Query 040322
Match_columns 200
No_of_seqs 122 out of 722
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 11:31:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dqv_A Probable peptide synthe 95.7 0.014 4.7E-07 51.5 5.9 55 19-73 323-378 (478)
2 3st7_A Capsular polysaccharide 93.7 0.0043 1.5E-07 52.4 -2.8 132 16-171 162-295 (369)
3 1orr_A CDP-tyvelose-2-epimeras 92.3 0.17 5.9E-06 41.5 5.2 62 13-76 228-289 (347)
4 3ruf_A WBGU; rossmann fold, UD 92.2 0.27 9.2E-06 40.6 6.3 62 12-77 233-294 (351)
5 4b8w_A GDP-L-fucose synthase; 91.8 0.23 7.8E-06 39.9 5.2 60 12-75 204-263 (319)
6 3ko8_A NAD-dependent epimerase 91.1 0.48 1.7E-05 38.3 6.5 63 13-77 192-254 (312)
7 1rkx_A CDP-glucose-4,6-dehydra 90.9 0.3 1E-05 40.5 5.3 60 16-75 224-284 (357)
8 3ehe_A UDP-glucose 4-epimerase 90.7 0.38 1.3E-05 39.1 5.6 58 13-76 193-250 (313)
9 3slg_A PBGP3 protein; structur 90.0 0.5 1.7E-05 39.4 5.8 64 12-77 233-296 (372)
10 4b4o_A Epimerase family protei 89.9 0.7 2.4E-05 37.3 6.6 58 13-76 181-238 (298)
11 3enk_A UDP-glucose 4-epimerase 89.1 0.87 3E-05 37.2 6.6 57 17-76 230-286 (341)
12 4egb_A DTDP-glucose 4,6-dehydr 88.9 0.79 2.7E-05 37.6 6.2 59 12-76 228-286 (346)
13 1gy8_A UDP-galactose 4-epimera 88.8 0.94 3.2E-05 37.9 6.7 57 17-75 265-326 (397)
14 1e6u_A GDP-fucose synthetase; 88.7 0.64 2.2E-05 37.7 5.4 61 13-75 200-265 (321)
15 1i24_A Sulfolipid biosynthesis 88.4 0.57 2E-05 39.3 5.1 57 13-73 264-320 (404)
16 3m2p_A UDP-N-acetylglucosamine 88.0 0.65 2.2E-05 37.6 5.1 59 12-76 187-245 (311)
17 2bll_A Protein YFBG; decarboxy 87.7 1.1 3.7E-05 36.6 6.2 63 13-77 211-273 (345)
18 1sb8_A WBPP; epimerase, 4-epim 87.4 0.95 3.2E-05 37.4 5.8 58 13-74 236-293 (352)
19 4id9_A Short-chain dehydrogena 87.1 1.4 4.9E-05 36.0 6.7 58 13-75 231-292 (347)
20 1t2a_A GDP-mannose 4,6 dehydra 86.9 1.2 4E-05 37.1 6.1 56 13-75 239-294 (375)
21 2c20_A UDP-glucose 4-epimerase 86.9 1.5 5.3E-05 35.5 6.8 56 17-75 217-272 (330)
22 1rpn_A GDP-mannose 4,6-dehydra 86.8 1 3.4E-05 36.8 5.6 55 14-75 222-276 (335)
23 1db3_A GDP-mannose 4,6-dehydra 85.2 0.98 3.3E-05 37.4 4.8 55 14-75 216-270 (372)
24 3gpi_A NAD-dependent epimerase 85.1 2 6.9E-05 34.2 6.5 59 15-76 175-233 (286)
25 2b69_A UDP-glucuronate decarbo 85.1 1.4 4.8E-05 36.1 5.7 57 13-76 227-283 (343)
26 4f6l_B AUSA reductase domain p 84.8 0.42 1.4E-05 42.1 2.4 51 17-73 373-423 (508)
27 2ydy_A Methionine adenosyltran 84.7 3.1 0.0001 33.5 7.5 58 17-76 188-245 (315)
28 1eq2_A ADP-L-glycero-D-mannohe 83.4 1.1 3.7E-05 36.0 4.2 55 14-75 200-255 (310)
29 3sxp_A ADP-L-glycero-D-mannohe 83.2 1.4 4.6E-05 36.6 4.8 56 13-75 218-273 (362)
30 1ek6_A UDP-galactose 4-epimera 82.7 3.1 0.0001 34.0 6.8 56 17-75 234-289 (348)
31 2q1s_A Putative nucleotide sug 82.7 1.4 4.8E-05 36.9 4.7 56 14-76 250-306 (377)
32 4f6c_A AUSA reductase domain p 82.5 0.62 2.1E-05 39.8 2.5 50 17-72 292-341 (427)
33 2v6g_A Progesterone 5-beta-red 82.3 1.7 5.9E-05 35.7 5.1 58 14-76 212-272 (364)
34 2x6t_A ADP-L-glycero-D-manno-h 82.3 1.9 6.5E-05 35.5 5.4 56 14-76 247-303 (357)
35 2c5a_A GDP-mannose-3', 5'-epim 81.7 2 6.8E-05 36.0 5.3 56 13-75 236-291 (379)
36 3i6i_A Putative leucoanthocyan 81.7 1.8 6.3E-05 35.6 5.0 60 12-75 183-242 (346)
37 1oc2_A DTDP-glucose 4,6-dehydr 81.5 2.5 8.5E-05 34.5 5.7 58 13-76 216-273 (348)
38 1r6d_A TDP-glucose-4,6-dehydra 81.2 2.3 7.8E-05 34.6 5.4 58 13-76 206-263 (337)
39 2yy7_A L-threonine dehydrogena 80.5 1.3 4.4E-05 35.6 3.6 58 14-74 203-260 (312)
40 3ius_A Uncharacterized conserv 80.5 4.8 0.00016 31.8 7.0 54 17-76 175-228 (286)
41 3vps_A TUNA, NAD-dependent epi 80.0 2.7 9.3E-05 33.7 5.4 54 13-74 199-252 (321)
42 1n7h_A GDP-D-mannose-4,6-dehyd 79.1 3.5 0.00012 34.2 6.0 55 14-75 245-299 (381)
43 2hun_A 336AA long hypothetical 79.0 2.7 9.2E-05 34.1 5.2 57 14-76 207-263 (336)
44 1z45_A GAL10 bifunctional prot 78.6 3.5 0.00012 37.6 6.2 58 17-76 241-301 (699)
45 1udb_A Epimerase, UDP-galactos 77.8 3.9 0.00013 33.2 5.8 56 17-75 226-281 (338)
46 2pk3_A GDP-6-deoxy-D-LYXO-4-he 77.5 4.3 0.00015 32.6 5.9 57 13-75 212-268 (321)
47 1kew_A RMLB;, DTDP-D-glucose 4 77.1 3.5 0.00012 33.8 5.3 57 14-76 223-279 (361)
48 1z7e_A Protein aRNA; rossmann 76.4 3.7 0.00013 37.3 5.7 62 13-76 526-587 (660)
49 1n2s_A DTDP-4-, DTDP-glucose o 75.3 5.7 0.0002 31.5 6.0 56 19-76 181-236 (299)
50 2jl1_A Triphenylmethane reduct 75.0 4.8 0.00016 31.7 5.5 56 15-75 163-218 (287)
51 3oh8_A Nucleoside-diphosphate 74.9 1.8 6.2E-05 38.2 3.1 56 14-75 329-384 (516)
52 2hrz_A AGR_C_4963P, nucleoside 74.6 2.9 9.9E-05 34.1 4.2 59 14-75 225-283 (342)
53 3ajr_A NDP-sugar epimerase; L- 74.6 2.6 9E-05 33.9 3.8 58 14-74 197-254 (317)
54 2z1m_A GDP-D-mannose dehydrata 74.3 5.8 0.0002 32.0 5.9 55 14-75 211-265 (345)
55 1vl0_A DTDP-4-dehydrorhamnose 71.8 8.5 0.00029 30.4 6.2 50 19-75 189-238 (292)
56 3sc6_A DTDP-4-dehydrorhamnose 71.3 6.2 0.00021 31.1 5.3 51 19-76 183-233 (287)
57 2q1w_A Putative nucleotide sug 68.9 4.6 0.00016 32.9 4.1 52 18-76 215-266 (333)
58 2zcu_A Uncharacterized oxidore 68.1 11 0.00039 29.4 6.2 56 15-75 159-214 (286)
59 2p5y_A UDP-glucose 4-epimerase 67.5 11 0.00037 30.1 6.0 52 16-75 209-260 (311)
60 2pzm_A Putative nucleotide sug 62.1 6.8 0.00023 31.8 3.8 55 14-76 209-264 (330)
61 2x4g_A Nucleoside-diphosphate- 61.5 7.6 0.00026 31.4 4.0 51 18-75 210-260 (342)
62 2ggs_A 273AA long hypothetical 60.5 16 0.00055 28.3 5.7 47 21-75 180-226 (273)
63 1xq6_A Unknown protein; struct 59.0 5.6 0.00019 30.4 2.7 49 22-73 200-249 (253)
64 3e48_A Putative nucleoside-dip 54.4 19 0.00064 28.3 5.2 57 13-75 160-216 (289)
65 1xgk_A Nitrogen metabolite rep 54.1 15 0.00051 30.4 4.7 58 14-75 179-237 (352)
66 3nzo_A UDP-N-acetylglucosamine 50.3 34 0.0012 28.8 6.4 56 17-76 227-283 (399)
67 2c9l_Y EB1, zebra, BZLF1 trans 48.2 5.8 0.0002 24.3 0.9 26 166-199 37-62 (63)
68 3c1o_A Eugenol synthase; pheny 45.7 28 0.00094 27.8 4.9 60 12-75 177-236 (321)
69 1qyd_A Pinoresinol-lariciresin 43.1 20 0.00067 28.5 3.6 59 13-75 183-241 (313)
70 1qyc_A Phenylcoumaran benzylic 41.1 18 0.00061 28.7 3.0 60 12-75 177-236 (308)
71 2gas_A Isoflavone reductase; N 38.7 33 0.0011 27.0 4.3 60 12-75 176-235 (307)
72 3e8x_A Putative NAD-dependent 33.3 49 0.0017 25.0 4.4 49 16-70 186-234 (236)
73 2p4h_X Vestitone reductase; NA 32.6 66 0.0022 25.3 5.2 45 23-74 223-267 (322)
74 2r6j_A Eugenol synthase 1; phe 29.3 51 0.0017 26.2 4.0 59 13-75 177-235 (318)
75 3dqp_A Oxidoreductase YLBE; al 27.6 84 0.0029 23.3 4.8 44 19-68 166-209 (219)
76 2gn4_A FLAA1 protein, UDP-GLCN 22.2 1.1E+02 0.0039 24.7 4.9 50 16-72 210-259 (344)
77 3dhn_A NAD-dependent epimerase 20.6 1.1E+02 0.0036 22.7 4.1 39 21-64 188-226 (227)
78 2rlw_A PLNF; toxin; NMR {Lacto 20.5 49 0.0017 17.5 1.4 11 24-34 18-28 (34)
No 1
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=95.74 E-value=0.014 Score=51.51 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=44.1
Q ss_pred CcccccchHHHHHHHHHHHHHHhhh-cCCCceEEEeecCCCCcccHHHHHHHHHHH
Q 040322 19 ETVFDMIPADMVVNAMIVAMVAHAR-QSSYVNIYRVGSSLRNPVTFMNVLDYSFDY 73 (200)
Q Consensus 19 ~~~~DiVPVD~VvNamI~aa~~~~~-~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~ 73 (200)
+...|.||||.|+.+++.++..... ......+||++++..+|++|.++.+.+.++
T Consensus 323 ~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 323 RAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp CCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred cceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 6788999999999999888764221 123457999999887889999999998875
No 2
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=93.66 E-value=0.0043 Score=52.43 Aligned_cols=132 Identities=12% Similarity=0.087 Sum_probs=76.0
Q ss_pred ecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhcCCCCCCCCCceeeeeeEEe
Q 040322 16 RDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTKKSWIDNTGKPVKVTKVIIF 95 (200)
Q Consensus 16 ~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~~P~~~~~g~~~~~p~~~~~ 95 (200)
.+++...+.|+||-|+++++.++..... ....+||++++ .++||+++.+.+.+....... +..|..
T Consensus 162 ~~~~~~~~~i~v~Dva~~~~~~l~~~~~--~~~~~~~i~~~--~~~s~~e~~~~~~~~~g~~~~-------~~~~~~--- 227 (369)
T 3st7_A 162 NDRNVELTLNYVDDIVAEIKRAIEGTPT--IENGVPTVPNV--FKVTLGEIVDLLYKFKQSRLD-------RTLPKL--- 227 (369)
T ss_dssp SCTTCEEEEEEHHHHHHHHHHHHHTCCC--EETTEECCSCC--EEEEHHHHHHHHHHHHHHHHH-------TCCCCT---
T ss_pred cCCCeEEEEEEHHHHHHHHHHHHhCCcc--cCCceEEeCCC--CceeHHHHHHHHHHHhCCCcc-------cccCCC---
Confidence 4788889999999999999887753211 11479999875 789999999999887543211 111211
Q ss_pred cChhHHHHHHHHHhhchhhhhccccccchhhHhhhhh--hhhhhHHHHHHHHhhHHHHHHhccCcccceEEEeChhHH
Q 040322 96 SRMVGFHGYMKIQYLLPLKLSGFTCRDYNWQNTLCCQ--YFEGMLTGRRRKTNFVMPLVEIYGPHLLSNATFDDRNTE 171 (200)
Q Consensus 96 ~~~~~~~~~~~l~~~lPa~l~D~~~~~~~~~~~~~~~--~~~~~~~k~~rki~~~~~~~~~~~~Ft~~~w~F~~~N~~ 171 (200)
.......+....+.++|..-++. .+..... |.-..+.+...+.. .......+++.+.|+|.+.|.+
T Consensus 228 ~~~~~~~l~~~~l~~~p~~~~~~-------~l~~~~D~rg~f~e~~~~~~~~q---~~ls~~~~g~~rg~h~h~~~~e 295 (369)
T 3st7_A 228 DNLFEKDLYSTYLSYLPSTDFSY-------PLLMNVDDRGSFTEFIKTPDRGQ---VSVNISKPGITKGNHWHHTKNE 295 (369)
T ss_dssp TSHHHHHHHHHHHHTSCTTCSCC-------CCCEEEETTEEEEEEEECSSSCE---EEEEEECTTCEEEEEECSSCCE
T ss_pred CCHHHHHHHHHHhcccCCcceee-------chhhccCCCcceeEEEecCCCce---EEEEEecCCceeccccccCcce
Confidence 12222234443455667655444 2100000 00011111111211 3456678999999999986544
No 3
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=92.32 E-value=0.17 Score=41.53 Aligned_cols=62 Identities=15% Similarity=0.288 Sum_probs=47.8
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
..+++.+...|.|.||-|+++++.++.. ... ....+||++++..+++++.++.+.+.+.+..
T Consensus 228 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~-~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~ 289 (347)
T 1orr_A 228 TISGNGKQVRDVLHAEDMISLYFTALAN-VSK-IRGNAFNIGGTIVNSLSLLELFKLLEDYCNI 289 (347)
T ss_dssp EEESSSCCEEECEEHHHHHHHHHHHHHT-HHH-HTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred EEecCCcceEeeEEHHHHHHHHHHHHhc-ccc-CCCCEEEeCCCCCCCccHHHHHHHHHHHhCC
Confidence 3567888889999999999998877642 111 1235999998876789999999999887643
No 4
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.19 E-value=0.27 Score=40.62 Aligned_cols=62 Identities=26% Similarity=0.307 Sum_probs=48.8
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhcC
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTKK 77 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~~ 77 (200)
..++++++...|.|.||-|+.+++.++..... ....+||++++ .++++.++.+.+.+.+...
T Consensus 233 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 294 (351)
T 3ruf_A 233 VYINGDGETSRDFCYIDNVIQMNILSALAKDS--AKDNIYNVAVG--DRTTLNELSGYIYDELNLI 294 (351)
T ss_dssp CEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--GCSEEEEESCS--CCEEHHHHHHHHHHHHHTT
T ss_pred cEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc--cCCCEEEeCCC--CcccHHHHHHHHHHHhCcc
Confidence 35678889999999999999998877653111 23579999986 4899999999999887663
No 5
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=91.75 E-value=0.23 Score=39.93 Aligned_cols=60 Identities=10% Similarity=0.056 Sum_probs=47.4
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++++...|+|.||-|+.+++.++.... .....+||++++ .++++.++.+.+.+.+.
T Consensus 204 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 263 (319)
T 4b8w_A 204 LTVWGTGNPRRQFIYSLDLAQLFIWVLREYN--EVEPIILSVGEE--DEVSIKEAAEAVVEAMD 263 (319)
T ss_dssp EEEESCSCCEECEEEHHHHHHHHHHHHHHCC--CSSCEEECCCGG--GCEEHHHHHHHHHHHTT
T ss_pred eEEeCCCCeeEEEEeHHHHHHHHHHHHhccc--cCCceEEEecCC--CceeHHHHHHHHHHHhC
Confidence 3567888999999999999999887765321 123569999885 58999999999988764
No 6
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=91.06 E-value=0.48 Score=38.29 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=45.0
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhcC
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTKK 77 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~~ 77 (200)
...++++...|.|.||-|+++++.++-..........+||++++ .++++.++.+.+.+.+...
T Consensus 192 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~~ 254 (312)
T 3ko8_A 192 EVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNV--DAVRVLDIAQIVAEVLGLR 254 (312)
T ss_dssp EEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCS--SCEEHHHHHHHHHHHHTCC
T ss_pred EEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCC--CceeHHHHHHHHHHHhCCC
Confidence 35678888899999999999988776542111234579999885 5899999999999876543
No 7
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=90.94 E-value=0.3 Score=40.47 Aligned_cols=60 Identities=8% Similarity=0.168 Sum_probs=44.7
Q ss_pred ecCCcccccchHHHHHHHHHHHHHHhhhc-CCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 16 RDTETVFDMIPADMVVNAMIVAMVAHARQ-SSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 16 ~d~~~~~DiVPVD~VvNamI~aa~~~~~~-~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
.+++...|.|.||-|+++++.++...... .....+||++++...++++.++.+.+.+.+.
T Consensus 224 ~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g 284 (357)
T 1rkx_A 224 RNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWG 284 (357)
T ss_dssp SCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred CCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhC
Confidence 35677889999999999988776532111 1224699998875678999999999988764
No 8
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=90.71 E-value=0.38 Score=39.06 Aligned_cols=58 Identities=17% Similarity=0.248 Sum_probs=46.6
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.+.++++...|.|.||-|+++++.++- ......+||++++ .++++.++.+.+.+.+..
T Consensus 193 ~~~~~g~~~~~~i~v~Dva~a~~~~~~----~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 250 (313)
T 3ehe_A 193 EILGNGEQNKSYIYISDCVDAMLFGLR----GDERVNIFNIGSE--DQIKVKRIAEIVCEELGL 250 (313)
T ss_dssp EESTTSCCEECCEEHHHHHHHHHHHTT----CCSSEEEEECCCS--CCEEHHHHHHHHHHHTTC
T ss_pred EEeCCCCeEEeEEEHHHHHHHHHHHhc----cCCCCceEEECCC--CCeeHHHHHHHHHHHhCC
Confidence 467888899999999999999887764 1234579999885 589999999999887644
No 9
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=89.97 E-value=0.5 Score=39.38 Aligned_cols=64 Identities=9% Similarity=0.093 Sum_probs=48.8
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhcC
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTKK 77 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~~ 77 (200)
..++++++...+.|.||-|+++++.++..... .....+||++++ ..++++.++.+.+.+.+...
T Consensus 233 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~ni~~~-~~~~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 233 ISLVDGGSQKRAFTYVDDGISALMKIIENSNG-VATGKIYNIGNP-NNNFSVRELANKMLELAAEF 296 (372)
T ss_dssp EEEGGGGCCEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECCT-TCEEEHHHHHHHHHHHHHHC
T ss_pred cEEeCCCceEEEEEEHHHHHHHHHHHHhcccC-cCCCceEEeCCC-CCCccHHHHHHHHHHHhCCC
Confidence 34567788899999999999998877653221 123579999884 35899999999999887654
No 10
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.93 E-value=0.7 Score=37.26 Aligned_cols=58 Identities=9% Similarity=-0.016 Sum_probs=45.5
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
...++++...+.|=||-|+++++.++... ....+||++++ +|+|+.++.+.+.+...+
T Consensus 181 ~~~g~g~~~~~~ihv~Dva~a~~~~~~~~----~~~g~yn~~~~--~~~t~~e~~~~ia~~lgr 238 (298)
T 4b4o_A 181 GPIGSGHQFFPWIHIGDLAGILTHALEAN----HVHGVLNGVAP--SSATNAEFAQTFGAALGR 238 (298)
T ss_dssp CCBTTSCSBCCEEEHHHHHHHHHHHHHCT----TCCEEEEESCS--CCCBHHHHHHHHHHHHTC
T ss_pred ceecccCceeecCcHHHHHHHHHHHHhCC----CCCCeEEEECC--CccCHHHHHHHHHHHhCc
Confidence 34588899999999999999988766421 22359999884 799999999998887543
No 11
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.07 E-value=0.87 Score=37.23 Aligned_cols=57 Identities=18% Similarity=0.107 Sum_probs=44.8
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
+.+...|.|.||-|+++++.++...... ....+||++++ .++++.++.+.+.+....
T Consensus 230 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~-~~~~~~ni~~~--~~~s~~e~~~~i~~~~g~ 286 (341)
T 3enk_A 230 DGTGVRDYIHVVDLARGHIAALDALERR-DASLTVNLGTG--RGYSVLEVVRAFEKASGR 286 (341)
T ss_dssp TSSCEECEEEHHHHHHHHHHHHHHHHHH-TSCEEEEESCS--CCEEHHHHHHHHHHHHCS
T ss_pred CCCeeEeeEEHHHHHHHHHHHHHhhhcC-CcceEEEeCCC--CceeHHHHHHHHHHHhCC
Confidence 7788899999999999988777642111 23579999885 589999999999887543
No 12
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=88.90 E-value=0.79 Score=37.64 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=46.9
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
..++++++...|.|.||-|+.+++.++... ....+||++++ .++++.++.+.+.+.+..
T Consensus 228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 286 (346)
T 4egb_A 228 LPLYGDGLNVRDWLHVTDHCSAIDVVLHKG----RVGEVYNIGGN--NEKTNVEVVEQIITLLGK 286 (346)
T ss_dssp CEEETTSCCEECEEEHHHHHHHHHHHHHHC----CTTCEEEECCS--CCEEHHHHHHHHHHHHTC
T ss_pred ceeeCCCCeEEeeEEHHHHHHHHHHHHhcC----CCCCEEEECCC--CceeHHHHHHHHHHHhCC
Confidence 345688889999999999999988776532 13469999985 579999999999887654
No 13
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=88.76 E-value=0.94 Score=37.93 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=42.7
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcC--CCc---eEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQS--SYV---NIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~--~~~---~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
+.+...|+|.||-|+.+++.++....... ... .+||++++ .++++.++.+.+.+.+.
T Consensus 265 ~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 326 (397)
T 1gy8_A 265 DGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTG 326 (397)
T ss_dssp TSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred CCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCC--CcccHHHHHHHHHHHhC
Confidence 56788899999999999887765321110 013 79999875 58999999999988754
No 14
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=88.66 E-value=0.64 Score=37.72 Aligned_cols=61 Identities=11% Similarity=0.091 Sum_probs=45.6
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhc-----CCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQ-----SSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~-----~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
.++++.+...|.|.||-|+++++.++...... .....+||++++ .++++.++.+.+.+.+.
T Consensus 200 ~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 265 (321)
T 1e6u_A 200 VVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTG--VDCTIRELAQTIAKVVG 265 (321)
T ss_dssp EEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred EEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCC--CCccHHHHHHHHHHHhC
Confidence 35678888999999999999988776432110 001369999875 57999999999988754
No 15
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=88.39 E-value=0.57 Score=39.34 Aligned_cols=57 Identities=4% Similarity=0.040 Sum_probs=43.4
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHH
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDY 73 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~ 73 (200)
.++++.+...|.|.||-|+++++.++... .......+||+++ .++++.++.+.+.+.
T Consensus 264 ~~~g~g~~~~~~i~v~Dva~a~~~~l~~~-~~~g~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 264 TVYGKGGQTRGYLDIRDTVQCVEIAIANP-AKAGEFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp EEETTSCCEEEEEEHHHHHHHHHHHHHSC-CCTTCEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred EEeCCCCceECcEEHHHHHHHHHHHHhCc-ccCCCceEEEECC---CCCcHHHHHHHHHHH
Confidence 35678888999999999999988776421 1111126999976 479999999999886
No 16
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=88.05 E-value=0.65 Score=37.65 Aligned_cols=59 Identities=14% Similarity=0.182 Sum_probs=46.7
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
..++++++...+.|.||-|+.+++.++-. .....+||++++ .++++.++.+.+.+.+..
T Consensus 187 ~~~~g~~~~~~~~v~v~Dva~a~~~~~~~----~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 245 (311)
T 3m2p_A 187 LTLHANSVAKREFLYAKDAAKSVIYALKQ----EKVSGTFNIGSG--DALTNYEVANTINNAFGN 245 (311)
T ss_dssp EEESSBCCCCEEEEEHHHHHHHHHHHTTC----TTCCEEEEECCS--CEECHHHHHHHHHHHTTC
T ss_pred eEEecCCCeEEceEEHHHHHHHHHHHHhc----CCCCCeEEeCCC--CcccHHHHHHHHHHHhCC
Confidence 34557889999999999999998766532 114579999986 579999999999887654
No 17
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=87.67 E-value=1.1 Score=36.62 Aligned_cols=63 Identities=10% Similarity=0.062 Sum_probs=46.5
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhcC
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTKK 77 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~~ 77 (200)
.++++.+...+.|.||-|+++++.++..... .....+||++++ .+++++.++.+.+.+.+...
T Consensus 211 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~g~~~~i~~~-~~~~s~~e~~~~i~~~~g~~ 273 (345)
T 2bll_A 211 KLIDGGKQKRCFTDIRDGIEALYRIIENAGN-RCDGEIINIGNP-ENEASIEELGEMLLASFEKH 273 (345)
T ss_dssp EEGGGSCCEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECCT-TSEEEHHHHHHHHHHHHHTC
T ss_pred EEECCCCEEEEEEEHHHHHHHHHHHHhhccc-cCCCceEEeCCC-CCCCCHHHHHHHHHHHhCCC
Confidence 3457777888999999999998877643211 113479999875 34899999999998876543
No 18
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=87.42 E-value=0.95 Score=37.36 Aligned_cols=58 Identities=19% Similarity=0.165 Sum_probs=45.5
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYF 74 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~ 74 (200)
.++++++...+.|.||-|+++++.++..... ....+||++++ .++++.++.+.+.+.+
T Consensus 236 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~--~~~~~~ni~~~--~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 236 YINGDGETSRDFCYIENTVQANLLAATAGLD--ARNQVYNIAVG--GRTSLNQLFFALRDGL 293 (352)
T ss_dssp EEESSSCCEECCEEHHHHHHHHHHHHTCCGG--GCSEEEEESCS--CCEEHHHHHHHHHHHH
T ss_pred EEeCCCCceEeeEEHHHHHHHHHHHHhcccc--CCCceEEeCCC--CCccHHHHHHHHHHHH
Confidence 3567888889999999999998876643111 23479999886 5899999999998876
No 19
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.12 E-value=1.4 Score=36.04 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=46.5
Q ss_pred eeeecCCccccc----chHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDM----IPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~Di----VPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
.++++.+...|. |.||-|+.+++.++-... ....+||++++ .++++.++.+.+.+.+.
T Consensus 231 ~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 292 (347)
T 4id9_A 231 HILARNENGRPFRMHITDTRDMVAGILLALDHPE---AAGGTFNLGAD--EPADFAALLPKIAALTG 292 (347)
T ss_dssp EEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG---GTTEEEEESCS--SCEEHHHHHHHHHHHHC
T ss_pred EEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc---cCCCeEEECCC--CcccHHHHHHHHHHHhC
Confidence 567788888899 999999999887765321 12469999886 58999999999988764
No 20
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=86.92 E-value=1.2 Score=37.14 Aligned_cols=56 Identities=13% Similarity=0.119 Sum_probs=44.3
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
...++.+...|.|.||-|+++++.++-. . ...+||++++ .++++.++.+.+.+.+.
T Consensus 239 ~~~g~~~~~~~~i~v~Dva~a~~~~~~~----~-~~~~~ni~~~--~~~s~~e~~~~i~~~~g 294 (375)
T 1t2a_A 239 FSLGNLDAKRDWGHAKDYVEAMWLMLQN----D-EPEDFVIATG--EVHSVREFVEKSFLHIG 294 (375)
T ss_dssp EEESCTTCEECCEEHHHHHHHHHHHHHS----S-SCCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred eEeCCCCceeeeEEHHHHHHHHHHHHhc----C-CCceEEEeCC--CcccHHHHHHHHHHHhC
Confidence 3567888899999999999998876532 1 2368999875 57999999999888654
No 21
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=86.88 E-value=1.5 Score=35.51 Aligned_cols=56 Identities=16% Similarity=0.258 Sum_probs=42.8
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
+.+...|.|.||-|+.+++.++..... .....+||++++ .++++.++.+.+.+.+.
T Consensus 217 ~g~~~~~~v~v~Dva~a~~~~~~~~~~-~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 272 (330)
T 2c20_A 217 DGTCIRDYIHVEDLVAAHFLGLKDLQN-GGESDFYNLGNG--NGFSVKEIVDAVREVTN 272 (330)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHHT-TCCCEEEECCCT--TCBCHHHHHHHHHHHTT
T ss_pred CCceeEeeEeHHHHHHHHHHHHhcccc-CCCCCeEEeCCC--CCccHHHHHHHHHHHhC
Confidence 567788999999999998877653221 112479999875 58999999999988754
No 22
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=86.81 E-value=1 Score=36.76 Aligned_cols=55 Identities=16% Similarity=0.145 Sum_probs=44.1
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++...|.|.||-|+++++.++-. . ...+||++++ .++++.++.+.+.+.+.
T Consensus 222 ~~g~g~~~~~~i~v~Dva~a~~~~~~~----~-~~~~~ni~~~--~~~s~~e~~~~i~~~~g 276 (335)
T 1rpn_A 222 RLGNVDAKRDWGFAGDYVEAMWLMLQQ----D-KADDYVVATG--VTTTVRDMCQIAFEHVG 276 (335)
T ss_dssp EESCTTCEEECEEHHHHHHHHHHHHHS----S-SCCCEEECCS--CEEEHHHHHHHHHHTTT
T ss_pred EeCCCcceeceEEHHHHHHHHHHHHhc----C-CCCEEEEeCC--CCccHHHHHHHHHHHhC
Confidence 467888899999999999998877642 1 1369999875 58999999999988654
No 23
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=85.20 E-value=0.98 Score=37.41 Aligned_cols=55 Identities=5% Similarity=0.029 Sum_probs=43.6
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++...|.|.||-|+++++.++.. . ...+||++++ .++++.++.+.+.+.+.
T Consensus 216 ~~g~~~~~~~~i~v~Dva~a~~~~~~~----~-~~~~~ni~~~--~~~s~~e~~~~i~~~~g 270 (372)
T 1db3_A 216 YLGNMDSLRDWGHAKDYVKMQWMMLQQ----E-QPEDFVIATG--VQYSVRQFVEMAAAQLG 270 (372)
T ss_dssp EESCTTCEECCEEHHHHHHHHHHTTSS----S-SCCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred eecCCCceeeeeEHHHHHHHHHHHHhc----C-CCceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 567888899999999999998766531 1 2368999885 57999999999988754
No 24
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=85.13 E-value=2 Score=34.21 Aligned_cols=59 Identities=12% Similarity=0.120 Sum_probs=45.7
Q ss_pred eecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 15 FRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 15 ~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.++++...|.|.||-|+.+++.++..... .....+||++++ .++++.++.+.+.+.+..
T Consensus 175 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~-~~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~ 233 (286)
T 3gpi_A 175 WPARNAWTNRIHRDDGAAFIAYLIQQRSH-AVPERLYIVTDN--QPLPVHDLLRWLADRQGI 233 (286)
T ss_dssp SCSSBCEECEEEHHHHHHHHHHHHHHHTT-SCCCSEEEECCS--CCEEHHHHHHHHHHHTTC
T ss_pred CCCcCceeEEEEHHHHHHHHHHHHhhhcc-CCCCceEEEeCC--CCCCHHHHHHHHHHHcCC
Confidence 46778888999999999998877754311 123579999875 589999999999887654
No 25
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=85.08 E-value=1.4 Score=36.15 Aligned_cols=57 Identities=9% Similarity=0.106 Sum_probs=44.5
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.++++.+...+.|.||-|+++++.++.. ....+||++++ .++++.++.+.+.+.+..
T Consensus 227 ~~~~~~~~~~~~v~v~Dva~a~~~~~~~-----~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 283 (343)
T 2b69_A 227 TVYGSGSQTRAFQYVSDLVNGLVALMNS-----NVSSPVNLGNP--EEHTILEFAQLIKNLVGS 283 (343)
T ss_dssp EEESSSCCEEECEEHHHHHHHHHHHHTS-----SCCSCEEESCC--CEEEHHHHHHHHHHHHTC
T ss_pred eEcCCCCeEEeeEeHHHHHHHHHHHHhc-----CCCCeEEecCC--CCCcHHHHHHHHHHHhCC
Confidence 3567888889999999999998766531 12458999886 489999999999887643
No 26
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=84.82 E-value=0.42 Score=42.06 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=40.5
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHH
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDY 73 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~ 73 (200)
+.+...++||||.|+.+++.++... ....+||++++ ++++|.++.+.+.+.
T Consensus 373 ~g~~~~~~v~v~DvA~ai~~~~~~~----~~~~~~nl~~~--~~~s~~el~~~i~~~ 423 (508)
T 4f6l_B 373 MAEMPVDFSFVDTTARQIVALAQVN----TPQIIYHVLSP--NKMPVKSLLECVKRK 423 (508)
T ss_dssp GGGSEEECEEHHHHHHHHHHHTTBC----CSCSEEEESCS--CEEEHHHHHHHHHSS
T ss_pred ccCceEEEEcHHHHHHHHHHHHhCC----CCCCEEEeCCC--CCCCHHHHHHHHHHc
Confidence 3477889999999999988776421 14579999885 689999999988764
No 27
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=84.73 E-value=3.1 Score=33.50 Aligned_cols=58 Identities=10% Similarity=-0.090 Sum_probs=42.8
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
..+...+.+.||-|+++++.++...........+||++++ .++++.++.+.+.+.+..
T Consensus 188 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 245 (315)
T 2ydy_A 188 DHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGN--EQMTKYEMACAIADAFNL 245 (315)
T ss_dssp ECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCS--CCBCHHHHHHHHHHHTTC
T ss_pred ccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCC--CcccHHHHHHHHHHHhCC
Confidence 4466789999999999988776543111123479999885 479999999999887543
No 28
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=83.40 E-value=1.1 Score=35.97 Aligned_cols=55 Identities=18% Similarity=0.310 Sum_probs=35.5
Q ss_pred eeecCCc-ccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTET-VFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~-~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
++++++. ..+.|.||-|+.+++.++... . ..+||++++ .++++.++.+.+.+.+.
T Consensus 200 ~~~~g~~~~~~~i~v~Dva~~~~~~~~~~----~-~~~~~i~~~--~~~s~~e~~~~i~~~~g 255 (310)
T 1eq2_A 200 LFEGSENFKRDFVYVGDVADVNLWFLENG----V-SGIFNLGTG--RAESFQAVADATLAYHK 255 (310)
T ss_dssp --------CBCEEEHHHHHHHHHHHHHHC----C-CEEEEESCS--CCBCHHHHHHHC-----
T ss_pred EecCCCcceEccEEHHHHHHHHHHHHhcC----C-CCeEEEeCC--CccCHHHHHHHHHHHcC
Confidence 4567777 889999999999988776432 1 569999885 57999999998877643
No 29
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=83.20 E-value=1.4 Score=36.60 Aligned_cols=56 Identities=21% Similarity=0.262 Sum_probs=44.3
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..+++++...|.|.||-|+.+++.++-. .... +||++++ .+++|.++.+.+.+.+.
T Consensus 218 ~~~~~g~~~~~~i~v~Dva~ai~~~~~~----~~~g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 218 KLFEFGEQLRDFVYIEDVIQANVKAMKA----QKSG-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp ECSGGGCCEEECEEHHHHHHHHHHHTTC----SSCE-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred EEECCCCeEEccEEHHHHHHHHHHHHhc----CCCC-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 3457778889999999999998876532 1223 9999886 47999999999998765
No 30
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=82.72 E-value=3.1 Score=33.97 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=42.4
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
+.+...|+|.||-|+.+++.++..... .....+||++++ .++++.++.+.+.+.+.
T Consensus 234 ~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~g~~~~ni~~~--~~~s~~e~~~~i~~~~g 289 (348)
T 1ek6_A 234 DGTGVRDYIHVVDLAKGHIAALRKLKE-QCGCRIYNLGTG--TGYSVLQMVQAMEKASG 289 (348)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTT-TCCEEEEEECCS--CCEEHHHHHHHHHHHHC
T ss_pred CCceEEeeEEHHHHHHHHHHHHhcccc-cCCceEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 556778999999999998877653211 112369999875 57999999999988754
No 31
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=82.70 E-value=1.4 Score=36.86 Aligned_cols=56 Identities=13% Similarity=0.081 Sum_probs=43.7
Q ss_pred eeecCCcccccchHHHHHHH-HHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 14 AFRDTETVFDMIPADMVVNA-MIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNa-mI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
++++++...+.|.||-|+++ ++.++.. . ... +||++++ .++++.++.+.+.+.+..
T Consensus 250 ~~g~g~~~~~~i~v~Dva~a~i~~~~~~-~---~~g-~~~i~~~--~~~s~~e~~~~i~~~~g~ 306 (377)
T 2q1s_A 250 LENGGVATRDFIFVEDVANGLIACAADG-T---PGG-VYNIASG--KETSIADLATKINEITGN 306 (377)
T ss_dssp CSGGGCCEECCEEHHHHHHHHHHHHHHC-C---TTE-EEECCCC--CCEEHHHHHHHHHHHHTC
T ss_pred EeCCCCeEEeeEEHHHHHHHHHHHHHhc-C---CCC-eEEecCC--CceeHHHHHHHHHHHhCC
Confidence 46777888999999999999 6655532 1 123 9999885 589999999999887653
No 32
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=82.47 E-value=0.62 Score=39.82 Aligned_cols=50 Identities=18% Similarity=0.159 Sum_probs=39.9
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHH
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFD 72 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~ 72 (200)
+++...++++||.|+.+++.++... ....+||++++ .|++|.++.+.+.+
T Consensus 292 ~~~~~~~~v~v~DvA~ai~~~~~~~----~~g~~~~l~~~--~~~s~~el~~~i~~ 341 (427)
T 4f6c_A 292 MAEMPVDFSFVDTTARQIVALAQVN----TPQIIYHVLSP--NKMPVKSLLECVKR 341 (427)
T ss_dssp HHTCEECCEEHHHHHHHHHHHTTSC----CCCSEEEESCS--CCEEHHHHHHHHHS
T ss_pred cccceEEEeeHHHHHHHHHHHHcCC----CCCCEEEecCC--CCCcHHHHHHHHHH
Confidence 3577889999999999988776421 14579999885 58999999998876
No 33
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=82.31 E-value=1.7 Score=35.69 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=42.8
Q ss_pred eeecC---CcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 14 AFRDT---ETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 14 ~~~d~---~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
+++++ ....+++.||-|+.+++.++... . ....+||++++ .++++.++.+.+.+.+..
T Consensus 212 ~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~-~--~~g~~~ni~~~--~~~s~~e~~~~i~~~~g~ 272 (364)
T 2v6g_A 212 FTGCKAAWDGYSDCSDADLIAEHHIWAAVDP-Y--AKNEAFNVSNG--DVFKWKHFWKVLAEQFGV 272 (364)
T ss_dssp CCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG-G--GTTEEEEECCS--CCBCHHHHHHHHHHHHTC
T ss_pred cCCCcccccccCCCCcHHHHHHHHHHHHhCC-C--CCCceEEecCC--CcCCHHHHHHHHHHHhCC
Confidence 35555 35588999999999988776422 1 12469999885 479999999999887643
No 34
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=82.31 E-value=1.9 Score=35.54 Aligned_cols=56 Identities=20% Similarity=0.323 Sum_probs=43.8
Q ss_pred eeecCCc-ccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 14 AFRDTET-VFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 14 ~~~d~~~-~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
++++.+. ..+.|.||-|+++++.++... . ..+||++++ .++++.++.+.+.+.+..
T Consensus 247 ~~~~~~~~~~~~i~v~Dva~ai~~~~~~~----~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 303 (357)
T 2x6t_A 247 LFEGSENFKRDFVYVGDVADVNLWFLENG----V-SGIFNLGTG--RAESFQAVADATLAYHKK 303 (357)
T ss_dssp EETTGGGCEECEEEHHHHHHHHHHHHHHC----C-CEEEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred EeCCCCcceEccEEHHHHHHHHHHHHhcC----C-CCeEEecCC--CcccHHHHHHHHHHHcCC
Confidence 4566666 789999999999988776432 1 469999885 579999999999887543
No 35
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=81.71 E-value=2 Score=35.97 Aligned_cols=56 Identities=11% Similarity=0.144 Sum_probs=44.4
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
.++++.+...+.|.||-|+++++.++... ...+||++++ .++++.++.+.+.+.+.
T Consensus 236 ~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-----~~~~~ni~~~--~~~s~~e~~~~i~~~~g 291 (379)
T 2c5a_A 236 EMWGDGLQTRSFTFIDECVEGVLRLTKSD-----FREPVNIGSD--EMVSMNEMAEMVLSFEE 291 (379)
T ss_dssp EEESCSCCEECCEEHHHHHHHHHHHHHSS-----CCSCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred EEeCCCCeeEEEEEHHHHHHHHHHHhhcc-----CCCeEEeCCC--CccCHHHHHHHHHHHhC
Confidence 35678888899999999999988776421 2458999885 58999999999888654
No 36
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=81.69 E-value=1.8 Score=35.58 Aligned_cols=60 Identities=5% Similarity=-0.031 Sum_probs=46.3
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++++...+.|.+|-|+.+++.++... . ....+||++ +..+++|+.++.+.+.+...
T Consensus 183 ~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~-~--~~~~~~~i~-g~~~~~s~~e~~~~~~~~~g 242 (346)
T 3i6i_A 183 FQIYGDGNVKAYFVAGTDIGKFTMKTVDDV-R--TLNKSVHFR-PSCNCLNINELASVWEKKIG 242 (346)
T ss_dssp EEEETTSCCCEEEECHHHHHHHHHHHTTCG-G--GTTEEEECC-CGGGEECHHHHHHHHHHHHT
T ss_pred EEEccCCCceEEecCHHHHHHHHHHHHhCc-c--ccCeEEEEe-CCCCCCCHHHHHHHHHHHHC
Confidence 567889999999999999999988766432 1 124678876 33478999999999988754
No 37
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=81.46 E-value=2.5 Score=34.52 Aligned_cols=58 Identities=12% Similarity=0.176 Sum_probs=44.9
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.++++++...+.|.||-|+++++.++-.. ....+||++++ .++++.++.+.+.+.+..
T Consensus 216 ~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 273 (348)
T 1oc2_A 216 KLYGEGKNVRDWIHTNDHSTGVWAILTKG----RMGETYLIGAD--GEKNNKEVLELILEKMGQ 273 (348)
T ss_dssp EEETTSCCEEECEEHHHHHHHHHHHHHHC----CTTCEEEECCS--CEEEHHHHHHHHHHHTTC
T ss_pred eEecCCCceEeeEEHHHHHHHHHHHhhCC----CCCCeEEeCCC--CCCCHHHHHHHHHHHhCC
Confidence 34577778889999999999988776421 23469999875 589999999999887643
No 38
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=81.23 E-value=2.3 Score=34.65 Aligned_cols=58 Identities=14% Similarity=0.189 Sum_probs=44.6
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.++++.+...+.|.||-|+.+++.++-.. ....+||++++ .++++.++.+.+.+.+..
T Consensus 206 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 263 (337)
T 1r6d_A 206 PLYGDGANVREWVHTDDHCRGIALVLAGG----RAGEIYHIGGG--LELTNRELTGILLDSLGA 263 (337)
T ss_dssp EEETTSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCC--CEEEHHHHHHHHHHHHTC
T ss_pred EEeCCCCeeEeeEeHHHHHHHHHHHHhCC----CCCCEEEeCCC--CCccHHHHHHHHHHHhCC
Confidence 34577778889999999999987766421 12469999875 589999999998887543
No 39
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=80.50 E-value=1.3 Score=35.62 Aligned_cols=58 Identities=19% Similarity=0.177 Sum_probs=42.0
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYF 74 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~ 74 (200)
.+++++...|.|.||-|+.+++.++...........+||+++ .++++.++.+.+.+.+
T Consensus 203 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~---~~~s~~e~~~~i~~~~ 260 (312)
T 2yy7_A 203 CFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA---MSFTPTEIANEIKKHI 260 (312)
T ss_dssp ESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS---EEECHHHHHHHHHTTC
T ss_pred EecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC---CccCHHHHHHHHHHHC
Confidence 456778889999999999998877642211100126999974 4799999999887654
No 40
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=80.46 E-value=4.8 Score=31.79 Aligned_cols=54 Identities=19% Similarity=0.297 Sum_probs=41.8
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.++...+.|.||-|+++++.++-.. ....+||++++ .++++.++.+.+.+.+..
T Consensus 175 ~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g~ 228 (286)
T 3ius_A 175 KPGQVFSRIHVEDIAQVLAASMARP----DPGAVYNVCDD--EPVPPQDVIAYAAELQGL 228 (286)
T ss_dssp CTTCCBCEEEHHHHHHHHHHHHHSC----CTTCEEEECCS--CCBCHHHHHHHHHHHHTC
T ss_pred CCCcccceEEHHHHHHHHHHHHhCC----CCCCEEEEeCC--CCccHHHHHHHHHHHcCC
Confidence 3367789999999999988766422 13469999985 579999999999887654
No 41
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=80.05 E-value=2.7 Score=33.68 Aligned_cols=54 Identities=15% Similarity=0.050 Sum_probs=42.6
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYF 74 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~ 74 (200)
.++++++...+.|.||-|+++++.++-.. ... +||++++ .++++.++.+.+. ..
T Consensus 199 ~~~~~~~~~~~~v~v~Dva~~~~~~~~~~----~~g-~~~i~~~--~~~s~~e~~~~i~-~~ 252 (321)
T 3vps_A 199 PVEGDGEQRRDFTYITDVVDKLVALANRP----LPS-VVNFGSG--QSLSVNDVIRILQ-AT 252 (321)
T ss_dssp EEETTSCCEECEEEHHHHHHHHHHGGGSC----CCS-EEEESCS--CCEEHHHHHHHHH-TT
T ss_pred EEeCCCCceEceEEHHHHHHHHHHHHhcC----CCC-eEEecCC--CcccHHHHHHHHH-Hh
Confidence 45678889999999999999987665321 123 9999886 5799999999888 54
No 42
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=79.12 E-value=3.5 Score=34.22 Aligned_cols=55 Identities=24% Similarity=0.205 Sum_probs=43.7
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++.+...+.|.||-|+.+++.++-. . ...+||++++ .++++.++.+.+.+.+.
T Consensus 245 ~~g~~~~~~~~v~v~Dva~a~~~~~~~----~-~~~~~~i~~~--~~~s~~e~~~~i~~~~g 299 (381)
T 1n7h_A 245 FLGNLQASRDWGFAGDYVEAMWLMLQQ----E-KPDDYVVATE--EGHTVEEFLDVSFGYLG 299 (381)
T ss_dssp EESCTTCEEECEEHHHHHHHHHHHHTS----S-SCCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred EeCCCCceeeeEEHHHHHHHHHHHHhC----C-CCCeEEeeCC--CCCcHHHHHHHHHHHcC
Confidence 457778888999999999998876532 1 2369999885 58999999999988754
No 43
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=79.05 E-value=2.7 Score=34.12 Aligned_cols=57 Identities=16% Similarity=0.250 Sum_probs=41.7
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
++++.+...+.|.||-|+++++.++.. . ....+||++++ .++++.++.+.+.+.+..
T Consensus 207 ~~~~~~~~~~~i~v~Dva~~~~~~~~~-~---~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 263 (336)
T 2hun_A 207 IYGTGKNVRDWLYVEDHVRAIELVLLK-G---ESREIYNISAG--EEKTNLEVVKIILRLMGK 263 (336)
T ss_dssp EETC---CEEEEEHHHHHHHHHHHHHH-C---CTTCEEEECCS--CEECHHHHHHHHHHHTTC
T ss_pred EeCCCCceeeeEEHHHHHHHHHHHHhC-C---CCCCEEEeCCC--CcccHHHHHHHHHHHhCC
Confidence 456777788999999999998876642 1 23469999875 589999999998887543
No 44
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=78.61 E-value=3.5 Score=37.63 Aligned_cols=58 Identities=16% Similarity=0.111 Sum_probs=43.5
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhh--c-CCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHAR--Q-SSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~--~-~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
+.+...|.|.||-|+.+++.++..... . .....+||++++ .++++.++.+.+.+....
T Consensus 241 ~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g~ 301 (699)
T 1z45_A 241 DGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSG--KGSTVFEVYHAFCKASGI 301 (699)
T ss_dssp CSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred CCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCC--CCCcHHHHHHHHHHHhCC
Confidence 567788999999999999877753211 1 122469999986 479999999998887543
No 45
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=77.81 E-value=3.9 Score=33.21 Aligned_cols=56 Identities=23% Similarity=0.233 Sum_probs=41.2
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
+.+...|+|.||-|+++++.++..... .....+||++++ .++++.++.+.+.+...
T Consensus 226 ~g~~~~~~i~v~Dva~a~~~~l~~~~~-~~~~~~yni~~~--~~~s~~e~~~~i~~~~g 281 (338)
T 1udb_A 226 DGTGVRDYIHVMDLADGHVVAMEKLAN-KPGVHIYNLGAG--VGNSVLDVVNAFSKACG 281 (338)
T ss_dssp SSSCEECEEEHHHHHHHHHHHHHHHTT-CCEEEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred CCceeeeeEEHHHHHHHHHHHHhhhhc-cCCCcEEEecCC--CceeHHHHHHHHHHHhC
Confidence 345677999999999998877643211 112369999875 58999999999887654
No 46
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=77.53 E-value=4.3 Score=32.63 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=44.5
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
...++.+...+.|.||-|+++++.++... ....+||++++ .++++.++.+.+.+.+.
T Consensus 212 ~~~~~~~~~~~~v~v~Dva~a~~~~~~~~----~~g~~~~i~~~--~~~s~~e~~~~i~~~~g 268 (321)
T 2pk3_A 212 IKVGNLEAVRDFTDVRDIVQAYWLLSQYG----KTGDVYNVCSG--IGTRIQDVLDLLLAMAN 268 (321)
T ss_dssp EEESCSSCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEESCS--CEEEHHHHHHHHHHHSS
T ss_pred EEeCCCCcEEeeEEHHHHHHHHHHHHhCC----CCCCeEEeCCC--CCeeHHHHHHHHHHHhC
Confidence 45667778889999999999988776532 12369999875 58999999999887653
No 47
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=77.14 E-value=3.5 Score=33.80 Aligned_cols=57 Identities=12% Similarity=0.191 Sum_probs=44.3
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
++++.+...+.|.||-|+++++.++... ....+||++++ .++++.++.+.+.+....
T Consensus 223 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 279 (361)
T 1kew_A 223 IYGKGDQIRDWLYVEDHARALHMVVTEG----KAGETYNIGGH--NEKKNLDVVFTICDLLDE 279 (361)
T ss_dssp EETTSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCC--CEEEHHHHHHHHHHHHHH
T ss_pred EcCCCceeEeeEEHHHHHHHHHHHHhCC----CCCCEEEecCC--CeeeHHHHHHHHHHHhCC
Confidence 4567778889999999999988776421 22469999875 489999999998887544
No 48
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=76.37 E-value=3.7 Score=37.32 Aligned_cols=62 Identities=10% Similarity=0.059 Sum_probs=45.9
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.++++++...++|.||-|+++++.++..... .....+||++++ .+++++.++.+.+.+.+..
T Consensus 526 ~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~~~g~~~ni~~~-~~~~s~~el~~~i~~~~g~ 587 (660)
T 1z7e_A 526 KLIDGGKQKRCFTDIRDGIEALYRIIENAGN-RCDGEIINIGNP-ENEASIEELGEMLLASFEK 587 (660)
T ss_dssp EEEGGGCCEEECEEHHHHHHHHHHHHHCGGG-TTTTEEEEECCG-GGEEEHHHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEEEEHHHHHHHHHHHHhCccc-cCCCeEEEECCC-CCCcCHHHHHHHHHHHhcC
Confidence 3456778888999999999998877653211 113479999864 3589999999998887654
No 49
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=75.32 E-value=5.7 Score=31.52 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=41.7
Q ss_pred CcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 19 ETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 19 ~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
+...+.|.||-|+++++.++...........+||++++ .++++.++.+.+.+....
T Consensus 181 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 236 (299)
T 1n2s_A 181 DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAG--GTTTWHDYAALVFDEARK 236 (299)
T ss_dssp SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCB--SCEEHHHHHHHHHHHHHH
T ss_pred CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCC--CCCCHHHHHHHHHHHhCC
Confidence 46789999999999988776543111102469999885 489999999999887654
No 50
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=75.00 E-value=4.8 Score=31.75 Aligned_cols=56 Identities=11% Similarity=0.107 Sum_probs=42.4
Q ss_pred eecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 15 FRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 15 ~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..+++...+.|.||-|+.+++.++... .....+||++++ .++|+.++.+.+.+...
T Consensus 163 ~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~~g~~~~i~~~--~~~s~~e~~~~i~~~~g 218 (287)
T 2jl1_A 163 TNAGSGIVNSVTRNELALAAATVLTEE---GHENKTYNLVSN--QPWTFDELAQILSEVSG 218 (287)
T ss_dssp ESCTTCCBCCBCHHHHHHHHHHHHTSS---SCTTEEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred ccCCCCccCccCHHHHHHHHHHHhcCC---CCCCcEEEecCC--CcCCHHHHHHHHHHHHC
Confidence 445677889999999999987766421 123469999875 57999999999888754
No 51
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=74.93 E-value=1.8 Score=38.16 Aligned_cols=56 Identities=18% Similarity=0.188 Sum_probs=42.1
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++...+.|.||-|+++++.++... ....+||++++ +++++.++.+.+.+...
T Consensus 329 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~g~~ni~~~--~~~s~~el~~~i~~~~g 384 (516)
T 3oh8_A 329 KFGDGTSWFSWIAIDDLTDIYYRAIVDA----QISGPINAVAP--NPVSNADMTKILATSMH 384 (516)
T ss_dssp CCTTSCCEECEEEHHHHHHHHHHHHHCT----TCCEEEEESCS--CCEEHHHHHHHTTC---
T ss_pred ccCCCCceEceEeHHHHHHHHHHHHhCc----ccCCcEEEECC--CCCCHHHHHHHHHHHhC
Confidence 4677888899999999999988776422 12358999886 68999999998776543
No 52
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=74.61 E-value=2.9 Score=34.07 Aligned_cols=59 Identities=5% Similarity=-0.151 Sum_probs=41.0
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
++++.+...+++.||-|+.+++.++...........+||++ + .++++.++.+.+.+.+.
T Consensus 225 ~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g--~~~s~~e~~~~i~~~~g 283 (342)
T 2hrz_A 225 LPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-G--LSATVGEQIEALRKVAG 283 (342)
T ss_dssp ECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-C--EEEEHHHHHHHHHHHHC
T ss_pred ccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-C--CCCCHHHHHHHHHHHcC
Confidence 44555667788999999999887664221100124699994 4 47999999999888754
No 53
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=74.58 E-value=2.6 Score=33.88 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=41.1
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYF 74 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~ 74 (200)
.+++++...|.|.||-|+.+++.++...........+||+++ .++++.++.+.+.+..
T Consensus 197 ~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~---~~~s~~e~~~~i~~~~ 254 (317)
T 3ajr_A 197 CYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA---YTFTPSELYSKIKERI 254 (317)
T ss_dssp ECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS---EEECHHHHHHHHHTTC
T ss_pred eecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC---ccccHHHHHHHHHHHC
Confidence 456777888999999999998876643211111126999974 3799999998887653
No 54
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=74.32 E-value=5.8 Score=32.02 Aligned_cols=55 Identities=15% Similarity=0.065 Sum_probs=42.9
Q ss_pred eeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++.+...|.+.||-|+.+++.++-. . ...+||++++ .++++.++.+.+.+...
T Consensus 211 ~~~~~~~~~~~~~v~Dva~a~~~~~~~----~-~~~~~~i~~~--~~~s~~e~~~~i~~~~g 265 (345)
T 2z1m_A 211 VLGNLNAKRDWGYAPEYVEAMWLMMQQ----P-EPDDYVIATG--ETHTVREFVEKAAKIAG 265 (345)
T ss_dssp EESCTTCEECCEEHHHHHHHHHHHHTS----S-SCCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred eeCCCCceeeeEEHHHHHHHHHHHHhC----C-CCceEEEeCC--CCccHHHHHHHHHHHhC
Confidence 456777788999999999998776532 1 2368999875 57999999999988754
No 55
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=71.77 E-value=8.5 Score=30.40 Aligned_cols=50 Identities=4% Similarity=0.004 Sum_probs=40.1
Q ss_pred CcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 19 ETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 19 ~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
+...+.|.||-|+++++.++... ...+||++++ .++++.++.+.+.+.+.
T Consensus 189 ~~~~~~i~v~Dva~~~~~~~~~~-----~~~~~~i~~~--~~~s~~e~~~~i~~~~g 238 (292)
T 1vl0_A 189 DQVGTPTSTVDLARVVLKVIDEK-----NYGTFHCTCK--GICSWYDFAVEIFRLTG 238 (292)
T ss_dssp SCEECCEEHHHHHHHHHHHHHHT-----CCEEEECCCB--SCEEHHHHHHHHHHHHC
T ss_pred CeeeCCccHHHHHHHHHHHHhcC-----CCcEEEecCC--CCccHHHHHHHHHHHhC
Confidence 46778999999999988776532 3469999876 58999999999988754
No 56
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=71.30 E-value=6.2 Score=31.13 Aligned_cols=51 Identities=8% Similarity=0.090 Sum_probs=40.3
Q ss_pred CcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 19 ETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 19 ~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
+...+.|.||-|+++++.++... . ..+||++++ .++++.++.+.+.+.+..
T Consensus 183 ~~~~~~i~v~Dva~~~~~~~~~~----~-~~~~~i~~~--~~~s~~e~~~~i~~~~g~ 233 (287)
T 3sc6_A 183 DQIGSPTYVADLNVMINKLIHTS----L-YGTYHVSNT--GSCSWFEFAKKIFSYANM 233 (287)
T ss_dssp SCEECCEEHHHHHHHHHHHHTSC----C-CEEEECCCB--SCEEHHHHHHHHHHHHTC
T ss_pred CcccCceEHHHHHHHHHHHHhCC----C-CCeEEEcCC--CcccHHHHHHHHHHHcCC
Confidence 47779999999999987765421 1 469999986 489999999999887643
No 57
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=68.93 E-value=4.6 Score=32.89 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=40.5
Q ss_pred CCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 18 TETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 18 ~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.+...+.|.||-|+++++.++... . ..+||++++ .++++.++.+.+.+.+..
T Consensus 215 ~~~~~~~i~v~Dva~ai~~~~~~~----~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 266 (333)
T 2q1w_A 215 TKARRDFVFVKDLARATVRAVDGV----G-HGAYHFSSG--TDVAIKELYDAVVEAMAL 266 (333)
T ss_dssp EECEECEEEHHHHHHHHHHHHTTC----C-CEEEECSCS--CCEEHHHHHHHHHHHTTC
T ss_pred CCceEeeEEHHHHHHHHHHHHhcC----C-CCEEEeCCC--CCccHHHHHHHHHHHhCC
Confidence 456778999999999988765421 1 579999875 579999999999887543
No 58
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=68.07 E-value=11 Score=29.42 Aligned_cols=56 Identities=5% Similarity=-0.085 Sum_probs=42.6
Q ss_pred eecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 15 FRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 15 ~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
.++++...+.|.+|-|+++++.++... . ....+||++++ .++|+.++.+.+.+...
T Consensus 159 ~~~~~~~~~~i~~~Dva~~~~~~~~~~-~--~~g~~~~i~~~--~~~s~~e~~~~i~~~~g 214 (286)
T 2zcu_A 159 GAAGDGKIASATRADYAAAAARVISEA-G--HEGKVYELAGD--SAWTLTQLAAELTKQSG 214 (286)
T ss_dssp ESCTTCCBCCBCHHHHHHHHHHHHHSS-S--CTTCEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred ccCCCCccccccHHHHHHHHHHHhcCC-C--CCCceEEEeCC--CcCCHHHHHHHHHHHHC
Confidence 455677889999999999987766421 1 23469999874 47999999999888754
No 59
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=67.47 E-value=11 Score=30.13 Aligned_cols=52 Identities=25% Similarity=0.197 Sum_probs=41.8
Q ss_pred ecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 16 RDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 16 ~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
++.+...|.|-||-|+++++.++... ..+||++++ .++++.++.+.+.+...
T Consensus 209 ~~g~~~~~~i~v~Dva~a~~~~~~~~------~~~~~i~~~--~~~s~~e~~~~i~~~~g 260 (311)
T 2p5y_A 209 GDEGCVRDYVYVGDVAEAHALALFSL------EGIYNVGTG--EGHTTREVLMAVAEAAG 260 (311)
T ss_dssp TSCCCEECEEEHHHHHHHHHHHHHHC------CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred CCCCeEEeeEEHHHHHHHHHHHHhCC------CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 67777789999999999987766421 469999875 48999999999988754
No 60
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=62.12 E-value=6.8 Score=31.83 Aligned_cols=55 Identities=16% Similarity=0.277 Sum_probs=42.0
Q ss_pred eeecCCcccccchHHHHHH-HHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhhc
Q 040322 14 AFRDTETVFDMIPADMVVN-AMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 14 ~~~d~~~~~DiVPVD~VvN-amI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~~ 76 (200)
.+++.+ ..+.+.||-|++ +++.++.. .. ..+||++++ .++++.++.+.+.+.+..
T Consensus 209 ~~~~~~-~~~~i~~~Dva~~a~~~~~~~----~~-g~~~~v~~~--~~~s~~e~~~~i~~~~g~ 264 (330)
T 2pzm_A 209 CFCSDT-VRDFLDMSDFLAIADLSLQEG----RP-TGVFNVSTG--EGHSIKEVFDVVLDYVGA 264 (330)
T ss_dssp CCEESC-EECEEEHHHHHHHHHHHTSTT----CC-CEEEEESCS--CCEEHHHHHHHHHHHHTC
T ss_pred EeCCCC-EecceeHHHHHHHHHHHHhhc----CC-CCEEEeCCC--CCCCHHHHHHHHHHHhCC
Confidence 445666 789999999999 88766532 12 579999875 579999999999887544
No 61
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=61.48 E-value=7.6 Score=31.39 Aligned_cols=51 Identities=10% Similarity=0.087 Sum_probs=39.4
Q ss_pred CCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 18 TETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 18 ~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
++...+.|.||-|+++++.++... . ...+||++++. +++.++.+.+.+.+.
T Consensus 210 ~~~~~~~i~v~Dva~~~~~~~~~~-~---~g~~~~v~~~~---~s~~e~~~~i~~~~g 260 (342)
T 2x4g_A 210 VAGQRNVIDAAEAGRGLLMALERG-R---IGERYLLTGHN---LEMADLTRRIAELLG 260 (342)
T ss_dssp ECCEEEEEEHHHHHHHHHHHHHHS-C---TTCEEEECCEE---EEHHHHHHHHHHHHT
T ss_pred cCCCcceeeHHHHHHHHHHHHhCC-C---CCceEEEcCCc---ccHHHHHHHHHHHhC
Confidence 456778999999999988776432 1 14699998863 999999999988754
No 62
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=60.52 E-value=16 Score=28.30 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=37.5
Q ss_pred ccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 21 VFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 21 ~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..+.+.+|-|+++++.++... . ..+||+++ .++++.++.+.+.+.+.
T Consensus 180 ~~~~~~~~dva~~i~~~~~~~----~-~g~~~i~~---~~~s~~e~~~~~~~~~g 226 (273)
T 2ggs_A 180 YYSPISARKLASAILELLELR----K-TGIIHVAG---ERISRFELALKIKEKFN 226 (273)
T ss_dssp EECCCBHHHHHHHHHHHHHHT----C-CEEEECCC---CCEEHHHHHHHHHHHTT
T ss_pred CCCceEHHHHHHHHHHHHhcC----c-CCeEEECC---CcccHHHHHHHHHHHhC
Confidence 678999999999988776532 1 34899876 68999999999988754
No 63
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=59.03 E-value=5.6 Score=30.45 Aligned_cols=49 Identities=12% Similarity=0.124 Sum_probs=36.7
Q ss_pred cccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCC-CcccHHHHHHHHHHH
Q 040322 22 FDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLR-NPVTFMNVLDYSFDY 73 (200)
Q Consensus 22 ~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~-NP~t~~~~~~~~~~~ 73 (200)
.+.+.+|-|+.+++.++... . ....+||++++.. .++++.++.+.+.+.
T Consensus 200 ~~~~~~~Dva~~~~~~~~~~-~--~~g~~~~i~~~~~~~~~s~~e~~~~~~~~ 249 (253)
T 1xq6_A 200 TKTVPRADVAEVCIQALLFE-E--AKNKAFDLGSKPEGTSTPTKDFKALFSQV 249 (253)
T ss_dssp CCEEEHHHHHHHHHHHTTCG-G--GTTEEEEEEECCTTTSCCCCCHHHHHHTC
T ss_pred CcEEcHHHHHHHHHHHHcCc-c--ccCCEEEecCCCcCCCCCHHHHHHHHHHH
Confidence 35789999999987766421 1 1346999998763 689999999987764
No 64
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=54.41 E-value=19 Score=28.31 Aligned_cols=57 Identities=5% Similarity=0.077 Sum_probs=43.1
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
....+++...+.|.+|-|+.+++.++..... ...+||++ + .++|+.++.+.+.+...
T Consensus 160 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~---~g~~~~~~-~--~~~s~~e~~~~~~~~~g 216 (289)
T 3e48_A 160 LIYPAGDGRINYITRNDIARGVIAIIKNPDT---WGKRYLLS-G--YSYDMKELAAILSEASG 216 (289)
T ss_dssp ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG---TTCEEEEC-C--EEEEHHHHHHHHHHHHT
T ss_pred EecCCCCceeeeEEHHHHHHHHHHHHcCCCc---CCceEEeC-C--CcCCHHHHHHHHHHHHC
Confidence 3445667888999999999998776653221 14699998 4 58999999999988754
No 65
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=54.14 E-value=15 Score=30.42 Aligned_cols=58 Identities=10% Similarity=-0.037 Sum_probs=42.6
Q ss_pred eeecCCcccccchH-HHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 14 AFRDTETVFDMIPA-DMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 14 ~~~d~~~~~DiVPV-D~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
++++++...+.|.| |-|+++++.++...... ....+||+++ .++|+.++.+.+.+...
T Consensus 179 ~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~-~~g~~~~l~~---~~~s~~e~~~~i~~~~G 237 (352)
T 1xgk_A 179 APFDPDIPLPWLDAEHDVGPALLQIFKDGPQK-WNGHRIALTF---ETLSPVQVCAAFSRALN 237 (352)
T ss_dssp ESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH-HTTCEEEECS---EEECHHHHHHHHHHHHT
T ss_pred eccCCCCceeeEecHHHHHHHHHHHHhCCchh-hCCeEEEEec---CCCCHHHHHHHHHHHHC
Confidence 36667888899999 89999988776532111 1246999984 36999999999888754
No 66
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=50.26 E-value=34 Score=28.78 Aligned_cols=56 Identities=5% Similarity=0.014 Sum_probs=42.7
Q ss_pred cCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCC-CcccHHHHHHHHHHHhhc
Q 040322 17 DTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLR-NPVTFMNVLDYSFDYFTK 76 (200)
Q Consensus 17 d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~-NP~t~~~~~~~~~~~~~~ 76 (200)
.++..-+.+.+|-++.+++.++... ....+|++..+.. +++|+.++.+.+.+....
T Consensus 227 ~gd~~r~~v~v~D~a~~~~~a~~~~----~~g~i~~l~~g~~~~~~s~~ela~~l~~~~G~ 283 (399)
T 3nzo_A 227 PNDIKRYFVTPQESGELCLMSCIFG----ENRDIFFPKLSEALHLISFADIAVKYLKQLGY 283 (399)
T ss_dssp ESSCEECEECHHHHHHHHHHHHHHC----CTTEEEEECCCTTCCCEEHHHHHHHHHHHTTC
T ss_pred CCCCeeccCCHHHHHHHHHHHhccC----CCCCEEEecCCCCCCcccHHHHHHHHHHHhCC
Confidence 4557778999999999988777531 2246898777655 669999999999887654
No 67
>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y
Probab=48.24 E-value=5.8 Score=24.28 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=22.5
Q ss_pred eChhHHHHHHHcCcCcccccceeccccccccccC
Q 040322 166 DDRNTEKLRMATRENMMETDIFSFILSALIGKIT 199 (200)
Q Consensus 166 ~~~N~~~L~~~m~~~~~dr~~F~fD~~~i~~~~~ 199 (200)
+|+.++-|+.+|.| ..|++.|+-++.
T Consensus 37 en~rlr~l~kqmcp--------sldvdsiip~t~ 62 (63)
T 2c9l_Y 37 ENDRLRLLLKQMCP--------SLDVDSIIPRTP 62 (63)
T ss_dssp HHHHHHHHHHHHCT--------TCCHHHHSCCCC
T ss_pred cchHHHHHHHHhCC--------cccccccCCCCC
Confidence 58899999999999 789999887764
No 68
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=45.74 E-value=28 Score=27.79 Aligned_cols=60 Identities=12% Similarity=0.029 Sum_probs=43.3
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++++...+.|.+|-|+.+++.++... . ....+|+++.+ ..++|+.++.+.+.+...
T Consensus 177 ~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-~--~~g~~~~~~g~-~~~~t~~e~~~~~~~~~g 236 (321)
T 3c1o_A 177 IVIYGTGETKFVLNYEEDIAKYTIKVACDP-R--CCNRIVIYRPP-KNIISQNELISLWEAKSG 236 (321)
T ss_dssp EEEETTSCCEEEEECHHHHHHHHHHHHHCG-G--GTTEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred eEEecCCCcceeEeeHHHHHHHHHHHHhCc-c--ccCeEEEEeCC-CCcccHHHHHHHHHHHcC
Confidence 345677888899999999999987766432 1 12356666532 357999999999988754
No 69
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=43.10 E-value=20 Score=28.47 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=42.1
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
.++++++...+.|.+|-|+.+++.++... . ....+|+++.+ .+++|+.++.+.+.+...
T Consensus 183 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~~-~--~~~~~~~~~g~-~~~~s~~e~~~~~~~~~g 241 (313)
T 1qyd_A 183 LIYGDGNVKGIWVDEDDVGTYTIKSIDDP-Q--TLNKTMYIRPP-MNILSQKEVIQIWERLSE 241 (313)
T ss_dssp CCBTTSCSEEEEECHHHHHHHHHHHTTCG-G--GSSSEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred EEeCCCCceEEEEEHHHHHHHHHHHHhCc-c--cCCceEEEeCC-CCccCHHHHHHHHHHhcC
Confidence 45677888899999999999987666422 1 11345665432 367999999999988754
No 70
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=41.08 E-value=18 Score=28.66 Aligned_cols=60 Identities=8% Similarity=0.035 Sum_probs=42.6
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++++...+.|.+|-|+++++.++... . ....+|+++.+ .+++|+.++.+.+.+...
T Consensus 177 ~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-~--~~~~~~~~~g~-~~~~s~~e~~~~~~~~~g 236 (308)
T 1qyc_A 177 VVILGDGNARVVFVKEEDIGTFTIKAVDDP-R--TLNKTLYLRLP-ANTLSLNELVALWEKKID 236 (308)
T ss_dssp EEEETTSCCEEEEECHHHHHHHHHTTSSCG-G--GTTEEEECCCG-GGEEEHHHHHHHHHHHTT
T ss_pred eEEecCCCceEEEecHHHHHHHHHHHHhCc-c--ccCeEEEEeCC-CCccCHHHHHHHHHHHhC
Confidence 456778888999999999999877655321 1 12356666432 368999999999887643
No 71
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=38.67 E-value=33 Score=27.03 Aligned_cols=60 Identities=12% Similarity=-0.036 Sum_probs=42.1
Q ss_pred eeeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 12 YYAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 12 ~~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
..++++++...+.|.+|-|+.+++.++... . ....+|+++.+ .+++|+.++.+.+.+...
T Consensus 176 ~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-~--~~~~~~~~~~~-~~~~s~~e~~~~~~~~~g 235 (307)
T 2gas_A 176 VVILGDGNVKGAYVTEADVGTFTIRAANDP-N--TLNKAVHIRLP-KNYLTQNEVIALWEKKIG 235 (307)
T ss_dssp EEEETTSCSEEEEECHHHHHHHHHHHHTCG-G--GTTEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred EEEecCCCcceEEeeHHHHHHHHHHHHcCc-c--ccCceEEEeCC-CCcCCHHHHHHHHHHHhC
Confidence 345677788899999999999987666422 1 12345655432 368999999999888653
No 72
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.35 E-value=49 Score=25.00 Aligned_cols=49 Identities=8% Similarity=0.053 Sum_probs=35.5
Q ss_pred ecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHH
Q 040322 16 RDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYS 70 (200)
Q Consensus 16 ~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~ 70 (200)
.+.+...+.|.+|-|+++++.++-... ....+||++++ +.++.++.+.+
T Consensus 186 ~~~~~~~~~i~~~Dva~~~~~~~~~~~---~~g~~~~v~~~---~~~~~e~~~~i 234 (236)
T 3e8x_A 186 PHFSEITRSITRHDVAKVIAELVDQQH---TIGKTFEVLNG---DTPIAKVVEQL 234 (236)
T ss_dssp SSCSCCCCCEEHHHHHHHHHHHTTCGG---GTTEEEEEEEC---SEEHHHHHHTC
T ss_pred cCCCcccCcEeHHHHHHHHHHHhcCcc---ccCCeEEEeCC---CcCHHHHHHHh
Confidence 344456889999999999887764321 23579999886 48999987643
No 73
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=32.56 E-value=66 Score=25.34 Aligned_cols=45 Identities=18% Similarity=0.084 Sum_probs=32.7
Q ss_pred ccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHh
Q 040322 23 DMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYF 74 (200)
Q Consensus 23 DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~ 74 (200)
|+|.||-|+++++.++.. .. ....|| +++ .++++.++.+.+.+.+
T Consensus 223 ~~i~v~Dva~a~~~~~~~-~~---~~g~~~-~~~--~~~s~~e~~~~i~~~~ 267 (322)
T 2p4h_X 223 HMVHVDDVARAHIYLLEN-SV---PGGRYN-CSP--FIVPIEEMSQLLSAKY 267 (322)
T ss_dssp EEEEHHHHHHHHHHHHHS-CC---CCEEEE-CCC--EEEEHHHHHHHHHHHC
T ss_pred CEEEHHHHHHHHHHHhhC-cC---CCCCEE-EcC--CCCCHHHHHHHHHHhC
Confidence 799999999998876632 11 122488 443 5799999999887754
No 74
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=29.34 E-value=51 Score=26.18 Aligned_cols=59 Identities=14% Similarity=0.042 Sum_probs=41.8
Q ss_pred eeeecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHHHhh
Q 040322 13 YAFRDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFDYFT 75 (200)
Q Consensus 13 ~~~~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~~~~ 75 (200)
.++++++...+.|.+|-|+.+++.++... . ....+|+++.+ .+++|+.++.+.+.+...
T Consensus 177 ~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-~--~~~~~~~~~g~-~~~~s~~e~~~~~~~~~g 235 (318)
T 2r6j_A 177 TVYGTGEAKFAMNYEQDIGLYTIKVATDP-R--ALNRVVIYRPS-TNIITQLELISRWEKKIG 235 (318)
T ss_dssp EEETTSCCEEEEECHHHHHHHHHHHTTCG-G--GTTEEEECCCG-GGEEEHHHHHHHHHHHHT
T ss_pred EEecCCCceeeEeeHHHHHHHHHHHhcCc-c--ccCeEEEecCC-CCccCHHHHHHHHHHHhC
Confidence 45677888899999999999877665421 1 12356665432 357999999999888653
No 75
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=27.64 E-value=84 Score=23.29 Aligned_cols=44 Identities=9% Similarity=0.094 Sum_probs=32.3
Q ss_pred CcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHH
Q 040322 19 ETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLD 68 (200)
Q Consensus 19 ~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~ 68 (200)
+...+.|.+|-|+++++.++.... ....+||++++ +.++.++.+
T Consensus 166 ~~~~~~i~~~Dva~~i~~~l~~~~---~~g~~~~i~~g---~~~~~e~~~ 209 (219)
T 3dqp_A 166 DEVSASNTIGDVADTIKELVMTDH---SIGKVISMHNG---KTAIKEALE 209 (219)
T ss_dssp SSCCCCEEHHHHHHHHHHHHTCGG---GTTEEEEEEEC---SEEHHHHHH
T ss_pred CCcCCcccHHHHHHHHHHHHhCcc---ccCcEEEeCCC---CccHHHHHH
Confidence 566789999999999887765321 23579999886 477777654
No 76
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=22.21 E-value=1.1e+02 Score=24.73 Aligned_cols=50 Identities=10% Similarity=-0.013 Sum_probs=36.7
Q ss_pred ecCCcccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHHHHHHHHHH
Q 040322 16 RDTETVFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFMNVLDYSFD 72 (200)
Q Consensus 16 ~d~~~~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~~~~~~~~~ 72 (200)
.+++..-+.+.+|-++++++.++... ....+|+.++. ++++.++.+.+.+
T Consensus 210 ~~~~~~r~~i~v~D~a~~v~~~l~~~----~~g~~~~~~~~---~~s~~el~~~i~~ 259 (344)
T 2gn4_A 210 TDIRMTRFWITLDEGVSFVLKSLKRM----HGGEIFVPKIP---SMKMTDLAKALAP 259 (344)
T ss_dssp SCTTCEEEEECHHHHHHHHHHHHHHC----CSSCEEEECCC---EEEHHHHHHHHCT
T ss_pred eCCCeEEeeEEHHHHHHHHHHHHhhc----cCCCEEecCCC---cEEHHHHHHHHHH
Confidence 36667778999999999988776431 12458987543 5899999888764
No 77
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.62 E-value=1.1e+02 Score=22.72 Aligned_cols=39 Identities=13% Similarity=0.004 Sum_probs=26.2
Q ss_pred ccccchHHHHHHHHHHHHHHhhhcCCCceEEEeecCCCCcccHH
Q 040322 21 VFDMIPADMVVNAMIVAMVAHARQSSYVNIYRVGSSLRNPVTFM 64 (200)
Q Consensus 21 ~~DiVPVD~VvNamI~aa~~~~~~~~~~~VYn~~Ss~~NP~t~~ 64 (200)
..+.|.||-|+++++.++-.. .....+||++++. |.+|.
T Consensus 188 ~~~~i~~~Dva~ai~~~l~~~---~~~g~~~~~~~~~--~~~~~ 226 (227)
T 3dhn_A 188 GNSHISVEDYAAAMIDELEHP---KHHQERFTIGYLE--HHHHH 226 (227)
T ss_dssp SCCEEEHHHHHHHHHHHHHSC---CCCSEEEEEECCS--CCC--
T ss_pred CCcEEeHHHHHHHHHHHHhCc---cccCcEEEEEeeh--hcccC
Confidence 345799999999988776422 1245799999864 44554
No 78
>2rlw_A PLNF; toxin; NMR {Lactobacillus plantarum}
Probab=20.54 E-value=49 Score=17.49 Aligned_cols=11 Identities=45% Similarity=0.673 Sum_probs=8.7
Q ss_pred cchHHHHHHHH
Q 040322 24 MIPADMVVNAM 34 (200)
Q Consensus 24 iVPVD~VvNam 34 (200)
+=|+|.|+.+.
T Consensus 18 vgpadwvisav 28 (34)
T 2rlw_A 18 VGPADWVISAV 28 (34)
T ss_dssp HHHHHHHHHHH
T ss_pred cChHHHHHHHH
Confidence 45999999874
Done!