BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040322
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis
PE=1 SV=1
Length = 493
Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 106/172 (61%), Gaps = 10/172 (5%)
Query: 20 TVFDMIPADMVVNAMIVAMVAHARQSSYVN--IYRVGSSLRNPVTFMNVLDYSFDYFTKK 77
T+ D+IPADMVVNA IVAMVAHA Q YV Y VGSS NP+ + + + YFTK
Sbjct: 305 TIIDLIPADMVVNATIVAMVAHANQR-YVEPVTYHVGSSAANPMKLSALPEMAHRYFTKN 363
Query: 78 SWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQYFEGM 137
WI+ PV V + ++FS FH Y+ + +LLPLK+ NT+ CQ+F+G
Sbjct: 364 PWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKVLEIA-------NTIFCQWFKGK 416
Query: 138 LTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRENMMETDIFSF 189
+RKT ++ LV+IY P+L FDD NTEKLR+A +E+++E D+F F
Sbjct: 417 YMDLKRKTRLLLRLVDIYKPYLFFQGIFDDMNTEKLRIAAKESIVEADMFYF 468
>sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2
SV=1
Length = 491
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76
D+ +VFD+IPADMVVNAM+ A AH+ + IY VGSS +NPVTF + D++ YF K
Sbjct: 299 DSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAK 358
Query: 77 KSWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQYFEG 136
+ I G P+ V K I S M F YM ++Y LPL++ Y W +
Sbjct: 359 RPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQILRLINIVYPWSHG-------D 411
Query: 137 MLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRENMMETD 185
+ RK M LVE+Y P+LL FDD NTE+LRM +EN+ E D
Sbjct: 412 NYSDLSRKIKLAMRLVELYQPYLLFKGIFDDLNTERLRMKRKENIKELD 460
>sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2
SV=1
Length = 493
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 8/173 (4%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76
D + V D++PADMVVN+++V+M A A + + IY VGSSLRNP+ + ++ YF+
Sbjct: 305 DLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSLRNPMKNSKFPELAYRYFSI 363
Query: 77 KSWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQYFEG 136
K W + GK VKV + I S M FH YM I+YL+ LK N + C+ FE
Sbjct: 364 KPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALK-------GLELVNIILCKLFEK 416
Query: 137 MLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRENMMETDIFSF 189
+K NF+ LV++Y P+L FDD NTEKLR + +E ++F F
Sbjct: 417 EFQYFNKKINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYF 469
>sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4
PE=2 SV=1
Length = 493
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76
D +V D+IP DMV NAM+ A HA + +Y VGSS +NP+TF + D + YFTK
Sbjct: 301 DPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTK 360
Query: 77 KSWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQYFEG 136
+ G + V+K I S M F YM ++Y LPL++ Y W N + +
Sbjct: 361 NPLVRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDID- 419
Query: 137 MLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRE 179
RK M LV++Y P++L FDD NTEKLR+ +E
Sbjct: 420 ------RKIKLAMRLVDLYRPYVLFKGIFDDTNTEKLRLKRKE 456
>sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5
PE=2 SV=1
Length = 496
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76
D +V DMIP DMV NAMI A HA S +Y VGSS +NPVTF + + + YFTK
Sbjct: 302 DVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYFTK 361
Query: 77 KSWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQYFEG 136
G + V+KV M F YM ++Y LPL+L Y W+N +Y +
Sbjct: 362 NPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNG--DKYGD- 418
Query: 137 MLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRE 179
+ RK VM LVE+Y P++L FDDRNT+ L +E
Sbjct: 419 ----KNRKIELVMRLVELYEPYVLFKGIFDDRNTKSLCANQKE 457
>sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7
PE=3 SV=1
Length = 409
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76
D +TV D+IP DMVVNAMI H S +Y VGSS +NPV + + + YF K
Sbjct: 228 DQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYEMMSRYFMK 287
Query: 77 KSWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQYFEG 136
+ G + V KV S + F Y ++Y LP+++ G ++
Sbjct: 288 SPLVGRNGMLI-VPKVTRISTLARFRVYTNLRYKLPIQILGLL--------SVISLSQRD 338
Query: 137 MLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRENMME 183
RK M LV++Y P++L FDD+N E LR+ ME
Sbjct: 339 KFALHNRKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEAKDME 385
>sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2
SV=1
Length = 496
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76
D +V DMIPADMV NAMI A HA S +Y+VGSS +NP+ + + + F YFTK
Sbjct: 302 DVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTK 361
Query: 77 KSWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQYFEG 136
S G + V+K+ + + F YM I+Y LP++L D + + +Y
Sbjct: 362 NSLRSRNGSMITVSKMKLIPTLALFSLYMTIRYKLPVQLLKLV--DIIYPSREGDEY--- 416
Query: 137 MLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRE 179
+ RK + VM LV++Y P++L FDDRNT+ L +E
Sbjct: 417 --KNKNRKIDMVMRLVKLYEPYVLFKGIFDDRNTKNLCAKQKE 457
>sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2
SV=2
Length = 616
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSS----YVNIYRVGSSLRNPVTFMNVLDYSFD 72
D + V D++PADMVVNA + A+ H S +N+Y++ SS NP+ F ++ + ++
Sbjct: 421 DPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDLAELLYN 480
Query: 73 YFTKKSWIDNTGKPVKVTKVIIFSRMVGF--HGYMKIQYLLPLKLSGFTCRDYNWQNTL- 129
++ +D+ G P+ V + +F+ + F H + Q L +SG + D L
Sbjct: 481 HYKTSPCMDSKGDPIMVRLMKLFNSVDDFSDHLWRDAQERSGL-MSGMSSVDSKMMQKLK 539
Query: 130 -CCQYFEGMLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRENMMETDIFS 188
C ++ L IY P+ FD+ NT++L ENM E +
Sbjct: 540 FIC----------KKSVEQAKHLATIYEPYTFYGGRFDNSNTQRL----MENMSEDEKRE 585
Query: 189 F 189
F
Sbjct: 586 F 586
>sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana
GN=FAR6 PE=2 SV=1
Length = 548
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 75/182 (41%), Gaps = 26/182 (14%)
Query: 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLR-NPVTFMNVLDYSFDYFT 75
D +++ D+IP DMV NA I AM H +Y + SS NP+ ++D S +
Sbjct: 364 DPQSLMDIIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDLSHQHLC 423
Query: 76 KKSWIDNTGKPVKVTKVIIFSRMVGFHGYMKIQYLLPLKLSGFTCRDYNW---QNTLCCQ 132
P++ T + + +MKI L GFT N Q +
Sbjct: 424 D--------FPLEETVIDL--------EHMKIHS----SLEGFTSALSNTIIKQERVIDN 463
Query: 133 YFEGMLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTEKLRMATRENMMETDIFSFILS 192
G+ T +RK N+ + L + Y P+ A FD+ NT L +M E F F +
Sbjct: 464 EGGGLSTKGKRKLNYFVSLAKTYEPYTFFQARFDNTNTTSL--IQEMSMEEKKTFGFDIK 521
Query: 193 AL 194
+
Sbjct: 522 GI 523
>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster
GN=CG5065 PE=3 SV=1
Length = 625
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 21 VFDMIPADMVVNAMIVAMVAHA-RQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76
V DM+P D+V+N MI A A R+S+ + IY + RNP+ + + ++ K
Sbjct: 387 VADMVPVDIVINLMIAAAWRTATRKSNNLLIYNCCTGQRNPIIWSEFVKHAMTSVRK 443
>sp|O74962|PANK_SCHPO Pantothenate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPBC4B4.01c PE=1 SV=1
Length = 403
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 15 FRDTETVFDMIPADMVVNAMI-----VAMVA--HARQSSYVNIYRVGSSLRNPVTFMNVL 67
FR+ + + + P D+ + ++ + +A HA++ + NIY GS +RN V M+ L
Sbjct: 298 FRERKPLEEFAPQDISRSLLLAISNNIGQIAYLHAQKHNVQNIYFGGSFIRNHVQTMHTL 357
Query: 68 DYSFDYFTKKS 78
Y+ Y++ +
Sbjct: 358 TYAIQYWSNHT 368
>sp|Q96JK4|HIPL1_HUMAN HHIP-like protein 1 OS=Homo sapiens GN=HHIPL1 PE=2 SV=2
Length = 782
Score = 30.4 bits (67), Expect = 7.5, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSF 71
Y + DT+ F + + +N+ + +VA A+ + + V + LRNPV ++ D +
Sbjct: 148 YLSLDDTDYCFPYLLVNKNLNSNLGHVVADAKGCLQLCLEEVANGLRNPVAMVHARDGTH 207
Query: 72 DYFTKKS----WI-----DNTGKP-VKVTKVIIFSRMVG-FHGYMKIQY 109
+F + W GKP + +++V++ S G G++ I +
Sbjct: 208 RFFVAEQVGLVWAYLPDRSRLGKPFLNISRVVLTSPWEGDERGFLGIAF 256
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,976,413
Number of Sequences: 539616
Number of extensions: 2786381
Number of successful extensions: 6621
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6599
Number of HSP's gapped (non-prelim): 12
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)