDYW 812
CSC D+W
Sbjct: 628 HCSCGDFW 635
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 218/411 (53%), Gaps = 45/411 (10%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
L+L + G V AKA H +I++ LE D N LI+AY K G V A ++F G+ ++
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTAC-IRLLELELGFQIHA 123
VS+ ++I + E EA+++F MR+EG +E + ++L+AC + LE ++H
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECK-KLHC 186
Query: 124 LIVKMGCVD-SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEY 182
L VK C+D +++V AL+ LY K D +++F+ + K +V+W+++++ V Y
Sbjct: 187 LSVKT-CIDLNLYVGTALLDLYAKCGMIKD-AVQVFESMQDKSSVTWSSMVAGYVQNKNY 244
Query: 183 EKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNA 242
E+A L+R +R + FT+S+++ AC+ L+EG+ +HA + G G+N+ V ++
Sbjct: 245 EEALLLYRRAQR-MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 243 LIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSY 302
+ Y KCG +++ Y+ IF ++ EKN +
Sbjct: 304 AVDMYAKCGSLRE--------------------------SYI-----IFSEVQEKNLELW 332
Query: 303 NALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF--V 360
N +++G+ K+ + E + LF K+ ++G+ E T +S+++ CG L E+ F +
Sbjct: 333 NTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCG---HTGLVEEGRRFFKL 389
Query: 361 MK--FGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
M+ +GL N + ++D+L R G +++A ++ P D S IW S++
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS-IWGSLL 439
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 149/317 (47%), Gaps = 10/317 (3%)
Query: 18 KAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKL 77
K +H +K ++ + G L+ Y K G + DA ++F + + V+++S+++G +
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 78 GREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVT 137
EEA+ L+ R + + N+ + +++ AC L L G Q+HA+I K G +VFV
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 138 NALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNG 197
++ + +Y K + + +F E+ K+ WNT+IS ++ LF M++D G
Sbjct: 302 SSAVDMYAKCGSLRESYI-IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD-G 359
Query: 198 FTVDYFTISTLLTACTGCFVLMEGRAVHA-HAIRIGLGANLSVNNALIGFYTKCGRVKDV 256
+ T S+LL+ C ++ EGR GL N+ + ++ + G + +
Sbjct: 360 MHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEA 419
Query: 257 VALLERMPVMDIITLTEIIIA----YMEFGYVDLAVE-IFDKMPEKNSVSYNALLAGYCK 311
L++ +P ++ ++A Y ++A E +F+ PE + + LL+
Sbjct: 420 YELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE--NAGNHVLLSNIYA 477
Query: 312 NGKAMEALGLFVKLLEE 328
K E + KLL +
Sbjct: 478 ANKQWEEIAKSRKLLRD 494
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 244/751 (32%), Positives = 391/751 (52%), Gaps = 78/751 (10%)
Query: 101 SFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFS------------ 148
+F +L + +L G +HAL VK S +++N + LY K
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 149 -----FCLDYLLK-------------LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFR 190
F + ++K LFDE+P DTVS+NT+IS + E A LF+
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 191 DMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKC 250
M R GF VD FT+S L+ AC L+ + +H ++ G + SVNNA + +Y+K
Sbjct: 130 RM-RKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 251 GRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPE-KNSVSYNALLAGY 309
G +++ AV +F M E ++ VS+N+++ Y
Sbjct: 187 GLLRE-------------------------------AVSVFYGMDELRDEVSWNSMIVAY 215
Query: 310 CKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND 369
++ + +AL L+ +++ +G + FTL SV+NA + Q HG ++K G N
Sbjct: 216 GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNS 275
Query: 370 CIEAALLDMLTRCGR---MADAEKMFYRWPTDRDDSIIWTSMICGYARSGK-PEHAILLF 425
+ + L+D ++CG M D+EK+F + D ++W +MI GY+ + + E A+ F
Sbjct: 276 HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP--DLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 426 HQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSD-LGVANSMVSMYF 484
Q Q PD+ + V C L KQIH A+K+ S+ + V N+++S+Y+
Sbjct: 334 RQMQRIGHR-PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYY 392
Query: 485 KCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVL 544
K N+ +A F++MP + VS+N +I G+ H G EAL ++ M + I P+ ITFV
Sbjct: 393 KSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVA 452
Query: 545 IISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMP 604
++SA + VD ++ F +MK + IEP +EHY+ ++ +LG G LEEAE I+ MP
Sbjct: 453 VLSAC--AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510
Query: 605 FQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSEL 664
++P W ALL +CR N + +R A ++ M+P Y++++N+Y+ + +W
Sbjct: 511 YKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMAS 570
Query: 665 VREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPD 724
VR+ MR K RK P SWI + K H F D SHP +++ LE ++ + K GYV D
Sbjct: 571 VRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMD 630
Query: 725 TSFVLHEVEEHQKKDF---LFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKY 781
+ + + +E + D L +HS KLA +GL++T G+ + +VKN+ CGDCH+ +K+
Sbjct: 631 KKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKF 690
Query: 782 VSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
+S V REI +RD FH F +G+CSC DYW
Sbjct: 691 MSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 148/588 (25%), Positives = 256/588 (43%), Gaps = 78/588 (13%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F + L SV ++ K++HA +K ++ T N ++ Y K G ++ A FY
Sbjct: 11 FRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTE 70
Query: 61 SPNV-------------------------------VSFTSLISGLAKLGREEEAIELFFR 89
PNV VS+ +LISG A A+ LF R
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 90 MRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSF 149
MR G + + ++ AC ++L Q+H V G V NA + Y K
Sbjct: 131 MRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 150 CLDYLLKLF--DELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTIST 207
+ + + DEL +D VSWN++I + E KA L+++M GF +D FT+++
Sbjct: 189 LREAVSVFYGMDEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMIF-KGFKIDMFTLAS 245
Query: 208 LLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMD 267
+L A T L+ GR H I+ G N V + LI FY+KCG
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD------------- 292
Query: 268 IITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGK-AMEALGLFVKLL 326
G D + ++F ++ + V +N +++GY N + + EA+ F ++
Sbjct: 293 --------------GMYD-SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQ 337
Query: 327 EEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND-CIEAALLDMLTRCGRM 385
G + + V +AC + +QIHG +K + SN + AL+ + + G +
Sbjct: 338 RIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNL 397
Query: 386 ADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVL 445
DA +F R P +++ + MI GYA+ G A+LL+ Q ++ + P++I +VL
Sbjct: 398 QDARWVFDRMP--ELNAVSFNCMIKGYAQHGHGTEALLLY-QRMLDSGIAPNKITFVAVL 454
Query: 446 GVCGTLGFHEMGKQIHSYALKTGFSSDLGVA--NSMVSMYFKCCNMSNAIKAFNKMP-SH 502
C G + G++ + +K F + + M+ + + + A + + MP
Sbjct: 455 SACAHCGKVDEGQEYFN-TMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKP 513
Query: 503 DIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAIT-FVLIISAY 549
V+W L+ H+ + ALA ++ E ++P A T +V++ + Y
Sbjct: 514 GSVAWAALLGACRKHK--NMALAERAANELMVMQPLAATPYVMLANMY 559
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/618 (33%), Positives = 339/618 (54%), Gaps = 38/618 (6%)
Query: 197 GFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDV 256
G + + LL AC L +G+ VHAH I+ + L+ FY KC ++D
Sbjct: 47 GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLED- 105
Query: 257 VALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAM 316
A ++ D+MPEKN VS+ A+++ Y + G +
Sbjct: 106 ------------------------------ARKVLDEMPEKNVVSWTAMISRYSQTGHSS 135
Query: 317 EALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALL 376
EAL +F +++ EFT +V+ +C L +QIHG ++K+ S+ + ++LL
Sbjct: 136 EALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLL 195
Query: 377 DMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVP 436
DM + G++ +A ++F P D + T++I GYA+ G E A+ +FH+ SE + P
Sbjct: 196 DMYAKAGQIKEAREIFECLP--ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG-MSP 252
Query: 437 DEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAF 496
+ + S+L L + GKQ H + L+ + NS++ MY KC N+S A + F
Sbjct: 253 NYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF 312
Query: 497 NKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSM-EKASIKPDAITFVLIISAYRYTNLN 555
+ MP +SWN ++ G+ H G E L ++ M ++ +KPDA+T + ++S + +
Sbjct: 313 DNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRME 372
Query: 556 LVDSCRKLFLSM-KTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRA 614
D+ +F M Y +P +EHY +V +LG G ++EA E I MP +P V +
Sbjct: 373 --DTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGS 430
Query: 615 LLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGF 674
LL +CR+ L+ IG+ V + ++ +EP++ Y+++SNLY+S+GRW + VR M +K
Sbjct: 431 LLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAV 490
Query: 675 RKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEE 734
K P RSWI H+ +H F+ D++HPR +++ + ++ + ++ +AGYVPD S VL++V+E
Sbjct: 491 TKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDE 550
Query: 735 HQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRD 794
QK+ L HS KLA T+GL+ T G P+R+ KN+ C DCH+F K S V RE+ LRD
Sbjct: 551 EQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRD 610
Query: 795 ASGFHHFLNGQCSCKDYW 812
+ FH ++G CSC DYW
Sbjct: 611 KNRFHQIVDGICSCGDYW 628
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 187/385 (48%), Gaps = 38/385 (9%)
Query: 17 AKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAK 76
+ +HA +IK T L+ Y K + DA K+ + NVVS+T++IS ++
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 77 LGREEEAIELFFRM-RSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVF 135
G EA+ +F M RS+G PNE +F +LT+CIR L LG QIH LIVK +F
Sbjct: 131 TGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 136 VTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRD 195
V ++L+ +Y K + + ++F+ LP +D VS +I+ E+A E+F + +
Sbjct: 190 VGSSLLDMYAK-AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 196 NGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKD 255
G + +Y T ++LLTA +G +L G+ H H +R L + N+LI Y+KCG +
Sbjct: 249 -GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSY 307
Query: 256 VVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKA 315
L + MP E+ ++S+NA+L GY K+G
Sbjct: 308 ARRLFDNMP-------------------------------ERTAISWNAMLVGYSKHGLG 336
Query: 316 MEALGLFVKLLEEGLVLTE-FTLTSVVNAC--GLIMEAKLSEQIHGFVMKFGLGSNDCIE 372
E L LF + +E V + TL +V++ C G + + L+ ++G
Sbjct: 337 REVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHY 396
Query: 373 AALLDMLTRCGRMADAEKMFYRWPT 397
++DML R GR+ +A + R P+
Sbjct: 397 GCIVDMLGRAGRIDEAFEFIKRMPS 421
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/510 (26%), Positives = 228/510 (44%), Gaps = 54/510 (10%)
Query: 60 SSP-NVVSFTSL-ISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELEL 117
SSP N V T L IS L GR +EA+ M G H + A+L AC+ L
Sbjct: 14 SSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRD 70
Query: 118 GFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVV 177
G ++HA ++K + + ++ L+ YGK CL+ K+ DE+P K+ VSW +IS
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCD-CLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 178 NEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANL 237
+A +F +M R +G + FT +T+LT+C L G+ +H ++ +++
Sbjct: 130 QTGHSSEALTVFAEMMRSDG-KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 238 SVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEK 297
V ++L+ Y K G++K+ + E +P D+++ T II Y + G + A+E+F ++ +
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 298 ----NSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLS 353
N V+Y +LL A+ L LL+ G
Sbjct: 249 GMSPNYVTYASLLT-------ALSGLA----LLDHG------------------------ 273
Query: 354 EQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYA 413
+Q H V++ L ++ +L+DM ++CG ++ A ++F P +I W +M+ GY+
Sbjct: 274 KQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP--ERTAISWNAMLVGYS 331
Query: 414 RSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDL 473
+ G + LF + E V PD + L +VL C + G I + + +
Sbjct: 332 KHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKP 391
Query: 474 GVAN--SMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAG----HLLHRQGDEALAVW 527
G + +V M + + A + +MPS G + G HL G+
Sbjct: 392 GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRL 451
Query: 528 SSMEKASIKPDAITFVLIISAYRYTNLNLV 557
+E + I L SA R+ ++N V
Sbjct: 452 IEIEPENAGNYVILSNLYASAGRWADVNNV 481
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
F L ++ + L K IH ++K + G+ L+ Y K G + +A +IF L
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQ 120
+VVS T++I+G A+LG +EEA+E+F R+ SEG+ PN ++ ++LTA L L+ G Q
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 121 IHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEF 180
H +++ + N+L+ +Y K L Y +LFD +P + +SWN ++
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGN-LSYARRLFDNMPERTAISWNAMLVGYSKHG 334
Query: 181 EYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVN 240
+ ELFR M+ + D T+ +L+ C+ + G + + G
Sbjct: 335 LGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTE 394
Query: 241 N--ALIGFYTKCGRVKDVVALLERMP 264
+ ++ + GR+ + ++RMP
Sbjct: 395 HYGCIVDMLGRAGRIDEAFEFIKRMP 420
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 332/610 (54%), Gaps = 6/610 (0%)
Query: 204 TISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERM 263
T L+ C+ L EG+ VH H G + + N L+ Y KCG + D + + M
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 264 PVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFV 323
P D+ + ++ Y E G ++ A ++FD+M EK+S S+ A++ GY K + EAL L+
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 324 KLLE-EGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRC 382
+ FT++ V A + + ++IHG +++ GL S++ + ++L+DM +C
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 383 GRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALT 442
G + +A +F + D + WTSMI Y +S + LF + P+E
Sbjct: 267 GCIDEARNIFDK--IVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCER-PNEYTFA 323
Query: 443 SVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSH 502
VL C L E+GKQ+H Y + GF ++S+V MY KC N+ +A + P
Sbjct: 324 GVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP 383
Query: 503 DIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRK 562
D+VSW LI G + Q DEAL + + K+ KPD +TFV ++SA T+ LV+ +
Sbjct: 384 DLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC--THAGLVEKGLE 441
Query: 563 LFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIR 622
F S+ + + TS+HY LV +L G E+ + I+ MP +P +W ++L C
Sbjct: 442 FFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY 501
Query: 623 LNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSW 682
N + + A+ + +EP++P TY+ ++N+Y+++G+W +R+ M+E G K P SW
Sbjct: 502 GNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 683 IIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLF 742
+ K H F D SHP I L L + + GYVP TS VLH+VE+ QK++ L
Sbjct: 562 TEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLV 621
Query: 743 YHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFL 802
YHS KLA + +L+T G +++ KN+ +C DCH +K++S +T+R+I +RD++ FH F
Sbjct: 622 YHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFE 681
Query: 803 NGQCSCKDYW 812
NGQCSC DYW
Sbjct: 682 NGQCSCGDYW 691
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 211/501 (42%), Gaps = 73/501 (14%)
Query: 82 EAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALM 141
EA++L R + P ++ ++ C + LE G ++H I G V + + N L+
Sbjct: 72 EAVQLLGRAKK----PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLL 127
Query: 142 GLYGKF----------------SFC--------------LDYLLKLFDELPHKDTVSWNT 171
+Y K C L+ KLFDE+ KD+ SW
Sbjct: 128 RMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTA 187
Query: 172 VISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRI 231
+++ V + + E+A L+ M+R + FT+S + A + G+ +H H +R
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 232 GLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIF 291
GL ++ + ++L+ Y KCG + + + +++ D+++ T +I Y
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF------------ 295
Query: 292 DKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAK 351
K+ + E LF +L+ E+T V+NAC + +
Sbjct: 296 -------------------KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEE 336
Query: 352 LSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICG 411
L +Q+HG++ + G ++L+DM T+CG + A+ + P + D + WTS+I G
Sbjct: 337 LGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP--KPDLVSWTSLIGG 394
Query: 412 YARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQ-IHSYALKTGFS 470
A++G+P+ A+ F T PD + +VL C G E G + +S K S
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGT-KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLS 453
Query: 471 SDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQGDEALAVWSS 529
+V + + ++MP W ++ G + G+ LA ++
Sbjct: 454 HTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTY--GNIDLAEEAA 511
Query: 530 MEKASIKPD-AITFVLIISAY 549
E I+P+ +T+V + + Y
Sbjct: 512 QELFKIEPENPVTYVTMANIY 532
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 175/423 (41%), Gaps = 87/423 (20%)
Query: 37 NPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV 96
N L+ Y K G + DA K+F + + ++ S+ +++G A++G EEA +LF M +
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK--- 180
Query: 97 PNEHSFVAILTACIRLLELE------------------------------------LGFQ 120
+ +S+ A++T ++ + E G +
Sbjct: 181 -DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 121 IHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEF 180
IH IV+ G + ++LM +YGK C+D +FD++ KD VSW ++I
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCG-CIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 181 EYEKAFELFRDM----KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGAN 236
+ + F LF ++ +R N +T + +L AC G+ VH + R+G
Sbjct: 299 RWREGFSLFSELVGSCERPN-----EYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 237 LSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPE 296
+++L+ YTKCG ++ +++ P D+++ T +I
Sbjct: 354 SFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLI--------------------- 392
Query: 297 KNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEAKLS 353
G +NG+ EAL F LL+ G T +V++AC GL+ K
Sbjct: 393 ----------GGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV--EKGL 440
Query: 354 EQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYA 413
E + K L L+D+L R GR + + P + +W S++ G +
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPM-KPSKFLWASVLGGCS 499
Query: 414 RSG 416
G
Sbjct: 500 TYG 502
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 9/324 (2%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
+ K IH +++ L+ D + L+ Y K G + +A IF + +VVS+TS+I
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDR 293
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDS 133
K R E LF + PNE++F +L AC L ELG Q+H + ++G
Sbjct: 294 YFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY 353
Query: 134 VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMK 193
F +++L+ +Y K ++ + D P D VSW ++I + ++A + F D+
Sbjct: 354 SFASSSLVDMYTKCGN-IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYF-DLL 411
Query: 194 RDNGFTVDYFTISTLLTACTGCFVLMEG-RAVHAHAIRIGLGANLSVNNALIGFYTKCGR 252
+G D+ T +L+ACT ++ +G ++ + L L+ + GR
Sbjct: 412 LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGR 471
Query: 253 VKDVVALLERMPVMDIITL-TEIIIAYMEFGYVDL----AVEIFDKMPEKNSVSYNALLA 307
+ + +++ MP+ L ++ +G +DL A E+F PE N V+Y +
Sbjct: 472 FEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE-NPVTYVTMAN 530
Query: 308 GYCKNGKAMEALGLFVKLLEEGLV 331
Y GK E + ++ E G+
Sbjct: 531 IYAAAGKWEEEGKMRKRMQEIGVT 554
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 33/204 (16%)
Query: 356 IHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARS 415
+HGF++K L S A+L R +D K F+ P D ++ +C R
Sbjct: 12 LHGFILKRNLSS---FHASL-------KRFSD--KKFFN-PNHEDGGVV-VERLCRANRF 57
Query: 416 GKP----------EHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYAL 465
G+ A+ L +++ P +++ VC E GK++H +
Sbjct: 58 GEAIDVLCGQKLLREAVQLLGRAKK-----PPASTYCNLIQVCSQTRALEEGKKVHEHIR 112
Query: 466 KTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALA 525
+GF + + N ++ MY KC ++ +A K F++MP+ D+ SWN ++ G+ +EA
Sbjct: 113 TSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARK 172
Query: 526 VWSSMEKASIKPDAITFVLIISAY 549
++ M + D+ ++ +++ Y
Sbjct: 173 LFDEM----TEKDSYSWTAMVTGY 192
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/693 (31%), Positives = 356/693 (51%), Gaps = 38/693 (5%)
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
QIH ++ F+ N L+ F Y LF + +N++I+ VN
Sbjct: 31 QIHVSLINHHLHHDTFLVNLLLK-RTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
+ + +LF + R +G + FT +L ACT G +H+ ++ G +++
Sbjct: 90 HLFHETLDLFLSI-RKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
+L+ Y+ GR+ D A ++FD++P+++
Sbjct: 149 MTSLLSIYSGSGRLND-------------------------------AHKLFDEIPDRSV 177
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
V++ AL +GY +G+ EA+ LF K++E G+ + + V++AC + + E I +
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
+ + + N + L+++ +CG+M A +F D + W++MI GYA + P+
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMV--EKDIVTWSTMIQGYASNSFPK 295
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSM 479
I LF Q E + PD+ ++ L C +LG ++G+ S + F ++L +AN++
Sbjct: 296 EGIELFLQMLQE-NLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 480 VSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDA 539
+ MY KC M+ + F +M DIV N I+G + + AV+ EK I PD
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDG 414
Query: 540 ITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEET 599
TF+ ++ + L + + F ++ +Y ++ T EHY +V + G G L++A
Sbjct: 415 STFLGLLCGCVHAGL--IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 600 INNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRW 659
I +MP +P VW ALL CR+ +T + + V K ++A+EP + Y+ +SN+YS GRW
Sbjct: 473 ICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRW 532
Query: 660 HNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKA 719
+ VR+ M +KG +K P SWI + KVH F DKSHP IY+ LE L E
Sbjct: 533 DEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLM 592
Query: 720 GYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFL 779
G+VP T FV +VEE +K+ L YHS KLA GL++T GQ +R+VKN+ CGDCH +
Sbjct: 593 GFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVM 652
Query: 780 KYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
K +S +TRREI +RD + FH F NG CSC DYW
Sbjct: 653 KLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 221/513 (43%), Gaps = 47/513 (9%)
Query: 7 LSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVS 66
+SV C V+ K IH SLI L DT N L+ L +Y +F PN+
Sbjct: 20 ISVAC-TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFL 78
Query: 67 FTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIV 126
+ SLI+G E ++LF +R G+ + +F +L AC R +LG +H+L+V
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 127 KMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAF 186
K G V +L+ +Y S L+ KLFDE+P + V+W + S + +A
Sbjct: 139 KCGFNHDVAAMTSLLSIYSG-SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 187 ELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGF 246
+LF+ M + G D + I +L+AC L G + + + + N V L+
Sbjct: 198 DLFKKMV-EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL 256
Query: 247 YTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALL 306
Y KCG+++ ++ + M DI+T + +I Y
Sbjct: 257 YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY---------------------------- 288
Query: 307 AGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLG 366
N E + LF+++L+E L +F++ +++C + L E + +
Sbjct: 289 ---ASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL 345
Query: 367 SNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFH 426
+N + AL+DM +CG MA ++F D +I + I G A++G + + +F
Sbjct: 346 TNLFMANALIDMYAKCGAMARGFEVFKE--MKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 427 QSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHS-----YALKTGFSSDLGVANSMVS 481
Q++ + + PD +L C G + G + + YALK MV
Sbjct: 404 QTE-KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEH----YGCMVD 458
Query: 482 MYFKCCNMSNAIKAFNKMPSH-DIVSWNGLIAG 513
++ + + +A + MP + + W L++G
Sbjct: 459 LWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 195/449 (43%), Gaps = 67/449 (14%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
L+ + L +H+ ++K D L+S Y G + DA+K+F + +V
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
V++T+L SG GR EAI+LF +M G+ P+ + V +L+AC+ + +L+ G I
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKY 237
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
+ +M + FV L+ LY K ++ +FD + KD V+W+T+I + ++
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCG-KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 185 AFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALI 244
ELF M ++N D F+I L++C L G + R NL + NALI
Sbjct: 297 GIELFLQMLQEN-LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355
Query: 245 GFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNA 304
Y KCG M G+ E+F +M EK+ V NA
Sbjct: 356 DMYAKCGA--------------------------MARGF-----EVFKEMKEKDIVIMNA 384
Query: 305 LLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFG 364
++G KNG + +F + + G+ T ++ C +H +++ G
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC-----------VHAGLIQDG 433
Query: 365 L---GSNDCIEA---------ALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGY 412
L + C+ A ++D+ R G + DA ++ P R ++I+W +++ G
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM-RPNAIVWGALLSG- 491
Query: 413 ARSGKPEHAILLFHQSQSEATVVPDEIAL 441
L +Q TV+ + IAL
Sbjct: 492 ---------CRLVKDTQLAETVLKELIAL 511
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/764 (29%), Positives = 395/764 (51%), Gaps = 43/764 (5%)
Query: 51 DAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACI 110
DA ++F ++ + + +I G G EA++ + RM G+ + ++ ++ +
Sbjct: 82 DALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVA 141
Query: 111 RLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWN 170
+ LE G +IHA+++K+G V V+V N+L+ LY K D K+F+E+P +D VSWN
Sbjct: 142 GISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD-AEKVFEEMPERDIVSWN 200
Query: 171 TVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIR 230
++IS + + + LF++M + GF D F+ + L AC+ + G+ +H HA+R
Sbjct: 201 SMISGYLALGDGFSSLMLFKEMLK-CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 231 IGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEI 290
R+ D++ +T I+ Y ++G V A I
Sbjct: 260 ------------------------------SRIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 291 FDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEA 350
F+ M ++N V++N ++ Y +NG+ +A F K+ E+ + + + + I+E
Sbjct: 290 FNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEG 349
Query: 351 KLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMIC 410
+ IHG+ M+ G + +E AL+DM CG++ AE +F R + I W S+I
Sbjct: 350 R---TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA--EKNVISWNSIIA 404
Query: 411 GYARSGKPEHAILLFHQSQSEATVVPDEIALTSVL-GVCGTLGFHEMGKQIHSYALKTGF 469
Y ++GK A+ LF Q ++++VPD + S+L +L E G++IH+Y +K+ +
Sbjct: 405 AYVQNGKNYSALELF-QELWDSSLVPDSTTIASILPAYAESLSLSE-GREIHAYIVKSRY 462
Query: 470 SSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSS 529
S+ + NS+V MY C ++ +A K FN + D+VSWN +I + +H G ++ ++S
Sbjct: 463 WSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSE 522
Query: 530 MEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGY 589
M + + P+ TF +++A + + VD + F SMK Y I+P EHY ++ ++G
Sbjct: 523 MIASRVNPNKSTFASLLAACSISGM--VDEGWEYFESMKREYGIDPGIEHYGCMLDLIGR 580
Query: 590 WGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILV 649
G A+ + MPF P +W +LL++ R + TI + A+ I ME + Y+L+
Sbjct: 581 TGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLL 640
Query: 650 SNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGL 709
N+Y+ +GRW + ++ M KG + SRS + + K H F D+SH IY L
Sbjct: 641 LNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
Query: 710 EILILECLKAG-YVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKN 768
+++ + YV S + E + + HS +LA +GL++T G+ V + N
Sbjct: 701 DVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNN 760
Query: 769 ILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
C CH FL+ S +TRREI + D+ FHHF NG+CSC +YW
Sbjct: 761 TRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 150/563 (26%), Positives = 254/563 (45%), Gaps = 55/563 (9%)
Query: 17 AKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAK 76
K IHA +IKL D N LIS Y+KLG DA K+F + ++VS+ S+ISG
Sbjct: 149 GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 77 LGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGC-VDSVF 135
LG ++ LF M G P+ S ++ L AC + ++G +IH V+ V
Sbjct: 209 LGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVM 268
Query: 136 VTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRD 195
V +++ +Y K+ + Y ++F+ + ++ V+WN +I AF F+ M
Sbjct: 269 VMTSILDMYSKYGE-VSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQ 327
Query: 196 NGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKD 255
NG D T LL A ++EGR +H +A+R G ++ + ALI Y +CG++K
Sbjct: 328 NGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 256 VVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKA 315
+ +RM ++I+ II AY++ NGK
Sbjct: 384 AEVIFDRMAEKNVISWNSIIAAYVQ-------------------------------NGKN 412
Query: 316 MEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAAL 375
AL LF +L + LV T+ S++ A + +IH +++K SN I +L
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 376 LDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVV 435
+ M CG + DA K F D + W S+I YA G ++ LF + + + V
Sbjct: 473 VHMYAMCGDLEDARKCFNHILL--KDVVSWNSIIMAYAVHGFGRISVWLFSEMIA-SRVN 529
Query: 436 PDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVAN--SMVSMYFKCCNMSNAI 493
P++ S+L C G + G + ++K + D G+ + M+ + + N S A
Sbjct: 530 PNKSTFASLLAACSISGMVDEGWEYFE-SMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 494 KAFNKMPSHDIVS-WNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAI-TFVLIISAY-- 549
+ +MP W L+ H+ D +A +++ + ++ D +VL+++ Y
Sbjct: 589 RFLEEMPFVPTARIWGSLLNASRNHK--DITIAEFAAEQIFKMEHDNTGCYVLLLNMYAE 646
Query: 550 --RYTNLNLVDSCRKLFLSMKTI 570
R+ ++N + KL + K I
Sbjct: 647 AGRWEDVNRI----KLLMESKGI 665
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 146/280 (52%), Gaps = 5/280 (1%)
Query: 271 LTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGL 330
LT + + + ++ A+++FD+M + ++ +N ++ G+ G +EA+ + +++ G+
Sbjct: 67 LTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGV 126
Query: 331 VLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEK 390
FT V+ + I + ++IH V+K G S+ + +L+ + + G DAEK
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 391 MFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGT 450
+F P D + W SMI GY G +++LF + + PD + S LG C
Sbjct: 187 VFEEMP--ERDIVSWNSMISGYLALGDGFSSLMLFKE-MLKCGFKPDRFSTMSALGACSH 243
Query: 451 LGFHEMGKQIHSYALKTGF-SSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNG 509
+ +MGK+IH +A+++ + D+ V S++ MY K +S A + FN M +IV+WN
Sbjct: 244 VYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNV 303
Query: 510 LIAGHLLHRQGDEALAVWSSM-EKASIKPDAITFVLIISA 548
+I + + + +A + M E+ ++PD IT + ++ A
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA 343
Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 48/224 (21%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
+S + IHA ++K +T N L+ Y G + DA K F + +VVS+ S+I
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQ----------IHA 123
A G ++ LF M + + PN+ +F ++L AC ++ G++ I
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 566
Query: 124 LIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVS-WNTVISSVVN---- 178
I GC+ L+G G FS +L +E+P T W +++++ N
Sbjct: 567 GIEHYGCMLD------LIGRTGNFSAAKRFL----EEMPFVPTARIWGSLLNASRNHKDI 616
Query: 179 ---EFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLM 219
EF E+ F+ M+ DN TGC+VL+
Sbjct: 617 TIAEFAAEQIFK----MEHDN----------------TGCYVLL 640
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/714 (33%), Positives = 385/714 (53%), Gaps = 35/714 (4%)
Query: 107 TACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDY-LLKLFDELPHKD 165
TA +R+ L +IH DS +++ + G F+ + KLFDE+P ++
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 166 TVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVH 225
+SWN ++S + E ++A ++F M N + TA +V G+
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS---------WTALVKGYV-HNGKVDV 128
Query: 226 AHAI--RIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGY 283
A ++ ++ +S LIGF GR+ D L E +P D I T +I + G
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQD-GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGR 187
Query: 284 VDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNA 343
VD A EIFD+M E++ +++ ++ GY +N + +A +F + E+ TE + TS++
Sbjct: 188 VDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML-- 241
Query: 344 CGLIMEAKLSEQIHGF---VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRD 400
G + ++ + F +K + N A++ L + G +A A ++F D
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVKPVIACN-----AMISGLGQKGEIAKARRVFDSMKERND 296
Query: 401 DSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQI 460
S W ++I + R+G A+ LF Q + V P L S+L VC +L GKQ+
Sbjct: 297 AS--WQTVIKIHERNGFELEALDLFILMQKQG-VRPTFPTLISILSVCASLASLHHGKQV 353
Query: 461 HSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQG 520
H+ ++ F D+ VA+ +++MY KC + + F++ PS DI+ WN +I+G+ H G
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 521 DEALAVWSSME-KASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEH 579
+EAL V+ M S KP+ +TFV +SA Y + V+ K++ SM++++ ++P + H
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM--VEEGLKIYESMESVFGVKPITAH 471
Query: 580 YASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAME 639
YA +V +LG G EA E I++M +P +VW +LL +CR + + AK ++ +E
Sbjct: 472 YACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Query: 640 PQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRD-KS 698
P++ TYIL+SN+Y+S GRW + +R+ M+ + RK P SW +NKVH+F S
Sbjct: 532 PENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINS 591
Query: 699 HPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTP 758
HP ++ I L+ L +AGY PD S+ LH+V+E +K + L YHS +LA Y LL
Sbjct: 592 HPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLS 651
Query: 759 AGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
G P+R++KN+ C DCH+ +K +S V REI LRDA+ FHHF NG+CSCKDYW
Sbjct: 652 EGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/517 (24%), Positives = 247/517 (47%), Gaps = 27/517 (5%)
Query: 37 NPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV 96
N +++ Y DA K+F + N++S+ L+SG K G +EA ++F M +V
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 97 PNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLK 156
S+ A++ + ++++ +L KM + V T L+G +D K
Sbjct: 112 ----SWTALVKGYVHNGKVDVA---ESLFWKMPEKNKVSWTVMLIGFLQDGR--IDDACK 162
Query: 157 LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCF 216
L++ +P KD ++ ++I + E ++A E+F +M + T +T++T
Sbjct: 163 LYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS-----VITWTTMVTGYGQNN 217
Query: 217 VLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIII 276
+ + R + + +S + L+G Y + GR++D L E MPV +I +I
Sbjct: 218 RVDDARKIFD---VMPEKTEVSWTSMLMG-YVQNGRIEDAEELFEVMPVKPVIACNAMIS 273
Query: 277 AYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFT 336
+ G + A +FD M E+N S+ ++ + +NG +EAL LF+ + ++G+ T T
Sbjct: 274 GLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Query: 337 LTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWP 396
L S+++ C + +Q+H +++ + + + L+ M +CG + ++ +F R+P
Sbjct: 334 LISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP 393
Query: 397 TDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEM 456
+ D I+W S+I GYA G E A+ +F + + P+E+ + L C G E
Sbjct: 394 S--KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 457 GKQIHSYALKTGFSSDLGVAN--SMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAG 513
G +I+ ++++ F A+ MV M + + A++ + M D W L+
Sbjct: 452 GLKIYE-SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Query: 514 HLLHRQGDEALAVWSSMEKASIKPD-AITFVLIISAY 549
H Q D +A + + + I+P+ + T++L+ + Y
Sbjct: 511 CRTHSQLD--VAEFCAKKLIEIEPENSGTYILLSNMY 545
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 141/300 (47%), Gaps = 7/300 (2%)
Query: 37 NPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV 96
N +IS + G +A A ++F + N S+ ++I + G E EA++LF M+ +G+
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 97 PNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLK 156
P + ++IL+ C L L G Q+HA +V+ V+V + LM +Y K + L
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL- 387
Query: 157 LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCF 216
+FD P KD + WN++IS + E+A ++F +M + T L+AC+
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 217 VLMEGRAVHAHAIRI-GLGANLSVNNALIGFYTKCGRVKDVVALLERMPVM-DIITLTEI 274
++ EG ++ + G+ + ++ + GR + + +++ M V D +
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 275 IIAYMEFGYVDLAVEIFDKMPE---KNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
+ A +D+A K+ E +NS +Y L Y G+ + L KL++ LV
Sbjct: 508 LGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELR-KLMKTRLV 566
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 8/164 (4%)
Query: 17 AKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAK 76
K +HA L++ + D + L++ Y+K G + + IF S +++ + S+ISG A
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 77 LGREEEAIELFFRMRSEGIV-PNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVF 135
G EEA+++F M G PNE +FVA L+AC +E G +I+ + + V +
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPIT 469
Query: 136 VTNALM----GLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISS 175
A M G G+F+ ++ + + E D W +++ +
Sbjct: 470 AHYACMVDMLGRAGRFNEAMEMIDSMTVE---PDAAVWGSLLGA 510
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/802 (29%), Positives = 400/802 (49%), Gaps = 59/802 (7%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
++S +H S+IK E ++ G+ L Y K G +A ++F L + + +S+T +IS
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 73 GLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVD 132
L + EA++ + M G+ PNE +FV +L A L LE G IH+ I+ G
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGAS-SFLGLEFGKTIHSNIIVRGIPL 257
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
+V + +L+ Y +FS D +++ + +D W +V+S V ++A F +M
Sbjct: 258 NVVLKTSLVDFYSQFSKMED-AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGR 252
R G + FT S +L+ C+ L G+ +H+ I++G + V NAL+ Y KC
Sbjct: 317 -RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKC-- 373
Query: 253 VKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKN 312
+ +E+ A +F M N VS+ L+ G +
Sbjct: 374 -----------------SASEV-----------EASRVFGAMVSPNVVSWTTLILGLVDH 405
Query: 313 GKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIE 372
G + GL +++++ + TL+ V+ AC + + +IH ++++ + +
Sbjct: 406 GFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVG 465
Query: 373 AALLDMLTRCGRMADAEKMFYRW----PTDRDDSIIWTSMICGYARSGKPEHAILLFHQS 428
+L+D A + K+ Y W R D+I +TS++ + GK E A+ + +
Sbjct: 466 NSLVDAY------ASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM 519
Query: 429 QSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCN 488
+ + D+++L + LG E GK +H Y++K+GFS V NS+V MY KC +
Sbjct: 520 YGDG-IRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGS 578
Query: 489 MSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISA 548
+ +A K F ++ + D+VSWNGL++G + AL+ + M +PD++TF++++SA
Sbjct: 579 LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSA 638
Query: 549 YRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPK 608
+N L D + F MK IYNIEP EHY LV +LG G LEEA + M +P
Sbjct: 639 C--SNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPN 696
Query: 609 VSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVRED 668
+++ LL +CR R N ++G+ +A LA+ P DPA YIL+++LY SG+ ++ R
Sbjct: 697 AMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNL 756
Query: 669 MREKGFRKHPSRSWIIHQNKVHSFYVRDKSH-PREKDIYSGLEILILECLKAGYVPDTSF 727
M EK K +S + Q KVHSF D + + IY+ +E + E + G
Sbjct: 757 MTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG------- 809
Query: 728 VLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTR 787
++ + +HSAK A YG + PV +VKN + C DCH F+ ++ +
Sbjct: 810 -----SPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVD 864
Query: 788 REIFLRDASGFHHFLNGQCSCK 809
++I +RD + H F NG+CSCK
Sbjct: 865 KKITVRDGNQVHIFKNGECSCK 886
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 151/603 (25%), Positives = 283/603 (46%), Gaps = 52/603 (8%)
Query: 20 IHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGR 79
IH +IK L ++ N L+S YLK + +A K+F +S V ++T +IS K
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 80 EEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNA 139
A+ LF M + G PNE +F +++ +C L ++ G ++H ++K G + V ++
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 140 LMGLYGKFSFCLDY--LLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNG 197
L LY K C + +LF L + DT+SW +ISS+V ++ +A + + +M + G
Sbjct: 165 LSDLYSK---CGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA-G 220
Query: 198 FTVDYFTISTLLTACTGCFVLME-GRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDV 256
+ FT LL A + F+ +E G+ +H++ I G+ N+ + +L+ FY++ +++D
Sbjct: 221 VPPNEFTFVKLLGASS--FLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMED- 277
Query: 257 VALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAM 316
AV + + E++ + ++++G+ +N +A
Sbjct: 278 ------------------------------AVRVLNSSGEQDVFLWTSVVSGFVRNLRAK 307
Query: 317 EALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALL 376
EA+G F+++ GL FT +++++ C + +QIH +K G + + AL+
Sbjct: 308 EAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALV 367
Query: 377 DMLTRC-GRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAI-LLFHQSQSEATV 434
DM +C +A ++F + + + WT++I G G + LL + E V
Sbjct: 368 DMYMKCSASEVEASRVFGAMVS--PNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE--V 423
Query: 435 VPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIK 494
P+ + L+ VL C L +IH+Y L+ ++ V NS+V Y + A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWN 483
Query: 495 AFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNL 554
M D +++ L+ + + AL+V + M I+ D ++ ISA NL
Sbjct: 484 VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA--SANL 541
Query: 555 NLVDSCRKLF-LSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWR 613
+++ + L S+K+ ++ + SLV + G LE+A++ + P V W
Sbjct: 542 GALETGKHLHCYSVKSGFS--GAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWN 598
Query: 614 ALL 616
L+
Sbjct: 599 GLV 601
Score = 172 bits (436), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 212/448 (47%), Gaps = 44/448 (9%)
Query: 108 ACIRLLEL------ELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDEL 161
+CIR+L +G IH ++K G ++++ + N L+ LY K + KLFDE+
Sbjct: 26 SCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWN-ARKLFDEM 84
Query: 162 PHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEG 221
H+ +W +IS+ E+ A LF +M +G + FT S+++ +C G + G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMA-SGTHPNEFTFSSVVRSCAGLRDISYG 143
Query: 222 RAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEF 281
VH I+ G N V ++L Y+KCG+ K+
Sbjct: 144 GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKE-------------------------- 177
Query: 282 GYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVV 341
A E+F + +++S+ +++ K EAL + ++++ G+ EFT ++
Sbjct: 178 -----ACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL 232
Query: 342 NACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDD 401
A + + + IH ++ G+ N ++ +L+D ++ +M DA ++ + D
Sbjct: 233 GASSF-LGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN--SSGEQD 289
Query: 402 SIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIH 461
+WTS++ G+ R+ + + A+ F + +S + P+ +++L +C + + GKQIH
Sbjct: 290 VFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LQPNNFTYSAILSLCSAVRSLDFGKQIH 348
Query: 462 SYALKTGFSSDLGVANSMVSMYFKC-CNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQG 520
S +K GF V N++V MY KC + A + F M S ++VSW LI G + H
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFV 408
Query: 521 DEALAVWSSMEKASIKPDAITFVLIISA 548
+ + M K ++P+ +T ++ A
Sbjct: 409 QDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 10/295 (3%)
Query: 350 AKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
+++ IH V+KFGL N + LL + + + +A K+F WT MI
Sbjct: 39 SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDE--MSHRTVFAWTVMI 96
Query: 410 CGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGF 469
+ +S + A+ LF + + T P+E +SV+ C L G ++H +KTGF
Sbjct: 97 SAFTKSQEFASALSLFEEMMASGTH-PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGF 155
Query: 470 SSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSS 529
+ V +S+ +Y KC A + F+ + + D +SW +I+ + R+ EAL +S
Sbjct: 156 EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSE 215
Query: 530 MEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGY 589
M KA + P+ TFV ++ A + L + + N+ + SLV
Sbjct: 216 MVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKT----SLVDFYSQ 271
Query: 590 WGFLEEAEETINNMPFQPKVSVWRALLDSC--RIRLNTTIGKRVAKHILAMEPQD 642
+ +E+A +N+ Q V +W +++ +R +G + L ++P +
Sbjct: 272 FSKMEDAVRVLNSSGEQ-DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNN 325
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 235/740 (31%), Positives = 385/740 (52%), Gaps = 73/740 (9%)
Query: 95 IVPNE-HSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDY 153
++PN+ + V+IL C R + G Q+H ++K G ++ +N L+ +Y K C +
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCK---CREP 57
Query: 154 LL--KLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTA 211
L+ K+FD +P ++ VSW+ ++S V + + + LF +M R G + FT ST L A
Sbjct: 58 LMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR-QGIYPNEFTFSTNLKA 116
Query: 212 CTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITL 271
C L +G +H ++IG + V N+L+ Y+KCGR+ +
Sbjct: 117 CGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINE---------------- 160
Query: 272 TEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
A ++F ++ +++ +S+NA++AG+ G +AL F + E +
Sbjct: 161 ---------------AEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 332 --LTEFTLTSVVNAC---GLIMEAKLSEQIHGFVMKFGL--GSNDCIEAALLDMLTRCGR 384
EFTLTS++ AC G+I K QIHGF+++ G S+ I +L+D+ +CG
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGK---QIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 385 MADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSV 444
+ A K F + I W+S+I GYA+ G+ A+ LF + Q E D AL+S+
Sbjct: 263 LFSARKAFDQ--IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQ-ELNSQIDSFALSSI 319
Query: 445 LGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDI 504
+GV GKQ+ + A+K + V NS+V MY KC + A K F +M D+
Sbjct: 320 IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDV 379
Query: 505 VSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLF 564
+SW +I G+ H G +++ ++ M + +I+PD + ++ ++SA ++ + + +LF
Sbjct: 380 ISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGM--IKEGEELF 437
Query: 565 LSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLN 624
+ + I+P EHYA +V +LG G L+EA+ I+ MP +P V +W+ LL CR+ +
Sbjct: 438 SKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Query: 625 TTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWII 684
+GK V K +L ++ ++PA Y+++SNLY +G W+ RE KG +K SW+
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Query: 685 HQNKVHSFYVRDKSHPREKDIYSGLEILILECLKA---------GYVPDTSFVLHEVEEH 735
+ +VH F + SHP L +I E LK GYV LH++++
Sbjct: 558 IEREVHFFRSGEDSHP--------LTPVIQETLKEAERRLREELGYVYGLKHELHDIDDE 609
Query: 736 QKKDFLFYHSAKLAATYGLLT---TPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFL 792
K++ L HS KLA L T G+ +R+ KN+ C DCH F+K +S +T+ +
Sbjct: 610 SKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVV 669
Query: 793 RDASGFHHFLNGQCSCKDYW 812
RDA FH F +G CSC DYW
Sbjct: 670 RDAVRFHSFEDGCCSCGDYW 689
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/513 (26%), Positives = 239/513 (46%), Gaps = 40/513 (7%)
Query: 5 LRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNV 64
LR+ + G +H L+K + N LI Y K AYK+F + NV
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 65 VSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
VS+++L+SG G + ++ LF M +GI PNE +F L AC L LE G QIH
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
+K+G V V N+L+ +Y K ++ K+F + + +SWN +I+ V+ K
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGR-INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 185 AFELFRDMKRDN-GFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGL--GANLSVNN 241
A + F M+ N D FT+++LL AC+ ++ G+ +H +R G ++ ++
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 242 ALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVS 301
+L+ Y KC GY+ A + FD++ EK +S
Sbjct: 252 SLVDLYVKC-------------------------------GYLFSARKAFDQIKEKTMIS 280
Query: 302 YNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVM 361
+++L+ GY + G+ +EA+GLF +L E + F L+S++ + +Q+ +
Sbjct: 281 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAV 340
Query: 362 KFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHA 421
K G + +++DM +CG + +AEK F D I WT +I GY + G + +
Sbjct: 341 KLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQL--KDVISWTVVITGYGKHGLGKKS 398
Query: 422 ILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKT-GFSSDLGVANSMV 480
+ +F++ + PDE+ +VL C G + G+++ S L+T G + +V
Sbjct: 399 VRIFYE-MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 457
Query: 481 SMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIA 512
+ + + A + MP ++ W L++
Sbjct: 458 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/549 (34%), Positives = 328/549 (59%), Gaps = 12/549 (2%)
Query: 264 PVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFV 323
P+M ++ + +I Y++F ++ A ++FD+MP++N +S+ +++ Y K +AL L V
Sbjct: 94 PMMFLVNV--LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLV 151
Query: 324 KLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCG 383
+L + + +T +SV+ +C + + ++ +H ++K GL S+ + +AL+D+ + G
Sbjct: 152 LMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 384 RMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTS 443
DA +F T D+I+W S+I G+A++ + + A+ LF + + A + ++ LTS
Sbjct: 209 EPEDALSVFDEMVTG--DAIVWNSIIGGFAQNSRSDVALELFKRMK-RAGFIAEQATLTS 265
Query: 444 VLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHD 503
VL C L E+G Q H + +K + DL + N++V MY KC ++ +A++ FN+M D
Sbjct: 266 VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 504 IVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKL 563
+++W+ +I+G + EAL ++ M+ + KP+ IT V ++ A + L ++
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL--LEDGWYY 381
Query: 564 FLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRL 623
F SMK +Y I+P EHY ++ +LG G L++A + +N M +P WR LL +CR++
Sbjct: 382 FRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQR 441
Query: 624 NTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWI 683
N + + AK ++A++P+D TY L+SN+Y++S +W + E +R MR++G +K P SWI
Sbjct: 442 NMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWI 501
Query: 684 IHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFY 743
++H+F + D SHP+ ++ L LI GYVP+T+FVL ++E Q +D L +
Sbjct: 502 EVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRH 561
Query: 744 HSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLN 803
HS KLA +GL+T P + +RI KN+ CGDCH F K S + R I +RD +HHF +
Sbjct: 562 HSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQD 621
Query: 804 GQCSCKDYW 812
G+CSC DYW
Sbjct: 622 GKCSCGDYW 630
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 228/488 (46%), Gaps = 49/488 (10%)
Query: 68 TSLISGLAKLGREEE---AIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHAL 124
T L+S +L + + A++ ++S G+ + ++ ++ CI + G I
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 125 IVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEK 184
+ G +F+ N L+ +Y KF+ L+ +LFD++P ++ +SW T+IS+ ++K
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNL-LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK 145
Query: 185 AFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALI 244
A EL M RDN + +T S++L +C G + + R +H I+ GL +++ V +ALI
Sbjct: 146 ALELLVLMLRDN-VRPNVYTYSSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALI 201
Query: 245 GFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNA 304
+ K G +D +++ + M D I II + + D+A+E+F +M
Sbjct: 202 DVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA------- 254
Query: 305 LLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFG 364
G + + TLTSV+ AC + +L Q H ++K+
Sbjct: 255 ------------------------GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY- 289
Query: 365 LGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILL 424
+ + AL+DM +CG + DA ++F + D I W++MI G A++G + A+ L
Sbjct: 290 -DQDLILNNALVDMYCKCGSLEDALRVFNQ--MKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 425 FHQSQSEATVVPDEIALTSVLGVCGTLGFHEMG-KQIHSYALKTGFSSDLGVANSMVSMY 483
F + +S T P+ I + VL C G E G S G M+ +
Sbjct: 347 FERMKSSGT-KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLL 405
Query: 484 FKCCNMSNAIKAFNKMPSH-DIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKP-DAIT 541
K + +A+K N+M D V+W L+ + R + LA +++ + ++ P DA T
Sbjct: 406 GKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQR--NMVLAEYAAKKVIALDPEDAGT 463
Query: 542 FVLIISAY 549
+ L+ + Y
Sbjct: 464 YTLLSNIY 471
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 146/258 (56%), Gaps = 7/258 (2%)
Query: 37 NPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV 96
N LI+ Y+K + DA+++F + NV+S+T++IS +K ++A+EL M + +
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 97 PNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLK 156
PN +++ ++L +C + ++ + +H I+K G VFV +AL+ ++ K D L
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED-ALS 215
Query: 157 LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCF 216
+FDE+ D + WN++I + A ELF+ MKR GF + T++++L ACTG
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTSVLRACTGLA 274
Query: 217 VLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIII 276
+L G H H ++ +L +NNAL+ Y KCG ++D + + +M D+IT + +I
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 277 AYMEFGYVDLAVEIFDKM 294
+ GY A+++F++M
Sbjct: 333 GLAQNGYSQEALKLFERM 350
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 130/254 (51%), Gaps = 5/254 (1%)
Query: 11 CGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSL 70
C +S + +H +IK LE D + LI + KLG DA +F + + + + + S+
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 71 ISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGC 130
I G A+ R + A+ELF RM+ G + + + ++L AC L LELG Q H IVK
Sbjct: 232 IGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD- 290
Query: 131 VDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFR 190
+ + NAL+ +Y K L+ L++F+++ +D ++W+T+IS + ++A +LF
Sbjct: 291 -QDLILNNALVDMYCKCG-SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 191 DMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRI-GLGANLSVNNALIGFYTK 249
MK +G +Y TI +L AC+ +L +G ++ G+ +I K
Sbjct: 349 RMK-SSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGK 407
Query: 250 CGRVKDVVALLERM 263
G++ D V LL M
Sbjct: 408 AGKLDDAVKLLNEM 421
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 317/574 (55%), Gaps = 47/574 (8%)
Query: 284 VDLAVEIFDKMPEKNSVSYNALLAGYCKNG--KAMEALGLFVKLLEEGLV-LTEFTLTSV 340
+D A +IF++MP++N S+N ++ G+ ++ KA+ A+ LF +++ + V FT SV
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 341 VNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRD 400
+ AC + + +QIHG +K+G G ++ + + L+ M CG M DA +FY+ ++D
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 401 ------------DSIIWTSMICGYARSGKPEHAILLFHQSQSEATVV------------- 435
+ ++W MI GY R G + A +LF + + + V
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 436 -----------------PDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANS 478
P+ + L SVL LG E+G+ +H YA +G D + ++
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 479 MVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPD 538
++ MY KC + AI F ++P ++++W+ +I G +H Q +A+ + M +A ++P
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 539 AITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEE 598
+ ++ +++A + L V+ R+ F M ++ +EP EHY +V +LG G L+EAEE
Sbjct: 375 DVAYINLLTACSHGGL--VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 599 TINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGR 658
I NMP +P +W+ALL +CR++ N +GKRVA ++ M P D Y+ +SN+Y+S G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 659 WHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLK 718
W +R M+EK RK P S I +H F V D SHP+ K+I S L + +
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRL 552
Query: 719 AGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSF 778
AGY P T+ VL +EE K++ L YHS K+A +GL++T G+P+RIVKN+ C DCHS
Sbjct: 553 AGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSS 612
Query: 779 LKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
+K +S V +R+I +RD FHHF +G CSC DYW
Sbjct: 613 IKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 201/421 (47%), Gaps = 36/421 (8%)
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFC---------LDYLLKLFDELPHKDTVSWN 170
QIHA+ +K G + ++ FC LDY K+F+++P ++ SWN
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEIL------RFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 171 TVIS--SVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHA 228
T+I S +E + A LF +M D + FT ++L AC + EG+ +H A
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 229 IRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPV-MDIITLTE-------------I 274
++ G G + V + L+ Y CG +KD L + + D++ +T+ +
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVM 214
Query: 275 IIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTE 334
I YM G A +FDKM +++ VS+N +++GY NG +A+ +F ++ + +
Sbjct: 215 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 274
Query: 335 FTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYR 394
TL SV+ A + +L E +H + G+ +D + +AL+DM ++CG + A +F R
Sbjct: 275 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 395 WPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFH 454
P R++ I W++MI G+A G+ AI F + + +A V P ++A ++L C G
Sbjct: 335 LP--RENVITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHGGLV 391
Query: 455 EMGKQIHSYALKT-GFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIA 512
E G++ S + G + MV + + + A + MP D V W L+
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 513 G 513
Sbjct: 452 A 452
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 197/464 (42%), Gaps = 89/464 (19%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPLIS--AYLKLGH--VADAYKIFYGLSSPNVV 65
C + IHA IK +DT ++ A L H + A+KIF + N
Sbjct: 32 NCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCF 91
Query: 66 SFTSLISGLAKLGREEE--AIELFFRMRSEGIV-PNEHSFVAILTACIRLLELELGFQIH 122
S+ ++I G ++ ++ AI LF+ M S+ V PN +F ++L AC + +++ G QIH
Sbjct: 92 SWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIH 151
Query: 123 ALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLL--------------------------- 155
L +K G FV + L+ +Y F D +
Sbjct: 152 GLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLW 211
Query: 156 -----------------KLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGF 198
LFD++ + VSWNT+IS ++ A E+FR+MK+ +
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGD-I 270
Query: 199 TVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVA 258
+Y T+ ++L A + L G +H +A G+ + + +ALI Y+KCG ++ +
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 259 LLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEA 318
+ ER+P ++IT ++A++ G+ +G+A +A
Sbjct: 331 VFERLPRENVIT-------------------------------WSAMINGFAIHGQAGDA 359
Query: 319 LGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEAKLSEQIHGFVMKFGLGSNDCIEAAL 375
+ F K+ + G+ ++ +++ AC GL+ E + V GL +
Sbjct: 360 IDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR--RYFSQMVSVDGLEPRIEHYGCM 417
Query: 376 LDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
+D+L R G + +AE+ P DD +IW +++ G E
Sbjct: 418 VDLLGRSGLLDEAEEFILNMPIKPDD-VIWKALLGACRMQGNVE 460
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 162/343 (47%), Gaps = 17/343 (4%)
Query: 3 NSLRLSVQCGEVSLAKAI-HASLIK----LLLEQDTRFG-----NPLISAYLKLGHVADA 52
N +R+ V CG + A+ + + ++I+ ++ ++ R G N +I Y++LG A
Sbjct: 168 NLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAA 227
Query: 53 YKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRL 112
+F + +VVS+ ++ISG + G ++A+E+F M+ I PN + V++L A RL
Sbjct: 228 RMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL 287
Query: 113 LELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTV 172
LELG +H G + +AL+ +Y K ++ + +F+ LP ++ ++W+ +
Sbjct: 288 GSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI-IEKAIHVFERLPRENVITWSAM 346
Query: 173 ISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRI- 231
I+ + A + F M++ D I+ LLTAC+ ++ EGR + + +
Sbjct: 347 INGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN-LLTACSHGGLVEEGRRYFSQMVSVD 405
Query: 232 GLGANLSVNNALIGFYTKCGRVKDVVALLERMPVM-DIITLTEIIIAYMEFGYVDLA--- 287
GL + ++ + G + + + MP+ D + ++ A G V++
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Query: 288 VEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGL 330
I M +S +Y AL Y G E + +++ E+ +
Sbjct: 466 ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 459 QIHSYALKTGFSSDLGVANSMVSMYFKCCNMSN--------AIKAFNKMPSHDIVSWNGL 510
QIH+ +K+G D A ++ + C S+ A K FN+MP + SWN +
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEIL----RFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTI 96
Query: 511 IAGHLLHRQGDEALAV---WSSMEKASIKPDAITFVLIISA 548
I G + +A+ + M ++P+ TF ++ A
Sbjct: 97 IRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/701 (31%), Positives = 367/701 (52%), Gaps = 40/701 (5%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
+ L +HA IKL L + G+ L+S Y K + A K+F L N V + ++I G
Sbjct: 343 LDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRG 402
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDS 133
A G + +ELF M+S G ++ +F ++L+ C +LE+G Q H++I+K +
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 134 VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMK 193
+FV NAL+ +Y K L+ ++F+ + +D V+WNT+I S V + +AF+LF+ M
Sbjct: 463 LFVGNALVDMYAKCG-ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMN 521
Query: 194 RDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRV 253
G D +++ L ACT L +G+ VH +++ GL +L ++LI Y+KCG +
Sbjct: 522 L-CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGII 580
Query: 254 KDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNG 313
KD A ++F +PE + VS NAL+AGY +N
Sbjct: 581 KD-------------------------------ARKVFSSLPEWSVVSMNALIAGYSQN- 608
Query: 314 KAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGS-NDCIE 372
EA+ LF ++L G+ +E T ++V AC L Q HG + K G S + +
Sbjct: 609 NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 373 AALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEA 432
+LL M M +A +F + + ++WT M+ G++++G E A L F++
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKS-IVLWTGMMSGHSQNGFYEEA-LKFYKEMRHD 726
Query: 433 TVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNA 492
V+PD+ +VL VC L G+ IHS D +N+++ MY KC +M +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 493 IKAFNKMPSH-DIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRY 551
+ F++M ++VSWN LI G+ + ++AL ++ SM ++ I PD ITF+ +++A +
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 552 TNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSV 611
V RK+F M Y IE +H A +V +LG WG+L+EA++ I +P +
Sbjct: 847 AGK--VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARL 904
Query: 612 WRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMRE 671
W +LL +CRI + G+ A+ ++ +EPQ+ + Y+L+SN+Y+S G W + +R+ MR+
Sbjct: 905 WSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRD 964
Query: 672 KGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEIL 712
+G +K P SWI + + H F DKSH I LE L
Sbjct: 965 RGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDL 1005
Score = 236 bits (601), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 159/535 (29%), Positives = 255/535 (47%), Gaps = 72/535 (13%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
V + IH S+IK+ LE+++ G L+ Y K ++DA ++F + PN V +T L SG
Sbjct: 176 VEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSG 235
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDS 133
K G EEA+ +F RMR EG P+ +FV ++ IRL +L+
Sbjct: 236 YVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLK----------------- 278
Query: 134 VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMK 193
D L LF E+ D V+WN +IS A E F +M
Sbjct: 279 ------------------DARL-LFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNM- 318
Query: 194 RDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRV 253
R + T+ ++L+A L G VHA AI++GL +N+ V ++L+ Y+KC
Sbjct: 319 RKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC--- 375
Query: 254 KDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNG 313
E+M + A ++F+ + EKN V +NA++ GY NG
Sbjct: 376 -------EKM---------------------EAAAKVFEALEEKNDVFWNAMIRGYAHNG 407
Query: 314 KAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEA 373
++ + + LF+ + G + +FT TS+++ C + ++ Q H ++K L N +
Sbjct: 408 ESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGN 467
Query: 374 ALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEAT 433
AL+DM +CG + DA ++F R DRD+ + W ++I Y + A LF + +
Sbjct: 468 ALVDMYAKCGALEDARQIFERM-CDRDN-VTWNTIIGSYVQDENESEAFDLFKR-MNLCG 524
Query: 434 VVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAI 493
+V D L S L C + GKQ+H ++K G DL +S++ MY KC + +A
Sbjct: 525 IVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDAR 584
Query: 494 KAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISA 548
K F+ +P +VS N LIAG+ +EA+ ++ M + P ITF I+ A
Sbjct: 585 KVFSSLPEWSVVSMNALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEA 638
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 238/534 (44%), Gaps = 44/534 (8%)
Query: 113 LELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTV 172
L L +G +H+ + +G + NA++ LY K + + Y K FD L KD +WN++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCA-QVSYAEKQFDFL-EKDVTAWNSM 131
Query: 173 ISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIG 232
+S + + K F + + F + FT S +L+ C + GR +H I++G
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFP-NKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 233 LGANLSVNNALIGFYTKCGRVKD-------------------------------VVALLE 261
L N AL+ Y KC R+ D V + E
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 262 RMP----VMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAME 317
RM D + +I Y+ G + A +F +M + V++N +++G+ K G
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 318 ALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLD 377
A+ F + + + T TL SV++A G++ L +H +K GL SN + ++L+
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 378 MLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPD 437
M ++C +M A K+F D + W +MI GYA +G+ + LF +S + D
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKND--VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNI-D 427
Query: 438 EIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFN 497
+ TS+L C EMG Q HS +K + +L V N++V MY KC + +A + F
Sbjct: 428 DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 498 KMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLV 557
+M D V+WN +I ++ EA ++ M I D + A + + L
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVH-GLY 546
Query: 558 DSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSV 611
+ LS+K ++ +SL+ + G +++A + +++P VS+
Sbjct: 547 QGKQVHCLSVKC--GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 238/545 (43%), Gaps = 49/545 (8%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
++ + H+ +IK L ++ GN L+ Y K G + DA +IF + + V++ ++I
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIG 502
Query: 73 GLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVD 132
+ E EA +LF RM GIV + + L AC + L G Q+H L VK G
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
+ ++L+ +Y K D K+F LP VS N +I+ ++ E+A LF++M
Sbjct: 563 DLHTGSSLIDMYSKCGIIKD-ARKVFSSLPEWSVVSMNALIAG-YSQNNLEEAVVLFQEM 620
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGL---GANLSVNNALIGFYTK 249
G T +T++ AC L G H + G G L + +L+G Y
Sbjct: 621 -LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI--SLLGMYMN 677
Query: 250 CGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGY 309
+ + AL + K+ V + +++G+
Sbjct: 678 SRGMTEACALFSELS------------------------------SPKSIVLWTGMMSGH 707
Query: 310 CKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSND 369
+NG EAL + ++ +G++ + T +V+ C ++ + IH + ++
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 370 CIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQ 429
L+DM +CG M + ++F R + + W S+I GYA++G E A+ +F S
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRR-RSNVVSWNSLINGYAKNGYAEDALKIF-DSM 825
Query: 430 SEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYAL-KTGFSSDLGVANSMVSMYFKCCN 488
++ ++PDEI VL C G G++I + + G + + MV + +
Sbjct: 826 RQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGY 885
Query: 489 MSNA---IKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKP-DAITFVL 544
+ A I+A N P D W+ L+ +H GD+ S+ + ++P ++ +VL
Sbjct: 886 LQEADDFIEAQNLKP--DARLWSSLLGACRIH--GDDIRGEISAEKLIELEPQNSSAYVL 941
Query: 545 IISAY 549
+ + Y
Sbjct: 942 LSNIY 946
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%), Gaps = 6/224 (2%)
Query: 346 LIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIW 405
L + ++ + +H + G+ S + A++D+ +C +++ AEK F D W
Sbjct: 72 LALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF---DFLEKDVTAW 128
Query: 406 TSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYAL 465
SM+ Y+ GKP + F S E + P++ + VL C E G+QIH +
Sbjct: 129 NSMLSMYSSIGKPGKVLRSF-VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI 187
Query: 466 KTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALA 525
K G + ++V MY KC +S+A + F + + V W L +G++ +EA+
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 526 VWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKT 569
V+ M +PD + FV +I+ Y L + R LF M +
Sbjct: 248 VFERMRDEGHRPDHLAFVTVINT--YIRLGKLKDARLLFGEMSS 289
Score = 70.1 bits (170), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 5/159 (3%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGL- 59
F LR+ + +AIH+ + L + D N LI Y K G + + ++F +
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Query: 60 SSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGF 119
NVVS+ SLI+G AK G E+A+++F MR I+P+E +F+ +LTAC ++ G
Sbjct: 795 RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Query: 120 QIHALIVKM----GCVDSVFVTNALMGLYGKFSFCLDYL 154
+I +++ VD V L+G +G D++
Sbjct: 855 KIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFI 893
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/668 (31%), Positives = 354/668 (52%), Gaps = 45/668 (6%)
Query: 154 LLKLFDELPHK-DTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTAC 212
L LF+ K D SWN+VI+ + + +A F M++ + + + + AC
Sbjct: 28 LTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS-SFPCAIKAC 86
Query: 213 TGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLT 272
+ F + G+ H A G +++ V++ALI Y+ CG+++D
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLED----------------- 129
Query: 273 EIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLL------ 326
A ++FD++P++N VS+ +++ GY NG A++A+ LF LL
Sbjct: 130 --------------ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD 175
Query: 327 EEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGR-- 384
++ + L L SV++AC + L+E IH FV+K G + LLD + G
Sbjct: 176 DDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGG 235
Query: 385 MADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSV 444
+A A K+F + D+D + + S++ YA+SG A +F + V + I L++V
Sbjct: 236 VAVARKIFDQ-IVDKD-RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTV 293
Query: 445 LGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDI 504
L G +GK IH ++ G D+ V S++ MY KC + A KAF++M + ++
Sbjct: 294 LLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNV 353
Query: 505 VSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLF 564
SW +IAG+ +H +AL ++ +M + ++P+ ITFV +++A + L++ + F
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHV--EGWRWF 411
Query: 565 LSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLN 624
+MK + +EP EHY +V +LG GFL++A + I M +P +W +LL +CRI N
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
Query: 625 TTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWII 684
+ + + ++ + Y+L+S++Y+ +GRW + E VR M+ +G K P S +
Sbjct: 472 VELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531
Query: 685 HQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYH 744
+VH F + D+ HP+ + IY L L + L+AGYV +TS V H+V+E +K+ L H
Sbjct: 532 LNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVH 591
Query: 745 SAKLAATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNG 804
S KLA +G++ T G V +VKN+ C DCH+ +K +S + RE +RDA FHHF +G
Sbjct: 592 SEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDG 651
Query: 805 QCSCKDYW 812
CSC DYW
Sbjct: 652 GCSCGDYW 659
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 220/472 (46%), Gaps = 47/472 (9%)
Query: 59 LSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELG 118
+ +V S+ S+I+ LA+ G EA+ F MR + P SF + AC L ++ G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 119 FQIHALIVKMGCVDSVFVTNALMGLYGKFSFC--LDYLLKLFDELPHKDTVSWNTVISSV 176
Q H G +FV++AL+ +Y S C L+ K+FDE+P ++ VSW ++I
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMY---STCGKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 177 VNEFEYEKAFELFRDM-----KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRI 231
A LF+D+ D+ +D + ++++AC+ ++H+ I+
Sbjct: 153 DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKR 212
Query: 232 GLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIF 291
G +SV N L+ Y K G G V +A +IF
Sbjct: 213 GFDRGVSVGNTLLDAYAKGGE-----------------------------GGVAVARKIF 243
Query: 292 DKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV-LTEFTLTSVVNACGLIMEA 350
D++ +K+ VSYN++++ Y ++G + EA +F +L++ +V TL++V+ A
Sbjct: 244 DQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL 303
Query: 351 KLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMIC 410
++ + IH V++ GL + + +++DM +CGR+ A K F R S WT+MI
Sbjct: 304 RIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS--WTAMIA 361
Query: 411 GYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFS 470
GY G A+ LF + ++ V P+ I SVL C G H G + + A+K F
Sbjct: 362 GYGMHGHAAKALELF-PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFN-AMKGRFG 419
Query: 471 SDLGVAN--SMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQ 519
+ G+ + MV + + + A +M D + W+ L+A +H+
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 183/405 (45%), Gaps = 48/405 (11%)
Query: 17 AKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAK 76
K H + D + LI Y G + DA K+F + N+VS+TS+I G
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 77 LGREEEAIELFFRM------RSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGC 130
G +A+ LF + + + + V++++AC R+ L IH+ ++K G
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 131 VDSVFVTNALMGLYGKFS-FCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELF 189
V V N L+ Y K + K+FD++ KD VS+N+++S +AFE+F
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 190 RDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTK 249
R + ++ T + T+ST+L A + L G+ +H IR+GL ++ V ++I Y K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 250 CGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGY 309
CGRV+ +RM ++ + T +I Y G+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH-------------------------- 368
Query: 310 CKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNAC---GLIMEA-KLSEQIHG-FVMKFG 364
A +AL LF +++ G+ T SV+ AC GL +E + + G F ++ G
Sbjct: 369 -----AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 365 LGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMI 409
L C ++D+L R G + A + R + DSIIW+S++
Sbjct: 424 LEHYGC----MVDLLGRAGFLQKAYDLIQRMKM-KPDSIIWSSLL 463
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 7/277 (2%)
Query: 16 LAKAIHASLIKLLLEQDTRFGNPLISAYLKLGH--VADAYKIFYGLSSPNVVSFTSLISG 73
L ++IH+ +IK ++ GN L+ AY K G VA A KIF + + VS+ S++S
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 74 LAKLGREEEAIELFFRMRSEGIVP-NEHSFVAILTACIRLLELELGFQIHALIVKMGCVD 132
A+ G EA E+F R+ +V N + +L A L +G IH +++MG D
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
V V +++ +Y K ++ K FD + +K+ SW +I+ KA ELF M
Sbjct: 321 DVIVGTSIIDMYCKCGR-VETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEG-RAVHAHAIRIGLGANLSVNNALIGFYTKCG 251
D+G +Y T ++L AC+ + +EG R +A R G+ L ++ + G
Sbjct: 380 I-DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 252 RVKDVVALLERMPVM-DIITLTEIIIAYMEFGYVDLA 287
++ L++RM + D I + ++ A V+LA
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 9/182 (4%)
Query: 2 FNSLRLSV------QCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKI 55
FN++ LS G + + K IH +I++ LE D G +I Y K G V A K
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 56 FYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRL-LE 114
F + + NV S+T++I+G G +A+ELF M G+ PN +FV++L AC L
Sbjct: 345 FDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLH 404
Query: 115 LELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHK-DTVSWNTVI 173
+E +A+ + G + ++ L G+ F L L + K D++ W++++
Sbjct: 405 VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGF-LQKAYDLIQRMKMKPDSIIWSSLL 463
Query: 174 SS 175
++
Sbjct: 464 AA 465
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/744 (29%), Positives = 368/744 (49%), Gaps = 54/744 (7%)
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVD- 132
L+K + EA E M G+ + +S+ + AC L L G +H + +MG +
Sbjct: 58 LSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-RMGIENP 116
Query: 133 SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDM 192
SV + N ++ +Y + L+ KLFDE+ + VS T+IS+ + +KA LF M
Sbjct: 117 SVLLQNCVLQMYCECR-SLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGM 175
Query: 193 KRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGR 252
+G +TLL + L GR +HAH IR GL +N S+ ++ Y KCG
Sbjct: 176 LA-SGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 253 VKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKN 312
+ + ++M V + T +++ GY +
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMV-------------------------------GYTQA 263
Query: 313 GKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIE 372
G+A +AL LFV L+ EG+ F + V+ AC + E L +QIH V K GL S +
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 373 AALLDMLTRCGRMADAEKMFY--RWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQS 430
L+D +C A + F R P D + W+++I GY + + E A+ F +S
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPND----VSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 431 EATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMS 490
+ + + TS+ C L +G Q+H+ A+K +++++MY KC +
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 491 NAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYR 550
+A + F M + DIV+W I+GH + EAL ++ M +KP+++TF+ +++A
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
Query: 551 YTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVS 610
+ LV+ + +M YN+ PT +HY ++ + G L+EA + + NMPF+P
Sbjct: 500 HA--GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAM 557
Query: 611 VWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMR 670
W+ L C N +G+ + + ++P+D A Y+L NLY+ +G+W + + + M
Sbjct: 558 SWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMN 617
Query: 671 EKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLH 730
E+ +K S SWI + K+H F V DK HP+ ++IY L+ G++ F +
Sbjct: 618 ERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF------DGFMEGDMFQCN 671
Query: 731 EVEEHQKKDFLFYHSAKLAATYGLLTT--PAGQPVRIVKNILTCGDCHSFLKYVSVVTRR 788
E +++ L HS +LA +GL++ A P+++ KN+ C DCH F K+VS+VT
Sbjct: 672 MTE---RREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGH 728
Query: 789 EIFLRDASGFHHFLNGQCSCKDYW 812
EI +RD+ FHHF G+CSC DYW
Sbjct: 729 EIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 10/310 (3%)
Query: 14 VSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISG 73
+ + IHA +I+ L +T +++ Y+K G + A ++F ++ V+ T L+ G
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 74 LAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDS 133
+ GR +A++LF + +EG+ + F +L AC L EL LG QIHA + K+G
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 134 VFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMK 193
V V L+ Y K S + + F E+ + VSW+ +IS ++E+A + F+ ++
Sbjct: 320 VSVGTPLVDFYIKCS-SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 194 RDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRV 253
N ++ FT +++ AC+ G VHA AI+ L + +ALI Y+KCG +
Sbjct: 379 SKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Query: 254 KDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMP----EKNSVSYNALL--- 306
D + E M DI+ T I + +G A+ +F+KM + NSV++ A+L
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTAC 498
Query: 307 --AGYCKNGK 314
AG + GK
Sbjct: 499 SHAGLVEQGK 508
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 164/355 (46%), Gaps = 19/355 (5%)
Query: 13 EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLIS 72
E++L K IHA + KL LE + G PL+ Y+K A + F + PN VS++++IS
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 73 GLAKLGREEEAIELFFRMRSEGI-VPNEHSFVAILTACIRLLELELGFQIHALIVKMGCV 131
G ++ + EEA++ F +RS+ + N ++ +I AC L + +G Q+HA +K +
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 132 DSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRD 191
S + +AL+ +Y K CLD ++F+ + + D V+W IS +A LF
Sbjct: 420 GSQYGESALITMYSKCG-CLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 478
Query: 192 MKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIR-IGLGANLSVNNALIGFYTKC 250
M G + T +LTAC+ ++ +G+ +R + + + +I Y +
Sbjct: 479 MV-SCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARS 537
Query: 251 GRVKDVVALLERMP----VMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALL 306
G + + + ++ MP M + ++A E ++ +++ Y
Sbjct: 538 GLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPF 597
Query: 307 AGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVM 361
Y GK EA + +KL+ E ++ E + C I E +IH F++
Sbjct: 598 NLYTWAGKWEEAAEM-MKLMNERMLKKELS-------CSWIQEKG---KIHRFIV 641
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 334/640 (52%), Gaps = 73/640 (11%)
Query: 209 LTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDI 268
L C L +A+HAH +++G+ + N L+ Y KCG
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASH------------- 56
Query: 269 ITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCK---NGKAMEALGLFVKL 325
A+++FD+MP ++ +++ ++L + +GK +
Sbjct: 57 ------------------ALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSS 98
Query: 326 LEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRM 385
L +F +++V AC + Q+H + +++ ++++L+DM +CG +
Sbjct: 99 SG--LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLL 156
Query: 386 ADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFH------------------- 426
A+ +F ++I WT+M+ GYA+SG+ E A+ LF
Sbjct: 157 NSAKAVFDSIRVK--NTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQ 214
Query: 427 ------------QSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLG 474
+ + E + D + L+S++G C L G+Q+H + GF S +
Sbjct: 215 SGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVF 274
Query: 475 VANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKAS 534
++N+++ MY KC ++ A F++M D+VSW LI G H Q ++ALA++ M
Sbjct: 275 ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 535 IKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLE 594
+KP+ +TFV +I Y +++ V+ R+LF SM Y I P+ +HY L+ +LG G L+
Sbjct: 335 VKPNEVTFVGLI--YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLD 392
Query: 595 EAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILA-MEPQDPATYILVSNLY 653
EAE I+ MPF P W ALL +C+ + +G R+A H+++ + +DP+TYIL+SN+Y
Sbjct: 393 EAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIY 452
Query: 654 SSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILI 713
+S+ W R + E RK P S + + + FY + SHP ++DI+ L+ L
Sbjct: 453 ASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLE 512
Query: 714 LEC-LKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQPVRIVKNILTC 772
E ++ GYVPDTS++LH+++E +K+ LF+HS + A YGLL G P+RIVKN+ C
Sbjct: 513 EEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVC 572
Query: 773 GDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
GDCH LK++S +T REI +RDA+ +HHF G+CSC D+W
Sbjct: 573 GDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 225/463 (48%), Gaps = 9/463 (1%)
Query: 106 LTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKD 165
L C R L +HA IVK+G V + N L+ +YGK + L++FDE+PH+D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCG-AASHALQVFDEMPHRD 68
Query: 166 TVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVH 225
++W +V++++ K +F + +G D F S L+ AC + GR VH
Sbjct: 69 HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVH 128
Query: 226 AHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVD 285
H I + V ++L+ Y KCG + A+ + + V + I+ T ++ Y + G +
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKE 188
Query: 286 LAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGL-VLTEFTLTSVVNAC 344
A+E+F +P KN S+ AL++G+ ++GK +EA +F ++ E + +L L+S+V AC
Sbjct: 189 EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGAC 248
Query: 345 GLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSII 404
+ + Q+HG V+ G S I AL+DM +C + A+ +F R D +
Sbjct: 249 ANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSR--MRHRDVVS 306
Query: 405 WTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQI-HSY 463
WTS+I G A+ G+ E A+ L+ S V P+E+ ++ C +GF E G+++ S
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHG-VKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 464 ALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQGDE 522
G L ++ + + + A + MP D +W L++ +G
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 523 ALAVWSSMEKASIKPDAITFVLIISAYRYTNL--NLVDSCRKL 563
+ + + + D T++L+ + Y +L + ++ RKL
Sbjct: 426 GIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKL 468
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 194/455 (42%), Gaps = 66/455 (14%)
Query: 1 FFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLS 60
+ + L+L + ++ AKA+HA ++KL + Q N L++ Y K G + A ++F +
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 61 SPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV-PNEHSFVAILTACIRLLELELGF 119
+ +++ S+++ L + + + +F + S + P++ F A++ AC L ++ G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
Q+H + + V ++L+ +Y K L+ +FD + K+T+SW ++S
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGL-LNSAKAVFDSIRVKNTISWTAMVSGYAKS 184
Query: 180 FEYEKAFELFR-------------------------------DMKRDNGFTVDYFTISTL 208
E+A ELFR +M+R+ +D +S++
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 209 LTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDI 268
+ AC + GR VH I +G + + ++NALI Y KC V + RM D+
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 269 ITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEE 328
++ T +I+ + G +A +AL L+ ++
Sbjct: 305 VSWTSLIVGMAQHG-------------------------------QAEKALALYDDMVSH 333
Query: 329 GLVLTEFTLTSVVNACGLI-MEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMAD 387
G+ E T ++ AC + K E +G+ + LLD+L R G + +
Sbjct: 334 GVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDE 393
Query: 388 AEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAI 422
AE + + P D+ W +++ R G+ + I
Sbjct: 394 AENLIHTMPFPPDEP-TWAALLSACKRQGRGQMGI 427
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 139/290 (47%), Gaps = 13/290 (4%)
Query: 10 QCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTS 69
+CG ++ AKA+ S+ ++T ++S Y K G +A ++F L N+ S+T+
Sbjct: 152 KCGLLNSAKAVFDSI----RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTA 207
Query: 70 LISGLAKLGREEEAIELFFRMRSEGI-VPNEHSFVAILTACIRLLELELGFQIHALIVKM 128
LISG + G+ EA +F MR E + + + +I+ AC L G Q+H L++ +
Sbjct: 208 LISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 129 GCVDSVFVTNALMGLYGKFSFCLDYLL--KLFDELPHKDTVSWNTVISSVVNEFEYEKAF 186
G VF++NAL+ +Y K C D + +F + H+D VSW ++I + + EKA
Sbjct: 268 GFDSCVFISNALIDMYAK---CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKAL 324
Query: 187 ELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIR-IGLGANLSVNNALIG 245
L+ DM +G + T L+ AC+ + +GR + + G+ +L L+
Sbjct: 325 ALYDDMV-SHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 246 FYTKCGRVKDVVALLERMPV-MDIITLTEIIIAYMEFGYVDLAVEIFDKM 294
+ G + + L+ MP D T ++ A G + + I D +
Sbjct: 384 LLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/781 (29%), Positives = 395/781 (50%), Gaps = 50/781 (6%)
Query: 35 FGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMR-SE 93
GN ++ +++ G++ DA+ +F +S N+ S+ L+ G AK G +EA+ L+ RM
Sbjct: 131 LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 94 GIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDY 153
G+ P+ ++F +L C + +L G ++H +V+ G + V NAL+ +Y K
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 154 LLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVD--YFTISTLLTA 211
L LFD +P +D +SWN +IS + ELF M+ G +VD T++++++A
Sbjct: 251 RL-LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR---GLSVDPDLMTLTSVISA 306
Query: 212 CTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITL 271
C GR +HA+ I G ++SV N+L Y G ++
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE---------------- 350
Query: 272 TEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
A ++F +M K+ VS+ +++GY N +A+ + + ++ +
Sbjct: 351 ---------------AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 332 LTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKM 391
E T+ +V++AC + + ++H +K L S + L++M ++C + A +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 392 FYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTL 451
F+ P R + I WTS+I G + + A++ Q + T+ P+ I LT+ L C +
Sbjct: 456 FHNIP--RKNVISWTSIIAGLRLNNRCFEALIFLRQMK--MTLQPNAITLTAALAACARI 511
Query: 452 GFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLI 511
G GK+IH++ L+TG D + N+++ MY +C M+ A FN D+ SWN L+
Sbjct: 512 GALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQKK-DVTSWNILL 570
Query: 512 AGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRK--LFLSMKT 569
G+ QG + ++ M K+ ++PD ITF+ ++ + + R+ ++ S
Sbjct: 571 TGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM-----VRQGLMYFSKME 625
Query: 570 IYNIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGK 629
Y + P +HYA +V +LG G L+EA + I MP P +VW ALL++CRI +G+
Sbjct: 626 DYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685
Query: 630 RVAKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKV 689
A+HI ++ + YIL+ NLY+ G+W VR M+E G SW+ + KV
Sbjct: 686 LSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKV 745
Query: 690 HSFYVRDKSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLA 749
H+F DK HP+ K+I + LE + + G + + E + + HS + A
Sbjct: 746 HAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKA 805
Query: 750 ATYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCK 809
+GL+ T G P+ + KN+ C +CH +K++S RREI +RDA FHHF +G+CSC
Sbjct: 806 IAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCG 865
Query: 810 D 810
D
Sbjct: 866 D 866
Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 137/468 (29%), Positives = 229/468 (48%), Gaps = 36/468 (7%)
Query: 71 ISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGC 130
+ GL G+ EEA++L M+ + +E FVA++ C E G +++++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 131 VDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFR 190
V + NA + ++ +F +D +F ++ ++ SWN ++ + +++A L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWY-VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 191 DMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKC 250
M G D +T +L C G L G+ VH H +R G ++ V NALI Y KC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 251 GRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYC 310
G VK L +RMP DII+ +I +GY
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMI-------------------------------SGYF 273
Query: 311 KNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDC 370
+NG E L LF + + TLTSV++AC L+ + +L IH +V+ G +
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 371 IEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQS 430
+ +L M G +AEK+F R +R D + WT+MI GY + P+ AI + +
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSR--MERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMD 390
Query: 431 EATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMS 490
+ +V PDEI + +VL C TLG + G ++H A+K S + VAN++++MY KC +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 491 NAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPD 538
A+ F+ +P +++SW +IAG L+ + EAL M K +++P+
Sbjct: 451 KALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPN 497
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 142/515 (27%), Positives = 236/515 (45%), Gaps = 42/515 (8%)
Query: 11 CG---EVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSF 67
CG +++ K +H +++ E D N LI+ Y+K G V A +F + +++S+
Sbjct: 206 CGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISW 265
Query: 68 TSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVK 127
++ISG + G E +ELFF MR + P+ + ++++AC L + LG IHA ++
Sbjct: 266 NAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVIT 325
Query: 128 MGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNEFEYEKAFE 187
G + V N+L +Y + KLF + KD VSW T+IS F +KA +
Sbjct: 326 TGFAVDISVCNSLTQMYLNAGSWRE-AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 188 LFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFY 247
+R M +D+ D T++ +L+AC L G +H AI+ L + + V N LI Y
Sbjct: 385 TYRMMDQDS-VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443
Query: 248 TKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLA 307
+KC + + + +P KN +S+ +++A
Sbjct: 444 SKCKCIDKALDIFHNIP-------------------------------RKNVISWTSIIA 472
Query: 308 GYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGS 367
G N + EAL +F++ ++ L TLT+ + AC I ++IH V++ G+G
Sbjct: 473 GLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGL 531
Query: 368 NDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQ 427
+D + ALLDM RCGRM A F + + D W ++ GY+ G+ + LF +
Sbjct: 532 DDFLPNALLDMYVRCGRMNTAWSQF---NSQKKDVTSWNILLTGYSERGQGSMVVELFDR 588
Query: 428 SQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCC 487
++ V PDEI S+L C G S G + +L +V + +
Sbjct: 589 -MVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAG 647
Query: 488 NMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQGD 521
+ A K KMP + D W L+ +H + D
Sbjct: 648 ELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKID 682
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 306 LAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGL 365
L G C NGK EA+ L + E + + E ++V C E K +++ V L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLC----EWKRAQEEGSKVYSIAL 121
Query: 366 GSNDCIEA----ALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEHA 421
S + A L M R G + DA +F + + W ++ GYA+ G + A
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGK--MSERNLFSWNVLVGGYAKQGYFDEA 179
Query: 422 ILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMVS 481
+ L+H+ V PD VL CG + GK++H + ++ G+ D+ V N++++
Sbjct: 180 MCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALIT 239
Query: 482 MYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAIT 541
MY KC ++ +A F++MP DI+SWN +I+G+ + E L ++ +M S+ PD +T
Sbjct: 240 MYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMT 299
Query: 542 FVLIISA 548
+ISA
Sbjct: 300 LTSVISA 306
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 129/295 (43%), Gaps = 34/295 (11%)
Query: 411 GYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFS 470
G +GK E A+ L + Q E V DE +++ +C E G +++S AL + S
Sbjct: 68 GLCANGKLEEAMKLLNSMQ-ELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 471 SDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSM 530
+ + N+ ++M+ + N+ +A F KM ++ SWN L+ G+ DEA+ ++ M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 531 -EKASIKPDAITFVLIISA-------------------YRYT-NLNLVDSCRKLFL---- 565
+KPD TF ++ Y Y ++++V++ +++
Sbjct: 187 LWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGD 246
Query: 566 --SMKTIYNIEPTSEHYASLVSVLGYW--GFLEEAEE---TINNMPFQPKVSVWRALLDS 618
S + +++ P + + + GY+ G E E + + P + +++ +
Sbjct: 247 VKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISA 306
Query: 619 CRIRLNTTIGKRVAKHILAME-PQDPATYILVSNLYSSSGRWHNSELVREDMREK 672
C + + +G+ + +++ D + ++ +Y ++G W +E + M K
Sbjct: 307 CELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/662 (33%), Positives = 351/662 (53%), Gaps = 31/662 (4%)
Query: 156 KLFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGC 215
+LFDE+ ++ VSWN ++S + +A +F M N + TA
Sbjct: 69 QLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS---------WTAMVKG 119
Query: 216 FVLMEGRAVHAHAIRIGLGANLSVN-NALIGFYTKCGRVKDVVALLERMPVMDIITLTEI 274
+ + EG A ++ + V+ + G GR+ L + MPV D++ T +
Sbjct: 120 Y-MQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNM 178
Query: 275 IIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTE 334
I G VD A IFD+M E+N V++ ++ GY +N + A LF + E+ TE
Sbjct: 179 IGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TE 234
Query: 335 FTLTSVVNACGLIMEAKLSEQIHGF---VMKFGLGSNDCIEAALLDMLTRCGRMADAEKM 391
+ TS++ G + ++ + F MK + N A++ G ++ A ++
Sbjct: 235 VSWTSML--LGYTLSGRIEDAEEFFEVMPMKPVIACN-----AMIVGFGEVGEISKARRV 287
Query: 392 FYRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTL 451
F DRD++ W MI Y R G A+ LF Q Q + V P +L S+L VC TL
Sbjct: 288 F-DLMEDRDNAT-WRGMIKAYERKGFELEALDLFAQMQKQG-VRPSFPSLISILSVCATL 344
Query: 452 GFHEMGKQIHSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMPSHDIVSWNGLI 511
+ G+Q+H++ ++ F D+ VA+ +++MY KC + A F++ S DI+ WN +I
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404
Query: 512 AGHLLHRQGDEALAVWSSMEKASIKPDAITFVLIISAYRYTNLNLVDSCRKLFLSMKTIY 571
+G+ H G+EAL ++ M + P+ +T + I++A Y ++ ++F SM++ +
Sbjct: 405 SGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGK--LEEGLEIFESMESKF 462
Query: 572 NIEPTSEHYASLVSVLGYWGFLEEAEETINNMPFQPKVSVWRALLDSCRIRLNTTIGKRV 631
+ PT EHY+ V +LG G +++A E I +M +P +VW ALL +C+ + +
Sbjct: 463 CVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVA 522
Query: 632 AKHILAMEPQDPATYILVSNLYSSSGRWHNSELVREDMREKGFRKHPSRSWIIHQNKVHS 691
AK + EP + TY+L+S++ +S +W + +VR++MR K P SWI KVH
Sbjct: 523 AKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHM 582
Query: 692 FYVRD-KSHPREKDIYSGLEILILECLKAGYVPDTSFVLHEVEEHQKKDFLFYHSAKLAA 750
F K+HP + I LE +AGY PD S VLH+V+E +K D L HS +LA
Sbjct: 583 FTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAV 642
Query: 751 TYGLLTTPAGQPVRIVKNILTCGDCHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKD 810
YGLL P G P+R++KN+ CGDCH+ +K +S VT REI LRDA+ FHHF NG+CSC+D
Sbjct: 643 AYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRD 702
Query: 811 YW 812
YW
Sbjct: 703 YW 704
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/518 (24%), Positives = 241/518 (46%), Gaps = 34/518 (6%)
Query: 37 NPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIV 96
N ++S Y G +A ++F +S NVVS+ L+SG K EA +F M +V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 97 PNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLK 156
S+ A++ ++ E +G + +L +M + V T GL +D K
Sbjct: 112 ----SWTAMVKGYMQ--EGMVG-EAESLFWRMPERNEVSWTVMFGGLIDDGR--IDKARK 162
Query: 157 LFDELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFT----VDYFTISTLLTAC 212
L+D +P KD V+ +I + E ++A +F +M+ N T + + + +
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 213 TGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLT 272
F +M + +S + L+G YT GR++D E MP+ +I
Sbjct: 223 RKLFEVMPEK------------TEVSWTSMLLG-YTLSGRIEDAEEFFEVMPMKPVIACN 269
Query: 273 EIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLVL 332
+I+ + E G + A +FD M ++++ ++ ++ Y + G +EAL LF ++ ++G+
Sbjct: 270 AMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRP 329
Query: 333 TEFTLTSVVNACGLIMEAKLSEQIHGFVMKFGLGSNDCIEAALLDMLTRCGRMADAEKMF 392
+ +L S+++ C + + Q+H +++ + + + L+ M +CG + A+ +F
Sbjct: 330 SFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVF 389
Query: 393 YRWPTDRDDSIIWTSMICGYARSGKPEHAILLFHQSQSEATVVPDEIALTSVLGVCGTLG 452
R+ + D I+W S+I GYA G E A+ +FH+ S T +P+++ L ++L C G
Sbjct: 390 DRFSS--KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT-MPNKVTLIAILTACSYAG 446
Query: 453 FHEMGKQI-HSYALKTGFSSDLGVANSMVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGL 510
E G +I S K + + + V M + + A++ M D W L
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 511 IAGHLLHRQGDEALAVWSSMEKASIKPD-AITFVLIIS 547
+ H + D LA ++ + +PD A T+VL+ S
Sbjct: 507 LGACKTHSRLD--LAEVAAKKLFENEPDNAGTYVLLSS 542
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 143/307 (46%), Gaps = 22/307 (7%)
Query: 24 LIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEA 83
L ++ +D +I + G V +A IF + NVV++T++I+G + R + A
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVA 222
Query: 84 IELFFRMRSEGIVPNEHSFVAIL---TACIRLLELELGFQIHALIVKMGCVDSVFVTNAL 140
+LF M + E S+ ++L T R+ + E F++ + + C NA+
Sbjct: 223 RKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC-------NAM 271
Query: 141 MGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE-FEYEKAFELFRDMKRDNGFT 199
+ +G+ + ++FD + +D +W +I + + FE E A +LF M++ G
Sbjct: 272 IVGFGEVGE-ISKARRVFDLMEDRDNATWRGMIKAYERKGFELE-ALDLFAQMQK-QGVR 328
Query: 200 VDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVAL 259
+ ++ ++L+ C L GR VHAH +R ++ V + L+ Y KCG + +
Sbjct: 329 PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLV 388
Query: 260 LERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEK----NSVSYNALLAGYCKNGKA 315
+R DII II Y G + A++IF +MP N V+ A+L GK
Sbjct: 389 FDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKL 448
Query: 316 MEALGLF 322
E L +F
Sbjct: 449 EEGLEIF 455
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 17 AKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAK 76
+ +HA L++ + D + L++ Y+K G + A +F SS +++ + S+ISG A
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 77 LGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVF- 135
G EEA+++F M S G +PN+ + +AILTAC +LE G +I + CV
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 469
Query: 136 ---VTNALMGLYGKFSFCLDYLLKLFDELPHK-DTVSWNTVISS 175
T ++G G+ +D ++L + + K D W ++ +
Sbjct: 470 HYSCTVDMLGRAGQ----VDKAMELIESMTIKPDATVWGALLGA 509
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 364 bits (935), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 212/698 (30%), Positives = 345/698 (49%), Gaps = 75/698 (10%)
Query: 153 YLLKLFDELPHK-DTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTA 211
Y L +F +P +++ +N + + E +A LF R G +D F+ +L A
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSE-PRATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 212 CTGCFVLMEGRAVHAHAIRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITL 271
+ L EG +H A +I + V + Y CGR+
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRI------------------ 162
Query: 272 TEIIIAYMEFGYVDLAVEIFDKMPEKNSVSYNALLAGYCKNGKAMEALGLFVKLLEEGLV 331
+ A +FD+M ++ V++N ++ YC+ G EA LF ++ + ++
Sbjct: 163 -------------NYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 332 LTEFTLTSVVNACGLIMEAKLSEQIHGFV-----------------MKFGLGSNDC---- 370
E L ++V+ACG + + I+ F+ M G G D
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 371 ----------IEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPEH 420
+ A++ ++CGR+ DA+ +F + T++ D + WT+MI Y S P+
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ--TEKKDLVCWTTMISAYVESDYPQE 327
Query: 421 AILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIHSYALKTGFSSDLGVANSMV 480
A+ +F + + + PD +++ SV+ C LG + K +HS G S+L + N+++
Sbjct: 328 ALRVFEE-MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALI 386
Query: 481 SMYFKCCNMSNAIKAFNKMPSHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKPDAI 540
+MY KC + F KMP ++VSW+ +I +H + +AL++++ M++ +++P+ +
Sbjct: 387 NMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEV 446
Query: 541 TFVLIISAYRYTNLNLVDSCRKLFLSMKTIYNIEPTSEHYASLVSVLGYWGFLEEAEETI 600
TFV ++ Y ++ LV+ +K+F SM YNI P EHY +V + G L EA E I
Sbjct: 447 TFVGVL--YGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI 504
Query: 601 NNMPFQPKVSVWRALLDSCRIRLNTTIGKRVAKHILAMEPQDPATYILVSNLYSSSGRWH 660
+MP V +W +L+ +CRI +GK AK IL +EP +L+SN+Y+ RW
Sbjct: 505 ESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWE 564
Query: 661 NSELVREDMREKGFRKHPSRSWIIHQNKVHSFYVRDKSHPREKDIYSGLEILILECLKAG 720
+ +R M EK K S I K H F + DK H + +IY+ L+ ++ + AG
Sbjct: 565 DVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAG 624
Query: 721 YVPDTSFVLHEVEEHQKKDFLFYHSAKLAATYGLLTTPAGQP------VRIVKNILTCGD 774
YVPD VL +VEE +KKD + +HS KLA +GL+ + +RIVKN+ C D
Sbjct: 625 YVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCED 684
Query: 775 CHSFLKYVSVVTRREIFLRDASGFHHFLNGQCSCKDYW 812
CH F K VS V REI +RD + FH + NG CSC+DYW
Sbjct: 685 CHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 166 bits (419), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 226/481 (46%), Gaps = 9/481 (1%)
Query: 60 SSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGF 119
S P + F + L++ I + R+R G ++ SF+ IL A ++ L G
Sbjct: 72 SPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 131
Query: 120 QIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVSWNTVISSVVNE 179
++H + K+ + FV M +Y ++Y +FDE+ H+D V+WNT+I
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGR-INYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 180 FEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHAIRIGLGANLSV 239
++AF+LF +MK D+ D + +++AC + RA++ I + + +
Sbjct: 191 GLVDEAFKLFEEMK-DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 240 NNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAVEIFDKMPEKNS 299
AL+ Y G + +M V ++ T ++ Y + G +D A IFD+ +K+
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 300 VSYNALLAGYCKNGKAMEALGLFVKLLEEGLVLTEFTLTSVVNACGLIMEAKLSEQIHGF 359
V + +++ Y ++ EAL +F ++ G+ ++ SV++AC + ++ +H
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 360 VMKFGLGSNDCIEAALLDMLTRCGRMADAEKMFYRWPTDRDDSIIWTSMICGYARSGKPE 419
+ GL S I AL++M +CG + +F + P R + + W+SMI + G+
Sbjct: 370 IHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP--RRNVVSWSSMINALSMHGEAS 427
Query: 420 HAILLFHQSQSEATVVPDEIALTSVLGVCGTLGFHEMGKQIH-SYALKTGFSSDLGVANS 478
A+ LF + + E V P+E+ VL C G E GK+I S + + L
Sbjct: 428 DALSLFARMKQE-NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGC 486
Query: 479 MVSMYFKCCNMSNAIKAFNKMP-SHDIVSWNGLIAGHLLHRQGDEALAVWSSMEKASIKP 537
MV ++ + + A++ MP + ++V W L++ +H G+ L +++ ++P
Sbjct: 487 MVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFAAKRILELEP 544
Query: 538 D 538
D
Sbjct: 545 D 545
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 160/344 (46%), Gaps = 37/344 (10%)
Query: 20 IHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGR 79
+H K+ D + Y G + A +F +S +VV++ ++I + G
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 80 EEEAIELFFRMRSEGIVPNEHSFVAILTACIR-------------LLELELGFQIHAL-- 124
+EA +LF M+ ++P+E I++AC R L+E ++ H L
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 125 IVKM----GCVD------------SVFVTNALMGLYGKFSFCLDYLLKLFDELPHKDTVS 168
+V M GC+D ++FV+ A++ Y K LD +FD+ KD V
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGR-LDDAQVIFDQTEKKDLVC 311
Query: 169 WNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVLMEGRAVHAHA 228
W T+IS+ V ++A +F +M +G D ++ ++++AC +L + + VH+
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMC-CSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 229 IRIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPVMDIITLTEIIIAYMEFGYVDLAV 288
GL + LS+NNALI Y KCG + + E+MP ++++ + +I A G A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 289 EIFDKMP----EKNSVSYNALLAGYCKNGKAMEALGLFVKLLEE 328
+F +M E N V++ +L G +G E +F + +E
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDE 474
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 3/228 (1%)
Query: 39 LISAYLKLGHVADAYKIFYGLSSPNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPN 98
++S Y K G + DA IF ++V +T++IS + +EA+ +F M GI P+
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPD 343
Query: 99 EHSFVAILTACIRLLELELGFQIHALIVKMGCVDSVFVTNALMGLYGKFSFCLDYLLKLF 158
S ++++AC L L+ +H+ I G + + NAL+ +Y K LD +F
Sbjct: 344 VVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG-GLDATRDVF 402
Query: 159 DELPHKDTVSWNTVISSVVNEFEYEKAFELFRDMKRDNGFTVDYFTISTLLTACTGCFVL 218
+++P ++ VSW+++I+++ E A LF MK++N + T +L C+ ++
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN-VEPNEVTFVGVLYGCSHSGLV 461
Query: 219 MEGRAVHAHAI-RIGLGANLSVNNALIGFYTKCGRVKDVVALLERMPV 265
EG+ + A + L ++ + + +++ + ++E MPV
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPV 509
Score = 66.6 bits (161), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 13/181 (7%)
Query: 2 FNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYLKLGHVADAYKIFYGLSS 61
F+ + G + AK +H+ + LE + N LI+ Y K G + +F +
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 62 PNVVSFTSLISGLAKLGREEEAIELFFRMRSEGIVPNEHSFVAILTACIRLLELELGFQI 121
NVVS++S+I+ L+ G +A+ LF RM+ E + PNE +FV +L C +E G +I
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 122 HALIVKMGCVDSVFVTNAL------MGLYGKFSFCLDYLLKLFDELP-HKDTVSWNTVIS 174
A + D +T L + L+G+ + L L++ + +P + V W +++S
Sbjct: 468 FASM-----TDEYNITPKLEHYGCMVDLFGRANL-LREALEVIESMPVASNVVIWGSLMS 521
Query: 175 S 175
+
Sbjct: 522 A 522
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,960,404
Number of Sequences: 539616
Number of extensions: 11897840
Number of successful extensions: 46410
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 35525
Number of HSP's gapped (non-prelim): 2938
length of query: 812
length of database: 191,569,459
effective HSP length: 126
effective length of query: 686
effective length of database: 123,577,843
effective search space: 84774400298
effective search space used: 84774400298
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)