Query 040324
Match_columns 488
No_of_seqs 348 out of 3246
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 07:20:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040324.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040324hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1357 Serine palmitoyltransf 100.0 6.7E-97 1E-101 698.6 35.9 477 2-478 35-514 (519)
2 PLN02483 serine palmitoyltrans 100.0 2.8E-83 6.1E-88 659.1 54.3 478 1-478 1-478 (489)
3 COG0156 BioF 7-keto-8-aminopel 100.0 2.4E-62 5.1E-67 478.4 41.1 350 99-463 38-387 (388)
4 PLN02955 8-amino-7-oxononanoat 100.0 5E-56 1.1E-60 443.4 40.1 351 96-471 98-466 (476)
5 KOG1359 Glycine C-acetyltransf 100.0 1.1E-53 2.4E-58 383.6 30.2 351 96-468 63-414 (417)
6 KOG1360 5-aminolevulinate synt 100.0 3E-53 6.5E-58 395.1 32.5 400 50-473 128-531 (570)
7 PLN02822 serine palmitoyltrans 100.0 2E-51 4.4E-56 422.1 42.3 373 70-468 95-479 (481)
8 COG4992 ArgD Ornithine/acetylo 100.0 4.8E-52 1E-56 397.1 30.8 348 66-469 23-401 (404)
9 COG0160 GabT 4-aminobutyrate a 100.0 1.3E-48 2.7E-53 385.2 34.8 354 66-467 37-446 (447)
10 PRK13393 5-aminolevulinate syn 100.0 1.5E-47 3.2E-52 389.1 43.6 353 99-469 44-399 (406)
11 TIGR01821 5aminolev_synth 5-am 100.0 2E-47 4.3E-52 388.0 43.5 353 99-469 44-399 (402)
12 PRK09064 5-aminolevulinate syn 100.0 1.2E-46 2.5E-51 383.2 43.4 355 99-471 45-402 (407)
13 PLN03227 serine palmitoyltrans 100.0 9.4E-47 2E-51 379.5 40.4 362 103-473 1-389 (392)
14 PRK13392 5-aminolevulinate syn 100.0 6.9E-45 1.5E-49 370.2 40.9 353 99-469 45-400 (410)
15 TIGR01822 2am3keto_CoA 2-amino 100.0 2E-43 4.4E-48 358.1 45.0 373 66-469 19-392 (393)
16 PRK07179 hypothetical protein; 100.0 2.8E-43 6E-48 358.1 45.2 353 98-472 52-404 (407)
17 TIGR03246 arg_catab_astC succi 100.0 3.2E-44 7E-49 362.8 35.1 346 66-467 16-396 (397)
18 COG0161 BioA Adenosylmethionin 100.0 1.5E-44 3.3E-49 353.7 29.8 349 68-468 27-445 (449)
19 PLN02760 4-aminobutyrate:pyruv 100.0 3.3E-44 7.1E-49 368.7 33.1 356 65-471 69-496 (504)
20 PRK07505 hypothetical protein; 100.0 4.2E-43 9.2E-48 356.0 40.4 374 54-466 6-399 (402)
21 PRK11522 putrescine--2-oxoglut 100.0 1.1E-43 2.3E-48 361.7 34.8 356 66-469 62-454 (459)
22 TIGR03372 putres_am_tran putre 100.0 1.5E-43 3.3E-48 358.0 34.4 346 71-464 61-442 (442)
23 COG0001 HemL Glutamate-1-semia 100.0 3.7E-43 8E-48 339.6 31.8 348 67-468 35-430 (432)
24 TIGR01825 gly_Cac_T_rel pyrido 100.0 1.6E-41 3.4E-46 343.4 43.5 369 66-468 15-383 (385)
25 PRK04073 rocD ornithine--oxo-a 100.0 9.2E-43 2E-47 352.6 32.9 341 66-464 21-395 (396)
26 KOG1402 Ornithine aminotransfe 100.0 6.3E-44 1.4E-48 325.7 21.7 355 52-465 30-426 (427)
27 PRK12403 putative aminotransfe 100.0 2.2E-42 4.7E-47 353.4 35.8 351 67-468 36-454 (460)
28 PRK07678 aminotransferase; Val 100.0 2E-42 4.3E-47 353.1 35.3 354 68-467 30-450 (451)
29 PRK08593 4-aminobutyrate amino 100.0 3E-42 6.4E-47 351.3 36.1 354 67-470 24-433 (445)
30 PRK06062 hypothetical protein; 100.0 4.1E-42 8.9E-47 350.5 35.9 350 66-468 34-447 (451)
31 PRK12381 bifunctional succinyl 100.0 4.7E-42 1E-46 348.0 35.2 348 66-469 20-402 (406)
32 PRK08117 4-aminobutyrate amino 100.0 4.6E-42 9.9E-47 350.7 34.6 352 69-468 27-431 (433)
33 PRK06105 aminotransferase; Pro 100.0 4.3E-42 9.4E-47 351.1 34.3 354 66-468 29-451 (460)
34 PRK05958 8-amino-7-oxononanoat 100.0 5E-41 1.1E-45 339.8 41.4 361 69-463 24-384 (385)
35 TIGR00858 bioF 8-amino-7-oxono 100.0 5.5E-41 1.2E-45 336.3 41.3 360 69-461 1-360 (360)
36 PRK07482 hypothetical protein; 100.0 7.1E-42 1.5E-46 349.6 35.1 351 68-467 33-455 (461)
37 PRK03715 argD acetylornithine 100.0 3.3E-42 7.2E-47 346.3 31.9 343 66-467 17-394 (395)
38 PRK13360 omega amino acid--pyr 100.0 8.8E-42 1.9E-46 347.2 34.4 349 67-467 28-441 (442)
39 PRK06943 adenosylmethionine--8 100.0 8.3E-42 1.8E-46 348.0 33.9 348 67-467 36-447 (453)
40 PRK05965 hypothetical protein; 100.0 1.2E-41 2.6E-46 347.8 34.8 350 68-467 29-448 (459)
41 PRK06058 4-aminobutyrate amino 100.0 6.7E-42 1.5E-46 349.4 32.8 357 66-467 37-443 (443)
42 PRK07986 adenosylmethionine--8 100.0 3.3E-42 7.1E-47 348.2 29.9 345 69-466 27-423 (428)
43 KOG1404 Alanine-glyoxylate ami 100.0 2.4E-42 5.1E-47 323.0 26.3 349 66-460 31-432 (442)
44 PRK06082 4-aminobutyrate amino 100.0 1.5E-41 3.2E-46 346.8 34.5 350 66-469 53-454 (459)
45 PLN02624 ornithine-delta-amino 100.0 1.2E-41 2.6E-46 349.5 33.5 354 66-472 56-450 (474)
46 PRK06173 adenosylmethionine--8 100.0 1.5E-41 3.3E-46 343.8 32.7 345 70-467 29-426 (429)
47 PRK06938 diaminobutyrate--2-ox 100.0 3.1E-41 6.8E-46 344.4 35.2 354 66-467 44-461 (464)
48 TIGR01885 Orn_aminotrans ornit 100.0 3.4E-41 7.4E-46 341.9 34.7 346 66-464 18-400 (401)
49 PRK05964 adenosylmethionine--8 100.0 2.7E-41 5.9E-46 344.0 33.8 349 66-467 23-423 (423)
50 PRK09221 beta alanine--pyruvat 100.0 3.6E-41 7.8E-46 343.0 34.4 350 66-467 30-444 (445)
51 PRK05639 4-aminobutyrate amino 100.0 5.4E-41 1.2E-45 342.1 35.6 358 66-467 34-444 (457)
52 PRK07483 hypothetical protein; 100.0 4E-41 8.6E-46 342.5 34.4 359 65-467 10-438 (443)
53 PLN02482 glutamate-1-semialdeh 100.0 2.2E-41 4.7E-46 344.9 32.5 343 67-467 81-474 (474)
54 PRK07030 adenosylmethionine--8 100.0 5.5E-41 1.2E-45 342.9 35.1 346 69-467 31-447 (466)
55 PRK07480 putative aminotransfe 100.0 5.7E-41 1.2E-45 342.2 34.7 350 68-468 33-450 (456)
56 KOG1358 Serine palmitoyltransf 100.0 5.1E-42 1.1E-46 320.1 24.5 363 98-467 92-466 (467)
57 PRK06541 hypothetical protein; 100.0 9.5E-41 2.1E-45 340.9 36.1 354 68-468 35-457 (460)
58 PRK06917 hypothetical protein; 100.0 3.5E-41 7.7E-46 343.2 32.8 357 66-467 13-438 (447)
59 PRK09264 diaminobutyrate--2-ox 100.0 9.5E-41 2.1E-45 339.5 35.4 355 66-468 20-418 (425)
60 PRK05093 argD bifunctional N-s 100.0 9.1E-41 2E-45 338.8 35.1 347 65-467 20-401 (403)
61 PRK06939 2-amino-3-ketobutyrat 100.0 1.2E-39 2.6E-44 331.1 42.9 369 69-468 26-395 (397)
62 PRK05630 adenosylmethionine--8 100.0 5.3E-41 1.1E-45 339.5 32.7 349 66-466 21-420 (422)
63 PRK00615 glutamate-1-semialdeh 100.0 3.5E-41 7.5E-46 340.8 30.8 346 66-467 34-429 (433)
64 PRK08742 adenosylmethionine--8 100.0 1.2E-40 2.7E-45 340.0 35.1 346 69-467 48-468 (472)
65 PRK12389 glutamate-1-semialdeh 100.0 1.1E-40 2.4E-45 339.1 34.5 343 66-466 34-427 (428)
66 PRK07481 hypothetical protein; 100.0 1.8E-40 3.9E-45 338.5 36.1 355 67-468 24-447 (449)
67 PRK07036 hypothetical protein; 100.0 1.6E-40 3.4E-45 339.8 35.6 351 66-467 32-453 (466)
68 PRK06916 adenosylmethionine--8 100.0 1E-40 2.2E-45 341.0 33.7 349 67-468 38-457 (460)
69 TIGR02407 ectoine_ectB diamino 100.0 1.5E-40 3.2E-45 336.5 34.0 353 66-466 16-412 (412)
70 PRK07495 4-aminobutyrate amino 100.0 2.7E-40 5.8E-45 335.0 35.4 353 68-468 23-423 (425)
71 PRK01278 argD acetylornithine 100.0 1.6E-40 3.5E-45 335.9 33.1 343 66-466 12-388 (389)
72 PRK06931 diaminobutyrate--2-ox 100.0 5.7E-40 1.2E-44 335.1 36.1 358 66-467 39-455 (459)
73 TIGR00709 dat 2,4-diaminobutyr 100.0 7.2E-40 1.6E-44 334.1 36.5 358 66-467 20-436 (442)
74 PRK05769 4-aminobutyrate amino 100.0 7.3E-40 1.6E-44 333.3 36.0 351 66-467 35-440 (441)
75 PRK05937 8-amino-7-oxononanoat 100.0 1.8E-39 3.9E-44 325.7 38.0 347 99-472 3-356 (370)
76 PRK08360 4-aminobutyrate amino 100.0 8.1E-40 1.8E-44 332.9 35.3 353 66-468 22-428 (443)
77 PRK00854 rocD ornithine--oxo-a 100.0 7.4E-40 1.6E-44 332.5 35.0 345 65-465 21-400 (401)
78 PRK04612 argD acetylornithine 100.0 6.2E-40 1.4E-44 330.6 33.9 347 66-467 21-404 (408)
79 PRK06777 4-aminobutyrate amino 100.0 1.1E-39 2.3E-44 331.1 35.0 351 67-465 22-420 (421)
80 PLN00144 acetylornithine trans 100.0 5.6E-40 1.2E-44 329.2 32.3 341 71-467 1-381 (382)
81 PRK03244 argD acetylornithine 100.0 5.6E-40 1.2E-44 333.1 32.5 345 67-468 25-396 (398)
82 PRK08297 L-lysine aminotransfe 100.0 4E-40 8.6E-45 335.2 31.3 354 62-467 19-442 (443)
83 PRK09792 4-aminobutyrate trans 100.0 1.7E-39 3.8E-44 329.6 34.5 350 68-465 23-420 (421)
84 TIGR00699 GABAtrns_euk 4-amino 100.0 1.6E-40 3.5E-45 336.3 26.5 345 66-464 39-464 (464)
85 PRK02936 argD acetylornithine 100.0 1.5E-39 3.3E-44 327.7 33.1 341 66-464 10-377 (377)
86 PRK06149 hypothetical protein; 100.0 2.2E-39 4.8E-44 358.0 36.4 351 67-466 567-970 (972)
87 PRK04013 argD acetylornithine/ 100.0 1.7E-39 3.7E-44 321.2 31.3 331 67-467 6-361 (364)
88 TIGR00700 GABAtrnsam 4-aminobu 100.0 4.6E-39 1E-43 327.1 35.3 351 66-465 14-419 (420)
89 PRK07046 aminotransferase; Val 100.0 2.1E-39 4.5E-44 330.1 32.7 344 65-467 55-451 (453)
90 PTZ00125 ornithine aminotransf 100.0 3.3E-39 7.1E-44 327.9 34.0 349 65-468 11-397 (400)
91 PRK06148 hypothetical protein; 100.0 3.1E-39 6.8E-44 356.7 33.8 352 66-467 605-1011(1013)
92 cd06454 KBL_like KBL_like; thi 100.0 4.9E-38 1.1E-42 313.7 38.7 348 100-463 1-348 (349)
93 cd00610 OAT_like Acetyl ornith 100.0 1.2E-38 2.6E-43 325.3 33.8 347 66-464 17-413 (413)
94 TIGR00508 bioA adenosylmethion 100.0 1.5E-38 3.1E-43 322.8 32.2 345 69-466 29-426 (427)
95 PRK06918 4-aminobutyrate amino 100.0 5.6E-38 1.2E-42 321.5 35.4 352 67-467 36-444 (451)
96 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.5E-38 7.5E-43 320.7 29.8 351 62-463 12-431 (431)
97 PRK00062 glutamate-1-semialdeh 100.0 1.5E-37 3.3E-42 316.3 31.4 344 68-467 33-425 (426)
98 TIGR00713 hemL glutamate-1-sem 100.0 2.6E-37 5.6E-42 315.7 31.3 344 66-467 29-423 (423)
99 PRK04260 acetylornithine amino 100.0 8.4E-37 1.8E-41 307.2 32.3 334 67-463 11-374 (375)
100 PRK08088 4-aminobutyrate amino 100.0 6.3E-36 1.4E-40 304.8 34.3 354 66-467 22-424 (425)
101 PRK02627 acetylornithine amino 100.0 6.2E-36 1.3E-40 303.6 33.7 343 66-467 20-395 (396)
102 PRK06209 glutamate-1-semialdeh 100.0 1.2E-36 2.7E-41 309.3 28.2 342 66-467 29-406 (431)
103 KOG1401 Acetylornithine aminot 100.0 7.9E-36 1.7E-40 281.6 27.2 352 66-468 37-432 (433)
104 TIGR00707 argD acetylornithine 100.0 1.3E-34 2.9E-39 292.1 33.1 337 66-463 8-378 (379)
105 PLN02974 adenosylmethionine-8- 100.0 3E-34 6.6E-39 306.1 32.2 352 69-464 341-816 (817)
106 PF00202 Aminotran_3: Aminotra 100.0 4.7E-34 1E-38 281.6 21.7 274 71-388 2-316 (339)
107 TIGR03576 pyridox_MJ0158 pyrid 100.0 9.4E-32 2E-36 265.5 32.1 305 108-464 27-345 (346)
108 KOG1403 Predicted alanine-glyo 100.0 1.3E-32 2.7E-37 248.6 18.5 358 68-473 30-444 (452)
109 PRK13034 serine hydroxymethylt 100.0 5.3E-31 1.1E-35 267.1 32.1 334 100-467 28-393 (416)
110 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 3.9E-30 8.4E-35 258.1 34.8 321 117-466 17-368 (370)
111 COG0436 Aspartate/tyrosine/aro 100.0 1.7E-29 3.6E-34 252.9 33.5 334 100-467 28-392 (393)
112 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 5.5E-28 1.2E-32 243.9 35.8 302 141-470 58-385 (387)
113 PF00155 Aminotran_1_2: Aminot 100.0 5.7E-29 1.2E-33 249.7 25.2 338 101-460 2-363 (363)
114 PRK06108 aspartate aminotransf 100.0 9.3E-27 2E-31 235.3 34.8 333 100-465 24-381 (382)
115 PRK07681 aspartate aminotransf 100.0 8.9E-27 1.9E-31 236.4 34.7 331 99-463 31-385 (399)
116 PRK07682 hypothetical protein; 100.0 1.3E-26 2.9E-31 233.6 33.7 333 101-467 21-377 (378)
117 PRK13580 serine hydroxymethylt 100.0 1.2E-26 2.6E-31 232.6 32.7 339 100-467 49-446 (493)
118 PLN03226 serine hydroxymethylt 100.0 1.5E-26 3.3E-31 236.4 34.0 338 100-467 34-420 (475)
119 PRK02731 histidinol-phosphate 100.0 1.8E-26 3.9E-31 231.8 33.5 323 99-465 31-365 (367)
120 PLN00175 aminotransferase fami 100.0 3.9E-26 8.5E-31 232.0 36.3 333 100-465 54-412 (413)
121 PRK06207 aspartate aminotransf 100.0 1.1E-25 2.3E-30 228.6 37.2 335 99-467 38-403 (405)
122 PLN02721 threonine aldolase 100.0 1.8E-26 3.9E-31 230.6 30.9 330 100-466 5-352 (353)
123 PRK09082 methionine aminotrans 100.0 3.2E-26 6.9E-31 231.3 32.7 334 100-462 30-385 (386)
124 PRK07324 transaminase; Validat 100.0 5.2E-26 1.1E-30 228.4 33.7 329 99-467 25-371 (373)
125 cd06502 TA_like Low-specificit 100.0 4.4E-27 9.5E-32 233.6 25.4 323 104-462 1-337 (338)
126 PRK08068 transaminase; Reviewe 100.0 5.9E-26 1.3E-30 229.7 33.7 331 99-462 31-385 (389)
127 cd06451 AGAT_like Alanine-glyo 100.0 1.7E-25 3.6E-30 223.9 36.0 315 118-464 8-355 (356)
128 PRK03317 histidinol-phosphate 100.0 1.2E-25 2.5E-30 225.9 33.7 321 101-466 27-364 (368)
129 PRK07366 succinyldiaminopimela 100.0 9.9E-26 2.1E-30 228.0 33.1 332 99-463 29-387 (388)
130 PRK08912 hypothetical protein; 100.0 2.1E-25 4.5E-30 225.6 35.4 333 100-465 26-385 (387)
131 PRK09276 LL-diaminopimelate am 100.0 1.3E-25 2.8E-30 227.0 33.8 331 99-462 30-384 (385)
132 PRK08153 histidinol-phosphate 100.0 2.6E-25 5.5E-30 223.1 35.6 326 100-467 32-366 (369)
133 PRK05764 aspartate aminotransf 100.0 1.7E-25 3.8E-30 226.8 34.6 333 99-467 30-392 (393)
134 COG1168 MalY Bifunctional PLP- 100.0 1.5E-25 3.3E-30 211.3 31.4 318 117-467 40-387 (388)
135 PRK05942 aspartate aminotransf 100.0 1.9E-25 4.2E-30 226.2 34.6 331 99-462 34-388 (394)
136 TIGR03540 DapC_direct LL-diami 100.0 2.8E-25 6.1E-30 224.3 35.4 331 99-462 28-382 (383)
137 PRK08175 aminotransferase; Val 100.0 2E-25 4.4E-30 226.2 33.7 340 99-468 28-391 (395)
138 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 2.9E-25 6.2E-30 222.5 34.4 320 117-464 10-360 (361)
139 PRK06290 aspartate aminotransf 100.0 5E-25 1.1E-29 223.4 36.4 334 99-469 43-408 (410)
140 TIGR03392 FeS_syn_CsdA cystein 100.0 3.6E-25 7.7E-30 224.8 34.9 337 99-467 16-396 (398)
141 PRK12414 putative aminotransfe 100.0 3.5E-25 7.6E-30 223.4 34.5 333 100-462 29-383 (384)
142 PRK08361 aspartate aminotransf 100.0 2.1E-25 4.5E-30 225.8 32.7 334 100-466 33-390 (391)
143 PRK00950 histidinol-phosphate 100.0 2.1E-25 4.5E-30 223.6 32.4 316 99-464 33-360 (361)
144 TIGR01141 hisC histidinol-phos 100.0 2.1E-25 4.6E-30 222.2 32.1 316 99-461 18-346 (346)
145 PRK07309 aromatic amino acid a 100.0 6E-25 1.3E-29 222.3 35.4 336 100-467 30-389 (391)
146 TIGR01976 am_tr_V_VC1184 cyste 100.0 3.1E-25 6.8E-30 225.3 33.3 333 100-460 18-397 (397)
147 PRK07683 aminotransferase A; V 100.0 4.9E-25 1.1E-29 222.6 34.4 333 100-466 28-383 (387)
148 COG0079 HisC Histidinol-phosph 100.0 7.1E-25 1.5E-29 215.7 34.6 319 101-466 23-354 (356)
149 PRK08960 hypothetical protein; 99.9 5.1E-25 1.1E-29 222.7 34.2 332 99-465 31-386 (387)
150 PRK05957 aspartate aminotransf 99.9 7E-25 1.5E-29 221.7 35.1 325 117-467 42-386 (389)
151 PRK08636 aspartate aminotransf 99.9 1.3E-24 2.8E-29 220.8 37.0 342 99-467 32-401 (403)
152 PRK10874 cysteine sulfinate de 99.9 5E-25 1.1E-29 224.0 33.9 337 99-467 19-399 (401)
153 TIGR03537 DapC succinyldiamino 99.9 3.8E-25 8.3E-30 220.5 32.5 323 102-462 2-349 (350)
154 cd00378 SHMT Serine-glycine hy 99.9 3E-25 6.5E-30 225.7 31.9 336 100-466 19-385 (402)
155 COG1167 ARO8 Transcriptional r 99.9 5.8E-25 1.3E-29 225.0 34.0 347 100-468 89-457 (459)
156 PRK03158 histidinol-phosphate 99.9 4.6E-25 1E-29 220.9 32.3 319 100-463 29-358 (359)
157 PRK07777 aminotransferase; Val 99.9 1.4E-24 3E-29 219.6 35.7 332 100-464 24-384 (387)
158 PRK02948 cysteine desulfurase; 99.9 1.4E-25 3E-30 226.5 28.3 326 113-467 9-375 (381)
159 TIGR01979 sufS cysteine desulf 99.9 6.6E-25 1.4E-29 223.3 32.8 338 99-468 18-403 (403)
160 PRK01533 histidinol-phosphate 99.9 5.5E-25 1.2E-29 220.0 30.9 318 99-468 28-357 (366)
161 PRK09148 aminotransferase; Val 99.9 1.2E-24 2.5E-29 221.1 33.4 341 99-469 29-393 (405)
162 PRK06348 aspartate aminotransf 99.9 1.3E-24 2.9E-29 219.3 33.3 291 148-463 68-382 (384)
163 PRK06225 aspartate aminotransf 99.9 1.8E-24 3.9E-29 218.2 34.1 333 99-468 27-378 (380)
164 PRK15481 transcriptional regul 99.9 1.1E-24 2.4E-29 223.3 32.8 295 144-465 119-430 (431)
165 PRK13520 L-tyrosine decarboxyl 99.9 1.9E-24 4.1E-29 217.5 33.2 320 114-465 30-370 (371)
166 PRK10534 L-threonine aldolase; 99.9 2E-25 4.3E-30 221.2 25.6 319 103-465 2-332 (333)
167 PRK00011 glyA serine hydroxyme 99.9 1.8E-24 4E-29 220.8 33.4 335 100-466 25-389 (416)
168 PRK05387 histidinol-phosphate 99.9 3E-24 6.6E-29 214.5 34.1 319 99-465 23-352 (353)
169 PTZ00377 alanine aminotransfer 99.9 5E-24 1.1E-28 220.8 36.9 335 119-471 92-480 (481)
170 cd00613 GDC-P Glycine cleavage 99.9 4.3E-25 9.3E-30 224.3 28.0 314 113-460 30-398 (398)
171 PLN00145 tyrosine/nicotianamin 99.9 2.6E-24 5.7E-29 219.5 33.8 337 99-469 51-427 (430)
172 PRK09147 succinyldiaminopimela 99.9 4.6E-24 1E-28 216.3 35.1 331 99-465 28-395 (396)
173 PLN03026 histidinol-phosphate 99.9 4.7E-24 1E-28 214.7 34.4 318 99-463 51-379 (380)
174 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 9E-24 2E-28 211.3 35.9 315 117-463 7-354 (355)
175 TIGR01264 tyr_amTase_E tyrosin 99.9 3.9E-24 8.4E-29 217.3 33.5 335 99-467 30-400 (401)
176 cd00609 AAT_like Aspartate ami 99.9 4.9E-24 1.1E-28 212.4 33.5 297 144-461 34-349 (350)
177 PRK13355 bifunctional HTH-doma 99.9 4.6E-24 1E-28 222.9 34.6 338 97-467 143-515 (517)
178 PRK07590 L,L-diaminopimelate a 99.9 1.7E-24 3.6E-29 220.4 30.3 339 99-463 33-408 (409)
179 PRK06107 aspartate aminotransf 99.9 5.8E-24 1.3E-28 215.9 34.0 337 99-467 32-401 (402)
180 PRK09295 bifunctional cysteine 99.9 5.3E-24 1.1E-28 216.7 33.6 336 99-466 23-404 (406)
181 PRK07337 aminotransferase; Val 99.9 5.4E-24 1.2E-28 215.4 33.5 331 99-464 29-387 (388)
182 cd06453 SufS_like Cysteine des 99.9 3.2E-24 6.9E-29 216.0 31.6 322 112-460 7-373 (373)
183 PRK07865 N-succinyldiaminopime 99.9 4.3E-24 9.3E-29 214.2 31.6 318 99-461 26-363 (364)
184 PTZ00433 tyrosine aminotransfe 99.9 9E-24 1.9E-28 215.1 34.3 336 99-468 32-410 (412)
185 PLN02187 rooty/superroot1 99.9 9.3E-24 2E-28 216.9 34.5 345 99-473 65-445 (462)
186 PRK08363 alanine aminotransfer 99.9 5.2E-24 1.1E-28 216.1 32.1 335 99-467 29-395 (398)
187 TIGR03538 DapC_gpp succinyldia 99.9 5.4E-24 1.2E-28 215.6 32.2 329 99-463 27-392 (393)
188 TIGR01265 tyr_nico_aTase tyros 99.9 1.2E-23 2.5E-28 213.8 34.1 336 99-467 30-402 (403)
189 PLN02656 tyrosine transaminase 99.9 7.6E-24 1.6E-28 215.4 32.1 335 99-467 30-404 (409)
190 TIGR03539 DapC_actino succinyl 99.9 1.1E-23 2.5E-28 210.4 32.8 317 99-460 20-356 (357)
191 PRK09265 aminotransferase AlaT 99.9 1.9E-23 4.2E-28 212.3 35.0 334 99-467 32-402 (404)
192 PRK07550 hypothetical protein; 99.9 2.4E-23 5.2E-28 210.5 35.2 332 99-463 28-384 (386)
193 TIGR02326 transamin_PhnW 2-ami 99.9 4.9E-23 1.1E-27 206.6 36.6 315 117-465 11-361 (363)
194 PRK06855 aminotransferase; Val 99.9 1.4E-23 3.1E-28 214.5 33.3 338 99-466 31-429 (433)
195 PRK07568 aspartate aminotransf 99.9 3.9E-23 8.4E-28 209.9 36.1 296 147-468 67-394 (397)
196 PRK05664 threonine-phosphate d 99.9 3.8E-23 8.3E-28 204.2 35.0 300 100-466 20-328 (330)
197 PRK03321 putative aminotransfe 99.9 8.9E-24 1.9E-28 211.0 30.5 314 101-465 23-350 (352)
198 PLN02855 Bifunctional selenocy 99.9 1.2E-23 2.7E-28 215.1 32.3 337 99-467 32-419 (424)
199 TIGR03542 DAPAT_plant LL-diami 99.9 1.2E-23 2.7E-28 213.5 31.5 339 99-463 32-401 (402)
200 COG0520 csdA Selenocysteine ly 99.9 2.8E-23 6E-28 207.8 33.3 334 100-465 23-404 (405)
201 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.4E-23 5.3E-28 209.6 33.1 327 99-462 22-372 (373)
202 PLN02376 1-aminocyclopropane-1 99.9 2.4E-23 5.1E-28 215.0 33.4 308 145-468 93-440 (496)
203 PRK14807 histidinol-phosphate 99.9 9E-23 2E-27 203.5 36.2 316 102-464 24-350 (351)
204 PRK13479 2-aminoethylphosphona 99.9 1.5E-22 3.2E-27 203.5 37.9 320 117-468 13-365 (368)
205 PLN00143 tyrosine/nicotianamin 99.9 6.1E-23 1.3E-27 208.6 35.0 336 99-468 31-406 (409)
206 PTZ00094 serine hydroxymethylt 99.9 1.8E-23 3.9E-28 214.7 30.9 338 100-467 34-409 (452)
207 KOG0257 Kynurenine aminotransf 99.9 3.7E-24 8.1E-29 203.9 23.8 324 117-461 46-414 (420)
208 PRK04870 histidinol-phosphate 99.9 4.6E-23 1E-27 206.1 33.0 318 99-463 25-355 (356)
209 PLN02450 1-aminocyclopropane-1 99.9 4.4E-23 9.4E-28 212.3 33.0 304 147-468 87-432 (468)
210 PRK06959 putative threonine-ph 99.9 8.8E-23 1.9E-27 202.1 33.6 303 100-468 24-335 (339)
211 PRK13238 tnaA tryptophanase/L- 99.9 1.8E-22 3.8E-27 206.2 36.6 342 99-466 35-433 (460)
212 PRK09105 putative aminotransfe 99.9 9.4E-23 2E-27 204.4 34.0 314 100-464 43-368 (370)
213 PLN02409 serine--glyoxylate am 99.9 2.1E-22 4.5E-27 204.1 36.7 325 117-470 17-376 (401)
214 PRK14809 histidinol-phosphate 99.9 1.1E-22 2.3E-27 203.5 34.1 314 99-465 29-356 (357)
215 PRK06425 histidinol-phosphate 99.9 8.3E-23 1.8E-27 202.1 32.8 282 147-464 41-331 (332)
216 TIGR01140 L_thr_O3P_dcar L-thr 99.9 9.5E-23 2.1E-27 201.5 33.1 272 149-460 50-329 (330)
217 TIGR01977 am_tr_V_EF2568 cyste 99.9 5.6E-23 1.2E-27 207.3 31.3 318 117-462 13-375 (376)
218 PLN02607 1-aminocyclopropane-1 99.9 1.1E-22 2.4E-27 207.8 33.5 306 147-468 96-439 (447)
219 TIGR03402 FeS_nifS cysteine de 99.9 5.2E-23 1.1E-27 207.6 30.7 326 112-468 7-374 (379)
220 PRK08056 threonine-phosphate d 99.9 2.2E-22 4.8E-27 201.1 34.7 317 99-464 19-353 (356)
221 PRK06358 threonine-phosphate d 99.9 4.3E-22 9.3E-27 198.7 35.5 318 100-464 19-353 (354)
222 PLN02231 alanine transaminase 99.9 2.6E-22 5.7E-27 208.4 35.1 339 117-472 142-533 (534)
223 PRK07392 threonine-phosphate d 99.9 4.8E-22 1E-26 199.0 35.4 319 100-464 22-357 (360)
224 PLN02672 methionine S-methyltr 99.9 3.4E-22 7.3E-27 216.8 36.4 337 99-466 696-1080(1082)
225 PRK06836 aspartate aminotransf 99.9 4.2E-22 9.1E-27 201.8 34.8 329 99-467 32-392 (394)
226 PRK05166 histidinol-phosphate 99.9 5.4E-22 1.2E-26 199.4 35.0 321 99-464 35-369 (371)
227 TIGR01814 kynureninase kynuren 99.9 2.7E-22 5.8E-27 204.0 33.0 326 100-464 28-405 (406)
228 TIGR02006 IscS cysteine desulf 99.9 1.3E-22 2.7E-27 206.1 30.3 334 100-468 4-379 (402)
229 PRK05839 hypothetical protein; 99.9 6E-22 1.3E-26 199.1 33.8 323 99-465 23-373 (374)
230 PRK02610 histidinol-phosphate 99.9 9.2E-22 2E-26 197.9 34.2 321 100-467 28-372 (374)
231 COG1104 NifS Cysteine sulfinat 99.9 4E-22 8.8E-27 192.1 29.1 323 116-469 13-380 (386)
232 cd00616 AHBA_syn 3-amino-5-hyd 99.9 8.5E-22 1.8E-26 196.8 32.3 298 122-461 3-352 (352)
233 cd00614 CGS_like CGS_like: Cys 99.9 9.6E-23 2.1E-27 204.2 25.2 283 144-464 38-368 (369)
234 PRK07908 hypothetical protein; 99.9 2.8E-21 6.1E-26 192.7 34.7 320 99-466 21-347 (349)
235 PF00266 Aminotran_5: Aminotra 99.9 1.6E-21 3.5E-26 196.1 32.5 317 112-456 7-371 (371)
236 PRK03967 histidinol-phosphate 99.9 2E-21 4.4E-26 192.5 32.5 310 99-468 17-336 (337)
237 PLN02242 methionine gamma-lyas 99.9 4.1E-22 8.8E-27 201.5 27.7 244 144-419 74-347 (418)
238 TIGR01437 selA_rel uncharacter 99.9 2.8E-21 6E-26 192.9 32.7 321 99-463 7-362 (363)
239 TIGR03403 nifS_epsilon cystein 99.9 2.2E-21 4.7E-26 196.0 32.0 322 116-468 11-377 (382)
240 PRK14808 histidinol-phosphate 99.9 1.5E-21 3.1E-26 193.2 29.9 307 99-462 18-333 (335)
241 cd06450 DOPA_deC_like DOPA dec 99.9 6.8E-22 1.5E-26 197.0 26.4 277 144-462 36-344 (345)
242 PTZ00376 aspartate aminotransf 99.9 2.6E-21 5.6E-26 196.5 30.3 333 100-466 29-403 (404)
243 PRK14012 cysteine desulfurase; 99.9 1.3E-21 2.9E-26 198.8 27.5 332 100-468 4-381 (404)
244 PLN02397 aspartate transaminas 99.9 4.7E-21 1E-25 195.3 31.0 332 99-465 47-420 (423)
245 TIGR01328 met_gam_lyase methio 99.9 2.8E-21 6E-26 194.4 28.7 212 145-388 58-277 (391)
246 PRK01688 histidinol-phosphate 99.9 4E-21 8.6E-26 191.5 29.0 278 148-460 59-350 (351)
247 PRK04781 histidinol-phosphate 99.9 1.6E-20 3.6E-25 187.9 33.4 283 148-464 61-361 (364)
248 KOG1405 4-aminobutyrate aminot 99.9 8.4E-22 1.8E-26 182.5 21.7 352 66-466 57-483 (484)
249 PRK06234 methionine gamma-lyas 99.9 3.5E-21 7.7E-26 194.4 28.3 212 145-388 63-284 (400)
250 cd00617 Tnase_like Tryptophana 99.9 1.8E-20 4E-25 188.8 32.8 321 119-467 33-409 (431)
251 PLN02651 cysteine desulfurase 99.9 3.4E-21 7.5E-26 193.1 26.9 310 113-454 8-364 (364)
252 COG2008 GLY1 Threonine aldolas 99.9 1E-21 2.3E-26 185.3 21.3 326 103-464 2-341 (342)
253 PRK05968 hypothetical protein; 99.9 7.5E-21 1.6E-25 191.3 28.5 285 144-462 61-386 (389)
254 PRK04635 histidinol-phosphate 99.9 2.1E-20 4.5E-25 186.7 31.5 278 148-463 62-352 (354)
255 PRK08354 putative aminotransfe 99.9 4.6E-20 9.9E-25 180.8 33.1 293 100-463 8-309 (311)
256 PRK04366 glycine dehydrogenase 99.9 1.9E-20 4.2E-25 193.2 31.6 298 141-469 108-451 (481)
257 COG0075 Serine-pyruvate aminot 99.9 1.6E-19 3.5E-24 175.6 36.0 326 117-473 13-370 (383)
258 PRK06767 methionine gamma-lyas 99.9 9.6E-21 2.1E-25 190.6 27.7 284 145-465 60-384 (386)
259 PRK09257 aromatic amino acid a 99.9 1.9E-20 4.2E-25 189.8 29.3 288 145-463 68-395 (396)
260 KOG0259 Tyrosine aminotransfer 99.9 5.9E-20 1.3E-24 172.3 29.7 335 99-468 60-435 (447)
261 KOG1368 Threonine aldolase [Am 99.9 6.1E-21 1.3E-25 173.2 22.3 333 99-467 20-370 (384)
262 PRK08249 cystathionine gamma-s 99.9 7.6E-20 1.6E-24 184.2 32.0 211 144-388 62-280 (398)
263 TIGR01324 cysta_beta_ly_B cyst 99.9 2.4E-20 5.2E-25 186.3 28.1 283 145-465 49-375 (377)
264 PRK09440 avtA valine--pyruvate 99.9 3.5E-20 7.7E-25 189.2 29.9 292 147-467 75-412 (416)
265 PRK09275 aspartate aminotransf 99.9 2E-20 4.3E-25 191.9 27.8 296 149-472 137-523 (527)
266 TIGR03235 DNA_S_dndA cysteine 99.9 9.3E-21 2E-25 189.3 23.8 310 113-454 7-346 (353)
267 KOG0256 1-aminocyclopropane-1- 99.9 7.2E-20 1.6E-24 173.3 28.0 300 149-467 124-462 (471)
268 PRK08637 hypothetical protein; 99.9 2.2E-19 4.8E-24 181.5 33.9 322 118-467 19-387 (388)
269 TIGR01325 O_suc_HS_sulf O-succ 99.9 5.1E-20 1.1E-24 185.0 27.5 210 145-388 53-270 (380)
270 TIGR03588 PseC UDP-4-keto-6-de 99.9 3.2E-19 7E-24 179.9 32.7 310 119-464 11-380 (380)
271 PRK08133 O-succinylhomoserine 99.9 1.2E-19 2.6E-24 182.7 28.8 210 145-388 60-277 (390)
272 PRK06460 hypothetical protein; 99.9 2.1E-19 4.6E-24 180.0 29.4 211 144-388 43-261 (376)
273 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.1E-18 2.3E-23 174.8 33.9 306 118-464 11-375 (376)
274 PRK00451 glycine dehydrogenase 99.9 1.5E-19 3.2E-24 186.3 28.4 290 143-464 109-446 (447)
275 PRK07503 methionine gamma-lyas 99.9 6.2E-19 1.3E-23 178.1 31.9 212 145-388 64-283 (403)
276 PRK08247 cystathionine gamma-s 99.9 1.8E-19 3.9E-24 180.2 27.7 284 144-466 50-364 (366)
277 PRK07504 O-succinylhomoserine 99.9 2E-19 4.4E-24 181.4 27.5 210 145-388 64-282 (398)
278 TIGR01788 Glu-decarb-GAD gluta 99.9 8.9E-19 1.9E-23 177.0 31.8 328 117-467 54-430 (431)
279 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.8E-18 3.8E-23 174.0 33.9 306 118-464 14-377 (379)
280 PRK07810 O-succinylhomoserine 99.9 5.5E-19 1.2E-23 178.2 30.3 210 145-388 69-287 (403)
281 TIGR03801 asp_4_decarbox aspar 99.9 2.9E-19 6.3E-24 183.1 27.8 275 164-468 157-518 (521)
282 COG0399 WecE Predicted pyridox 99.9 2.6E-18 5.6E-23 167.5 32.7 306 119-466 16-373 (374)
283 PRK08574 cystathionine gamma-s 99.9 1.6E-19 3.5E-24 181.1 24.9 210 145-388 52-269 (385)
284 COG1103 Archaea-specific pyrid 99.9 3.1E-18 6.7E-23 153.7 30.1 320 118-467 27-381 (382)
285 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2.6E-18 5.5E-23 172.7 33.0 304 120-464 13-374 (375)
286 PLN02368 alanine transaminase 99.8 6.1E-19 1.3E-23 178.0 27.2 255 147-411 108-401 (407)
287 PRK07811 cystathionine gamma-s 99.8 6.7E-19 1.4E-23 177.1 27.2 210 145-388 60-278 (388)
288 PLN02509 cystathionine beta-ly 99.8 1.4E-18 3.1E-23 176.5 27.2 208 146-388 133-349 (464)
289 PRK07050 cystathionine beta-ly 99.8 9.5E-19 2.1E-23 176.1 25.6 284 145-466 64-391 (394)
290 PRK09028 cystathionine beta-ly 99.8 2E-18 4.3E-23 172.5 27.0 209 146-388 61-277 (394)
291 PLN02414 glycine dehydrogenase 99.8 2.5E-18 5.4E-23 186.6 29.6 300 142-468 564-909 (993)
292 PF01041 DegT_DnrJ_EryC1: DegT 99.8 5.7E-18 1.2E-22 169.5 30.1 302 119-461 6-363 (363)
293 PRK02769 histidine decarboxyla 99.8 1.2E-17 2.5E-22 166.7 31.9 289 144-466 63-372 (380)
294 PRK08064 cystathionine beta-ly 99.8 2E-18 4.3E-23 173.8 26.5 281 145-463 53-383 (390)
295 TIGR01329 cysta_beta_ly_E cyst 99.8 2.6E-18 5.7E-23 172.2 27.1 283 146-467 47-376 (378)
296 PRK08776 cystathionine gamma-s 99.8 8.3E-18 1.8E-22 169.6 30.5 211 144-388 58-277 (405)
297 PRK08114 cystathionine beta-ly 99.8 3E-18 6.4E-23 170.7 26.7 210 145-388 61-280 (395)
298 PLN03032 serine decarboxylase; 99.8 1.1E-17 2.4E-22 165.6 30.6 312 118-462 37-372 (374)
299 PRK07049 methionine gamma-lyas 99.8 1E-17 2.2E-22 170.2 30.3 215 145-388 82-311 (427)
300 KOG0634 Aromatic amino acid am 99.8 7.7E-18 1.7E-22 160.9 27.2 313 149-467 103-467 (472)
301 PRK05939 hypothetical protein; 99.8 5.7E-18 1.2E-22 170.4 28.0 211 145-388 46-284 (397)
302 PRK06084 O-acetylhomoserine am 99.8 1E-17 2.2E-22 169.9 28.6 210 145-388 57-308 (425)
303 PRK08861 cystathionine gamma-s 99.8 1.3E-17 2.8E-22 166.8 28.3 210 145-388 52-270 (388)
304 PRK08045 cystathionine gamma-s 99.8 1.7E-17 3.7E-22 166.5 28.9 210 145-388 51-269 (386)
305 PRK07812 O-acetylhomoserine am 99.8 9.3E-18 2E-22 170.1 27.2 285 145-467 68-432 (436)
306 PRK05967 cystathionine beta-ly 99.8 1.3E-17 2.8E-22 166.3 27.7 211 144-388 62-280 (395)
307 COG0112 GlyA Glycine/serine hy 99.8 2.4E-17 5.3E-22 156.6 27.5 337 100-468 26-392 (413)
308 PRK15407 lipopolysaccharide bi 99.8 6.2E-17 1.3E-21 164.8 32.6 286 146-465 63-435 (438)
309 PRK03080 phosphoserine aminotr 99.8 1.4E-17 3E-22 167.4 27.2 290 144-468 46-375 (378)
310 PRK07269 cystathionine gamma-s 99.8 1.3E-17 2.7E-22 166.0 26.5 281 145-464 53-362 (364)
311 PLN02271 serine hydroxymethylt 99.8 2.8E-17 6.1E-22 165.8 28.7 321 118-465 162-539 (586)
312 PRK06176 cystathionine gamma-s 99.8 1.9E-17 4E-22 165.9 27.1 284 145-467 49-379 (380)
313 PRK07671 cystathionine beta-ly 99.8 1.9E-17 4.1E-22 165.9 26.6 209 145-388 49-266 (377)
314 PRK07582 cystathionine gamma-l 99.8 5.2E-17 1.1E-21 162.3 29.6 276 145-461 50-364 (366)
315 TIGR03531 selenium_SpcS O-phos 99.8 9.3E-17 2E-21 161.6 31.4 296 145-463 104-443 (444)
316 PRK05994 O-acetylhomoserine am 99.8 3.2E-17 7E-22 166.6 27.8 211 146-388 63-312 (427)
317 TIGR02080 O_succ_thio_ly O-suc 99.8 3.7E-17 8E-22 163.9 27.5 210 145-388 50-268 (382)
318 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 3.2E-17 7E-22 166.6 26.4 155 145-322 56-217 (418)
319 KOG1549 Cysteine desulfurase N 99.8 5.7E-17 1.2E-21 157.1 25.9 334 99-468 43-420 (428)
320 PLN02590 probable tyrosine dec 99.8 3.6E-16 7.7E-21 161.1 33.3 305 145-468 169-534 (539)
321 PRK08134 O-acetylhomoserine am 99.8 1.3E-16 2.7E-21 162.0 29.4 211 145-388 63-313 (433)
322 PRK06702 O-acetylhomoserine am 99.8 7.2E-17 1.6E-21 162.6 27.0 210 145-388 60-310 (432)
323 PRK08248 O-acetylhomoserine am 99.8 7.5E-17 1.6E-21 163.7 27.0 210 145-388 63-313 (431)
324 KOG2862 Alanine-glyoxylate ami 99.8 1E-15 2.2E-20 140.3 30.5 319 117-467 25-383 (385)
325 PLN02880 tyrosine decarboxylas 99.8 3.1E-16 6.7E-21 161.5 30.5 308 144-468 120-486 (490)
326 TIGR02618 tyr_phenol_ly tyrosi 99.8 1.1E-15 2.4E-20 151.8 32.6 301 144-467 69-427 (450)
327 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 3.7E-16 8.1E-21 155.4 29.4 283 145-465 54-386 (386)
328 PRK04311 selenocysteine syntha 99.8 5.8E-16 1.3E-20 157.5 31.3 321 116-465 98-463 (464)
329 PLN02724 Molybdenum cofactor s 99.8 4.1E-16 9E-21 170.4 32.4 306 145-466 77-488 (805)
330 PRK05613 O-acetylhomoserine am 99.8 8.5E-17 1.9E-21 163.1 24.9 210 145-388 68-322 (437)
331 PRK12566 glycine dehydrogenase 99.8 1.9E-16 4.1E-21 168.8 28.1 298 142-467 539-877 (954)
332 TIGR00461 gcvP glycine dehydro 99.8 5.7E-16 1.2E-20 166.3 31.5 298 143-468 527-869 (939)
333 PRK13237 tyrosine phenol-lyase 99.8 3.1E-15 6.8E-20 148.9 34.3 300 145-467 77-434 (460)
334 cd00615 Orn_deC_like Ornithine 99.8 2.1E-17 4.6E-22 160.5 18.5 220 145-386 58-293 (294)
335 cd00611 PSAT_like Phosphoserin 99.8 1.3E-16 2.8E-21 159.1 24.2 312 112-463 6-353 (355)
336 TIGR01364 serC_1 phosphoserine 99.8 5.1E-16 1.1E-20 153.8 27.9 312 117-466 4-348 (349)
337 TIGR00474 selA seryl-tRNA(sec) 99.8 1.4E-15 3.1E-20 154.3 31.5 325 111-460 88-453 (454)
338 PLN02263 serine decarboxylase 99.8 2.5E-15 5.4E-20 151.0 31.3 291 144-467 131-444 (470)
339 PRK05367 glycine dehydrogenase 99.7 9.1E-16 2E-20 167.6 30.1 298 143-468 539-877 (954)
340 PRK05355 3-phosphoserine/phosp 99.7 1.3E-15 2.9E-20 151.6 28.5 314 112-466 10-358 (360)
341 TIGR01366 serC_3 phosphoserine 99.7 4.8E-16 1E-20 155.0 25.2 289 144-467 39-361 (361)
342 PF00464 SHMT: Serine hydroxym 99.7 1E-15 2.2E-20 151.0 23.4 329 100-459 20-398 (399)
343 PRK15029 arginine decarboxylas 99.7 3.6E-15 7.9E-20 158.0 28.8 303 145-466 204-604 (755)
344 TIGR03799 NOD_PanD_pyr putativ 99.7 1.3E-14 2.8E-19 149.9 31.9 281 164-459 162-518 (522)
345 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 2.3E-15 5E-20 149.0 20.3 224 145-387 65-316 (417)
346 COG0626 MetC Cystathionine bet 99.7 4E-14 8.6E-19 139.2 28.2 287 145-467 62-395 (396)
347 PRK06434 cystathionine gamma-l 99.7 1.1E-14 2.3E-19 145.4 24.4 238 144-418 62-320 (384)
348 PF01212 Beta_elim_lyase: Beta 99.7 1.4E-16 3.1E-21 152.5 8.5 256 116-397 7-279 (290)
349 COG3977 Alanine-alpha-ketoisov 99.7 4.1E-14 8.8E-19 129.2 23.7 335 102-467 32-412 (417)
350 COG2873 MET17 O-acetylhomoseri 99.7 2.7E-14 5.9E-19 134.5 22.8 162 134-321 53-222 (426)
351 PRK15400 lysine decarboxylase 99.7 2.7E-13 5.8E-18 142.3 31.9 293 145-465 194-558 (714)
352 PRK13578 ornithine decarboxyla 99.6 1.5E-13 3.3E-18 144.3 28.6 303 145-466 173-565 (720)
353 cd01494 AAT_I Aspartate aminot 99.6 6.4E-15 1.4E-19 130.6 15.2 160 149-323 3-170 (170)
354 KOG0053 Cystathionine beta-lya 99.6 1.1E-13 2.3E-18 134.3 23.9 283 147-467 78-407 (409)
355 TIGR02617 tnaA_trp_ase tryptop 99.6 3.6E-13 7.8E-18 132.6 27.5 307 143-467 71-442 (467)
356 COG3844 Kynureninase [Amino ac 99.6 1.9E-13 4E-18 126.5 23.8 330 99-468 31-404 (407)
357 PRK15399 lysine decarboxylase 99.6 3.8E-13 8.3E-18 141.2 29.2 297 145-465 194-558 (713)
358 TIGR01365 serC_2 phosphoserine 99.6 2.4E-13 5.3E-18 134.8 26.3 285 144-466 37-373 (374)
359 COG0076 GadB Glutamate decarbo 99.6 8.4E-13 1.8E-17 134.1 29.2 290 117-427 75-402 (460)
360 PRK05367 glycine dehydrogenase 99.6 4.7E-13 1E-17 146.5 28.5 279 142-461 117-437 (954)
361 PLN02414 glycine dehydrogenase 99.6 5.3E-13 1.2E-17 145.5 28.1 283 143-462 145-465 (993)
362 KOG0633 Histidinol phosphate a 99.6 2.8E-13 6E-18 121.4 19.3 283 149-463 72-374 (375)
363 PLN02452 phosphoserine transam 99.5 5.3E-12 1.2E-16 125.2 27.6 324 100-466 6-363 (365)
364 COG1003 GcvP Glycine cleavage 99.5 9.7E-12 2.1E-16 119.6 23.4 298 143-469 106-450 (496)
365 PF00282 Pyridoxal_deC: Pyrido 99.5 7.4E-12 1.6E-16 124.9 23.3 241 149-405 82-372 (373)
366 COG1982 LdcC Arginine/lysine/o 99.5 1.3E-11 2.7E-16 124.9 24.0 284 147-461 71-403 (557)
367 KOG0258 Alanine aminotransfera 99.4 2.7E-11 5.8E-16 114.8 22.4 305 145-471 112-474 (475)
368 PF12897 Aminotran_MocR: Alani 99.4 2.6E-10 5.7E-15 109.0 27.6 304 139-467 62-416 (425)
369 COG1448 TyrB Aspartate/tyrosin 99.4 7.3E-11 1.6E-15 112.5 23.2 326 100-463 26-395 (396)
370 TIGR00461 gcvP glycine dehydro 99.4 2.8E-10 6.1E-15 122.9 28.6 278 142-461 105-426 (939)
371 KOG2467 Glycine/serine hydroxy 99.3 5.2E-10 1.1E-14 105.3 24.2 320 119-465 55-425 (477)
372 TIGR03811 tyr_de_CO2_Ent tyros 99.3 1.5E-09 3.3E-14 113.4 29.4 299 109-421 85-522 (608)
373 PRK12462 phosphoserine aminotr 99.3 1.9E-09 4.2E-14 106.0 28.5 320 103-466 6-362 (364)
374 COG0403 GcvP Glycine cleavage 99.3 3.6E-09 7.9E-14 102.2 27.2 284 143-463 117-447 (450)
375 KOG0629 Glutamate decarboxylas 99.3 1.6E-09 3.4E-14 104.2 23.1 303 149-465 144-508 (510)
376 PF02347 GDC-P: Glycine cleava 99.3 2.4E-10 5.2E-15 113.5 18.1 276 142-460 106-429 (429)
377 KOG1383 Glutamate decarboxylas 99.2 1.7E-09 3.6E-14 105.4 21.6 327 117-473 93-453 (491)
378 COG1921 SelA Selenocysteine sy 99.2 9.1E-10 2E-14 106.8 19.7 228 111-359 34-270 (395)
379 PF06838 Met_gamma_lyase: Meth 99.2 1.5E-08 3.4E-13 96.4 24.4 250 142-421 49-333 (403)
380 PF05889 SLA_LP_auto_ag: Solub 99.2 1.4E-08 3E-13 98.6 23.7 289 155-465 65-389 (389)
381 COG3033 TnaA Tryptophanase [Am 99.1 1.3E-07 2.8E-12 89.3 25.1 338 99-466 45-444 (471)
382 PF03841 SelA: L-seryl-tRNA se 99.1 3.8E-10 8.2E-15 108.6 7.8 252 117-388 19-296 (367)
383 PRK12566 glycine dehydrogenase 99.0 6.1E-08 1.3E-12 104.6 24.8 276 142-461 120-439 (954)
384 KOG2040 Glycine dehydrogenase 99.0 1.6E-08 3.5E-13 101.7 18.8 296 143-467 579-919 (1001)
385 KOG3846 L-kynurenine hydrolase 99.0 2.1E-07 4.5E-12 86.0 22.4 334 99-468 65-463 (465)
386 KOG0628 Aromatic-L-amino-acid/ 98.8 3E-06 6.6E-11 82.8 24.0 298 144-468 107-473 (511)
387 KOG1412 Aspartate aminotransfe 98.5 1E-05 2.2E-10 75.3 17.2 276 165-469 103-408 (410)
388 COG1932 SerC Phosphoserine ami 98.5 5.5E-05 1.2E-09 72.6 22.8 321 102-467 6-364 (365)
389 COG4100 Cystathionine beta-lya 98.5 2.9E-05 6.2E-10 72.0 19.4 249 143-421 61-344 (416)
390 PF04864 Alliinase_C: Allinase 98.3 4.4E-06 9.5E-11 79.4 11.4 279 148-462 45-361 (363)
391 KOG2040 Glycine dehydrogenase 98.0 0.0015 3.3E-08 66.8 21.3 278 149-461 166-478 (1001)
392 KOG1411 Aspartate aminotransfe 97.9 8.2E-05 1.8E-09 70.4 10.8 284 149-465 98-424 (427)
393 KOG3843 Predicted serine hydro 97.7 0.0028 6E-08 58.0 15.5 303 149-473 60-409 (432)
394 KOG2790 Phosphoserine aminotra 94.5 4.3 9.4E-05 38.2 21.4 323 99-466 5-368 (370)
395 PLN02994 1-aminocyclopropane-1 94.3 0.14 3.1E-06 44.2 6.6 48 149-196 95-152 (153)
396 PRK13397 3-deoxy-7-phosphohept 81.8 23 0.0005 33.2 11.3 57 216-280 134-194 (250)
397 PRK13396 3-deoxy-7-phosphohept 79.5 26 0.00056 34.7 11.3 56 216-281 220-282 (352)
398 PRK12595 bifunctional 3-deoxy- 74.4 40 0.00087 33.6 11.3 79 193-280 212-297 (360)
399 TIGR01361 DAHP_synth_Bsub phos 71.4 54 0.0012 31.0 10.9 58 216-281 144-205 (260)
400 COG2102 Predicted ATPases of P 60.2 68 0.0015 29.4 8.7 95 164-274 4-116 (223)
401 KOG0352 ATP-dependent DNA heli 56.2 40 0.00086 34.0 6.9 43 238-285 112-157 (641)
402 PF06506 PrpR_N: Propionate ca 51.9 1.3E+02 0.0029 26.3 9.3 106 152-278 45-151 (176)
403 COG0296 GlgB 1,4-alpha-glucan 49.1 17 0.00036 38.9 3.4 40 251-292 208-247 (628)
404 PRK08673 3-deoxy-7-phosphohept 48.9 2E+02 0.0043 28.4 10.6 57 216-280 212-272 (335)
405 PRK13398 3-deoxy-7-phosphohept 45.6 1.5E+02 0.0033 28.1 9.1 24 258-281 184-207 (266)
406 PF06877 RraB: Regulator of ri 44.0 1.2E+02 0.0027 23.8 7.1 89 381-471 9-99 (104)
407 PF06153 DUF970: Protein of un 40.7 38 0.00082 27.3 3.5 56 407-466 9-66 (109)
408 PF03652 UPF0081: Uncharacteri 40.6 1.1E+02 0.0023 25.8 6.4 53 216-280 39-98 (135)
409 COG2047 Uncharacterized protei 40.4 3E+02 0.0064 25.3 10.8 42 240-285 84-127 (258)
410 COG0108 RibB 3,4-dihydroxy-2-b 38.9 41 0.00089 30.2 3.7 35 240-275 156-190 (203)
411 COG1088 RfbB dTDP-D-glucose 4, 38.0 2E+02 0.0044 27.8 8.3 121 165-299 3-148 (340)
412 COG2870 RfaE ADP-heptose synth 37.0 74 0.0016 31.9 5.5 51 216-278 129-179 (467)
413 PF05368 NmrA: NmrA-like famil 36.6 1.6E+02 0.0036 26.8 7.8 75 186-274 24-98 (233)
414 PRK03892 ribonuclease P protei 36.1 3.4E+02 0.0073 24.7 9.7 109 153-275 52-171 (216)
415 TIGR00162 conserved hypothetic 35.4 2.6E+02 0.0056 25.0 8.4 42 240-285 15-58 (188)
416 KOG1465 Translation initiation 35.2 4.2E+02 0.0092 25.6 10.8 109 152-275 153-269 (353)
417 COG0075 Serine-pyruvate aminot 34.3 3.3E+02 0.0072 27.4 9.7 143 115-280 31-193 (383)
418 PF13872 AAA_34: P-loop contai 33.5 28 0.0006 33.6 2.0 27 258-284 160-187 (303)
419 smart00642 Aamy Alpha-amylase 33.2 31 0.00067 30.2 2.1 27 254-280 67-93 (166)
420 PF10087 DUF2325: Uncharacteri 32.3 2.2E+02 0.0047 22.1 6.7 65 195-276 12-81 (97)
421 PF02603 Hpr_kinase_N: HPr Ser 32.0 40 0.00088 27.9 2.5 47 216-277 66-112 (127)
422 COG0514 RecQ Superfamily II DN 30.4 96 0.0021 33.1 5.5 114 161-290 33-152 (590)
423 PRK13028 tryptophan synthase s 30.2 5.9E+02 0.013 25.9 10.9 59 156-214 105-168 (402)
424 TIGR03853 matur_matur probable 28.8 77 0.0017 23.7 3.2 44 149-192 21-65 (77)
425 PF10678 DUF2492: Protein of u 28.7 77 0.0017 23.8 3.2 44 149-192 23-67 (78)
426 PLN03244 alpha-amylase; Provis 27.9 66 0.0014 35.4 3.8 33 254-288 438-470 (872)
427 PRK10886 DnaA initiator-associ 27.6 2.1E+02 0.0045 25.8 6.5 25 251-275 117-141 (196)
428 PRK08335 translation initiatio 27.5 5.5E+02 0.012 24.5 10.5 111 150-275 98-216 (275)
429 TIGR00250 RNAse_H_YqgF RNAse H 27.4 1.6E+02 0.0034 24.5 5.3 53 216-280 36-94 (130)
430 TIGR00196 yjeF_cterm yjeF C-te 27.4 2.7E+02 0.006 26.3 7.8 33 241-277 94-126 (272)
431 COG0133 TrpB Tryptophan syntha 27.0 4.1E+02 0.0088 26.1 8.4 92 154-253 96-195 (396)
432 PRK04346 tryptophan synthase s 27.0 6.8E+02 0.015 25.4 10.7 71 156-226 101-179 (397)
433 PRK11633 cell division protein 27.0 2.2E+02 0.0048 26.3 6.6 57 405-463 157-213 (226)
434 PF07905 PucR: Purine cataboli 26.7 2.7E+02 0.0058 22.8 6.6 47 216-275 57-104 (123)
435 COG1349 GlpR Transcriptional r 26.5 5.4E+02 0.012 24.1 12.2 123 149-289 79-216 (253)
436 PRK00014 ribB 3,4-dihydroxy-2- 25.6 98 0.0021 28.6 4.0 33 241-274 173-205 (230)
437 COG3962 Acetolactate synthase 25.5 1.8E+02 0.0039 29.9 6.0 64 216-292 215-289 (617)
438 TIGR00506 ribB 3,4-dihydroxy-2 25.2 1E+02 0.0022 27.8 4.1 34 240-274 157-190 (199)
439 PF00926 DHBP_synthase: 3,4-di 24.4 1E+02 0.0022 27.8 3.8 35 240-275 152-186 (194)
440 PF10750 DUF2536: Protein of u 24.3 1.6E+02 0.0036 21.2 4.0 24 207-230 10-33 (68)
441 PRK00910 ribB 3,4-dihydroxy-2- 23.6 1.2E+02 0.0025 27.9 4.1 34 240-274 168-201 (218)
442 COG2961 ComJ Protein involved 23.2 6E+02 0.013 23.9 8.5 87 373-466 171-265 (279)
443 TIGR00511 ribulose_e2b2 ribose 22.9 7E+02 0.015 24.1 10.0 116 150-280 104-228 (301)
444 COG2089 SpsE Sialic acid synth 22.9 3.6E+02 0.0078 26.4 7.3 74 182-272 99-175 (347)
445 PF02639 DUF188: Uncharacteriz 22.6 2.6E+02 0.0057 23.3 5.7 30 163-192 30-59 (130)
446 PRK08535 translation initiatio 22.5 7.2E+02 0.016 24.2 10.5 116 150-280 109-233 (310)
447 KOG0630 Predicted pyridoxal-de 22.3 1.8E+02 0.0039 30.0 5.4 53 216-276 275-329 (838)
448 cd04915 ACT_AK-Ectoine_2 ACT d 22.2 3E+02 0.0064 19.5 5.7 49 409-464 16-64 (66)
449 COG0352 ThiE Thiamine monophos 21.8 71 0.0015 29.2 2.4 20 259-278 54-73 (211)
450 TIGR02035 D_Ser_am_lyase D-ser 21.7 3.7E+02 0.008 27.6 7.8 62 154-215 145-207 (431)
451 KOG3974 Predicted sugar kinase 21.6 3.3E+02 0.0072 25.7 6.5 38 241-278 102-140 (306)
452 PF00128 Alpha-amylase: Alpha 21.5 44 0.00096 31.9 1.1 23 258-280 53-75 (316)
453 PRK01792 ribB 3,4-dihydroxy-2- 21.4 1.3E+02 0.0029 27.4 4.0 33 241-274 168-200 (214)
454 PRK09802 DNA-binding transcrip 21.4 7E+02 0.015 23.6 9.7 45 148-193 93-138 (269)
455 PF00106 adh_short: short chai 21.3 3.7E+02 0.008 22.5 6.9 65 164-228 2-75 (167)
456 cd06447 D-Ser-dehyd D-Serine d 21.2 4.3E+02 0.0093 26.9 8.1 59 157-215 130-189 (404)
457 PLN02672 methionine S-methyltr 20.6 9.5E+02 0.021 28.0 11.3 117 149-280 429-567 (1082)
458 COG1707 ACT domain-containing 20.5 5.7E+02 0.012 22.3 7.3 101 150-275 73-173 (218)
459 TIGR00290 MJ0570_dom MJ0570-re 20.3 6.8E+02 0.015 23.0 9.1 93 164-273 4-114 (223)
460 PF02571 CbiJ: Precorrin-6x re 20.0 4.9E+02 0.011 24.4 7.7 95 165-274 3-97 (249)
No 1
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.7e-97 Score=698.59 Aligned_cols=477 Identities=60% Similarity=1.016 Sum_probs=462.0
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHhHHHHhhhcccC---CCCCCCCCcccccCcHHHHHHHHHhhhhcccCCCccCCCCce
Q 040324 2 IAIPYFTALTTYFSYGLLFVFGQFRDFFRKILDWW---STDNLQGYAPICLGLEDFYIRRLYNRVQDCFGRPLSSAPDAW 78 (488)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~ 78 (488)
+.+|+++++.||++|++|+++||+|||++++|.++ ..++++||+|+++.||+||.|++|+|++|||+|||+++||++
T Consensus 35 ~~~~~~v~l~ty~~y~~l~~~ghvrd~~~~~f~~~~~~~~~~~~g~~ply~~Fe~FY~Rriy~ri~Dc~~RPi~~VPG~~ 114 (519)
T KOG1357|consen 35 DTIPYLVALATYLSYLLLFVFGHVRDFFGKIFFVKKYKKDNEMDGYAPLYSSFESFYSRRIYRRIRDCFERPICSVPGAW 114 (519)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhhheehhhhcccccccCccchhhhHHHHHHHHHHHHHhHhhcCCCcCCCCce
Confidence 57899999999999999999999999999999744 346679999999999999999999999999999999999999
Q ss_pred EEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHH
Q 040324 79 FDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARF 158 (488)
Q Consensus 79 ~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~ 158 (488)
++.+||.++|+||+|++||+-.++||++||||+||++++..|.+++.+++++|+...++++...|+.+.+.++|+.+|++
T Consensus 115 v~l~dR~S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f 194 (519)
T KOG1357|consen 115 VDLMDRVSDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARF 194 (519)
T ss_pred EEeeeeeccCCCceEEeccceeeeeeecccccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCC
Q 040324 159 VGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRP 238 (488)
Q Consensus 159 ~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~ 238 (488)
+|+++++++++|+.+|...++.+.+|+..|++++.+|.++..+++++|+.++.++|||+++||++|++++..|||+||+|
T Consensus 195 ~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp 274 (519)
T KOG1357|consen 195 LGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHNDMQGLERLLRDAIVYGQPKTHRP 274 (519)
T ss_pred cCCcceEEEeccccccccCcceeecCCcceeeccccchheeccccccCceEEEEecCCHHHHHHHHHHHHhcCCCCcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCccc
Q 040324 239 WKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGG 318 (488)
Q Consensus 239 ~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg 318 (488)
|++++|++|+++||+|.++.|+++++++|||.++|+.||+|++|+.|++|++++++++++|.++||+|+||+|+||++||
T Consensus 275 ~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~GG 354 (519)
T KOG1357|consen 275 WKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAGG 354 (519)
T ss_pred chheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|++++++++++++.......++++++|+.+++.+.++++++++++++..++..+++++|+.+|+..|+..|+.+.++.++
T Consensus 355 yiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivyG~~dS 434 (519)
T KOG1357|consen 355 YIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVYGNNDS 434 (519)
T ss_pred eecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEecCCCC
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCCCCCCc
Q 040324 399 PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYFPAEPKK 478 (488)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~~~~~~ 478 (488)
|++|+++..+.+...+.++|++++|.++.++||++|.-+++.|||.|+.||+|++|++++.++++-+....++...++.+
T Consensus 435 pVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~~~~~~~~~~~~~ 514 (519)
T KOG1357|consen 435 PVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDEDGVKYVLPKPKY 514 (519)
T ss_pred CcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchhhcceeccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888887776665544
No 2
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=2.8e-83 Score=659.11 Aligned_cols=478 Identities=86% Similarity=1.399 Sum_probs=444.5
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHhHHHHhhhcccCCCCCCCCCcccccCcHHHHHHHHHhhhhcccCCCccCCCCceEE
Q 040324 1 MIAIPYFTALTTYFSYGLLFVFGQFRDFFRKILDWWSTDNLQGYAPICLGLEDFYIRRLYNRVQDCFGRPLSSAPDAWFD 80 (488)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~~ 80 (488)
|.++|++++++||++|++||++||+|||++++|.+....+++||+|++++||+||.|++|+|+.|||+|||++.||++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (489)
T PLN02483 1 MITIPYLTALTTYFSYGLLFAFGQLRDFFRAILDWWKTSNLQGYAPICLGLEDFYIRRLYLRIQDCFNRPIASAPDAWFD 80 (489)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCccccCHHHHHHHHhhhhcccccCCCCCCCCCCeEE
Confidence 46899999999999999999999999999999966555678999999999999999999999999999999999999999
Q ss_pred EeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC
Q 040324 81 VVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG 160 (488)
Q Consensus 81 ~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g 160 (488)
.+||.++|+||+++++++++++|||+||||||++++++.+.+++.+++++++.++++++..+|+.+.+.++|+++|+++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g 160 (489)
T PLN02483 81 VVERVSNDNNKTLKRTTKTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG 160 (489)
T ss_pred EEEeecCCCCceEEecCCCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred CCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 161 KPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 161 ~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
.++++++++|+.+|..++.++.++||.|+++.++|.++..+++.+|++++.++++|+++|++.+++.+..++|+||+|++
T Consensus 161 ~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 161 KPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred CCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCc
Confidence 99999999999999988889999999999999999999999999999999999999999999998877788899999999
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYI 320 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i 320 (488)
+++|++|++++++|.+.++++|+++|++||++||+||+|++|.+|++|++.++++++++.++||+++||||++|+.|||+
T Consensus 241 k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~GG~i 320 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCGGYI 320 (489)
T ss_pred eEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCceEE
Confidence 99999999999999999999999999999999999999999999999999889999988889999999999999999999
Q ss_pred EeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCe
Q 040324 321 AGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPV 400 (488)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 400 (488)
++++++++.++....+++++.+++|+.++++.++|+.+.++.+.+...+.+++++++.++|++.|+++|+++.++.++++
T Consensus 321 ~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~~~~~sp~ 400 (489)
T PLN02483 321 AGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVLGDNDSPV 400 (489)
T ss_pred EcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCCE
Confidence 99999999998876666677678888888899999988654444455677889999999999999999998877777899
Q ss_pred EEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCCCCCCc
Q 040324 401 MPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYFPAEPKK 478 (488)
Q Consensus 401 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~~~~~~ 478 (488)
+++.+..+.+..+++++|+++||.+.+.+||..|...+++||+++..+|+|||++++++|+++++.+++|+++...++
T Consensus 401 ~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~~~~~~~~~~ 478 (489)
T PLN02483 401 MPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGIKYFPAEPKK 478 (489)
T ss_pred EEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCceeccCCCCc
Confidence 999888877788999999999999999899888877789999999999999999999999999999999998776554
No 3
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=2.4e-62 Score=478.41 Aligned_cols=350 Identities=36% Similarity=0.667 Sum_probs=331.5
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
|++++||+||||||++++ |.+.+++.+++++||.+.+++|...|+.+.+.+||++||+|+|.|++++++||+.||..++
T Consensus 38 ~~~~~nf~SNdYLGLa~~-~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i 116 (388)
T COG0156 38 GRKVLNFCSNDYLGLASH-PELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGLL 116 (388)
T ss_pred CceeEeeeccCcccccCC-HHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHH
Confidence 799999999999999965 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC
Q 040324 179 PVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK 258 (488)
Q Consensus 179 ~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~ 258 (488)
.++.+++|.|+.|..+|.|+..++++++++++.++|||+++||+.|++... .++ ++.+|++|+||||+|++.|
T Consensus 117 ~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~------~~~-~~~~IvtegVfSMdGdiAp 189 (388)
T COG0156 117 SALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARE------NGA-RRKLIVTEGVFSMDGDIAP 189 (388)
T ss_pred HHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhc------cCC-CceEEEEeccccCCCCcCC
Confidence 999999999999999999999999999999999999999999999988432 223 5679999999999999999
Q ss_pred hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCCCc
Q 040324 259 LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHL 338 (488)
Q Consensus 259 l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~ 338 (488)
|++|+++|+||+++|++||+|++|.+|++|+|.++++|+.+.++||+++||||+||..|||++++..++++++..+++++
T Consensus 190 L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~Gg~v~g~~~~~d~L~~~ar~~i 269 (388)
T COG0156 190 LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYLRNRARPFI 269 (388)
T ss_pred HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccCceeeCcHHHHHHHHHhCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHH
Q 040324 339 YATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSREC 418 (488)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 418 (488)
|+++.+|..++++.++|+++. ...+++++++++..++++.++..|+.+ .+..++++|+.+.++..+.++...|
T Consensus 270 fStalpP~~aaa~~~al~~l~------~~~~~r~~L~~~~~~~~~~~~~~~~~~-~~s~s~I~pv~~gd~~~a~~~s~~l 342 (388)
T COG0156 270 FSTALPPAVAAAALAALRILE------EGPERRERLQELAAFFRSLLKALGLVL-LPSESPIIPVILGDEERALEASRAL 342 (388)
T ss_pred ccCCCCHHHHHHHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHhcCCcc-CCCCCCeeeeEeCCHHHHHHHHHHH
Confidence 999999999999999999985 567899999999999998888888776 4557899999999999999999999
Q ss_pred HHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 419 LKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 419 ~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
+++||.+.++.+|++|.+..++|+|+++.||++||+++++++.++
T Consensus 343 ~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 343 LEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred HHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999875
No 4
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=5e-56 Score=443.38 Aligned_cols=351 Identities=27% Similarity=0.421 Sum_probs=322.3
Q ss_pred cCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHh
Q 040324 96 TNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNS 175 (488)
Q Consensus 96 ~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~ 175 (488)
+++++++|||+||+|||+++ ||.+.+++.+++++||.+.++++...|+.+.+.+||++||+++|.|++++++||+.||.
T Consensus 98 ~~~~r~~l~FsSndYLGL~~-~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~AN~ 176 (476)
T PLN02955 98 KGRFKKLLLFSGNDYLGLSS-HPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAANM 176 (476)
T ss_pred cCCCceEEEeeccCccCCCC-CHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHHHH
Confidence 34578999999999999996 58999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhcc--------------cCCCcEEEEeCCCchHHHHHHHhc----CCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCC
Q 040324 176 SILPVL--------------MGKGSLIISDSLNHNSIVNGARGS----GATIRVFQHNTPSHLEEVLREQIAEGQPRTRR 237 (488)
Q Consensus 176 ~~~~~~--------------~~~~~~Vl~~~~~h~~~~~~~~~~----g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~ 237 (488)
.++.++ .++++.|+.|..+|.++..+++++ ++++..|+|||+++|+++|+...
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HND~~~Le~~L~~~~--------- 247 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHCDMYHLNSLLSSCK--------- 247 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCCCHHHHHHHHHhCC---------
Confidence 888776 367889999999999999999988 58889999999999999997631
Q ss_pred CCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc
Q 040324 238 PWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 238 ~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
...++|++|+||||+|.+.||++|+++|++||++||+||+|++|.+|++|+|.++++|+. .++||+++||+|++|..|
T Consensus 248 -~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~G 325 (476)
T PLN02955 248 -MKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHG 325 (476)
T ss_pred -CCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccC
Confidence 245688899999999999999999999999999999999999999999999999999997 578999999999999999
Q ss_pred cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC
Q 040324 318 GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND 397 (488)
Q Consensus 318 g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 397 (488)
|++++++++++.++....+++|+++.+|+.+++++++++++.. .+.++++++++.++|++. .|+++ .
T Consensus 326 Gfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~------~~~~r~~L~~n~~~fr~~---~G~~~----~ 392 (476)
T PLN02955 326 GFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK------EKWRRKAIWERVKEFKAL---SGVDI----S 392 (476)
T ss_pred ceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHh---cCCCC----C
Confidence 9999999999999998999999999999999999999998852 346788999999999984 46653 4
Q ss_pred CCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 040324 398 SPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKY 471 (488)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (488)
+|++++.+.++..+.+++++|+++||++.++.||++|.+..++||++++.||++||++++++|.++.+.++.++
T Consensus 393 sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~~~~~ 466 (476)
T PLN02955 393 SPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFDNTAT 466 (476)
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhhccee
Confidence 89999999999999999999999999999999999999999999999999999999999999999999988875
No 5
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-53 Score=383.61 Aligned_cols=351 Identities=30% Similarity=0.522 Sum_probs=324.9
Q ss_pred cCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHh
Q 040324 96 TNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNS 175 (488)
Q Consensus 96 ~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~ 175 (488)
+|..+++||||.|||||+.. ||++.+|-++++++||.+..+.++..|+..+|..||.+||++.+.|++++..+|+.||.
T Consensus 63 ~G~~k~ilnFcaNnYLGLss-hPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdANa 141 (417)
T KOG1359|consen 63 KGSDKKILNFCANNYLGLSS-HPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDANA 141 (417)
T ss_pred eccccceeeecccccccccC-ChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEeccccccch
Confidence 35568999999999999994 68999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCC
Q 040324 176 SILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGE 255 (488)
Q Consensus 176 ~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~ 255 (488)
.++-++..|.+.|++|+.+|.++..++++.. .+.|-|+.+++..+.++... +..+|++++++||+|.
T Consensus 142 g~feail~pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k~---------r~klv~TDg~FSMDGd 208 (417)
T KOG1359|consen 142 GAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACKM---------RLKLVVTDGVFSMDGD 208 (417)
T ss_pred HHHHHhcChhhhhhccccccchhhhhhHHHh----hhccchhHHHHHHHHHhhhh---------eEEEEEecceeccCCC
Confidence 9999999999999999999999999999874 66777999999888865432 5668889999999999
Q ss_pred CCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cccEEEeCHHHHHHHHhhC
Q 040324 256 LCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YGGYIAGSKELIQYLKYNC 334 (488)
Q Consensus 256 ~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~Gg~i~~~~~~~~~~~~~~ 334 (488)
+.||++|.+|++|||++|++||+|+-|.+|.||+|..|.+|+. .++|++.+|++|++|+ .|||+.+++++++.+++.+
T Consensus 209 iaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm-~~vdiinsTLgKAlGga~GGyttgp~~li~llrqr~ 287 (417)
T KOG1359|consen 209 IAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVM-GDVDIINSTLGKALGGASGGYTTGPKPLISLLRQRS 287 (417)
T ss_pred cccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCC-CcceehhhhhhhhhcCCCCCCccCChhHHHHHHhcC
Confidence 9999999999999999999999999999999999999999996 7899999999999984 6899999999999999999
Q ss_pred CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHH
Q 040324 335 PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSF 414 (488)
Q Consensus 335 ~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (488)
+++.|+++.+|.....+.++++.++ .......+.+.+.++|++.++..|+.+.+.. .|+.|+++.+...+..+
T Consensus 288 RpylFSnslppavV~~a~ka~dllm------~s~~~i~~~~a~~qrfr~~me~aGftIsg~~-hPI~pv~lGda~lA~~~ 360 (417)
T KOG1359|consen 288 RPYLFSNSLPPAVVGMAAKAYDLLM------VSSKEIQSRQANTQRFREFMEAAGFTISGAS-HPICPVMLGDARLASKM 360 (417)
T ss_pred CceeecCCCChhhhhhhHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHhcCceecCCC-CCccceecccHHHHHHH
Confidence 9999999999988888889998886 4567888999999999999999999997653 69999999999999999
Q ss_pred HHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 415 SRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 415 ~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+++|+++||++..+.||.+|.+..++|+.+|+.||+||||++++++.++.+.++
T Consensus 361 ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 361 ADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred HHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999887654
No 6
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=100.00 E-value=3e-53 Score=395.14 Aligned_cols=400 Identities=26% Similarity=0.411 Sum_probs=351.8
Q ss_pred CcHHHHHHHHHhhhhcccCCCccCCCCceEEEeeccccCCcccccccC-CcceeEEeccccccCCCCCCccchHHHHHHH
Q 040324 50 GLEDFYIRRLYNRVQDCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTN-NVSRCLNLGSYNYLGFAAADEYCTPRVIDSL 128 (488)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~-~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l 128 (488)
++|.||...+...-+|.-.|++ ..++|..+.+.--..+.. ..+++-=+|||+|||++. ||++.+|+.+.+
T Consensus 128 ~Yd~ff~~~i~kKk~DhsYRvF--------k~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~-Hp~V~~A~~~tl 198 (570)
T KOG1360|consen 128 DYDRFFREEIDKKKRDHSYRVF--------KNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSR-HPEVLDAMHDTL 198 (570)
T ss_pred cHHHHHHHHHHhhhccchhHHH--------HHHhHhhhhccchhhccccccCceEEEecCccccccC-ChHHHHHHHHHH
Confidence 5789998888877666544332 233333332221111111 246677789999999996 589999999999
Q ss_pred HHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc--CCCcEEEEeCCCchHHHHHHHhcC
Q 040324 129 KKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM--GKGSLIISDSLNHNSIVNGARGSG 206 (488)
Q Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~--~~~~~Vl~~~~~h~~~~~~~~~~g 206 (488)
+++|.+.++.|+..|.+..+.+||++||++.+++.+++|+|++-||...+..+. -|+++|.+|+.+|.+...+++.++
T Consensus 199 ~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~ 278 (570)
T KOG1360|consen 199 DRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSR 278 (570)
T ss_pred HHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcC
Confidence 999999999999999999999999999999999999999999999976666654 489999999999999999999999
Q ss_pred CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCC
Q 040324 207 ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGK 286 (488)
Q Consensus 207 ~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~ 286 (488)
..-..|+|||+++|+++|++.- +....+|..|.|+||+|.++||++|+++++|||++-++||||+.|.+|+
T Consensus 279 v~K~IFrHND~~hL~~lL~~~~---------~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~ 349 (570)
T KOG1360|consen 279 VPKHIFRHNDLDHLEQLLQSSP---------KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGP 349 (570)
T ss_pred CcceeeccCCHHHHHHHHHhCC---------CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccC
Confidence 9999999999999999998731 2244578889999999999999999999999999999999999999999
Q ss_pred CCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCch
Q 040324 287 TGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCR 366 (488)
Q Consensus 287 ~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~ 366 (488)
.|.|+.|.-|+- +.+||+.+|++|+||..||||+++.+++|.++..+.+++|+++.+|..++.++++++++.. ++
T Consensus 350 rGaGvgerdGvm-~kvDiIsGTLgKafGcVGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~----~e 424 (570)
T KOG1360|consen 350 RGAGVGERDGVM-HKVDIISGTLGKAFGCVGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKS----EE 424 (570)
T ss_pred CCCCccccCCcc-hhhhhcccchhhhcccccceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhh----hh
Confidence 999999998985 6899999999999999999999999999999999999999999999999999999999853 25
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeec
Q 040324 367 GAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICIS 445 (488)
Q Consensus 367 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~ 445 (488)
...+++..+++..++++.|.+.|+++... .+.++|+.+.+.....++++.|+++ ||++..+.||+++.|...+||.|+
T Consensus 425 g~~lR~~hqrnv~~~kq~l~~~GiPVi~~-pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT 503 (570)
T KOG1360|consen 425 GRVLRRQHQRNVKYVKQLLMELGIPVIPN-PSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPT 503 (570)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCcccCC-CcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCC
Confidence 67788888999999999999999999865 5899999999999999999999987 999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCccCC
Q 040324 446 ASHTKEDLIEALEVISRIGDLVGIKYFP 473 (488)
Q Consensus 446 ~~~t~edid~~l~~l~~~~~~~~~~~~~ 473 (488)
..||++.++.+++.+.++.+++++..-.
T Consensus 504 P~HT~~mm~~lv~~l~~vw~~v~l~~~~ 531 (570)
T KOG1360|consen 504 PHHTPQMMNILVNALLDVWNEVGLPRVR 531 (570)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCcccC
Confidence 9999999999999999999999887533
No 7
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2e-51 Score=422.07 Aligned_cols=373 Identities=28% Similarity=0.470 Sum_probs=326.4
Q ss_pred CccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHH
Q 040324 70 PLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHN 149 (488)
Q Consensus 70 ~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (488)
.+.+++|++++ +| |++||||+|++|+++.. ||++.+++.+++++||.++++++..+|+.+.+.
T Consensus 95 ~~~~~~G~~i~-~~---------------G~~~id~~s~~~lgl~~-~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~ 157 (481)
T PLN02822 95 VLESAAGPHTI-IN---------------GKDVVNFASANYLGLIG-NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHL 157 (481)
T ss_pred ceecCCCCeEE-EC---------------CceEEEeECCCcCCCCC-CHHHHHHHHHHHHHhCCCCcccCccccCHHHHH
Confidence 56678888888 67 99999999999999985 689999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHh
Q 040324 150 ELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIA 229 (488)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~ 229 (488)
+|+++||++++.++++++++|+.++..+++++++++|.|+++..+|.++..++.+++++++.++|||+++|+..+++...
T Consensus 158 ~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~ 237 (481)
T PLN02822 158 DCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTA 237 (481)
T ss_pred HHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999998899999999999999999999999999999999999999999999998876422
Q ss_pred cCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccc
Q 040324 230 EGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTF 309 (488)
Q Consensus 230 ~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~ 309 (488)
+.. ..+..+++|++|++++++|.+.||++|+++|++||++||+||+|++|.+|++|+|+++++++.+.++||+++||
T Consensus 238 ~~~---~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~ 314 (481)
T PLN02822 238 ENK---RKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAM 314 (481)
T ss_pred hhc---ccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecc
Confidence 110 00123478889999999999999999999999999999999999999999999999999999766789999999
Q ss_pred ccccCCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-
Q 040324 310 SKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM- 388 (488)
Q Consensus 310 sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 388 (488)
||++|+.||+++++++++++++...++++|+.+.+|..+++++++|+.++ ..+++++++++++++|++.|++.
T Consensus 315 sKalg~~GG~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~------~~~~~~~~l~~~~~~l~~~L~~~~ 388 (481)
T PLN02822 315 GHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLE------DNPSVLAKLKENIALLHKGLSDIP 388 (481)
T ss_pred hhhhhhCCeEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999989999999999999998788888887778999999999998873 23678899999999999999987
Q ss_pred CCeecCCCCCCeEEEEeCCc--------chHHHHHHHHH-HCCceEEeecCCCccC--CCCeEEEeecCCCCHHHHHHHH
Q 040324 389 GFEVLGDNDSPVMPIMVYNP--------AKVSSFSRECL-KQNVAIVTVGFPATPL--LLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~~~~iRi~~~~~~t~edid~~l 457 (488)
|+++..+..++++++.+... ....+++++|+ ++||++.+..||..+. ....+|++++..||++||++++
T Consensus 389 g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~ 468 (481)
T PLN02822 389 GLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKAS 468 (481)
T ss_pred CcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHH
Confidence 88887777889998888542 12467999998 6799999876665432 2357999999999999999999
Q ss_pred HHHHHHHHHhC
Q 040324 458 EVISRIGDLVG 468 (488)
Q Consensus 458 ~~l~~~~~~~~ 468 (488)
++|++++.++.
T Consensus 469 ~~l~~~~~~~~ 479 (481)
T PLN02822 469 ESLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHHh
Confidence 99999988763
No 8
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-52 Score=397.15 Aligned_cols=348 Identities=18% Similarity=0.247 Sum_probs=297.6
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEe-ccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNL-GSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
+++..+.+++|+|+||.+ |++|||| +++....+||+||.+++|+++|+++..+.+ +.+ .
T Consensus 23 ~~~~~~~~G~G~~v~D~~---------------G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~s----n~~-~ 82 (404)
T COG4992 23 RLPVVIVRGEGAYVWDQQ---------------GREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVS----NLF-Y 82 (404)
T ss_pred cCceeEEeccccEEECCC---------------CCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcc----ccc-C
Confidence 455668899999999998 9999999 556888999999999999999999975443 222 4
Q ss_pred hhhHHHHHHHHHHHhC-CCCeEEeCCcHHHHhhhhhc---ccC---CCcEEEEeCCCchHHHHHHHhcCC----------
Q 040324 145 LALHNELEECVARFVG-KPAAIVFGMGYVTNSSILPV---LMG---KGSLIISDSLNHNSIVNGARGSGA---------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sGs~a~~~~~~~---~~~---~~~~Vl~~~~~h~~~~~~~~~~g~---------- 207 (488)
++...+|.+.|++..+ .+.++++|||+|||+++++. +.. +..+|.+.+.+|+.+..++..++-
T Consensus 83 ~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl 162 (404)
T COG4992 83 NEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPL 162 (404)
T ss_pred ChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCC
Confidence 6778999999999997 88999999999999776654 344 558888999999998877666542
Q ss_pred --eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccc
Q 040324 208 --TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSI 281 (488)
Q Consensus 208 --~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~ 281 (488)
.+..+|+||++++++++++ .+++||+|||++.+|.+++ |++++++|++||++||+||||+
T Consensus 163 ~~g~~~vpfnDi~al~~ai~~-------------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt- 228 (404)
T COG4992 163 LPGFRHVPFNDIEALEAAIDE-------------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT- 228 (404)
T ss_pred CCCceecCCCCHHHHHHHhcc-------------CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-
Confidence 3566789999999999986 6899999999999998885 9999999999999999999999
Q ss_pred cccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHH
Q 040324 282 GAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVV 358 (488)
Q Consensus 282 g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i 358 (488)
++||||+. +++++|+.| ||+ |++|++|++- |+++.++.+.+.+....|++||+ +||++|+++.++|+++
T Consensus 229 -G~GRTGk~fA~e~~gV~P---DI~--tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfG--GNpLacAv~~a~l~~l 300 (404)
T COG4992 229 -GLGRTGKLFAYEHYGVEP---DIL--TLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFG--GNPLACAVALAVLEVL 300 (404)
T ss_pred -CCCccchHHHHHHhCCCC---CEE--EeeccccCCccceeeEEchhhhhcCCCCcccCCCC--cCHHHHHHHHHHHHHH
Confidence 99999998 899999999 788 9999998633 88888877788888889998988 9999999999999999
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCCC--CCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCcc
Q 040324 359 IGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGDN--DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATP 434 (488)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 434 (488)
..+++.++.++.+++|+++|+++ .++++... .+.++.+.+..+..+.++++.|.++|+++.+.+
T Consensus 301 -------~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~----- 368 (404)
T COG4992 301 -------LEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAG----- 368 (404)
T ss_pred -------cchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCC-----
Confidence 55789999999999999999987 32233322 357788888776678899999999999998522
Q ss_pred CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 435 LLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 435 ~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
.+++||.||+.+|+||+|+++++++++++....
T Consensus 369 --~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 369 --PNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred --CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 479999999999999999999999999987643
No 9
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-48 Score=385.24 Aligned_cols=354 Identities=18% Similarity=0.242 Sum_probs=288.3
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.++.|+|+||+| ||+||||.|+ +.+++||+||.+++|+++|+++..+... .+.+
T Consensus 37 ~~p~~~~ra~G~~l~Dvd---------------G~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~----~~~~ 97 (447)
T COG0160 37 RFPLVIVRAEGAYLYDVD---------------GNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT----RDLY 97 (447)
T ss_pred cCcceEEecccCEEEeCC---------------CCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccC----Cccc
Confidence 678899999999999999 9999999664 8899999999999999999999754332 2223
Q ss_pred hhhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhh---hcccCCCcEEEEeCCCchHHHHHHHhcCCe----------
Q 040324 145 LALHNELEECVARFVGK---PAAIVFGMGYVTNSSIL---PVLMGKGSLIISDSLNHNSIVNGARGSGAT---------- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~---~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~---------- 208 (488)
.+...++.++|.+.++. .++++.+||++||+.++ +..+++..+|.+...+|+.+..++.+++..
T Consensus 98 ~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~ 177 (447)
T COG0160 98 YEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPL 177 (447)
T ss_pred chhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCC
Confidence 46778899999998875 46899999999996654 556899999999999999999998887532
Q ss_pred ---EEEeeCC----C-------------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHH
Q 040324 209 ---IRVFQHN----T-------------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIIT 264 (488)
Q Consensus 209 ---v~~~~~~----d-------------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~ 264 (488)
+..+|+. + .+.+++.+.+.. .++...+++|+|+|++.+|.+.+ |+++++
T Consensus 178 ~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~-------~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~ 250 (447)
T COG0160 178 PPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLE-------VGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRK 250 (447)
T ss_pred CCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhc-------CCCCceeEEEEecccCCCCCcCCCHHHHHHHHH
Confidence 3333322 1 222333333221 22468999999999999999885 999999
Q ss_pred HHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHHHHhhCCCCcccC
Q 040324 265 ICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQYLKYNCPAHLYAT 341 (488)
Q Consensus 265 l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~~~~~~~~~~~~~ 341 (488)
+|+|||++||+||||+ +|||||++ ++|++|+.| ||+ |++|++|+ +.|++++++++++ .....+.++|+
T Consensus 251 ~~~~~gillI~DEVQt--G~GRTG~~fa~E~~gv~P---Div--t~aK~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf~- 321 (447)
T COG0160 251 LCREHGILLIADEVQT--GFGRTGKMFAFEHFGVEP---DIV--TLAKSLGGGLPLSAVVGRAEIMD-WPPGGHGGTFG- 321 (447)
T ss_pred HHHHcCCEEEEecccc--CCCccccchhhhhcCCCC---CEE--EecccccCCCceeEEeccHHhcc-cCCcccCCCCC-
Confidence 9999999999999999 99999998 889999988 788 99999987 2299999999999 66667776766
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCCCCC--CeEEEEeCCc--------c
Q 040324 342 SISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGDNDS--PVMPIMVYNP--------A 409 (488)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~--~~~~~~~~~~--------~ 409 (488)
+||++|++++++|++| +.+++.++.++.+++++++|.++ .++.+++..+ .++.+.+..+ .
T Consensus 322 -GNpva~Aaa~AvL~vi-------e~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~ 393 (447)
T COG0160 322 -GNPVACAAALAVLDVI-------EEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAE 393 (447)
T ss_pred -cCHHHHHHHHHHHHHH-------HHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHH
Confidence 9999999999999998 45689999999999999999876 3444555444 6777776532 3
Q ss_pred hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 410 KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
....++++|+++|+++...| +. .+++||.||+.+|+|++|.++++|+++++++
T Consensus 394 ~~~~i~~~~~~~Glil~~~G----~~-~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 394 LAAKIVARAFERGLLLLTCG----PH-GNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHcCCEEeccC----CC-CcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 56689999999999888433 22 4899999999999999999999999998764
No 10
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1.5e-47 Score=389.08 Aligned_cols=353 Identities=31% Similarity=0.522 Sum_probs=305.0
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
|+++|||+||+|||+.+ ||++.+|+.+++++++.+.++++...+..+.+.+|++++|+++|.+++++++||++||..++
T Consensus 44 ~~~~~~~~sn~ylgl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQ-HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAAL 122 (406)
T ss_pred CccEEEeecccccCCCC-CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 58999999999999986 58999999999999998888888877888889999999999999999999999999998888
Q ss_pred hcccC--CCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 179 PVLMG--KGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 179 ~~~~~--~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
..+.. +++.|+++..+|+++..+++..++++..++++|++++++.++... +.+..+|+++++++++|.+
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~---------~~~~~~v~~~~v~~~~G~~ 193 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHNDPADLERKLSDLD---------PHRPKLVAFESVYSMDGDI 193 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHhcc---------CCCCEEEEEcCCCCCCCch
Confidence 86654 788999999999999999999999998999999999998886421 1245688899999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCC
Q 040324 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPA 336 (488)
Q Consensus 257 ~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~ 336 (488)
.|+++|.++|++||+++|+||+|+.|.+|++|.+..++.++. +++||+++||||++|..|||+++++++++.+......
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~GG~~~~~~~~~~~l~~~~~~ 272 (406)
T PRK13393 194 APIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMGGYITGSAALCDFIRSFASG 272 (406)
T ss_pred hCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccCceeeCCHHHHHHHHHhCcC
Confidence 999999999999999999999999999999998876777775 3468999999999999899999999999999877766
Q ss_pred CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHH
Q 040324 337 HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSR 416 (488)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (488)
+.++.+.+|..++++.++|+.+.. . ...+++++++.+++++.|++.|+++.. ..++++++.+.++....++.+
T Consensus 273 ~~~t~~~~p~~~aa~~aaL~~~~~-----~-~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~i~~v~~~~~~~~~~l~~ 345 (406)
T PRK13393 273 FIFTTSLPPAVAAGALASVRHLKA-----S-SAERERHQDRVARLRARLDKAGIPHLP-NPSHIVPVMVGDPVLCKQISD 345 (406)
T ss_pred ceecCccCHHHHHHHHHHHHHHhh-----C-HHHHHHHHHHHHHHHHHHHHcCCCcCC-CCCCeEEEEeCCHHHHHHHHH
Confidence 666667899999999999998742 1 233567788999999999998887653 457788887655445678999
Q ss_pred HHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 417 ECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 417 ~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
.|+++ ||.+.+..+|..|.+.+++||+|++.+|++|+|+++++|++++++++.
T Consensus 346 ~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~~~ 399 (406)
T PRK13393 346 ELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARLGL 399 (406)
T ss_pred HHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhcCc
Confidence 99985 999999888888877789999999999999999999999999887654
No 11
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=2e-47 Score=388.00 Aligned_cols=353 Identities=31% Similarity=0.527 Sum_probs=306.0
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
|++++||+||||||++. ||++.+|+.+++++++.+.++++..+|+.+.+.+|++++|+++|.+++++++||++||..++
T Consensus 44 ~~~~~~~~sn~ylgl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai 122 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQ-HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATL 122 (402)
T ss_pred CeeEEEeEccCcCCCCC-CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHH
Confidence 68999999999999996 58999999999999998888888888888999999999999999989999999999998888
Q ss_pred hcccC--CCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 179 PVLMG--KGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 179 ~~~~~--~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
..+.. +++.|+.+..+|+++..+++..|.++..++++|+++++++++.. . +....+|+++++++++|.+
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~-~--------~~~~~~v~~e~~~~~~G~~ 193 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHNDVAHLEKLLQSV-D--------PNRPKIIAFESVYSMDGDI 193 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCCCHHHHHHHHHhc-c--------CCCCeEEEEcCCCCCCCCc
Confidence 77654 78899999889999999999999988889999999999988742 0 1234688899999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCC
Q 040324 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPA 336 (488)
Q Consensus 257 ~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~ 336 (488)
.|+++|+++|++||++||+||+|+.|.+|++|.+..++.++. +++|++++||||++|..|||+++++++++.++....+
T Consensus 194 ~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~i~~~~~~~~~l~~~~~~ 272 (402)
T TIGR01821 194 APIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLM-HRIDIIEGTLAKAFGVVGGYIAASRKLIDAIRSYAPG 272 (402)
T ss_pred cCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCC-CCCeEEEEechhhhccCCceeecCHHHHHHHHHhCcC
Confidence 999999999999999999999999988999888866666764 3468999999999999899999999999999876666
Q ss_pred CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHH
Q 040324 337 HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSR 416 (488)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (488)
+.++++.+|..+++++++|+.+.. .+.+.++++++.+++++.|+++|+++..+ .++++++.+.......++.+
T Consensus 273 ~~~t~~~~~~~~aaa~aaL~~~~~------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~i~~i~~~~~~~a~~~~~ 345 (402)
T TIGR01821 273 FIFTTSLPPAIAAGATASIRHLKE------SQDLRRAHQENVKRLKNLLEALGIPVIPN-PSHIVPVIIGDAALCKKVSD 345 (402)
T ss_pred ceecCcCCHHHHHHHHHHHHHhhc------CHHHHHHHHHHHHHHHHHHHHcCCCcCCC-CCCEEEEEeCCHHHHHHHHH
Confidence 667777999999999999998742 24566777899999999999999876644 56788887655445678999
Q ss_pred HHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 417 ECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 417 ~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
.|+++ ||.+.+..+|..+.+.+++||++++.+|++|+|+++++|++++++++.
T Consensus 346 ~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~ 399 (402)
T TIGR01821 346 LLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLGL 399 (402)
T ss_pred HHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 98865 999999888888877789999999999999999999999999988765
No 12
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=1.2e-46 Score=383.15 Aligned_cols=355 Identities=31% Similarity=0.534 Sum_probs=305.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
|++++||+||||||++. ||.+.+++.+++++++.+.++++..+|+.+.+.+|+++||++++.++++++++|+++|..++
T Consensus 45 ~~~~~~~~s~dylgl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai 123 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQ-HPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATL 123 (407)
T ss_pred CceEEEEECCCCcCCCC-CHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHH
Confidence 68999999999999996 58999999999999988887888887888999999999999999989999999999998877
Q ss_pred hcccC--CCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 179 PVLMG--KGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 179 ~~~~~--~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
..+.. ++++|+.+...|.+...+++..+.++..++++|+++|+++++.. . +.+..+|+++++++++|.+
T Consensus 124 ~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~--------~~~~~~v~~~~v~s~~G~~ 194 (407)
T PRK09064 124 STLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHNDVAHLEELLAAA-D--------PDRPKLIAFESVYSMDGDI 194 (407)
T ss_pred HHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCCCHHHHHHHHHhc-c--------CCCCeEEEEeCCCCCCccc
Confidence 76654 78889999999999999999999998899999999999988742 1 1134588889999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCC
Q 040324 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPA 336 (488)
Q Consensus 257 ~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~ 336 (488)
.|+++|+++|++||++||+||+|+.|.+|++|.+..++.++. +++|++++||||++|..|||+++++++++.+.....+
T Consensus 195 ~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~GG~~~~~~~~~~~l~~~~~~ 273 (407)
T PRK09064 195 APIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMGGYIAGSAALVDAVRSYAPG 273 (407)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccCceEecCHHHHHHHHHhCcc
Confidence 999999999999999999999999888899998877777764 4568999999999999899999999999998876666
Q ss_pred CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHH
Q 040324 337 HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSR 416 (488)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (488)
+.++++.+|..+++++++|+.+.. ....+++++++.+++++.|+++|+++..+ .++++++.+.......++.+
T Consensus 274 ~~~t~~~~~~~~~aa~~al~~~~~------~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~iv~i~~~~~~~~~~l~~ 346 (407)
T PRK09064 274 FIFTTSLPPAIAAAALASIRHLKE------SNEERERHQERAAKLKAALDAAGIPVMPN-ESHIVPVMVGDPEKCKKASD 346 (407)
T ss_pred ccccCcCCHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHcCCCCCCC-CCCEEEEEeCCHHHHHHHHH
Confidence 666667889899999999998842 23456889999999999999999877643 46788887765455678999
Q ss_pred HHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 040324 417 ECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKY 471 (488)
Q Consensus 417 ~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (488)
+|+++ ||.+.+..+|..+.+.+++||++++.+|++|+++++++|++++++++.++
T Consensus 347 ~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~~~~ 402 (407)
T PRK09064 347 MLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLGLPR 402 (407)
T ss_pred HHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 99865 99999888887777778999999999999999999999999998887654
No 13
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=9.4e-47 Score=379.48 Aligned_cols=362 Identities=27% Similarity=0.437 Sum_probs=306.0
Q ss_pred EEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc
Q 040324 103 LNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM 182 (488)
Q Consensus 103 ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~ 182 (488)
|||+||+|||++. ||++.+++.+++++||.++++++..+|....+.+||+++|++++.++++++++|+.|+..++.++.
T Consensus 1 ~~f~s~dyLgl~~-~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~ 79 (392)
T PLN03227 1 LNFATHDFLSTSS-SPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFA 79 (392)
T ss_pred CCCcCcCccCCCC-CHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhC
Confidence 6899999999995 589999999999999999999999999999999999999999999999999999999988888899
Q ss_pred CCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCC-CCCCCCCceEEEEEcCcCCCCCCCCChHH
Q 040324 183 GKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQ-PRTRRPWKKIMVVVEGIYSMEGELCKLPE 261 (488)
Q Consensus 183 ~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~-p~~~~~~~~~~vi~e~v~s~~G~~~~l~~ 261 (488)
++||.|+++...|+++..++.+.+.++..++++|++++++.++....+.. .+.....++.+|++|++++++|.+.|+++
T Consensus 80 ~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~ 159 (392)
T PLN03227 80 KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKE 159 (392)
T ss_pred CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHH
Confidence 99999999999999999999999999999999999999887765321100 00000124568889999999999999999
Q ss_pred HHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCCCccc
Q 040324 262 IITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYA 340 (488)
Q Consensus 262 l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~~~ 340 (488)
++++|++||+++|+||+|++|.+|++|+++++++|+.| .++||++.|++|++|..||++++++++++.++...++++|+
T Consensus 160 i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~gg~v~~~~~~~~~~~~~~~~~~~~ 239 (392)
T PLN03227 160 LVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVGGMTVGSEEVVDHQRLSGSGYCFS 239 (392)
T ss_pred HHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccCcEEecCHHHHHHHHHhCcCcccc
Confidence 99999999999999999999999999999999999976 67899999999999988899999999998887767777888
Q ss_pred CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee----------cCCCCCCeEEEEeCCcch
Q 040324 341 TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEV----------LGDNDSPVMPIMVYNPAK 410 (488)
Q Consensus 341 ~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~----------~~~~~~~~~~~~~~~~~~ 410 (488)
.+.+|..+++++++++.+. ..+++++++++++++|+++|++.+++. .....++++++.+.+...
T Consensus 240 ~~~~p~~~~aa~~al~~~~------~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~ 313 (392)
T PLN03227 240 ASAPPFLAKADATATAGEL------AGPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEA 313 (392)
T ss_pred CCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHH
Confidence 7777888888888876642 346789999999999999998765432 123357889998865322
Q ss_pred ---------HHHHHHHHHHCCceEEeec------CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCC
Q 040324 411 ---------VSSFSRECLKQNVAIVTVG------FPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYFP 473 (488)
Q Consensus 411 ---------~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~ 473 (488)
..+++++|+++|+++.+.+ ++..| ...+|++++..||+||||+++++|+++++++..||-.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P--~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~~~~~~ 389 (392)
T PLN03227 314 TRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVP--PPCLRVVANASHTREDIDKLLTVLGEAVEAILCKIID 389 (392)
T ss_pred hhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCC--CceEEEEecCCCCHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 2489999999999997533 34444 3689999999999999999999999999998777644
No 14
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=6.9e-45 Score=370.19 Aligned_cols=353 Identities=30% Similarity=0.519 Sum_probs=301.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
|+++++|+||+|++++. ||.+.+++.+++++++.+.++++..+|..+.+.+|++++|+++|.+++++++||++||..++
T Consensus 45 ~~~~~~~~sn~yl~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i 123 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQ-HPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAAL 123 (410)
T ss_pred CceEEEEECCCccCCCC-CHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHH
Confidence 68999999999999995 58999999999999998888888888887788999999999999999999999999997777
Q ss_pred hccc--CCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 179 PVLM--GKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 179 ~~~~--~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
..+. .+++.|+++..+|+++..+++..|+++..++++|.+++++.++.... .++.+|+++++++++|.+
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~---------~~t~~v~i~~~~n~tG~~ 194 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHNDLADLEEQLASVDP---------DRPKLIAFESVYSMDGDI 194 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhccC---------CCCEEEEEeCCCCCCccc
Confidence 7554 37899999999999999899999999988999999999888875311 144578889999999999
Q ss_pred CChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCC
Q 040324 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPA 336 (488)
Q Consensus 257 ~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~ 336 (488)
.++++|+++|++||+++|+||+|+.|.+|++|.+..++.++. +++|++++||||++|.+|||+++++++++.++....+
T Consensus 195 ~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~~div~~tlsK~~g~~GG~~~~~~~~~~~l~~~~~~ 273 (410)
T PRK13392 195 APIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLM-DRIDMIQGTLAKAFGCLGGYIAASADLIDFVRSFAPG 273 (410)
T ss_pred ccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCC-CCCcEEEEEChHhhhcccchhhcCHHHHHHHHHhCcc
Confidence 999999999999999999999999888888888766655653 4568999999999999999999999999988877766
Q ss_pred CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHH
Q 040324 337 HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSR 416 (488)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (488)
+.++.+.+|+.++++.++|+.+. ......++++++.+++++.|++.|+++.. ..++++++.+..+....++++
T Consensus 274 ~~~s~~~~~~~~~a~~aaL~~~~------~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~i~~~~~~~~~~~~~ 346 (410)
T PRK13392 274 FIFTTALPPAVAAGATAAIRHLK------TSQTERDAHQDRVAALKAKLNANGIPVMP-SPSHIVPVMVGDPTLCKAISD 346 (410)
T ss_pred hhccCcCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCCEEEEEeCCHHHHHHHHH
Confidence 66777788888899999998764 22345678899999999999999987753 456777777765445678999
Q ss_pred HHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 417 ECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 417 ~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
+|+ ++||.+.+..+|..+.+..++|+++++.+|++|+|+++++|+++.++++.
T Consensus 347 ~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~~ 400 (410)
T PRK13392 347 RLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRLEL 400 (410)
T ss_pred HHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 997 56999998888877777789999999999999999999999999888765
No 15
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=2e-43 Score=358.10 Aligned_cols=373 Identities=31% Similarity=0.536 Sum_probs=314.7
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
+.++++.+++|..+++.+ |+++|||++++|+|++. +|++.+++.+++++++.++++++...|..
T Consensus 19 ~~~~~~~~~~~~~~~~~~---------------g~~~i~~~~~~~lg~~~-~~~v~~~~~~~~~~~~~~~~~s~~~~G~~ 82 (393)
T TIGR01822 19 KSERIITSPQGADIRVAD---------------GREVLNFCANNYLGLSS-HPDLIQAAKDALDEHGFGMSSVRFICGTQ 82 (393)
T ss_pred CcccccccCCCceEEecC---------------CceEEEeeCCCccccCC-CHHHHHHHHHHHHHhCCCCCCcCcccCCh
Confidence 557788999999999877 99999999999999995 58999999999999888888888888888
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHH
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~ 225 (488)
+.+.++++.+|+++|.++++++++|++|+..++.++.++||.|+++.++|+++..++++.+.+...+.++|+++|++.++
T Consensus 83 ~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~ 162 (393)
T TIGR01822 83 DIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLK 162 (393)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHH
Confidence 88899999999999999999999999999888888899999999999999999999999888888888999999999998
Q ss_pred HHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEE
Q 040324 226 EQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIM 305 (488)
Q Consensus 226 ~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~ 305 (488)
+.... ..++.+|+++++++++|.+.++++|+++|++||++||+||+|+.|.++.+|.+..+..++. +++|++
T Consensus 163 ~~~~~-------~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~ 234 (393)
T TIGR01822 163 EARAA-------GARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDII 234 (393)
T ss_pred hhhhc-------CCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEE
Confidence 64221 0135678889999999999999999999999999999999998888888877766666665 357999
Q ss_pred EcccccccCC-cccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH
Q 040324 306 MGTFSKSFGS-YGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSK 384 (488)
Q Consensus 306 ~~t~sK~~g~-~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ 384 (488)
++|+||++++ .|||+++++++++.+......+.++.+.++..+++++++++.+. ..++..++++++.+++++.
T Consensus 235 ~~s~sK~l~g~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~l~~~ 308 (393)
T TIGR01822 235 TGTLGKALGGASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE------ASNELRDRLWANTRYFRER 308 (393)
T ss_pred EEEChHHhhCCCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHH
Confidence 9999999975 45999999999999877555555665567777777888888763 2456788999999999999
Q ss_pred HHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 385 LQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 385 L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
|++.|+++..+ .++++++.+.......++++.|+++||.+....||..+.+..++|++++..+|++||++++++|+++.
T Consensus 309 L~~~g~~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 309 MEAAGFDIKPA-DHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred HHHcCCCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 99888876533 45677776655455678999999999999866666555556789999999999999999999999998
Q ss_pred HHhCC
Q 040324 465 DLVGI 469 (488)
Q Consensus 465 ~~~~~ 469 (488)
++++.
T Consensus 388 ~~~~~ 392 (393)
T TIGR01822 388 RELGV 392 (393)
T ss_pred HHhCC
Confidence 87753
No 16
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-43 Score=358.06 Aligned_cols=353 Identities=23% Similarity=0.391 Sum_probs=298.9
Q ss_pred CcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhh
Q 040324 98 NVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSI 177 (488)
Q Consensus 98 ~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~ 177 (488)
.|+.++||+||+|||+.+ ||++.+++.+++++++.+...++...+..+...+|+++||+++|.++++++++|++||..+
T Consensus 52 ~g~~~~~~~~~~YL~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~ 130 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSG-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVGL 130 (407)
T ss_pred CCCcEEEeecCCccCCCC-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHH
Confidence 378899999999999995 6899999999999987655434444444567899999999999999999999999999999
Q ss_pred hhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC
Q 040324 178 LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC 257 (488)
Q Consensus 178 ~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~ 257 (488)
++++..+++.|+++...|.+...+++..|.++..++++|+++|++.+++. .+++|+++++++++|.+.
T Consensus 131 l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~------------~~~lV~v~~v~n~tG~i~ 198 (407)
T PRK07179 131 LQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERH------------GPGIIVVDSVYSTTGTIA 198 (407)
T ss_pred HHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhc------------CCeEEEECCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999988641 356788899999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCCC
Q 040324 258 KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAH 337 (488)
Q Consensus 258 ~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~ 337 (488)
|+++|+++|++||++||+||+|++|.+|++|.+....+++. ..+|+++.|++|++|+.+|++++++++++.+.......
T Consensus 199 pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~~G~l~~~~~~~~~~~~~~~~~ 277 (407)
T PRK07179 199 PLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGRAGIITCPRELAEYVPFVSYPA 277 (407)
T ss_pred cHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhccCeEEEeCHHHHHHHHHhCcCe
Confidence 99999999999999999999999888899988866667764 45789999999999987799999999988887655444
Q ss_pred cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHH
Q 040324 338 LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRE 417 (488)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (488)
.++.+.++..++++.++++.+. ...+.+++++++.++|++.|+++|+++.. .++++++.+........+.+.
T Consensus 278 ~~~~t~~~~~~aa~~aal~~~~------~~~~~~~~l~~~~~~l~~~L~~~g~~v~~--~~~i~~l~~~~~~~~~~~~~~ 349 (407)
T PRK07179 278 IFSSTLLPHEIAGLEATLEVIE------SADDRRARLHANARFLREGLSELGYNIRS--ESQIIALETGSERNTEVLRDA 349 (407)
T ss_pred eeCCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHHcCCCCCC--CCCEEEEEeCCHHHHHHHHHH
Confidence 5565667777777778888773 33567889999999999999999887663 467888876554456678889
Q ss_pred HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccC
Q 040324 418 CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYF 472 (488)
Q Consensus 418 l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~ 472 (488)
|.++||.+..+.+|..+.+.+.+||+++..+|++|+++++++|++++++.++.+.
T Consensus 350 L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~~~~~ 404 (407)
T PRK07179 350 LEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEVDLWFW 404 (407)
T ss_pred HHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCcC
Confidence 9999999776666776666789999999999999999999999999999887654
No 17
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=3.2e-44 Score=362.76 Aligned_cols=346 Identities=18% Similarity=0.193 Sum_probs=279.4
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||.|+ ....+||+||++.+|+.+|+++...... ...
T Consensus 16 ~~~~~~~~~~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-----~~~ 75 (397)
T TIGR03246 16 PAPFIPVRGEGSRVWDQQ---------------GKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN-----GYT 75 (397)
T ss_pred CCCceEEEeecCEEEeCC---------------CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC-----ccC
Confidence 567788999999999999 9999999663 3345666789999999999988422111 124
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCC--------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGA-------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (488)
++.+.+|+++|+++.+.+++++++||++||+.+++.+ .++.++|.++..+|+++..++..++.
T Consensus 76 ~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~ 155 (397)
T TIGR03246 76 NEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFA 155 (397)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCC
Confidence 5667899999999998889999999999998877765 36778888999999998877776542
Q ss_pred ----eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEccc
Q 040324 208 ----TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLDEAH 279 (488)
Q Consensus 208 ----~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~~ 279 (488)
.+..+++||++++++.+.+ +.++||+||+++++|.+. +|++|+++|++||+++|+||+|
T Consensus 156 ~~~~~~~~~~~~d~~~l~~~l~~-------------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~ 222 (397)
T TIGR03246 156 PLPGGIKHAPYNDLAAAKALISD-------------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ 222 (397)
T ss_pred CCCCceEEeCCCCHHHHHHHhcc-------------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 3457889999999988853 578999999999999764 4999999999999999999999
Q ss_pred cccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHH
Q 040324 280 SIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQ 356 (488)
Q Consensus 280 s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (488)
+ ++|++|.+ ..+++++.| |++ |++|++|++ .|++++++++++.+....++++|+ ++|+.+++++++|+
T Consensus 223 t--G~Gr~G~~~a~~~~gv~p---Di~--t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~--~~p~~~aaa~a~l~ 293 (397)
T TIGR03246 223 T--GVGRTGELYAYMHYGVTP---DIL--TSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYG--GNPLACAVAGKVLD 293 (397)
T ss_pred h--cCCccccchhhhhcCCCC---CEE--EeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCC--CCHHHHHHHHHHHH
Confidence 8 89999998 667889887 777 999999742 288889999999887655655665 89999999999999
Q ss_pred HHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeecC--CCCCCeEEEEeCCc--chHHHHHHHHHHCCceEEeecC
Q 040324 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEVLG--DNDSPVMPIMVYNP--AKVSSFSRECLKQNVAIVTVGF 430 (488)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~ 430 (488)
++. .+++.+++++++++|+++|++++ +.+.. ...+.++.+.+... .....+++.|+++|+++.+.+
T Consensus 294 ~~~-------~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g- 365 (397)
T TIGR03246 294 LVN-------TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAG- 365 (397)
T ss_pred HHh-------hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeecC-
Confidence 873 35688999999999999998874 22221 22346666666442 356789999999999998522
Q ss_pred CCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 431 PATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 431 ~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.+++|++||+.+|++|||+++++|+++++++
T Consensus 366 ------~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 366 ------PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3689999999999999999999999988753
No 18
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-44 Score=353.74 Aligned_cols=349 Identities=18% Similarity=0.232 Sum_probs=279.0
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
+++|.+++|.|++|.| ||+|||..|. ...++||++|++.+|+.+|+++...... ...+..
T Consensus 27 ~~~i~~aeG~yl~d~~---------------G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~----~~~t~~ 87 (449)
T COG0161 27 PRVIVRAEGVYLTDID---------------GRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF----GGFTHE 87 (449)
T ss_pred ceeeeecceeEEEeCC---------------CCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh----cccCCc
Confidence 7899999999999999 9999998554 5568899999999999999999865432 222344
Q ss_pred hHHHHHHHHHHHhC---CCCeEEeCCcHHHHhhhhhccc---------CCCcEEEEeCCCchHHHHHHHhcCCe------
Q 040324 147 LHNELEECVARFVG---KPAAIVFGMGYVTNSSILPVLM---------GKGSLIISDSLNHNSIVNGARGSGAT------ 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g---~~~~i~~~sGs~a~~~~~~~~~---------~~~~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (488)
...+|.++|+++.+ .+++++.+|||+|++.+++... ++...|.....||+.+..++...|..
T Consensus 88 Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~ 167 (449)
T COG0161 88 PAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAF 167 (449)
T ss_pred hHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhh
Confidence 48999999999998 4689999999999988777642 23346777889999999888777621
Q ss_pred -------EEEe--eC----C-----C------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC-CCCCCC----h
Q 040324 209 -------IRVF--QH----N-----T------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM-EGELCK----L 259 (488)
Q Consensus 209 -------v~~~--~~----~-----d------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~-~G~~~~----l 259 (488)
+..+ |+ + + .++||++|.+ ++|.++++||+||+... +|.+.| |
T Consensus 168 ~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~---------~g~~~IAAfI~EPv~g~agG~~~pp~~Yl 238 (449)
T COG0161 168 YDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE---------HGPETIAAFIVEPVVGGAGGMLVPPPGYL 238 (449)
T ss_pred ccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh---------cCcccEEEEEecccccccCCcccCChHHH
Confidence 1111 11 1 1 4456666655 45679999999999988 787775 9
Q ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhh--
Q 040324 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYN-- 333 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~-- 333 (488)
++++++|++||++||+|||-+ +|||||.. +++++|+.| ||+ |++|+++++- |+++.++++.+.+...
T Consensus 239 ~~vr~iC~ky~ILlI~DEV~t--GFGRTG~~FA~e~~gi~P---Di~--~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~ 311 (449)
T COG0161 239 KRVREICDKYGILLIADEVAT--GFGRTGKMFACEHAGIVP---DIL--CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDA 311 (449)
T ss_pred HHHHHHHHHcCcEEEeeccee--CCCcCchhhhhhhcCCCC---Cee--eecccccccchhhHhHhhhHHHHHHHhcccC
Confidence 999999999999999999999 99999999 899999999 788 9999997533 7788899999888764
Q ss_pred ---CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeecCCCC--CCeEEEEeC
Q 040324 334 ---CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK-M-GFEVLGDND--SPVMPIMVY 406 (488)
Q Consensus 334 ---~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~--~~~~~~~~~ 406 (488)
.|++||+ +||++||+++++|+++ +.++++++.++.+.+|.++|++ + +.+.+++.. +.+..+.+.
T Consensus 312 ~~f~HG~TYs--ghPlacAaAla~L~i~-------e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv 382 (449)
T COG0161 312 GAFMHGHTYS--GNPLACAAALANLDIL-------EEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELV 382 (449)
T ss_pred CeeccCCccc--cCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEe
Confidence 4666666 9999999999999999 5578999999999999999997 2 333444332 345555554
Q ss_pred Ccch---------HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 407 NPAK---------VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 407 ~~~~---------~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.+.. ...+.+.++++|++++|.+ +.+-++||+.+|++|||++++++.+++++..
T Consensus 383 ~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g--------~~i~~~PPliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 383 ADKATKTPFEARVGARVRAAALERGLLIRPLG--------DVIYLMPPLIITREEIDELVDALREALDETL 445 (449)
T ss_pred cccccccchhhhHHHHHHHHHHHCCeEEeecC--------CEEEEcCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 3332 4578889999999999642 5899999999999999999999999998764
No 19
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=3.3e-44 Score=368.71 Aligned_cols=356 Identities=14% Similarity=0.175 Sum_probs=274.2
Q ss_pred cccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC
Q 040324 65 DCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 65 ~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (488)
+.+|..+.+++|+|+||.| |++||||.+ .....+||+||++++|+++|++++..... ...+
T Consensus 69 ~~~p~~i~~~~G~~l~D~d---------------G~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~---~~~~ 130 (504)
T PLN02760 69 DLEPLVIEKSEGSYVYDIN---------------GKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHS---FWNR 130 (504)
T ss_pred cCCCceEEeeeeeEEEECC---------------CCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceec---cccc
Confidence 4567788999999999999 999999965 34567778899999999999999654321 1124
Q ss_pred ChhhHHHHHHHHHHHhC-C--CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCeE--
Q 040324 144 TLALHNELEECVARFVG-K--PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGATI-- 209 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g-~--~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~v-- 209 (488)
.++...+|+++|++.+. . +.++|++||++||+.+++.. .++.++|.++..+|+++..++.++|...
T Consensus 131 ~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~ 210 (504)
T PLN02760 131 TTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALH 210 (504)
T ss_pred CcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhc
Confidence 56778899999998853 3 46889999999998777654 2356788889999999988877665321
Q ss_pred ----------EEeeCC----------C--------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---
Q 040324 210 ----------RVFQHN----------T--------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK--- 258 (488)
Q Consensus 210 ----------~~~~~~----------d--------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~--- 258 (488)
..++.+ + .++|++++.+. .+...++||+|||++++|.+.|
T Consensus 211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---------~~~~iAAvI~EPv~g~gG~~~p~~~ 281 (504)
T PLN02760 211 QKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE---------GPETIAAFIAEPVMGAGGVIPPPAT 281 (504)
T ss_pred cCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc---------CCCceEEEEECCccCCCCCcCCCHH
Confidence 111110 1 13455555421 1236899999999999999887
Q ss_pred -hHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh
Q 040324 259 -LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN 333 (488)
Q Consensus 259 -l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~ 333 (488)
+++|+++|++||++||+||||+ +|||+|.+ .++++|+.| ||+ ||+|++|++ .|++++++++++.+...
T Consensus 282 yl~~lr~lc~~~g~lLI~DEV~T--GfGRtG~~~a~e~~gv~P---Div--tlgK~lggG~~PigAv~~~~~i~d~~~~~ 354 (504)
T PLN02760 282 YFEKIQAVLKKYDILFIADEVIC--AFGRLGTMFGCDKYNIKP---DLV--SLAKALSSAYMPIGAVLVSPEISDVIHSQ 354 (504)
T ss_pred HHHHHHHHHHHcCCEEEecchhh--CCcccchhhHHHhcCCCC---cEE--EecccccCCccccceEeecHHHHhhhhcc
Confidence 9999999999999999999999 99999988 788999998 776 999999763 48899999999988642
Q ss_pred -------CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecC--CCCCCeEEE
Q 040324 334 -------CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLG--DNDSPVMPI 403 (488)
Q Consensus 334 -------~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~ 403 (488)
.+++||+ +||++|++++++|++++ .+++.+++++++++|+++|+++ ..+++. ...+.++.+
T Consensus 355 ~~~~~~~~h~~T~~--gnPl~~Aaala~Le~i~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gi 425 (504)
T PLN02760 355 SNKLGSFAHGFTYS--GHPVSCAVALEALKIYK-------ERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGT 425 (504)
T ss_pred cccccCcccCCCCC--CCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEE
Confidence 3555665 89999999999999994 3468999999999999999876 112111 122456666
Q ss_pred EeCCcc-----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 040324 404 MVYNPA-----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKY 471 (488)
Q Consensus 404 ~~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (488)
.+.+.. ....+.+.|+++||++.+. .+.+||+||+.+|++|||+++++++++++++..+.
T Consensus 426 e~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--------g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~~~~ 496 (504)
T PLN02760 426 EFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA--------GDNIMMSPPLIITPEEVDELISIYGKALKATEERV 496 (504)
T ss_pred EEecCCcccccccchhHHHHHHHHHHHhCCcEEEec--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 664321 1456888999999998741 15799999999999999999999999998875443
No 20
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-43 Score=355.99 Aligned_cols=374 Identities=22% Similarity=0.356 Sum_probs=286.6
Q ss_pred HHHHHHHhhhhcccCCCc---------cCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHH
Q 040324 54 FYIRRLYNRVQDCFGRPL---------SSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRV 124 (488)
Q Consensus 54 ~~~~~~~~~~~~~~~~~i---------~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~ 124 (488)
.+.++.|+|..+||.+|+ .+++|+++||.| |++||||+|++++|+ |+||++.+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~---------------g~~~ld~~s~~~lgl-~~~p~v~~A~ 69 (402)
T PRK07505 6 RNNKKRINRAEKFWDAAYDEGLNGLTVGEREGILITLAD---------------GHTFVNFVSCSYLGL-DTHPAIIEGA 69 (402)
T ss_pred HHHHHHHHhhHHHHHHHHhcccccceeeccCCccEEecC---------------CceEEEeecCCccCC-CCCHHHHHHH
Confidence 456667777777766554 677899999999 999999999999998 7889999999
Q ss_pred HHHHHHcC-CCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc------CCCcEEEEeCCCchH
Q 040324 125 IDSLKKYS-HSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM------GKGSLIISDSLNHNS 197 (488)
Q Consensus 125 ~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~------~~~~~Vl~~~~~h~~ 197 (488)
.+++++++ .++++++.. ...+.+.+++++|+++++. ++++++||++|+..+++.+. +++++|..+..+|++
T Consensus 70 ~~~l~~~g~~~~~~~~~~-~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s 147 (402)
T PRK07505 70 VDALKRTGSLHLSSSRTR-VRSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHAS 147 (402)
T ss_pred HHHHHHhCCCCCCccchh-hhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHh
Confidence 99999986 344333322 2467789999999999998 89999999999976665432 355678888899998
Q ss_pred HHH--HHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 040324 198 IVN--GARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYL 275 (488)
Q Consensus 198 ~~~--~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~ 275 (488)
+.. .....+..++.++++|+++|++++.+ .++++++++|++++ |.+.++++|+++|++||++||+
T Consensus 148 ~~~~~~~~~~~~~v~~~~~~d~~~l~~~~~~------------~~~~~vl~~p~~~~-G~~~~~~~i~~l~~~~~~~li~ 214 (402)
T PRK07505 148 LNILKGICADETEVETIDHNDLDALEDICKT------------NKTVAYVADGVYSM-GGIAPVKELLRLQEKYGLFLYI 214 (402)
T ss_pred HHhhhhhhhcCCeEEEeCCCCHHHHHHHHhc------------CCCEEEEEeccccc-CCcCCHHHHHHHHHHcCCEEEE
Confidence 643 23334678888999999999988754 25788889998755 7788899999999999999999
Q ss_pred EccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcccEEE-eCHHHHHHHHhhCCCCcccCCCCHHHHHHHHH
Q 040324 276 DEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYGGYIA-GSKELIQYLKYNCPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 276 DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~-~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a 353 (488)
||+|+++++|++|.+ ..++++....+.++++.|+||++|++||+++ .++++++.+....++++++.+.+++.++++++
T Consensus 215 DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a 294 (402)
T PRK07505 215 DDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASGGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILA 294 (402)
T ss_pred ECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccCeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHH
Confidence 999988899999987 4567776223456888999999998888876 47899999988777778876677889999999
Q ss_pred HHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCc
Q 040324 354 AIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT 433 (488)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~ 433 (488)
+++++..+ ...++.++++++.+.+.+.+... + .....++.++.+..+....++.+.|+++||++.+..+|..
T Consensus 295 ~l~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~---~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~ 366 (402)
T PRK07505 295 SAEIHLSE----ELDQLQQKLQNNIALFDSLIPTE---Q-SGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVV 366 (402)
T ss_pred HHHHHhcc----CcHHHHHHHHHHHHHHHHHHHhc---C-CCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCC
Confidence 99876322 33445566666655544432211 1 1112233344443333567899999999999998777766
Q ss_pred cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 434 PLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 434 ~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+.+.+++||+|++.+|+||+++++++|++++++
T Consensus 367 ~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 367 AKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 655679999999999999999999999998754
No 21
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-43 Score=361.68 Aligned_cols=356 Identities=16% Similarity=0.200 Sum_probs=283.7
Q ss_pred ccCCCccCCCC-ceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC
Q 040324 66 CFGRPLSSAPD-AWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 66 ~~~~~i~~~~G-~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (488)
.++..+.+++| +|+||.| |++||||.+ +....+||+||++.+|+.+|+++....+ + +.
T Consensus 62 ~~~~~~~~~~G~~~l~D~d---------------G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~--~~ 121 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQ---------------GQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---Q--EL 121 (459)
T ss_pred CCCeeEEeccCeEEEEECC---------------CCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---c--cc
Confidence 45667899999 9999999 999999954 4667899999999999999999864332 1 12
Q ss_pred ChhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhc---ccC---CCcEEEEeCCCchHHHHHHHhcCCe-------
Q 040324 144 TLALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPV---LMG---KGSLIISDSLNHNSIVNGARGSGAT------- 208 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~---~~~---~~~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (488)
.++...+|.++|++.++. +++++++||++||+.+++. +++ +..+|.+...+|+.+...+..++..
T Consensus 122 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 201 (459)
T PRK11522 122 LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFM 201 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCC
Confidence 467778999999998754 5789999999999766654 343 4467777889999988776655421
Q ss_pred -----EEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccc
Q 040324 209 -----IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAH 279 (488)
Q Consensus 209 -----v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~ 279 (488)
+..++++|.+++++.+++.... +...++||+||+++++|.+.| |++++++|++||++||+||||
T Consensus 202 ~~~~~~~~~~~~d~~~l~~~l~~~~~~-------~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 274 (459)
T PRK11522 202 PLLPGFRHVPFGNIEAMRTALSECKKT-------GDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ 274 (459)
T ss_pred CCCCCCcccCCCCHHHHHHHHHHhhcc-------CCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce
Confidence 3356778999999988653111 236889999999999999887 999999999999999999999
Q ss_pred cccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh--CCCCcccCCCCHHHHHHHHH
Q 040324 280 SIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN--CPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 280 s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~--~~~~~~~~~~~p~~~aa~~a 353 (488)
+ +|||+|++ .++++|+.| ||+ |++|++|++ .|++++++++++.+... .++++|+ +||+.|+++++
T Consensus 275 t--G~GRtG~~~a~e~~gv~P---Div--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~--gnp~~~Aaala 345 (459)
T PRK11522 275 T--GMGRTGKMFACEHENVQP---DIL--CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFG--GNPLACAAALA 345 (459)
T ss_pred e--cCCccchhhhhhccCCCC---CEE--EechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCC--CCHHHHHHHHH
Confidence 9 89999998 789999988 777 999999863 48888889998877532 2344444 89999999999
Q ss_pred HHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe-ecCC--CCCCeEEEEeCCcchHHHHHHHHHHCCceEEee
Q 040324 354 AIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFE-VLGD--NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTV 428 (488)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 428 (488)
+|++++ .+++.+++++++++|+++|+++ .++ .+.+ ..+.++.+.+..+.....+++.|+++||++.+.
T Consensus 346 ~L~~i~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~ 418 (459)
T PRK11522 346 TINVLL-------EQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGT 418 (459)
T ss_pred HHHHHh-------cchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEec
Confidence 999993 3568899999999999999876 232 2111 236788888876656678999999999999742
Q ss_pred cCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 429 GFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 429 ~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
+ .+.+++||+||+.+|++|+|+++++|+++++++..
T Consensus 419 ~-----~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 419 L-----NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred C-----CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 2 13479999999999999999999999999988754
No 22
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=1.5e-43 Score=358.00 Aligned_cols=346 Identities=16% Similarity=0.184 Sum_probs=274.8
Q ss_pred ccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHH
Q 040324 71 LSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHN 149 (488)
Q Consensus 71 i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (488)
+.++.|+|+||.| |++||||.+ .....+||+||.+.+|+.+|+++....+ + +..++...
T Consensus 61 ~~~~~g~~l~D~d---------------G~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~--~~~~~~~~ 120 (442)
T TIGR03372 61 WQAGGLNTLIDTQ---------------GNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---Q--ELLDPLRA 120 (442)
T ss_pred EEeCCeeEEEECC---------------CCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---c--ccCCHHHH
Confidence 3577779999999 999999954 4567899999999999999999864332 1 12466778
Q ss_pred HHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhc---cc---CCCcEEEEeCCCchHHHHHHHhcCC------------eE
Q 040324 150 ELEECVARFVGK--PAAIVFGMGYVTNSSILPV---LM---GKGSLIISDSLNHNSIVNGARGSGA------------TI 209 (488)
Q Consensus 150 ~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~---~~---~~~~~Vl~~~~~h~~~~~~~~~~g~------------~v 209 (488)
+|.++|++.++. +.+++++||+|||+.+++. .+ ++..+|.+...+|+.+...+..++. .+
T Consensus 121 ~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~ 200 (442)
T TIGR03372 121 LLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGF 200 (442)
T ss_pred HHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCC
Confidence 999999998764 4688899999999766554 32 5556777888899998877665432 23
Q ss_pred EEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccccC
Q 040324 210 RVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
..++.+|.+++++.+++.... +...++||+||+++++|.+.| |++++++|++||+++|+||||+ +||
T Consensus 201 ~~~p~~d~~~~~~~l~~~~~~-------~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t--G~G 271 (442)
T TIGR03372 201 HHVAFGDIEAMLKALNECKKT-------GDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT--GMG 271 (442)
T ss_pred EEeCCCCHHHHHHHHHHHhcC-------CCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc--CCC
Confidence 556788999998888653211 236899999999999999887 9999999999999999999999 899
Q ss_pred CCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh--CCCCcccCCCCHHHHHHHHHHHHHHh
Q 040324 286 KTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN--CPAHLYATSISPPAAEQIISAIQVVI 359 (488)
Q Consensus 286 ~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~--~~~~~~~~~~~p~~~aa~~a~L~~i~ 359 (488)
|+|.+ .++++|+.| ||+ |++|++|++ .|++++++++++.+... .++.+|+ +||+.|++++++|+++
T Consensus 272 RtG~~~a~e~~gv~P---Div--t~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~--gnp~~~Aaa~a~L~~i- 343 (442)
T TIGR03372 272 RTGKMFACEHEGVQP---DIL--CLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFG--GNPLACAAALATINEL- 343 (442)
T ss_pred ccccchhhhhcCCCC---Cee--eehhhhcCCcccceEEEecHHHHHhhhccCccccCCCC--CCHHHHHHHHHHHHHH-
Confidence 99998 788999988 777 899999853 48888899999888432 3444444 8999999999999999
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Ce-ecC--CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCcc
Q 040324 360 GEDGSCRGAQKLARIRENSNFFRSKLQKMG--FE-VLG--DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATP 434 (488)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 434 (488)
+.+++.+++++++++|++.|+++. ++ .+. ...+.++.+.+..+.....+++.|+++||++.+.++
T Consensus 344 ------~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~~---- 413 (442)
T TIGR03372 344 ------LEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGTLN---- 413 (442)
T ss_pred ------HhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCChHHHHHHHHHHHHCCcEEeecCC----
Confidence 345688899999999999998762 22 111 234678888887665667899999999999975332
Q ss_pred CCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 435 LLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 435 ~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+.+.+||+||+.+|++|+|++++++++++
T Consensus 414 -~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 414 -NAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred -CCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 13789999999999999999999998863
No 23
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3.7e-43 Score=339.62 Aligned_cols=348 Identities=18% Similarity=0.179 Sum_probs=282.6
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEe-ccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNL-GSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
+|..+.+++|+++||+| |++|||+ .++.++.+||+||.|.+|+++|+++ |..++ .++
T Consensus 35 ~P~fi~~g~Ga~l~DvD---------------Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~-G~~fg------~Pt 92 (432)
T COG0001 35 YPIFIERGKGAYLTDVD---------------GNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER-GLSFG------APT 92 (432)
T ss_pred CCeeEEeccCCeEEeCC---------------CCEeeehhccCcccccCCCCHHHHHHHHHHHHh-cCCCC------CCC
Confidence 77888999999999999 9999999 6788899999999999999999998 44443 355
Q ss_pred hhHHHHHHHHHHHhCC-CCeEEeCCcHHHHhh---hhhcccCCCcEEEEeCCCchHHHHHHHhcC---------------
Q 040324 146 ALHNELEECVARFVGK-PAAIVFGMGYVTNSS---ILPVLMGKGSLIISDSLNHNSIVNGARGSG--------------- 206 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~-~~~i~~~sGs~a~~~---~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g--------------- 206 (488)
+...++.+.+++.++. |.+.+++|||||++. ++++++++..+|.++..||+.....+.-.|
T Consensus 93 e~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp 172 (432)
T COG0001 93 ELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVP 172 (432)
T ss_pred HHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCC
Confidence 6678899999999988 899999999999854 566788999999999999988765543221
Q ss_pred ----CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 040324 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 207 ----~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~ 278 (488)
..+..+++||++++++++++. +...++||+||+.++.|.+.| |++|+++|++||++||+||+
T Consensus 173 ~~~a~~ti~~~yND~~al~~~~~~~----------g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 173 ADVAKHTLVLPYNDLEALEEAFEEY----------GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred hhhhccEEEecCCCHHHHHHHHHHc----------CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 245778899999999999874 347999999999999999886 99999999999999999999
Q ss_pred ccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCc-ccCCCCHHHHHHHHHHH
Q 040324 279 HSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHL-YATSISPPAAEQIISAI 355 (488)
Q Consensus 279 ~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~-~~~~~~p~~~aa~~a~L 355 (488)
++ +|.-.-.++.+++|++| |+. ||+|.+|++- |++.+++++|+.+......+. .+.++||++++|++++|
T Consensus 243 iT--GFR~~~gGaq~~~gi~P---Dlt--tlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl 315 (432)
T COG0001 243 IT--GFRVALGGAQGYYGVEP---DLT--TLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATL 315 (432)
T ss_pred hh--hcccCCcccccccCcCc---chh--hhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHH
Confidence 99 77544466899999999 555 9999998633 999999999998876554322 23469999999999999
Q ss_pred HHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCc-------------chHHHHHHHH
Q 040324 356 QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNP-------------AKVSSFSREC 418 (488)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l 418 (488)
+.++. .+...+++.+.+++|+++|++. |+++....-+.++.+.+... .....+.+.|
T Consensus 316 ~~l~~------~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~ 389 (432)
T COG0001 316 EELMT------EEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHL 389 (432)
T ss_pred HHHHh------cccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHH
Confidence 99842 1336788888888888888764 77776666677888877542 1234677799
Q ss_pred HHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 419 LKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 419 ~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+++||++.|..| =...+|..||++|||+.+++++++++++.
T Consensus 390 l~~GV~l~ps~~---------ea~flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 390 LNRGVYLAPSQF---------EAGFLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred HhCCcccCCccc---------cceeeecccCHHHHHHHHHHHHHHHHHhh
Confidence 999999986332 22345679999999999999999988764
No 24
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=1.6e-41 Score=343.41 Aligned_cols=369 Identities=36% Similarity=0.640 Sum_probs=305.3
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.+++.+.+++|++++ .| |+++|||++++++|++. +|.+.+++.+++++++...+.++...|..
T Consensus 15 ~~~~~~~~~~g~~~~-~~---------------g~~~id~~~~~~~g~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~g~~ 77 (385)
T TIGR01825 15 ISIRVLESAQGPRVR-VN---------------GKEVINLSSNNYLGFAD-HPRLKEAAAQAIQQYGVGAGAVRTIAGTL 77 (385)
T ss_pred ccccccccCCCceEE-EC---------------CceEEEeeccCccCCCC-CHHHHHHHHHHHHHcCCCCCccCcccCCc
Confidence 356779999999999 88 99999999887777753 58999999999988766554444556778
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHH
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLR 225 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~ 225 (488)
+...++++.++++++.+.++++++|++++..++.++.+++|.|+++.++|+++..++...+.++..+++.|++++++.+.
T Consensus 78 ~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~l~ 157 (385)
T TIGR01825 78 RLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYKHADMDDLDRVLR 157 (385)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHH
Confidence 88899999999999988899999999999888888899999999999999999988888899888888889999998887
Q ss_pred HHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEE
Q 040324 226 EQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIM 305 (488)
Q Consensus 226 ~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~ 305 (488)
+... .++.+|+++++++++|.+.++++|.++|++||+++|+||+|+.|.++++|.+...+++++ .++|++
T Consensus 158 ~~~~---------~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 227 (385)
T TIGR01825 158 ENPS---------YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQ 227 (385)
T ss_pred hhcc---------CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEE
Confidence 5321 145677889999999999999999999999999999999998777887776655666776 467899
Q ss_pred EcccccccCCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Q 040324 306 MGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKL 385 (488)
Q Consensus 306 ~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L 385 (488)
+.||||++|..|||+++++++++.+......+.+++..+|+.++++.++++.+.. ..+..+++.++++++.+.|
T Consensus 228 ~~s~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~------~~~~~~~~~~~~~~l~~~L 301 (385)
T TIGR01825 228 VGTLSKAIGVVGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR------SPELMERLWDNTRFFKAGL 301 (385)
T ss_pred EEeccHHhhcCCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHH
Confidence 9999999998889999999999988765544444545678888888888887631 2357788888999999999
Q ss_pred HhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 386 QKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 386 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+++|+++..+ .++++++.+.......++++.|+++||.+...+|+..+.+.+++|+++++.+|++|+++++++|+++++
T Consensus 302 ~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~ 380 (385)
T TIGR01825 302 GKLGYDTGGS-ETPITPVVIGDEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGK 380 (385)
T ss_pred HHcCCCCCCC-CCCEEEEEECCHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 9998887644 356777665443346689999999999987666666566668999999999999999999999999987
Q ss_pred HhC
Q 040324 466 LVG 468 (488)
Q Consensus 466 ~~~ 468 (488)
+++
T Consensus 381 ~~~ 383 (385)
T TIGR01825 381 ELG 383 (385)
T ss_pred HhC
Confidence 654
No 25
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=9.2e-43 Score=352.64 Aligned_cols=341 Identities=16% Similarity=0.201 Sum_probs=274.5
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|++|.| |++||||. +.....+||+||++.+|+.+|++++..... . ..
T Consensus 21 ~~p~~~~~~~G~~l~d~~---------------G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~---~--~~ 80 (396)
T PRK04073 21 PLPIVISEAEGVWVKDPE---------------GNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR---A--FH 80 (396)
T ss_pred CCCceEEeeeecEEEECC---------------CCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc---c--cC
Confidence 456678899999999999 99999995 445678999999999999999998764331 1 24
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-----------cCCCcEEEEeCCCchHHHHHHHhcCCe-----
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-----------MGKGSLIISDSLNHNSIVNGARGSGAT----- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-----------~~~~~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (488)
++...+|+++|+++.+.+++++++||++|++.+++.+ .++.++|.++..+|+.+..++.+++..
T Consensus 81 ~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~ 160 (396)
T PRK04073 81 SDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRG 160 (396)
T ss_pred CHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccC
Confidence 5677899999999998889999999999998777654 345667888889999988777665421
Q ss_pred -------EEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 040324 209 -------IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 209 -------v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE 277 (488)
+..++++|++++++.+.+ +.++|+++++++++|.+.+ +++|+++|++||++||+||
T Consensus 161 ~~~~~~~~~~~~~~d~~~l~~~i~~-------------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DE 227 (396)
T PRK04073 161 FGPMLPGIKKIPYGDLEALKAAITP-------------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADE 227 (396)
T ss_pred CCCCCCCceEeCCCCHHHHHHhccc-------------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 356778899999887753 4678999999999998875 8999999999999999999
Q ss_pred cccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHH
Q 040324 278 AHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 278 ~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a 353 (488)
+|+ ++|++|.. ..++.++.| |++ +|||++|++| |++++++++++.+....+..+++ ++|+.++++++
T Consensus 228 v~~--g~g~~g~~~~~~~~~~~p---di~--~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~--~~~~~~aaa~a 298 (396)
T PRK04073 228 IQT--GLGRTGKLFACDWDNVTP---DMY--ILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFG--GNPLACAVSIA 298 (396)
T ss_pred chh--CCCcCcHHHHhhhcCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCC--CCHHHHHHHHH
Confidence 999 89999876 456677766 666 8999998765 99999999999887655555555 89999999999
Q ss_pred HHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC--CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCC
Q 040324 354 AIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG--DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFP 431 (488)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 431 (488)
+|+.++ .+++.++.++++++|.+.|++++.+... ...+.++.+.+. ....++.++|+++||++.+.
T Consensus 299 aL~~~~-------~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~~--~~~~~~~~~l~~~Gv~~~~~--- 366 (396)
T PRK04073 299 ALEVLE-------EEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVELN--EPARPYCEALKEEGLLCKET--- 366 (396)
T ss_pred HHHHHH-------hcCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEec--chHHHHHHHHHHCCeEEecC---
Confidence 999873 2456788888999999999987532222 223466666654 24568999999999998741
Q ss_pred CccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 432 ATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+.+++||+||+.+|+||+|+++++|++++
T Consensus 367 ----~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 367 ----HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ----CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 23689999999999999999999998875
No 26
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-44 Score=325.67 Aligned_cols=355 Identities=16% Similarity=0.203 Sum_probs=285.8
Q ss_pred HHHHHHHHHhhhhcccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEe-ccccccCCCCCCccchHHHHHHHHH
Q 040324 52 EDFYIRRLYNRVQDCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNL-GSYNYLGFAAADEYCTPRVIDSLKK 130 (488)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l~~ 130 (488)
|.-|..+.|+ +.|..+.+++|+++||.+ |++|+|| ++|+..+.||+||.+.+++++|.++
T Consensus 30 E~k~~ahnyh----pLpvvf~ka~g~~vwD~e---------------Gk~ylDflsaysaVnqGhchpki~~aLqeq~~k 90 (427)
T KOG1402|consen 30 ENKYGAHNYH----PLPVVFSKAKGSRVWDPE---------------GKEYLDFLSAYSAVNQGHCHPKIIKALQEQADK 90 (427)
T ss_pred hhhcccccCC----cCceEEEecCCcEEECCC---------------ccchhhhhhhhhhcccCCCCHHHHHHHHHHHhH
Confidence 3334444444 445567899999999999 9999999 7789999999999999999999998
Q ss_pred cCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc-----------CCCcEEEEeCCCchHHH
Q 040324 131 YSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM-----------GKGSLIISDSLNHNSIV 199 (488)
Q Consensus 131 ~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~-----------~~~~~Vl~~~~~h~~~~ 199 (488)
+-.. +|.+ +.....++++.+++++|.++++-.++|.||++.+++... .+..++...+..|+.+.
T Consensus 91 Ltls---sraf--Ynd~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~ 165 (427)
T KOG1402|consen 91 LTLS---SRAF--YNDVLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTL 165 (427)
T ss_pred hhhh---hHHH--hhhhHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCcee
Confidence 6332 3333 356668999999999999999999999999977665432 12223344566777776
Q ss_pred HHHHhcCC-------------eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHH
Q 040324 200 NGARGSGA-------------TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEI 262 (488)
Q Consensus 200 ~~~~~~g~-------------~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l 262 (488)
.++.+++- .+..++++|.++|+.+|++ .+.+++++|||++..|.+.| |+++
T Consensus 166 ~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~------------~~vaaFivEPIQGEaGVvvP~~GYL~~v 233 (427)
T KOG1402|consen 166 GAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS------------PNVAAFIVEPIQGEAGVVVPPPGYLKKV 233 (427)
T ss_pred eeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC------------CCeeEEEeeccccccceEeCCchhHHHH
Confidence 66555432 2566788999999999986 27899999999999998885 9999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCc
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHL 338 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~ 338 (488)
++||++|++++|.||+|+ ++||||+. +++|.++.| |++ -|+|+++++- ++++.++++|-.+.+..|+.+
T Consensus 234 reLCtkynvl~I~DEvQT--Gl~RTGk~la~d~env~P---Div--ilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsT 306 (427)
T KOG1402|consen 234 RELCTKYNVLLIADEVQT--GLARTGKLLACDYENVRP---DIV--ILGKALSGGVYPVSAVLADDDIMLNIKPGEHGST 306 (427)
T ss_pred HHHHHhhcEEEEehhhhh--cccccCcEEEeehhhcCC---CeE--EEeccccCCeeeeEEEEecHHHHhccCCCccccc
Confidence 999999999999999999 99999998 889999988 777 6999997532 778899999999999999989
Q ss_pred ccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee---cCC--CCCCeEEEEeCC----cc
Q 040324 339 YATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEV---LGD--NDSPVMPIMVYN----PA 409 (488)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~---~~~--~~~~~~~~~~~~----~~ 409 (488)
|+ +||+.|++++++|++| ..+++.++.+.++..|+.+|+++.-++ ... ..+.+..+.+.. ..
T Consensus 307 yg--gNpLg~~vaiAalevi-------~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~ 377 (427)
T KOG1402|consen 307 YG--GNPLGCAVAIAALEVI-------VEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQ 377 (427)
T ss_pred cC--CChHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccch
Confidence 88 9999999999999999 668999999999999999999884322 111 234445555532 23
Q ss_pred hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 410 KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.+.++|-.|.++|++..| +. .+.+||.||+.++++|+++.+++|++.+.
T Consensus 378 ~aw~~cl~lk~~g~LAkp----tH---~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 378 DAWDVCLALKENGLLAKP----TH---GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred hHHHHHHcccccccccCC----CC---CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 566888888899998874 22 36999999999999999999999998764
No 27
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=2.2e-42 Score=353.38 Aligned_cols=351 Identities=17% Similarity=0.159 Sum_probs=266.2
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|..+.+++|+++||.| |++||||.++ ....+||+||++.+|+++|+++++.... ...+.+
T Consensus 36 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~---~~~~~~ 97 (460)
T PRK12403 36 GPRVMVRGEGLHLWDND---------------GKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNM---FFHTTH 97 (460)
T ss_pred CCceEEeceeeEEEeCC---------------CCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeec---ccccCC
Confidence 45678999999999999 9999999543 5567888999999999999999754321 222457
Q ss_pred hhHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhccc------C-CCc--EEEEeCCCchHHHHHHHhcCCe------
Q 040324 146 ALHNELEECVARFVG--KPAAIVFGMGYVTNSSILPVLM------G-KGS--LIISDSLNHNSIVNGARGSGAT------ 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~~------~-~~~--~Vl~~~~~h~~~~~~~~~~g~~------ 208 (488)
+...+|+++|+++++ .+++++++||++||+.+++.+. + +++ +|.....+|+++..++.+++..
T Consensus 98 ~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~ 177 (460)
T PRK12403 98 PAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMG 177 (460)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccC
Confidence 778999999999987 4689999999999987776552 3 222 3345678899998888776533
Q ss_pred -----EEEeeCC-------C----------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHH
Q 040324 209 -----IRVFQHN-------T----------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEI 262 (488)
Q Consensus 209 -----v~~~~~~-------d----------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l 262 (488)
+..++.+ + +++|++.+.+. .+...++||+|||++++|.+.+ |++|
T Consensus 178 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~---------~~~~iaavI~Epv~g~gG~~~~~~~yl~~l 248 (460)
T PRK12403 178 GLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL---------GAENVAGFVAEPFQGAGGMIFPPESYWPEI 248 (460)
T ss_pred CCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh---------CCCceEEEEEccccCCCCCccCCHHHHHHH
Confidence 1222211 1 24455554331 1236889999999999998886 9999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhhC----
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYNC---- 334 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~~---- 334 (488)
+++|++||++||+||||+ +|||+|++ +++++|+.| ||+ +++|++|++ -|++++++++++.+....
T Consensus 249 r~lc~~~g~lLI~DEV~t--GfGRtG~~~a~e~~gv~P---Div--~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~ 321 (460)
T PRK12403 249 QRICRQYDVLLCADEVIG--GFGRTGEWFAHEHFGFEP---DTL--SIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFA 321 (460)
T ss_pred HHHHHHcCCEEEEecccc--CCCcCchhhhhhhcCCCC---CeE--EEcccccccccceEEEEECHHHHHHHhcCCCccc
Confidence 999999999999999998 99999998 679999998 787 899999753 377778999999886422
Q ss_pred CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH-HHHHHHHHHHHhC--CCeecC--CCCCCeEEEEeCCcc
Q 040324 335 PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR-ENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMVYNPA 409 (488)
Q Consensus 335 ~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~~ 409 (488)
+++||+ +||+.|++++++|++++ .+++.++++ +++++|++.|+++ ..++.. ...+.++.+.+....
T Consensus 322 ~~~T~~--gnPl~~Aaala~L~~i~-------~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~ 392 (460)
T PRK12403 322 HGLTYS--GHPVAAAVAIANLKALR-------DEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDK 392 (460)
T ss_pred cCCCCC--CCHHHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCc
Confidence 333444 99999999999999993 345788886 8999999988764 222222 223566677664221
Q ss_pred -----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 410 -----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 410 -----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
....+.+.|+++|+++.+. .+.+||+||+.+|++|+|+++++++++++++.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~--------~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 393 ATRKRFANENDLAWRCRTIGFEEGVIIRST--------LGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred cccccccchhHHHHHHHHHHHhCCEEEEec--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1234567788999999731 14699999999999999999999999998764
No 28
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=2e-42 Score=353.10 Aligned_cols=354 Identities=15% Similarity=0.154 Sum_probs=269.6
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
|..+.+++|+|+||.| |++||||.+ .....+||+||++.+|+.+|+++...... . ..++
T Consensus 30 p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~-~~~~ 89 (451)
T PRK07678 30 TMVVAKAEGAWVTDIQ---------------GNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL----T-QSHE 89 (451)
T ss_pred CeeEEeeeeeEEEeCC---------------CCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc----c-cCCH
Confidence 5678999999999999 999999954 46678999999999999999998643321 1 1345
Q ss_pred hHHHHHHHHHHHhCCC-CeEEeCCcHHHHhhhhhcc---c------CCCcEEEEeCCCchHHHHHHHhcCCe--------
Q 040324 147 LHNELEECVARFVGKP-AAIVFGMGYVTNSSILPVL---M------GKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g~~-~~i~~~sGs~a~~~~~~~~---~------~~~~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (488)
...+|.++|++.++.. ++++.+||++|++.+++.. + ++..+|.+...+|+.+..++..++..
T Consensus 90 ~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 169 (451)
T PRK07678 90 PAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEP 169 (451)
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCC
Confidence 6689999999988654 6888899999997766543 2 34556777888999888777654321
Q ss_pred ----EEEeeCC--------------CH---HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHH
Q 040324 209 ----IRVFQHN--------------TP---SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEII 263 (488)
Q Consensus 209 ----v~~~~~~--------------d~---~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~ 263 (488)
+..++.+ |. +.++++++.. .+.+.++||+||+++..|.+.| |++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr 240 (451)
T PRK07678 170 LAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWE---------LSETIAAVIMEPIITGGGVLMPPQDYMKAVK 240 (451)
T ss_pred CCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhc---------CCCceEEEEEccccCCCCcccCCHHHHHHHH
Confidence 1122211 11 2234444321 1247899999999999998775 99999
Q ss_pred HHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhh------
Q 040324 264 TICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYN------ 333 (488)
Q Consensus 264 ~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~------ 333 (488)
++|++||++||+|||++ +|||+|.+ .++++|+.| ||+ |++|++|+++ |++++++++++.+...
T Consensus 241 ~lc~~~g~llI~DEV~t--GfGRtG~~~~~~~~gv~P---Div--t~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~ 313 (451)
T PRK07678 241 EICQKHGALLISDEVIC--GFGRTGKAFGFMNYGVKP---DII--TMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHF 313 (451)
T ss_pred HHHHHcCCEEEEeehhh--cCCcCchhHHHHhcCCCC---CEE--EeecccccCCcceeEEEEcHHHHHHHhccCccccc
Confidence 99999999999999999 99999976 678899998 777 9999998642 8899999999988642
Q ss_pred CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCC--
Q 040324 334 CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYN-- 407 (488)
Q Consensus 334 ~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~-- 407 (488)
.+++||+ +||++|++++++|++++ .+++.+++++++++|++.|+++ ++.......+.++.+.+..
T Consensus 314 ~h~~T~~--gnp~~~aaa~a~l~~l~-------~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~ 384 (451)
T PRK07678 314 RHVNTFG--GNPAACALALKNLEIME-------NENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDK 384 (451)
T ss_pred ccCCCCC--cCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCC
Confidence 2444555 99999999999999983 3468889999999999988654 3222122335777777732
Q ss_pred -------cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 408 -------PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 408 -------~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
......+...|+++||++.+ ..+..+...+++||+||+.+|++|||+++++++++++++
T Consensus 385 ~~~~~~~~~~a~~i~~~l~~~Gv~~~~-~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 385 ETKEPADNDKVASVVAACKEKGLIIGK-NGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred cccCcCchHHHHHHHHHHHHCCcEEee-cCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 12356788999999999975 224444445899999999999999999999999999765
No 29
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3e-42 Score=351.28 Aligned_cols=354 Identities=17% Similarity=0.197 Sum_probs=272.3
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
+|..+.+++|+++||.| |++||||. +.....+||+||++.+|+.+|++++..... ....+
T Consensus 24 ~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~----~~~~~ 84 (445)
T PRK08593 24 YPLVIDHGYGATLTDVD---------------GKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTP----AYMYH 84 (445)
T ss_pred CCceEEeeeeCEEEeCC---------------CCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccc----cccCC
Confidence 56778999999999999 99999995 446678999999999999999998643321 11245
Q ss_pred hhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCCe-----------
Q 040324 146 ALHNELEECVARFVGK---PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (488)
+...+|+++|++.++. ++++|++||++|++.+++ .++++..+|.++..+|+.+..++.+++..
T Consensus 85 ~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~ 164 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLL 164 (445)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCC
Confidence 7778999999998853 468888999999976655 46788888889999999988777665421
Q ss_pred --EEEeeCCC----------H-------HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHH
Q 040324 209 --IRVFQHNT----------P-------SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITI 265 (488)
Q Consensus 209 --v~~~~~~d----------~-------~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l 265 (488)
+..++.+| . +++++.+.+.. .+...++||+||+++++|.+.+ |++|+++
T Consensus 165 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~l 236 (445)
T PRK08593 165 PGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL--------PADEVACIVIETIQGDGGLLEPVPGYFEALYKF 236 (445)
T ss_pred CCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc--------CCCceEEEEEccccCCCCCcCCCHHHHHHHHHH
Confidence 22233221 1 22333332210 0136899999999999998876 9999999
Q ss_pred HHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHHHHhhCCCCcccCC
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQYLKYNCPAHLYATS 342 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~~~~~~~~~~~~~~ 342 (488)
|++||++||+||||+ +||++|.+ .++++++.| |++ |++|++|+ ++|++++++++++.+....+.++ .+
T Consensus 237 c~~~g~llI~DEv~t--g~GrtG~~~a~~~~gv~p---Di~--t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~~T--~~ 307 (445)
T PRK08593 237 CREHGILFAVDDIQQ--GLGRTGKWSSISHFNITP---DLM--SFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFT--TG 307 (445)
T ss_pred HHHcCCEEEEechhh--CCCcCchHHHHHhcCCCC---CEe--eecccccCCcccEEEEEcHHHHhhhccCCCCCC--CC
Confidence 999999999999999 99999987 678899988 666 99999975 35899999999998864444444 45
Q ss_pred CCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCC--CCCCeEEEEeCC--------cch
Q 040324 343 ISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGD--NDSPVMPIMVYN--------PAK 410 (488)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~--------~~~ 410 (488)
++|+.|++++++|++++ .+++.+++++++++|++.|+++ ..+++.+ ..+.++.+.+.. ...
T Consensus 308 ~~pl~~aaa~a~l~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~ 380 (445)
T PRK08593 308 ANPVSCAAALATIDMIE-------DESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEA 380 (445)
T ss_pred CCHHHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHH
Confidence 99999999999999983 4578899999999999999875 2222222 223455555532 123
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIK 470 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (488)
...+++.|+++||++.+.+ .+++||+||+.+|++|||+++++++++++++...
T Consensus 381 ~~~~~~~~~~~Gv~~~~~~-------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 433 (445)
T PRK08593 381 ALKICNYCFEHGVVIIAVA-------GNVLRFQPPLVITYEQLDTALNTIEQAFTALEAG 433 (445)
T ss_pred HHHHHHHHHHCCeEEeccC-------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 5679999999999987421 3689999999999999999999999999887543
No 30
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-42 Score=350.47 Aligned_cols=350 Identities=14% Similarity=0.164 Sum_probs=271.8
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||. +.....+||+||++.+|+++|+++...... . -.
T Consensus 34 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~----~-~~ 93 (451)
T PRK06062 34 INPMVIAGAEGSYVWDYE---------------GRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP----A-HA 93 (451)
T ss_pred CCCceEEeceeeEEEECC---------------CCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC----c-cC
Confidence 356778999999999999 99999995 456678999999999999999998643221 1 24
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCCe-----------
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (488)
++...+|.++|++..+. +++++++||++|++.+++ .++++..+|.+...+|+.+..++..++..
T Consensus 94 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~ 173 (451)
T PRK06062 94 NDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAG 173 (451)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCC
Confidence 56678999999998854 589999999999966554 45678888888999999988777665421
Q ss_pred EEEe--e------C---CC-------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHH
Q 040324 209 IRVF--Q------H---NT-------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITIC 266 (488)
Q Consensus 209 v~~~--~------~---~d-------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~ 266 (488)
+..+ + . +| +++|+++++.. .+.+.++||+|||++++|.+.| |++|+++|
T Consensus 174 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---------~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc 244 (451)
T PRK06062 174 VVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE---------GPSTIAAILLESVPGTAGILVPPPGYLAGVRELC 244 (451)
T ss_pred CEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc---------CCCceEEEEEccccCCCCcccCCHHHHHHHHHHH
Confidence 1111 1 1 22 45666666431 1236899999999999999887 99999999
Q ss_pred HHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC---cccEEEeCHHHHHHHHhh--CCCCccc
Q 040324 267 KRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS---YGGYIAGSKELIQYLKYN--CPAHLYA 340 (488)
Q Consensus 267 ~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~---~Gg~i~~~~~~~~~~~~~--~~~~~~~ 340 (488)
++||++||+||||+ +|||+|.+ +++++|+.| ||+ ||+|++|+ +.|++++++++++.+... .++++|+
T Consensus 245 ~~~g~lLI~DEV~t--GfGRtG~~~a~~~~gv~P---Di~--t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~ 317 (451)
T PRK06062 245 DRHGIVLIADEVMA--GFGRTGKWFAIEHFGVVP---DLI--TFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYS 317 (451)
T ss_pred HHcCCEEEeecccc--CCCcCcHHHHHHhcCCCC---Cee--eechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCC
Confidence 99999999999999 89999988 788999988 666 99999986 347888899999988643 3444555
Q ss_pred CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHH-HHHHHHHHhC--CCeec--CCCCCCeEEEEeCCcc------
Q 040324 341 TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENS-NFFRSKLQKM--GFEVL--GDNDSPVMPIMVYNPA------ 409 (488)
Q Consensus 341 ~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~-~~l~~~L~~~--g~~~~--~~~~~~~~~~~~~~~~------ 409 (488)
+||+.|++++++|++++ .+++.+++++.+ ++|++.|+++ ..+.. ....+.++.+.+..+.
T Consensus 318 --gnpl~~Aaa~a~L~~l~-------~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~ 388 (451)
T PRK06062 318 --GHPLACAAAVATINAME-------EEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPL 388 (451)
T ss_pred --CCHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCC
Confidence 99999999999999993 346888888888 5888888775 12221 1123466666663211
Q ss_pred --------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 410 --------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 410 --------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
....+.+.|+++||++.+. .+.+||+||+.+|++|||+++++++++++++.
T Consensus 389 ~~~~~~~~~~~~~~~~l~~~Gvl~~~~--------~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 389 APYGASSAAMAAVKAACKERGLLPFVN--------GNRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred cccchhhHHHHHHHHHHHHCCcEEeec--------CCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 2457889999999997631 26899999999999999999999999998764
No 31
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=4.7e-42 Score=348.01 Aligned_cols=348 Identities=15% Similarity=0.167 Sum_probs=276.3
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||.|+ ....+||+||++.+|+.+|++++..... . ..
T Consensus 20 ~~~~~~~~~~G~~~~d~d---------------G~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~--~---~~ 79 (406)
T PRK12381 20 PAPFIPVRGEGSRLWDQQ---------------GKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN--G---YT 79 (406)
T ss_pred CCCceEEEeecCEEEeCC---------------CCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC--c---cC
Confidence 567788999999999999 9999999653 3346777789999999999988533221 1 23
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCC--------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGA-------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (488)
++...+|+++|+++.+.+++++++||++||+.+++.. .++..+|.++..+|+.+..++.+++.
T Consensus 80 ~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 159 (406)
T PRK12381 80 NEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFA 159 (406)
T ss_pred CHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCC
Confidence 5667899999999988889999999999997776653 24556777888999998877666652
Q ss_pred ----eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEccc
Q 040324 208 ----TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLDEAH 279 (488)
Q Consensus 208 ----~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~~ 279 (488)
.+..++++|++++++.+.+ +.++|++||+++++|.+. ++++|+++|++||++||+||+|
T Consensus 160 ~~~~~~~~~~~~d~~~l~~~l~~-------------~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 226 (406)
T PRK12381 160 PLPPDIRHAAYNDLNSASALIDD-------------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ 226 (406)
T ss_pred CCCCCeeEeCCCCHHHHHHhccC-------------CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh
Confidence 2456788999999988753 567888899999999654 4999999999999999999999
Q ss_pred cccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHH
Q 040324 280 SIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQ 356 (488)
Q Consensus 280 s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (488)
+ ++|++|.+ ..+++++.| |++ ||||++|++ .|++++++++++.+....+..+++ ++|+.++++.++|+
T Consensus 227 t--G~gr~G~~~~~~~~~v~p---Di~--t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~~--~~pl~~aaa~a~l~ 297 (406)
T PRK12381 227 T--GVGRTGELYAYMHYGVTP---DVL--TTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTYG--GNPLASAVAGKVLE 297 (406)
T ss_pred h--CCCCCcchhhhHhhCCCC---CEE--EehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCCC--CCHHHHHHHHHHHH
Confidence 8 89999987 557788887 665 999999742 289999999999887655555555 99999999999999
Q ss_pred HHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeecC--CCCCCeEEEEeCCc--chHHHHHHHHHHCCceEEeecC
Q 040324 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEVLG--DNDSPVMPIMVYNP--AKVSSFSRECLKQNVAIVTVGF 430 (488)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~ 430 (488)
++. .+++++++++++++|++.|++++ +.+.. ...+.++++.+..+ .....+.+.|+++||++.+.
T Consensus 298 ~l~-------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-- 368 (406)
T PRK12381 298 LIN-------TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-- 368 (406)
T ss_pred HHh-------hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC--
Confidence 983 34688999999999999998864 22211 12345666666442 24568889999999999742
Q ss_pred CCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 431 PATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 431 ~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
+.+++||+|++.+|++|||+++++|+++++++..
T Consensus 369 -----g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 369 -----GPNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred -----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 2368999999999999999999999999987743
No 32
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-42 Score=350.74 Aligned_cols=352 Identities=17% Similarity=0.220 Sum_probs=272.4
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhh
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLAL 147 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (488)
..+.+++|+++||.| |++||||+|+ ....+||+||++.+|+++|++++........ ..+.
T Consensus 27 ~~~~~~~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~----~~~~ 87 (433)
T PRK08117 27 LPVVKGEGCYYYGVD---------------GKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVI----YYES 87 (433)
T ss_pred ceEEeeeeeEEEeCC---------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccccc----CCHH
Confidence 678999999999999 9999999654 4567889999999999999998755432211 4577
Q ss_pred HHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhc---ccCCCcEEEEeCCCchHHHHHHHhcCCe-------------E
Q 040324 148 HNELEECVARFVG--KPAAIVFGMGYVTNSSILPV---LMGKGSLIISDSLNHNSIVNGARGSGAT-------------I 209 (488)
Q Consensus 148 ~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~---~~~~~~~Vl~~~~~h~~~~~~~~~~g~~-------------v 209 (488)
..+|+++|+++++ .+.++|.+||++||+.+++. ++++.++|.++..+|+++..++..++.. +
T Consensus 88 ~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 167 (433)
T PRK08117 88 ILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSV 167 (433)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCc
Confidence 7899999999983 34677779999999776654 5678888899999999988776544311 1
Q ss_pred EEeeC-----------------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHH
Q 040324 210 RVFQH-----------------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKR 268 (488)
Q Consensus 210 ~~~~~-----------------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~ 268 (488)
..++. +|++++++++++... +...++||+|||+++.|.+.+ |++|+++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~ 239 (433)
T PRK08117 168 YQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT--------PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDR 239 (433)
T ss_pred EEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC--------CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHH
Confidence 12221 145566666653211 236889999999999999988 9999999999
Q ss_pred cCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCH
Q 040324 269 YKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISP 345 (488)
Q Consensus 269 ~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p 345 (488)
||++||+||+|+ +||++|++ ..+++++.| |++ |++|++|++ .|++++++++++.+....++++++ +||
T Consensus 240 ~g~llI~DEv~t--G~gr~G~~~~~~~~gv~p---Di~--t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~~--~np 310 (433)
T PRK08117 240 HGILLIFDEVQT--GFGRTGEWFAAQTFGVVP---DIM--TIAKGIASGLPLSAVVASKELMEQWPLGSHGTTFG--GNP 310 (433)
T ss_pred cCCEEEEecchh--ccCccccchhHhhcCCCC---CEe--ehhhhccCCCcceeEEEcHHHHhhccCCCCCCCCC--cCH
Confidence 999999999999 79999988 457889887 665 999999852 389999999998886555555555 899
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Ceec--CCCCCCeEEEEeCCc------chHHHHH
Q 040324 346 PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEVL--GDNDSPVMPIMVYNP------AKVSSFS 415 (488)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~--~~~~~~~~~~~~~~~------~~~~~~~ 415 (488)
+.+++++++|+.++ .+++.++++++++++++.|+++. .++. ....+.++.+.+..+ .....+.
T Consensus 311 ~~~aaa~a~L~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~ 383 (433)
T PRK08117 311 VACAAALATLEVIK-------EEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKIL 383 (433)
T ss_pred HHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHH
Confidence 99999999999983 34688889999999999998762 2221 122235556666322 2356788
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+.|+++||++.+.+. ..+++||+||+.+|++||++++++|+++++++.
T Consensus 384 ~~l~~~Gv~~~~~g~-----~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 384 DKCLEKGLLFYLCGN-----AGNVLRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred HHHHHCCCEEeecCC-----CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999875321 247999999999999999999999999998763
No 33
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=4.3e-42 Score=351.15 Aligned_cols=354 Identities=14% Similarity=0.145 Sum_probs=271.4
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
..|..+.+++|+++||.| |++||||.| .....+||+||++.+|+++|+++.+.....+. ..
T Consensus 29 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~---~~ 90 (460)
T PRK06105 29 EGPLVIERGEGIYVYDDA---------------GKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSH---KS 90 (460)
T ss_pred cCCceEEeeeEEEEEECC---------------CCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccc---cC
Confidence 346778999999999999 999999954 46688999999999999999998654322111 24
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe-----
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT----- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (488)
++...+|+++|++.++. +++++.+||++|++++++.. +++..+|.+...+|+.+..+..+++..
T Consensus 91 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~ 170 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRS 170 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccc
Confidence 56778999999998864 57888999999998777653 245667777899999987765554421
Q ss_pred -------EEEeeCC------------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----h
Q 040324 209 -------IRVFQHN------------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----L 259 (488)
Q Consensus 209 -------v~~~~~~------------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l 259 (488)
+..+++. +.+++++.+... .+.+.++||+||+++++|.+.+ |
T Consensus 171 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~---------~~~~iAavIvEPiqg~gG~~~~~~~yl 241 (460)
T PRK06105 171 FDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE---------GPDTIAAFIGEPVMGAGGVIVPPKTYW 241 (460)
T ss_pred cCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc---------CCCceEEEEEccccCCCCCccCCHHHH
Confidence 1112211 134566665431 1236899999999999998876 9
Q ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhhCC
Q 040324 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYNCP 335 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~~~ 335 (488)
++|+++|++||+++|+||||+ +|||+|++ .++++++.| ||+ +++|++|++ .|++++++++++.+.....
T Consensus 242 ~~lr~lc~~~~~llI~DEv~t--G~GRtG~~f~~~~~~v~P---Di~--~~gK~lggG~~P~~av~~~~~i~~~~~~~~~ 314 (460)
T PRK06105 242 EKIQAVLRKYDILLVADEVIC--GFGRTGNMFGCETFGIKP---DIL--VMSKQLSSSYQPLSAVLMNEKVYDPIADESG 314 (460)
T ss_pred HHHHHHHHHcCCeEEEecccc--CCCcCchhhhHHhcCCCC---Cee--eeecccccCcccceEEEEcHHHHHHHhcccc
Confidence 999999999999999999999 99999988 678899988 777 999999763 5999999999998864211
Q ss_pred -----CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecC--CCCCCeEEEEeCC
Q 040324 336 -----AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLG--DNDSPVMPIMVYN 407 (488)
Q Consensus 336 -----~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~ 407 (488)
.+.++.++||+.|++++++|++++ .+++.+++++++++|+++|+++ ..+++. ...+.++.+.+..
T Consensus 315 ~~~~~~h~~T~~gnpl~~aaa~a~L~~i~-------~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~ 387 (460)
T PRK06105 315 KIGTFGHGFTASGHPVAAAVALENLAIIE-------ERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVA 387 (460)
T ss_pred cCcccccCCCCCCCHHHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEec
Confidence 123344599999999999999994 4578899999999999999876 112111 1234566666632
Q ss_pred c-----------chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 408 P-----------AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 408 ~-----------~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+ .....+.+.|+++||++.+. .+.+||+||+.+|++|||+++++++++++++.
T Consensus 388 ~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~--------g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 388 DKATKTPFEPPGKVGARANAAAHEHGVISRAM--------GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred CcccCCCCCchhHHHHHHHHHHHHCCeEEEec--------CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 1 11357888999999999742 16899999999999999999999999998764
No 34
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=5e-41 Score=339.79 Aligned_cols=361 Identities=30% Similarity=0.535 Sum_probs=297.0
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhH
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALH 148 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (488)
+.+.+++|+++++ + |++||||++++++|+. ++|.+.+++.+++++++.+.+.++...|..+..
T Consensus 24 ~~~~~~~g~~~~~-~---------------g~~~id~~~~~~~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~ 86 (385)
T PRK05958 24 RPREGGAGRWLVV-D---------------GRRMLNFASNDYLGLA-RHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAH 86 (385)
T ss_pred cccccCCCceeEe-C---------------CceEEEeeCCCcccCC-CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHH
Confidence 5788999999996 8 9999999987666654 358899999999998876555555555777888
Q ss_pred HHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHH
Q 040324 149 NELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQI 228 (488)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~ 228 (488)
.++++.++++++.++.+++++|++++..++..++++||.|+++.++|+++..++...|.+++.++.+|++++++.++..
T Consensus 87 ~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~- 165 (385)
T PRK05958 87 EALEEELAEWFGAERALLFSSGYAANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPHNDVDALEALLAKW- 165 (385)
T ss_pred HHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhc-
Confidence 9999999999998889999999999877778889999999999999999999999999999999999999999988641
Q ss_pred hcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcc
Q 040324 229 AEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGT 308 (488)
Q Consensus 229 ~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t 308 (488)
+.++++++++++++++|...++++|+++|++||++||+||+|+.|.++++|.+.....+++..+.++++.|
T Consensus 166 ---------~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s 236 (385)
T PRK05958 166 ---------RAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGT 236 (385)
T ss_pred ---------cCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEe
Confidence 11467888999999999999999999999999999999999987777777765444445543344688899
Q ss_pred cccccCCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 309 FSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 309 ~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
+||++|..|||+++++++++.+......+.++.+.++..++++.++|+.+.. .+++.+++.++.+++.+.|++.
T Consensus 237 ~sK~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~------~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 237 LGKALGSSGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRR------EPERRERLAALIARLRAGLRAL 310 (385)
T ss_pred chhhcccCCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc------CHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998889999999998887655444445555788888888899987732 1567889999999999999998
Q ss_pred CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 389 GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
++++.. +.+.++++.+.......++.+.|+++||.+.+.+.+..+.+.+++||+++..+|++|+++++++|+++
T Consensus 311 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 311 GFQLMD-SQSAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred CCCcCC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 887654 35677777765444567899999999999987554444445579999999889999999999999875
No 35
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=5.5e-41 Score=336.30 Aligned_cols=360 Identities=32% Similarity=0.613 Sum_probs=296.8
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhH
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALH 148 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (488)
+|..+++|.++. .+ |+++|||++++++|+. .+|.+.+++.+++++++..++.++...|..+..
T Consensus 1 ~~~~~~~~~~~~-~~---------------g~~~id~~~~~~~g~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~ 63 (360)
T TIGR00858 1 RPLDRGPGPEVV-RD---------------GRRLLNFSSNDYLGLA-SHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLH 63 (360)
T ss_pred CCcccCCCCeEE-EC---------------CceEEecccCCcccCC-CCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHH
Confidence 578899999997 67 9999999988776654 358899999999998876655555556777788
Q ss_pred HHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHH
Q 040324 149 NELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQI 228 (488)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~ 228 (488)
.++++.++++++.++.+++++|++++..++.+++++|+.|+++.++|+++...++..|.++..++..|++++++.+++..
T Consensus 64 ~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~ 143 (360)
T TIGR00858 64 EELEEELAEWKGTEAALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERLLEKNR 143 (360)
T ss_pred HHHHHHHHHHhCCCCEEEECchHHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecCCCHHHHHHHHHHcc
Confidence 99999999999988999999999998777788889999999999999999999999999999998889999999887521
Q ss_pred hcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcc
Q 040324 229 AEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGT 308 (488)
Q Consensus 229 ~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t 308 (488)
..++.+|+++++++++|.+.++++|.++|+++|+++|+||+|+.|.++..+.+...++++++++.||+++|
T Consensus 144 ---------~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s 214 (360)
T TIGR00858 144 ---------GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGT 214 (360)
T ss_pred ---------cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEe
Confidence 01357888899999999999999999999999999999999997777766666566677777788999999
Q ss_pred cccccCCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 309 FSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 309 ~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
|||++|+.|||+++++++++.+......+.++.+.++..++++.++++.+. ..+++.++++++.+++.+.|+++
T Consensus 215 ~sK~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 215 LSKALGSYGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQ------EEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred chhhhhccCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh------hCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999888999999999988865544444444467777778888888763 23567889999999999999998
Q ss_pred CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 389 GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
++.+. +..++++++.+.......++.++|+++||.+.+..++..+.+.+++|++++..+|++|+++++++|+
T Consensus 289 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 289 GFTLM-PSCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCccC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 87765 3456788887755445678999999999999875544434445789999999999999999999873
No 36
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-42 Score=349.65 Aligned_cols=351 Identities=14% Similarity=0.123 Sum_probs=268.0
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
|..+.+++|+++||.| |++||||.| .....+||+||++.+|+++|+++....... ....++
T Consensus 33 p~~i~~a~G~~l~D~d---------------G~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~---~~~~~~ 94 (461)
T PRK07482 33 GRIVEGGEGIRITDAQ---------------GRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY---VGHGTE 94 (461)
T ss_pred CeeEEeeeeeEEEECC---------------CCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc---cccCCH
Confidence 5678999999999999 999999954 466789999999999999999986322211 112456
Q ss_pred hHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe-------
Q 040324 147 LHNELEECVARFVG--KPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT------- 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (488)
...+|.++|++..+ .+++++.+||++|++.+++.. +++..+|.+...||+.+..+..+++..
T Consensus 95 ~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~ 174 (461)
T PRK07482 95 ASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFD 174 (461)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccC
Confidence 77899999999885 367899999999998776654 235566777888999877665554311
Q ss_pred -----EEEe--eC--C--------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHH
Q 040324 209 -----IRVF--QH--N--------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPE 261 (488)
Q Consensus 209 -----v~~~--~~--~--------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~ 261 (488)
+..+ +. + +++++++.+.+. .+...++||+||+++.+|.+.+ +++
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~iAAvi~EPvqg~gG~~~~~~~yl~~ 245 (461)
T PRK07482 175 LPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE---------GPDTIAAFIAEPVLGTGGIVPPPAGYWPA 245 (461)
T ss_pred CCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc---------CCCcEEEEEECCccCCCCCcCCCHHHHHH
Confidence 1111 11 1 245566655421 1247899999999999998764 999
Q ss_pred HHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh----
Q 040324 262 IITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN---- 333 (488)
Q Consensus 262 l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~---- 333 (488)
|+++|++||++||+|||++ +|||+|.+ +++++|+.| ||+ +++|++|++ -|++++++++++.+...
T Consensus 246 lr~lc~~~giLlI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~ 318 (461)
T PRK07482 246 IQAVLKKYDILLIADEVVT--GFGRLGSMFGSDHYGIEP---DLI--TVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEH 318 (461)
T ss_pred HHHHHHHhCCEEEEecccc--CCCcCcchhhHHhcCCCC---CEE--EEccccccCccccceeeecHHHHHHHhcccccC
Confidence 9999999999999999999 99999998 789999998 788 899999763 27888899998887632
Q ss_pred ---CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeC
Q 040324 334 ---CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVY 406 (488)
Q Consensus 334 ---~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~ 406 (488)
.+++||+ +||+.|++++++|+++ ..+++.+++++++++|+++|+++ ++.......+.++.+.+.
T Consensus 319 ~~~~h~~T~~--gnpl~~Aaa~a~L~~~-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~ 389 (461)
T PRK07482 319 GAIGHGWTYS--GHPICAAAALANLDIL-------ERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFV 389 (461)
T ss_pred CccccCCCCC--cCHHHHHHHHHHHHHH-------HhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEec
Confidence 2444555 9999999999999999 34568889999999999999764 222111223567777774
Q ss_pred Ccc-----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 407 NPA-----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 407 ~~~-----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
... ....++..|+++|+++.+. + ..+.+||.||+.+|++|||+++++++++++++
T Consensus 390 ~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-----~-~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 390 ADRDDRTPFDPALKIGPQVSAAALERGVIARAM-----P-HGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred cCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC-----C-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 211 1357889999999998631 1 13789999999999999999999999999875
No 37
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.3e-42 Score=346.26 Aligned_cols=343 Identities=14% Similarity=0.176 Sum_probs=266.3
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
..+..+.+++|+++||.| |++||||+| .....+||+||++.+|+++|+++....+. . ..
T Consensus 17 ~~~~~~~~~~G~~~~d~d---------------G~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~----~-~~ 76 (395)
T PRK03715 17 RPDIVFTHGKGSWLYDHN---------------GKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP----A-FY 76 (395)
T ss_pred CCCceEEeeecCEEEECC---------------CCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc----c-cc
Confidence 346678899999999999 999999965 34455777789999999999988543221 1 23
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc--------CCCcEEEEeCCCchHHHHHHHhcCCe--------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM--------GKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~--------~~~~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (488)
.+...+|.+.+++..+.+++++++||++||+.+++.+. ++.++|.++..+|+++..++..++..
T Consensus 77 ~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred CHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 45556777777766556789999999999987776653 45678888999999999888877643
Q ss_pred ----EEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccc
Q 040324 209 ----IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 209 ----v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s 280 (488)
+...+++|++++++.+.+ ..++||+||+++++|.+.+ +++|+++|++||+++|+||+|+
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~~-------------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t 223 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLITD-------------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT 223 (395)
T ss_pred CCCCceeeCCchHHHHHHHcCC-------------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 122345788888887753 5678999999999999887 9999999999999999999999
Q ss_pred ccccCCCCCC-cchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHH
Q 040324 281 IGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQV 357 (488)
Q Consensus 281 ~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~ 357 (488)
++||+|++ +.+++++.| ||+ |++|++|+ +.|++++++++.. +....++.||+ ++|+.|++++++|++
T Consensus 224 --G~GRtG~~~a~~~~gv~P---Di~--t~gK~lg~G~p~~av~~~~~i~~-~~~~~~~~T~~--g~pl~~aaala~L~~ 293 (395)
T PRK03715 224 --GCGRTGTLFAYELSGIEP---DIM--TLGKGIGGGVPLAALLAKAEVAV-FEAGDQGGTYN--GNPLMTAVGVAVISQ 293 (395)
T ss_pred --CCCCCcchhhHhhcCCCC---cee--eehhhhhCCcceEEEEEcccccc-ccCCCcCCCCC--CCHHHHHHHHHHHHH
Confidence 79999998 678999987 666 99999986 3488888888863 22223444555 899999999999999
Q ss_pred HhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHC---CceEEeecC
Q 040324 358 VIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ---NVAIVTVGF 430 (488)
Q Consensus 358 i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~v~~~~~ 430 (488)
++ .+++++++++++++|+++|+++ ++..+ ...+.++++.+.++ ....+.+.+.+. |+++...+
T Consensus 294 l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~-~~~~~~~~~~~~~~~Gi~~~~~~- 363 (395)
T PRK03715 294 LL-------APGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKD-IGPQIVEKARDMQPDGLLLNAPR- 363 (395)
T ss_pred HH-------hccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCc-hHHHHHHHHHhccCCCEEEeecC-
Confidence 93 3578899999999999999875 33211 13468888888653 223444445544 99986422
Q ss_pred CCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 431 PATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 431 ~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.+.+||+||+.+|++|||+++++|+++++++
T Consensus 364 ------~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 364 ------PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred ------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 2689999999999999999999999998764
No 38
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=8.8e-42 Score=347.18 Aligned_cols=349 Identities=14% Similarity=0.144 Sum_probs=265.9
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|..+.+++|+|+||.| |++||||.+ .....+||+||.+.+|+.+|++++..... ....+
T Consensus 28 ~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~----~~~~~ 88 (442)
T PRK13360 28 APRLLVAAKGMYYTTHD---------------GRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPA----FQMGH 88 (442)
T ss_pred CCceEEeeeeeEEEeCC---------------CCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCccc----CCcCC
Confidence 46778999999999999 999999954 45578999999999999999998644332 11245
Q ss_pred hhHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhccc---------CCCcEEEEeCCCchHHHHHHHhcCCe------
Q 040324 146 ALHNELEECVARFVG--KPAAIVFGMGYVTNSSILPVLM---------GKGSLIISDSLNHNSIVNGARGSGAT------ 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~~---------~~~~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (488)
+...+|.++|++.++ .+++++.+||++|++.+++... ++..+|.+...+|+.+..++..++..
T Consensus 89 ~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~ 168 (442)
T PRK13360 89 PKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAF 168 (442)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhcc
Confidence 667899999999875 3689999999999977665432 24456777888999887666554311
Q ss_pred ------EEEeeCC------------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hH
Q 040324 209 ------IRVFQHN------------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LP 260 (488)
Q Consensus 209 ------v~~~~~~------------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~ 260 (488)
+..++.. +.++|++.++.. .+.+.++||+||+++++|.+.| |+
T Consensus 169 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---------~~~~~aavivEpi~g~~G~~~~~~~fl~ 239 (442)
T PRK13360 169 GALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH---------DASTIAAVIVEPVAGSTGVLIPPKGYLQ 239 (442)
T ss_pred CCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc---------CCCcEEEEEEccccCCCCCccCCHHHHH
Confidence 1222222 134666666531 1247899999999999999987 99
Q ss_pred HHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh---
Q 040324 261 EIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN--- 333 (488)
Q Consensus 261 ~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~--- 333 (488)
+|+++|++||++||+||||+ +|||+|++ +++++|+.| ||+ |++|++|++ .|++++++++++.+...
T Consensus 240 ~lr~lc~~~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Div--t~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~ 312 (442)
T PRK13360 240 RLREICDKHGILLIFDEVIT--GFGRLGAPFAAQYFGVTP---DLL--TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEA 312 (442)
T ss_pred HHHHHHHHcCCEEEEechhh--CCCCCccchhhhhcCCCC---cee--eeeeccccCccceEEEEEcHHHHHHhhcCCcc
Confidence 99999999999999999999 99999987 678899988 777 999999753 37788999999887642
Q ss_pred ----CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCCC--CCCeEEEEeC
Q 040324 334 ----CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDN--DSPVMPIMVY 406 (488)
Q Consensus 334 ----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~--~~~~~~~~~~ 406 (488)
.++++|+ ++|+.|++++++|++++ .+++.+++++++++|++.|+++. .+.+.+. .+.+..+.+.
T Consensus 313 ~~~~~~~~T~~--g~pl~~aaa~a~L~~l~-------~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~ 383 (442)
T PRK13360 313 GIEFFHGYTYS--GHPLACAAALATLDLYE-------REGLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELA 383 (442)
T ss_pred ccccccCCCCC--CCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEe
Confidence 2444555 99999999999999984 34688899999999999998763 2222221 1233344442
Q ss_pred C-----cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 407 N-----PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 407 ~-----~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
. .....++.+.|+++||++.+. .+.+||+||+.+|++|||+++++|+++++++
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~Gvl~~~~--------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 384 PRDGKPGKRAYEVFLKCFEKGLMIRYT--------GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred cCCCCcchhHHHHHHHHHHCCcEEEec--------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 2 123457888999999999741 2689999999999999999999999998764
No 39
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.3e-42 Score=348.04 Aligned_cols=348 Identities=18% Similarity=0.199 Sum_probs=270.3
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|..+.+++|+++||.| |++||||.+ .....+||+||++.+|+++|++++...... .-.+
T Consensus 36 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~~~ 96 (453)
T PRK06943 36 PLLPVARGEGAWLYDRD---------------GRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA----GCTH 96 (453)
T ss_pred CCceEEecccCEEEeCC---------------CCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccc----ccCC
Confidence 35678999999999999 999999954 466789999999999999999986443321 1245
Q ss_pred hhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe------
Q 040324 146 ALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT------ 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (488)
+...+|.++|++..+. ++++|++||++|++.+++.. .++..+|.+...+|+.+..++.+++..
T Consensus 97 ~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~ 176 (453)
T PRK06943 97 EPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAY 176 (453)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhccc
Confidence 6678999999998874 47899999999998777654 245667778889999887776655421
Q ss_pred ------EEEeeCC-----------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-cCCCCCCCCC----hH
Q 040324 209 ------IRVFQHN-----------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-IYSMEGELCK----LP 260 (488)
Q Consensus 209 ------v~~~~~~-----------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v~s~~G~~~~----l~ 260 (488)
+..++.. +++++++.++.. +.+.++||+|| +++..|.+.+ |+
T Consensus 177 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~iAAviiEPvvqg~gG~~~~~~~yl~ 246 (453)
T PRK06943 177 DPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER----------AGKIAALIVEPLVQCAAGMAMHDPSYLR 246 (453)
T ss_pred ccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC----------CCceEEEEEeccccccCCcccCCHHHHH
Confidence 1122211 245666666531 24789999999 5999888663 99
Q ss_pred HHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh---
Q 040324 261 EIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN--- 333 (488)
Q Consensus 261 ~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~--- 333 (488)
+++++|++||++||+|||++ +|||+|.+ +++++|+.| ||+ +++|++|++ .|++++++++++.+...
T Consensus 247 ~lr~lc~~~gillI~DEV~T--G~GRtG~~fa~~~~gv~P---Div--t~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~ 319 (453)
T PRK06943 247 GLRALCDRYGVHLIADEIAV--GCGRTGTFFACEQAGVWP---DFL--CLSKGISGGYLPLSLVLSRDAIFAAFYDDDVT 319 (453)
T ss_pred HHHHHHHHcCCEEEeechhh--CCCCCcchhHHHhCCCCC---CeE--eeehhhccCcccceEEEEcHHHHHhhcccCcc
Confidence 99999999999999999999 99999987 788999998 787 999999753 38899999999888632
Q ss_pred ---CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecC--CCCCCeEEEEeCC
Q 040324 334 ---CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLG--DNDSPVMPIMVYN 407 (488)
Q Consensus 334 ---~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~ 407 (488)
.+++||+ +||+.|++++++|++++ .+++.+++++++++|+++|+++ ..+.+. ...+.++.+.+..
T Consensus 320 ~~~~~~~T~~--gnpl~~aaa~a~L~~i~-------~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~ 390 (453)
T PRK06943 320 RGFLHSHSYT--GNPLACRAALATLDLFA-------EDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVAL 390 (453)
T ss_pred CCccCCCCCC--CCHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEcc
Confidence 2444555 99999999999999993 4568899999999999999876 111111 1234667777752
Q ss_pred c-----chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 408 P-----AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 408 ~-----~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+ .....+.+.|+++||++.+.+ +.+||+||+.+|++|||+++++++++++++
T Consensus 391 ~~~~~~~~~~~i~~~~~~~Gll~~~~g--------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 391 DGDAARTFSRRFFEAALERELLLRPIG--------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CCCcchHHHHHHHHHHHHCCcEEEecC--------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1 124578899999999987421 579999999999999999999999999876
No 40
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=347.84 Aligned_cols=350 Identities=16% Similarity=0.092 Sum_probs=268.5
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
+..+.+++|+|+||.| |++||||. +.....+||+||++.+|+.+|+++...... .....++
T Consensus 29 ~~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~---~~~~~~~ 90 (459)
T PRK05965 29 VTVLASAKGATLTDAS---------------GHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATG---YFHFGSE 90 (459)
T ss_pred CceEEeeeEeEEEECC---------------CCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccc---ccccCCH
Confidence 5678999999999999 99999995 456788999999999999999998643221 1112356
Q ss_pred hHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe-------
Q 040324 147 LHNELEECVARFVG--KPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT------- 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (488)
...+|.++|++.++ .+++++.+||++|++.+++.. .++..+|.+...||+.+..+...++..
T Consensus 91 ~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~ 170 (459)
T PRK05965 91 PAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFD 170 (459)
T ss_pred HHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccC
Confidence 66799999999875 357888899999997766543 124556778888999887665554321
Q ss_pred -----EEEe--eC-------CCH--------HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHH
Q 040324 209 -----IRVF--QH-------NTP--------SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEI 262 (488)
Q Consensus 209 -----v~~~--~~-------~d~--------~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l 262 (488)
+..+ +. +|. +++++.+++. ++.+.++||+||+++.+|.+.+ |++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---------~~~~iAAvIvEPiqg~gG~~~p~~~yl~~l 241 (459)
T PRK05965 171 LPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL---------GADNVAAFFCEPIQGSGGVIVPPKGWLKAM 241 (459)
T ss_pred CCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc---------CCCceEEEEEeccccCCCCccCCHHHHHHH
Confidence 1122 11 232 4556655531 1247899999999999998764 9999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh-----
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN----- 333 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~----- 333 (488)
+++|++||++||+|||++ +|||+|.+ +++++|+.| ||+ +++|++|++ -|++++++++++.+...
T Consensus 242 r~lc~~~gillI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~ 314 (459)
T PRK05965 242 REACRELGILFVADEVIT--GFGRTGPLFACEAEGVVP---DLM--TVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAA 314 (459)
T ss_pred HHHHHHcCCEEEEechhc--cCccCchhhhHhhcCCCC---CeE--EechhhccCCcceeEEEEcHHHHHHHhccccccc
Confidence 999999999999999999 99999998 788999998 788 999999764 38899999999888632
Q ss_pred --CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCC--CCCCeEEEEeCCc
Q 040324 334 --CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGD--NDSPVMPIMVYNP 408 (488)
Q Consensus 334 --~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~~~~~~~~~ 408 (488)
.+++||+ +||+.|++++++|+++ +.+++.+++++++++|+++|+++. .+.+.+ ..+.++.+.+...
T Consensus 315 ~~~h~~T~~--gnpl~~Aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~ 385 (459)
T PRK05965 315 PVGHGYTYS--AHPVSAAVGLEVLRLY-------HEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVAD 385 (459)
T ss_pred cccccCCCC--CCHHHHHHHHHHHHHH-------HhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEecc
Confidence 3444555 9999999999999999 446788999999999999998862 222221 2345666666321
Q ss_pred -----------chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 409 -----------AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 409 -----------~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.....+.+.|+++|+++.+. +.+.+|++||+.+|++|||+++++++++++++
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~-------g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 386 KATKTPFDAALDPADRIFDRAYANGLVFRAF-------GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ccccCCCCchhHHHHHHHHHHHhCCeEEEec-------CCcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 12457888999999999742 24689999999999999999999999999886
No 41
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-42 Score=349.43 Aligned_cols=357 Identities=15% Similarity=0.185 Sum_probs=270.7
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||.+ .....+||+||++.+|+.+|++++.... .....
T Consensus 37 ~~p~~i~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~----~~~~~ 97 (443)
T PRK06058 37 TLPVYVARAGGGIVEDVD---------------GNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTC----FMVTP 97 (443)
T ss_pred CCCceEEeeeeeEEEeCC---------------CCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCcc----ccccC
Confidence 456788999999999999 999999954 4667899999999999999999853221 11134
Q ss_pred hhhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC-----------
Q 040324 145 LALHNELEECVARFVGK---PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA----------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~----------- 207 (488)
.+...++.++|++.++. +++++++||++|++.+++ .++++..+|.+...+|+.+..++.+++.
T Consensus 98 ~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~ 177 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPF 177 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCC
Confidence 56678999999998753 478999999999976665 5678877788888899998877765431
Q ss_pred --eEEEe----eCCCH--------HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHc
Q 040324 208 --TIRVF----QHNTP--------SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRY 269 (488)
Q Consensus 208 --~v~~~----~~~d~--------~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~ 269 (488)
.+..+ +.++. +.+++.++..... ..+.+.++||+||+++.+|.+.| |++|+++|++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~ 252 (443)
T PRK06058 178 APEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQ-----VGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCREN 252 (443)
T ss_pred CCCceEcCCCcccccccccccchHHHHHHHHHHHHHh-----hCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 11111 12221 2222222211000 00236899999999999998874 99999999999
Q ss_pred CcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHH
Q 040324 270 KAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPP 346 (488)
Q Consensus 270 g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~ 346 (488)
|++||+||||+ +|||+|.+ +.+++|+.| |++ +++|++|++ .|++++++++++.+....++++|+ +||+
T Consensus 253 gillI~DEV~t--GfgRtG~~fa~~~~gv~P---Div--~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~~--gnpl 323 (443)
T PRK06058 253 GVVFIADEVQT--GFARTGAWFACEHEGIVP---DLI--TTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTYG--GNPV 323 (443)
T ss_pred CCEEEEecccc--CCCcChhhhHHHhcCCCC---CEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCCCCC--CCHH
Confidence 99999999999 99999987 678899988 777 899999852 289999999999887666666666 9999
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeec--CCCCCCeEEEEeCCc-------chHHHHH
Q 040324 347 AAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVL--GDNDSPVMPIMVYNP-------AKVSSFS 415 (488)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~~~~~~~~~~~~-------~~~~~~~ 415 (488)
.|++++++|+++. .+++.+++++++++|+++|+++ ..++. ....+.++.+.+..+ .....+.
T Consensus 324 ~~aaa~a~L~~~~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~ 396 (443)
T PRK06058 324 ACAAALAAIETIE-------EDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALA 396 (443)
T ss_pred HHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHH
Confidence 9999999999983 3568889999999999999875 12221 123356666666332 2345788
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.|+++||++.+. .+. .+++||.||+.+|++|||+++++|+++++++
T Consensus 397 ~~~~~~Gv~~~~~----~~~-~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 397 AAAHAAGVIVLTC----GTY-GNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHCCeEEecc----CCC-CCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 8899999999842 211 2689999999999999999999999998653
No 42
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=3.3e-42 Score=348.17 Aligned_cols=345 Identities=13% Similarity=0.115 Sum_probs=268.0
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhh
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLAL 147 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (488)
.++.+++|+++||.| |++||||.+ .....+||+||++.+|+++|+++....... ...++.
T Consensus 27 ~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~~~~~ 87 (428)
T PRK07986 27 YPVVSAEGCELILAD---------------GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG----GITHPP 87 (428)
T ss_pred eeEEeeeeeEEEeCC---------------CCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc----ccCCHH
Confidence 578999999999999 999999954 455778999999999999999986433211 114566
Q ss_pred HHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc--------cCCCcEEEEeCCCchHHHHHHHhcCCe---------
Q 040324 148 HNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL--------MGKGSLIISDSLNHNSIVNGARGSGAT--------- 208 (488)
Q Consensus 148 ~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~--------~~~~~~Vl~~~~~h~~~~~~~~~~g~~--------- 208 (488)
..+|.++|++..+. +++++.+||++|++.+++.. .++..+|.+...+|+.+..++..++..
T Consensus 88 ~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 167 (428)
T PRK07986 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKG 167 (428)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCC
Confidence 78999999998864 57899999999997766543 245667888888999887666554321
Q ss_pred ----EEEe-----------eCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc-CCCCCCCC----ChHHHHHHHHH
Q 040324 209 ----IRVF-----------QHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI-YSMEGELC----KLPEIITICKR 268 (488)
Q Consensus 209 ----v~~~-----------~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v-~s~~G~~~----~l~~l~~l~~~ 268 (488)
+..+ .++|++++++.++.. +...++||+||+ ++.+|.+. +|++|+++|++
T Consensus 168 ~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~----------~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~ 237 (428)
T PRK07986 168 YLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH----------RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDR 237 (428)
T ss_pred CCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC----------CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHH
Confidence 1111 134667777777542 236889999997 55556543 39999999999
Q ss_pred cCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhhC-----CCCcc
Q 040324 269 YKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYNC-----PAHLY 339 (488)
Q Consensus 269 ~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~~-----~~~~~ 339 (488)
||++||+||||+ ++||+|++ +++++|++| ||+ |++|++|++ .|++++++++++.+.... ++++|
T Consensus 238 ~g~lLI~DEv~t--G~GrtG~~fa~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~ 310 (428)
T PRK07986 238 EGILLIADEIAT--GFGRTGKLFACEHAGIAP---DIL--CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTF 310 (428)
T ss_pred cCCEEEEecccc--CCccCCCeeeecccCCCC---CEE--EechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCC
Confidence 999999999998 89999998 788999988 777 899999642 277788999999987532 45566
Q ss_pred cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC--CCCCeEEEEeCCcchHHHHHH
Q 040324 340 ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD--NDSPVMPIMVYNPAKVSSFSR 416 (488)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 416 (488)
+ +||+.|++++++|++++ .+++++++++++++|++.|+++ ..+.+.+ ..+.++.+.+..+.....+.+
T Consensus 311 ~--g~p~~~aaa~a~L~~i~-------~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~~ 381 (428)
T PRK07986 311 M--GNPLACAVANASLSLLE-------SGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPVNMAALQR 381 (428)
T ss_pred C--cCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcccHHHHHH
Confidence 5 99999999999999984 3467899999999999999876 2222221 235777787766555678999
Q ss_pred HHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 417 ECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 417 ~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.|+++|+++.+. + +.+||+||+.+|++||++++++|++++++
T Consensus 382 ~l~~~Gl~~~~~-------g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 382 FFVEQGVWIRPF-------G-KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHCCcEEEec-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 999999998742 1 68999999999999999999999999865
No 43
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-42 Score=323.00 Aligned_cols=349 Identities=17% Similarity=0.177 Sum_probs=275.2
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.-|..|.+++|.|++|.+ |++|||+.+ -....+||+||++.+++.+|+.++-+.++ .+ .
T Consensus 31 ~~Pl~Iv~~~~~ylyDe~---------------G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~----~~-~ 90 (442)
T KOG1404|consen 31 KKPLVIVRGEGQYLYDEE---------------GRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTS----GY-L 90 (442)
T ss_pred cCCceEEecceEEEEcCC---------------CceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeec----cc-c
Confidence 446678999999999998 999999854 45678999999999999999977644442 11 3
Q ss_pred hhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhh---hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----
Q 040324 145 LALHNELEECVARFVGKP--AAIVFGMGYVTNSS---ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---- 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~---~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~---- 215 (488)
++...+++++|++.+..+ .++|++||+|||++ +++.+++.-++|...+.+|+++..++.+++......+..
T Consensus 91 ~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~ 170 (442)
T KOG1404|consen 91 NPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVAS 170 (442)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCC
Confidence 455678888888887653 68889999999954 455668888999999999999998888876554332110
Q ss_pred -----------------C-----HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHc
Q 040324 216 -----------------T-----PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRY 269 (488)
Q Consensus 216 -----------------d-----~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~ 269 (488)
+ .+.+.+.+++.+..+. +.+.+++|.|+|++.+|.+.+ |+++.++|+++
T Consensus 171 ~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~-----~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~ 245 (442)
T KOG1404|consen 171 GVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDG-----PETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR 245 (442)
T ss_pred cccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcC-----CCceeEEEeehhccCCccccCCchHHHHHHHHHHHc
Confidence 1 2233333333333222 347999999999999998874 99999999999
Q ss_pred CcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhC-CCCcccCCCCH
Q 040324 270 KAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNC-PAHLYATSISP 345 (488)
Q Consensus 270 g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~-~~~~~~~~~~p 345 (488)
|.++|.||||+ +|||+|.+ .++..|+.| ||+ |++|++|++- |+++.++++++.+.+.. +.+||+ +||
T Consensus 246 Ggl~IaDEVqt--GfGRtG~~wgfe~h~v~P---DIv--TmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyg--gnP 316 (442)
T KOG1404|consen 246 GGLFIADEVQT--GFGRTGHMWGFESHGVVP---DIV--TMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYG--GNP 316 (442)
T ss_pred CCEEEehhhhh--ccccccccccccccCCCc---cHH--HHHhhccCCCcceeeecCHHHHHHHHhccccccccC--CCc
Confidence 99999999999 99999977 678889988 677 9999998733 99999999999998877 766777 999
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCCCCC--CeEEEEeCCcc---------hHH
Q 040324 346 PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGDNDS--PVMPIMVYNPA---------KVS 412 (488)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~--~~~~~~~~~~~---------~~~ 412 (488)
++|++++++|+++ ..+++.++.++.+.+|+++|.++ +.+++++..+ .++.+.+-... ...
T Consensus 317 ~a~avg~aVL~Vi-------kee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~ 389 (442)
T KOG1404|consen 317 VACAVGLAVLKVI-------KEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGA 389 (442)
T ss_pred hhHHHHHHHHHHH-------HHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHH
Confidence 9999999999999 56889999999999999999887 5566665544 56666653221 234
Q ss_pred HHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHH
Q 040324 413 SFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVI 460 (488)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (488)
.+.+.|.++|+++...+. . .+++||+||+++|+||+|.+++..
T Consensus 390 ~i~~~cke~Gvlvg~g~i----~-G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 390 VIGEQCKELGVLVGKGGI----H-GNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHhCeeeecccc----c-ceEEEecCCeeccHHHHHHHHHHH
Confidence 788899999999964332 2 359999999999999998888866
No 44
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-41 Score=346.76 Aligned_cols=350 Identities=15% Similarity=0.203 Sum_probs=270.1
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.++..+.+++|+++||.| |++||||+++++.++||+||++.+|+.+|++++.... ++ -.+
T Consensus 53 ~~~~~i~~a~G~~l~D~d---------------G~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~--~~---~~~ 112 (459)
T PRK06082 53 PCLDVLASAEGIYIEDVD---------------GKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP--RR---FTN 112 (459)
T ss_pred CCCceEEeeeeeEEEECC---------------CCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc--Cc---cCC
Confidence 446788999999999999 9999999877888999999999999999999875432 11 235
Q ss_pred hhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCCeE-----------
Q 040324 146 ALHNELEECVARFVGK--PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGATI----------- 209 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v----------- 209 (488)
+...+|+++|+++++. +++++.+||++|++.+++ .++++..+|.+...+|+.+..++.+++...
T Consensus 113 ~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~ 192 (459)
T PRK06082 113 ETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAG 192 (459)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCC
Confidence 7778999999999864 578999999999976554 446777888889999999987776664321
Q ss_pred -EEee--------CCC--------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHc
Q 040324 210 -RVFQ--------HNT--------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRY 269 (488)
Q Consensus 210 -~~~~--------~~d--------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~ 269 (488)
..++ .++ ++++++.+++ ....++||+|||+++++.+++ |++|+++|++|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-----------~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~ 261 (459)
T PRK06082 193 VERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK-----------EGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKH 261 (459)
T ss_pred CEEeCCCcccccccCChhHHHHHHHHHHHHHHhc-----------CCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHc
Confidence 1121 222 2345555542 126889999999998655555 99999999999
Q ss_pred CcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCH
Q 040324 270 KAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISP 345 (488)
Q Consensus 270 g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p 345 (488)
|++||+||||+ +|||+|.+ +++++|+.| ||+ +++|++|+++ |++++++++++.+.. ...+ ++.++||
T Consensus 262 g~llI~DEV~t--G~GRtG~~fa~e~~gv~P---Div--~~gKgl~gG~~P~~av~~~~~i~~~~~~-~~~~-~T~~gnp 332 (459)
T PRK06082 262 NVLLIIDEIPN--GMGRTGEWFTHQAYGIEP---DIL--CIGKGLGGGLVPIAAMITKDKYNTAAQI-SLGH-YTHEKSP 332 (459)
T ss_pred CCEEEEechhh--CCCccchhhHhHhhCCCC---CEE--EecccccCCCCcceEEEEcHHHHhhccC-CCCC-CCCCcCH
Confidence 99999999999 99999998 778999998 777 7999998642 888888888755431 1111 3445999
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecC--CCCCCeEEEEeCCc--------chHHH
Q 040324 346 PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMVYNP--------AKVSS 413 (488)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~--------~~~~~ 413 (488)
+.|++++++|++++ .+++.+++++++++|+++|+++ ..++.. ...+.++.+.+..+ .....
T Consensus 333 l~~aaa~a~L~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~ 405 (459)
T PRK06082 333 LGCAAALATIEVIE-------QEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEA 405 (459)
T ss_pred HHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHH
Confidence 99999999999983 3468899999999999999875 222222 22356777777421 12457
Q ss_pred HHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 414 FSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
+...|+++|+++.+. +.+.+||+||+.+|++|||++++++++++.++..
T Consensus 406 ~~~~~~~~Gvl~~~~-------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 406 VLYRCLNNGLSFKVS-------QGNVIQLSPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred HHHHHHhCCCEEEec-------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 888899999998742 2378999999999999999999999999988743
No 45
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=1.2e-41 Score=349.53 Aligned_cols=354 Identities=15% Similarity=0.157 Sum_probs=277.0
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
++|..+.+++|+|+||.| |++||||+| +..+.+||+||++.+|+++|++++..... . -.
T Consensus 56 ~~p~~~~~a~G~~l~d~d---------------G~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~--~---~~ 115 (474)
T PLN02624 56 PIPVVFSRAKGSRIWDPE---------------GKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR--A---FY 115 (474)
T ss_pred CCCceEEeeeeCEEEECC---------------CCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc--c---cC
Confidence 446778999999999999 999999965 45567899999999999999999754331 1 23
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccC-----------CCcEEEEeCCCchHHHHHHHhcCC------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMG-----------KGSLIISDSLNHNSIVNGARGSGA------ 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~-----------~~~~Vl~~~~~h~~~~~~~~~~g~------ 207 (488)
.+...+|+++|+++++.+++++++||++||+.+++.... +..+|.+...+|+.+...+.+++.
T Consensus 116 ~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 195 (474)
T PLN02624 116 NDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRG 195 (474)
T ss_pred CHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcccccc
Confidence 567789999999999988999999999999776653321 223556667788887776655431
Q ss_pred ------eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 040324 208 ------TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 208 ------~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE 277 (488)
.+..++++|++.+++.++.. +...++|++|++++++|.+.| |++|+++|++||++||+||
T Consensus 196 ~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DE 265 (474)
T PLN02624 196 FGPLLPGHLKVDFGDLDALEKIFEED----------GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADE 265 (474)
T ss_pred CCCCCCCceEeCCCCHHHHHHHHHhC----------CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 24567888999999988642 236889999999999998887 9999999999999999999
Q ss_pred cccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHH
Q 040324 278 AHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 278 ~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a 353 (488)
+|+ ++|++|.+ ..+++++.| |++ ++||++|+++ |++++++++++.+....++.+++ ++|+.++++.+
T Consensus 266 v~t--G~GrtG~~~a~~~~~i~p---Div--~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~--g~pl~~aaa~a 336 (474)
T PLN02624 266 IQT--GLARTGKMLACDWEEVRP---DVV--ILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFG--GNPLASAVAMA 336 (474)
T ss_pred ccc--CcCcCcchhhHHhcCCCC---CEE--EecccccCCCCcceeeeecHHHHhHhccCCcCCCCC--CCHHHHHHHHH
Confidence 998 79999987 556678876 666 7999998754 88899999988876555555555 89999999999
Q ss_pred HHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Ce-ecC--CCCCCeEEEEeCCc----chHHHHHHHHHHCCce
Q 040324 354 AIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FE-VLG--DNDSPVMPIMVYNP----AKVSSFSRECLKQNVA 424 (488)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~--~~~~~~~~~~~~~~----~~~~~~~~~l~~~Gi~ 424 (488)
+|+.+. .+++.+++.++.++|++.|+++. ++ ... ...+.++++.+..+ ....++++.|+++||+
T Consensus 337 aLe~l~-------~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~ 409 (474)
T PLN02624 337 ALQVVQ-------DEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLL 409 (474)
T ss_pred HHHHHH-------hchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeE
Confidence 999883 34577788888888988887752 21 111 12356667666542 3456899999999999
Q ss_pred EEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccC
Q 040324 425 IVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYF 472 (488)
Q Consensus 425 v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~ 472 (488)
+.+. +.+++||+||+.+|++||++++++|+++++.-..+..
T Consensus 410 v~p~-------~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~ 450 (474)
T PLN02624 410 AKPT-------HDTIIRLAPPLSISEDELQECSKALSDVLEHDLPKLQ 450 (474)
T ss_pred EecC-------CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9842 2478999999999999999999999999877555543
No 46
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.5e-41 Score=343.76 Aligned_cols=345 Identities=14% Similarity=0.149 Sum_probs=268.7
Q ss_pred CccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhH
Q 040324 70 PLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALH 148 (488)
Q Consensus 70 ~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (488)
++.+++|+|+||.| |++||||.| .....+||+||++.+|+++|++++..... ..-.++..
T Consensus 29 ~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~~~~~~~~ 89 (429)
T PRK06173 29 PVERADGVMITLKD---------------GRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF----GGFTHEPA 89 (429)
T ss_pred eEEeceeeEEEcCC---------------CCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc----cccCCHHH
Confidence 48899999999999 999999955 45678899999999999999999643221 11245677
Q ss_pred HHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhccc---------CCCcEEEEeCCCchHHHHHHHhcCCe---------
Q 040324 149 NELEECVARFVG--KPAAIVFGMGYVTNSSILPVLM---------GKGSLIISDSLNHNSIVNGARGSGAT--------- 208 (488)
Q Consensus 149 ~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~~---------~~~~~Vl~~~~~h~~~~~~~~~~g~~--------- 208 (488)
.+|.++|++.++ .+++++.+||++|++.+++... ++..+|.....+|+.+..++..++..
T Consensus 90 ~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~ 169 (429)
T PRK06173 90 VELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNH 169 (429)
T ss_pred HHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccc
Confidence 899999999875 3679999999999977665432 35567778888999877665543311
Q ss_pred ----EEEeeCC-----------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc-CCCCCCCCC----hHHHHHHHHH
Q 040324 209 ----IRVFQHN-----------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI-YSMEGELCK----LPEIITICKR 268 (488)
Q Consensus 209 ----v~~~~~~-----------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v-~s~~G~~~~----l~~l~~l~~~ 268 (488)
+..++.. +++.|++.++.. +.+.++||+||+ ++.+|.+.+ +++++++|++
T Consensus 170 ~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~----------~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~ 239 (429)
T PRK06173 170 SLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQK----------GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQ 239 (429)
T ss_pred cCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhC----------CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHH
Confidence 1122211 345556666431 237899999997 999887753 9999999999
Q ss_pred cCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh-----CCCCcc
Q 040324 269 YKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN-----CPAHLY 339 (488)
Q Consensus 269 ~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~-----~~~~~~ 339 (488)
||++||+||||+ ++||+|++ .++++|+.| ||+ +|+|++|++ .+.++.++++++.+... .++.|+
T Consensus 240 ~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Div--~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~ 312 (429)
T PRK06173 240 YGVLLIFDEIAT--GFGRTGKLFALEHAGVVP---DIM--CIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTF 312 (429)
T ss_pred cCCeEEecchhc--CCCcCCcchHHHhcCCCC---CEE--EeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCC
Confidence 999999999997 79999998 688999988 777 799999642 37888999999988642 233344
Q ss_pred cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC--CCCCeEEEEeCCcchHHHHHH
Q 040324 340 ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD--NDSPVMPIMVYNPAKVSSFSR 416 (488)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 416 (488)
+ ++|+.|++++++|++++ .+++++++++++++|++.|+++ +++.+.+ ..++++++.+..+.....+.+
T Consensus 313 ~--g~p~~~aaa~a~l~~i~-------~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~ 383 (429)
T PRK06173 313 M--ANPLACAIAAESIRLLL-------ESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQP 383 (429)
T ss_pred C--cCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHH
Confidence 4 89999999999999984 3457889999999999999865 4443322 346888898877656678999
Q ss_pred HHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 417 ECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 417 ~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.|+++||++.+.+ +.+||.||+.+|++|+|+++++|++++.++
T Consensus 384 ~l~e~Gi~v~~~g--------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 384 RFVEHGIWVRPFG--------KLVYIMPPFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred HHHHCCeEEEecC--------CEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 9999999997421 689999999999999999999999999765
No 47
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-41 Score=344.44 Aligned_cols=354 Identities=14% Similarity=0.137 Sum_probs=267.7
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||. +...+.+||+||++.+|+++|+++....... ...
T Consensus 44 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~~ 104 (464)
T PRK06938 44 RIPLALKRARGIYVEDVE---------------GRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL----DLT 104 (464)
T ss_pred CCCceEEeccccEEEeCC---------------CCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc----ccC
Confidence 456778999999999999 99999994 4567889999999999999999763221110 124
Q ss_pred hhhHHHHHHHHHHHhCCC-----CeEEe-CCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC--------
Q 040324 145 LALHNELEECVARFVGKP-----AAIVF-GMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA-------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~-----~~i~~-~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (488)
++...+|.++|++.++.+ +++++ +||++|++.+++ ..+++..+|.+...+|+.+..++.+++.
T Consensus 105 ~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~ 184 (464)
T PRK06938 105 TPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLG 184 (464)
T ss_pred CHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCC
Confidence 566778899998877532 45566 699999976555 4567778888889999998877765431
Q ss_pred ----eEEEeeC--C---------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHH
Q 040324 208 ----TIRVFQH--N---------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEI 262 (488)
Q Consensus 208 ----~v~~~~~--~---------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l 262 (488)
.+..++. + +.+.+++.+++.. .++...++||+|||++..|.++| |+++
T Consensus 185 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-------~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l 257 (464)
T PRK06938 185 ALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPE-------SGVVLPAAVILEVVQGEGGVIPAPIEWLRGL 257 (464)
T ss_pred CCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhc-------cCCCceEEEEEccccCCCCCcCCCHHHHHHH
Confidence 1222222 2 1455666664311 01236899999999999998764 9999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcc
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLY 339 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~ 339 (488)
+++|++||++||+|||++ +|||+|.+ +++++|+.| ||+ +++|++|++. |++++++++ +.+....++.||
T Consensus 258 r~lc~~~giLlI~DEV~t--GfGRtG~~~a~e~~gv~P---Div--~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~ 329 (464)
T PRK06938 258 RRITEEAGIPLIVDEIQS--GFGRTGKMFAFEHAGIIP---DVV--VLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTF 329 (464)
T ss_pred HHHHHHcCCEEEEecccc--CCCcCcHHHHHHhcCCCC---CEE--EeeccccCCCceEEEeehhHh-hccCCCCCCCCC
Confidence 999999999999999999 99999987 788999998 787 8999997532 788888774 655444455566
Q ss_pred cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCC--CCCCeEEEEeCCc-------
Q 040324 340 ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGD--NDSPVMPIMVYNP------- 408 (488)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~~------- 408 (488)
+ +||+.|++++++|+++ +.+++.+++++++++|+++|+++ ..+++.+ ..+.++.+.+..+
T Consensus 330 ~--gnpla~Aaa~a~L~~l-------~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~ 400 (464)
T PRK06938 330 R--GNQMAMAAGSATLRYI-------KEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDAL 400 (464)
T ss_pred C--cCHHHHHHHHHHHHHH-------HHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCccccccc
Confidence 5 9999999999999998 44678899999999999999875 2222222 2346677776422
Q ss_pred -------chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 409 -------AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 409 -------~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.....+.+.|+++|+++.+. .. ..+.+||.||+.+|++|+|++++++++++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~Gll~~~~----g~-~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 401 GHPPANGELASLIQRECLRRGLILELG----GR-HGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred ccCCccHHHHHHHHHHHHHCCeEEeec----CC-CCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 12356888999999998742 11 13789999999999999999999999999775
No 48
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=3.4e-41 Score=341.94 Aligned_cols=346 Identities=17% Similarity=0.194 Sum_probs=274.2
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
++|..+.+++|++++|.| |++||||+|+ ..+.+||+||++.+|+.+++++++... +. ..
T Consensus 18 ~~~~~~~~~~g~~~~~~~---------------g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~---~~--~~ 77 (401)
T TIGR01885 18 PLPVVFSKAEGVHVWDVE---------------GKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSS---RA--FY 77 (401)
T ss_pred CCCceEEeeecCEEEeCC---------------CCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccc---cc--cC
Confidence 456677899999999999 9999999763 335688899999999999999875332 11 14
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc----------cCCCcEEEEeC-CCchHHHHHHHhcC-------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL----------MGKGSLIISDS-LNHNSIVNGARGSG------- 206 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~----------~~~~~~Vl~~~-~~h~~~~~~~~~~g------- 206 (488)
.+.+.+++++|+++++.+++++++||++||+.+++.+ ...++.|+++. .+|+++..++.+++
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (401)
T TIGR01885 78 NDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTN 157 (401)
T ss_pred CHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccc
Confidence 6778999999999999889999999999998877764 12245555554 55777777777653
Q ss_pred -----CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 040324 207 -----ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 207 -----~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE 277 (488)
..+..++++|+++|++.+++. +...++|++|++++++|.+.+ |++|+++|++||+++|+||
T Consensus 158 ~~~~~~~~~~~~~~d~~~le~~l~~~----------~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DE 227 (401)
T TIGR01885 158 FGPYVPGFKKIPYNNLEALEEALEDH----------GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADE 227 (401)
T ss_pred cCCCCCCceEeCCCCHHHHHHHHHhc----------CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 235678899999999988752 135788889999999999887 9999999999999999999
Q ss_pred cccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHH
Q 040324 278 AHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 278 ~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a 353 (488)
+|+ ++|++|++ ..+++++.| |++ +++|++++++ |++++++++++.+....+.++++ ++|+.++++.+
T Consensus 228 v~~--g~g~~G~~~~~~~~~~~~---di~--~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~--~~p~~~~aa~a 298 (401)
T TIGR01885 228 IQT--GLGRTGKLLCVDHENVKP---DIV--LLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYG--GNPLACAVAVA 298 (401)
T ss_pred hhh--CCCccchhhHHhhcCCCC---CEE--EeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHH
Confidence 998 79999987 445667766 666 7899998644 78999999999887544444555 78999999999
Q ss_pred HHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC--CCCCCeEEEEeCCcc---hHHHHHHHHHHCCceEEee
Q 040324 354 AIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG--DNDSPVMPIMVYNPA---KVSSFSRECLKQNVAIVTV 428 (488)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~l~~~Gi~v~~~ 428 (488)
+|+.+. .+.+.+++++++++|++.|++++.++.. ...+.+..+.+..+. ...+++++|.++||.+.+.
T Consensus 299 ~L~~i~-------~~~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~ 371 (401)
T TIGR01885 299 ALEVLE-------EEKLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPT 371 (401)
T ss_pred HHHHHH-------hccHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEec
Confidence 999984 2356678888999999999998644322 224566676665442 5678999999999999742
Q ss_pred cCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 429 GFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 429 ~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+.+.+||+|++.+|++||++++++|++++
T Consensus 372 -------~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 372 -------HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred -------CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 24789999999999999999999998875
No 49
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.7e-41 Score=344.01 Aligned_cols=349 Identities=17% Similarity=0.199 Sum_probs=270.7
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
++|..+.+++|+++||.| |++||||. +.....+||+||++.+|+++|+++....... .-.
T Consensus 23 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~ 83 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLAD---------------GRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFA----GFT 83 (423)
T ss_pred CCCeeEEeccccEEEeCC---------------CCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccc----ccC
Confidence 356778999999999999 99999995 4466789999999999999999986432210 113
Q ss_pred hhhHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCC------
Q 040324 145 LALHNELEECVARFVG--KPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGA------ 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~------ 207 (488)
++...+|.++|++.++ .+++++++||++|++.+++.. +++..+|.+...+|+.+...+..++.
T Consensus 84 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 163 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHAL 163 (423)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccc
Confidence 5666889999999885 468999999999997766643 35667788888999988766654321
Q ss_pred --------eEEEeeCCC-----HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-cCCCCCCCCC----hHHHHHHHHHc
Q 040324 208 --------TIRVFQHNT-----PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-IYSMEGELCK----LPEIITICKRY 269 (488)
Q Consensus 208 --------~v~~~~~~d-----~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v~s~~G~~~~----l~~l~~l~~~~ 269 (488)
..+.++++| ++++++.+.+. +...++||+|| +++.+|...+ |++|+++|++|
T Consensus 164 ~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~----------~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~ 233 (423)
T PRK05964 164 YTPLLFEQVTAPFPPDGYEQATLDALEALLEKH----------AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH 233 (423)
T ss_pred ccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC----------CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc
Confidence 233445556 77777777642 23688999999 5777787664 99999999999
Q ss_pred CcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh------CCCCcc
Q 040324 270 KAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN------CPAHLY 339 (488)
Q Consensus 270 g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~------~~~~~~ 339 (488)
|++||+||+|+ ++|++|.+ +.+++++.| |++ +++|+++++ .|++++++++++.+... .++.+|
T Consensus 234 g~llI~DEv~t--g~gr~G~~~a~~~~~v~p---Di~--~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~ 306 (423)
T PRK05964 234 GVLLIFDEIAT--GFGRTGTLFACEQAGVSP---DIM--CLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSY 306 (423)
T ss_pred CCEEEEechhh--CCCcCcchhHHHhcCCCC---Cee--eeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCC
Confidence 99999999998 89999987 668889887 676 899999654 28899999999988532 122333
Q ss_pred cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecC--CCCCCeEEEEeCCcc---hHHH
Q 040324 340 ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLG--DNDSPVMPIMVYNPA---KVSS 413 (488)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~---~~~~ 413 (488)
+++|+.+++++++|+++. .+++.+++.++++++++.|+++ ..+... ...+.++.+.+.... ....
T Consensus 307 --~~np~~~aaa~a~l~~l~-------~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~ 377 (423)
T PRK05964 307 --TANPLACAAANASLDLFE-------DEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPA 377 (423)
T ss_pred --CcCHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHH
Confidence 489999999999999983 3467889999999999999876 333222 123566677775443 3668
Q ss_pred HHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 414 FSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.+.|.++||++.+.+ +.+||+|++.+|++|||+++++++++++++
T Consensus 378 l~~~l~~~Gv~v~~~~--------~~lR~~p~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 378 LRAFALERGVLLRPLG--------NTIYLMPPYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHCCeEEEecC--------CEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence 9999999999998521 579999999999999999999999998764
No 50
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=3.6e-41 Score=342.97 Aligned_cols=350 Identities=17% Similarity=0.189 Sum_probs=266.9
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
..|..+.+++|+++||.| |++||||.| .....+||+||++.+|+++|++++...+. .. -.
T Consensus 30 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~---~~-~~ 90 (445)
T PRK09221 30 AAPRLLVSAEGMYYTDAD---------------GRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA---FQ-MG 90 (445)
T ss_pred CCCceEEeccccEEEeCC---------------CCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc---cc-cC
Confidence 346778999999999999 999999954 45678999999999999999998643332 11 23
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhccc---------CCCcEEEEeCCCchHHHHHHHhcCCe-----
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVLM---------GKGSLIISDSLNHNSIVNGARGSGAT----- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~~---------~~~~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (488)
++...+|.++|++.++. +++++.+||++|++.+++... ++..+|.+...+|+.+..++..++..
T Consensus 91 ~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~ 170 (445)
T PRK09221 91 HPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKM 170 (445)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhc
Confidence 56668899999998753 689999999999977665432 24456777888999887766554321
Q ss_pred -------EEEeeCCC------------------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----h
Q 040324 209 -------IRVFQHNT------------------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----L 259 (488)
Q Consensus 209 -------v~~~~~~d------------------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l 259 (488)
+..++..+ .+++++.++.. .+.+.++||+|||++++|.+.| |
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---------~~~~iAavi~Epv~g~~G~~~~~~~yl 241 (445)
T PRK09221 171 FGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH---------DASTIAAVIVEPMAGSAGVLVPPKGYL 241 (445)
T ss_pred cCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc---------CCCcEEEEEEecccCCCCcccCCHHHH
Confidence 11222211 24566665531 1247899999999999999887 9
Q ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh--
Q 040324 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN-- 333 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~-- 333 (488)
++|+++|++||++||+||||+ +|||+|.+ .+++++++| ||+ +++|+++++ .|++++++++++.+...
T Consensus 242 ~~l~~lc~~~g~llI~DEV~t--G~GRtG~~~~~~~~gv~P---Di~--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~ 314 (445)
T PRK09221 242 QRLREICDKHGILLIFDEVIT--GFGRLGAAFAAERFGVTP---DII--TFAKGLTNGAIPMGAVIASDEIYDAFMQGPE 314 (445)
T ss_pred HHHHHHHHHcCCEEEEeehhh--CCCcCchhhHHHhcCCCC---CEE--EeccccccCcccceeeEEcHHHHHhhccCcc
Confidence 999999999999999999999 89999998 688999988 776 999999753 48889999999887531
Q ss_pred -----CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCC--CCCeEEEEe
Q 040324 334 -----CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDN--DSPVMPIMV 405 (488)
Q Consensus 334 -----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~~ 405 (488)
.++++|+ ++|+.|++++++|+++. .+++.+++++++++|++.|+++ +.+.+.+. .+.+..+.+
T Consensus 315 ~~~~~~~~~T~~--~~pl~~aaa~a~L~~i~-------~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~ 385 (445)
T PRK09221 315 YAIEFFHGYTYS--AHPVACAAGLATLDIYR-------EEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIEL 385 (445)
T ss_pred cccccccccCCC--cCHHHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEE
Confidence 2444555 99999999999999983 3467899999999999999876 32221221 234444544
Q ss_pred CCc-----chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 406 YNP-----AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 406 ~~~-----~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
... .....+.+.|+++||++.+. .+.+||+||+.+|++|||+++++|+++++++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~Gv~~~~~--------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 386 APRPGAPGARGYEAFMKCFEKGLLVRYT--------GDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ecccccccchHHHHHHHHHHCCeEEeec--------CCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 321 13457889999999998731 2689999999999999999999999999765
No 51
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-41 Score=342.10 Aligned_cols=358 Identities=15% Similarity=0.160 Sum_probs=269.8
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||.+ .....+||+||++.+|+++|+++...... .+..
T Consensus 34 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~----~~~~ 94 (457)
T PRK05639 34 LFPLVPKRGFGALIEDVD---------------GNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMI----GYTH 94 (457)
T ss_pred CCCceEEeeecCEEEeCC---------------CCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhcccccc----CccC
Confidence 357779999999999999 999999954 45678999999999999999998643221 1123
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC------------
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA------------ 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~------------ 207 (488)
++...+|.++|++.++. +++++++||++|++.+++ ..+++..+|.+...+|+.+..+..+++.
T Consensus 95 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 174 (457)
T PRK05639 95 SERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM 174 (457)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence 46668899999998864 579999999999976554 4467777888889999998877665431
Q ss_pred -eEEEeeCCC-------------HHHHHH----HHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHH
Q 040324 208 -TIRVFQHNT-------------PSHLEE----VLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITI 265 (488)
Q Consensus 208 -~v~~~~~~d-------------~~~Le~----~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l 265 (488)
.+..+++++ .+++.+ .+++.+... ...+.+.++||+||+++.+|.+.| +++|+++
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~---~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSH---VVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHh---hcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 123334332 222211 222221110 001247999999999999998664 9999999
Q ss_pred HHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccCC
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYATS 342 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~~ 342 (488)
|++||++||+||||+ +|||+|.+ +.+++|+.| ||+ +|+|++|++. |++++++++++. ....+. ++.+
T Consensus 252 c~~~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Div--~~gK~l~gG~pi~av~~~~~i~~~-~~~~~~--~T~~ 321 (457)
T PRK05639 252 LDEHGILLVMDEVQT--GIGRTGKWFASEWFEVKP---DLI--IFGKGVASGMGLSGVIGRKELMDL-TSGSAL--LTPA 321 (457)
T ss_pred HHHcCCEEEEechhh--ccCcCchHHHHHhcCCCC---CEE--EechhhcCCCcceeEEehHHHHhh-cCCCcc--cCCC
Confidence 999999999999999 89999998 778899988 777 7999997532 889999999983 222333 4445
Q ss_pred CCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCC--CCCCeEEEEeCCc------chHH
Q 040324 343 ISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGD--NDSPVMPIMVYNP------AKVS 412 (488)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~~------~~~~ 412 (488)
++|+.|++++++|+++ +.+++.+++++++++|+++|+++ +.++..+ ..+.++.+.+..+ ....
T Consensus 322 g~p~~~aaa~a~l~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~ 394 (457)
T PRK05639 322 ANPVISAAAEATLEII-------EEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTG 394 (457)
T ss_pred cCHHHHHHHHHHHHHH-------HHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHH
Confidence 9999999999999999 44678899999999999999874 3333222 2346666666332 2355
Q ss_pred HHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 413 SFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.+.+.|+++|+++.+.+ ...+++||.||+.+|++|+|+++++++++++.+
T Consensus 395 ~~~~~~~~~Gv~~~~~g-----~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 395 KICWRAFELGLILPSYG-----MFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred HHHHHHHhCCeEEeecC-----CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 78899999999997432 224799999999999999999999999999876
No 52
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=4e-41 Score=342.46 Aligned_cols=359 Identities=15% Similarity=0.161 Sum_probs=270.8
Q ss_pred cccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC
Q 040324 65 DCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 65 ~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (488)
+.+|..+.+++|+++||.| |++||||.| .....+||+||.+.+|+++|+++....... . .
T Consensus 10 ~~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~---~-~ 70 (443)
T PRK07483 10 RATLPVAVAGEGIYLIDAT---------------GKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS---F-F 70 (443)
T ss_pred cCCCceEEeceEEEEEeCC---------------CCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc---c-c
Confidence 4567889999999999999 999999954 466789999999999999999986422211 1 2
Q ss_pred ChhhHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhc---c------cCCCcEEEEeCCCchHHHHHHHhcCCe----
Q 040324 144 TLALHNELEECVARFVG--KPAAIVFGMGYVTNSSILPV---L------MGKGSLIISDSLNHNSIVNGARGSGAT---- 208 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~---~------~~~~~~Vl~~~~~h~~~~~~~~~~g~~---- 208 (488)
.++...+|.++|++.++ .+++++.+||++|++.+++. + .++..+|.+...+|+.+..++.+++..
T Consensus 71 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~ 150 (443)
T PRK07483 71 TTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRRE 150 (443)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCccccc
Confidence 35667899999999875 36899999999999766553 3 244557777899999988777665421
Q ss_pred --------EEEee----CCCH--------------HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC-CCCCCC---
Q 040324 209 --------IRVFQ----HNTP--------------SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM-EGELCK--- 258 (488)
Q Consensus 209 --------v~~~~----~~d~--------------~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~-~G~~~~--- 258 (488)
+..++ +++. +++++.+... .+...++||+|||++. +|.+.+
T Consensus 151 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~iAAvivEPiqg~~gG~~~~~~~ 221 (443)
T PRK07483 151 PFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILEL---------GPDTVAAFVAETVVGATAGAVPPVPG 221 (443)
T ss_pred ccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc---------CCCceEEEEEeCcccCcCCeEeCCHH
Confidence 11121 1221 3445444321 1237899999999984 676664
Q ss_pred -hHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh
Q 040324 259 -LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN 333 (488)
Q Consensus 259 -l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~ 333 (488)
|++|+++|++||++||+|||++ +|||+|.+ +.+++++.| ||+ |++|++|++ .|++++++++++.+...
T Consensus 222 fl~~lr~lc~~~gillI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~ 294 (443)
T PRK07483 222 YFKRIREVCDRYGVLLILDEVMC--GMGRTGTLFACEEDGVAP---DLV--TIAKGLGAGYQPIGAVLASDRIYDAIADG 294 (443)
T ss_pred HHHHHHHHHHHhCCEEEEeccee--CcccCcHHHHHhhcCCCC---Cee--eehhhhccCccccEEEEEcHHHHHHHhcC
Confidence 9999999999999999999999 99999988 778999998 777 999999753 38899999999988643
Q ss_pred ----CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecC--CCCCCeEEEEe
Q 040324 334 ----CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMV 405 (488)
Q Consensus 334 ----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~ 405 (488)
.+++||+ +||+.|++++++|+++ +.+++.+++++++++|+++|+++ ..+.+. ...+.++.+.+
T Consensus 295 ~~~~~h~~T~~--gnpl~~aaa~a~l~~i-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~ 365 (443)
T PRK07483 295 SGFFQHGHTYL--GHATACAAALAVQRVI-------AEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVEL 365 (443)
T ss_pred CCccccCCCCC--CCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEE
Confidence 2445555 9999999999999999 34678899999999999999764 222221 12356667766
Q ss_pred CCc-----------chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 406 YNP-----------AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 406 ~~~-----------~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
..+ .....+.+.|+++|+++.+.+........+.+||+||+.+|++|||+++++|++++.++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 366 VADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred eecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 322 12357889999999999864321111123789999999999999999999999999765
No 53
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=2.2e-41 Score=344.88 Aligned_cols=343 Identities=18% Similarity=0.188 Sum_probs=264.8
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
+|..+.+++|+++||+| |++||||. +.....+||+||++.+|+++|+++.. ... ..+
T Consensus 81 ~p~~~~~a~G~~l~D~d---------------G~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-~~~------~~~ 138 (474)
T PLN02482 81 QPIVFDRVKGSYAWDVD---------------GNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT-SFG------APC 138 (474)
T ss_pred CCeeEEEeeeCEEEECC---------------CCEEEEecccccccccCCCCHHHHHHHHHHHhhCC-CCC------CCC
Confidence 45668999999999999 99999995 45667899999999999999999853 221 245
Q ss_pred hhHHHHHHHHHHHhC-CCCeEEeCCcHHHHhhhh---hcccCCCcEEEEeCCCchHHHHHHHh--c-----------C--
Q 040324 146 ALHNELEECVARFVG-KPAAIVFGMGYVTNSSIL---PVLMGKGSLIISDSLNHNSIVNGARG--S-----------G-- 206 (488)
Q Consensus 146 ~~~~~l~~~la~~~g-~~~~i~~~sGs~a~~~~~---~~~~~~~~~Vl~~~~~h~~~~~~~~~--~-----------g-- 206 (488)
+...+|.++|++.++ .+.+.+++||++|++.++ ++++++..+|.+...||+.+...... . +
T Consensus 139 ~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~ 218 (474)
T PLN02482 139 LLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVP 218 (474)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCC
Confidence 666789999998875 478999999999996554 45678887888888899965321110 0 1
Q ss_pred ----CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 040324 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 207 ----~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~ 278 (488)
..+..+++||+++|++.++++ +...++||+|+++++.|.+.| |++|+++|++||++||+|||
T Consensus 219 ~~~~~~~~~~~~nd~~~l~~~l~~~----------~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV 288 (474)
T PLN02482 219 KAATSATLTAPYNDLEAVKKLFEAN----------KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEV 288 (474)
T ss_pred CCCCCCeEEecCCChHHHHHHHHhC----------CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 134667899999999988752 236889999999999998876 77999999999999999999
Q ss_pred ccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhC---CCCcccCCCCHHHHHHHH
Q 040324 279 HSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNC---PAHLYATSISPPAAEQII 352 (488)
Q Consensus 279 ~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~---~~~~~~~~~~p~~~aa~~ 352 (488)
|+ +| |+|.+ +.+++|+.| |++ ||+|++|++ .|++++++++++.+.... ++.||+ ++|+.+++++
T Consensus 289 ~t--Gf-R~g~~ga~~~~gv~P---Di~--t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~--gnpl~~aAal 358 (474)
T PLN02482 289 MT--GF-RIAYGGAQEYFGITP---DLT--TLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLS--GNPLAMTAGI 358 (474)
T ss_pred cc--Ce-ecCcchHhHHhCCCC---CEE--EecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcc--hhHHHHHHHH
Confidence 98 88 77766 778899988 676 999999852 377899999999886322 333444 9999999999
Q ss_pred HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCc-------------chHHHHH
Q 040324 353 SAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNP-------------AKVSSFS 415 (488)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 415 (488)
++|++++ .+++.+++.+++++|+++|+++ |+++.......++.+.+... .....+.
T Consensus 359 a~L~~l~-------~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~ 431 (474)
T PLN02482 359 HTLKRLQ-------QPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFH 431 (474)
T ss_pred HHHHHHh-------ccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHH
Confidence 9999983 3468889999999999999876 34443222233665655321 1245788
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.|+++||++.+.+++. + .||+.||++|||++++++++++.++
T Consensus 432 ~~l~~~Gv~~~~~~~~~--------~-~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 432 RGMLEEGVYLAPSQFEA--------G-FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred HHHHHCCeEEeccCCCC--------C-cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 99999999998654432 1 3789999999999999999998753
No 54
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.5e-41 Score=342.85 Aligned_cols=346 Identities=17% Similarity=0.180 Sum_probs=269.0
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhh
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLAL 147 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (488)
..+.+++|+++||.| |++||||.+ .....+||+||++.+|+++|++++...... ...++.
T Consensus 31 ~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~----~~~~~~ 91 (466)
T PRK07030 31 IPIRRGEGVWLEDFE---------------GKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA----GFSHEP 91 (466)
T ss_pred ceEEeeeccEEEECC---------------CCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc----ccCCHH
Confidence 468899999999999 999999954 466789999999999999999986443321 124566
Q ss_pred HHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe--------
Q 040324 148 HNELEECVARFVG--KPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (488)
Q Consensus 148 ~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (488)
..+|.++|++.++ .+++++++||++|++.+++.. +++..+|.+...+|+.+..++.+++..
T Consensus 92 ~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p 171 (466)
T PRK07030 92 VIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKP 171 (466)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCc
Confidence 7899999999875 357899999999997776654 345567888889999988777665421
Q ss_pred ----EEEeeCC-----------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-cCCCCCCCCC----hHHH
Q 040324 209 ----IRVFQHN-----------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-IYSMEGELCK----LPEI 262 (488)
Q Consensus 209 ----v~~~~~~-----------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v~s~~G~~~~----l~~l 262 (488)
+..++.. +++++++.+.+. +...++||+|| |++.+|.+.+ +++|
T Consensus 172 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~----------~~~iAAvi~EP~iqg~gG~~~~~~~yl~~l 241 (466)
T PRK07030 172 LLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH----------HDEIAAVIVEPLIQGAGGMRMYHPVYLKLL 241 (466)
T ss_pred cCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC----------CCceEEEEEecccccCCCcccCCHHHHHHH
Confidence 1122211 244556666531 24789999999 7999888764 9999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHh------
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKY------ 332 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~------ 332 (488)
+++|++||++||+|||++ +|||+|.+ +.+++|+.| ||+ +++|++|++ .|++++++++++.+..
T Consensus 242 r~lc~~~g~llI~DEV~T--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~ 314 (466)
T PRK07030 242 REACDRYGVHLIHDEIAV--GFGRTGTMFACEQAGIRP---DFL--CLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLR 314 (466)
T ss_pred HHHHHHcCCEEEEeehhh--CcCccccchHHHhcCCCC---CEE--eeehhccCCcccceEEEecHHHHHHHhccccccc
Confidence 999999999999999999 99999987 788999998 777 899999753 3889999999988753
Q ss_pred -hCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecC--CCCCCeEEEEeCCc
Q 040324 333 -NCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLG--DNDSPVMPIMVYNP 408 (488)
Q Consensus 333 -~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~ 408 (488)
..+++||+ +||+.|++++++|+++ +.+++.++.++++++|++.|+++ ..+.+. ...+.++.+.+...
T Consensus 315 ~~~h~~T~~--gnpla~aaa~a~L~~i-------~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~ 385 (466)
T PRK07030 315 AFLHSHSYT--GNPLACAAALATLDIF-------EQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQD 385 (466)
T ss_pred ccccCCCCC--CCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccC
Confidence 13445555 9999999999999999 34578899999999999999876 222111 12346666666321
Q ss_pred c-----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 409 A-----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 409 ~-----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
. ....+.+.|+++|+++.+.+ +.+||.||+.+|++|||+++++++++++++
T Consensus 386 ~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g--------~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 386 KASKTPYPWQERRGLKVYQHALERGALLRPLG--------SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred ccccccCcchhHHHHHHHHHHHHCCeEEEecC--------CEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 1 13478889999999997421 589999999999999999999999999988
No 55
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=5.7e-41 Score=342.18 Aligned_cols=350 Identities=18% Similarity=0.204 Sum_probs=264.3
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
+..+.+++|+|+||.| |++||||.| .....+||+||++.+|+++|++++..... .....++
T Consensus 33 ~~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~---~~~~~~~ 94 (456)
T PRK07480 33 SRVITRAEGVYLWDSE---------------GNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNT---FFKTTHP 94 (456)
T ss_pred CceEEeceeeEEEeCC---------------CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc---ccccCCH
Confidence 4678999999999999 999999954 45678999999999999999998643321 1113467
Q ss_pred hHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe-------
Q 040324 147 LHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT------- 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (488)
...+|+++|++.++. +++++.+||++|++.+++.. .++..+|.+...+|+.+..+...++..
T Consensus 95 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~ 174 (456)
T PRK07480 95 PAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGD 174 (456)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccC
Confidence 778999999998854 57999999999997766543 234456667788999887766654421
Q ss_pred -----EEEeeCC---------C--------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHH
Q 040324 209 -----IRVFQHN---------T--------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEI 262 (488)
Q Consensus 209 -----v~~~~~~---------d--------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l 262 (488)
+..++.+ + .+.|++.+.+ ..+...++||+|||++.+|.+.+ |++|
T Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~l 245 (456)
T PRK07480 175 LPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILE---------LGADNVAAFIGEPIQGAGGVIIPPATYWPEI 245 (456)
T ss_pred CCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHh---------cCCCcEEEEEEccccCCCCCccCCHHHHHHH
Confidence 1112211 1 1344433332 11247899999999999998775 9999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHh----hC
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKY----NC 334 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~----~~ 334 (488)
+++|++||++||+|||++ +|||+|.+ +.+++|+.| ||+ +|+|++|++ .|++++++++++.+.. ..
T Consensus 246 r~lc~~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~ 318 (456)
T PRK07480 246 QRICRKYDILLVADEVIC--GFGRTGEWFGSQHFGIKP---DLM--TIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFN 318 (456)
T ss_pred HHHHHHcCCEEEEechhh--CCCcCcchhhhhhcCCCC---Cee--eeehhhccCCccceEEEEcHHHHHHHhcCCCCcc
Confidence 999999999999999999 99999988 788999998 777 999999763 3888889999998842 13
Q ss_pred CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH-HHHHHHHHHHHHhC-CCeecC--CCCCCeEEEEeCCcc-
Q 040324 335 PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI-RENSNFFRSKLQKM-GFEVLG--DNDSPVMPIMVYNPA- 409 (488)
Q Consensus 335 ~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~- 409 (488)
+++||+ +||+.|++++++|++++ .+++.+++ ++++++|+++|+++ ..+++. ...+.++.+.+..+.
T Consensus 319 ~~~T~~--gnpl~~Aaa~a~L~~l~-------~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~ 389 (456)
T PRK07480 319 HGFTYS--GHPVAAAVALANLRILR-------DEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKA 389 (456)
T ss_pred cCCCCC--cCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEecccc
Confidence 445555 99999999999999983 35678888 58899998888775 112111 123466677663221
Q ss_pred ----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 410 ----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 410 ----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
....+.+.|+++||++.+. .+.+||+||+.+|++|||+++++|++++.++.
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~Gll~~~~--------~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 390 TRERFEAGGGVGTICRDHCFANGLIMRAV--------GDRMIISPPLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred ccccCcchhhHHHHHHHHHHHCCcEEeec--------CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1246778899999999731 26899999999999999999999999998763
No 56
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.1e-42 Score=320.10 Aligned_cols=363 Identities=30% Similarity=0.509 Sum_probs=316.0
Q ss_pred CcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhh
Q 040324 98 NVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSI 177 (488)
Q Consensus 98 ~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~ 177 (488)
+|+.|+||+|.|++++..+ +++.+.+...+++||.+.|++|.+||+.+.|.+|++.||+|+|.++.++.+-|+.++..+
T Consensus 92 ~G~~~~N~aS~NfL~l~~~-~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ti~S~ 170 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIEN-EEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFSTIESA 170 (467)
T ss_pred cCceeecccchhhhhhccc-HHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcceeeeccccchhhhc
Confidence 3999999999999999976 789999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC
Q 040324 178 LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC 257 (488)
Q Consensus 178 ~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~ 257 (488)
+++++.+||+|.++...+..+..++.++...+..|+|||+++||+.+.+...+.+.....+.++..|++|++|-+.|.++
T Consensus 171 ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~ 250 (467)
T KOG1358|consen 171 IPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDIC 250 (467)
T ss_pred chhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCccc
Confidence 99999999999999999999999999999999999999999999988764422221111134467888999999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCCC
Q 040324 258 KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAH 337 (488)
Q Consensus 258 ~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~ 337 (488)
|+++|++++.||...+|+||..++|.+|++|+|+++|+++++.++|++++++.-+++..||+.+|+.-+.++-+-.+.++
T Consensus 251 pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~hQrLSg~~Y 330 (467)
T KOG1358|consen 251 PLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFIADHQRLSGSGY 330 (467)
T ss_pred ccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccCceeecceeeEeeeeccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888877778888
Q ss_pred cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcc-------
Q 040324 338 LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPA------- 409 (488)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------- 409 (488)
.|+.+.+|..+.++..+++++. +.++..+.++.....+.+.|+.. ++.+.++..+|++.+.+..+.
T Consensus 331 ~fSAslPp~la~aa~~ai~i~~------~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~ 404 (467)
T KOG1358|consen 331 CFSASLPPYLAGAAIKAILIEE------WNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEE 404 (467)
T ss_pred eeeccCchhhhhhHHHHHHHHh------hCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHH
Confidence 9999999999999999999875 44567888888888888888876 688888888998888775422
Q ss_pred -hHHHHHHHHHHCCceEEeecCCCc---cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 410 -KVSSFSRECLKQNVAIVTVGFPAT---PLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 410 -~~~~~~~~l~~~Gi~v~~~~~~~~---~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
...++++.++.+|+.+....+-.. -.-...+|+|++..+++||++++.+.|+++...+
T Consensus 405 ~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 405 KLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 234788888888988875333211 1112469999999999999999999999887654
No 57
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=9.5e-41 Score=340.91 Aligned_cols=354 Identities=16% Similarity=0.118 Sum_probs=268.6
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
+..+.+++|+|+||.| |++||||.+ .....+||+||.+.+|+++|+++....... ...++
T Consensus 35 ~~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~----~~~~~ 95 (460)
T PRK06541 35 VPVIVRGEGCYIWDDR---------------GKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLW----SYAHP 95 (460)
T ss_pred CceEEeCcccEEEeCC---------------CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcccc----ccCCH
Confidence 3457899999999999 999999954 456789999999999999999986443321 12456
Q ss_pred hHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc------c---CCCcEEEEeCCCchHHHHHHHhcCCe-------
Q 040324 147 LHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL------M---GKGSLIISDSLNHNSIVNGARGSGAT------- 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~------~---~~~~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (488)
...++.++|++..+. +++++++||++|++.+++.. + ++..+|.+...+|+.+..++..++..
T Consensus 96 ~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~ 175 (460)
T PRK06541 96 PAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFE 175 (460)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccC
Confidence 678899999998754 57899999999997766543 2 35567788889999988776654321
Q ss_pred -----EEEeeC----------CC--------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHH
Q 040324 209 -----IRVFQH----------NT--------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPE 261 (488)
Q Consensus 209 -----v~~~~~----------~d--------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~ 261 (488)
+..++. ++ ++.+++.++.. .+...++||+|||++++|.+.+ |++
T Consensus 176 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------~~~~~Aavi~EPv~g~~G~~~~~~~yl~~ 246 (460)
T PRK06541 176 PLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE---------GPDTVAAVFLEPVQNAGGCFPPPPGYFER 246 (460)
T ss_pred CCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc---------CCCCEEEEEECCccCCCCCccCCHHHHHH
Confidence 122221 12 24455555421 1247899999999999999887 999
Q ss_pred HHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC---cccEEEeCHHHHHHHHhhCC--
Q 040324 262 IITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS---YGGYIAGSKELIQYLKYNCP-- 335 (488)
Q Consensus 262 l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~---~Gg~i~~~~~~~~~~~~~~~-- 335 (488)
|+++|++||++||+||||+ +|||+|.+ ..+++|+.| |++ |++|++|+ +.|++++++++++.+.....
T Consensus 247 l~~lc~~~g~llI~DEV~t--GfGR~G~~~a~~~~gv~P---Div--t~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~ 319 (460)
T PRK06541 247 VREICDRYDVLLVSDEVIC--AFGRLGEMFGCERFGYVP---DII--TCAKGITSGYSPLGAMIASDRLFEPFLDGPTMF 319 (460)
T ss_pred HHHHHHHcCCEEEEechhh--CCCcCchhhhhhhcCCCC---CEE--EecccccCCccceeEEEEcHHHHHHhhcCCCcc
Confidence 9999999999999999999 99999987 778899988 777 89999985 34888999999988864321
Q ss_pred CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeec--CCCCCCeEEEEeCCcc---
Q 040324 336 AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVL--GDNDSPVMPIMVYNPA--- 409 (488)
Q Consensus 336 ~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~~~--- 409 (488)
.+.++.++||+.+++++++|+++. .+++.+++++++++|+++|+++ ..+++ ....+.++.+.+....
T Consensus 320 ~~~~T~~gnp~~~aaala~l~~l~-------~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~ 392 (460)
T PRK06541 320 LHGYTFGGHPVSAAVALANLDIFE-------REGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATK 392 (460)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccc
Confidence 122344599999999999999983 3467899999999999999886 22221 1234567777763211
Q ss_pred -----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 410 -----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 410 -----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
....+.+.|+++||++.+. +.+.+++||+||+.+|++|||+++++|+++++++.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 393 ETFTDDESERLLRGFLSPALFEAGLYCRAD-----DRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred cCCcchhhhhhHHHHHHHHHHhCCeEEEec-----CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1125778999999999842 22347899999999999999999999999998764
No 58
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=343.21 Aligned_cols=357 Identities=15% Similarity=0.150 Sum_probs=269.0
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
++| .+.+++|+|+||.| |++||||.++ ....+||+||++.+|+++|+++....... . -.
T Consensus 13 ~~p-~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~---~-~~ 72 (447)
T PRK06917 13 PYP-VISHGKGVYLYDQN---------------GNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRS---Q-FT 72 (447)
T ss_pred CCC-eEEeeeeeEEEeCC---------------CCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcccc---c-cC
Confidence 555 58999999999999 9999999544 56789999999999999999986333211 1 13
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe-----
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT----- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (488)
++...+|.++|++.++. +.+++++||++|++.+++.. +++..+|.+...+|+.+..++..++..
T Consensus 73 ~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~ 152 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQR 152 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccc
Confidence 56678999999998864 46888999999998777655 445667777888999988777655421
Q ss_pred -------EEEee--C------C---------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC-CCCCCC----h
Q 040324 209 -------IRVFQ--H------N---------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM-EGELCK----L 259 (488)
Q Consensus 209 -------v~~~~--~------~---------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~-~G~~~~----l 259 (488)
+..++ . + +++.+++.+++. .+.+.++||+||+++. +|.+.| +
T Consensus 153 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~---------~~~~iAAvi~EPi~g~~gG~~~p~~~fl 223 (447)
T PRK06917 153 FVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERI---------GAEHIAAFIAEPIIGAAGAAVVPPKGYY 223 (447)
T ss_pred CCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhc---------CCCceEEEEEeccccCcCceecCCHHHH
Confidence 11111 1 1 234555555431 1236899999999985 455553 9
Q ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC---cccEEEeCHHHHHHHHhhC-
Q 040324 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS---YGGYIAGSKELIQYLKYNC- 334 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~---~Gg~i~~~~~~~~~~~~~~- 334 (488)
++|+++|++||++||+|||++ +|||+|.+ +++++++.| |++ +++|++|+ +.|++++++++++.+....
T Consensus 224 ~~lr~lc~~~g~llI~DEv~t--GfGRtG~~~a~~~~gv~P---Di~--~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~ 296 (447)
T PRK06917 224 KVIKEICDHYDILFIADEVMT--GLGRTGAMFAMEHWGVEP---DIM--TLGKGLGAGYTPIAATVVSDRVMEPILRGSR 296 (447)
T ss_pred HHHHHHHHHcCCEEEEechhh--CcCcccchhhHHhcCCCC---CEE--EeeehhccCCcceEEEEEcHHHHHHHhccCc
Confidence 999999999999999999999 89999998 678999998 777 99999975 3588999999999886432
Q ss_pred ---CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeecC--CCCCCeEEEEeCC
Q 040324 335 ---PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEVLG--DNDSPVMPIMVYN 407 (488)
Q Consensus 335 ---~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~--~~~~~~~~~~~~~ 407 (488)
++.|++ +||+.|++++++|++++ .+++.+++++++++|++.|+++. .++.. ...+.++.+.+..
T Consensus 297 ~~~~~~T~~--gnpl~~aaa~a~l~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~ 367 (447)
T PRK06917 297 SIMSGHTLS--ANPLSAATALAVLEYME-------KHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVA 367 (447)
T ss_pred ccccccCCC--CCHHHHHHHHHHHHHHH-------HCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEec
Confidence 233444 99999999999999983 35688999999999999998761 22221 2234666666632
Q ss_pred c-----------chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 408 P-----------AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 408 ~-----------~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+ .....+.+.|+++||++.+.+........+.+||+||+.+|++|||+++++++++++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 368 DKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred cCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1 12557889999999999863321111224799999999999999999999999999887
No 59
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=9.5e-41 Score=339.45 Aligned_cols=355 Identities=15% Similarity=0.171 Sum_probs=271.9
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||. +.....+||+||++.+|+++|+++.+..+.. ...
T Consensus 20 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~ 80 (425)
T PRK09264 20 SFPVVFDKAKGSWLYDED---------------GKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL----DMH 80 (425)
T ss_pred CCCccEEeeecCEEEeCC---------------CCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc----ccC
Confidence 467789999999999999 99999994 4566789999999999999999986443321 123
Q ss_pred hhhHHHHHHHHHHHhC----CC-CeEEe-CCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC--------
Q 040324 145 LALHNELEECVARFVG----KP-AAIVF-GMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA-------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g----~~-~~i~~-~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (488)
++...+|.++|++.+. .+ +++++ +||++|++.+++ .++++..+|.+...+|+.+..++..++.
T Consensus 81 ~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 160 (425)
T PRK09264 81 TTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAG 160 (425)
T ss_pred cHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCC
Confidence 5666789999988752 23 35554 799999966554 4567777888889999998877665431
Q ss_pred ----eEEEeeC--------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCc
Q 040324 208 ----TIRVFQH--------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKA 271 (488)
Q Consensus 208 ----~v~~~~~--------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~ 271 (488)
.+..+++ +|+++|++.+++... .+...++||+|||++++|.+. +|++|+++|++||+
T Consensus 161 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~-------~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ 233 (425)
T PRK09264 161 VPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS-------GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDI 233 (425)
T ss_pred CCCCCeEEeCCCCccccchhHHHHHHHHHHhccC-------CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCc
Confidence 2334444 367778887764210 123688999999999999765 59999999999999
Q ss_pred EEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHH
Q 040324 272 YTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPA 347 (488)
Q Consensus 272 ~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~ 347 (488)
+||+||+|+ +|||+|.+ .++++++.| |++ |++|++|++| |++++++++ ..+....+..+++ ++|+.
T Consensus 234 llI~DEV~t--G~GrtG~~~~~~~~~v~P---Di~--t~~K~l~~~G~pigav~~~~~i-~~~~~~~~~~T~~--gnp~~ 303 (425)
T PRK09264 234 LLIVDDIQA--GCGRTGTFFSFERAGITP---DIV--TLSKSISGYGLPMALVLIKPEL-DVWKPGEHNGTFR--GNNLA 303 (425)
T ss_pred EEEEechhh--CCccccHHHHHhhcCCCC---CEE--EeccccCCCccceEEEEEchhh-hccCCCccCCCCC--CCHHH
Confidence 999999999 89999987 678889988 666 8999998755 889988887 3443333444555 89999
Q ss_pred HHHHHHHH-HHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCe---ecCCCCCCeEEEEeCCcchHHHHHHHHHHC
Q 040324 348 AEQIISAI-QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFE---VLGDNDSPVMPIMVYNPAKVSSFSRECLKQ 421 (488)
Q Consensus 348 ~aa~~a~L-~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 421 (488)
+++++++| +++ ..+++.+++++++++|+++|+++ ..+ ......+.++++.+........+++.|+++
T Consensus 304 ~aaa~a~l~~~~-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~ 376 (425)
T PRK09264 304 FVTATAALEEYW-------SDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFEN 376 (425)
T ss_pred HHHHHHHHHHHH-------hhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHC
Confidence 99999999 444 33578899999999999988764 222 111224577788887666677899999999
Q ss_pred CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 422 NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 422 Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
||++.+.+. ..+++||+||+.+|++|+++++++|+++++++.
T Consensus 377 Gv~~~~~~~-----~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 377 GLIIETSGP-----EDEVVKLLPPLTIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred CCEEeccCC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999975321 237999999999999999999999999998863
No 60
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=9.1e-41 Score=338.84 Aligned_cols=347 Identities=15% Similarity=0.106 Sum_probs=275.0
Q ss_pred cccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC
Q 040324 65 DCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 65 ~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (488)
.++|..+.+++|++++|.| |++||||+|+ ....+||+||++.+++.++++++.... .. .
T Consensus 20 ~~~~~~~~~~~G~~~~d~d---------------G~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~----~~-~ 79 (403)
T PRK05093 20 APAEFIPVRGEGSRVWDQQ---------------GKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHIS----NV-F 79 (403)
T ss_pred CCCCeeEEEeecCEEEeCC---------------CCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCccc----Cc-c
Confidence 3677888999999999999 9999999664 334566778999999999998853221 12 2
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhc---------
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGS--------- 205 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~--------- 205 (488)
.++...+++++|+++.+.+++++++||++||+.+++.+ .++.++|.++..+|+++..+..+.
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 80 TNEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 45667899999999988789999999999998777654 356778889999999987654432
Q ss_pred ---CCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 040324 206 ---GATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 206 ---g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~ 278 (488)
...+..+++||++++++.+.+ +.++|++||+++++|.+.+ +++|+++|++||+++|+||+
T Consensus 160 ~~~~~~~~~~~~~d~~~l~~~l~~-------------~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv 226 (403)
T PRK05093 160 GPKPADITHVPFNDLAAVKAVIDD-------------HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEV 226 (403)
T ss_pred CCCCCCcEEeCCCCHHHHHHHhcC-------------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 234677889999999988753 4678889999999998754 99999999999999999999
Q ss_pred ccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHH
Q 040324 279 HSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAI 355 (488)
Q Consensus 279 ~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L 355 (488)
|+ ++|++|++ ..++++++| |+. ||||+++++ .|++++++++++.+....+..+++ ++|+.++++.++|
T Consensus 227 ~~--g~g~~g~~~~~~~~~~~p---di~--s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~~--~~~~~~~aa~a~L 297 (403)
T PRK05093 227 QT--GMGRTGDLFAYMHYGVTP---DIL--TSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTYG--GNPLACAVAEAVF 297 (403)
T ss_pred hh--CCCCCccchhhhhcCCCC---CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCCC--CCHHHHHHHHHHH
Confidence 99 79999976 445678877 554 999999842 299999999999887655554554 8999999999999
Q ss_pred HHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCC----eecCCCCCCeEEEEeCCcc--hHHHHHHHHHHCCceEEeec
Q 040324 356 QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGF----EVLGDNDSPVMPIMVYNPA--KVSSFSRECLKQNVAIVTVG 429 (488)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~Gi~v~~~~ 429 (488)
+.+. .++..++++++.+++++.|++++. ....+..+.++++.+.... ...++++.|+++||.+.+.
T Consensus 298 ~~~~-------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~- 369 (403)
T PRK05093 298 DIIN-------TPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA- 369 (403)
T ss_pred HHHh-------hccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC-
Confidence 9873 345678899999999999988632 1122234566777765432 4678999999999998842
Q ss_pred CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 430 FPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 430 ~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.+++||+|++.+|+++|++++++|+++++++
T Consensus 370 ------g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 370 ------GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 24789999999999999999999999988754
No 61
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=1.2e-39 Score=331.09 Aligned_cols=369 Identities=32% Similarity=0.560 Sum_probs=301.0
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhH
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALH 148 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~ 148 (488)
..+.+++|+++++.+ |+++|||++++++|++. +|.+.+++.+++++++..++.++...|..+..
T Consensus 26 ~~~~~~~~~~~~~~~---------------g~~~i~l~~~~~~~~~~-~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~ 89 (397)
T PRK06939 26 RVITSPQGADITVAD---------------GKEVINFCANNYLGLAN-HPELIAAAKAALDSHGFGMASVRFICGTQDLH 89 (397)
T ss_pred ccccCCCCceEEecC---------------CCeEEEeeccCccccCC-CHHHHHHHHHHHHHcCCCCcccccccCCcHHH
Confidence 457889999999988 99999999888888874 68899999999988766555555566888888
Q ss_pred HHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHH
Q 040324 149 NELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQI 228 (488)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~ 228 (488)
.++++.++++++.++.+++++|++++..++.++.++||.|+++.++|+++..+++..+++++.++++|++++++.+++..
T Consensus 90 ~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 169 (397)
T PRK06939 90 KELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEAK 169 (397)
T ss_pred HHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhh
Confidence 99999999999988899999999999888888999999999999999999999999999999998899999999887642
Q ss_pred hcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcc
Q 040324 229 AEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGT 308 (488)
Q Consensus 229 ~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t 308 (488)
.+ ..+..+|+++++++++|.+.++++|+++|++||++||+||+|+.|.++.+|.+....+++. +++|++++|
T Consensus 170 ~~-------~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S 241 (397)
T PRK06939 170 EA-------GARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGT 241 (397)
T ss_pred cc-------CCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEE
Confidence 21 0134677788999999999999999999999999999999998666666665544555664 346899999
Q ss_pred ccccc-CCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 040324 309 FSKSF-GSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK 387 (488)
Q Consensus 309 ~sK~~-g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (488)
+||++ |..|||+++++++++.+......+.++.+.++..+++++++++.+. ..++++++++++.+++.+.|++
T Consensus 242 ~sK~~~g~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~------~~~~~~~~~~~~~~~l~~~L~~ 315 (397)
T PRK06939 242 LGKALGGASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE------ESDELRDRLWENARYFREGMTA 315 (397)
T ss_pred CHHHhCccCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHH
Confidence 99999 4456999999999999887555445555567777777888888763 2357788999999999999999
Q ss_pred CCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 388 MGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.++++..+ .+.++++.+.......++++.|+++||.+.+..|+..+.+.+++|++++..+|++|+++++++|++++++.
T Consensus 316 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 316 AGFTLGPG-EHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred cCCCcCCC-CCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 88766543 34555555544345678999999999999875555444455789999999999999999999999998876
Q ss_pred C
Q 040324 468 G 468 (488)
Q Consensus 468 ~ 468 (488)
+
T Consensus 395 ~ 395 (397)
T PRK06939 395 G 395 (397)
T ss_pred C
Confidence 5
No 62
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.3e-41 Score=339.49 Aligned_cols=349 Identities=12% Similarity=0.114 Sum_probs=266.3
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+++++|+|+||.| |++||||. +.....+||+||++.+|+++|++++..... ..-.
T Consensus 21 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~----~~~~ 81 (422)
T PRK05630 21 VRNRLVTSTDGVFLTLED---------------GSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMF----GGLT 81 (422)
T ss_pred CCCeeEEeceeeEEEECC---------------CCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCccc----CCcC
Confidence 466789999999999999 99999995 456678999999999999999998643221 1124
Q ss_pred hhhHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhccc---------CCCcEEEEeCCCchHHHHHHHhcCCe-----
Q 040324 145 LALHNELEECVARFVG--KPAAIVFGMGYVTNSSILPVLM---------GKGSLIISDSLNHNSIVNGARGSGAT----- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~~---------~~~~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (488)
++...+|.++|++..+ .+++++++||++|++.+++... ++..+|.....+|+.+..++..++..
T Consensus 82 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~ 161 (422)
T PRK05630 82 HEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHS 161 (422)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccc
Confidence 5667899999999875 3689999999999977665432 34567778889999887776654421
Q ss_pred --------EEEeeCC-----CHHHHH---HHHHHHHhcCCCCCCCCCceEEEEEcCc-CCCCCCCC----ChHHHHHHHH
Q 040324 209 --------IRVFQHN-----TPSHLE---EVLREQIAEGQPRTRRPWKKIMVVVEGI-YSMEGELC----KLPEIITICK 267 (488)
Q Consensus 209 --------v~~~~~~-----d~~~Le---~~l~~~~~~~~p~~~~~~~~~~vi~e~v-~s~~G~~~----~l~~l~~l~~ 267 (488)
...++.. +.++++ +.+++.+. .+.++||+||+ ++.+|.+. ++++|+++|+
T Consensus 162 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~ 232 (422)
T PRK05630 162 LWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---------ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCD 232 (422)
T ss_pred cccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---------hceEEEEEechhcCcCCcccCCHHHHHHHHHHHH
Confidence 1112211 122222 22222221 16899999996 88888765 3999999999
Q ss_pred HcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC---cccEEEeCHHHHHHHHhh------CCCC
Q 040324 268 RYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS---YGGYIAGSKELIQYLKYN------CPAH 337 (488)
Q Consensus 268 ~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~---~Gg~i~~~~~~~~~~~~~------~~~~ 337 (488)
+||++||+||||+ ++||+|++ +.+++++.| ||+ |++|++++ ++|++++++++++.+... .++.
T Consensus 233 ~~g~llI~DEv~t--G~GrtG~~~a~~~~gv~P---Di~--t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~ 305 (422)
T PRK05630 233 KHDILLIADEIAT--GFGRTGELFATLAAGVTP---DIM--CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGP 305 (422)
T ss_pred HcCCEEEEeccee--CCCcCchhhHHHhcCCCC---Cee--eeechhhcCccccceeeccHHHHHHHhccCCCCccccCC
Confidence 9999999999999 99999988 678899998 777 99999954 458999999999988532 2445
Q ss_pred cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCC--CCCCeEEEEeCCcchHHHH
Q 040324 338 LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGD--NDSPVMPIMVYNPAKVSSF 414 (488)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~~~~~~~~~~~~~~~~~ 414 (488)
+|+ +||+.|++++++|++++ .++..+++++++++|++.|+++. .+.+.+ ..+.++.+.+..+.....+
T Consensus 306 T~~--g~Pla~aaa~aaL~~l~-------~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~ 376 (422)
T PRK05630 306 TFM--ANPLACAVAHASLEIIE-------TGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPVDMEEA 376 (422)
T ss_pred CCc--CCHHHHHHHHHHHHHHH-------hCcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcccHHHH
Confidence 555 99999999999999994 23567789999999999887652 121111 2367888888665456689
Q ss_pred HHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 415 SRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 415 ~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.+.|+++|+++.+. + +.+||.||+.+|++|+|+++++++++++.
T Consensus 377 ~~~~~~~Gl~~~~~-------g-~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 377 TQAAVDHGVWLRPF-------G-RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHCCeEEEec-------C-CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 99999999998742 2 68999999999999999999999999854
No 63
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.5e-41 Score=340.82 Aligned_cols=346 Identities=17% Similarity=0.169 Sum_probs=265.2
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||. ++....+||+||++.+|+.+|+++.. .. ...
T Consensus 34 ~~p~~i~~a~G~~l~D~d---------------G~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~------~~~ 91 (433)
T PRK00615 34 ITPPIVSSASGDIFIDSL---------------GKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT-SY------GLT 91 (433)
T ss_pred CCCceEEEeeeCEEEECC---------------CCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC-CC------CCC
Confidence 567779999999999999 99999995 45667899999999999999998842 11 124
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHH---HHHHHhcC----------
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSI---VNGARGSG---------- 206 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~---~~~~~~~g---------- 206 (488)
++...+|.++|++.++. +++.+++||++|++.+++ ..+++..+|.+...+|+.+ ..+...++
T Consensus 92 ~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~ 171 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLV 171 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCC
Confidence 56678899999998864 479999999999966554 4567777788888899965 33322221
Q ss_pred ------CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 040324 207 ------ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLD 276 (488)
Q Consensus 207 ------~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~D 276 (488)
.....+++||+++|++.+.+. +...++||+||++++.|.+.| +++|+++|++||++||+|
T Consensus 172 ~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~D 241 (433)
T PRK00615 172 DTDLAHPLTLSLPYNDFQIFQTVMNSL----------GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMD 241 (433)
T ss_pred CCCCCCCCeEeCCCCCHHHHHHHHHhc----------CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 112445788999999988752 126789999999999999886 669999999999999999
Q ss_pred ccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHHHHhhCCC-CcccCCCCHHHHHHHH
Q 040324 277 EAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQYLKYNCPA-HLYATSISPPAAEQII 352 (488)
Q Consensus 277 E~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~~~~~~~~-~~~~~~~~p~~~aa~~ 352 (488)
|||+ ++ |+|.+ +.++++++| ||+ +|+|++|+ ++|++++++++++.+...... +..+.+++|+.|++++
T Consensus 242 Ev~t--G~-R~G~~ga~~~~gv~P---Di~--~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~l 313 (433)
T PRK00615 242 EVVT--GF-RVAQGGAAAIYHVKP---DIT--VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGK 313 (433)
T ss_pred cccc--cc-cccHhHHHHhcCCCC---CeE--EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHH
Confidence 9998 88 77765 778899988 776 89999975 469999999999988643211 1123349999999999
Q ss_pred HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCc-------------chHHHHH
Q 040324 353 SAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNP-------------AKVSSFS 415 (488)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 415 (488)
++|++++ .+++++++++++++|+++|+++ |+++.....+.++.+.+... .....+.
T Consensus 314 a~L~~i~-------~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (433)
T PRK00615 314 ASINLCR-------EQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFY 386 (433)
T ss_pred HHHHHHh-------cccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHH
Confidence 9999984 2457888888888887777653 55432222355666666422 2244799
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
++|+++||++.+..++. ..++..||++|||+++++++++++++
T Consensus 387 ~~l~~~Gv~~~~~~~~~---------~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 387 QSAFSKGVYLSPSPFEA---------SFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHCCeeecCccccc---------cceecCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999998644432 14577999999999999999999876
No 64
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-40 Score=340.02 Aligned_cols=346 Identities=14% Similarity=0.146 Sum_probs=263.4
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhh
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLAL 147 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (488)
..+.+++|+|+||.| |++||||.+ .....+||+||++.+|+++|++++...... .-.++.
T Consensus 48 ~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~----~~~~~~ 108 (472)
T PRK08742 48 VPIARGEGAWLVGHD---------------GRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA----GFTHEP 108 (472)
T ss_pred eeEEecccCEEEeCC---------------CCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc----ccCCHH
Confidence 457999999999999 999999954 455789999999999999999986543321 123566
Q ss_pred HHHHHHHHHHHhCC-------CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe---
Q 040324 148 HNELEECVARFVGK-------PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT--- 208 (488)
Q Consensus 148 ~~~l~~~la~~~g~-------~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~--- 208 (488)
..+|.++|++.++. +++++.+||++||+.+++.. .++..+|.+...+|+.+..++..++..
T Consensus 109 ~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~ 188 (472)
T PRK08742 109 AVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYR 188 (472)
T ss_pred HHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccc
Confidence 78999999998753 47899999999997766654 235667788889999988777665421
Q ss_pred ---------EEEeeCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-cCCCCCCCCC---
Q 040324 209 ---------IRVFQHNT-----------------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-IYSMEGELCK--- 258 (488)
Q Consensus 209 ---------v~~~~~~d-----------------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v~s~~G~~~~--- 258 (488)
+..++.++ ++.+++.+... +...++||+|| +++.+|.+.+
T Consensus 189 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~iAAvI~EPviqg~gG~~~~p~~ 258 (472)
T PRK08742 189 RVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS----------PGEICALILEPRLQCAGGMRMHHPA 258 (472)
T ss_pred cccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC----------CCceEEEEEccccccCCCcccCCHH
Confidence 12222221 34445555421 24789999999 6888887653
Q ss_pred -hHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh
Q 040324 259 -LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN 333 (488)
Q Consensus 259 -l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~ 333 (488)
+++++++|++||++||+|||++ +|||+|.+ +++++|+.| ||+ +++|++|++ -|++++++++++.+...
T Consensus 259 fl~~lr~lc~~~gillI~DEV~T--GfGRtG~~~a~e~~gv~P---Div--~~gKgl~gG~~Plaav~~~~ei~~~~~~~ 331 (472)
T PRK08742 259 YLRRARELCDAHGAFLIADEIAT--GFGRTGTLFACEQAGVMP---DLL--CLSKGLTGGFLPLSAVLATQQLYDAFLDD 331 (472)
T ss_pred HHHHHHHHHHHcCCEEEEechhh--CCCCCccchHHHhcCCCC---CEE--EEcccccCCCCCcceeeccHHHHHHhhcc
Confidence 9999999999999999999999 99999988 788999998 788 899999753 38889999999887531
Q ss_pred ------CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC--CCCCeEEEE
Q 040324 334 ------CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD--NDSPVMPIM 404 (488)
Q Consensus 334 ------~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~~ 404 (488)
.+++||+ +||+.|++++++|++++ .+++.++.++.+++|++.++.+ ..+.+.+ ..+.++.+.
T Consensus 332 ~~~~~~~h~~T~~--gnpl~~Aaa~a~L~~i~-------~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~gie 402 (472)
T PRK08742 332 SRERAFLHSHSYT--GNPLACAAALATLDIFA-------DDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFE 402 (472)
T ss_pred CccCccCcCCCCC--ccHHHHHHHHHHHHHHH-------HCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEE
Confidence 2444555 99999999999999993 4567888888888888766654 1222222 234666776
Q ss_pred eCCcc-----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 405 VYNPA-----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 405 ~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+..+. ....+.+.|+++||++.+. + +++||.||+.+|++|||+++++|+++++++
T Consensus 403 l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------g-~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 403 LTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL-------G-DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred eccCccccccCCchhHHHHHHHHHHHHCCeEEEec-------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 64211 1246788999999999742 1 689999999999999999999999999764
No 65
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.1e-40 Score=339.06 Aligned_cols=343 Identities=16% Similarity=0.173 Sum_probs=267.2
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||. +++...+||+||.+.+|+.+|+++... .. ..
T Consensus 34 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~------~~ 91 (428)
T PRK12389 34 GAPVVMERGKGAYFYDVD---------------GNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVL-YG------TP 91 (428)
T ss_pred CCCeEEEeccCCEEEeCC---------------CCEEEEccccccccccCCCCHHHHHHHHHHHHhCCc-cC------CC
Confidence 346678999999999999 99999994 456678999999999999999988532 11 24
Q ss_pred hhhHHHHHHHHHHHhC-CCCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcC--------------
Q 040324 145 LALHNELEECVARFVG-KPAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSG-------------- 206 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g-------------- 206 (488)
++...++.++|++.++ .+++++++||++|++.+++ .++++..+|.+...+|+.+...+..++
T Consensus 92 ~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 171 (428)
T PRK12389 92 TELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGV 171 (428)
T ss_pred CHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCC
Confidence 5667899999988775 4679999999999976554 456777788888999998876665433
Q ss_pred -----CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 040324 207 -----ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 207 -----~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE 277 (488)
..+..++++|++.+++.+++. +...++||+||++++.|.+.| +++|+++|++||++||+||
T Consensus 172 ~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DE 241 (428)
T PRK12389 172 PKSIAQEVITVPFNDIEALKEALDKW----------GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDE 241 (428)
T ss_pred CCcccCceEEcCCCCHHHHHHHHHhc----------CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 134556788999999988752 136899999999999999887 9999999999999999999
Q ss_pred cccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhh---CCCCcccCCCCHHHHHHH
Q 040324 278 AHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYN---CPAHLYATSISPPAAEQI 351 (488)
Q Consensus 278 ~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~---~~~~~~~~~~~p~~~aa~ 351 (488)
||+ +| |++.+ ..+++|+.| ||+ |++|++|++ .|++++++++++.+... .++.||+ +||+.|+++
T Consensus 242 V~t--G~-Rt~~~~a~~~~gv~P---Div--t~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~--gnpl~~Aaa 311 (428)
T PRK12389 242 VIT--AF-RFMYGGAQDLLGVEP---DLT--ALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMA--GNPASMAAG 311 (428)
T ss_pred ccc--cc-ccCcchhhHHhCCCC---Cee--eechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCc--cCHHHHHHH
Confidence 999 88 88765 678899988 776 999999763 37789999999988532 2333444 999999999
Q ss_pred HHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCc-------------chHHHH
Q 040324 352 ISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNP-------------AKVSSF 414 (488)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 414 (488)
+++|++++ .+++.+++++++++|+++|+++ ++.........++.+.+... .....+
T Consensus 312 la~L~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 384 (428)
T PRK12389 312 IACLEVLQ-------QEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKF 384 (428)
T ss_pred HHHHHHHh-------cccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHH
Confidence 99999984 3468889999999999999864 43221112223666655321 124578
Q ss_pred HHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 415 SRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 415 ~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.+.|+++||++.+.++ +. +.|++.+|++|||++++++++++++
T Consensus 385 ~~~l~~~Gv~~~~~~~-------~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 385 FKLMLNQGINLAPSKY-------EA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHCCcEeecCCC-------CC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 8999999999985332 12 3478899999999999999999865
No 66
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=338.52 Aligned_cols=355 Identities=15% Similarity=0.166 Sum_probs=269.7
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|..+++++|+|+||.| |++||||.+ .....+||+||++.+|+++|+++...... .....+
T Consensus 24 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~---~~~~~~ 85 (449)
T PRK07481 24 PPIIIVRGDGVYVYDID---------------GKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYST---FDGTTH 85 (449)
T ss_pred CCceEEeccccEEEeCC---------------CCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceec---ccccCC
Confidence 46778999999999999 999999954 55678999999999999999998643321 111245
Q ss_pred hhHHHHHHHHHHHhC---CCCeEEeCCcHHHHhhhhhcc---c------CCCcEEEEeCCCchHHHHHHHhcCCe-----
Q 040324 146 ALHNELEECVARFVG---KPAAIVFGMGYVTNSSILPVL---M------GKGSLIISDSLNHNSIVNGARGSGAT----- 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g---~~~~i~~~sGs~a~~~~~~~~---~------~~~~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (488)
+...++.++|++.++ .+++++.+||++|++.+++.. + ++..+|.+...+|+.+..++..++..
T Consensus 86 ~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~ 165 (449)
T PRK07481 86 PRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRN 165 (449)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccc
Confidence 777899999999874 357899999999997766543 2 35567788889999887666544311
Q ss_pred -------EEEe--------eCC--CHHHHHHHHH----HHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHH
Q 040324 209 -------IRVF--------QHN--TPSHLEEVLR----EQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEII 263 (488)
Q Consensus 209 -------v~~~--------~~~--d~~~Le~~l~----~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~ 263 (488)
+..+ +.| |.+++++.+. +.+... .+...++||+|||++.+|.+.+ +++++
T Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~-----~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr 240 (449)
T PRK07481 166 YEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQ-----GPDTIAAFIAEPVQGAGGVIVPPANFWPLVR 240 (449)
T ss_pred cCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhc-----CCCcEEEEEEecccCCcCCccCCHHHHHHHH
Confidence 1112 123 5555544332 222110 1247899999999999998775 99999
Q ss_pred HHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh------
Q 040324 264 TICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN------ 333 (488)
Q Consensus 264 ~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~------ 333 (488)
++|++||++||+|||++ +|||+|.+ .++++|+.| ||+ +++|++|++ .|++++++++++.+...
T Consensus 241 ~lc~~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~ 313 (449)
T PRK07481 241 EVCDRHGILLIADEVVT--GFGRTGSWFGSRGWGVKP---DIM--CLAKGITSGYVPLGATMVNARIADAFEANADFGGA 313 (449)
T ss_pred HHHHHcCCEEEEeehhh--CcCcCchhhHhhhcCCCC---CEE--EEeecccCCCcCceEEEEcHHHHHHHhccCccccc
Confidence 99999999999999999 99999987 788899998 777 899999763 38899999999988642
Q ss_pred -CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecC--CCCCCeEEEEeCCc
Q 040324 334 -CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMVYNP 408 (488)
Q Consensus 334 -~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~ 408 (488)
.+++||+ +||+.|++++++|+++ ..+++.+++++++++|++.|+++ ..+++. ...+.++.+.+..+
T Consensus 314 ~~h~~T~~--gnpl~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~ 384 (449)
T PRK07481 314 IMHGYTYS--GHPVACAAALATLDIV-------VREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVAD 384 (449)
T ss_pred cccCCCCC--CCHHHHHHHHHHHHHH-------HhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEeccc
Confidence 2444555 9999999999999998 44678899999999999999876 222222 12346667766321
Q ss_pred -----------chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 409 -----------AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 409 -----------~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.....+.+.|+++|+++.+.+ +.+||+||+.+|++|||+++++++++++++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g--------~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 385 KATREPIDPSKGYANAVADVARENGVLVRPSG--------TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred ccccCCCCchhHHHHHHHHHHHhCCeEEEecC--------CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 124578889999999997422 4689999999999999999999999998764
No 67
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=339.84 Aligned_cols=351 Identities=16% Similarity=0.174 Sum_probs=265.4
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||.+ .....+||+||++.+|+.+|+++....+.. ....
T Consensus 32 ~~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~---~~~~ 93 (466)
T PRK07036 32 EGSLVIVEAEGIYVTDAD---------------GRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPF---GDMT 93 (466)
T ss_pred CCCceEEeCceeEEEECC---------------CCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccc---cccC
Confidence 346778999999999999 999999954 456789999999999999999986433321 1024
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe-----
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT----- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~----- 208 (488)
++...+|.++|++..+. +.+++.+||++|++.+++.. +++..+|.+...+|+.+..+...++..
T Consensus 94 ~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~ 173 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTE 173 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccccc
Confidence 56678999999998754 57899999999997766643 235566777888999887666554321
Q ss_pred -------EEEeeCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hH
Q 040324 209 -------IRVFQHNT-----------------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LP 260 (488)
Q Consensus 209 -------v~~~~~~d-----------------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~ 260 (488)
+..++..+ .+.+++.+.. ..+...++||+||+++..|.+.| ++
T Consensus 174 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~---------~~~~~iAavi~EPv~g~gG~~~p~~~yl~ 244 (466)
T PRK07036 174 FDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS---------LGADNIAAFIAEPILGSGGVIVPPPGYHA 244 (466)
T ss_pred ccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH---------cCCCceEEEEEeCCcCCCCCccCCHHHHH
Confidence 22222111 1233443332 11347899999999999998876 99
Q ss_pred HHHHHHHHcCcEEEEEccccccccCCCCCC-cch-hcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh--
Q 040324 261 EIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCE-LLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN-- 333 (488)
Q Consensus 261 ~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~-~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~-- 333 (488)
+|+++|++||+++|+|||++ +|||+|.. .++ ++|+.| ||+ |++|++|++ .|++++++++++.+...
T Consensus 245 ~lr~lc~~~g~llI~DEV~t--GfGRtG~~~~~~~~~gv~P---Div--t~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~ 317 (466)
T PRK07036 245 RMREICRRYDILYISDEVVT--GFGRLGHFFASEAVFGIQP---DII--TFAKGLTSGYQPLGAVIISERLLDVISGPNA 317 (466)
T ss_pred HHHHHHHHcCCEEEEeechh--CCCcCchhhhhhhhcCCCC---CEE--EEccccccCccccEEEEEcHHHHHHHhcccC
Confidence 99999999999999999999 99999975 555 789998 777 999999763 38889999999988632
Q ss_pred -----CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeec--CCCCCCeEEEEe
Q 040324 334 -----CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVL--GDNDSPVMPIMV 405 (488)
Q Consensus 334 -----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~ 405 (488)
.+++||+ +||+.|++++++|++++ .+++.+++++++++|+++|+++ ..+++ ....+.++.+.+
T Consensus 318 ~~~~~~~~~T~~--gnpl~~aaa~a~Le~i~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~ 388 (466)
T PRK07036 318 KGNVFTHGFTYS--GHPVACAAALKNIEIME-------REGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVEC 388 (466)
T ss_pred cCcccccCCCCC--CCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEE
Confidence 2444555 99999999999999983 3568899999999999999875 11111 112346667766
Q ss_pred CCcc-----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 406 YNPA-----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 406 ~~~~-----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
..+. ....+.+.|+++||++.+. + +.+||+||+.+|++|||+++++++++++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-------~-~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 389 VADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL-------E-HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred ccCccccCCCCchhHHHHHHHHHHHHCCcEEeec-------C-CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 4211 2357888999999998742 1 579999999999999999999999999876
No 68
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1e-40 Score=341.01 Aligned_cols=349 Identities=14% Similarity=0.129 Sum_probs=268.6
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|..+.+++|+|+||.| |++||||.++ ....+||+||++.+|+.+|++++..... ....+
T Consensus 38 ~p~~i~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~----~~~~~ 98 (460)
T PRK06916 38 DPLIIERGEGRKLYDVN---------------GNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTL----LGLAN 98 (460)
T ss_pred CCeeEEeccccEEEeCC---------------CCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccc----cccCC
Confidence 46778999999999999 9999999544 5567899999999999999998644321 11245
Q ss_pred hhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe------
Q 040324 146 ALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT------ 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~------ 208 (488)
+...+|.++|++.++. +++++++||++|++.+++.. +++..+|.+...+|+.+..++.+++..
T Consensus 99 ~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~ 178 (460)
T PRK06916 99 VPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVY 178 (460)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccccccc
Confidence 6678999999998864 57999999999997766543 345667888889999988777665421
Q ss_pred ------EEEeeCC-----------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-cCCCCCCCCC----hH
Q 040324 209 ------IRVFQHN-----------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-IYSMEGELCK----LP 260 (488)
Q Consensus 209 ------v~~~~~~-----------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v~s~~G~~~~----l~ 260 (488)
+..++.. +++.+++.++.. +.+.++||+|| |++.+|.+.+ |+
T Consensus 179 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~iAAvi~EP~iqg~gG~~~~~~~fl~ 248 (460)
T PRK06916 179 SSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK----------HEEIAAIIVEPLVQGAGGMITMPKGYLK 248 (460)
T ss_pred CCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC----------CCcEEEEEEeccccCCCCcccCCHHHHH
Confidence 1122211 234455555431 24789999999 6999998763 99
Q ss_pred HHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhh---
Q 040324 261 EIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYN--- 333 (488)
Q Consensus 261 ~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~--- 333 (488)
+++++|++||++||+|||++ +|||+|.+ +.+++|+.| ||+ +++|++|++ -|++++++++++.+...
T Consensus 249 ~lr~lc~~~g~llI~DEV~T--G~GRtG~~~a~~~~gv~P---Div--~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~ 321 (460)
T PRK06916 249 GLRNLCTKYNVLFITDEVAT--GFGRTGKMFACEHENVTP---DIM--TAGKGLTGGYLPIAITVTTDEIYNAFYGDYEE 321 (460)
T ss_pred HHHHHHHHcCCEEEeechhh--CCCcCchhhHHHhcCCCC---Cee--eeehhhhcCccccceeeecHHHHHHhhccccc
Confidence 99999999999999999999 99999988 788999998 777 899999754 28899999999887531
Q ss_pred ----CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecC--CCCCCeEEEEeC
Q 040324 334 ----CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLG--DNDSPVMPIMVY 406 (488)
Q Consensus 334 ----~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~--~~~~~~~~~~~~ 406 (488)
.+++||+ +||+.|++++++|+++. .+++.+++++++++|++.|+++. .+.+. ...+.++.+.+.
T Consensus 322 ~~~~~~~~T~~--gnpl~~aaa~a~l~~l~-------~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~ 392 (460)
T PRK06916 322 QKTFFHGHSYT--GNPLGCAVALANLELYE-------KTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELV 392 (460)
T ss_pred cCccccCCCCC--CCHHHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEee
Confidence 2444555 89999999999999983 45688999999999999998761 11111 123466666664
Q ss_pred Ccc-----------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 407 NPA-----------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 407 ~~~-----------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.+. ....+.+.|+++||++.+. .+.+||.||+.+|++|||+++++++++++++-
T Consensus 393 ~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--------g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 393 KNKETKEPFEWTERVGVQVCKRSRELGMLTRPL--------GNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred cccccccCCCchhhHHHHHHHHHHHCCeEEEec--------CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 221 1347889999999999742 16899999999999999999999999998753
No 69
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.5e-40 Score=336.46 Aligned_cols=353 Identities=14% Similarity=0.142 Sum_probs=269.5
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||. +.....+||+||++.+|+++|+++.+..+.. ...
T Consensus 16 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~----~~~ 76 (412)
T TIGR02407 16 SFPTVFEKAKGSTLWDED---------------GKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSL----DMA 76 (412)
T ss_pred CCCceEEecccCEEEeCC---------------CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceecc----ccC
Confidence 567789999999999999 99999994 4566789999999999999999975443321 123
Q ss_pred hhhHHHHHHHHHHHh--C--CC-CeEEe-CCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC--------
Q 040324 145 LALHNELEECVARFV--G--KP-AAIVF-GMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA-------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~--g--~~-~~i~~-~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~-------- 207 (488)
++...+|.++|++.+ + .. +++++ +||++|++.+++ ..+++..+|.+...+|+.+..++..++.
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 156 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAG 156 (412)
T ss_pred cHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCC
Confidence 566688999998874 2 22 45565 799999966554 4457777788889999999887766542
Q ss_pred ----eEEEeeC--------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCc
Q 040324 208 ----TIRVFQH--------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKA 271 (488)
Q Consensus 208 ----~v~~~~~--------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~ 271 (488)
.+..+|. ++++.+++.+.+... .+...++||+||+++++|.+. ++++|+++|++||+
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~ 229 (412)
T TIGR02407 157 VPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS-------GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDI 229 (412)
T ss_pred CCCCCeEECCCCCccccchhHHHHHHHHHHhccC-------CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 2233443 236667777754210 113578999999999999855 39999999999999
Q ss_pred EEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHH
Q 040324 272 YTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPA 347 (488)
Q Consensus 272 ~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~ 347 (488)
+||+||+|+ +|||+|.+ ..+++++.| |++ +++|++|+.| |++++++++ +.+....+..+++ +||+.
T Consensus 230 llI~DEV~t--G~GRtG~~~a~~~~~v~P---Di~--~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~--gnpl~ 299 (412)
T TIGR02407 230 LLIVDDIQA--GCGRTGTFFSFEPAGIEP---DIV--CLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFR--GNNLA 299 (412)
T ss_pred EEEEechhh--CCCccchhHHhcccCCCC---CEE--EechhccCCccceeEEEEchhh-hccCCCccCCCCC--ccHHH
Confidence 999999999 99999988 678889988 666 8999998744 889998876 5554344555555 99999
Q ss_pred HHHHHHHHHH-HhccCCCchHHHHHHHHHHHHHHHHHHHHhC----C-CeecCCCCCCeEEEEeCCcchHHHHHHHHHHC
Q 040324 348 AEQIISAIQV-VIGEDGSCRGAQKLARIRENSNFFRSKLQKM----G-FEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ 421 (488)
Q Consensus 348 ~aa~~a~L~~-i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 421 (488)
|+++.++|++ + ..+++.+++++.+++++++|+++ + +.......+.++++.+........+.+.|+++
T Consensus 300 ~aaa~a~l~~~i-------~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~ 372 (412)
T TIGR02407 300 FVTATAALEYYW-------SDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAFEN 372 (412)
T ss_pred HHHHHHHHHHHh-------cccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChHHHHHHHHHHHHC
Confidence 9999999996 5 33567888888889998888753 2 22222334678888887665667899999999
Q ss_pred CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 422 NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 422 Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
||++.+.+ ...+.+||+||+.+|++|+|+++++|++++++
T Consensus 373 Gv~v~~~~-----~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 373 GLIIETSG-----PNDEVIKLLPPLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCEEeccC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHhC
Confidence 99997422 12478999999999999999999999998753
No 70
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-40 Score=334.99 Aligned_cols=353 Identities=13% Similarity=0.149 Sum_probs=270.0
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
|..+.+++|+|+||.| |++||||.+ ...+.+||+||++.+|+++|++++..... ....++
T Consensus 23 p~~i~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~----~~~~~~ 83 (425)
T PRK07495 23 QIYADRAENAEIWDKE---------------GRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH----QVVPYE 83 (425)
T ss_pred CeeEEeeeecEEEeCC---------------CCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc----CccCCH
Confidence 6778999999999999 999999954 45578999999999999999998643221 112456
Q ss_pred hHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC-------------
Q 040324 147 LHNELEECVARFVGK---PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA------------- 207 (488)
Q Consensus 147 ~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~------------- 207 (488)
...+|.++|++.++. +++++.+||++|++.+++ ..+++..+|.+...+|+.+..+..+++.
T Consensus 84 ~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 163 (425)
T PRK07495 84 NYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMP 163 (425)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCC
Confidence 678899999998864 478999999999976554 4567777888889999998776654432
Q ss_pred eEEEeeCCC----------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEE
Q 040324 208 TIRVFQHNT----------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYT 273 (488)
Q Consensus 208 ~v~~~~~~d----------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~l 273 (488)
.+..++.++ ++++++.+.+.. .+...++||+||+++.+|.+. ++++|+++|++||+++
T Consensus 164 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~--------~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~ll 235 (425)
T PRK07495 164 DVYHVPFPVELHGVSVEQSLAALDKLFKADV--------DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILL 235 (425)
T ss_pred CeEEecCCcccccccHHHHHHHHHHHHHhcc--------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 123334332 334455543210 123689999999999988654 3999999999999999
Q ss_pred EEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHH
Q 040324 274 YLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQ 350 (488)
Q Consensus 274 i~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa 350 (488)
|+||+|+ +||++|.+ ..+++++.| ||+ ||||+++++ .|++++++++++.+....+..+++ ++|+.+++
T Consensus 236 I~DEv~t--G~gr~G~~~a~~~~gv~p---Di~--tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~--~~pl~~aa 306 (425)
T PRK07495 236 IADEVQT--GFARTGKLFAMEHHEVAA---DLT--TMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYG--GNPLGIAA 306 (425)
T ss_pred EEechhh--cCCcCCCceeecccCCCC---CEE--eehhhhcCCccceEEEEcHHHHhccCCCCcCCCCC--CCHHHHHH
Confidence 9999999 89999987 677788887 666 999999753 399999999999887655555555 99999999
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCC--CCCCeEEEEeCCc-------chHHHHHHHHH
Q 040324 351 IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGD--NDSPVMPIMVYNP-------AKVSSFSRECL 419 (488)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~~l~ 419 (488)
++++|++++ .+++.+++++++++|+++|+++ .++.... ..+.++++.+..+ .....+.+.|+
T Consensus 307 a~a~l~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~ 379 (425)
T PRK07495 307 AHAVLDVIE-------EEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKAL 379 (425)
T ss_pred HHHHHHHHH-------hchHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHH
Confidence 999999983 3568888999999999998875 1221111 2357777777432 12457888999
Q ss_pred HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 420 KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 420 ~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
++|+++...+ +. .+.+||+||+.+|++|+|+++++|+++++++.
T Consensus 380 ~~Gvl~~~~g----~~-~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 380 EKGLILLTCG----VH-GNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred HCCeEEeecC----CC-CCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 9999987422 11 37899999999999999999999999998764
No 71
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=335.93 Aligned_cols=343 Identities=15% Similarity=0.160 Sum_probs=266.6
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||.|+ ....+||+||.+.+|+.+|+++...... ...
T Consensus 12 ~~~~~~~~~~G~~~~d~d---------------G~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-----~~~ 71 (389)
T PRK01278 12 RADLAFERGEGVWLIDED---------------GERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN-----LYR 71 (389)
T ss_pred CCCceEEeeecCEEEECC---------------CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcccc-----ccC
Confidence 457788999999999999 9999999653 4456777899999999999988432221 124
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCe-------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGAT------- 208 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~------- 208 (488)
++...+++++|+++.+.+++++++||++|+..+++++ .++.++|..+..+|+.+..+...++..
T Consensus 72 ~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~ 151 (389)
T PRK01278 72 IPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFG 151 (389)
T ss_pred ChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCC
Confidence 6777899999999987788999999999998877665 334456667777888777666554432
Q ss_pred -----EEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEccc
Q 040324 209 -----IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLDEAH 279 (488)
Q Consensus 209 -----v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~~ 279 (488)
+..++++|++++++.+.+ +.++|+++++++++|... ++++|+++|++||++||+||+|
T Consensus 152 ~~~~~~~~~~~~d~~~l~~~l~~-------------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~ 218 (389)
T PRK01278 152 PLVPGFDQVPFGDIEALKAAITP-------------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQ 218 (389)
T ss_pred CCCCCceEeCCCCHHHHHHhhCC-------------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 224567899999988753 567888999999998544 5999999999999999999999
Q ss_pred cccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHH
Q 040324 280 SIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQ 356 (488)
Q Consensus 280 s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (488)
+ ++|++|++ ..+++++.| |++ ||||+++++ .|++++++++++.+....+.++++ ++|+.+++++++|+
T Consensus 219 ~--g~g~~g~~~~~~~~~~~p---di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~ 289 (389)
T PRK01278 219 C--GMGRTGKLFAHEWAGVTP---DIM--AVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTYG--GNPLAMAVGNAVLD 289 (389)
T ss_pred c--CCCcCCcceeecccCCCC---CEE--EEehhccCCcceEEEEEcHHHHhccCCCCCCCCCC--ccHHHHHHHHHHHH
Confidence 9 89999986 456778877 655 999999842 389999999998887666666665 99999999999999
Q ss_pred HHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Ce-ecC--CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCC
Q 040324 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FE-VLG--DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFP 431 (488)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 431 (488)
.++ .++..+++++++++++++|+++. .+ +.. ...+.++++.+.. ...+++++|+++||.+.|.
T Consensus 290 ~l~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~--~~~~~~~~l~~~GV~~~p~--- 357 (389)
T PRK01278 290 VIL-------APGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV--PNRDLVQALRDEGLLTVGA--- 357 (389)
T ss_pred HHh-------hhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec--CHHHHHHHHHHCCeEEeec---
Confidence 873 34567788888888888887641 11 111 2234555655532 4678999999999998852
Q ss_pred CccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 432 ATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+.+++||+|++.+|++++++++++|++++++
T Consensus 358 ----~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 358 ----GDNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred ----CCCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 2478999999999999999999999998865
No 72
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-40 Score=335.13 Aligned_cols=358 Identities=13% Similarity=0.152 Sum_probs=266.5
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||.| ...+.+||+||++.+|+++|+++...... . ...
T Consensus 39 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~---~~~ 99 (459)
T PRK06931 39 KLPLAIAKAQGVWVTDVE---------------GNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-L---DLT 99 (459)
T ss_pred CCCceEEeccccEEEeCC---------------CCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-c---ccC
Confidence 457788999999999999 999999954 46678999999999999999987321111 0 124
Q ss_pred hhhHHHHHHHHHHHhCCC----CeEEe-CCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC---------
Q 040324 145 LALHNELEECVARFVGKP----AAIVF-GMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA--------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~----~~i~~-~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~--------- 207 (488)
++...+|.++|++.++.. ..+++ +||++|++.+++ ..+++..+|.+...+|+.+..++..++.
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~ 179 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNG 179 (459)
T ss_pred CHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCC
Confidence 566788999999988632 34455 799999966554 4567878888889999998877765431
Q ss_pred ---eEEEeeCC-------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHH
Q 040324 208 ---TIRVFQHN-------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICK 267 (488)
Q Consensus 208 ---~v~~~~~~-------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~ 267 (488)
.+..++.+ +.+.+++.+++.+.+.. ..+...++||+||+++.+|.+.+ |++++++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~ 256 (459)
T PRK06931 180 LMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVE---SGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQ 256 (459)
T ss_pred CCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhh---cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 12223322 23444444444332100 01236899999999999998764 999999999
Q ss_pred HcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccCCCC
Q 040324 268 RYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYATSIS 344 (488)
Q Consensus 268 ~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (488)
+||++||+|||++ +|||+|.+ +++++|+.| ||+ |++|++|++- |++++++++ +.+....++.||+ +|
T Consensus 257 ~~g~LlI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--t~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~~--gn 326 (459)
T PRK06931 257 KHGILLIVDEVQA--GFARTGKMFAFEHAGIEP---DII--VMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTFR--GN 326 (459)
T ss_pred HcCCEEEEecchh--cCCcCchHHHhhhcCCCC---CEE--EecccccCCcceeeeeeHHHH-hhccCCCCCCCCC--CC
Confidence 9999999999999 99999987 788999998 777 9999997632 777777664 6664444555665 99
Q ss_pred HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecC--CCCCCeEEEEeCCc------------
Q 040324 345 PPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMVYNP------------ 408 (488)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~------------ 408 (488)
|+.|++++++|++++ .+++.+++++++++|+++|+++ ..+++. ...+.++.+.+..+
T Consensus 327 pla~aaala~L~~l~-------~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~ 399 (459)
T PRK06931 327 QLAMATGLTTLKILK-------EENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPA 399 (459)
T ss_pred HHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCc
Confidence 999999999999983 4568889999999999999875 122222 22356677776422
Q ss_pred --chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 409 --AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 409 --~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.....+.+.|+++|+++.+.+ ...+.+||.||+.+|++|+|++++++++++.++
T Consensus 400 ~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 455 (459)
T PRK06931 400 DGELAAAIQKACFENGLLLERGG-----RNGNVVRLLPPLLITQAECEEFIDRFEQALLAA 455 (459)
T ss_pred cHHHHHHHHHHHHHCCcEEeecC-----CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHH
Confidence 123468888999999997422 123789999999999999999999999999764
No 73
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=7.2e-40 Score=334.10 Aligned_cols=358 Identities=15% Similarity=0.148 Sum_probs=265.4
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||.| .....+||+||++.+|+.+|+++....+. ..-.
T Consensus 20 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~----~~~~ 80 (442)
T TIGR00709 20 KLPTAFAKAQGCWVTDVE---------------GKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT----LDLT 80 (442)
T ss_pred CCCceEEeccccEEEeCC---------------CCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc----cccC
Confidence 467788999999999999 999999954 46678999999999999999988432221 1124
Q ss_pred hhhHHHHHHHHHHHhCC----CCeEEe-CCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC---------
Q 040324 145 LALHNELEECVARFVGK----PAAIVF-GMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA--------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~----~~~i~~-~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~--------- 207 (488)
++...+|.++|++.++. .+.+++ +||++|++.+++ .++++..+|.+...+|+.+...+.+++.
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~ 160 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGM 160 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCC
Confidence 56778999999998863 244554 899999966554 4567778888899999998887776541
Q ss_pred ---eEEEeeCCC-------------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHH
Q 040324 208 ---TIRVFQHNT-------------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICK 267 (488)
Q Consensus 208 ---~v~~~~~~d-------------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~ 267 (488)
.+..++.++ .+.+.+.+++.+.+.. ..+...++||+|++++..|.+. ++++|+++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~ 237 (442)
T TIGR00709 161 LMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVE---SGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTR 237 (442)
T ss_pred CCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhc---cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 122223221 2223333333221100 0123689999999999988775 3999999999
Q ss_pred HcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccCCCC
Q 040324 268 RYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYATSIS 344 (488)
Q Consensus 268 ~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (488)
+||++||+||||+ +|||+|.+ ..+++++.| ||+ +++|++|++- |+++++++ ++.+....+..+|+ +|
T Consensus 238 ~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~~--gn 307 (442)
T TIGR00709 238 KHDIKLILDEVQA--GFGRSGTMFAFEHAGIEP---DFV--VMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTFR--GN 307 (442)
T ss_pred HcCCEEEEecccc--CCCCCCchhHHHHcCCCC---cEE--EEcccccCCcccEEEEEchH-HhccCCCcCCCCCC--cC
Confidence 9999999999999 99999987 678899988 777 7999998722 88888887 45543333444555 99
Q ss_pred HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCC--CCCCeEEEEeCCcc-----------
Q 040324 345 PPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGD--NDSPVMPIMVYNPA----------- 409 (488)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~~~----------- 409 (488)
|++|++++++|+++. .+++.+++++++++|++.|+++ ..+.+.+ ..+.++.+.+..+.
T Consensus 308 pla~aaa~a~L~~i~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~ 380 (442)
T TIGR00709 308 QLAMVTGTEALNYWK-------DDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPR 380 (442)
T ss_pred HHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCc
Confidence 999999999999983 3568889999999999999875 2222222 23466777664321
Q ss_pred ---hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 410 ---KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 410 ---~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
....+...|+++|+++.+.+ ...+.+||.||+.+|++|+|+++++++++++++
T Consensus 381 ~~~~~~~~~~~~~~~Gvl~~~~~-----~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 381 DCELAAAIQGACFENGLLLETGG-----REGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred chHHHHHHHHHHHHCCeEEeecC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 24568888999999987422 123789999999999999999999999999775
No 74
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-40 Score=333.34 Aligned_cols=351 Identities=17% Similarity=0.239 Sum_probs=268.1
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||.+ .....+||+||++.+|+.+|+++....... . -.
T Consensus 35 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~---~-~~ 95 (441)
T PRK05769 35 WYPLVIERGEGVWVEDVD---------------GNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLT---D-FY 95 (441)
T ss_pred CCCeeEEecceEEEEeCC---------------CCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCc---c-cC
Confidence 456778999999999999 999999954 566789999999999999999985432211 0 13
Q ss_pred hhhHHHHHHHHHHHhC---CCCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC-----------
Q 040324 145 LALHNELEECVARFVG---KPAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA----------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g---~~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~----------- 207 (488)
++...+|.++|++.++ .+++++++||++|++.+++ ..+++..+|.+...+|+.+...+..++.
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~ 175 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPL 175 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCC
Confidence 5667899999999886 3578999999999976554 4567777888888999998877665432
Q ss_pred --eEEEeeCC----------CH--------HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHH
Q 040324 208 --TIRVFQHN----------TP--------SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEII 263 (488)
Q Consensus 208 --~v~~~~~~----------d~--------~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~ 263 (488)
.+..+++. +. +.+++.+.+.. ..+...++||+||+++++|.+.| |++|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~-------~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~ 248 (441)
T PRK05769 176 MPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKL-------VPPEEVAAIIVEPIQGEGGYVVPPKNFFKELR 248 (441)
T ss_pred CCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhc-------cCCCceEEEEECcccCCCCCcCCCHHHHHHHH
Confidence 12222221 11 22333221100 01236899999999999999888 99999
Q ss_pred HHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCccc
Q 040324 264 TICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYA 340 (488)
Q Consensus 264 ~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~ 340 (488)
++|++||+++|+||+|+ ++|++|.+ .++++++.| |++ +|+|++|++ .|++++++++++.. ...++.+|+
T Consensus 249 ~l~~~~g~lli~DEv~t--G~gr~G~~~a~~~~gv~p---Div--t~~K~l~~G~p~gav~~~~~i~~~~-~~~~~~T~~ 320 (441)
T PRK05769 249 KLADKYGILLIDDEVQT--GMGRTGKMFAIEHFGVEP---DII--TLAKAIAGGLPLGAVIGRAELMFLP-PGSHANTFG 320 (441)
T ss_pred HHHHHcCCEEEEechhh--CCCcccceehhhccCCCC---CEE--EEcccccCCcccEEEEEehhhhhcC-CCCCCCCCC
Confidence 99999999999999999 89999987 678889987 777 899999853 48899999988643 234555665
Q ss_pred CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeecCC--CCCCeEEEEeCCc------ch
Q 040324 341 TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEVLGD--NDSPVMPIMVYNP------AK 410 (488)
Q Consensus 341 ~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~~--~~~~~~~~~~~~~------~~ 410 (488)
++|+.+++++++|+++ +. ++.+++++++++|++.|+++. .++... ..+.++.+.+..+ ..
T Consensus 321 --g~p~~~aaa~a~L~~l-------~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~ 390 (441)
T PRK05769 321 --GNPVAAAAALATLEEL-------EE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKL 390 (441)
T ss_pred --cCHHHHHHHHHHHHHH-------HH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHH
Confidence 8999999999999998 34 889999999999999998762 332222 2346677766432 23
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
...+.+.|+++||++.+. +.+.+||+|++.+|++|||++++++++++.++
T Consensus 391 ~~~~~~~~~~~Gil~~~~-------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 391 RDKVLYEAFKRGLLLLGA-------GKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHhCCcEEecC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 557888999999998742 23689999999999999999999999998764
No 75
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=1.8e-39 Score=325.68 Aligned_cols=347 Identities=24% Similarity=0.385 Sum_probs=282.5
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHc-------CCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKY-------SHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGY 171 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~-------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs 171 (488)
..+++||+||+|||+..+ |++.+++.++++++ +.+.++++...|..+.++++|+.+|++++.++++++++|+
T Consensus 3 ~~~~~~~~s~~YL~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~ 81 (370)
T PRK05937 3 ESLSIDFVTNDFLGFSRS-DTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGY 81 (370)
T ss_pred CCceEEeECCCccCCCCC-HHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChH
Confidence 356899999999999975 88999999999998 5788889989999999999999999999999999999999
Q ss_pred HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC
Q 040324 172 VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS 251 (488)
Q Consensus 172 ~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s 251 (488)
.+|..++..+.++++.|+++..+|+++..+++........++++|+++|+++|++.... +.++.+|+++++++
T Consensus 82 ~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-------~~~~~~v~v~~v~s 154 (370)
T PRK05937 82 MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRHNDLDHLESLLESCRQR-------SFGRIFIFVCSVYS 154 (370)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHhhhcc-------CCCcEEEEEecCCC
Confidence 99987777777889999999999999999988776666778999999999999753111 12456778899999
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHH
Q 040324 252 MEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLK 331 (488)
Q Consensus 252 ~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~ 331 (488)
++|.+.|+++|+++|+++|+++++||+|+.|.+|++|.+....++.+ +.++++.||||++|+.|+.+++.+++.+.+.
T Consensus 155 ~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~--~~~~~~~tlsK~~g~~G~~vl~~~~~~~~~~ 232 (370)
T PRK05937 155 FKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYE--NFYAVLVTYSKALGSMGAALLSSSEVKQDLM 232 (370)
T ss_pred CCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCC--CCcEEEEechhhhhcCceEEEcCHHHHHHHH
Confidence 99999999999999999999999999999999999998866556653 2346677999999988866777777777666
Q ss_pred hhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchH
Q 040324 332 YNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKV 411 (488)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (488)
....++.++.+.+|+.++++.++++.+.. ..+...++++++.++|++.|...+ .++..++.+.. ...
T Consensus 233 ~~~~~~~~s~~~~~~~~~a~~aal~~l~~-----~~~~~~~~l~~l~~~l~~~l~~~~-------~~~~~~i~~~~-~~~ 299 (370)
T PRK05937 233 LNSPPLRYSTGLPPHLLISIQVAYDFLSQ-----EGELARKQLFRLKEYFAQKFSSAA-------PGCVQPIFLPG-ISE 299 (370)
T ss_pred HhCCCCeecCCCCHHHHHHHHHHHHHHHh-----CcHHHHHHHHHHHHHHHHhcCCCC-------CCCEEEEEeCC-hhH
Confidence 44455666667888888888899998843 224567788888888888775421 12344555543 345
Q ss_pred HHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccC
Q 040324 412 SSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYF 472 (488)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~ 472 (488)
..+.+.|.++||.+....+|.. +.+|++++..+|+||+|+++++|++++++++.+.-
T Consensus 300 ~~~~~~L~~~gi~v~~~~~~~~----~~iRis~~~~~t~edid~l~~~L~~~~~~~~~~~~ 356 (370)
T PRK05937 300 QELYSKLVETGIRVGVVCFPTG----PFLRVNLHAFNTEDEVDILVSVLATYLEKYQKNVV 356 (370)
T ss_pred HHHHHHHHHCCeeEEeeCCCCC----CEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCcc
Confidence 6788889999998886655533 57999999999999999999999999998876643
No 76
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=8.1e-40 Score=332.88 Aligned_cols=353 Identities=16% Similarity=0.138 Sum_probs=270.2
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||.+ .....+||+||.+.+|+.+|+++...... .+..
T Consensus 22 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~----~~~~ 82 (443)
T PRK08360 22 YYPLVPVKAENAKVWDIE---------------GNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTP----IYGF 82 (443)
T ss_pred cCCceEEecceeEEEECC---------------CCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccc----cccC
Confidence 456778999999999999 999999954 46678999999999999999998644331 1234
Q ss_pred hhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC------------
Q 040324 145 LALHNELEECVARFVGK--PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA------------ 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~------------ 207 (488)
++...+|.++|++.++. ++++|++||++|++.+++ .++++..++.....+|+.+..+...++.
T Consensus 83 ~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 162 (443)
T PRK08360 83 PVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELS 162 (443)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCC
Confidence 56678999999998865 578999999999966554 4567777888888999988776665442
Q ss_pred eEEEeeCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHH
Q 040324 208 TIRVFQHNT-----------------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITIC 266 (488)
Q Consensus 208 ~v~~~~~~d-----------------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~ 266 (488)
.+..+++++ ++.+++.++... .+.+.++|++||+++++|.+.+ +++|+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~ 234 (443)
T PRK08360 163 DVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV--------YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKIL 234 (443)
T ss_pred CcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc--------CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 122233221 233444443210 0236899999999999997665 99999999
Q ss_pred HHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCC
Q 040324 267 KRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSI 343 (488)
Q Consensus 267 ~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (488)
++||++||+||+|+ ++|++|.+ ..+++++.| |++ |+||++|++ .|++++++++++.+....+.+++ ++
T Consensus 235 ~~~g~llI~DEv~~--g~gr~G~~~a~~~~~~~p---Dii--tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~--~~ 305 (443)
T PRK08360 235 DEHGILLVVDEVQS--GLGRTGKWFAIEHFGVEP---DII--TLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTL--SG 305 (443)
T ss_pred HHcCCEEEEecccc--CCCcCccchhhhhcCCCC---CEE--EecccccCCceeEEEEEcHHHHhhhcCCCCCCCC--Cc
Confidence 99999999999999 89999987 567788887 666 899999852 39999999999988755454444 49
Q ss_pred CHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecC--CCCCCeEEEEeCCc--------chH
Q 040324 344 SPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMVYNP--------AKV 411 (488)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~--------~~~ 411 (488)
+|+.+++++++|+.+. .+++.+++++++++|++.|+++ ..++.. ...+.++.+.+..+ ..+
T Consensus 306 ~p~~~aaa~a~l~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~ 378 (443)
T PRK08360 306 NPVASAAALAVIEEIE-------EKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEA 378 (443)
T ss_pred CHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHH
Confidence 9999999999999983 3467889999999999999875 222222 22346666666422 234
Q ss_pred HHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 412 SSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
..+.+.|+++|+++.+.+ .+.+||+||+.+|++|||+++++++++++.+.
T Consensus 379 ~~~~~~l~~~Gi~~~~~~-------~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 379 AKVVWRAWELGLIVTFFS-------GNVLRIQPPLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred HHHHHHHHHCCeEEeecC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 578899999999986421 37899999999999999999999999998873
No 77
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=7.4e-40 Score=332.54 Aligned_cols=345 Identities=15% Similarity=0.195 Sum_probs=272.8
Q ss_pred cccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC
Q 040324 65 DCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 65 ~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (488)
.+++..+.+++|+|+||.| |++||||.| +..+++||+||.+.+|+.+++++++..... -
T Consensus 21 ~~~~~~~~~~~G~~~~d~~---------------g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~-----~ 80 (401)
T PRK00854 21 KPLDVVLTRGEGVWVWDTD---------------GNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRA-----F 80 (401)
T ss_pred CCCCceEEeeeeCEEEECC---------------CCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccc-----c
Confidence 3566788999999999999 999999854 455788999999999999999997553321 1
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc-----------CCCcEEEEeCCCchHHHHHHHhc-------
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM-----------GKGSLIISDSLNHNSIVNGARGS------- 205 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~-----------~~~~~Vl~~~~~h~~~~~~~~~~------- 205 (488)
..+...+|+++++++.+.+++++++||++|++.+++.+. ++.++|.++..+|+++......+
T Consensus 81 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 81 RNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 246778999999999998899999999999988777662 33467888888999876655322
Q ss_pred -----CCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 040324 206 -----GATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLD 276 (488)
Q Consensus 206 -----g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~D 276 (488)
...+..++++|++++++.+.+ +.++|+++++++++|.+.+ |++|+++|++||++||+|
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~-------------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D 227 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITP-------------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD 227 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCC-------------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 134567888999999987753 4568889999999999886 999999999999999999
Q ss_pred ccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHH
Q 040324 277 EAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQII 352 (488)
Q Consensus 277 E~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~ 352 (488)
|+|+ ++|++|.+ ..++.++.| |++ +++|+++++ +|++++++++++.+....+..+++ .+|+.+++++
T Consensus 228 Ev~~--g~g~~g~~~~~~~~g~~~---D~~--~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~--~~~~~~aa~~ 298 (401)
T PRK00854 228 EIQT--GLGRTGKLLAEEHEGIEA---DVT--LIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFG--GNPLACAVAR 298 (401)
T ss_pred chhh--CCCCCchHhHHhhcCCCC---CEE--EecccccCCccCeEEEEEcHHHHhcccCCCCCCCCC--cCHHHHHHHH
Confidence 9998 79998875 345677766 666 578999653 388999999999887555555555 7999999999
Q ss_pred HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC--CCCCCeEEEEeCC-cchHHHHHHHHHHCCceEEeec
Q 040324 353 SAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG--DNDSPVMPIMVYN-PAKVSSFSRECLKQNVAIVTVG 429 (488)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~ 429 (488)
++|+.+. .+++.++++++++++.+.|++++..... ...+.++.+.+.. .....++++.|+++||.+.+.
T Consensus 299 a~L~~l~-------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~- 370 (401)
T PRK00854 299 AALKVLT-------EEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDT- 370 (401)
T ss_pred HHHHHHH-------HcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecC-
Confidence 9999873 2346788999999999999987543221 2235566665533 235678999999999998731
Q ss_pred CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 430 FPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 430 ~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+.+++||+|++.+|++||++++++|++++.
T Consensus 371 ------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 371 ------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 236899999999999999999999998763
No 78
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=330.56 Aligned_cols=347 Identities=16% Similarity=0.155 Sum_probs=270.6
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
++|..+.+++|+|+||.| |++||||. ++....+||+||++.+|+.+|+++...... . ..
T Consensus 21 ~~~~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~-~~ 80 (408)
T PRK04612 21 PRQVVLERGQGSRVWDDQ---------------GREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN----V-FY 80 (408)
T ss_pred CCCceEEEeeeCEEEECC---------------CCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc----c-cC
Confidence 566778999999999999 99999995 456678999999999999999998533221 1 13
Q ss_pred hhhHHHHHHHHHHHhCC-CCeEEeCCcHHHHhhhhhccc------C----CCcEEEEeCCCchHHHHHHHhcCC------
Q 040324 145 LALHNELEECVARFVGK-PAAIVFGMGYVTNSSILPVLM------G----KGSLIISDSLNHNSIVNGARGSGA------ 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~-~~~i~~~sGs~a~~~~~~~~~------~----~~~~Vl~~~~~h~~~~~~~~~~g~------ 207 (488)
++...+|.++|++..+. +++++++||++|++.+++... + +..+|.+...+|+.+..++..++.
T Consensus 81 ~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 160 (408)
T PRK04612 81 SAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEG 160 (408)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 45567899999987753 678999999999977665432 2 234666778899988877655432
Q ss_pred ------eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 040324 208 ------TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 208 ------~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE 277 (488)
.+..++++|++.+++.++. .++++|++||+++.+|.+.+ +++|+++|++||+++|+||
T Consensus 161 ~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DE 228 (408)
T PRK04612 161 YEPLPGGFRYVDFNDVEALEAAMAG------------GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDE 228 (408)
T ss_pred CCCCCCCceEcCCCCHHHHHHhhCC------------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 2244567789988887742 26889999999998887663 9999999999999999999
Q ss_pred cccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHH
Q 040324 278 AHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISA 354 (488)
Q Consensus 278 ~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~ 354 (488)
+|+ ++|++|.. ..+.+++.| |++ ||||++|++ .|++++++++++.+....+.++++ ++|+.++++.++
T Consensus 229 v~t--g~gr~G~~~a~~~~~~~p---di~--t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~--~~p~~~aaa~a~ 299 (408)
T PRK04612 229 IQC--GMGRTGTLFAHWQEQVTP---DIV--TLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFG--GNPLAAAVARVA 299 (408)
T ss_pred ccc--CCCcCCchhhhhhcCCCC---CEE--EEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCC--CCHHHHHHHHHH
Confidence 999 89999976 344456666 555 999999852 288888899988887655655665 899999999999
Q ss_pred HHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Ceec--CCCCCCeEEEEeCC--cchHHHHHHHHHHCCceEEee
Q 040324 355 IQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEVL--GDNDSPVMPIMVYN--PAKVSSFSRECLKQNVAIVTV 428 (488)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~ 428 (488)
|++++ .+++.+++++++++|+++|+++. +++. ....+.++.+.+.. ......+.+.|+++|+++.+.
T Consensus 300 L~~~~-------~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~ 372 (408)
T PRK04612 300 LRKLA-------SPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA 372 (408)
T ss_pred HHHHH-------hccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC
Confidence 99983 35788999999999999998762 2222 12335677777753 234568899999999999742
Q ss_pred cCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 429 GFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 429 ~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.+.+||.||+.+|++|||+++++|++++.++
T Consensus 373 -------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~ 404 (408)
T PRK04612 373 -------GPDVLRFVPALNLTDAELADGLARLRLALADY 404 (408)
T ss_pred -------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHH
Confidence 24789999999999999999999999999775
No 79
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-39 Score=331.06 Aligned_cols=351 Identities=16% Similarity=0.178 Sum_probs=266.3
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
+|..+.+++|+|+||.| |++||||.+ .....+||+||++.+|+++|++++..... ....+
T Consensus 22 ~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~ 82 (421)
T PRK06777 22 CDFYAERAENATLWDVE---------------GREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY----QIVPY 82 (421)
T ss_pred CCeeEEeeecCEEEeCC---------------CCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc----cccCC
Confidence 36778999999999999 999999954 45678999999999999999998643221 11245
Q ss_pred hhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCCe-----------
Q 040324 146 ALHNELEECVARFVGK---PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (488)
+...+|.++|++..+. +++++++||++|++.+++ ..+++..+|.+...+|+.+..++.+++..
T Consensus 83 ~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~ 162 (421)
T PRK06777 83 ASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFP 162 (421)
T ss_pred hHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCC
Confidence 5667899999998753 579999999999966554 45677778888999999998777655421
Q ss_pred --EEEeeCC----------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC-C---hHHHHHHHHHcCcE
Q 040324 209 --IRVFQHN----------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC-K---LPEIITICKRYKAY 272 (488)
Q Consensus 209 --v~~~~~~----------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~-~---l~~l~~l~~~~g~~ 272 (488)
+..++.+ +++++++.+++.. .+...++||+||+++++|... + +++|+++|++||++
T Consensus 163 ~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~--------~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~l 234 (421)
T PRK06777 163 GSIFHALYPNELHGVSVEEALSSVERLFKADI--------APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGIL 234 (421)
T ss_pred CCcEEcCCCccccCcCHHHHHHHHHHHHHhcc--------CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1111222 2455666664310 124689999999999999644 3 99999999999999
Q ss_pred EEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHH
Q 040324 273 TYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAE 349 (488)
Q Consensus 273 li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~a 349 (488)
||+||+|+ ++|++|.+ ..+++++.| |++ |+||++|++ .|++++++++++.+....+..+++ ++|+.++
T Consensus 235 lI~DEv~t--g~gr~g~~~~~~~~~~~p---Div--~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~--~~p~~~a 305 (421)
T PRK06777 235 LIADEVQT--GFARTGKLFAMEYYDVKP---DLI--TMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYA--GNPLAVA 305 (421)
T ss_pred EEEechhh--CCccCCchhhhhhcCCCC---CEE--eeehhhcCCCceEEEEEcHHHHhccCCCCCCCCCC--cCHHHHH
Confidence 99999999 89999987 667788877 666 899999842 299999999999887655555555 9999999
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCc-------chHHHHHHHH
Q 040324 350 QIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNP-------AKVSSFSREC 418 (488)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l 418 (488)
+++++|+.+. .+++.+++++++++|+++|+++ +........+.++.+.+..+ .....+.+.|
T Consensus 306 aa~a~L~~~~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~ 378 (421)
T PRK06777 306 AALAVLDVIA-------EEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQA 378 (421)
T ss_pred HHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHH
Confidence 9999999883 3578899999999999999875 22111123345555545332 1244677778
Q ss_pred HHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 419 LKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 419 ~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+++||++.+.+ .. .+++||+||+.+|++++++++++|++++.
T Consensus 379 ~~~Gv~i~~~~----~~-g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 379 LEEGLLLLSCG----VH-GNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HhCCeEEeecC----CC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 89999998532 11 26899999999999999999999998863
No 80
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=5.6e-40 Score=329.24 Aligned_cols=341 Identities=14% Similarity=0.164 Sum_probs=267.3
Q ss_pred ccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHH
Q 040324 71 LSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHN 149 (488)
Q Consensus 71 i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (488)
+.+++|+++||.| |++||||.+ .....+||+||++.+|+++|+++...... . ..++...
T Consensus 1 ~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~----~-~~~~~~~ 60 (382)
T PLN00144 1 FVSGKGCKLYDVE---------------GKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSN----V-YHTIPQV 60 (382)
T ss_pred CeeeeccEEEeCC---------------CCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccc----c-ccCHHHH
Confidence 4579999999999 999999954 45678999999999999999998643221 1 2356668
Q ss_pred HHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---cC-------------CCcEEEEeCCCchHHHHHHHhcCC------
Q 040324 150 ELEECVARFVGKPAAIVFGMGYVTNSSILPVL---MG-------------KGSLIISDSLNHNSIVNGARGSGA------ 207 (488)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---~~-------------~~~~Vl~~~~~h~~~~~~~~~~g~------ 207 (488)
+|.++|++..+.+++++.+||++|++.+++.. ++ +..+|.+...+|+.+..+...++.
T Consensus 61 ~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 140 (382)
T PLN00144 61 ELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTP 140 (382)
T ss_pred HHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCcccccc
Confidence 99999999877778999999999997766543 32 245677788899998777665432
Q ss_pred ------eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 040324 208 ------TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 208 ------~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE 277 (488)
.+..++++|+++|++.+.. ...++|++||+++++|.+.+ +++|+++|++||+++|+||
T Consensus 141 ~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DE 208 (382)
T PLN00144 141 FEPLMPGVTFVEYGNLEAARKLIQK------------GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDE 208 (382)
T ss_pred CCCCCCCeEEeCCCCHHHHHHhcCC------------CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 2356678899999987742 25789999999888666542 9999999999999999999
Q ss_pred cccccccCCCCCC-cchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHH
Q 040324 278 AHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISA 354 (488)
Q Consensus 278 ~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~ 354 (488)
+|+ +||++|.+ ..++++++| |++ ||||++++ +.|++++++++++.+....+..+++ ++|+.++++.++
T Consensus 209 v~t--g~gr~g~~~~~~~~~~~P---Di~--t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~~--~~pl~~aaa~a~ 279 (382)
T PLN00144 209 VQC--GLGRTGYLWAHEAYGVEP---DIM--TLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTFA--GGPLVCNAALAV 279 (382)
T ss_pred hhh--CCCccchHhhhhhcCCCC---CEE--EecccccCCcceEEEEEcHHHHhccCCCCCCCCCC--CCHHHHHHHHHH
Confidence 999 99999976 556889988 555 99999975 3399999999999887655655555 999999999999
Q ss_pred HHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee--cCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecC
Q 040324 355 IQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEV--LGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGF 430 (488)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~ 430 (488)
|++++ ..++.++++++++++++.|+++ ..+. .....+.++++.+. .....+.+.|+++||.+.+.+
T Consensus 280 l~~i~-------~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~--~~~~~~~~~~~~~Gv~i~~~~- 349 (382)
T PLN00144 280 LDKIS-------KPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLD--VPAGPLVDACRDSGLLVLTAG- 349 (382)
T ss_pred HHHHh-------hchHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEec--CccHHHHHHHHHCCeEEeecC-
Confidence 99983 3567778888888888777653 2211 11125678888773 235679999999999998531
Q ss_pred CCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 431 PATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 431 ~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
. .+.+||+|++.+|++|+++++++|++++.++
T Consensus 350 ---~--~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 350 ---K--GDVVRLVPPLVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred ---C--CCEEEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence 1 3789999999999999999999999998764
No 81
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=5.6e-40 Score=333.10 Aligned_cols=345 Identities=15% Similarity=0.153 Sum_probs=272.7
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|.++.+++|+++||.| |++||||.|+ ....+||+||.+.+++.+++++++.... .+ ..
T Consensus 25 ~~~~~~~~~G~~~~d~d---------------g~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~----~~-~~ 84 (398)
T PRK03244 25 PPLALVRGEGAVVWDVD---------------GKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSN----LF-AT 84 (398)
T ss_pred CCceEEEeeecEEEECC---------------CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccC----cc-CC
Confidence 45778899999999999 9999999763 2234556689999999999998754321 12 23
Q ss_pred hhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhhcc--cCCCcEEEEeCCCchHHHHHHHhcC------------Ce
Q 040324 146 ALHNELEECVARFVGK---PAAIVFGMGYVTNSSILPVL--MGKGSLIISDSLNHNSIVNGARGSG------------AT 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~~~--~~~~~~Vl~~~~~h~~~~~~~~~~g------------~~ 208 (488)
+...++++.++++++. ++++++++|++|+..+++.+ .++.++|.++..+|+.+..+....+ ..
T Consensus 85 ~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 164 (398)
T PRK03244 85 EPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGG 164 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCC
Confidence 4557999999999875 36888899999998777644 3455777777888888776665543 23
Q ss_pred EEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcccccccc
Q 040324 209 IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGAV 284 (488)
Q Consensus 209 v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~g~~ 284 (488)
+..++++|++++++.+.+ ..++|++|++++++|.+.| +++|+++|++||++||+||+|+ +|
T Consensus 165 ~~~~~~~d~~~l~~~~~~-------------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~--g~ 229 (398)
T PRK03244 165 VEHVPYGDVDALAAAVDD-------------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT--GI 229 (398)
T ss_pred ceEeCCCCHHHHHHhhcC-------------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--CC
Confidence 566778899999887742 4678888999999999887 9999999999999999999999 89
Q ss_pred CCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhcc
Q 040324 285 GKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGE 361 (488)
Q Consensus 285 g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~ 361 (488)
|++|.+ ..+++++.| |++ ||||++|++ .|++++++++++.+....+..+++ .+|+.++++.++|+++.
T Consensus 230 gr~g~~~~~~~~~~~p---Di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~-- 300 (398)
T PRK03244 230 GRTGAWFAHQHDGVTP---DVV--TLAKGLGGGLPIGACLAFGPAADLLTPGLHGSTFG--GNPVACAAALAVLDTIA-- 300 (398)
T ss_pred cccchHHhhhhhCCCC---CEE--EEchhhhCCcccEEEEEcHHHHhhccCCCCcCCCC--CCHHHHHHHHHHHHHHH--
Confidence 999986 566778877 665 999999842 289999999999887655555665 99999999999999873
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC--CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCe
Q 040324 362 DGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG--DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLAR 439 (488)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~ 439 (488)
.+++.+++++++++|++.|++++.+... ...+.++++.+.. .....+.++|+++||++.+.+ .+.
T Consensus 301 -----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~-~~~~~~~~~l~~~Gv~~~~~~-------~~~ 367 (398)
T PRK03244 301 -----SEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTA-PVAKAVEAAAREAGFLVNAVA-------PDV 367 (398)
T ss_pred -----hccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEec-cHHHHHHHHHHHCCeEEeecC-------CCE
Confidence 3467888999999999999987653222 2346777887743 356689999999999998522 378
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 440 ARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 440 iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+||+|++.+|++|+++++++|++++.++.
T Consensus 368 iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 368 IRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999997653
No 82
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=4e-40 Score=335.15 Aligned_cols=354 Identities=14% Similarity=0.151 Sum_probs=262.8
Q ss_pred hhhcccCCC--ccCCCCceEEEe-eccccCCcccccccCCcceeEEec-cccccCCCCCCccchH--HHHHHHHHcCCCC
Q 040324 62 RVQDCFGRP--LSSAPDAWFDVV-ERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTP--RVIDSLKKYSHST 135 (488)
Q Consensus 62 ~~~~~~~~~--i~~~~G~~~~~~-dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~--a~~~~l~~~~~~~ 135 (488)
...+.+|.+ +.+++|+|+||. | |++||||. +.....+||+||++.+ |+++|+++.....
T Consensus 19 ~~~~~~p~~~~i~~a~G~~l~D~~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~ 83 (443)
T PRK08297 19 ILVDGFDLVLDLERSQGSYLVDART---------------GRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNK 83 (443)
T ss_pred HhhcCCCcceEEEeccCCEEEECCC---------------CCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhc
Confidence 345566766 689999999996 9 99999994 4566789999999999 9999998854211
Q ss_pred CCcccCCCChhhHHHHHHHHHHHh-C--CCCeEEeCCcHHHHhhhhhcc----------cC-----CCcEEEEeCCCchH
Q 040324 136 CSSRVDGGTLALHNELEECVARFV-G--KPAAIVFGMGYVTNSSILPVL----------MG-----KGSLIISDSLNHNS 197 (488)
Q Consensus 136 ~~~~~~~g~~~~~~~l~~~la~~~-g--~~~~i~~~sGs~a~~~~~~~~----------~~-----~~~~Vl~~~~~h~~ 197 (488)
.++ ....++...++.++|++.. + .+++++++||++|++.+++.. .+ +..+|.+...+|+.
T Consensus 84 ~~~--~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~ 161 (443)
T PRK08297 84 PSN--SDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGR 161 (443)
T ss_pred ccc--CCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCc
Confidence 111 1123566678999999886 2 357999999999998776654 12 34567778899999
Q ss_pred HHHHHHhcCCeEE------------------EeeC-------------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEE
Q 040324 198 IVNGARGSGATIR------------------VFQH-------------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVV 246 (488)
Q Consensus 198 ~~~~~~~~g~~v~------------------~~~~-------------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~ 246 (488)
+..++..++.... .++. ++++++++.+.+. +.+.++||+
T Consensus 162 t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----------~~~iAavI~ 231 (443)
T PRK08297 162 SGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERH----------PHDIACFIA 231 (443)
T ss_pred chhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhC----------CCcEEEEEE
Confidence 8887776642110 0010 0123334444321 347899999
Q ss_pred cCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcccEEE
Q 040324 247 EGIYSMEGELC----KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYGGYIA 321 (488)
Q Consensus 247 e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~ 321 (488)
|||++++|.+. +|++|+++|++||++||+||||+ +|||+|.+ +++++++.| ||+ +|+|+++ .||++.
T Consensus 232 EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t--GfGRtG~~~a~~~~gv~P---Div--~~gK~l~-~~a~l~ 303 (443)
T PRK08297 232 EPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT--GVGLTGTAWAYQQLGVRP---DIV--AFGKKTQ-VCGIMA 303 (443)
T ss_pred ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh--ccCccchHHHHHhcCCCC---CEE--Eeccccc-ccceec
Confidence 99999999875 49999999999999999999999 99999987 788899988 777 8999985 356665
Q ss_pred eCHHHHHHHH-----hhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee--
Q 040324 322 GSKELIQYLK-----YNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEV-- 392 (488)
Q Consensus 322 ~~~~~~~~~~-----~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~-- 392 (488)
++ ++.+... ...+..|++ +||+.|++++++|+++. .+++.+++++++++|+++|+++ .++.
T Consensus 304 ~~-~i~~~~~~~~~~~~~~~~T~~--gnpl~~aaa~a~L~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~ 373 (443)
T PRK08297 304 GR-RVDEVEDNVFAVSSRINSTWG--GNLVDMVRARRILEVIE-------EDGLVENAARQGEYLLARLEELAAEFPAVV 373 (443)
T ss_pred ch-HHHHhhhhhccCccccCCCCC--ccHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 54 4333221 112444554 99999999999999983 3568889999999999999875 1221
Q ss_pred -cCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 393 -LGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 393 -~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.....+.++.+.+.+......+++.|+++||++.+. +.+.+||+||+.+|++|+|+++++|+++++++
T Consensus 374 ~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~-------~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 374 SNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPC-------GERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred eeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecC-------CCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 112236778888866555668999999999999742 23679999999999999999999999998765
No 83
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=1.7e-39 Score=329.56 Aligned_cols=350 Identities=13% Similarity=0.144 Sum_probs=268.5
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
|..+.+++|+++||.| |++||||. ++..+.+||+||.+.+|+.+|++++..... ....++
T Consensus 23 ~~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~~~~~~ 83 (421)
T PRK09792 23 NFFAQSAENATLKDVE---------------GNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY----QIVPYE 83 (421)
T ss_pred CeeEEeccccEEEeCC---------------CCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc----CccCCH
Confidence 5678999999999999 99999994 456678999999999999999998643221 112456
Q ss_pred hHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCCe------------
Q 040324 147 LHNELEECVARFVGK---PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGAT------------ 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~------------ 208 (488)
...+|.++|++..+. +++++++||++|++.+++ ..+++..+|.+...+|+.+...+..++..
T Consensus 84 ~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~ 163 (421)
T PRK09792 84 SYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPG 163 (421)
T ss_pred HHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCC
Confidence 668899999998752 578999999999966554 44677777888889999987776654421
Q ss_pred -EEEeeC----------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC-C---hHHHHHHHHHcCcEE
Q 040324 209 -IRVFQH----------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC-K---LPEIITICKRYKAYT 273 (488)
Q Consensus 209 -v~~~~~----------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~-~---l~~l~~l~~~~g~~l 273 (488)
+..++. ++++.+++.+++.. .+...++|++||+++++|... + +++|+++|++||++|
T Consensus 164 ~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~--------~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~ll 235 (421)
T PRK09792 164 SVYHVPYPSDLHGISTQDSLDAIERLFKSDI--------EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVM 235 (421)
T ss_pred CcEEcCCCcccccccHHHHHHHHHHHHHhcc--------CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 222222 13466666665311 023688999999999999755 4 999999999999999
Q ss_pred EEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHH
Q 040324 274 YLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQ 350 (488)
Q Consensus 274 i~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa 350 (488)
|+||+++ +||++|++ ..+++++.| |++ ||+|+++++ .|++++++++++.+....+..+++ +||+.|++
T Consensus 236 I~DEv~t--g~gr~G~~~a~~~~~~~p---Di~--t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~--gnpl~~aa 306 (421)
T PRK09792 236 IADEVQS--GFARTGKLFAMDHYADKP---DLM--TMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYA--GNPLAVAA 306 (421)
T ss_pred EEecccc--CCCCCCchhHHHhcCCCC---cEE--EeehhhcCCCceEEEEEcHHHHhccCCCCcCCCCC--CCHHHHHH
Confidence 9999999 89999987 567788777 655 999999752 299999999999887655655665 99999999
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCee-cCCCC-CCeEEEEeCCc-------chHHHHHHHHH
Q 040324 351 IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEV-LGDND-SPVMPIMVYNP-------AKVSSFSRECL 419 (488)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~-~~~~~-~~~~~~~~~~~-------~~~~~~~~~l~ 419 (488)
+++++++++ .+++.+++++.++++++.|+++ .++. ....+ +.++++.+.+. .....+.+.|+
T Consensus 307 a~a~l~~l~-------~~~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~ 379 (421)
T PRK09792 307 AHAVLNIID-------KESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL 379 (421)
T ss_pred HHHHHHHHH-------hhhHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHH
Confidence 999999984 3467788888888888888765 1221 22223 67888888643 23567899999
Q ss_pred HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 420 KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 420 ~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
++||++.+ ..+ ..+.+||.||+.+|++|+++++++|++++.
T Consensus 380 ~~Gv~i~~----~g~-~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 380 AQGLLLLT----CGA-YGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred HCCcEEee----cCC-CCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 99999863 111 247899999999999999999999999874
No 84
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=1.6e-40 Score=336.32 Aligned_cols=345 Identities=15% Similarity=0.144 Sum_probs=254.4
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHH--HHHcCCCCCCcccCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDS--LKKYSHSTCSSRVDG 142 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~--l~~~~~~~~~~~~~~ 142 (488)
.+|..+.+++|+|+||.| |++||||.| ...+.+||+||.+.+|+++| ...+.... .
T Consensus 39 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~---~--- 97 (464)
T TIGR00699 39 HFLADYEKSRGNYLVDVD---------------GNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP---A--- 97 (464)
T ss_pred ccceEEEecccCEEEeCC---------------CCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc---c---
Confidence 566778999999999999 999999954 57788999999999999995 33322111 1
Q ss_pred CChhhHHHHHHHHH----HHhC--CCCeEEeCCcHHHHhhhhhccc----------------------------C--CCc
Q 040324 143 GTLALHNELEECVA----RFVG--KPAAIVFGMGYVTNSSILPVLM----------------------------G--KGS 186 (488)
Q Consensus 143 g~~~~~~~l~~~la----~~~g--~~~~i~~~sGs~a~~~~~~~~~----------------------------~--~~~ 186 (488)
..++...++.++|+ +.++ .+++++.+||++||+.+++... + +..
T Consensus 98 ~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ 177 (464)
T TIGR00699 98 LGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLS 177 (464)
T ss_pred CCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCE
Confidence 12344466777764 4554 3578999999999987766541 1 125
Q ss_pred EEEEeCCCchHHHHHHHhcCCeE-----------EEeeC-------------------CCHHHHHHHHHHHHhcCCCCCC
Q 040324 187 LIISDSLNHNSIVNGARGSGATI-----------RVFQH-------------------NTPSHLEEVLREQIAEGQPRTR 236 (488)
Q Consensus 187 ~Vl~~~~~h~~~~~~~~~~g~~v-----------~~~~~-------------------~d~~~Le~~l~~~~~~~~p~~~ 236 (488)
+|.+...+|+.+..++..++... ..++. ++++++++++++.
T Consensus 178 ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~--------- 248 (464)
T TIGR00699 178 ILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW--------- 248 (464)
T ss_pred EEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---------
Confidence 77788899999988777654211 01111 1244556666431
Q ss_pred CCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEccccc
Q 040324 237 RPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSK 311 (488)
Q Consensus 237 ~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK 311 (488)
+...++||+||+++++|.+.+ |++|+++|++||++||+||||+ +||++|.+ +++++|+. ..+||+ |++|
T Consensus 249 -~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t--GfGrtG~~fa~e~~gv~-~~PDi~--t~gK 322 (464)
T TIGR00699 249 -HKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT--GVGATGKFWAHEHWNLD-DPPDMV--TFSK 322 (464)
T ss_pred -CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee--CCCCCcchhHHHhcCCC-CCCCEE--Eehh
Confidence 136899999999999999887 9999999999999999999999 99999988 88999997 122776 9999
Q ss_pred ccCCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--
Q 040324 312 SFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-- 389 (488)
Q Consensus 312 ~~g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-- 389 (488)
++|++ |++++++ .+.......++.|++ +||++|++++++|+++ +.+++.+++++++++|+++|+++.
T Consensus 323 ~lg~g-G~~~~~~-~~~~~~~~~~~~T~~--gnp~~~aaa~a~L~~l-------~~~~l~~~~~~~g~~l~~~L~~l~~~ 391 (464)
T TIGR00699 323 KFQTA-GYFFHDP-AFRPNKPYRQFNTWM--GDPSRALILREIIQEI-------KRKDLLENVAHVGDYLYTGLEDLQKK 391 (464)
T ss_pred hhccC-Cccccch-hccCCCCcccccCCC--CCHHHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99643 4444443 211111122444555 9999999999999998 345788899999999999998762
Q ss_pred Ce-ecCC----CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 390 FE-VLGD----NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 390 ~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
++ ++.. ..+.++++.+.+......+.+.|+++|+++.+. +.+.+||+||+.+|++|||+++++|++++
T Consensus 392 ~~~~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~-------g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 392 YPEFIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGC-------GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CCCceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecC-------CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 33 2222 346888888765555678999999999999742 24789999999999999999999998763
No 85
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=327.65 Aligned_cols=341 Identities=20% Similarity=0.251 Sum_probs=267.7
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecccc-ccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYN-YLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.++.++.+++|++++|.| |++||||+|+. ...+||+||++.+|+.+++++....+ . ...
T Consensus 10 ~~~~~~~~~~G~~~~d~~---------------G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~---~--~~~ 69 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNN---------------GKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVS---N--LFT 69 (377)
T ss_pred CCCceEEEeecCEEEeCC---------------CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccc---c--ccC
Confidence 467788999999999999 99999997764 34566789999999999999853321 1 124
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhc---ccCCCcEEEEeCCCchHHHHHHHhcCC------------eE
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPV---LMGKGSLIISDSLNHNSIVNGARGSGA------------TI 209 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~---~~~~~~~Vl~~~~~h~~~~~~~~~~g~------------~v 209 (488)
.+...++++.+++..+.+.+++++||++||..+++. ..+++++|.++..+|+++..+...++. .+
T Consensus 70 ~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (377)
T PRK02936 70 NSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGF 149 (377)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCc
Confidence 566677777777776667899999999999777764 356677888888999998887776543 23
Q ss_pred EEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccccC
Q 040324 210 RVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
..++++|++++++.+.+ +.++|++|++++++|..++ +++|+++|++||+++|+||+|+ ++|
T Consensus 150 ~~~~~~d~~~l~~~~~~-------------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~--g~g 214 (377)
T PRK02936 150 THVPFNDIKALKEVMNE-------------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT--GIG 214 (377)
T ss_pred eEeCCCCHHHHHHhccC-------------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc--CCC
Confidence 46788899999987753 4678999999998887653 9999999999999999999998 799
Q ss_pred CCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccC
Q 040324 286 KTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGED 362 (488)
Q Consensus 286 ~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (488)
++|++ ..++++++| |++ ||||+++++ +|++++++++++.+....+.++++ ++|+.++++.++|+.+.
T Consensus 215 ~~g~~~~~~~~~~~~---di~--t~sK~l~~G~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~aaa~a~l~~~~--- 284 (377)
T PRK02936 215 RTGTLFAYEQFGLDP---DIV--TVAKGLGNGIPVGAMIGKKELGTAFGPGSHGSTFG--GNPLAMAAAKEVLQVIK--- 284 (377)
T ss_pred cCchhhHHHhhCCCC---cEE--EEcccccCCCccEEEEEcHHHHhhccCCCCCCCCC--CCHHHHHHHHHHHHHHH---
Confidence 99977 456678776 555 899999852 499999999999887655544554 89999999999999872
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhC--CCeecC--CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCC
Q 040324 363 GSCRGAQKLARIRENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLA 438 (488)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~ 438 (488)
.++.+++++++.+++++.|++. +++... ...+.++++.+... ...+.+.|.++||++.+. +.+
T Consensus 285 ----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~--~~~~~~~l~~~gv~v~~~-------g~~ 351 (377)
T PRK02936 285 ----QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE--VAPVIEQLREEGLLVLSA-------GPN 351 (377)
T ss_pred ----hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch--HHHHHHHHHHCCeEEecC-------CCC
Confidence 3456788888999999988873 232211 12456777777543 667889999999999852 247
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 439 RARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 439 ~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
++||+|++.+|++++++++++|++++
T Consensus 352 ~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 352 VIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EEEEECCcccCHHHHHHHHHHHHHhC
Confidence 89999999999999999999998763
No 86
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=358.03 Aligned_cols=351 Identities=14% Similarity=0.129 Sum_probs=272.3
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
.|..+.+++|+|++|.| |++||||.++ +.++||+||++.+|+++|+.+....+ + ...+
T Consensus 567 ~p~~i~~g~G~~l~D~d---------------G~~ylD~~~~-~~~lGh~hp~v~~Ai~~q~~~l~~~~---~---~~~~ 624 (972)
T PRK06149 567 DPPQIERGWRHHLFDMA---------------GRSYLDMVNN-VTVLGHGHPRLAAAAARQWSLLNTNS---R---FHYA 624 (972)
T ss_pred CCCeEEEeeeeEEEeCC---------------CCEEEECCCC-ccccCCCCHHHHHHHHHHHHhccccc---c---ccCH
Confidence 35678999999999999 9999999854 56899999999999999998864322 2 1346
Q ss_pred hHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC-------------e
Q 040324 147 LHNELEECVARFVG--KPAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA-------------T 208 (488)
Q Consensus 147 ~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~-------------~ 208 (488)
...+|+++|++.++ .+++++++||++||+.+++ +++++.++|.++..+|+.+..+...++. .
T Consensus 625 ~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~ 704 (972)
T PRK06149 625 AVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDW 704 (972)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCC
Confidence 77899999999984 4789999999999977665 6778889999999999988766444321 0
Q ss_pred EEEe----------eCCC-----HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHc
Q 040324 209 IRVF----------QHNT-----PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRY 269 (488)
Q Consensus 209 v~~~----------~~~d-----~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~ 269 (488)
+..+ ++++ .+++++.++..... +...++||+|||++++|.+.+ |++++++|++|
T Consensus 705 v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~ 777 (972)
T PRK06149 705 VHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDAS-------GRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR 777 (972)
T ss_pred eEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhc-------CCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc
Confidence 1111 1122 35566666543211 237899999999999999887 99999999999
Q ss_pred CcEEEEEccccccccCCCCC-C-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCH
Q 040324 270 KAYTYLDEAHSIGAVGKTGR-G-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISP 345 (488)
Q Consensus 270 g~~li~DE~~s~g~~g~~g~-~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p 345 (488)
|+++|+||||+ +|||+|. + .++++|+.| ||+ |++|++|++ .|++++++++++.+..... +..++++||
T Consensus 778 g~llI~DEV~t--GfGRtG~~~~a~e~~gv~P---Div--t~gK~lg~G~Pl~av~~~~~i~~~~~~~~~-~~sT~~gnP 849 (972)
T PRK06149 778 GGVCIADEVQV--GYGRLGHYFWGFEQQGVVP---DII--TMAKGMGNGHPLGAVITRREIAEALEAEGY-FFSSTGGSP 849 (972)
T ss_pred CCEEEEEeehh--cCCccCccchhhhhcCCCC---CEE--EecccccCCeeeEEEEEcHHHHhhhccCCc-ccCCCCCCH
Confidence 99999999999 9999997 3 678899988 777 999999863 3999999999998864221 112345999
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCC--CCCCeEEEEeCC--------cchHHH
Q 040324 346 PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGD--NDSPVMPIMVYN--------PAKVSS 413 (488)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~--~~~~~~~~~~~~--------~~~~~~ 413 (488)
++|++++++|+++ +.+++.+++++++++|+++|+++ ..++++. ..+.++.+.+.. ......
T Consensus 850 ~~~aaala~L~~i-------~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~ 922 (972)
T PRK06149 850 VSCRIGMAVLDVL-------REEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAA 922 (972)
T ss_pred HHHHHHHHHHHHH-------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHH
Confidence 9999999999999 34578899999999999999876 1222222 234666776631 123567
Q ss_pred HHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 414 FSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+++.|+++||++.+.+ + ..+++||.||+++|++|+|++++++++++.+
T Consensus 923 i~~~l~~~Gvl~~~~g----~-~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 923 ICDRLLELGVIMQPTG----D-HLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHhCCeEEeecC----C-CCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999998532 1 1378999999999999999999999999865
No 87
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.7e-39 Score=321.19 Aligned_cols=331 Identities=15% Similarity=0.138 Sum_probs=256.1
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|..+.+++|+|+||.| |++||||.+ .....+||+||++.+|+++|+++...... . -.+
T Consensus 6 ~~~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~----~-~~~ 65 (364)
T PRK04013 6 KRLRLVRGEGIYVWDSQ---------------GRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP----M-FEH 65 (364)
T ss_pred CCccEEEeecCEEEECC---------------CCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC----C-cCC
Confidence 46678999999999999 999999954 46678999999999999999998643221 1 135
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---cCCCcEEEEeCCCchHHHHHHHhcC------------CeEE
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL---MGKGSLIISDSLNHNSIVNGARGSG------------ATIR 210 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---~~~~~~Vl~~~~~h~~~~~~~~~~g------------~~v~ 210 (488)
+...+++++++++.+.+.+++++||++|++.+++.. .++..+|.++..+|+.+...+..++ ..+.
T Consensus 66 ~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~ 145 (364)
T PRK04013 66 EEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFK 145 (364)
T ss_pred HHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcE
Confidence 667899999999998889999999999997666544 4566677778889988776655332 1245
Q ss_pred EeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccccCC
Q 040324 211 VFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGAVGK 286 (488)
Q Consensus 211 ~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~g~~g~ 286 (488)
.++.+|.+++++.+.+ +.++||+|++++.+|.+++ +++++++|++||+++|+||+++ ++ |
T Consensus 146 ~~~~~d~~~l~~~i~~-------------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~t--G~-R 209 (364)
T PRK04013 146 HIPFNDVEAAKEAITK-------------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQS--GL-R 209 (364)
T ss_pred EecCCCHHHHHHHhcC-------------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh--cC-C
Confidence 5677888888887753 5789999999999887663 9999999999999999999999 88 9
Q ss_pred CCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCC
Q 040324 287 TGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDG 363 (488)
Q Consensus 287 ~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~ 363 (488)
+|.+ ..+++++.| ||+ +++|++|++ .|+++.++++. ...+++||+ +||++|++++++|++++
T Consensus 210 tG~~~a~~~~gv~P---Div--~~gK~lggG~P~~a~~~~~~~~----~~~~~~T~~--gnp~~~aaa~a~l~~i~---- 274 (364)
T PRK04013 210 TGKFLAIEHYKVEP---DIV--TMGKGIGNGVPVSLTLTNFDVE----RGKHGSTFG--GNPLACKAVAVTLRILR---- 274 (364)
T ss_pred CCchhHHHhcCCCC---CEE--EecccccCCceeEEEEeccccc----CCCcCCCCC--cCHHHHHHHHHHHHHHH----
Confidence 9987 778899998 777 899999763 27777776652 234555555 99999999999999994
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhCCCeecCC--CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEE
Q 040324 364 SCRGAQKLARIRENSNFFRSKLQKMGFEVLGD--NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARAR 441 (488)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iR 441 (488)
.+++.++.++. +. .+.. +.+.+ ..+.++.+.+..+ ...+.+.|+++|+++.+. +.+.+|
T Consensus 275 ---~~~l~~~~~~~---l~-~l~~---~~v~~vRG~Gl~~gve~~~~--~~~i~~~~~~~Gll~~~~-------g~~vlr 335 (364)
T PRK04013 275 ---RERLVEKAGEK---FI-EIKG---ERVVTTRGRGLMIGIVLKKP--VGKYVEELQNRGYLVHTA-------GQRVIR 335 (364)
T ss_pred ---hccHHHHHHHH---HH-Hhcc---CcceeeeeCcEEEEEEeCCc--HHHHHHHHHhCCcEEeeC-------CCCEEE
Confidence 34566666554 22 2221 11122 2346677777543 567899999999999742 237899
Q ss_pred EeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 442 ICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 442 i~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
|.||+.+|++|+++++++|+++++++
T Consensus 336 ~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 336 LLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred EeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999764
No 88
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=4.6e-39 Score=327.12 Aligned_cols=351 Identities=14% Similarity=0.172 Sum_probs=264.7
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||. +...+.+||+||++.+|+++|+++...... ....
T Consensus 14 ~~p~~~~~a~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~----~~~~ 74 (420)
T TIGR00700 14 TLPVFAARAEGAILEDVD---------------GNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF----MVTP 74 (420)
T ss_pred CCCeeEEeeeeeEEEeCC---------------CCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc----cccC
Confidence 567788999999999999 99999995 456688999999999999999998643221 1123
Q ss_pred hhhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCC-----------
Q 040324 145 LALHNELEECVARFVGK---PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGA----------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~----------- 207 (488)
.+...++.++|++..+. +++++++||++|++.+++ .++++..+|.+...+|+.+...+.+++.
T Consensus 75 ~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 154 (420)
T TIGR00700 75 YEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPF 154 (420)
T ss_pred ChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCC
Confidence 45567899999998752 578999999999966554 4567778888899999998877765432
Q ss_pred --eEEEeeCC----------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHH
Q 040324 208 --TIRVFQHN----------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITI 265 (488)
Q Consensus 208 --~v~~~~~~----------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l 265 (488)
.+..++.. +++.+++.+... . .+...++||+|||++.+|.+.+ +++|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~l 226 (420)
T TIGR00700 155 APEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID--V------GANNVAALVIEPVQGEGGFIVPAKGFVPALLDW 226 (420)
T ss_pred CCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh--c------CCCcEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 11112221 134455544311 0 1247899999999999998775 9999999
Q ss_pred HHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccC
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYAT 341 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~ 341 (488)
|++||++||+||+|+ +||++|.+ ..+++++.| |++ ||||++++ | |++++++++++.+....+..+++
T Consensus 227 c~~~gillI~DEV~t--g~gr~g~~~a~~~~~~~p---Di~--~lsK~l~~-G~pig~v~~~~~i~~~~~~~~~~~T~~- 297 (420)
T TIGR00700 227 CREHGIVFIADEVQT--GFARTGAMFACEHEGPEP---DLI--TTAKSLAD-GLPLSGVTGRAEIMDAPAPGGLGGTYA- 297 (420)
T ss_pred HHHcCCEEEEEeccc--CCcccchhHHHhhcCCCC---CEE--EeeccccC-CcceEEEEecHHHHhhcCCCCcCCCCC-
Confidence 999999999999999 99999976 667788877 666 89999984 4 99999999999887655655665
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCc-------ch
Q 040324 342 SISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNP-------AK 410 (488)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------~~ 410 (488)
++|+.+++++++|+++. .+++.+++++.++++++.|+++ +........+.++++.+.++ ..
T Consensus 298 -~~pl~~aaa~a~l~~l~-------~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~ 369 (420)
T TIGR00700 298 -GNPLACAAALAVLAIIE-------SEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGL 369 (420)
T ss_pred -cCHHHHHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCCCCccHHH
Confidence 99999999999999883 3456777777788888887764 22111122356777766322 23
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
...+.+.|+++||++.+.+ .. .+++||+||+.+|++++++++++|+++++
T Consensus 370 ~~~l~~~~~~~Gv~i~p~~----~f-~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 370 AERIATAAHAAGLLLLTCG----MF-GNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHCCeEEeccC----CC-CCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 4577888889999998532 11 27899999999999999999999999874
No 89
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=2.1e-39 Score=330.07 Aligned_cols=344 Identities=16% Similarity=0.133 Sum_probs=262.5
Q ss_pred cccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC
Q 040324 65 DCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 65 ~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (488)
.++|.++.+++|+++||+| |++||||. ++....+||+||.+.+|+++|+++. .... .
T Consensus 55 ~~~p~~~~~a~G~~v~D~D---------------G~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~-~~~~------~ 112 (453)
T PRK07046 55 TPFPLFVAEARGARFTDVD---------------GHRYDDFCLGDTGAMFGHSPAPVARALAEQARRG-LTTM------L 112 (453)
T ss_pred CCCCCeEEeeeeCEEEeCC---------------CCEEEEecccccccccCCCCHHHHHHHHHHHHhC-CCCC------C
Confidence 3577888999999999999 99999994 5567889999999999999999884 2221 2
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh---hcccCCCcEEEEeCCCchHHHHHHHh--c----------C--
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL---PVLMGKGSLIISDSLNHNSIVNGARG--S----------G-- 206 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~---~~~~~~~~~Vl~~~~~h~~~~~~~~~--~----------g-- 206 (488)
.++...+|.++|++.++.+++.|++||++|++.++ ++++++..+|.+...+|+.+...+.. . +
T Consensus 113 ~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~ 192 (453)
T PRK07046 113 PSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQV 192 (453)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCC
Confidence 45677899999999988889999999999996544 55678877888888899975333211 0 1
Q ss_pred ----CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEcc
Q 040324 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 207 ----~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~ 278 (488)
..+..+++||++++++.+.. ...++||+||++++.|.+.| |++++++|++||++||+|||
T Consensus 193 ~~~~~~~~~~~~nd~~~l~~~l~~------------~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV 260 (453)
T PRK07046 193 HDLTATTRVVEFNDLAALEAALAD------------GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDET 260 (453)
T ss_pred ccccCceEeeCCCCHHHHHHHhCC------------CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 12456778999999988842 26899999999999998875 99999999999999999999
Q ss_pred ccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhh------CC-CCcccCCCCHHHHH
Q 040324 279 HSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYN------CP-AHLYATSISPPAAE 349 (488)
Q Consensus 279 ~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~------~~-~~~~~~~~~p~~~a 349 (488)
++ +..|..| ..+++|+.| |++ |++|++|++ .|++++++++++.+... .. .+..+.++||+.|+
T Consensus 261 ~t-fr~g~Gg--~~~~~gv~P---Di~--t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~a 332 (453)
T PRK07046 261 HT-ISSGPGG--YTRAHGLEP---DFL--VVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMA 332 (453)
T ss_pred cc-CccCCcc--hhHHhCCCc---cce--eehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHH
Confidence 98 3333322 567789998 777 899999863 38899999999988632 11 11223349999999
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCC--------------cchH
Q 040324 350 QIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYN--------------PAKV 411 (488)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~--------------~~~~ 411 (488)
+++++|+++. .++..+++.+++++|+++|+++ ++.......+.++.+.+.. ....
T Consensus 333 a~~a~L~~l~-------~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~ 405 (453)
T PRK07046 333 AMRATLAEVM-------TEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELE 405 (453)
T ss_pred HHHHHHHHHh-------cccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHH
Confidence 9999999983 3457888889999999988763 4433222224455555422 1123
Q ss_pred HHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 412 SSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
..+...|+++||++.+. .+.++++| .||++|||+++++++++++++
T Consensus 406 ~~~~~~~~~~Gv~~~~~--------~~~~~~~p--~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 406 AALHLYLLNRGVLITPF--------HNMMLVCP--ATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHHHHHHCCCEEecc--------cCcEEEeC--CCCHHHHHHHHHHHHHHHHHH
Confidence 46788899999998741 14578887 499999999999999999765
No 90
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=327.94 Aligned_cols=349 Identities=15% Similarity=0.193 Sum_probs=275.8
Q ss_pred cccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC
Q 040324 65 DCFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 65 ~~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g 143 (488)
..+|.++.+++|+|++|.| |++||||+| +..+.+||+||.+.+|+.+++++++.... ..
T Consensus 11 ~~~~~~~~~~~G~~~~d~d---------------g~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~---~~-- 70 (400)
T PTZ00125 11 HPLPVVLKRGKGVFVWDVE---------------GKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR---AF-- 70 (400)
T ss_pred CCCCccEEeeecCEEEeCC---------------CCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccc---cc--
Confidence 3567788999999999999 999999965 34567899999999999999988754331 11
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc-----------CCCcEEEEeCCCchHHHHHHHhcCC-----
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM-----------GKGSLIISDSLNHNSIVNGARGSGA----- 207 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~-----------~~~~~Vl~~~~~h~~~~~~~~~~g~----- 207 (488)
..+...++++.++++.+.+++++++||++||+.+++.+. ++.++|.++..+|+.+...+..++.
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~ 150 (400)
T PTZ00125 71 YNDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYN 150 (400)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhc
Confidence 246778999999999988899999999999988777552 3456778888999998887765542
Q ss_pred -------eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEE
Q 040324 208 -------TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLD 276 (488)
Q Consensus 208 -------~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~D 276 (488)
.+..++++|+++|++.++. .+.++|++|++++++|.+.+ +++|+++|++||++||+|
T Consensus 151 ~~~~~~~~~~~~~~~d~~~le~~l~~------------~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~D 218 (400)
T PTZ00125 151 NFGPFVPGFELVDYNDVEALEKLLQD------------PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVD 218 (400)
T ss_pred cCCCCCCCceEeCCCCHHHHHHHhCC------------CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 2346678899999988852 14678889999999999887 999999999999999999
Q ss_pred ccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHH
Q 040324 277 EAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQII 352 (488)
Q Consensus 277 E~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~ 352 (488)
|+|+ ++|++|.+ ..+++++.| |++ ++||++++++ |++++++++++.+.......+++ .+|+.++++.
T Consensus 219 ev~~--g~g~~G~~~~~~~~~~~p---d~~--~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~~aa~ 289 (400)
T PTZ00125 219 EIQT--GLGRTGKLLAHDHEGVKP---DIV--LLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYG--GNPLACAVAV 289 (400)
T ss_pred cccc--CCCccchhhHHHhcCCCC---CEE--EEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCC--cCHHHHHHHH
Confidence 9998 89999876 455677766 666 7899997643 89999999999887555544554 8999999999
Q ss_pred HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCC--cchHHHHHHHHHHCCceEE
Q 040324 353 SAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYN--PAKVSSFSRECLKQNVAIV 426 (488)
Q Consensus 353 a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~ 426 (488)
++|+.+.+ +++.++++++.++++++|+++ +........+.++++.+.. .....++++.|+++||.+.
T Consensus 290 ~~l~~i~~-------~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~ 362 (400)
T PTZ00125 290 EALEVLKE-------EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAK 362 (400)
T ss_pred HHHHHHHh-------cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcchHHHHHHHHHHHCCeEEe
Confidence 99998842 345677778888888888775 2221112245666776653 2356689999999999998
Q ss_pred eecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 427 TVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 427 ~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+. +.+++||+|++.+|++++++++++|+++++++.
T Consensus 363 ~~-------~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 363 PT-------HDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred ec-------CCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 52 247899999999999999999999999988763
No 91
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=356.72 Aligned_cols=352 Identities=16% Similarity=0.157 Sum_probs=272.8
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.+|..+.+++|+|+||.| |++||||.++ +..+||+||++.+|+++|+++...++ + ..+
T Consensus 605 ~~p~~i~~g~G~~l~D~d---------------G~~ylD~~~g-~~~lGH~hp~v~~Ai~~q~~~l~~~~---~---~~~ 662 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNR---------------GRAYLDCFNN-VCHVGHAHPRVVAAAARQAARLNTNT---R---YLH 662 (1013)
T ss_pred CCCceEEEeeecEEEECC---------------CCEEEEcccC-hhhcCCCCHHHHHHHHHHHhhcCCcC---C---cCC
Confidence 456678999999999999 9999999865 47899999999999999999863332 1 245
Q ss_pred hhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhh---hcccCCCcEEEEeCCCchHHHHHHHhcCC------------e
Q 040324 146 ALHNELEECVARFVGK--PAAIVFGMGYVTNSSIL---PVLMGKGSLIISDSLNHNSIVNGARGSGA------------T 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~---~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~------------~ 208 (488)
+...+|.++|++.++. +.++|++||+|||+.++ +..+++.++|.+...+|+.+..++.+++. .
T Consensus 663 ~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~ 742 (1013)
T PRK06148 663 DAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDH 742 (1013)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCC
Confidence 6678999999998864 57899999999996654 45578888899999999998766554321 1
Q ss_pred E--------EEeeCC--CH-------HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHH
Q 040324 209 I--------RVFQHN--TP-------SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICK 267 (488)
Q Consensus 209 v--------~~~~~~--d~-------~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~ 267 (488)
+ ...+++ +. +++++.++.... .+...++||+|||++.+|.+.+ |++++++|+
T Consensus 743 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-------~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~ 815 (1013)
T PRK06148 743 VEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAA-------KGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVR 815 (1013)
T ss_pred ceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhc-------cCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHH
Confidence 1 111222 21 345555542111 1246899999999999998885 999999999
Q ss_pred HcCcEEEEEccccccccCCCCC-C-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhC-CCCcccCC
Q 040324 268 RYKAYTYLDEAHSIGAVGKTGR-G-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNC-PAHLYATS 342 (488)
Q Consensus 268 ~~g~~li~DE~~s~g~~g~~g~-~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~-~~~~~~~~ 342 (488)
+||+++|+||||+ +|||+|. + .++++|+.| ||+ |++|++|++. |++++++++++.+.... +.+||+
T Consensus 816 ~~g~llI~DEVqt--GfGRtG~~~~a~e~~gv~P---Div--t~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~-- 886 (1013)
T PRK06148 816 AAGGVCIADEVQV--GFGRVGSHWWAFETQGVVP---DIV--TMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFG-- 886 (1013)
T ss_pred HhCCEEEEEeccc--CCCCCCCcchhhhhcCCCc---cee--eecccccCCcceEEEEEcHHHHhhccCCCccccCCC--
Confidence 9999999999999 9999996 4 788999998 777 9999998633 88999999999886532 444555
Q ss_pred CCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecC--CCCCCeEEEEeCCc--------ch
Q 040324 343 ISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLG--DNDSPVMPIMVYNP--------AK 410 (488)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~--~~~~~~~~~~~~~~--------~~ 410 (488)
+||++|++++++|+++ ..+++.+++++++++|+++|+++ ..++.+ ...+.++.+.+..+ ..
T Consensus 887 gnpla~aaa~a~L~~i-------~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~ 959 (1013)
T PRK06148 887 GNPVSCAIGLAVLDII-------EDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAI 959 (1013)
T ss_pred CCHHHHHHHHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHH
Confidence 9999999999999999 34578899999999999999876 222221 12346667776421 12
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
...+.+.|+++||++.+.+ +. .+.+||.||+.+|++|+|+++++|++++.++
T Consensus 960 ~~~i~~~~~~~Gvl~~~~g----~~-~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 960 ARYVKNGARERGILIGTEG----PH-DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHhCCeEEeccC----CC-CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 4578899999999998432 22 3799999999999999999999999999875
No 92
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=4.9e-38 Score=313.67 Aligned_cols=348 Identities=44% Similarity=0.737 Sum_probs=282.5
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILP 179 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~ 179 (488)
++||+|||++|||...+ |++.+++++++++++...+..+...|..+...++++.++++++.++.+++++|++++..++.
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~ 79 (349)
T cd06454 1 KKVLNFCSNDYLGLANH-PEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLS 79 (349)
T ss_pred CCceecccCCccccCCC-HHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHH
Confidence 47899999999999965 89999999999987665544455557788889999999999999889999999999887788
Q ss_pred cccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCCh
Q 040324 180 VLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKL 259 (488)
Q Consensus 180 ~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l 259 (488)
++.++|+.|+++.++|+++...++..|+++..++..|.+++++.+++.. ++.++++|+++++++++|...++
T Consensus 80 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--------~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 80 TLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREAR--------RPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred HhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecCCCHHHHHHHHHHhh--------ccCCCeEEEEeccccCCCCccCH
Confidence 8889999999999999999988899999999888889999999887631 01256788889999999999999
Q ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeCHHHHHHHHhhCCCCcc
Q 040324 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLY 339 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~~~~~~~~~~~~~~~~~ 339 (488)
++|+++|+++|+++|+||+|+.|.+++.+... ........+.|++++|++|++|..||++++++++++.+......+.+
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~gG~i~~~~~~~~~~~~~~~~~~~ 230 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGV-EEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIF 230 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCCh-hhhccccccCcEEEeechhhhcccCCEEECCHHHHHHHHHhchhhhc
Confidence 99999999999999999999877666554432 22334456679999999999998889999999998888765544444
Q ss_pred cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHH
Q 040324 340 ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECL 419 (488)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 419 (488)
+.+.++..++++.++|+.+. ..+...+++.++.+++.+.|+++|+++..+..+.+.++.+.......++.+.|.
T Consensus 231 ~~~~~~~~~~a~~~~l~~~~------~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 304 (349)
T cd06454 231 STSLPPAVAAAALAALEVLQ------GGPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALL 304 (349)
T ss_pred cCCCCHHHHHHHHHHHHHHh------cCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHH
Confidence 44588888888889998763 135678899999999999999998877665444433443333455678999999
Q ss_pred HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 420 KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 420 ~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
++||.+.+.+++..+.+.+.+|++++..+|++|+++++++|+++
T Consensus 305 ~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 305 ERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred hCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 99999987655443344579999999889999999999999864
No 93
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=1.2e-38 Score=325.34 Aligned_cols=347 Identities=18% Similarity=0.222 Sum_probs=272.7
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|.++.+++|.++||.| |++||||+| ++++++||+||.+.+++.+++++...... ..+.
T Consensus 17 ~~~~~~~~~~g~~~~d~d---------------G~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~----~~~~ 77 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVD---------------GNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL----GFFY 77 (413)
T ss_pred CCCceEEeeecCEEEeCC---------------CCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC----cccC
Confidence 567889999999999999 999999976 67788999999999999999976432211 1135
Q ss_pred hhhHHHHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhcc---cCCCcEEEEeCCCchHHHHHHHhcCC------------
Q 040324 145 LALHNELEECVARFVG--KPAAIVFGMGYVTNSSILPVL---MGKGSLIISDSLNHNSIVNGARGSGA------------ 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~---~~~~~~Vl~~~~~h~~~~~~~~~~g~------------ 207 (488)
.+...+++++++++++ .++++++++|++|+..+++.+ .++..+|+.+..+|+++......++.
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLP 157 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 7888999999999998 578999999999998777765 45555566666788887777666543
Q ss_pred eEEEeeCC-----------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcE
Q 040324 208 TIRVFQHN-----------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAY 272 (488)
Q Consensus 208 ~v~~~~~~-----------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~ 272 (488)
.+..++++ |+++|++.++++ +.+.++|+++++++++|.+.+ +++|+++|++||++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 227 (413)
T cd00610 158 GVLHVPYPYRYRPPAELADDLEALEEALEEH----------PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGIL 227 (413)
T ss_pred CcEEeCCCccccchhhHHHHHHHHHHHHhcC----------CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 35677887 788888877642 235778999999999998877 99999999999999
Q ss_pred EEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHH--HhhCCCCcccCCCCHHH
Q 040324 273 TYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYL--KYNCPAHLYATSISPPA 347 (488)
Q Consensus 273 li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~--~~~~~~~~~~~~~~p~~ 347 (488)
+|+||+|+ ++|++|.+ ..+++++.| |++ |+||+++++ .|++++++++++.+ ....+. .+.+.+|+.
T Consensus 228 li~Dev~~--g~g~~g~~~~~~~~~~~~---d~~--t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~--~t~~~~~~~ 298 (413)
T cd00610 228 LIADEVQT--GFGRTGKMFAFEHFGVEP---DIV--TLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHG--GTFGGNPLA 298 (413)
T ss_pred EEEecccc--CCCcCcchhhHhhcCCCC---CeE--EEcccccCccccEEEEEcHHHHHhhccCCCCCC--CCCCcCHHH
Confidence 99999999 78888876 566777766 555 999999862 28889999999986 222233 334489999
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC----CeecCCCCCCeEEEEeCCc--------chHHHHH
Q 040324 348 AEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG----FEVLGDNDSPVMPIMVYNP--------AKVSSFS 415 (488)
Q Consensus 348 ~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 415 (488)
++++.++|+.+. .+++.++++++++++++.|+++. ........++++++.+... .....++
T Consensus 299 ~~a~~a~l~~l~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (413)
T cd00610 299 CAAALAVLEVLE-------EEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKII 371 (413)
T ss_pred HHHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHH
Confidence 999999999984 24677888999999999988762 2222233467788877654 3567899
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+.|+++||.+.+.+ .+.+|+++++.+|++|+++++++|++++
T Consensus 372 ~~l~~~gv~v~~~~-------~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 372 KAALERGLLLRPSG-------GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred HHHHHCCeEEeecC-------CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 99999999998632 3689999999999999999999998763
No 94
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=1.5e-38 Score=322.82 Aligned_cols=345 Identities=16% Similarity=0.154 Sum_probs=263.8
Q ss_pred CCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhh
Q 040324 69 RPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLAL 147 (488)
Q Consensus 69 ~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (488)
.++.+++|+++||.| |++||||+|+ ....+||+||++.+|+++|+++++...... -+++.
T Consensus 29 ~~~~~a~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~----~~~~~ 89 (427)
T TIGR00508 29 YPVESADGVELTLDD---------------GRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGG----FTHKP 89 (427)
T ss_pred ceEEeeeeeEEEeCC---------------CCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccc----cCCHH
Confidence 457899999999999 9999999654 456778889999999999999875433211 13456
Q ss_pred HHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhccc---------CCCcEEEEeCCCchHHHHHHHhcCCe--------
Q 040324 148 HNELEECVARFVGK--PAAIVFGMGYVTNSSILPVLM---------GKGSLIISDSLNHNSIVNGARGSGAT-------- 208 (488)
Q Consensus 148 ~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~~---------~~~~~Vl~~~~~h~~~~~~~~~~g~~-------- 208 (488)
..++.++|++.++. +++++++||++|+..+++... ++..+|.+...+|+.+.....+++..
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 68899999998764 579999999999976665432 35567888889999887666554421
Q ss_pred -----EEEe--e---------CCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC-CCCCC----ChHHHHHHHH
Q 040324 209 -----IRVF--Q---------HNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM-EGELC----KLPEIITICK 267 (488)
Q Consensus 209 -----v~~~--~---------~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~-~G~~~----~l~~l~~l~~ 267 (488)
...+ + ++|++++++.+.+. +...++||+||++++ +|.+. +|++|+++|+
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~----------~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~ 239 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELH----------SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCK 239 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhc----------CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHH
Confidence 0011 1 11456677777542 136889999998544 45433 5999999999
Q ss_pred HcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHhhC-----CCCc
Q 040324 268 RYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKYNC-----PAHL 338 (488)
Q Consensus 268 ~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~~~-----~~~~ 338 (488)
+||++||+||||+ ++|++|++ ..+++++.| ||+ +++|+++++ .+++++++++++.+.... ++.+
T Consensus 240 ~~~~llI~DEv~t--G~Gr~G~~~~~~~~~v~p---Di~--~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T 312 (427)
T TIGR00508 240 QYDILLIADEIAT--GFGRTGKLFACEHAGVVP---DIL--CVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPT 312 (427)
T ss_pred HcCCEEEEecccc--CCCcCCccchhhhcCCCC---CEE--EechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCC
Confidence 9999999999998 89999988 778899987 777 799999642 377888999999887532 3334
Q ss_pred ccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCe-ecCC--CCCCeEEEEeCCcchHHHHH
Q 040324 339 YATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFE-VLGD--NDSPVMPIMVYNPAKVSSFS 415 (488)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 415 (488)
++ ++|+.+++++++|+++. .++..+++++++++|+++|++++.. .... ..++++.+.+.++.....+.
T Consensus 313 ~~--g~p~~~aaa~a~l~~l~-------~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~ 383 (427)
T TIGR00508 313 FM--GNPLACAVAEASLAILL-------EGEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQ 383 (427)
T ss_pred CC--cCHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHH
Confidence 44 89999999999999984 2356789999999999999887421 1111 23688888887665677899
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
++|+++||++.+.+ +.+|++||+.+|++|||++++++++++++
T Consensus 384 ~~l~~~Gv~~~~~~--------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 384 KKFVEQGVWIRPFG--------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHCCeEEEecC--------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 99999999997422 47999999999999999999999999854
No 95
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=5.6e-38 Score=321.55 Aligned_cols=352 Identities=15% Similarity=0.183 Sum_probs=262.5
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.+..+.+++|+|+||.| |++||||.| ...+.+||+||.+.+|+++|+++...... . ...+
T Consensus 36 ~~~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~---~~~~ 96 (451)
T PRK06918 36 IPTFAQSANGALVTDVD---------------GNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF-N---VMMY 96 (451)
T ss_pred CCceEEeccccEEEeCC---------------CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc-c---cccc
Confidence 35678999999999999 999999954 46678999999999999999998633221 0 1235
Q ss_pred hhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhcCCe-----------
Q 040324 146 ALHNELEECVARFVGK---PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (488)
+...+|.++|++.++. +++++++||++|++.+++ .++++..+|.+...+|+.+..++..++..
T Consensus 97 ~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~ 176 (451)
T PRK06918 97 EPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFA 176 (451)
T ss_pred HHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCC
Confidence 6678999999999863 478999999999976554 45688888888999999988777654421
Q ss_pred --EEEeeCCC-----------------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHH
Q 040324 209 --IRVFQHNT-----------------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITI 265 (488)
Q Consensus 209 --v~~~~~~d-----------------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l 265 (488)
+..++..+ ++.+++.+.... .+.++++||+||+++.+|.+.+ +++|+++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l 248 (451)
T PRK06918 177 PEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV--------APETIAAVVMEPVQGEGGFIVPSKKFVQEVRNI 248 (451)
T ss_pred CCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc--------CCCceEEEEECcccCCCCCccCCHHHHHHHHHH
Confidence 12222211 112333332111 1247899999999999997664 9999999
Q ss_pred HHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccC
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYAT 341 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~ 341 (488)
|++||++||+||+|+ +||++|.. ..+++++.| |++ ||||++++ | |++++++++++.+....+..+++
T Consensus 249 ~~~~gillI~DEV~t--g~gr~g~~~a~~~~~v~p---Di~--t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~~~T~~- 319 (451)
T PRK06918 249 CSEHGILFVADEIQT--GFARTGKYFAIEHFDVVP---DLI--TVSKSLGA-GVPISGVIGRKEIMDESAPGELGGTYA- 319 (451)
T ss_pred HHHcCCEEEEecccc--CcCccCceehhHhcCCCC---CEE--eeehhhcC-CCccEEEEEcHHHHhccCCCCcCcCCC-
Confidence 999999999999999 99999875 567778777 655 99999984 4 99999999999886555555565
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeec--CCCCCCeEEEEeC-C-------cc
Q 040324 342 SISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVL--GDNDSPVMPIMVY-N-------PA 409 (488)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~--~~~~~~~~~~~~~-~-------~~ 409 (488)
++|+.+++++++|+++. .+++.+++++.+++++++|+++ ..+.. ....+.++.+.+. + ..
T Consensus 320 -g~~l~~aaa~a~l~~i~-------~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~ 391 (451)
T PRK06918 320 -GSPLGCAAALAVLDIIE-------KENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKT 391 (451)
T ss_pred -cCHHHHHHHHHHHHHHH-------HCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHH
Confidence 99999999999999883 3456677777778888877765 22211 1122444444442 1 12
Q ss_pred hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 410 KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
....+.+.|+++||++.+.+ .. .+++||+||+.+|+++||+++++|+++++++
T Consensus 392 ~~~~l~~~~~~~Gvlv~~~~----~~-~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 392 LTANICKEANKRGLLLLSAG----TY-GNVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred HHHHHHHHHHHCCeEEeecC----CC-CCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 35578888899999998532 11 2789999999999999999999999999876
No 96
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.5e-38 Score=320.73 Aligned_cols=351 Identities=15% Similarity=0.163 Sum_probs=253.2
Q ss_pred hhhcccCCC--ccCCCCceEEEe-eccccCCcccccccCCcceeEEec-cccccCCCCCCccch--HHHHHHHHHcCCCC
Q 040324 62 RVQDCFGRP--LSSAPDAWFDVV-ERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCT--PRVIDSLKKYSHST 135 (488)
Q Consensus 62 ~~~~~~~~~--i~~~~G~~~~~~-dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~--~a~~~~l~~~~~~~ 135 (488)
.....||.+ +.+++|+++||. | |++||||. +.....+||+||++. +|+++|+++.....
T Consensus 12 ~~~~~~p~~~~~~~a~G~~l~D~~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~ 76 (431)
T TIGR03251 12 MLTDGFDLVLDLDRSRGSVLVDARD---------------GRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNK 76 (431)
T ss_pred hhccCCceeeEEEeccCCEEEECCC---------------CCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcc
Confidence 455567766 499999999996 9 99999994 456788999999999 99999998853211
Q ss_pred CCcccCCCChhhHHHHHHHHHHHh---CCCCeEEeCCcHHHHhhhhhcc---c-------C-----CCcEEEEeCCCchH
Q 040324 136 CSSRVDGGTLALHNELEECVARFV---GKPAAIVFGMGYVTNSSILPVL---M-------G-----KGSLIISDSLNHNS 197 (488)
Q Consensus 136 ~~~~~~~g~~~~~~~l~~~la~~~---g~~~~i~~~sGs~a~~~~~~~~---~-------~-----~~~~Vl~~~~~h~~ 197 (488)
.+.. . ...+...++.++|++.. +.+++++.+||++|++.+++.. + + +..+|.+...+|+.
T Consensus 77 ~~~~-~-~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~ 154 (431)
T TIGR03251 77 PSNS-D-VYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGR 154 (431)
T ss_pred cccC-C-CCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCc
Confidence 1111 1 23455577888888875 2367899999999997766544 2 2 24567777889999
Q ss_pred HHHHHHhcCCeEEE-------------ee-----C-------------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEE
Q 040324 198 IVNGARGSGATIRV-------------FQ-----H-------------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVV 246 (488)
Q Consensus 198 ~~~~~~~~g~~v~~-------------~~-----~-------------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~ 246 (488)
+..++..++..... .+ . ++++++++.+... +.+.++||+
T Consensus 155 t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----------~~~iAaviv 224 (431)
T TIGR03251 155 SGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAER----------PHDIACFIA 224 (431)
T ss_pred chhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhC----------CCcEEEEEE
Confidence 88777665521000 01 0 0122333333321 247899999
Q ss_pred cCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcccEEE
Q 040324 247 EGIYSMEGELC----KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYGGYIA 321 (488)
Q Consensus 247 e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~ 321 (488)
||+++.+|.+. +|++|+++|++||++||+||+|+ ++|++|.+ .++++|+.| |++ +++|++ ..+|++.
T Consensus 225 EPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t--G~GrtG~~~a~~~~gv~P---Di~--~~gK~~-~~~g~~~ 296 (431)
T TIGR03251 225 EPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT--GVGLTGTAWAYQQLGVQP---DIV--AFGKKT-QVCGIMA 296 (431)
T ss_pred eccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh--ccCccchHHHHHhcCCCC---CEE--EecccC-ccceEEe
Confidence 99999999876 49999999999999999999999 99999987 778899988 777 899997 3346665
Q ss_pred eCH--HHHHHH-H-hhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----C-Cee
Q 040324 322 GSK--ELIQYL-K-YNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----G-FEV 392 (488)
Q Consensus 322 ~~~--~~~~~~-~-~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g-~~~ 392 (488)
+.+ ++++.. . ...+..+|+ ++|+.+++++++|+++. .+++.+++++++++|++.|+++ + +..
T Consensus 297 ~~~i~~~~~~~~~~~~~~~~T~~--gnpl~~aaa~a~L~~l~-------~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~ 367 (431)
T TIGR03251 297 GRRVDEVADNVFAVPSRLNSTWG--GNLVDMVRATRILEIIE-------EERLVDNARVQGAHLLARLHELAAEFPHLVS 367 (431)
T ss_pred cchHHHhhhhcccCccccCCCCC--CCHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHHhCcccee
Confidence 543 222211 1 112334444 99999999999999983 3457778888888888888764 2 221
Q ss_pred cCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 393 LGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.....+.++.+.+........+.+.|+++||++.+. +.+.+||+||+.+|++|||+++++|+++
T Consensus 368 ~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~-------g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 368 NPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLGC-------GERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred cccccceeEEEEeCCHHHHHHHHHHHHhCCeEEecC-------CCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 112235677777765555668999999999999742 2367999999999999999999999763
No 97
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.5e-37 Score=316.35 Aligned_cols=344 Identities=19% Similarity=0.210 Sum_probs=262.3
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEecccc-ccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYN-YLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLA 146 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~-~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~ 146 (488)
+..+.+++|.++||.| |++||||+++. ...+||+||.+.+++.+++++. ... ....+
T Consensus 33 ~~~~~~a~G~~l~d~d---------------G~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~-~~~------~~~~~ 90 (426)
T PRK00062 33 PRFIERAKGAYLYDVD---------------GNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG-LSF------GAPTE 90 (426)
T ss_pred CeEEEeCcCCEEEeCC---------------CCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC-CcC------CCCCH
Confidence 4567899999999999 99999997653 3567888999999999999883 221 12456
Q ss_pred hHHHHHHHHHHHh-CCCCeEEeCCcHHHHhhhhhc---ccCCCcEEEEeCCCchHHHHHHHhcC----------------
Q 040324 147 LHNELEECVARFV-GKPAAIVFGMGYVTNSSILPV---LMGKGSLIISDSLNHNSIVNGARGSG---------------- 206 (488)
Q Consensus 147 ~~~~l~~~la~~~-g~~~~i~~~sGs~a~~~~~~~---~~~~~~~Vl~~~~~h~~~~~~~~~~g---------------- 206 (488)
...+|+++|++.+ +.+++++++||++|++.+++. ..++.++|..+..+|+.+......++
T Consensus 91 ~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~ 170 (426)
T PRK00062 91 LEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPE 170 (426)
T ss_pred HHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCc
Confidence 6678999999876 456899999999999776665 45667777788888887643333211
Q ss_pred ---CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccc
Q 040324 207 ---ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAH 279 (488)
Q Consensus 207 ---~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~ 279 (488)
.....++++|++++++.+++. +.+.++||+|++++++|.+.+ +++|+++|++||+++|+||||
T Consensus 171 ~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 240 (426)
T PRK00062 171 DFAKHTLTAPYNDLEAVEELFEEY----------GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVM 240 (426)
T ss_pred ccccceEEcCCCCHHHHHHHHHhC----------CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 124567789999999988652 236789999999999999988 999999999999999999999
Q ss_pred cccccCCCCCC-cchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHHHHhhCCCCcc-cCCCCHHHHHHHHHHH
Q 040324 280 SIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQYLKYNCPAHLY-ATSISPPAAEQIISAI 355 (488)
Q Consensus 280 s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~~~~~~~~~~~-~~~~~p~~~aa~~a~L 355 (488)
+ ++ ++|.+ ..+++++.| |++ ++||++|+ +.|++++++++++.+......+.+ +.+++|+.+++++++|
T Consensus 241 ~--G~-r~g~~~~~~~~~~~p---Di~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L 312 (426)
T PRK00062 241 T--GF-RVALGGAQGYYGVTP---DLT--TLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATL 312 (426)
T ss_pred h--cc-ccCCccHHHHhCCCc---chH--hhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHH
Confidence 9 77 66644 677888877 554 99999975 248889999999988643222222 2359999999999999
Q ss_pred HHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCc-------------chHHHHHHHH
Q 040324 356 QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNP-------------AKVSSFSREC 418 (488)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l 418 (488)
++++ .+++.++++++.+++++.|+++ ++.......+.++.+.+.++ ..+..+.+.|
T Consensus 313 ~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l 385 (426)
T PRK00062 313 KLLK-------EPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAM 385 (426)
T ss_pred HHHh-------cchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHH
Confidence 9983 2367888888999998888754 54432223467777766432 2245899999
Q ss_pred HHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 419 LKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 419 ~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+++||++.+.++ +.+++ ++.+|++||++++++++++++++
T Consensus 386 ~~~Gv~v~~~~~-------~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 386 LDEGVYLAPSQF-------EAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHCCeEeecCCc-------Cceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 999999986443 23555 46999999999999999998764
No 98
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=2.6e-37 Score=315.74 Aligned_cols=344 Identities=17% Similarity=0.163 Sum_probs=254.8
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
++|..+.+++|+++||.| |++||||.++ ....+||+||.+.+|+++|+++.. .+. ..
T Consensus 29 ~~p~~~~~~~G~~l~d~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~------~~ 86 (423)
T TIGR00713 29 PTPFFVARGKGAYLYDVD---------------GNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT-SYG------AP 86 (423)
T ss_pred CCCeeEEeccCCEEEeCC---------------CCEEEEccccccccccCCCCHHHHHHHHHHHHhCC-cCC------CC
Confidence 456678999999999999 9999999654 456789999999999999998842 221 24
Q ss_pred hhhHHHHHHHHHHHhCC-CCeEEeCCcHHHHhhhhh---cccCCCcEEEEeCCCchHHHHHHHhc---------------
Q 040324 145 LALHNELEECVARFVGK-PAAIVFGMGYVTNSSILP---VLMGKGSLIISDSLNHNSIVNGARGS--------------- 205 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~-~~~i~~~sGs~a~~~~~~---~~~~~~~~Vl~~~~~h~~~~~~~~~~--------------- 205 (488)
++...+|+++|+++++. +++++++||++|++.+++ .++++..+|.....+|+........+
T Consensus 87 ~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~ 166 (423)
T TIGR00713 87 TEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGV 166 (423)
T ss_pred CHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCC
Confidence 55668999999998864 578899999999976555 45577666666777777654332211
Q ss_pred ----CCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEc
Q 040324 206 ----GATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 206 ----g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE 277 (488)
+..+..++++|+++|++.+.+. +.+.++|++|++++++|.+.+ +++|+++|++||++||+||
T Consensus 167 ~~~~~~~~~~~~~~d~~~l~~~i~~~----------~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DE 236 (423)
T TIGR00713 167 PEDFAKLTLVLPYNDLEALEEVFEEY----------GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDE 236 (423)
T ss_pred CcccccceEEeCCCCHHHHHHHHHHc----------CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEc
Confidence 1124567788999999988742 125789999999999998776 8999999999999999999
Q ss_pred cccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhC---CCCcccCCCCHHHHHHH
Q 040324 278 AHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNC---PAHLYATSISPPAAEQI 351 (488)
Q Consensus 278 ~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~---~~~~~~~~~~p~~~aa~ 351 (488)
+|+ ++ ++|.. ..+++++.| |++ ||||++|++ .|++++++++++.+.... +..++ +++|+.++++
T Consensus 237 v~~--g~-r~g~~~~~~~~~~~p---Di~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~--~~~~~~~aaa 306 (423)
T TIGR00713 237 VMT--GF-RVALGGAQEYFGVEP---DLT--TLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTL--SGNPLAMAAG 306 (423)
T ss_pred ccc--cc-ccCcchhHHHhCCCc---chh--hhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCC--CCCHHHHHHH
Confidence 998 77 66644 667788887 555 899999842 399999999999886422 33344 4999999999
Q ss_pred HHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH----hCCCeecCCCCCCeEEEEeCCc-------------chHHHH
Q 040324 352 ISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ----KMGFEVLGDNDSPVMPIMVYNP-------------AKVSSF 414 (488)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~----~~g~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 414 (488)
+++|+.+++ +++.++++++.+++++.|+ +.++.......+.++.+.+..+ .....+
T Consensus 307 ~a~l~~~~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 379 (423)
T TIGR00713 307 LATLKLLDE-------EGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKF 379 (423)
T ss_pred HHHHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHH
Confidence 999999842 2355666666666666554 4455432223456677655421 123468
Q ss_pred HHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 415 SRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 415 ~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
++.|+++||++.+.++ +.+||+++ +|++|+++++++|+++++++
T Consensus 380 ~~~l~~~Gv~v~~~~~-------~~~~l~~~--~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 380 FHEMLDKGVFLPPSQF-------EACFLSAA--HTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHCCeEEecCCc-------cceeeECC--CCHHHHHHHHHHHHHHHhhC
Confidence 8899999999864322 34788874 89999999999999998653
No 99
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=8.4e-37 Score=307.16 Aligned_cols=334 Identities=16% Similarity=0.208 Sum_probs=256.2
Q ss_pred cCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCCh
Q 040324 67 FGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTL 145 (488)
Q Consensus 67 ~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~ 145 (488)
.|.++.+++|+|+||.| |++||||.|+ +++++|| ||++.+|+.++++++.....
T Consensus 11 ~~~~~~~~~G~~l~d~d---------------g~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~--------- 65 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTD---------------GKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPN--------- 65 (375)
T ss_pred CCceEEEeeeCEEEeCC---------------CCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccC---------
Confidence 45678999999999999 9999999765 6889999 78999999999988643221
Q ss_pred hhHHHHHHHHHHHhCC-C--CeEEeCCcHHHHhhhhhcc---cCCCcEEEEeCCCchHHHHHHHhcCCe-----------
Q 040324 146 ALHNELEECVARFVGK-P--AAIVFGMGYVTNSSILPVL---MGKGSLIISDSLNHNSIVNGARGSGAT----------- 208 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~-~--~~i~~~sGs~a~~~~~~~~---~~~~~~Vl~~~~~h~~~~~~~~~~g~~----------- 208 (488)
..+.++++++++.+.. . .+++++||++||..+++.. .++.++|.++..+|+++..++..++..
T Consensus 66 ~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~ 145 (375)
T PRK04260 66 LYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVP 145 (375)
T ss_pred ccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCC
Confidence 1224566677765432 2 3578899999997665554 566677777889999988877665432
Q ss_pred -EEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccc
Q 040324 209 -IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGA 283 (488)
Q Consensus 209 -v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~g~ 283 (488)
+...+++|++++++.+.+ ..++|++|++++++|.+.+ |+++.++|+++|+++|+||+|+ +
T Consensus 146 ~~~~~~~~dl~~l~~~l~~-------------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~--g 210 (375)
T PRK04260 146 HFSYAIFNDLNSVKALVNK-------------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT--G 210 (375)
T ss_pred CeEEeCCCCHHHHHHhcCC-------------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh--C
Confidence 222357799999887642 4678999999999998765 8999999999999999999998 7
Q ss_pred cCCCCCC-cchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhc
Q 040324 284 VGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIG 360 (488)
Q Consensus 284 ~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~ 360 (488)
+|++|.+ ..+++++.| |++ ||||++++ +.|++++++++++.+....+..+++ ++|+.++++.++|+.+.
T Consensus 211 ~g~~g~~~~~~~~~~~p---di~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~~aa~a~l~~~~- 282 (375)
T PRK04260 211 MGRTGKLYAFEHYGIEP---DIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSHGSTFG--GNKLSMAAASATLDIML- 282 (375)
T ss_pred CCcccchhhhHhhCCCC---CEE--EecccccCCcceEEEEEcHHHHhhcCCCCCCCCCC--cCHHHHHHHHHHHHHHH-
Confidence 9999876 556778877 555 99999975 3499999999988886544544554 89999999999999883
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCC
Q 040324 361 EDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLL 436 (488)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~ 436 (488)
.++++++++++.+++++.|.+. +........+.++++.+. ....++.++|.++||.+.+. +
T Consensus 283 ------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~l~~~Gi~v~~~-------~ 347 (375)
T PRK04260 283 ------TAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT--ADLSQLVEAARDKGLIVLTA-------G 347 (375)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEec--CcHHHHHHHHHhCCCEEecC-------C
Confidence 3466777788888888777654 211111124667777662 24668999999999998742 2
Q ss_pred CCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 437 LARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 437 ~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.+.+||+|++.+|++|+++++++|+++
T Consensus 348 ~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 348 TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 378999999999999999999999875
No 100
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=6.3e-36 Score=304.80 Aligned_cols=354 Identities=16% Similarity=0.165 Sum_probs=264.4
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||.+ +..+.+||+||.+.+++.++++++..... .. ..
T Consensus 22 ~~p~~~~~~~G~~l~d~d---------------G~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~---~~-~~ 82 (425)
T PRK08088 22 IHPIFADRAENCRVWDVE---------------GREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF---QV-LA 82 (425)
T ss_pred CCCceEEeeeeCEEEeCC---------------CCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccc---cc-cC
Confidence 456778999999999999 999999954 46678999999999999999998753221 11 12
Q ss_pred hhhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhh---hhcccCCCcEEEEeCCCchHHHHHHHhcCCeE---------
Q 040324 145 LALHNELEECVARFVGK---PAAIVFGMGYVTNSSI---LPVLMGKGSLIISDSLNHNSIVNGARGSGATI--------- 209 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~---~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v--------- 209 (488)
.+...++.+.+++..+. +++++++||++|++.+ ++.+++++++|.+...+|+.+......++...
T Consensus 83 ~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK08088 83 YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCC
Confidence 34556899999988764 4789999999988544 45567888888888889999877666543210
Q ss_pred ----E--Eee--CCC------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHHHcCc
Q 040324 210 ----R--VFQ--HNT------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICKRYKA 271 (488)
Q Consensus 210 ----~--~~~--~~d------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~~~g~ 271 (488)
. .++ .++ +++|++.+++.. .+...++|++||++++.|.+.+ +++|+++|++||+
T Consensus 163 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~ 234 (425)
T PRK08088 163 PGHVYRALYPCPLHGVSEDDAIASIERIFKNDA--------APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGI 234 (425)
T ss_pred CCCcEEcCCCccccCccHHHHHHHHHHHHHhcc--------CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0 111 111 445666664210 1236889999999999998776 9999999999999
Q ss_pred EEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccCCCCHHHH
Q 040324 272 YTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYATSISPPAA 348 (488)
Q Consensus 272 ~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 348 (488)
++|+||+|+ ++|++|.+ ..+.+++.| |+ .||||+++++- ||+++++++++.+....+..+++ ++|+.+
T Consensus 235 ~lI~Dev~~--g~g~~g~~~~~~~~~~~p---di--~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~~--~~~~~~ 305 (425)
T PRK08088 235 MLIADEVQT--GAGRTGTLFAMEQMGVAA---DL--TTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYA--GNPIAC 305 (425)
T ss_pred EEEEecccc--CCCcCcchhHHhhcCCCC---CE--EEEeccccCCCcceeeEecHHHHhhcCCCCCCCCCC--cCHHHH
Confidence 999999999 89998876 456677766 54 59999998422 99999999999987666655555 899999
Q ss_pred HHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCC--------cchHHHHHH
Q 040324 349 EQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYN--------PAKVSSFSR 416 (488)
Q Consensus 349 aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 416 (488)
+++.++|+.+. .+++.+++++..+++++.|.++ +........+.++++.+.. ......+.+
T Consensus 306 ~a~~~~l~~~~-------~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~ 378 (425)
T PRK08088 306 AAALAVLKVFE-------QENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVA 378 (425)
T ss_pred HHHHHHHHHHH-------hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHH
Confidence 99999999873 3456777777777777777654 2211111226778888732 234678999
Q ss_pred HHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 417 ECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 417 ~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.|+++||.+.+.+ .. .+.+||+|++.+|++||++++++|+++++..
T Consensus 379 ~~~~~Gv~~~~~~----~~-~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 379 RARDKGLILLSCG----PY-YNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred HHHhCCCEEecCC----CC-CCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 9999999887421 11 3789999999999999999999999998754
No 101
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=6.2e-36 Score=303.60 Aligned_cols=343 Identities=16% Similarity=0.212 Sum_probs=261.9
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+++||.| |++||||+++ ....+||+||.+.+++.+++++..... . .+.
T Consensus 20 ~~~~~~~~~~G~~~~d~d---------------g~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~----~-~~~ 79 (396)
T PRK02627 20 RLPIAFVRGEGARLWDDD---------------GKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTS----N-LYY 79 (396)
T ss_pred CCCceEEeeeeCEEEeCC---------------CCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccc----c-ccC
Confidence 456778999999999999 9999999653 334566668999999999998753221 1 124
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc---CC-----CcEEEEeCCCchHHHHHHHhcCC---------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM---GK-----GSLIISDSLNHNSIVNGARGSGA--------- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~---~~-----~~~Vl~~~~~h~~~~~~~~~~g~--------- 207 (488)
.+...++++.++++.+.++++++++|++|+..+++.+. ++ ..++..+..+|+....+....+.
T Consensus 80 ~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 159 (396)
T PRK02627 80 IEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEP 159 (396)
T ss_pred CHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCC
Confidence 67778999999999888899999999999987777543 33 34556667777776666555432
Q ss_pred ---eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcccc
Q 040324 208 ---TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 208 ---~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~~s 280 (488)
.+..++++|++++++.+.+ +.++|+++++++++|... ++++|+++|++||++||+||+|+
T Consensus 160 ~~~~~~~~~~~d~~~l~~~i~~-------------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~ 226 (396)
T PRK02627 160 LVEGFIYVPFNDIEALKAAITD-------------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT 226 (396)
T ss_pred CCCCceEeCCCCHHHHHHhcCC-------------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc
Confidence 2355677899999888742 467888899999888533 39999999999999999999999
Q ss_pred ccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHH
Q 040324 281 IGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQ 356 (488)
Q Consensus 281 ~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (488)
++|++|.+ ..+.+++.| |++ ||||++++ | |++++++++++.+....+..+++ .+|+.++++.++|+
T Consensus 227 --g~g~~g~~~~~~~~~~~p---di~--t~sK~~~~-G~rig~~~~~~~~~~~~~~~~~~~t~~--~~~~~~~aa~~~l~ 296 (396)
T PRK02627 227 --GMGRTGKLFAYQHYGIEP---DIM--TLAKGLGG-GVPIGAVLAKEKVADVFTPGDHGSTFG--GNPLACAAALAVIE 296 (396)
T ss_pred --CCCccCceeeehhcCCCC---CEE--EEcchhhC-CcccEEEEEcHHHHhccCCCCCCCCCC--CCHHHHHHHHHHHH
Confidence 89998875 456677776 555 89999984 4 99999999998886544544555 89999999999999
Q ss_pred HHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--Cee--cCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCC
Q 040324 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEV--LGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPA 432 (488)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~ 432 (488)
.+. .++..++++++.+++++.|+++. ++. .....+.++++.+ .....++++.|+++||.+.+.+
T Consensus 297 ~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~--~~~~~~~~~~l~~~Gv~v~~~~--- 364 (396)
T PRK02627 297 IIE-------EEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIEL--DRPAAEIVKKALEKGLLINVTG--- 364 (396)
T ss_pred HHh-------hccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEe--cCcHHHHHHHHHHCCeEEeecC---
Confidence 873 24567778888888888877652 211 1122356667766 2346789999999999998522
Q ss_pred ccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 433 TPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 433 ~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.+++||+|++.+|++++++++++|+++++++
T Consensus 365 ----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 365 ----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 3679999999999999999999999988754
No 102
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=1.2e-36 Score=309.34 Aligned_cols=342 Identities=16% Similarity=0.199 Sum_probs=245.4
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
.+|..+.+++|+|+||.| |++||||. +.....+||+||.+.+|+++|+++... +. ..
T Consensus 29 ~~p~~~~~~~G~~l~D~d---------------G~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~------~~ 86 (431)
T PRK06209 29 LAPGFIQRGSGAHVWDVD---------------GNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-FT------RP 86 (431)
T ss_pred CCCeEEEeccCCEEEeCC---------------CCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC-CC------CC
Confidence 345668899999999999 99999995 456678999999999999999998531 11 13
Q ss_pred hhhHHHHHHHHHHHhC-CCCeEEeCCcHHHHhhhhhc---ccCCCcEEEE-eCCCchH---HHHHHHhc-C------CeE
Q 040324 145 LALHNELEECVARFVG-KPAAIVFGMGYVTNSSILPV---LMGKGSLIIS-DSLNHNS---IVNGARGS-G------ATI 209 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g-~~~~i~~~sGs~a~~~~~~~---~~~~~~~Vl~-~~~~h~~---~~~~~~~~-g------~~v 209 (488)
.....+|.++|++.++ .+++++++||++|++.+++. ++++..++.+ ...+|+. +......+ + ..+
T Consensus 87 ~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~ 166 (431)
T PRK06209 87 SAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALT 166 (431)
T ss_pred CHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccc
Confidence 3344578999999875 46899999999999766553 4566544444 2344431 11000011 1 124
Q ss_pred EEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCC
Q 040324 210 RVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~ 289 (488)
..+++||+++|++++++. +...++||+|+++++.+...+|++|+++|++||++||+||||+ ++++++.
T Consensus 167 ~~~~~~d~~~l~~~l~~~----------~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t--G~~~~~~ 234 (431)
T PRK06209 167 VTFRYNDIASLEALFEDH----------PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT--GFRWHMR 234 (431)
T ss_pred cccCCCCHHHHHHHHHhC----------CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc--cCCcCcc
Confidence 567899999999998752 2367899999999986555569999999999999999999998 8887766
Q ss_pred CcchhcCCCCCCccEEEcccccccCC--cccEEEeCHHHHHH--HHhh--CCC--CcccCCCCHHHHHHHHHHHHHHhcc
Q 040324 290 GVCELLGVDTSDVDIMMGTFSKSFGS--YGGYIAGSKELIQY--LKYN--CPA--HLYATSISPPAAEQIISAIQVVIGE 361 (488)
Q Consensus 290 ~~~~~~~v~p~~~di~~~t~sK~~g~--~Gg~i~~~~~~~~~--~~~~--~~~--~~~~~~~~p~~~aa~~a~L~~i~~~ 361 (488)
+..+++++.| |++ |++|++|+ ++|++++++++++. +... ... +..+.++||+.|++++++|++++
T Consensus 235 g~~~~~gv~P---Di~--t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~-- 307 (431)
T PRK06209 235 GAQKLYGIVP---DLS--CFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR-- 307 (431)
T ss_pred hhhHHhCCCc---cee--eehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh--
Confidence 6666789987 665 99999986 56999999999987 3111 111 12233488999999999999994
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeC------Ccch--HHHHHHHHHHCCceEEeec
Q 040324 362 DGSCRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVY------NPAK--VSSFSRECLKQNVAIVTVG 429 (488)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~l~~~Gi~v~~~~ 429 (488)
.+++.+++.+++++|++.|+++ ++.......+..+++.+. .+.. ...+.++|+++|+++.+
T Consensus 308 -----~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~-- 380 (431)
T PRK06209 308 -----DEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS-- 380 (431)
T ss_pred -----ccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc--
Confidence 2457888999999999988763 433211111223333221 1112 23688899999997621
Q ss_pred CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 430 FPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 430 ~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+ +++..||++||+++++++++++.++
T Consensus 381 ----------l--~is~~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 381 ----------L--VVSYAHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred ----------c--cccccCCHHHHHHHHHHHHHHHHHH
Confidence 3 4456899999999999999999887
No 103
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-36 Score=281.56 Aligned_cols=352 Identities=19% Similarity=0.229 Sum_probs=265.0
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc-ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS-YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT 144 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s-~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~ 144 (488)
++|+.+.+++|+.++|.| |++|+||+| .....++|.+|++.+|+.+|+.+.++... .+ .
T Consensus 37 ~~pv~~~~gkg~kl~D~~---------------g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~----~~-~ 96 (433)
T KOG1401|consen 37 RYPVVIESGKGSKLFDPD---------------GKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSN----GY-F 96 (433)
T ss_pred CCceeeecceeeeeecCC---------------cceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccC----cc-c
Confidence 567888999999999998 999999965 45567888899999999999999876553 22 2
Q ss_pred hhhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhhccc---CC------CcEEEEeCCCchHHHHHHHhcCC-----
Q 040324 145 LALHNELEECVARFVGK---PAAIVFGMGYVTNSSILPVLM---GK------GSLIISDSLNHNSIVNGARGSGA----- 207 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~~~~---~~------~~~Vl~~~~~h~~~~~~~~~~g~----- 207 (488)
+....+|++.+.+.+++ ++++|++|||+||+.+++... .. ...|.+.+.+|+.+..++...+.
T Consensus 97 t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~ 176 (433)
T KOG1401|consen 97 TLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGL 176 (433)
T ss_pred cHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCC
Confidence 33368999999999854 689999999999987766542 22 24888999999999888775432
Q ss_pred -------eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEE
Q 040324 208 -------TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLD 276 (488)
Q Consensus 208 -------~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~li~D 276 (488)
.+....+||+.+|++.++.+. ...++||+||+++.+|.++ ++..|+++|+++|++||.|
T Consensus 177 ~~~p~~p~v~~~~ynd~t~l~k~~~~h~----------~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~D 246 (433)
T KOG1401|consen 177 PFDPIAPDVVTAEYNDSTALEKLFESHK----------GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFD 246 (433)
T ss_pred CCCCCCCceeecccCCHHHHHHHHHhCC----------CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEee
Confidence 244556789999999998741 2589999999999999877 3999999999999999999
Q ss_pred ccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCC---CCcccCCCCHHHHHH
Q 040324 277 EAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCP---AHLYATSISPPAAEQ 350 (488)
Q Consensus 277 E~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~---~~~~~~~~~p~~~aa 350 (488)
||++ +|||+|.+ +.+++++.| ||. |++|.+|++ -|+..+++++++.+....+ +.+|+ +||++|.+
T Consensus 247 EV~t--G~gR~g~~~a~e~~~~~P---DI~--t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~--gnpLacsa 317 (433)
T KOG1401|consen 247 EVQT--GLGRLGYGWAQEYFGVTP---DIT--TVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFS--GNPLACSA 317 (433)
T ss_pred hhhh--CccccchHHHHHHhCcCC---cce--eehhhccCCceeEEEeehHHHHhhcCCCCccccCcccC--CChhhhhH
Confidence 9999 99999987 889999999 777 999999763 3999999999999987665 76777 99999999
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCC----eecC-CCCCCeEEEEeCCcchHHHHHHHHHHCCceE
Q 040324 351 IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGF----EVLG-DNDSPVMPIMVYNPAKVSSFSRECLKQNVAI 425 (488)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 425 (488)
+..+|+.+ ...+.++++....+.|++.|.+... .+.+ ...+.++...+. .....+.+...+.|.++
T Consensus 318 ~~~~l~~l-------~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~--~p~~~~~d~~~~~~ll~ 388 (433)
T KOG1401|consen 318 GIKVLDEL-------KDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFE--GPVYKFADAAREQGLLI 388 (433)
T ss_pred HHHHHHHH-------cCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEe--echhhhhhhhhhhhHHH
Confidence 99999998 4477888888899999988877521 1111 111223333332 22223333333334333
Q ss_pred EeecCCCccCCCCeEEEee----cCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 426 VTVGFPATPLLLARARICI----SASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 426 ~~~~~~~~~~~~~~iRi~~----~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
...+-. ..+..+||.| ...+|+|.++++++++.+.+.++.
T Consensus 389 ~~~~~~---~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 389 LTLGKG---LLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred HHHhcc---cccceEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 321100 0012355555 234669999999999999988764
No 104
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=1.3e-34 Score=292.15 Aligned_cols=337 Identities=19% Similarity=0.271 Sum_probs=254.5
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEecc---ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGS---YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDG 142 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s---~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 142 (488)
++|..+.+++|.+++|.| |++||||+| ++++|. ++|.+.+++.++++++.... + .
T Consensus 8 ~~~~~~~~~~g~~~~~~~---------------g~~~id~~~~~~~~~lG~--~~p~v~~a~~~~~~~~~~~~---~-~- 65 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVN---------------GKEYLDFVAGIAVNSLGH--AHPKLVEALKEQLEKLVHVS---N-L- 65 (379)
T ss_pred CCCccEEEeecCEEEeCC---------------CCEEEEcCcchhhccCCC--CCHHHHHHHHHHHhhccccc---c-c-
Confidence 578889999999999999 999999987 466664 57999999999999864321 1 1
Q ss_pred CChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---cC----CCcEEEEeCCCc-hHHHHHHHhcC--------
Q 040324 143 GTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL---MG----KGSLIISDSLNH-NSIVNGARGSG-------- 206 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---~~----~~~~Vl~~~~~h-~~~~~~~~~~g-------- 206 (488)
...+...+|+++++++++.++++++++|++++..+++++ ++ +++.|++..++| +....+....+
T Consensus 66 ~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~ 145 (379)
T TIGR00707 66 YYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGF 145 (379)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccC
Confidence 245678999999999999999999999999997766644 23 356777666554 44333332222
Q ss_pred ----CeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEcc
Q 040324 207 ----ATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 207 ----~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~ 278 (488)
.....++++|++++++.+.+ +..+|+++++++++|... ++++|.++|++||+++|+||+
T Consensus 146 ~~~~~~~~~~~~~d~~~l~~~~~~-------------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~ 212 (379)
T TIGR00707 146 EPLVPGFSYAPYNDIESLKKAIDD-------------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEV 212 (379)
T ss_pred CCCCCCceeeCCCCHHHHHHHhhh-------------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 12334567799999988764 234666689998888654 389999999999999999999
Q ss_pred ccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHH
Q 040324 279 HSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISA 354 (488)
Q Consensus 279 ~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~ 354 (488)
|+ +++++|.+ ..+..++.| |++ ||||+++ +| ||+++++++++.+.......+++ .+++.++++.++
T Consensus 213 ~~--~~~~~g~~~~~~~~~~~~---d~~--t~sK~~~-~G~riG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~aa~aa 282 (379)
T TIGR00707 213 QT--GIGRTGKFFAYEHYGIEP---DII--TLAKGLG-GGVPIGATLAKEEVAEAFTPGDHGSTFG--GNPLACAAALAV 282 (379)
T ss_pred cc--CCCccchhhhHHhcCCCC---CEE--EEccccc-CCcccEEEEEcHHHHhhhcCCCCCCCCC--CCHHHHHHHHHH
Confidence 98 78887765 334556665 555 8999998 44 99999999999887654544554 789999999999
Q ss_pred HHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeec---CCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCC
Q 040324 355 IQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVL---GDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFP 431 (488)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 431 (488)
|+.+. ..+..+++++++++++++|++.+.... ....+.++++.+.. ...++.+.|.++||.+.+.+
T Consensus 283 L~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~Gv~v~~~~-- 351 (379)
T TIGR00707 283 LEVIE-------KERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEA--PCKDIVKKALEKGLLVNCAG-- 351 (379)
T ss_pred HHHHH-------hhhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecC--cHHHHHHHHHHCCcEEeeCC--
Confidence 99873 245778888899999998887633221 11235566666543 25689999999999998521
Q ss_pred CccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 432 ATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 432 ~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.+++||+++..+|++++++++++|+++
T Consensus 352 -----~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 352 -----PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred -----CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 378999999999999999999999875
No 105
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=3e-34 Score=306.14 Aligned_cols=352 Identities=13% Similarity=0.120 Sum_probs=252.9
Q ss_pred CCccCCCCc----eEEEeeccccCCcccccccCCcc----eeEEeccc-cccCCC-CCCccchHHHHHHHHHcCCCCCCc
Q 040324 69 RPLSSAPDA----WFDVVERYSNDNNKTLKRTNNVS----RCLNLGSY-NYLGFA-AADEYCTPRVIDSLKKYSHSTCSS 138 (488)
Q Consensus 69 ~~i~~~~G~----~~~~~dr~~~~~~~~~~~~~~g~----~~ld~~s~-~~lg~~-~~~~~v~~a~~~~l~~~~~~~~~~ 138 (488)
.+|.++.|. |++|.+ |+ +|||++|+ .+.++| |+||++.+|+.+|+.++++...
T Consensus 341 ~vi~~a~G~~~~~~~~d~~---------------G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~-- 403 (817)
T PLN02974 341 TVIDSRCGEDFSVYKPKTN---------------STCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMF-- 403 (817)
T ss_pred eEEEeeecCceeEEEECCC---------------CCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcccc--
Confidence 345677777 777766 87 99999554 567888 4599999999999999865442
Q ss_pred ccCCCChhhHHHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhhcc----c------------------CCCcEEEEeCC
Q 040324 139 RVDGGTLALHNELEECVARFVGK---PAAIVFGMGYVTNSSILPVL----M------------------GKGSLIISDSL 193 (488)
Q Consensus 139 ~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~~~----~------------------~~~~~Vl~~~~ 193 (488)
..-.++...+|.++|++..+. +++++.++|++|++.+++.. . ++..+|.....
T Consensus 404 --~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gs 481 (817)
T PLN02974 404 --PENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGS 481 (817)
T ss_pred --CccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCC
Confidence 112467778999999997652 47899999999997766543 1 24457778899
Q ss_pred CchHHHHHHHhcCCe--------E------EEe--e--------------CC--C-------------------------
Q 040324 194 NHNSIVNGARGSGAT--------I------RVF--Q--------------HN--T------------------------- 216 (488)
Q Consensus 194 ~h~~~~~~~~~~g~~--------v------~~~--~--------------~~--d------------------------- 216 (488)
||+.+..++.+++.. . ..+ | .+ +
T Consensus 482 YHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~ 561 (817)
T PLN02974 482 YHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPL 561 (817)
T ss_pred cCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhh
Confidence 999999887776421 1 001 0 00 0
Q ss_pred ----HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc-CCCCCCCCC----hHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 217 ----PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI-YSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 217 ----~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v-~s~~G~~~~----l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
.+.+++.|++.... ..+.+.++||+||+ ++.+|.+.+ +++|+++|++||++||+|||++ ||||+
T Consensus 562 ~~~~~~~le~~l~~~~~~-----~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~T--GfGRt 634 (817)
T PLN02974 562 AKAYRSYIEQQLDEYEAS-----AKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFT--GLWRL 634 (817)
T ss_pred hHHHHHHHHHHHHhhccc-----cCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeeccc--CCCcc
Confidence 12344444321110 01247899999996 788898774 9999999999999999999999 99999
Q ss_pred CCC-cchhcCCCCCCccEEEcccccccCCc---ccEEEeCHHHHHHHHh------hCCCCcccCCCCHHHHHHHHHHHHH
Q 040324 288 GRG-VCELLGVDTSDVDIMMGTFSKSFGSY---GGYIAGSKELIQYLKY------NCPAHLYATSISPPAAEQIISAIQV 357 (488)
Q Consensus 288 g~~-~~~~~~v~p~~~di~~~t~sK~~g~~---Gg~i~~~~~~~~~~~~------~~~~~~~~~~~~p~~~aa~~a~L~~ 357 (488)
|++ +++++|+.| ||+ +++|+++++ -|++++++++++.+.. ..++++|+ +||+.|++++++|++
T Consensus 635 G~~fa~e~~gv~P---DIi--~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~--gnpl~cAaala~L~~ 707 (817)
T PLN02974 635 GVESAWELLGCKP---DIA--CYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYT--AHPMGCAAAAKALQW 707 (817)
T ss_pred cchhhHHhcCCCC---CEE--eecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCC--cCHHHHHHHHHHHHH
Confidence 998 889999998 788 999999763 2889999999998852 12555665 999999999999999
Q ss_pred HhccCCCchHHHHHHHHHHHHHHHHHHHH-hC-CCeecCC--CCCCeEEEEeCCc--------chHHHHHHHHH-HCCce
Q 040324 358 VIGEDGSCRGAQKLARIRENSNFFRSKLQ-KM-GFEVLGD--NDSPVMPIMVYNP--------AKVSSFSRECL-KQNVA 424 (488)
Q Consensus 358 i~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~~-g~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~l~-~~Gi~ 424 (488)
+++++ ..+++.++..+..+++.+.|. .+ ..+.++. ..+.++.+.+..+ .....+.+.|+ ++|++
T Consensus 708 ~~~~~---~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~ 784 (817)
T PLN02974 708 YKDPS---TNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIY 784 (817)
T ss_pred HHccc---HHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEE
Confidence 95431 223455555666666666662 22 1222211 1245666666432 12457888899 89999
Q ss_pred EEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 425 IVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 425 v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+.+.+ +.+++.+|+.+++++++++++++.+.+
T Consensus 785 ~r~~G--------nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 785 ARPLG--------NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEecC--------CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 98532 689999999999999999999998865
No 106
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=4.7e-34 Score=281.59 Aligned_cols=274 Identities=20% Similarity=0.288 Sum_probs=217.3
Q ss_pred ccCCCCceEEEeeccccCCcccccccCCcceeEEec-cccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHH
Q 040324 71 LSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLG-SYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHN 149 (488)
Q Consensus 71 i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~ 149 (488)
|++++|.+++|.| |++||||+ ++...++||+||++.+++.+++++...... ....++...
T Consensus 2 i~~a~G~~l~d~d---------------G~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~----~~~~~~~~~ 62 (339)
T PF00202_consen 2 IERAEGAYLWDVD---------------GREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSF----SGFTHPEAA 62 (339)
T ss_dssp EEEEEBTEEEETT---------------SEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCST----TTSEEHHHH
T ss_pred eEEeecCEEEECC---------------CCEEEECCCCccceecCCCccccchhHHHHhhhcccccc----cceeccchh
Confidence 5689999999999 99999995 567789999999999999999998654331 123567778
Q ss_pred HHHHHHHHHhC--CCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcC------------
Q 040324 150 ELEECVARFVG--KPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSG------------ 206 (488)
Q Consensus 150 ~l~~~la~~~g--~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g------------ 206 (488)
+|.++|++.++ .+++++.+||++|++.+++.. .++..++.+...+|+.+..++.+++
T Consensus 63 ~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 142 (339)
T PF00202_consen 63 ELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLY 142 (339)
T ss_dssp HHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSS
T ss_pred hhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccc
Confidence 99999999994 467999999999997665544 3677777788899998877766543
Q ss_pred CeEEEeeCCCHHH----------HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC----ChHHHHHHHHHcCcE
Q 040324 207 ATIRVFQHNTPSH----------LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC----KLPEIITICKRYKAY 272 (488)
Q Consensus 207 ~~v~~~~~~d~~~----------Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~ 272 (488)
..+..+|.++... +++.+.+.. +...++||+||+++..|.+. .+++|+++|++||++
T Consensus 143 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 143 PGVVFVPFPDPAADEEEQACLNALEELIAALN---------ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp TTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH---------GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred cccccccCCccchhhhHHHHHHHHHHHHHhhc---------CCcEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 2356677777666 444443322 23789999999999988765 399999999999999
Q ss_pred EEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCc--ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHH
Q 040324 273 TYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELIQYLKYNCPAHLYATSISPPAAE 349 (488)
Q Consensus 273 li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~a 349 (488)
+|+|||++ ++||+|.. ..++++++| ||+ |++|+++++ .|++++++++++.+....+++|++ ++|+.|+
T Consensus 214 lI~DEV~t--G~gRtG~~~a~~~~gv~P---Div--~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~--g~p~~~a 284 (339)
T PF00202_consen 214 LIADEVQT--GFGRTGKFFASEHYGVDP---DIV--TFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFG--GNPLSCA 284 (339)
T ss_dssp EEEEETTT--TTTTTSSSSGHHHHTSSS---SEE--EEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTT--T-HHHHH
T ss_pred eecccccc--cccccCCccceecccccC---ccc--ccccchhhhhhcccccccchhhccccccccccccc--cchHhhh
Confidence 99999999 99999988 789999998 788 899999753 388999999999887666666766 9999999
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 350 QIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
+++++|+.+ +.+++.+++++.+++|+++|+++
T Consensus 285 aa~~~l~~~-------~~~~~~~~~~~~g~~l~~~L~~l 316 (339)
T PF00202_consen 285 AALATLEIL-------EEEDLLERVRELGERLREGLREL 316 (339)
T ss_dssp HHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHhh-------ccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 44567888899999999888765
No 107
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=9.4e-32 Score=265.54 Aligned_cols=305 Identities=17% Similarity=0.232 Sum_probs=229.3
Q ss_pred ccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhcccCCC
Q 040324 108 YNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVLMGKG 185 (488)
Q Consensus 108 ~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~~~~~ 185 (488)
|||||+++ ||.+.++..+++++|+ |+.+.+.+|++.+|+++|. ++++++++|+++|..++.++.++|
T Consensus 27 ~~ylgl~~-~~~~~~~~~~~~~~~~----------g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~g 95 (346)
T TIGR03576 27 YDLTGLAG-GFKIDEEDLELLETYV----------GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPG 95 (346)
T ss_pred cccccCCC-ChhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCC
Confidence 58899996 4899999999999984 5678899999999999998 789999999999999999999999
Q ss_pred cEEEE---eCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC---CCh
Q 040324 186 SLIIS---DSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL---CKL 259 (488)
Q Consensus 186 ~~Vl~---~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~---~~l 259 (488)
|.|++ +.++|.++..++++.|+++ +.++++++++. . +.++.+++++ .+|+|.+ .+|
T Consensus 96 d~Vli~~~d~p~~~s~~~~~~l~ga~~--~~~~~l~~l~~-~-------------~~~~lIiitg--~s~~G~v~~~~~L 157 (346)
T TIGR03576 96 RKVVHYLPEKPAHPSIPRSCKLAGAEY--FESDELSELKK-I-------------DGTSLVVITG--STMDLKVVSEEDL 157 (346)
T ss_pred CEEEECCCCCCCchhHHHHHHHcCCEE--eccCCHHHHhh-C-------------cCceEEEEEC--CCCCCcccCHHHH
Confidence 99985 3689999999999999875 34556655321 1 1244455544 4888988 579
Q ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccccccc-CCcccEEEeCHHHHHHHHhhCCCCc
Q 040324 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSF-GSYGGYIAGSKELIQYLKYNCPAHL 338 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~-g~~Gg~i~~~~~~~~~~~~~~~~~~ 338 (488)
++|+++|++||++|++||+|+.|..+..|.+....++ .|++++||||++ |.-|||+++++++++.+......+.
T Consensus 158 ~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~-----~divv~s~SKalaG~r~G~v~~~~~li~~l~~~~~~~~ 232 (346)
T TIGR03576 158 KRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLG-----ADLVVTSTDKLMDGPRGGLLAGRKELVDKIKSVGEQFG 232 (346)
T ss_pred HHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcC-----CcEEEeccchhccccceEEEEeCHHHHHHHHHhhcCcc
Confidence 9999999999999999999997665544544332333 378899999988 5567999999999999998887766
Q ss_pred ccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHH
Q 040324 339 YATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSREC 418 (488)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 418 (488)
++ .+|+.+++++++|+.+ ..+..++.++++.+.+.+.++.+ .+... .+.++++.+.. ....+++..+
T Consensus 233 ~s--~~~~~~~aa~~aL~~~-------~~~~~~~~l~~r~~~~~~~l~~~--~~~~~-~~~f~~~~~~~-~~~~~~~~~l 299 (346)
T TIGR03576 233 LE--AQAPLLAAVVRALEEF-------ELSRIRDAFKRKEEVYLRLFDKL--NVERT-PTGFVIKGVEE-EKLIEIGLDL 299 (346)
T ss_pred cC--ccHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHHHHHHHHhC--CCCcC-CCeEEEEeCCC-CCHHHHHHHH
Confidence 65 7888888899998764 23566778888888888888754 44333 33455555432 2223444444
Q ss_pred -HHCCceEEee-cCCCccCCCCeEEEeecCCCCHH---HHHHHHHHHHHHH
Q 040324 419 -LKQNVAIVTV-GFPATPLLLARARICISASHTKE---DLIEALEVISRIG 464 (488)
Q Consensus 419 -~~~Gi~v~~~-~~~~~~~~~~~iRi~~~~~~t~e---did~~l~~l~~~~ 464 (488)
.++||.+++. +|+ ..++++||++. ..++ +++.++++|++.+
T Consensus 300 l~~~gV~v~~~~~f~---~~~~~vRis~~--~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 300 LRNYGIITITAVGMP---GASKTLRFDLA--AKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHhCCEEEeCCcccC---CCCCeEEEEEe--cChHHhcCHHHHHHHHHhcc
Confidence 5569999972 222 23579999983 3343 7999999997754
No 108
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=1.3e-32 Score=248.62 Aligned_cols=358 Identities=13% Similarity=0.118 Sum_probs=267.6
Q ss_pred CCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhh
Q 040324 68 GRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLAL 147 (488)
Q Consensus 68 ~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~ 147 (488)
|..|.+++|.|++|.+ |++|||+. ||..-.||+||++++|...|+.....+. |+. ..++
T Consensus 30 P~kivRaq~QYmfDE~---------------g~~yLDCI-nNVaHvghchp~VV~A~~kQmat~~tN~---RFl--hd~l 88 (452)
T KOG1403|consen 30 PLKIVRAQGQYMFDEE---------------GTRYLDCI-NNVAHVGHCHPEVVRAGAKQMATISTNN---RFL--HDEL 88 (452)
T ss_pred chhhehhccceeeccC---------------cccHHHHh-hhhhhcccCCHHHHHHHHHHHhHhcccc---hhh--HHHH
Confidence 5568899999999988 99999976 4556788999999999999998764333 221 2233
Q ss_pred HHHHHHHHH-HHhCCCCeEEeCCcHHHHhh---hhhcccCCCcEEEEeCCCchHHHHHHHhcCC---------e-----E
Q 040324 148 HNELEECVA-RFVGKPAAIVFGMGYVTNSS---ILPVLMGKGSLIISDSLNHNSIVNGARGSGA---------T-----I 209 (488)
Q Consensus 148 ~~~l~~~la-~~~g~~~~i~~~sGs~a~~~---~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~---------~-----v 209 (488)
.++++.|. .+.+..-++|++||++||.. +++.+++..|.|.++..+|+.....+..+-. + +
T Consensus 89 -v~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHV 167 (452)
T KOG1403|consen 89 -VQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHV 167 (452)
T ss_pred -HHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEe
Confidence 34444444 34445679999999999955 4556788999999999999987666555411 0 1
Q ss_pred EEee----------CC--------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC----hHHHHHHHH
Q 040324 210 RVFQ----------HN--------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK----LPEIITICK 267 (488)
Q Consensus 210 ~~~~----------~~--------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~----l~~l~~l~~ 267 (488)
.+.| ++ ..+++++++.+....| ...+++|.|+.+|.+|.+.| ++++.+..+
T Consensus 168 APcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g-------~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr 240 (452)
T KOG1403|consen 168 APCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKG-------QGVAAFIAESLQSCGGQIIPPAGYFQAVADAVR 240 (452)
T ss_pred cCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcC-------CcHHHHHHHHHHhcCCcccCchhHHHHHHHHHh
Confidence 1111 11 1466788887766554 36788999999999998775 899999999
Q ss_pred HcCcEEEEEccccccccCCCCCC--cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccCCC
Q 040324 268 RYKAYTYLDEAHSIGAVGKTGRG--VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYATSI 343 (488)
Q Consensus 268 ~~g~~li~DE~~s~g~~g~~g~~--~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~~~ 343 (488)
.+|.+.|.||+|. +|||-|+. +.+.+++-| ||+ |++|.+|.+- +.+++.+++.+.+....-.+..+.++
T Consensus 241 ~aGGv~IaDEVQv--GFGRvG~hyWafq~y~fiP---DIV--tmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGG 313 (452)
T KOG1403|consen 241 SAGGVCIADEVQV--GFGRVGSHYWAFQTYNFIP---DIV--TMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGG 313 (452)
T ss_pred cCCCeEEeehhhh--cccccchhhhhhhhhcccc---chh--eecccCCCCCeeeEEeccHHHHHHhccccceehhccCC
Confidence 9999999999999 99999985 567788877 777 9999998743 99999999999998654444334449
Q ss_pred CHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCCCCC--CeEEEEeC--------CcchH
Q 040324 344 SPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGDNDS--PVMPIMVY--------NPAKV 411 (488)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~--~~~~~~~~--------~~~~~ 411 (488)
||++||+++++|+++ +.+++.++.++.+++|...|+++ ..+.+++..+ .++.+.+. +...+
T Consensus 314 nPVsCAv~laVm~v~-------e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A 386 (452)
T KOG1403|consen 314 NPVSCAVGLAVMRVC-------EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEA 386 (452)
T ss_pred CchhHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHH
Confidence 999999999999998 45778888888888888888765 3455555444 44445442 22234
Q ss_pred HHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCC
Q 040324 412 SSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYFP 473 (488)
Q Consensus 412 ~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~ 473 (488)
..+..+|.+. +|++.. .+| ..|.+.|-||.+.+++++++++..|++++..+..+..+
T Consensus 387 ~~~v~rlke~y~VLlsa----DGP-h~NilKiKPPmCFneena~e~v~~ld~iLT~mee~~~s 444 (452)
T KOG1403|consen 387 HWVVNRLKELYRVLLSA----DGP-HRNILKIKPPMCFNEENADEFVLGLDEILTVMEERLAS 444 (452)
T ss_pred HHHHHHHHHhhhEEEec----CCC-CCceeecCCCcccChhhHHHHHHHHHHHHHHHHHHHhh
Confidence 4677788877 899984 333 34899999999999999999999999998765544433
No 109
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=5.3e-31 Score=267.11 Aligned_cols=334 Identities=18% Similarity=0.206 Sum_probs=244.5
Q ss_pred ceeEEe-ccccccCCCCCCccchHHHHHHH-HHcCCCCCCcccCCCChhhHHHHHH----HHHHHhCCCCeEE-eCCcHH
Q 040324 100 SRCLNL-GSYNYLGFAAADEYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNELEE----CVARFVGKPAAIV-FGMGYV 172 (488)
Q Consensus 100 ~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~i~-~~sGs~ 172 (488)
++.||+ .|+||+ +|.+.+|+...+ .+|+.++++++...| .+.+.+||+ ++++++|.+.+++ ++||+.
T Consensus 28 ~~~~~l~~sen~~-----~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~ 101 (416)
T PRK13034 28 QDHLELIASENFT-----SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFGCDYANVQPHSGSQ 101 (416)
T ss_pred hcCeeecccccCC-----CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhCCCceEEecCCcHH
Confidence 466776 788886 689999999995 999999999999888 588899999 9999999998855 589999
Q ss_pred HHhhhhhcccCCCcEEEEeCCCchH-HHHHHHhc--CCeE--EEeeC------CCHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 173 TNSSILPVLMGKGSLIISDSLNHNS-IVNGARGS--GATI--RVFQH------NTPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 173 a~~~~~~~~~~~~~~Vl~~~~~h~~-~~~~~~~~--g~~v--~~~~~------~d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
||..++.+++++||.|+++...|++ ...+++.. +... ..+++ .|++++++.++.. .++
T Consensus 102 A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-----------~~k 170 (416)
T PRK13034 102 ANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEH-----------KPK 170 (416)
T ss_pred HHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhc-----------CCe
Confidence 9999999999999999999999988 34344432 2222 24444 5899999887641 134
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC-CcccEE
Q 040324 242 IMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-SYGGYI 320 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-~~Gg~i 320 (488)
++++.++++++. .++++|.++|++||++||+|++|++|.++. |. ..+. ..++|++++|++|+++ +.||++
T Consensus 171 lVi~~~~~~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~-g~----~~~~-~~~~Di~~~s~~K~l~g~~GG~v 241 (416)
T PRK13034 171 LIIAGFSAYPRE---LDFARFREIADEVGALLMVDMAHIAGLVAA-GE----HPNP-FPHAHVVTTTTHKTLRGPRGGMI 241 (416)
T ss_pred EEEECCCccccc---cCHHHHHHHHHHcCCEEEEeCcccccCccc-CC----CCCC-CCCceEEEEeCcccCCCCCCeEE
Confidence 444446777544 489999999999999999999999877763 22 1111 1347999999999994 557888
Q ss_pred EeCHH-HHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCC
Q 040324 321 AGSKE-LIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD-NDS 398 (488)
Q Consensus 321 ~~~~~-~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~ 398 (488)
+++++ +.+.++........+...++..++++++.++.+. ....++++++.++.++|++.|++.|+++..+ ..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~-----~~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~~~~t 316 (416)
T PRK13034 242 LTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQ-----PEFKTYAKQVIANAQALAEVLKERGYDLVSGGTDN 316 (416)
T ss_pred EECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhC-----hhHHHHHHHHHHHHHHHHHHHHHcCCEeccCCCCC
Confidence 77654 4444444322111122233444444444444431 1234678999999999999999999988643 467
Q ss_pred CeEEEEeCCcchH-HHHHHHHHHCCceEEe------ecCCCccCCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHHh
Q 040324 399 PVMPIMVYNPAKV-SSFSRECLKQNVAIVT------VGFPATPLLLARARICISA----SHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 399 ~~~~~~~~~~~~~-~~~~~~l~~~Gi~v~~------~~~~~~~~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~~ 467 (488)
+++++.+.+.... ..+.+.|.++||.+.. ..+|.. ...+|++++. .+|++|+++++++|++++...
T Consensus 317 ~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~---~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~~ 393 (416)
T PRK13034 317 HLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFV---TSGIRIGTPAGTTRGFGEAEFREIANWILDVLDDL 393 (416)
T ss_pred cEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCC---CCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhcC
Confidence 9999988765544 4566778888999986 233333 4689999988 788999999999999998743
No 110
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=3.9e-30 Score=258.11 Aligned_cols=321 Identities=16% Similarity=0.213 Sum_probs=239.6
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCCh-----hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEe
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTL-----ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISD 191 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~-----~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~ 191 (488)
-..+.+++.+++++|+.++++++...|+. +...++++.+|+++|.+.++++++|++++..++.++.++++.|+++
T Consensus 17 ~g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~ 96 (370)
T TIGR02539 17 GGVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLD 96 (370)
T ss_pred CCCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEEC
Confidence 45788999999999999888776654443 4567888889999999999999999999988899999999999999
Q ss_pred CCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHH
Q 040324 192 SLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIIT 264 (488)
Q Consensus 192 ~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~ 264 (488)
.+.|.+...+++..|++++.++++ |+++|++.+.+..... ..+..+|++..+.++.|.+.++++|.+
T Consensus 97 ~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~------~~~~~lv~~~~p~~~~G~~~~l~~i~~ 170 (370)
T TIGR02539 97 GLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDES------GKPPVLALLTHVDGEYGNLPDAGKVAK 170 (370)
T ss_pred CcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhcc------CCCcEEEEEECCCCCCccccCHHHHHH
Confidence 999999888899999999999986 8999999886521110 012345666788889999999999999
Q ss_pred HHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccC-
Q 040324 265 ICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYAT- 341 (488)
Q Consensus 265 l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~- 341 (488)
+|++||+++|+||+|+.|.++..+. ..++|++++|++|+++++| ||+++++++++.++.....+.+..
T Consensus 171 la~~~~~~livDea~~~g~~~~~~~---------~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~ 241 (370)
T TIGR02539 171 VCREKGVPLLLNCAYTVGRMPVSAK---------EIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEV 241 (370)
T ss_pred HHHHcCCeEEEECccccCCcCCCHH---------HcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCcccee
Confidence 9999999999999999754443321 1235899999999998766 999999999999877655433321
Q ss_pred -----CCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeec--CCCCCCeEEEEeCC-------
Q 040324 342 -----SISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVL--GDNDSPVMPIMVYN------- 407 (488)
Q Consensus 342 -----~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~------- 407 (488)
+.....+.++.++++... +..+ ...+..++.++|+++|+++|+++. .+..++++.+.++.
T Consensus 242 ~~~~~~~~~~~~~~~~~al~~~~-----~~l~-~~~~~~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~ 315 (370)
T TIGR02539 242 ELLGCTSRGAPIVTMMASFPHVV-----ERVK-RWDEEVKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQK 315 (370)
T ss_pred eeecccccccHHHHHHHHHHHHH-----HHHH-HHHHHHHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhh
Confidence 111223444555665421 0222 233444556799999999998864 24456776555432
Q ss_pred -cchHHHHHHHHHHCCce-EEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 408 -PAKVSSFSRECLKQNVA-IVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 408 -~~~~~~~~~~l~~~Gi~-v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
......+.+.|+++||. +. + ...+++|+++. .+|++|+++++++|++++++
T Consensus 316 ~~~~~~~~~~~L~e~GI~~ir----~---~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 316 HKRRGYFLYEELKKRGIHGIR----S---GQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hccccHHHHHHHHhCCCcccc----C---CcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 11234689999999997 33 1 11358999984 68999999999999998765
No 111
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=1.7e-29 Score=252.86 Aligned_cols=334 Identities=18% Similarity=0.212 Sum_probs=249.0
Q ss_pred ceeEEeccccccCCCC--CCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC--------CCeEEeCC
Q 040324 100 SRCLNLGSYNYLGFAA--ADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK--------PAAIVFGM 169 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~--~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~s 169 (488)
..+||++ .|.+. .++.+.+++.+++...+.++. ...|. .+|++++|+++.. ++.+++|+
T Consensus 28 ~~vi~l~----iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~---~~~G~----~~LReaia~~~~~~~~~~~~~~~eiivt~ 96 (393)
T COG0436 28 EDVIDLS----IGEPDFPTPEHIIEAAIEALEEGGTHYT---PSAGI----PELREAIAEKYKRRYGLDVDPEEEIIVTA 96 (393)
T ss_pred CCEEEeC----CCCCCCCCCHHHHHHHHHHHhcccCCCC---CCCCC----HHHHHHHHHHHHHHhCCCCCCCCeEEEeC
Confidence 4689987 45442 256788899888877432232 22254 6888888877643 24366666
Q ss_pred cHH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC-----C---CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 170 GYV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH-----N---TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 170 Gs~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~-----~---d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
|+. ++..++.++.++||.|+++.|+|.++...+++.|++++.++. + |++++++.+.+ ++
T Consensus 97 Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------------kt 164 (393)
T COG0436 97 GAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP------------KT 164 (393)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc------------cc
Confidence 555 568899999999999999999999999999999999999883 2 68888887764 24
Q ss_pred eEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCc
Q 040324 241 KIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSY 316 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~ 316 (488)
+ +|++....+++|.+.+ |++|+++|++||++||+||+|. .+-..|........+.+ .+.-|.+.||||+++.+
T Consensus 165 k-~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~--~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mt 241 (393)
T COG0436 165 K-AIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYE--ELVYDGAEHPSILELAGARDRTITINSFSKTYGMT 241 (393)
T ss_pred e-EEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhh--hcccCCCCcCCHhhcCCCcceEEEEeccccccccc
Confidence 5 5555566677787664 9999999999999999999999 66666642222222322 35678899999999999
Q ss_pred c---cEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Ce
Q 040324 317 G---GYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FE 391 (488)
Q Consensus 317 G---g~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 391 (488)
| ||++++ +++++.+.......+++ .+.+.+.++.++|+.-. ..+..+..++.++++++.+.+.|.+.+ +.
T Consensus 242 GwRvG~~v~~~~~l~~~~~~~~~~~~~~--~~~~~Q~aa~~aL~~~~---~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~ 316 (393)
T COG0436 242 GWRIGWVVGPPEELIAALRKLKSYLTSC--APTPAQYAAIAALNGPQ---SDEVVEEMREEYRERRDLLVEALNEIGGLS 316 (393)
T ss_pred ccceeEeecChHHHHHHHHHHHHhcccC--CCHHHHHHHHHHhcCcc---chHHHHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 9 999999 88888887544433333 77778888888877421 122456666889999999999999885 88
Q ss_pred ecC-CCCCCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCcc-CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 392 VLG-DNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATP-LLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 392 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~-~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.. +.++.++++.+....+..+|+.+|+++ ||.++|.. .++. .+++++||+. ..++++++++++++++.++..
T Consensus 317 ~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~-~Fg~~~g~~~vRis~--~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 317 VVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGS-GFGEPPGEGYVRLSL--ATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred eccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEeccc-ccCCCCCCCeEEEEE--ecCHHHHHHHHHHHHHHHHhc
Confidence 887 556677777776556788999999998 99999833 3333 4678999988 667799999999999988754
No 112
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=5.5e-28 Score=243.88 Aligned_cols=302 Identities=17% Similarity=0.242 Sum_probs=223.3
Q ss_pred CCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC------
Q 040324 141 DGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH------ 214 (488)
Q Consensus 141 ~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~------ 214 (488)
..+..+.+.++++.+|+++|.+.++++++|++++..++.++.++|+.|+++.+.|.+...+++..|++++.++.
T Consensus 58 ~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~ 137 (387)
T PRK09331 58 DQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEY 137 (387)
T ss_pred ccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCC
Confidence 34456678999999999999999999999999998888888999999999999999999888999999999887
Q ss_pred -CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcch
Q 040324 215 -NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCE 293 (488)
Q Consensus 215 -~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~ 293 (488)
.|++++++.+++...+. .+ ...+|+++.+.++.|.+.++++|.++|++||+++|+|++|+.|.++..+.
T Consensus 138 ~~d~~~l~~~l~~~~~~~-----~~-~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~---- 207 (387)
T PRK09331 138 KITPEAYAEKIEEVKEET-----GK-PPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGK---- 207 (387)
T ss_pred CcCHHHHHHHHHHhhhcc-----CC-CCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHH----
Confidence 27899999887532110 01 34466677888999999999999999999999999999999766553332
Q ss_pred hcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCc------ccCCCCHHHHHHHHHHHHHHhccCCCc
Q 040324 294 LLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHL------YATSISPPAAEQIISAIQVVIGEDGSC 365 (488)
Q Consensus 294 ~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~------~~~~~~p~~~aa~~a~L~~i~~~~~~~ 365 (488)
..++|++++|++|++++++ |++++++++++.+.....++. ++++.++...++++++++.+.
T Consensus 208 -----~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~------ 276 (387)
T PRK09331 208 -----KLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV------ 276 (387)
T ss_pred -----HcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH------
Confidence 1235899999999997643 999999998888755433221 233344444555567776653
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhC-CCeecCC--CCCCeEEEEeCC--------cchHHHHHHHHHHCCceEEeecCCCcc
Q 040324 366 RGAQKLARIRENSNFFRSKLQKM-GFEVLGD--NDSPVMPIMVYN--------PAKVSSFSRECLKQNVAIVTVGFPATP 434 (488)
Q Consensus 366 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 434 (488)
...+..++..++.+++++.|+++ |+++... ..++++.+.... .....++.+.|.++||...+.+
T Consensus 277 ~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~----- 351 (387)
T PRK09331 277 ERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPG----- 351 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccC-----
Confidence 22235566678889999999999 9988742 234555444331 1122468899999999854211
Q ss_pred CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 040324 435 LLLARARICISASHTKEDLIEALEVISRIGDLVGIK 470 (488)
Q Consensus 435 ~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (488)
....+|+. +..+|++|+++++++|++++++++..
T Consensus 352 -~~~i~ri~-~~g~t~~di~~l~~aL~~i~~~~~~~ 385 (387)
T PRK09331 352 -ATKEFKLS-TYGLTWEQVEYVADAFKEIAEKYGLE 385 (387)
T ss_pred -CceEEEEE-eccCCHHHHHHHHHHHHHHHHhcCCC
Confidence 12345554 45689999999999999998876543
No 113
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.97 E-value=5.7e-29 Score=249.66 Aligned_cols=338 Identities=26% Similarity=0.299 Sum_probs=244.9
Q ss_pred eeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC------C-CC-eEEeCCcHH
Q 040324 101 RCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG------K-PA-AIVFGMGYV 172 (488)
Q Consensus 101 ~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~-~~-~i~~~sGs~ 172 (488)
++|||+++++.....+ +.+.+++++..+ +.........++......+|++.+|++++ . .+ .+++++|+.
T Consensus 2 ~~I~l~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQN-PPPPAAIKAAIR--GAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSS-HHHHHHHHHHHH--HHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHH
T ss_pred CEEEEECCCCCCcccc-cchHHHHHHHHH--HhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccc
Confidence 5799998888766543 555555555544 01111222344556667999999999998 2 24 899999998
Q ss_pred HHhh-hhhcc-cCCCcEEEEeCCCchHHHHHHHhcCCeEEEee-------CCCHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 173 TNSS-ILPVL-MGKGSLIISDSLNHNSIVNGARGSGATIRVFQ-------HNTPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 173 a~~~-~~~~~-~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~-------~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
++.. +...+ .++++.|+++.|+|+.+...++..|.+++.++ +.|+++|++.+++...++ .+..+
T Consensus 79 ~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~-------~~~~~ 151 (363)
T PF00155_consen 79 AALFLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKG-------PRPKA 151 (363)
T ss_dssp HHHHHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTT-------ETEEE
T ss_pred cchhhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccc-------cccce
Confidence 8744 45555 67999999999999999999999999999999 559999999998743221 02456
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--- 317 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--- 317 (488)
|++.++++++|...+ +++|+++|++|++++|+||+|....++..+.... ...++.....+++.|+||++|.+|
T Consensus 152 v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRv 230 (363)
T PF00155_consen 152 VLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPI-RSLLDEDDNVIVVGSLSKSFGLPGLRV 230 (363)
T ss_dssp EEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHH-HGHHTTTSTEEEEEESTTTTTSGGGTE
T ss_pred eeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcc-cccccccccceeeeecccccccccccc
Confidence 667788999998887 4555555999999999999999655554322110 222222222688999999999999
Q ss_pred cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC
Q 040324 318 GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND 397 (488)
Q Consensus 318 g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 397 (488)
||+++++++++.++..... +. .+.+.++++.+.+..-.. ..++.++.+++++++.+++.+.|++.|+.+..+..
T Consensus 231 G~i~~~~~~~~~l~~~~~~--~~--~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~~ 304 (363)
T PF00155_consen 231 GYIVAPPELIERLRRFQRS--GL--SSSPMQAAAAAALSDPEL--VEKWLEELRERLRENRDLLREALEEIGITVLPPEA 304 (363)
T ss_dssp EEEEEEHHHHHHHHHHHHH--TT--SSHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHSB
T ss_pred ccccchhhhhhhhhhcccc--cc--ccchhhHHHHHhhhcccc--cccccccchhhHHHHHHHHHHHHHHhhhheeeccC
Confidence 9999999999998876542 22 255555554444443210 01155778899999999999999999999887766
Q ss_pred CCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHH
Q 040324 398 SPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVI 460 (488)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (488)
+.++++.+... +..+++++|+++ ||.+.+..++.. .+++|+++ ..++++++++++++|
T Consensus 305 ~~~~~~~~~~~-~~~~l~~~L~~~~gi~v~pg~~~~~---~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 305 GFFLWVRLDPN-DAEELAQELLEEYGILVRPGSYFGV---PGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp SSEEEEEESHH-HHHHHHHHHHHHHTEEEEEGGGGTS---TTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred ccEEEEEcccc-hHHHHHHHHHHhCCEEEEecCCCCC---CCEEEEEe-ccCCHHHHHHHHhhC
Confidence 66666655433 678999999999 999998555544 57999999 789999999999986
No 114
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=9.3e-27 Score=235.25 Aligned_cols=333 Identities=17% Similarity=0.200 Sum_probs=230.4
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC----CCeEEeCCcH
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK----PAAIVFGMGY 171 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sGs 171 (488)
...++|+.+.. .++ .++.+.+++.+.+.+....+.. ..|. .++++.+|+++ |. ++.+++++|+
T Consensus 24 ~~~i~l~~g~~-~~~-~~~~~~~~~~~~~~~~~~~Y~~---~~G~----~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~ 94 (382)
T PRK06108 24 EGVLPLWFGES-DLP-TPDFIRDAAAAALADGETFYTH---NLGI----PELREALARYVSRLHGVATPPERIAVTSSGV 94 (382)
T ss_pred CCeEEecCCCC-CCC-CCHHHHHHHHHHHhcCCCCCCC---CCCC----HHHHHHHHHHHHHHhCCCcCcceEEEeCChH
Confidence 34688874322 122 2466777777776552222221 1244 56666666654 52 2344445556
Q ss_pred HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 172 VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 172 ~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~--------d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
+++..++..+.++++.|+++.|+|+.+...++..|.+++.++.+ |++++++.+.. ..+++
T Consensus 95 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------------~~~~i 162 (382)
T PRK06108 95 QALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP------------RTRAL 162 (382)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc------------cceEE
Confidence 66677888888999999999999999998899999999888763 46677665532 14444
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCC-CCCccEEEcccccccCCcc--
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVD-TSDVDIMMGTFSKSFGSYG-- 317 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~-p~~~di~~~t~sK~~g~~G-- 317 (488)
++ ....+++|.+.+ +++|+++|+++|+++|+||+|+...++. +.......++. +.+..++++||||.+|.+|
T Consensus 163 ~l-~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 240 (382)
T PRK06108 163 FI-NSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWR 240 (382)
T ss_pred EE-ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccc
Confidence 44 466888897764 7899999999999999999999544431 22121222222 2345788999999998777
Q ss_pred -cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC
Q 040324 318 -GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD 395 (488)
Q Consensus 318 -g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 395 (488)
||+++++++++.+........ .+.+++.+.++.++|+. ..++.++.+++++++.+++.+.|++. |+.+..+
T Consensus 241 iG~~~~~~~~~~~~~~~~~~~~--~~~~~~~q~a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 313 (382)
T PRK06108 241 LGWLVAPPALGQVLEKLIEYNT--SCVAQFVQRAAVAALDE-----GEDFVAELVARLRRSRDHLVDALRALPGVEVAKP 313 (382)
T ss_pred eeeeeCCHHHHHHHHHHHHhcc--cCCChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCC
Confidence 999999999988875433212 22566666666666653 12245778888999999999999887 7777666
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.++.++++.+.......++++.|++ +||.+.+.. .+.+.+.+++||+++. +++++++++++|+++++
T Consensus 314 ~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~-~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 314 DGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGT-AFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCch-hhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 6666667777655566789998875 599998632 1233345799999965 89999999999988764
No 115
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.96 E-value=8.9e-27 Score=236.38 Aligned_cols=331 Identities=17% Similarity=0.205 Sum_probs=233.8
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC-------CC-CeEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG-------KP-AAIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-------~~-~~i~~~sG 170 (488)
+.+++||+++.+ .++ .++.+.+++.+.+.+.. .+... ..|. .+|++.+|++++ .+ +.+++++|
T Consensus 31 ~~~~i~l~~g~p-~~~-~~~~~~~~~~~~~~~~~-~~~y~--~~G~----~~lr~aia~~~~~~~g~~~~~~~~I~it~G 101 (399)
T PRK07681 31 GHKMIDLSIGNP-DMP-PADFVREEMVHTANQKE-SYGYT--LSGI----QEFHEAVTEYYNNTHNVILNADKEVLLLMG 101 (399)
T ss_pred CCCeEEeCCCCC-CCC-CCHHHHHHHHHHHhccc-cCCCC--CCCc----HHHHHHHHHHHHHHhCCCCCCCCeEEECCC
Confidence 567899875432 122 23556666666654321 11100 1233 678888888774 12 56777777
Q ss_pred HHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
+... ..++.+++++||.|+++.|+|+.+...++..|++++.++.+ |++++++.+.. ..++
T Consensus 102 ~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~k~ 169 (399)
T PRK07681 102 SQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD------------KAKM 169 (399)
T ss_pred cHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc------------cceE
Confidence 7654 66777888999999999999999999999999999998853 56666665532 2455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcc-
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~G- 317 (488)
++++ ...+++|.+.+ +++|+++|++||++||+||+|....+. +........++. .+..|+++||||.+|.+|
T Consensus 170 v~l~-~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 246 (399)
T PRK07681 170 MILN-FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFD--GNKPISFLSVPGAKEVGVEINSLSKSYSLAGS 246 (399)
T ss_pred EEEe-CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeC--CCCCCChhhCCCCcccEEEEeecccccCCccc
Confidence 5555 55888998887 888999999999999999999843332 222222222221 245788999999999888
Q ss_pred --cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 318 --GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 318 --g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
||+++++++++.+........++ .+.+...++.+.|+. ..+..++.++.++++.+.+.+.|++.|+.+..+
T Consensus 247 RiG~~i~~~~l~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p 319 (399)
T PRK07681 247 RIGYMIGNEEIVRALTQFKSNTDYG--VFLPIQKAACAALRN-----GAAFCEKNRGIYQERRDTLVDGFRTFGWNVDKP 319 (399)
T ss_pred eeEEEecCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 99999999999887654322233 556666666565542 113556777888999999999999988877667
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.++.++++.+.......++++.|++ +||.+.+.. .+.+.+.+++||++. .+++++++++++|+++
T Consensus 320 ~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~-~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 320 AGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGH-AFGPHGEGFVRIALV--QDEEVLQQAVENIRNS 385 (399)
T ss_pred CeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCCh-hhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 6778888887655567789999988 699999732 222233579999985 6789999999999873
No 116
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=1.3e-26 Score=233.59 Aligned_cols=333 Identities=17% Similarity=0.167 Sum_probs=230.7
Q ss_pred eeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C----CCeEEeCCc-H
Q 040324 101 RCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K----PAAIVFGMG-Y 171 (488)
Q Consensus 101 ~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~----~~~i~~~sG-s 171 (488)
..|+|+.+.. .++ .++.+.+++.++++..-..+ +......++++.+|++++ . ++.+++++| +
T Consensus 21 ~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~ 91 (378)
T PRK07682 21 GVISLGVGEP-DFV-TPWNVREASIRSLEQGYTSY-------TANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGAS 91 (378)
T ss_pred CeEEeCCCCC-CCC-CCHHHHHHHHHHHhcCCCCC-------CCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChH
Confidence 4577764322 122 23456777777665421122 122233678888888774 2 234555555 5
Q ss_pred HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 172 VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 172 ~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
+++..++.+++++||.|+++.|+|+.+...++..|.+++.++.+ |++++++.+.+ ..++++
T Consensus 92 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~~v~ 159 (378)
T PRK07682 92 QALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA------------KTKAIL 159 (378)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc------------ccEEEE
Confidence 56677888889999999999999999988888889988887642 57777776643 144555
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---c
Q 040324 245 VVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 245 i~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g 318 (488)
++ ...+++|.+.+ +++|.++|++|++++|+||+|....++..........+. .+..++++||||.||.+| |
T Consensus 160 ~~-~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~GlR~G 236 (378)
T PRK07682 160 LC-SPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGM--RERTILISGFSKGFAMTGWRLG 236 (378)
T ss_pred EE-CCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccc--cCCEEEEecCcccccChhhhhh
Confidence 44 55788888764 899999999999999999999944433211112222222 235789999999999878 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+......... +.+++.+.++.++|+. +..+.++.+++++++.+++.+.|++.|+.+..+.++
T Consensus 237 ~~~~~~~~i~~l~~~~~~~~~--~~~~~~q~a~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~g~ 309 (378)
T PRK07682 237 FIAAPVYFSEAMLKIHQYSMM--CAPTMAQFAALEALRA-----GNDDVIRMRDSYRKRRNFFVTSFNEIGLTCHVPGGA 309 (378)
T ss_pred hhhcCHHHHHHHHHHHHhhcc--CCCHHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCCee
Confidence 999999999988754332112 2556666666666642 122456788889999999999999998887766666
Q ss_pred CeEEEEeCC-cchHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 399 PVMPIMVYN-PAKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 399 ~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.++++.+.. .....++++.|+ ++||.+.+.. .+.+.+.+++||++. .+++++++++++|+++++++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~-~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 310 FYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGS-VFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred EEEEEeccCCCCCHHHHHHHHHHhCCEEEcCch-hhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhhc
Confidence 666665532 345678998887 5699999732 223334689999985 47999999999999988654
No 117
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.96 E-value=1.2e-26 Score=232.63 Aligned_cols=339 Identities=17% Similarity=0.181 Sum_probs=238.3
Q ss_pred ceeEEe-ccccccCCCCCCccchHHHHHHH-HHcCCCCCCcccCCCChhhHHHH----HHHHHHHhCCCC-eEEeCCcHH
Q 040324 100 SRCLNL-GSYNYLGFAAADEYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNEL----EECVARFVGKPA-AIVFGMGYV 172 (488)
Q Consensus 100 ~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~-~i~~~sGs~ 172 (488)
++.|++ .|-|++ .|.+.+++...+ .+|..++.+.+.+.|. +...++ .++..++++.+. .+-.-||+.
T Consensus 49 ~~~l~LiasEN~~-----s~~v~~a~~s~l~nkyaeg~pg~ryy~g~-~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~ 122 (493)
T PRK13580 49 RSSLKLIASENYS-----SLAVQLAMGNLLTDKYAEGTPGHRFYAGC-QNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD 122 (493)
T ss_pred hcCceEecccccC-----CHHHHHHhcccccccCcCCCCCccccCCC-chHHHHHHHHHHHHHHHhCCCcccccCCCcHH
Confidence 455776 444442 345555555443 3566677777766554 333333 344445777764 566779999
Q ss_pred HHhhhhhcccCC-------------------------------CcEEEEeCCCchHHHH---HHHhcC--CeEEEeeCC-
Q 040324 173 TNSSILPVLMGK-------------------------------GSLIISDSLNHNSIVN---GARGSG--ATIRVFQHN- 215 (488)
Q Consensus 173 a~~~~~~~~~~~-------------------------------~~~Vl~~~~~h~~~~~---~~~~~g--~~v~~~~~~- 215 (488)
||.++..++++| ||.|+.-+..|+.... ....++ .....++.+
T Consensus 123 An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~ 202 (493)
T PRK13580 123 ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDP 202 (493)
T ss_pred HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCc
Confidence 998888888765 7888876554433211 111122 223333322
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCC
Q 040324 216 -----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG 290 (488)
Q Consensus 216 -----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~ 290 (488)
|++++++.+.+. ++.++++ +..+. +...|+++|+++|++||++|++|++|++|.++ |..
T Consensus 203 ~~g~iD~d~l~~~~~~~------------~plvii~-g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Glig--g~~ 266 (493)
T PRK13580 203 DTGLLDYDEIAALAREF------------KPLILVA-GYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVA--GKV 266 (493)
T ss_pred ccCccCHHHHHHHHhhc------------CCEEEEe-Ccccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceec--ccc
Confidence 789999888762 4445554 33333 44669999999999999999999999998887 332
Q ss_pred cchhcCCCCCCccEEEccccccc-CCcccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHH
Q 040324 291 VCELLGVDTSDVDIMMGTFSKSF-GSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQ 369 (488)
Q Consensus 291 ~~~~~~v~p~~~di~~~t~sK~~-g~~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (488)
..+.++.. .++|++++|++|+| |..||++++++++.+.+... .++.++++.+|..++.+.+ +..+.. +...+
T Consensus 267 ~~~~~~~~-~~~D~vtgT~hKaL~GP~GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iAA~avA-l~e~~~----~ef~~ 339 (493)
T PRK13580 267 FTGDEDPV-PHADIVTTTTHKTLRGPRGGLVLAKKEYADAVDKG-CPLVLGGPLPHVMAAKAVA-LAEART----PEFQK 339 (493)
T ss_pred chhhcCCC-CCCcEEEeCChhhccCCCeEEEEecHHHHHHHhhC-CCcccCCCccHHHHHHHHH-HHHHhC----ccHHH
Confidence 22222222 36799999999999 66789999999999998644 4678887777766555554 555421 23366
Q ss_pred HHHHHHHHHHHHHHHHHhCCCeecC-CCCCCeEEEEeCCcchHH-HHHHHHHHCCceEEeecCCCccCC---CCeEEEee
Q 040324 370 KLARIRENSNFFRSKLQKMGFEVLG-DNDSPVMPIMVYNPAKVS-SFSRECLKQNVAIVTVGFPATPLL---LARARICI 444 (488)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~Gi~v~~~~~~~~~~~---~~~iRi~~ 444 (488)
+++++.+|.++|++.|++.|+.+.. ...++++++.+.+..... .+.+.|.+.||.+.+..+|+.|.+ .++|||++
T Consensus 340 y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~ 419 (493)
T PRK13580 340 YAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGT 419 (493)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEecc
Confidence 8999999999999999999998753 345799999997765444 677788899999999999999887 78999999
Q ss_pred cC----CCCHHHHHHHHHHHHHHHHHh
Q 040324 445 SA----SHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 445 ~~----~~t~edid~~l~~l~~~~~~~ 467 (488)
+. .++++|++++++.|.++++..
T Consensus 420 ~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 420 PALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred chhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 88 567999999999999998754
No 118
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.96 E-value=1.5e-26 Score=236.38 Aligned_cols=338 Identities=17% Similarity=0.165 Sum_probs=243.8
Q ss_pred ceeEEe-ccccccCCCCCCccchHHHHHHH-HHcCCCCCCcccCCCChhhHHHHHH----HHHHHhCC-CCeEEe----C
Q 040324 100 SRCLNL-GSYNYLGFAAADEYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNELEE----CVARFVGK-PAAIVF----G 168 (488)
Q Consensus 100 ~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~-~~~i~~----~ 168 (488)
++.|++ .|-|+. .|.+.+|....+ .+|+.+++++|...|+. .+.++|+ +.++.++. ++.+.+ +
T Consensus 34 ~~~l~liasen~~-----s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~ 107 (475)
T PLN03226 34 WKGLELIASENFT-----SRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRLDPEKWGVNVQPL 107 (475)
T ss_pred HcCeeEecCCccC-----CHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCCCcceeEEecCcC
Confidence 345776 444442 478899999998 88999999999888875 7777776 34444554 445545 8
Q ss_pred CcHHHHhhhhhcccCCCcEEEEeC------CCchHHHHHHHhcCCeEE----EeeCC------CHHHHHHHHHHHHhcCC
Q 040324 169 MGYVTNSSILPVLMGKGSLIISDS------LNHNSIVNGARGSGATIR----VFQHN------TPSHLEEVLREQIAEGQ 232 (488)
Q Consensus 169 sGs~a~~~~~~~~~~~~~~Vl~~~------~~h~~~~~~~~~~g~~v~----~~~~~------d~~~Le~~l~~~~~~~~ 232 (488)
||+.||.+++.++++|||.|+..+ .+|++...+.+.+..... ++++| |+++|++.+.+.
T Consensus 108 SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~----- 182 (475)
T PLN03226 108 SGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF----- 182 (475)
T ss_pred chHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc-----
Confidence 999999999999999999999854 456665555555555433 66777 999999988752
Q ss_pred CCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccc
Q 040324 233 PRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKS 312 (488)
Q Consensus 233 p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~ 312 (488)
..+.+|+.+++|++.+ ++++|+++|+++|++|++|++|+.|.++..+.. .. .+.+|++++|++|+
T Consensus 183 ------~pklIv~~~S~~s~~~---D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--~p----~~~~Div~~t~hK~ 247 (475)
T PLN03226 183 ------RPKLIIAGASAYPRDW---DYARMRKIADKVGALLMCDMAHISGLVAAQEAA--SP----FEYCDVVTTTTHKS 247 (475)
T ss_pred ------CCeEEEEecCcCCCcc---CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC--CC----CCCCeEEEecCccc
Confidence 1344555588887765 889999999999999999999998888755432 11 13579999999999
Q ss_pred c-CCcccEEEeCHHHH-----------HH--HHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHH
Q 040324 313 F-GSYGGYIAGSKELI-----------QY--LKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENS 378 (488)
Q Consensus 313 ~-g~~Gg~i~~~~~~~-----------~~--~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~ 378 (488)
| |..||+++++++.. +. .........+.++.++..+++..++|+.+.. ...+++.+++.++.
T Consensus 248 L~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~----~~~~~~~~~~~~na 323 (475)
T PLN03226 248 LRGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMT----PEFKAYQKQVKANA 323 (475)
T ss_pred ccCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhC----cCHHHHHHHHHHHH
Confidence 9 66789998887654 33 1222222345555677777888888998842 24567899999999
Q ss_pred HHHHHHHHhCCCeecCCC-CCCeEEEEeCC-cchHHHHHHHHHHCCceEEeecCCC--ccCCCCeEEE----eecCCCCH
Q 040324 379 NFFRSKLQKMGFEVLGDN-DSPVMPIMVYN-PAKVSSFSRECLKQNVAIVTVGFPA--TPLLLARARI----CISASHTK 450 (488)
Q Consensus 379 ~~l~~~L~~~g~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~~~--~~~~~~~iRi----~~~~~~t~ 450 (488)
++|++.|++.|+.+.... .++++.+.+.. .....++.+.|.+.||.+....-|. .+...+.+|+ ..+..+++
T Consensus 324 ~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~ 403 (475)
T PLN03226 324 AALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVE 403 (475)
T ss_pred HHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCH
Confidence 999999999999987542 34666665532 2345567777888899987522121 1223456888 35667899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 040324 451 EDLIEALEVISRIGDLV 467 (488)
Q Consensus 451 edid~~l~~l~~~~~~~ 467 (488)
+|++++.+.|.++++..
T Consensus 404 ~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 404 KDFEKVAEFLHRAVTIA 420 (475)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998853
No 119
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=1.8e-26 Score=231.83 Aligned_cols=323 Identities=18% Similarity=0.162 Sum_probs=237.1
Q ss_pred cceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-h
Q 040324 99 VSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (488)
Q Consensus 99 g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~ 175 (488)
+++++||+++ ++++. +|.+.+++.+.+.... .++ . ....++++.+|++++.+ +.+++++|+... .
T Consensus 31 ~~~~i~l~~~~~~~~~---~~~~~~a~~~~~~~~~-~y~-------~-~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 98 (367)
T PRK02731 31 IADIIKLASNENPLGP---SPKAIEAIRAAADELH-RYP-------D-GSGFELKAALAEKFGVDPERIILGNGSDEILE 98 (367)
T ss_pred CCceEEecCCCCCCCC---CHHHHHHHHHHHHhhc-CCC-------C-CcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 6789999876 55553 4678888888776531 121 1 11368999999999874 578888887765 4
Q ss_pred hhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC
Q 040324 176 SILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS 251 (488)
Q Consensus 176 ~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s 251 (488)
.++.++.++|+.|+++.|+|..+...+...|.+++.++.+ |++++++.+.+ ..+ +|++..+++
T Consensus 99 ~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~------------~~~-~v~l~~p~n 165 (367)
T PRK02731 99 LLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTP------------RTR-LVFIANPNN 165 (367)
T ss_pred HHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCC------------CCc-EEEEeCCCC
Confidence 5667778899999999999988887788889999888754 67777776642 134 444568899
Q ss_pred CCCCCCChHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHH
Q 040324 252 MEGELCKLPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKEL 326 (488)
Q Consensus 252 ~~G~~~~l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~ 326 (488)
++|.+.+++++.++++.+ |+++|+||+|....++..........+. .+..++++||||.+|.+| ||+++++++
T Consensus 166 ptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~ 243 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAK--FPNVVVTRTFSKAYGLAGLRVGYGIAPPEI 243 (367)
T ss_pred CCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhh--cCCEEEEeeehHhhcCcccceeeeeCCHHH
Confidence 999999999999999875 8999999999843332111112232222 234688899999998777 999999999
Q ss_pred HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeC
Q 040324 327 IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVY 406 (488)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 406 (488)
++.+...... +. .+++.+.++.+.|+. .+..++..++++++.+.+.+.|++.|+.+. +..++++++.+.
T Consensus 244 ~~~l~~~~~~--~~--~~~~~~~~a~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~g~~~~i~~~ 312 (367)
T PRK02731 244 IDALNRVRQP--FN--VNSLALAAAVAALDD------DAFVEKSRALNAEGMAWLTEFLAELGLEYI-PSVGNFILVDFD 312 (367)
T ss_pred HHHHHHccCC--CC--CCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCCceEEEEECC
Confidence 9988765432 23 566666666666542 124567778888889999999999887765 445788888775
Q ss_pred CcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 407 NPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
......++++.|.++||.+.+..... ..+++|+++ .+.+|+++++++|+++++
T Consensus 313 ~~~~~~~~~~~L~~~gI~v~~~~~~~---~~~~iRis~---~~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 313 DGKDAAEAYQALLKRGVIVRPVAGYG---LPNALRITI---GTEEENRRFLAALKEFLA 365 (367)
T ss_pred CCCCHHHHHHHHHHCCEEEEeCCCCC---CCCeEEEec---CCHHHHHHHHHHHHHHHh
Confidence 55567899999999999998743221 246899998 478999999999998764
No 120
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=3.9e-26 Score=232.02 Aligned_cols=333 Identities=15% Similarity=0.182 Sum_probs=234.6
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C---CC-eEEeCCcH
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K---PA-AIVFGMGY 171 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~-~i~~~sGs 171 (488)
...+||+.+.+ ++. .++.+.+++.+.+++....| +......+|++.++++++ . ++ .+++++|+
T Consensus 54 ~~~i~l~~G~P-~~~-~~~~~~~~~~~~~~~~~~~Y-------~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~ 124 (413)
T PLN00175 54 HGAINLGQGFP-NFD-GPDFVKEAAIQAIRDGKNQY-------ARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGC 124 (413)
T ss_pred CCeEecCCCCC-CCC-CCHHHHHHHHHHHhcCCCCc-------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCH
Confidence 45788874332 222 24567777777776521222 222333678888887763 2 22 56667765
Q ss_pred -HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 172 -VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 172 -~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
+++..++.+++++||.|+++.|.|..+...++..|++++.++.. |+++|++.+.. ..++ |
T Consensus 125 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~------------~~k~-i 191 (413)
T PLN00175 125 TEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTS------------KTRA-I 191 (413)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCc------------CceE-E
Confidence 45667777888999999999999999999999999999888753 56777776643 2444 4
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---c
Q 040324 245 VVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 245 i~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g 318 (488)
++....+++|.+.+ +++|+++|++||+++|+||+|....++.......++.+. .+..|+++||||.++.+| |
T Consensus 192 ~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~--~~~vi~i~SfSK~~~~~G~RiG 269 (413)
T PLN00175 192 LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGM--YERTVTMNSLGKTFSLTGWKIG 269 (413)
T ss_pred EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCC--cCcEEEEecchhhccCcchhee
Confidence 55677888898774 888999999999999999999844443221122222222 345788999999999888 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+........++ .+++.+.++.++|+. ...+.++.+++++++.+.+.+.|++.|+.+..+.++
T Consensus 270 ~~v~~~~l~~~l~~~~~~~~~~--~s~~~Q~a~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~ 342 (413)
T PLN00175 270 WAIAPPHLTWGVRQAHSFLTFA--TATPMQWAAVAALRA-----PESYYEELKRDYSAKKDILVEGLKEVGFKVYPSSGT 342 (413)
T ss_pred eeEeCHHHHHHHHHHHhhccCC--CCHHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 9999999999887654433333 666666666666642 122567788899999999999999999888777666
Q ss_pred CeEEEEeCC-c-chHHHHHHHHHHC-CceEEeec-C-CCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 399 PVMPIMVYN-P-AKVSSFSRECLKQ-NVAIVTVG-F-PATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 399 ~~~~~~~~~-~-~~~~~~~~~l~~~-Gi~v~~~~-~-~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.++++.+.. . ....++++.|+++ ||.+.|.. | +....+.+++||++. .+++++++++++|.++++
T Consensus 343 ~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 343 YFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHHHHh
Confidence 667776532 2 2357899998855 99999732 2 111234579999995 589999999999998765
No 121
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-25 Score=228.55 Aligned_cols=335 Identities=13% Similarity=0.094 Sum_probs=229.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCC-CCCCcccCCCChhhHHHHHHHHHHHh----CC---C-CeEEeCC
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSH-STCSSRVDGGTLALHNELEECVARFV----GK---P-AAIVFGM 169 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~-~~i~~~s 169 (488)
.+..+||+..++ +....++.+.+++.+.+...+. .|+. ..|. .+|++.+++++ |. + +.+++++
T Consensus 38 ~~~~i~l~~g~~-~~~~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~----~~LR~aia~~l~~~~g~~~~~~~~I~it~ 109 (405)
T PRK06207 38 PGRPVDFSHGDV-DAHEPTPGAFELFSAGVERGGVQAYTE---YRGD----ADIRELLAARLAAFTGAPVDAADELIITP 109 (405)
T ss_pred CCCceecCCcCC-CCCCCCHHHHHHHHHHHhcCCCccCCC---CCCC----HHHHHHHHHHHHHHhCCCCCCCCCEEEeC
Confidence 466778873322 1112346677777777755321 2221 1244 45666665554 63 2 4566666
Q ss_pred cHH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----------CHHHHHHHHHHHHhcCCCCCCCC
Q 040324 170 GYV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----------TPSHLEEVLREQIAEGQPRTRRP 238 (488)
Q Consensus 170 Gs~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----------d~~~Le~~l~~~~~~~~p~~~~~ 238 (488)
|+. +...++.+++.+||.|+++.|+|+.+...++..|++++.++.+ |+++|++.+++
T Consensus 110 Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------------ 177 (405)
T PRK06207 110 GTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA------------ 177 (405)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh------------
Confidence 554 5577888889999999999999999999999999998877642 67888877754
Q ss_pred CceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchh--cCCCCCCccEEEccccccc
Q 040324 239 WKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCEL--LGVDTSDVDIMMGTFSKSF 313 (488)
Q Consensus 239 ~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~--~~v~p~~~di~~~t~sK~~ 313 (488)
..++ |++....+++|.+.+ +++|+++|++||++||+||+|+ .+-..+...... +..+ .+..++++||||++
T Consensus 178 ~~k~-v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~--~~~~~~~~~~~~~~~~~~-~~~vi~i~SfSK~~ 253 (405)
T PRK06207 178 GVRV-FLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYS--RLLYDGTSYTHLRALPID-PENVITIMGPSKTE 253 (405)
T ss_pred cCeE-EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--ccccCCCCCCchhcCCCC-cCcEEEEecchhhc
Confidence 1344 444455788998886 8889999999999999999999 443333221111 1222 23468899999999
Q ss_pred CCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-C
Q 040324 314 GSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-G 389 (488)
Q Consensus 314 g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 389 (488)
+.+| ||+++++++++.+......+..+ .+.+.++++.+.|+. ...+.++.+++++++.+.+.+.|++. +
T Consensus 254 ~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~--~~~~~q~a~~~~l~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 326 (405)
T PRK06207 254 SLSGYRLGVAFGSPAIIDRMEKLQAIVSLR--AAGYSQAVLRTWFSE-----PDGWMKDRIARHQAIRDDLLRVLRGVEG 326 (405)
T ss_pred cCcccceEEEEcCHHHHHHHHHHHhHhccC--CCHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9777 99999999999887654432222 445555555555431 11134566777788888899999877 7
Q ss_pred CeecCCCCCCeEEEEeCC-cchHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 390 FEVLGDNDSPVMPIMVYN-PAKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.+..+.++.++|+.+.. .....++++.|+ ++||.+.+.. .+.+...+++||+++ .+++++++++++|.++++++
T Consensus 327 ~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~-~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 327 VFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGT-EFSPHTADSIRLNFS--QDHAAAVAAAERIAQLIERY 403 (405)
T ss_pred ceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCch-HhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 777666677888887754 235678999997 5699999732 122233579999995 47999999999999988765
No 122
>PLN02721 threonine aldolase
Probab=99.96 E-value=1.8e-26 Score=230.61 Aligned_cols=330 Identities=18% Similarity=0.176 Sum_probs=221.0
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILP 179 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~ 179 (488)
.+++||+|+.+. . .++.+.+++.+. ..+.. ..++.+...+|++.+|++++.+..+++++|++++..++.
T Consensus 5 ~~~~~~~~~~~~-~--~~~~~~~a~~~~--~~~~~------~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~ 73 (353)
T PLN02721 5 SRVVDLRSDTVT-K--PTDAMRAAMANA--EVDDD------VLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVL 73 (353)
T ss_pred hhhhhhhccccc-C--CCHHHHHHHHhc--cCCCc------ccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHH
Confidence 467888876543 2 245566665432 11110 113455578999999999999889999999999887777
Q ss_pred cccC-CCcEEEEeCCCchHHHH---HHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcC
Q 040324 180 VLMG-KGSLIISDSLNHNSIVN---GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIY 250 (488)
Q Consensus 180 ~~~~-~~~~Vl~~~~~h~~~~~---~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~ 250 (488)
++.+ +||.|+++.++|.+... .+...|.+++.++.+ |++++++.+++....+. + +..+|++++++
T Consensus 74 ~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~-----~-~~~~v~l~~~~ 147 (353)
T PLN02721 74 VHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHF-----P-TTRLICLENTH 147 (353)
T ss_pred HHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCC-----C-cceEEEEeccc
Confidence 7776 99999999999876654 356678888888753 78899988874321111 1 23455566655
Q ss_pred C-CCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCccc-EEEeCHH
Q 040324 251 S-MEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGG-YIAGSKE 325 (488)
Q Consensus 251 s-~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg-~i~~~~~ 325 (488)
+ ++|...+ +++|.++|++||++||+||+|..+.+...+...... ..++|.++.|++|+++++.| +++++++
T Consensus 148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~----~~~~d~~~~s~sK~l~~~~G~~~~~~~~ 223 (353)
T PLN02721 148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRL----VKAADSVSVCLSKGLGAPVGSVIVGSKS 223 (353)
T ss_pred cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHH----hhhCCEEEEecccccCCceeeEEecCHH
Confidence 4 4677655 789999999999999999999754432122211111 12457778899999987544 5778899
Q ss_pred HHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee-cCCCCCCeEEE
Q 040324 326 LIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEV-LGDNDSPVMPI 403 (488)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~~~~ 403 (488)
+++.+......+..+....+..+++++.+++.. .+..++..++.+++.+.|+++ ++.+ ..++.++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 294 (353)
T PLN02721 224 FIRKAKRLRKTLGGGMRQVGVLAAAALVALQEN---------VPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYF 294 (353)
T ss_pred HHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEE
Confidence 888765443221111111122333344444432 123344466788999999987 6654 33444566666
Q ss_pred EeCCc--chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 404 MVYNP--AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 404 ~~~~~--~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.+... .....++++|.++||.+.+. +.+++|++++..++++|+++++++|++++..
T Consensus 295 ~~~~~~~~~~~~~~~~L~~~gi~v~~~-------~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 295 DITDGSRITAEKLCKSLEEHGVLLMPG-------NSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred EccCCccccHHHHHHHHHhCCcEEecC-------CCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 66432 35678999999999999852 2468999999899999999999999988654
No 123
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=3.2e-26 Score=231.30 Aligned_cols=334 Identities=14% Similarity=0.172 Sum_probs=230.5
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC----CeEEeCCc-HHHH
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP----AAIVFGMG-YVTN 174 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sG-s~a~ 174 (488)
...+||+.+.. .++ .++.+.+++.+.++.....+. ...|..+..+.+++.+.++++.. +.+++++| +++.
T Consensus 30 ~~~i~l~~g~~-~~~-~~~~~~~~~~~~~~~~~~~Y~---~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFP-DFD-GPPYLVEALAYAMAAGHNQYP---PMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCC-CCC-CCHHHHHHHHHHHHcCCCCCC---CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 45688874322 222 245677777776654222222 12245444455555555555642 34666555 5667
Q ss_pred hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC
Q 040324 175 SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG 248 (488)
Q Consensus 175 ~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~ 248 (488)
..++..++.+||.|+++.|+|+.+...++..|.+++.++.+ |++++++.+.+ +.+++++ ..
T Consensus 105 ~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~~v~l-~~ 171 (386)
T PRK09082 105 FAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISP------------RTRLIIL-NT 171 (386)
T ss_pred HHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCc------------cceEEEE-eC
Confidence 77888888999999999999999999999999999998864 66777776643 2445544 46
Q ss_pred cCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCCC-CCCcchhcCCCCCCccEEEcccccccCCcc---cEEE
Q 040324 249 IYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGKT-GRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIA 321 (488)
Q Consensus 249 v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~~-g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~ 321 (488)
.++++|... ++++|.++|++||+++|+||+|....++.. +....++.+. .+..++++||||++|.+| ||++
T Consensus 172 p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~--~~~~i~~~S~SK~~~~~G~RiG~iv 249 (386)
T PRK09082 172 PHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPEL--RERAFVVSSFGKTYHVTGWKVGYCV 249 (386)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCc--cCcEEEEeechhhccchhhhhhhhh
Confidence 688899764 589999999999999999999985444321 1222232222 245788999999999888 9999
Q ss_pred eCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeE
Q 040324 322 GSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVM 401 (488)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 401 (488)
+++++++.+........++ .+.+.+.++.+.++. ..++.+++++.++++.+++.+.|++.++++..+.++.++
T Consensus 250 ~~~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~ 322 (386)
T PRK09082 250 APAALSAEFRKVHQYNTFT--VNTPAQLALADYLRA-----EPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQ 322 (386)
T ss_pred CCHHHHHHHHHHHhhhcCC--CChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCeeEEE
Confidence 9999999887754322333 555555544444431 123566778888999999999999988887766666777
Q ss_pred EEEeCC--cchHHHHHHHHH-HCCceEEeec-CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 402 PIMVYN--PAKVSSFSRECL-KQNVAIVTVG-FPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 402 ~~~~~~--~~~~~~~~~~l~-~~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
|+.+.. .....++++.|+ ++||.+.|.. |...+.+.+++||+++ .+++++++++++|.+
T Consensus 323 ~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 323 LVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred EEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 777652 345678999875 5599999843 4333445679999985 479999999998864
No 124
>PRK07324 transaminase; Validated
Probab=99.96 E-value=5.2e-26 Score=228.36 Aligned_cols=329 Identities=18% Similarity=0.168 Sum_probs=231.3
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC--CCeEEeCC-cHHHHh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK--PAAIVFGM-GYVTNS 175 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~s-Gs~a~~ 175 (488)
|..+++++-... .+. .++.+ +++.+++.+....++.+ .|. .+|++.+|++++. ++.+++++ +++++.
T Consensus 25 ~~~~~~~~~~e~-~~~-~~~~~-~~~~~~~~~~~~~Y~~~---~G~----~~lr~~ia~~~~~~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 25 ESCIDSLTLEEL-LAL-AGKNP-EAFYQELGQKKLTYGWI---EGS----PEFKEAVASLYQNVKPENILQTNGATGANF 94 (373)
T ss_pred cCCCCCCcHHHH-Hhc-cCcch-HHHHHHHhcCCccCCCC---CCC----HHHHHHHHHHhcCCChhhEEEcCChHHHHH
Confidence 455666552111 111 13455 88888887754444322 243 7999999998853 34455555 456778
Q ss_pred hhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC
Q 040324 176 SILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG 248 (488)
Q Consensus 176 ~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~ 248 (488)
.++.+++++||.|+++.|+|..+...++..|++++.++.+ |++++++.+.+ +++ +|++..
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~------------~~k-li~i~~ 161 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP------------NTK-LICINN 161 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC------------CCc-EEEEeC
Confidence 8888889999999999999999998899999999888753 56666655432 244 455567
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEe
Q 040324 249 IYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAG 322 (488)
Q Consensus 249 v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~ 322 (488)
..+++|.+.+ +++|+++|++||+++|+||+|. .+...+. ....... .+..|.++||||.+|.+| ||+++
T Consensus 162 p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~--~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~ 236 (373)
T PRK07324 162 ANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR--PLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAA 236 (373)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc--ccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEec
Confidence 7889998887 8999999999999999999998 5544332 1122222 223688899999999888 99999
Q ss_pred CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeE
Q 040324 323 SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVM 401 (488)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 401 (488)
++++++.+.......+.+ .+++...++..+|+.. ....++.++.++++.+.+.+.|++. ++.+..+.++..+
T Consensus 237 ~~~li~~~~~~~~~~~~~--~~~~~q~~a~~~l~~~-----~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~ 309 (373)
T PRK07324 237 NEEVIDILRKYRDYTMIC--AGVFDDMLASLALEHR-----DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTS 309 (373)
T ss_pred CHHHHHHHHHHhCcEEec--CChHHHHHHHHHHcCH-----HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEE
Confidence 999999988766533333 5566655555555421 1134566677788888888888876 6666666666666
Q ss_pred EEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 402 PIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
++.+..+....+++++|++ +||.+.|.. .+. ..+++||+++ .+++.+++++++|.+++++.
T Consensus 310 ~i~~~~~~~~~~~~~~ll~~~gv~v~pg~-~F~--~~~~iRis~~--~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 310 FVKLDVDMPSEDFCLKLLKETGVLLVPGN-RFD--LEGHVRIGYC--CDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred EEEeCCCCCHHHHHHHHHHhcCEEEECcc-ccC--CCCeEEEEec--CCHHHHHHHHHHHHHHHHhc
Confidence 7777655567789999875 599999732 111 2368999984 57999999999999988753
No 125
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.96 E-value=4.4e-27 Score=233.64 Aligned_cols=323 Identities=19% Similarity=0.131 Sum_probs=222.2
Q ss_pred EeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccC
Q 040324 104 NLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMG 183 (488)
Q Consensus 104 d~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~ 183 (488)
||+|++++|. +|.+.+++.+++.... .++..+...++++.+++++|.++.+++++|++++..++.++.+
T Consensus 1 ~~~~~~~~~~---~~~v~~a~~~~~~~~~--------~~~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~ 69 (338)
T cd06502 1 DFRSDTVTGP---TPEMLEAMAAANVGDD--------VYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQ 69 (338)
T ss_pred CcccccCCCC---CHHHHHHHHhcccCCc--------ccCCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcC
Confidence 6888888773 4778888877653221 2244567799999999999966789999999999888888899
Q ss_pred CCcEEEEeCCCchHHHH---HHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCC-
Q 040324 184 KGSLIISDSLNHNSIVN---GARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGE- 255 (488)
Q Consensus 184 ~~~~Vl~~~~~h~~~~~---~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~- 255 (488)
+|+.|+++.++|.+... .....|.+++.++.+ |++++++++.+... .+.+..+ +|+++++.+.+|.
T Consensus 70 ~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~-----~~~~~~~-~v~l~~p~n~g~~~ 143 (338)
T cd06502 70 PGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDD-----IHFPPPS-LVSLENTTEGGTVY 143 (338)
T ss_pred CCCeEEEecCcceeeecCCcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCC-----CcCCcce-EEEEEeecCCcccc
Confidence 99999999999987553 244578888888763 78888887764210 0112234 4555555555443
Q ss_pred -CCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCccc-EEEeCHHHHHHHHhh
Q 040324 256 -LCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGG-YIAGSKELIQYLKYN 333 (488)
Q Consensus 256 -~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg-~i~~~~~~~~~~~~~ 333 (488)
..++++|+++|++||+++|+||+|..+..+..|..... .. .+.|+++.|++|++|.+|| ++++++++++.+...
T Consensus 144 ~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~-~~---~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~ 219 (338)
T cd06502 144 PLDELKAISALAKENGLPLHLDGARLANAAAALGVALKT-YK---SGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRR 219 (338)
T ss_pred CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHH-HH---hcCCEEEEeccccCCCccceEEECCHHHHHHHHHH
Confidence 33588899999999999999999864433222322111 11 2347888999999997665 456788998888654
Q ss_pred CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC-cchHH
Q 040324 334 CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN-PAKVS 412 (488)
Q Consensus 334 ~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 412 (488)
...+.++.+.++..+++++++|+.- ...+..+++.++.+++.+.|+++|+.+. +..++++.+.... .....
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~L~~~-------~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~v~~~~~~~~~~ 291 (338)
T cd06502 220 RKQAGGGMRQSGFLAAAGLAALEND-------LWLRRLRHDHEMARRLAEALEELGGLES-EVQTNIVLLDPVEANAVFV 291 (338)
T ss_pred HHHhCCChhhHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHHHhcCCCcc-cccCCeEEEecCCccHHHH
Confidence 3222222235556666666665421 2345667888889999999999887544 3345666665532 22233
Q ss_pred HHHHHHH---HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 413 SFSRECL---KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 413 ~~~~~l~---~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.+.+.+. ++|+.+.+.+ .+++||++++.+|++|++++++++++
T Consensus 292 ~l~~~l~~~~~~gi~~~~~~-------~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 292 ELSKEAIERRGEGVLFYAWG-------EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHhhhCCEEEEecC-------CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 4555554 6799987532 26899999999999999999999865
No 126
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=5.9e-26 Score=229.68 Aligned_cols=331 Identities=20% Similarity=0.189 Sum_probs=229.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CC-eEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PA-AIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (488)
+..++||+.+++ .+. .+|.+.+++.+.+..... ..|+......+|++++|+++ |. ++ .+++++|
T Consensus 31 ~~~~i~l~~~~p-~~~-~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G 102 (389)
T PRK08068 31 GHDVINLGQGNP-DQP-TPEHIVEALQEAAENPAN------HKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFG 102 (389)
T ss_pred CCCeEEecCCCC-CCC-CCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 556799976654 222 245677777777654211 11122233478899999887 42 23 5666666
Q ss_pred HH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
+. +...++.+++++|+.|+++.|+|+.+...++..|++++.++.+ |++++++.+.+ ..++
T Consensus 103 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------------~~~~ 170 (389)
T PRK08068 103 GKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE------------KAKL 170 (389)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc------------cceE
Confidence 54 4566778888999999999999999999999999999988863 45566655532 1455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcC-CCCCCccEEEcccccccCCcc-
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLG-VDTSDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~-v~p~~~di~~~t~sK~~g~~G- 317 (488)
++++ ...+++|.+.+ +++|+++|++||+++|+||+|. .+...+........ .+.++..++++||||+||.+|
T Consensus 171 v~l~-~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~--~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl 247 (389)
T PRK08068 171 MYLN-YPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYG--AIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW 247 (389)
T ss_pred EEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhh--hhccCCCCCcChhhCCCccCCEEEEecchhccCCccc
Confidence 5555 44788998886 6788889999999999999998 44433321111111 112334688899999999888
Q ss_pred --cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 318 --GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 318 --g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
||+++++++++.+......+. .+.+++.+.++.+++.. ..++.++.+++++++.+.+.+.|++.|+.+..+
T Consensus 248 RiG~~~~~~~l~~~l~~~~~~~~--~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~~~ 320 (389)
T PRK08068 248 RVAFAVGNESVIEAINLLQDHLF--VSLFGAIQDAAIEALLS-----DQSCVAELVARYESRRNAFISACREIGWEVDAP 320 (389)
T ss_pred eeEeEecCHHHHHHHHHHHhhcc--CCCChHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCC
Confidence 999999999998876654322 23445555555555431 123567788899999999999999999877666
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.++.++++.+.......+++++|++ +||.+.+.. .+.+.+.+++||+++ .+++.+.+++++|.+
T Consensus 321 ~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~-~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 321 KGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGN-GFGEHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred CeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecch-HhCccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 6666678877655567789999997 599998732 112234579999994 567788888877764
No 127
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.7e-25 Score=223.88 Aligned_cols=315 Identities=21% Similarity=0.249 Sum_probs=224.0
Q ss_pred ccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--C-eEEeCCcHHHHhhhhhcccCCCcEEEEeCCC
Q 040324 118 EYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP--A-AIVFGMGYVTNSSILPVLMGKGSLIISDSLN 194 (488)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~-~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~ 194 (488)
+.+.+++.+++.+..... + .....+..+++++.+++++|.+ . .+++++|++++..++.++..+|+.|++..+.
T Consensus 8 ~~~~~~v~~a~~~~~~~~---~-~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~ 83 (356)
T cd06451 8 SNVPPRVLKAMNRPMLGH---R-SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNG 83 (356)
T ss_pred cCCCHHHHHHhCCCccCC---C-CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCC
Confidence 445566666665432211 1 1123455689999999999973 3 4567778999888888888999999999887
Q ss_pred chH--HHHHHHhcCCeEEEeeC-----CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHH
Q 040324 195 HNS--IVNGARGSGATIRVFQH-----NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICK 267 (488)
Q Consensus 195 h~~--~~~~~~~~g~~v~~~~~-----~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~ 267 (488)
|.+ +...++..|++++.++. .|++++++.+++. ..+ +|++..+.++.|.+.++++|.++|+
T Consensus 84 ~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~-----------~~~-~v~i~~~~~~~G~~~~~~~i~~~a~ 151 (356)
T cd06451 84 VFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQH-----------DIK-AVTLTHNETSTGVLNPLEGIGALAK 151 (356)
T ss_pred chhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhcc-----------CCC-EEEEeccCCCcccccCHHHHHHHHH
Confidence 776 34556778888888864 3788888877641 134 4444456778999999999999999
Q ss_pred HcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc-c-cEEEeCHHHHHHHHh--hCCCC------
Q 040324 268 RYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-G-GYIAGSKELIQYLKY--NCPAH------ 337 (488)
Q Consensus 268 ~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-G-g~i~~~~~~~~~~~~--~~~~~------ 337 (488)
++|+++++|++|++|... +.+...++|+++++++|+|+++ | |+++.+++.++.+.. ...++
T Consensus 152 ~~~~~li~D~~~~~g~~~---------~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (356)
T cd06451 152 KHDALLIVDAVSSLGGEP---------FRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLL 222 (356)
T ss_pred hcCCEEEEeeehhccCcc---------ccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHH
Confidence 999999999999854321 1222234588888999999864 4 999999998887753 11110
Q ss_pred ---------cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC--CC-eEEEEe
Q 040324 338 ---------LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND--SP-VMPIMV 405 (488)
Q Consensus 338 ---------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~--~~-~~~~~~ 405 (488)
..+.+.++...+++.++++.+.. ...+.+.++..++.+++++.|++.|+.+..++. ++ ++++.+
T Consensus 223 ~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 298 (356)
T cd06451 223 LLKYWGEGYSYPHTPPVNLLYALREALDLILE----EGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLV 298 (356)
T ss_pred HHhhhcccCCCCCCChHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEEC
Confidence 12223556666777788887642 134667888899999999999999987764322 22 334444
Q ss_pred CCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 406 YNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 406 ~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
.......++++.|.++ ||.+.+...+ ...+++|++++..+|+||+++++++|++++
T Consensus 299 ~~~~~~~~~~~~L~~~~gI~~~~g~~~---~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 299 PEGVDGDEVVRRLMKRYNIEIAGGLGP---TAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred CCCCCHHHHHHHHHHhCCEEEeccccc---ccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 4444677899999999 9999863221 223689999999999999999999998875
No 128
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=225.89 Aligned_cols=321 Identities=16% Similarity=0.129 Sum_probs=231.2
Q ss_pred eeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CCeEEeCCcHHH
Q 040324 101 RCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PAAIVFGMGYVT 173 (488)
Q Consensus 101 ~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sGs~a 173 (488)
..+|++.|.. .++ .+|.+.+++.+++....... ..|. .+...+|++.+|+++ |. ++.+++++|+..
T Consensus 27 ~~i~l~~~~~-~~~-~~~~~~~al~~~l~~~~~~~----~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~ 99 (368)
T PRK03317 27 VPVRLNTNEN-PYP-PSPALVADIAEAVAEAAAGL----NRYP-DRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNE 99 (368)
T ss_pred ceeEecCCCC-CCC-CCHHHHHHHHHHHhhhhhhh----ccCC-CCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHH
Confidence 4578764422 122 24678888888775421111 1111 122478999999998 32 356778887665
Q ss_pred H-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc
Q 040324 174 N-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE 247 (488)
Q Consensus 174 ~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e 247 (488)
. ..++.+++++|+.|+++.|+|..+...++..|.+++.++.+ |++++++.+.+. ..+++++ .
T Consensus 100 ~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~-----------~~~~i~l-~ 167 (368)
T PRK03317 100 ILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEH-----------RPDVVFL-T 167 (368)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhcc-----------CCCEEEE-e
Confidence 4 67788888999999999999999998888888888877632 678888877641 1344554 4
Q ss_pred CcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc---cEEEeC
Q 040324 248 GIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGS 323 (488)
Q Consensus 248 ~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~ 323 (488)
..++++|.+.+.+++.++|+.++++||+||+|+ .|++.|.. ..+..+..+ ..++++||||++|.+| ||++++
T Consensus 168 ~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~--~~~~~~~~~~~~~~~~~~--~~i~~~SfSK~~g~~GlRiG~~~~~ 243 (368)
T PRK03317 168 SPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA--EFRRSGTPSALTLLPEYP--RLVVSRTMSKAFAFAGGRLGYLAAA 243 (368)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch--hhcccCCcCHHHHHHhCC--CEEEEEechhhhccchhhhhhhhCC
Confidence 778999999999999999999999999999999 66555533 333333222 3578899999999888 999999
Q ss_pred HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEE
Q 040324 324 KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPI 403 (488)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 403 (488)
+++++.+..... .++ .+++.++++.++|+... ...+.++++.++.+.+.+.|++.|+.+..+.++.+++.
T Consensus 244 ~~~~~~l~~~~~--~~~--~s~~~~~a~~~~l~~~~------~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 313 (368)
T PRK03317 244 PAVVDALRLVRL--PYH--LSAVTQAAARAALRHAD------ELLASVAALRAERDRVVAWLRELGLRVAPSDANFVLFG 313 (368)
T ss_pred HHHHHHHHhcCC--CCC--CCHHHHHHHHHHhhCHH------HHHHHHHHHHHHHHHHHHHHHHCCCEeCCCCCcEEEEe
Confidence 999999876543 233 77888888777776431 33445667788888999999998988765544333222
Q ss_pred EeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 404 MVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.+ ....++.+.|+++||.+.+.+. .+++||++ .+.+++++++++|+++++.
T Consensus 314 ~~---~~~~~~~~~l~~~Gv~v~~~~~------~~~iRi~~---~~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 314 RF---ADRHAVWQGLLDRGVLIRDVGI------PGWLRVTI---GTPEENDAFLAALAEVLAT 364 (368)
T ss_pred cc---CCHHHHHHHHHHCCEEEEeCCC------CCeEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 22 2467899999999999985432 36899997 4789999999999998754
No 129
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.95 E-value=9.9e-26 Score=228.02 Aligned_cols=332 Identities=17% Similarity=0.146 Sum_probs=228.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CC-eEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PA-AIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (488)
|+.++||+.+.. .++ .++.+.+++.+.+..... ..++......+|++.+|+++ |. ++ .+++++|
T Consensus 29 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (388)
T PRK07366 29 GKELIDLSLGSS-DLP-APAHALEAIAQSLHDPST------HGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIG 100 (388)
T ss_pred CCCeEEeCCCCC-CCC-CCHHHHHHHHHHHhCccc------CCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCC
Confidence 677899875432 222 246677777776643211 11122233368899999887 32 23 5777777
Q ss_pred HHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
+.. ...++.+++.+||.|+++.|+|..+...++..|++++.++.+ |++++++.+.. ..++
T Consensus 101 s~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~k~ 168 (388)
T PRK07366 101 SQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA------------QARL 168 (388)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc------------cceE
Confidence 664 467778888999999999999999999999999999988754 33444443321 2455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCC-CccEEEcccccccCCcc
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTS-DVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~-~~di~~~t~sK~~g~~G 317 (488)
++++ +..+++|.+.+ +++|+++|++||++||+||+|....+ .+.. .......++. ++.|+++||||++|.+|
T Consensus 169 i~l~-~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 169 MVLS-YPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVF--DGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred EEEe-CCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhccc--CCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 5554 57889998775 77888899999999999999984333 2221 1222233322 34578899999999888
Q ss_pred ---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC
Q 040324 318 ---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG 394 (488)
Q Consensus 318 ---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 394 (488)
||+++++++++.+......+..+ ..+..+.++++++.. ..++.++.++.++++.+++.+.|++.|+.+..
T Consensus 246 lRiG~~v~~~~li~~l~~~~~~~~~~--~~~~~~~~a~~~l~~-----~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~ 318 (388)
T PRK07366 246 FRIGFAIGNAQLIQALRQVKAVVDFN--QYRGILNGAIAALTG-----PQATVQQTVQIFRQRRDAFINALHQIGWPVPL 318 (388)
T ss_pred hhheehcCCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 99999999999887655433332 334344555555531 12356778889999999999999998887666
Q ss_pred CCCCCeEEEEeCCc--chHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 395 DNDSPVMPIMVYNP--AKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 395 ~~~~~~~~~~~~~~--~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
+.++.++++.+... ....++++.|+ ++||.+.+.. .+...+.+++||+++ .+++++++++++|.++
T Consensus 319 p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~-~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 319 PEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGS-GFGKSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred CCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCch-HhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 66778888877543 23567888875 4599999732 112223478999984 5799999999999865
No 130
>PRK08912 hypothetical protein; Provisional
Probab=99.95 E-value=2.1e-25 Score=225.56 Aligned_cols=333 Identities=17% Similarity=0.211 Sum_probs=229.4
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C---CC-eEEeCCc-
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K---PA-AIVFGMG- 170 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~-~i~~~sG- 170 (488)
...+||+++.+ ..+ .++.+.+++.+.+......+ +......+|++.++++++ . ++ .+++++|
T Consensus 26 ~~~i~l~~g~p-~~~-~p~~~~~~~~~~~~~~~~~Y-------~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 96 (387)
T PRK08912 26 HGAINLGQGFP-DDP-GPEDVRRAAADALLDGSNQY-------PPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGA 96 (387)
T ss_pred CCeEEccCCCC-CCC-CCHHHHHHHHHHHhcCCCCC-------CCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCc
Confidence 34688874432 122 24566777666654321112 222223678888887763 2 23 4555555
Q ss_pred HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 171 YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
+++...++..+++++|.|+++.|+|+.+...++..|++++.++.+ |++++++.+.. ..++++
T Consensus 97 ~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~v~ 164 (387)
T PRK08912 97 TEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSP------------RTKAVL 164 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCc------------cceEEE
Confidence 556677788888999999999999999999999999998877653 56777776542 245555
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCC-CCCcchhcCCCCCCccEEEcccccccCCcc---
Q 040324 245 VVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKT-GRGVCELLGVDTSDVDIMMGTFSKSFGSYG--- 317 (488)
Q Consensus 245 i~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~-g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--- 317 (488)
++ ...+++|.+.+ +++|+++|++|++++|+||+|....++.. .....+..+. .+.+++++||||.+|.+|
T Consensus 165 l~-~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~GlRi 241 (387)
T PRK08912 165 LN-NPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGM--RERTVKIGSAGKIFSLTGWKV 241 (387)
T ss_pred Ee-CCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCc--cCceEEEeechhhccCcCcee
Confidence 55 66888998776 77899999999999999999984333211 1112222222 245799999999999888
Q ss_pred cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC
Q 040324 318 GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND 397 (488)
Q Consensus 318 g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 397 (488)
||+++++++++.+........++ .++....++.+.|.. ..+..++.+++++++.+++.+.|+..|+.+..+.+
T Consensus 242 G~~~~~~~~~~~l~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g 314 (387)
T PRK08912 242 GFVCAAPPLLRVLAKAHQFLTFT--TPPNLQAAVAYGLGK-----PDDYFEGMRADLARSRDRLAAGLRRIGFPVLPSQG 314 (387)
T ss_pred EEEecCHHHHHHHHHHHhhcccc--CChHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc
Confidence 99999999999887654433333 455555555555531 12245678888999999999999999988777666
Q ss_pred CCeEEEEeCC---cchHHHHHHHHHH-CCceEEeec-CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 398 SPVMPIMVYN---PAKVSSFSRECLK-QNVAIVTVG-FPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 398 ~~~~~~~~~~---~~~~~~~~~~l~~-~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+.++++.+.. .....++++.|++ +||.+.+.. |.......+++||+++ .+++++++++++|.++++
T Consensus 315 ~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 315 TYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARR 385 (387)
T ss_pred ceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence 7777777754 2456789999875 599999732 2222233579999995 468999999999988765
No 131
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-25 Score=227.01 Aligned_cols=331 Identities=17% Similarity=0.146 Sum_probs=227.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C---C-CeEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K---P-AAIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~-~~i~~~sG 170 (488)
|..++||++++. .+. .++.+.+++.+.+..... ..++......+|++.++++++ . + +.+++++|
T Consensus 30 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G 101 (385)
T PRK09276 30 GVDVISLGIGDP-DLP-TPDHIIEAMCKAVEDPEN------HQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIG 101 (385)
T ss_pred CCCEEEecCCCC-CCC-CCHHHHHHHHHHHhCCCC------CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence 566788875432 122 235667777766654211 111222223688888888873 2 2 34777777
Q ss_pred HH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
+. +...++..++++||.|+++.|+|+.+...++..|.+++.++.+ |++++++.+.. ..++
T Consensus 102 ~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~------------~~~~ 169 (385)
T PRK09276 102 SKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK------------KAKL 169 (385)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc------------cceE
Confidence 65 4567778888999999999999999998899999999888753 35555554432 2455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcc-
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~G- 317 (488)
++++ +..+++|.+.+ +++|+++|++||+++|+||+|....+ .+........++. .+..|.++||||.||.+|
T Consensus 170 v~l~-~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 246 (385)
T PRK09276 170 MFIN-YPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAY--DGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW 246 (385)
T ss_pred EEEe-CCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheec--CCCCCCChhccCCCcCCEEEEecchhhcCCcch
Confidence 5555 55888998886 68999999999999999999984333 2222222222222 245688899999999888
Q ss_pred --cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 318 --GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 318 --g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
||+++++++++.+........ .+.+++...++.+.|+. ...+.++.+++++++.+++.+.|++.|+++..+
T Consensus 247 RiG~~i~~~~l~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 319 (385)
T PRK09276 247 RIGFAVGNADLIAGLGKVKSNVD--SGVFQAIQEAGIAALNG-----PQEVVEELRKIYQERRDILVEGLRKLGLEVEPP 319 (385)
T ss_pred hheeeeCCHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHcC-----cHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 999999999998876543222 22455555555555532 123557778888999999999999998887766
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.++.++++.+....+..+++++|++ +||.+.+... +...+.+++||+++ .+++++.+++++|.+
T Consensus 320 ~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~-f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 320 KATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNG-FGEYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred CcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchh-hCCCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 6666678877655567789999875 6999997321 12233479999984 578888888888753
No 132
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2.6e-25 Score=223.14 Aligned_cols=326 Identities=15% Similarity=0.174 Sum_probs=232.3
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hhh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SSI 177 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~~ 177 (488)
+.+++|+.|.. +++. ++.+.+++.+.+... ..+ +.. ...+|++++|++++.+ +.+++++|+..+ ..+
T Consensus 32 ~~~~~l~~~~~-~~~~-~~~~~~a~~~~~~~~-~~Y-------~~~-~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~ 100 (369)
T PRK08153 32 PFRARIGANES-GFGP-SPSVIAAMREAAAEI-WKY-------GDP-ENHDLRHALAAHHGVAPENIMVGEGIDGLLGLI 100 (369)
T ss_pred cceeEecCCCC-CCCC-CHHHHHHHHHHHHHh-hcC-------CCC-ccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHH
Confidence 34578875532 4443 477888888776542 122 111 1479999999999864 688889988876 456
Q ss_pred hhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC-CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 178 LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH-NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 178 ~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~-~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
+..++++||.|+++.|+|+.+...+...|++++.++. +|..++++.++.... +..++++++ ...+++|.+
T Consensus 101 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~--------~~~~~i~l~-~P~NPtG~~ 171 (369)
T PRK08153 101 VRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDREDLDALLDAARR--------ENAPLVYLA-NPDNPMGSW 171 (369)
T ss_pred HHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcc--------cCCcEEEEe-CCCCCCCCC
Confidence 6677899999999999999998888888999988885 333344443332211 124555555 457778999
Q ss_pred CChHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHH
Q 040324 257 CKLPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLK 331 (488)
Q Consensus 257 ~~l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~ 331 (488)
.+.+++.++++.+ +++||+||+|+ .++..+.. ...... .+..++++||||++|.+| ||+++++++++.+.
T Consensus 172 ~~~~~l~~l~~~~~~~~~lI~DE~y~--~~~~~~~~-~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~ 246 (369)
T PRK08153 172 HPAADIVAFIEALPETTLLVLDEAYC--ETAPAGAA-PPIDTD--DPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFD 246 (369)
T ss_pred CCHHHHHHHHHhCCCCcEEEEeCchh--hhcCcccc-hhhhhc--CCCEEEEecchHhccCcchheeeeecCHHHHHHHH
Confidence 9877777777654 89999999998 56544321 111111 224688999999999888 99999999999887
Q ss_pred hhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC-cch
Q 040324 332 YNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN-PAK 410 (488)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~-~~~ 410 (488)
..... ++ .+++.++++.++|+. .+..++.++.++++.+++.+.|++.|+.+. +.+++++++.+.. ...
T Consensus 247 ~~~~~--~~--~s~~~q~~~~~~l~~------~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-p~~~~f~~~~~~~~~~~ 315 (369)
T PRK08153 247 KVRNH--FG--MNRIAQAAALAALKD------QAYLAEVVGKIAAARDRIAAIARANGLTPL-PSATNFVAIDCGRDGAF 315 (369)
T ss_pred HhhcC--CC--CCHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHHHHHHCCCccC-CCcCcEEEEECCCCccc
Confidence 65542 33 778888888777741 124566788888899999999998887654 4567777776642 245
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
..++.++|+++||.+.. |..+.+.+++|+++. +++|+++++++|++++...
T Consensus 316 a~~l~~~l~~~Gi~v~~---p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 316 ARAVLDGLIARDIFVRM---PGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAA 366 (369)
T ss_pred HHHHHHHHHHCCeEEee---CCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 67899999999999963 222223468999983 7999999999999988754
No 133
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.7e-25 Score=226.77 Aligned_cols=333 Identities=20% Similarity=0.179 Sum_probs=231.8
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C----CCeEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K----PAAIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~----~~~i~~~sG 170 (488)
+.+.+||+.+++ .++ .++.+.+++.+.+......+ +......+|++.+|++++ . ++.++++++
T Consensus 30 ~~~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~ 100 (393)
T PRK05764 30 GRDVISLGAGEP-DFD-TPEHIKEAAIEALDDGKTKY-------TPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGA 100 (393)
T ss_pred cCCEEEeCCCCC-CCC-CCHHHHHHHHHHHhcCCCCc-------CCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCc
Confidence 456788875443 222 24667777777765432222 223334788888888873 2 234444445
Q ss_pred HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 171 YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
++++..++.+++.+++.|+++.|+|..+...++..|.+++.++.+ |++++++.+++ ..+++
T Consensus 101 ~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~------------~~~~v 168 (393)
T PRK05764 101 KQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITP------------KTKAL 168 (393)
T ss_pred HHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCc------------cceEE
Confidence 567777888888999999999999999998899999999988864 46777776642 24444
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCC-CCCcchhcCCCCCCccEEEcccccccCCcc--
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKT-GRGVCELLGVDTSDVDIMMGTFSKSFGSYG-- 317 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~-g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-- 317 (488)
++ ....+++|.+.+ +++|+++|++||+++|+||+|....++.. .....+. ..+..+.+++++||||.+|.+|
T Consensus 169 ~~-~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~G~R 246 (393)
T PRK05764 169 IL-NSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASL-SPELRDRTITVNGFSKAYAMTGWR 246 (393)
T ss_pred EE-ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHc-CCCCcCCEEEEecCcccccCccce
Confidence 44 455778888765 88999999999999999999984433211 1112221 1122345889999999999777
Q ss_pred -cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC
Q 040324 318 -GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD 395 (488)
Q Consensus 318 -g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 395 (488)
||+++++++++.+........ ...+++.+.++.+.|+. ..+..++.+++++++.+.+++.|++. |+.+..+
T Consensus 247 iG~i~~~~~~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 319 (393)
T PRK05764 247 LGYAAGPKELIKAMSKLQSHST--SNPTSIAQYAAVAALNG-----PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP 319 (393)
T ss_pred eEEEecCHHHHHHHHHHHhhcc--cCCChHHHHHHHHHHcC-----ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 999999999998876544322 23667766666666541 12355677888899999999999998 8887766
Q ss_pred CCCCeEEEEeCCcc-----hHHHHHHHHHH-CCceEEeec-CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 396 NDSPVMPIMVYNPA-----KVSSFSRECLK-QNVAIVTVG-FPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 396 ~~~~~~~~~~~~~~-----~~~~~~~~l~~-~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.++.++++.+.... ...++.+.|++ +||.+.+.. |+. .+++||++ .++++++++++++|.++++++
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~----~~~vRis~--~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 320 EGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA----PGYVRLSY--ATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred CcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC----CCEEEEEe--cCCHHHHHHHHHHHHHHHHhh
Confidence 66666666664432 13688888875 599998632 221 47999987 468999999999999988754
No 134
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=1.5e-25 Score=211.31 Aligned_cols=318 Identities=19% Similarity=0.159 Sum_probs=243.0
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCCcHH-HHhhhhhcccCCCcEE
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGMGYV-TNSSILPVLMGKGSLI 188 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sGs~-a~~~~~~~~~~~~~~V 188 (488)
+|.+.+|+.+.++..-.+|+ ++. +++-+.+++|... ++.++++.|-- ++..++++++.+||.|
T Consensus 40 pp~i~~Al~~rvdhGvfGY~-----~~~----~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~V 110 (388)
T COG1168 40 PPEIIEALRERVDHGVFGYP-----YGS----DELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGV 110 (388)
T ss_pred CHHHHHHHHHHHhcCCCCCC-----CCC----HHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCee
Confidence 58899999998877433442 123 5566677766642 35666666655 4588999999999999
Q ss_pred EEeCCCchHHHHHHHhcCCeEEEeeCC--------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC---
Q 040324 189 ISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC--- 257 (488)
Q Consensus 189 l~~~~~h~~~~~~~~~~g~~v~~~~~~--------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~--- 257 (488)
++..|.|+.+.......|.++...|.. |.++||+.+.+. ++.++|....++++|.+-
T Consensus 111 vi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~------------~vkl~iLCnPHNP~Grvwt~e 178 (388)
T COG1168 111 VIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDE------------RVKLFILCNPHNPTGRVWTKE 178 (388)
T ss_pred EecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcC------------CccEEEEeCCCCCCCccccHH
Confidence 999999999999999999998887643 899999999862 444666677778888665
Q ss_pred ChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC--CCccEEEcccccccCCcc---cE-EEeCHHHHHHH-
Q 040324 258 KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT--SDVDIMMGTFSKSFGSYG---GY-IAGSKELIQYL- 330 (488)
Q Consensus 258 ~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p--~~~di~~~t~sK~~g~~G---g~-i~~~~~~~~~~- 330 (488)
.|.+|.+||++||+.+|.||+|+. +-..|........+++ .+..|.+.+-||+|+.+| ++ |+.++++.+++
T Consensus 179 eL~~i~elc~kh~v~VISDEIHaD--lv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~ 256 (388)
T COG1168 179 ELRKIAELCLRHGVRVISDEIHAD--LVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFL 256 (388)
T ss_pred HHHHHHHHHHHcCCEEEeeccccc--ccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHH
Confidence 599999999999999999999994 4444533222233433 355677788899999887 44 55667764433
Q ss_pred HhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCCCCCCeEEEEeCCc
Q 040324 331 KYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGDNDSPVMPIMVYNP 408 (488)
Q Consensus 331 ~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~ 408 (488)
+........ ..|.....|..++.+. +.++.+++++.++.|.+++.+.|++. ++.+..+++++..|+.+..-
T Consensus 257 ~~l~~~~~~--~~n~lg~~A~~aAY~~-----G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l 329 (388)
T COG1168 257 KRLKRNGLH--GPSALGIIATEAAYNQ-----GEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCREL 329 (388)
T ss_pred HHHHHhcCC--CCchHHHHHHHHHHHh-----chHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeecccc
Confidence 333322222 3777888888888775 66789999999999999999999987 89999999999999988644
Q ss_pred ch-HHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 409 AK-VSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 409 ~~-~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.. ..++.+.|+++ +|.+.+ |+.+++.+.+++|+.+ +.+++-+++++++|..+++..
T Consensus 330 ~l~d~~l~~~ll~~akVal~~-G~~FG~~g~gf~RlN~--acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 330 GLDDSELAEFLLEEAKVALSP-GSTFGEEGSGFVRLNF--ACPRAILEEALERLKRALKKR 387 (388)
T ss_pred CCChHHHHHHHHHhhcEeccC-CCccCcCCCceEEEec--CCCHHHHHHHHHHHHHHHhcc
Confidence 33 35888889998 888885 6677888889999987 889999999999999887653
No 135
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.9e-25 Score=226.18 Aligned_cols=331 Identities=18% Similarity=0.178 Sum_probs=222.9
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CC-eEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PA-AIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (488)
|+.++||+.+++... .++.+.+++.+.+..... ..|+......+|++.+|+++ +. ++ .+++++|
T Consensus 34 g~~~i~l~~g~p~~~--~p~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G 105 (394)
T PRK05942 34 GLDLIDLGMGNPDGA--APQPVIEAAIAALADPQN------HGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLG 105 (394)
T ss_pred CCCeEEcCCCCCCCC--CCHHHHHHHHHHHhCCCC------ccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccC
Confidence 566889875443221 234466666666543110 11222233468888888887 32 23 4666666
Q ss_pred HH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
+. +...++.+++.+||.|+++.|+|+.+...+...|.+++.++.+ |++++++.+.+ ..++
T Consensus 106 ~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~k~ 173 (394)
T PRK05942 106 SKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ------------QAKI 173 (394)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc------------cceE
Confidence 55 4567777888999999999999999988888889998888642 56777766542 2455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcc-
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~G- 317 (488)
++++ ...+++|.+.+ +++|.++|++||+++|+||+|....+ .+........+.. .+..|.++||||.||.+|
T Consensus 174 i~l~-~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl 250 (394)
T PRK05942 174 LYFN-YPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAF--DGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW 250 (394)
T ss_pred EEEc-CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhcc--CCCCCCChhhCCCccccEEEEecchhccCChhh
Confidence 5555 55889998887 88999999999999999999984333 2221111222221 234677899999999888
Q ss_pred --cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 318 --GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 318 --g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
||+++++++++.++.......++ .+.+...++.++|+.. .+..++.+++++++.+++.+.|++.|+.+..+
T Consensus 251 RiG~i~~~~~l~~~l~~~~~~~~~~--~~~~~q~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 323 (394)
T PRK05942 251 RVGFVVGNRHIIQGLRTLKTNLDYG--IFSALQKAAETALQLP-----DSYLQQVQERYRTRRDFLIQGLGELGWNIPPT 323 (394)
T ss_pred heeeeecCHHHHHHHHHHHhhcccC--CCHHHHHHHHHHHhCc-----HHHHHHHHHHHHHHHHHHHHHHHHCCCeecCC
Confidence 99999999999888654422233 5555555555666432 22456778888999999999999888877766
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYNPAKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.++.++++.+.......++..+++ ++||.+.+.. .+...+.+++|++++ .+.+.+.+++++|.+
T Consensus 324 ~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~-~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 324 KATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGN-AFGEGGEGYVRISLI--ADCDRLGEALDRLKQ 388 (394)
T ss_pred CeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCCh-hhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 555677777765445567777665 5699998732 222234579999994 445666666665543
No 136
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.95 E-value=2.8e-25 Score=224.35 Aligned_cols=331 Identities=15% Similarity=0.116 Sum_probs=229.4
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C----CCeEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K----PAAIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~----~~~i~~~sG 170 (488)
|+.++||++++. .++ .++.+.+++.+.+..... ..++......+|++.+|++++ . ++.+++++|
T Consensus 28 ~~~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G 99 (383)
T TIGR03540 28 GVDVISLGIGDP-DLP-TPKHIVEALCKAAENPEN------HRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIG 99 (383)
T ss_pred CCCeEEeCCCCC-CCC-CCHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCC
Confidence 567788875543 233 245677777776653210 111222223678888888764 2 235667666
Q ss_pred HH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
+. +...++..++++||.|+++.|+|+.+...++..|.++..++.+ |++++++.+.+ ..++
T Consensus 100 ~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~------------~~~~ 167 (383)
T TIGR03540 100 SKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK------------KAKL 167 (383)
T ss_pred cHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc------------cceE
Confidence 55 5577778889999999999999999999899999999888753 45666665532 2455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcc-
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~G- 317 (488)
++++ ...+++|...+ +++|+++|++||++||+||+|....+ .+........++. .+..+.++||||.||.+|
T Consensus 168 v~i~-~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl 244 (383)
T TIGR03540 168 MFIN-YPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITF--DGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW 244 (383)
T ss_pred EEEe-CCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhcc--CCCCCcCcccCCCcccCEEEEEecccccCCccc
Confidence 5555 55889998887 78999999999999999999984333 2322222222221 234688899999999888
Q ss_pred --cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 318 --GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 318 --g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
||+++++++++.+......... +.+.+...++.++|+. ..++.+++++.++++.+.+.+.|++.|+.+..+
T Consensus 245 RiG~~i~~~~l~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 317 (383)
T TIGR03540 245 RIGMAVGNADLIAGLGKVKTNVDS--GVFQAIQYAAIAALNG-----PQDVVKEIRKIYQRRRDLLLEALKKIGIDVEKP 317 (383)
T ss_pred eeeEEeCCHHHHHHHHHHHHhccc--CCChHHHHHHHHHHhC-----CHHHHHHHHHHHHHHHHHHHHHHHhCCCEecCC
Confidence 9999999999888765432222 2445555555555532 123567778889999999999999999888777
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYNPAKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.++.++++.+.......+++++|+ ++||.+.+... +...+.+++||+++ .+++++++++++|.+
T Consensus 318 ~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~-f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 318 KATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVG-FGEYGEGYIRISLT--VPDERLEEAVARIKK 382 (383)
T ss_pred CcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchh-hCccCCCeEEEEec--CCHHHHHHHHHHHhh
Confidence 667777888765556778999986 46999997321 12223478999984 678888888888754
No 137
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=2e-25 Score=226.15 Aligned_cols=340 Identities=17% Similarity=0.182 Sum_probs=235.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C---CC-eEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K---PA-AIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~-~i~~~sG 170 (488)
|++++||+++++... .++.+.+++.+.+... .. ..|+......+|++.++++++ . ++ .+++++|
T Consensus 28 ~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~-~~-----~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G 99 (395)
T PRK08175 28 GEDIIDFSMGNPDGP--TPPHIVEKLCEVAQRP-DT-----HGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIG 99 (395)
T ss_pred CCCeEEcCCCCCCCC--CCHHHHHHHHHHHhCC-Cc-----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccC
Confidence 577899875543322 2345667766665431 11 112222334788888888763 2 23 5778888
Q ss_pred HHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEE
Q 040324 171 YVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVV 245 (488)
Q Consensus 171 s~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi 245 (488)
+... ..++..++.+|+.|+++.|+|+.+...++..|.++..++.+ +.+++++++++. .+..+++++
T Consensus 100 ~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~---------~~~~~~v~i 170 (395)
T PRK08175 100 SKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRES---------YPKPKMMIL 170 (395)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhc---------cCCceEEEE
Confidence 7654 56677888999999999999999888888899998888754 467777776541 112444444
Q ss_pred EcCcCCCCCCCCCh---HHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcc---c
Q 040324 246 VEGIYSMEGELCKL---PEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 246 ~e~v~s~~G~~~~l---~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~G---g 318 (488)
....+++|.+.+. ++|.++|++||+++|+||+|....+ .+........++. .+..+.+.||||.||.+| |
T Consensus 171 -~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG 247 (395)
T PRK08175 171 -GFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY--DGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIG 247 (395)
T ss_pred -eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhcc--CCCCCcchhcCCCcccCEEEEeeccccccCcchhhe
Confidence 4668899988875 8999999999999999999984333 2322222222221 234577899999999888 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+.........+ .+.+.+.++.+.|+. ..++.+.+++.++++.+++.+.|++.|+.+..+.++
T Consensus 248 ~~~~~~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g 320 (395)
T PRK08175 248 FMVGNPELVSALARIKSYHDYG--TFTPLQVAAIAALEG-----DQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKAS 320 (395)
T ss_pred eeeCCHHHHHHHHHHHhhcccC--CCcHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEE
Confidence 9999999999887654322232 444455555555532 122466778888999999999999998877666678
Q ss_pred CeEEEEeCCcc---hHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 399 PVMPIMVYNPA---KVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 399 ~~~~~~~~~~~---~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.++++.+.... ...+++++|++ +||.+.+.. .+.+.+.+++||++. .+++.+.+++++|.+++++.+
T Consensus 321 ~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~-~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l~~~~ 391 (395)
T PRK08175 321 MYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGI-GFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMFRADG 391 (395)
T ss_pred EEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCch-hhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHhcC
Confidence 88888886542 35788888775 699999732 112334578999884 689999999999999988665
No 138
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=2.9e-25 Score=222.46 Aligned_cols=320 Identities=18% Similarity=0.235 Sum_probs=224.4
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCC-----CChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEe
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDG-----GTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISD 191 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~-----g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~ 191 (488)
+..+.+++.+++.+|+.+++.++... ...+...++++.+|+++|.+.++++++|++++..++.++.++++.|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~ 89 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVD 89 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Confidence 46788899999999997766654422 2235678999999999999777777777778888888889999999999
Q ss_pred CCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHH
Q 040324 192 SLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIIT 264 (488)
Q Consensus 192 ~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~ 264 (488)
.+.|.+....++..|++++.++.+ |++++++.+++...+. .+ +..+|++....++.|.+.++++|.+
T Consensus 90 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~-----~~-~~~lv~l~~p~n~tG~~~~~~~i~~ 163 (361)
T cd06452 90 GLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEF-----GK-PPALALLTHVDGNYGNLHDAKKIAK 163 (361)
T ss_pred CCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhcc-----CC-CceEEEEECCCCCCeeeccHHHHHH
Confidence 999999888888889999888643 6788888886432110 01 2335555677788899999999999
Q ss_pred HHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCc----
Q 040324 265 ICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHL---- 338 (488)
Q Consensus 265 l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~---- 338 (488)
+|+++|+++|+||+|+.|.+...+. ..++|+++.|++|++++++ |++++++++++.+......+.
T Consensus 164 ~~~~~~~~vivD~a~~~g~~~~~~~---------~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~ 234 (361)
T cd06452 164 VCHEYGVPLLLNGAYTVGRMPVSGK---------ELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEV 234 (361)
T ss_pred HHHHcCCeEEEECCcccCCcCCCHH---------HcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcccccccccee
Confidence 9999999999999998654332111 1235899999999997543 999999999988865443210
Q ss_pred --ccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecC--CCCCCeEEEEeCC------
Q 040324 339 --YATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLG--DNDSPVMPIMVYN------ 407 (488)
Q Consensus 339 --~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~------ 407 (488)
.+.+.++..+++++++++.+.+ .. +...+..++.+++++.|+++ |+++.. +..++++.+....
T Consensus 235 ~~~~~~~~~~~~~~~~~al~~~~~-----~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~ 308 (361)
T cd06452 235 ELLGCTLRGAPLVTLMASFPHVKE-----RV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAK 308 (361)
T ss_pred eeeccccCchHHHHHHHHHHHHHH-----HH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhh
Confidence 1112222334445566654321 22 23334445668999999998 888763 2234555544431
Q ss_pred --cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 408 --PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 408 --~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
.....++.+.|+++||.+.. +. ....+|++. ..+|+||++.++++|+++.
T Consensus 309 ~~~~~~~~~~~~L~~~gI~~~~---~~---~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 309 KHKRRGYFLYSELKKRGIHGIK---PG---LTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hccccchhHHHHHHHcCceEEc---CC---CceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 11123699999999998542 11 135789887 3479999999999998754
No 139
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5e-25 Score=223.37 Aligned_cols=334 Identities=13% Similarity=0.127 Sum_probs=233.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCC-CCCCcccCCCChhhHHHHHHHHHHHh----CCC----C-eEEeC
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSH-STCSSRVDGGTLALHNELEECVARFV----GKP----A-AIVFG 168 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~----g~~----~-~i~~~ 168 (488)
|++++||+++.. .+. .++.+.+++.+.+..... .+ . .....+|++.+|+++ |.+ + .++++
T Consensus 43 ~~~~i~L~~g~p-~~~-~~~~~~~~l~~~~~~~~~~~Y-------~-~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it 112 (410)
T PRK06290 43 DMELIDMGVGEP-DEM-ADESVVEVLCEEAKKPENRGY-------A-DNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHS 112 (410)
T ss_pred CCCeEEcCCCCC-CCC-CCHHHHHHHHHHHhCCCCCCC-------C-CCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEc
Confidence 667889875432 222 235566666665533111 11 1 122368888888885 322 3 68888
Q ss_pred CcHHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 169 MGYVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 169 sGs~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+|+... ..++.+++++||.|+++.|+|+.+...++..|+++..++.+ |++++++.+.+ ..
T Consensus 113 ~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~------------~~ 180 (410)
T PRK06290 113 IGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE------------KA 180 (410)
T ss_pred cCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc------------cc
Confidence 888765 66778888999999999999999999999999999988753 56666665542 24
Q ss_pred eEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc
Q 040324 241 KIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
++++++ ...+++|.+.+ +++|+++|++||++||+||+|....++.......+..+ ..+.+|+++||||.+|.+|
T Consensus 181 k~i~l~-nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~--~~~~~I~i~SfSK~~g~~G 257 (410)
T PRK06290 181 KLLYLN-YPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPG--AKEVGVEIHSLSKAYNMTG 257 (410)
T ss_pred eEEEEE-CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCC--ccccEEEEeechhhcCCch
Confidence 556655 45889998887 78889999999999999999984433221111222211 1345799999999999888
Q ss_pred ---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC
Q 040324 318 ---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG 394 (488)
Q Consensus 318 ---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 394 (488)
||+++++++++.+......+..+ .+.+.+.++.++|+. .+..++.+++++++.+++.+.|++.|+.+..
T Consensus 258 lRiG~ii~~~~l~~~l~~~~~~~~~~--~~~~~q~aa~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 329 (410)
T PRK06290 258 WRLAFVVGNELIVKAFATVKDNNDSG--QFIAIQKAGIYALDH------PEITEKIREKYSRRLDKLVKILNEVGFKAEM 329 (410)
T ss_pred hheEeEEeCHHHHHHHHHHHhccccC--CcHHHHHHHHHHhhC------cHHHHHHHHHHHHHHHHHHHHHHhCCCeecC
Confidence 99999999999887655432222 334455555555542 1245678888999999999999999988776
Q ss_pred CCCCCeEEEEeCCc-------chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeec-CCCCHHHHHHHHHHHHHHHHH
Q 040324 395 DNDSPVMPIMVYNP-------AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICIS-ASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 395 ~~~~~~~~~~~~~~-------~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~-~~~t~edid~~l~~l~~~~~~ 466 (488)
+.++.++|+.+... ....+++++|+++|+++.. |.... .+++||++. ...++|+.++++++|++.+.+
T Consensus 330 p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~---p~~~~-~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 330 PGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTV---PWDDA-GHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred CCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEE---CCccc-cCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 66676777776542 2567899999999654442 21111 268999984 336889999999999999987
Q ss_pred hCC
Q 040324 467 VGI 469 (488)
Q Consensus 467 ~~~ 469 (488)
+..
T Consensus 406 ~~~ 408 (410)
T PRK06290 406 VEF 408 (410)
T ss_pred ccc
Confidence 753
No 140
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=3.6e-25 Score=224.78 Aligned_cols=337 Identities=17% Similarity=0.176 Sum_probs=231.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC--ChhhHHHHHHHHHHHhCCC--CeEEeC-CcHHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG--TLALHNELEECVARFVGKP--AAIVFG-MGYVT 173 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~-sGs~a 173 (488)
+.-|+|-++ .+..++.+.+++.+.++........+....+ .....+++++.+|+++|.+ +.++++ +++++
T Consensus 16 ~~iyld~a~-----~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~ 90 (398)
T TIGR03392 16 GTVYLDSAA-----TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTES 90 (398)
T ss_pred CeEEeeCcc-----ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHH
Confidence 356777653 2233567888888877653221111110001 1234578999999999973 445544 55556
Q ss_pred Hhhhhhcc----cCCCcEEEEeCCCchHHH----HHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 174 NSSILPVL----MGKGSLIISDSLNHNSIV----NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 174 ~~~~~~~~----~~~~~~Vl~~~~~h~~~~----~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+..++.++ .++|+.|++..+.|++.. ..++..|++++.++.+ |++++++.+.+ +
T Consensus 91 l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-------------~ 157 (398)
T TIGR03392 91 INLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP-------------R 157 (398)
T ss_pred HHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhcc-------------C
Confidence 66666655 478999999999998743 2346678998888753 67788777653 3
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GY 319 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~ 319 (488)
+.+|++..+.+++|.+.|+++|.++|+++|+++++|++|+.+.+. .++...++|+++.|++|.+|..| |+
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~ 228 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGP---------PDVQALDIDFYAFSGHKLYGPTGIGV 228 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCC---------CChhhcCCCEEEEecccccCCCceEE
Confidence 346667789999999999999999999999999999999854332 11222345888888889888777 99
Q ss_pred EEeCHHHHHHHHhhCCC------------------Ccc-cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHH
Q 040324 320 IAGSKELIQYLKYNCPA------------------HLY-ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNF 380 (488)
Q Consensus 320 i~~~~~~~~~~~~~~~~------------------~~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (488)
++.++++++.+.....+ ..+ ..+.+....+++.++++.+... ..++..++..+..++
T Consensus 229 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~----g~~~i~~~~~~l~~~ 304 (398)
T TIGR03392 229 LYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDI----DIAAAEAWSVSLADL 304 (398)
T ss_pred EEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Confidence 99999887766432110 001 1134555666777788876421 345677888889999
Q ss_pred HHHHHHhC-CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCcc-----CCCCeEEEeecCCCCHHHHH
Q 040324 381 FRSKLQKM-GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATP-----LLLARARICISASHTKEDLI 454 (488)
Q Consensus 381 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-----~~~~~iRi~~~~~~t~edid 454 (488)
+++.|+++ |+.+.....++++.+.+. .....++.+.|.++||.+........+ ...+.+|++++..+|++|+|
T Consensus 305 l~~~l~~l~g~~~~~~~~~~i~~~~~~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~ 383 (398)
T TIGR03392 305 AEERLAQLPGFRSFRCPGSSLLAFDFA-GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVD 383 (398)
T ss_pred HHHHHhcCCCeEEeCCCCCcEEEEEeC-CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHH
Confidence 99999887 777765555666665553 234568888899899999853221110 11368999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 040324 455 EALEVISRIGDLV 467 (488)
Q Consensus 455 ~~l~~l~~~~~~~ 467 (488)
+++++|+++++.+
T Consensus 384 ~l~~~l~~~~~~~ 396 (398)
T TIGR03392 384 ALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 141
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=3.5e-25 Score=223.45 Aligned_cols=333 Identities=16% Similarity=0.177 Sum_probs=221.3
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-----CeEEeCCcHHHH
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-----AAIVFGMGYVTN 174 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-----~~i~~~sGs~a~ 174 (488)
..+|||+.+.. .++ .++.+.+++.+.+.+....++ ...|..+..+.+++.+++++|.+ +++++++|+++.
T Consensus 29 ~~~i~l~~g~p-~~~-~~~~~~~~~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 29 HDALNLSQGAP-NFA-PDPALVEGVARAMRDGHNQYA---PMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred CCeEEcCCCCC-CCC-CCHHHHHHHHHHHHhCCCCcC---CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 45788875432 232 246677777776654212221 12244444455555555555752 355555555666
Q ss_pred hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC
Q 040324 175 SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG 248 (488)
Q Consensus 175 ~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~ 248 (488)
..++.+++.+||.|+++.|+|..+...++..|.+++.++.+ |+++|++.++. ..+++++ ..
T Consensus 104 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~------------~~~~v~i-~~ 170 (384)
T PRK12414 104 YAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITP------------RTRMIIV-NT 170 (384)
T ss_pred HHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCc------------ccEEEEE-cC
Confidence 77888889999999999999999988888899998888753 56777666542 2455544 46
Q ss_pred cCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCCC-CCCcchhcCCCCCCccEEEcccccccCCcc---cEEE
Q 040324 249 IYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGKT-GRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIA 321 (488)
Q Consensus 249 v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~~-g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~ 321 (488)
..+++|.+. ++++|+++|++||+++|+||+|....+... ......+.+. .+..|+++||||.+|.+| ||++
T Consensus 171 p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~~~pGlRiG~~v 248 (384)
T PRK12414 171 PHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHREL--AERSVIVSSFGKSYHVTGWRVGYCL 248 (384)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCc--cCcEEEEecccccccCccceEEEEe
Confidence 788889875 488899999999999999999984444211 1111111111 234688999999999888 9999
Q ss_pred eCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeE
Q 040324 322 GSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVM 401 (488)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 401 (488)
+++++++.+........++ .+.+.+.++.+.|+. .....+.++.++++.+.+.+.|++.|+.+..+.++.++
T Consensus 249 ~~~~l~~~l~~~~~~~~~~--~s~~~q~a~~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~ 320 (384)
T PRK12414 249 APAELMDEIRKVHQFMVFS--ADTPMQHAFAEALAE------PASYLGLGAFYQRKRDLLARELAGSRFELLPSEGSFFM 320 (384)
T ss_pred cCHHHHHHHHHHHhheecC--CCcHHHHHHHHHhcC------ChHHHHHHHHHHHHHHHHHHHHHhCCCeecCCCcceEE
Confidence 9999998887654322333 555555555454431 11234567788999999999999998887766666666
Q ss_pred EEEeCC--cchHHHHHHH-HHHCCceEEeec-CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 402 PIMVYN--PAKVSSFSRE-CLKQNVAIVTVG-FPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 402 ~~~~~~--~~~~~~~~~~-l~~~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
++.+.. .....+++.+ |.++||.+.+.. |.......+++||+++ .+++++++++++|.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 321 LARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred EEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 665542 2234566654 456699999732 3222223579999995 479999999998864
No 142
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.1e-25 Score=225.81 Aligned_cols=334 Identities=17% Similarity=0.179 Sum_probs=228.8
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC----CCeEEeCCcH
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK----PAAIVFGMGY 171 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sGs 171 (488)
..++||+.+.. .++. ++.+.+++.+.++.....+ +......+|++.+|+++ |. ++++++++++
T Consensus 33 ~~~i~l~~~~~-~~~~-~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 103 (391)
T PRK08361 33 ENVISLGIGEP-DFDT-PKNIKEAAKRALDEGWTHY-------TPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAY 103 (391)
T ss_pred cCeEEcCCCCC-CCCC-CHHHHHHHHHHHhcCCCCC-------CCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChH
Confidence 34688863321 1221 3566666666655421112 22233478888898887 32 2344444555
Q ss_pred HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 172 VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 172 ~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
+++..++.+++++|+.|+++.|+|..+...+...|.+++.++.+ |++++++.+.+ ..++++
T Consensus 104 ~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------------~~~~v~ 171 (391)
T PRK08361 104 EATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK------------RTRMIV 171 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc------------ccEEEE
Confidence 56677888888999999999999999999898999999888752 67778776653 134444
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---c
Q 040324 245 VVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 245 i~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g 318 (488)
+....+++|.+.+ +++|+++|+++++++|+||+|....+. +.........++ +.++++.||||.+|.+| |
T Consensus 172 -i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~-~~~i~~~s~SK~~~~~GlRiG 247 (391)
T PRK08361 172 -INYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYE--GAKHYPMIKYAP-DNTILANSFSKTFAMTGWRLG 247 (391)
T ss_pred -EeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeC--CCCCCCHhhcCC-CCEEEEecCchhcCCcHhhhh
Confidence 4456888999888 889999999999999999999843332 211112222222 35789999999999877 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDND 397 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 397 (488)
|+++++++++.+.........+ .+.+...++..+|+. ....+..++.+++++++.+.+.+.|+++ |+.+..+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g 322 (391)
T PRK08361 248 FVIAPEQVIKDMIKLHAYIIGN--VASFVQIAGIEALRS---KESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKG 322 (391)
T ss_pred hhccCHHHHHHHHHHHhhhccC--CChHHHHHHHHHhcC---CcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCE
Confidence 9999999988876543322222 455555555555432 1111245677888899999999999987 777776666
Q ss_pred CCeEEEEeCC-cchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 398 SPVMPIMVYN-PAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 398 ~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+.++++.+.. .....++.+.|++ +||.+.+.. .+...+.+++||++. .+++++++++++|.+++++
T Consensus 323 ~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~-~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 323 AFYVFANIDETGMSSEDFAEWLLEKARVVVIPGT-AFGKAGEGYIRISYA--TSKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCch-hhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 6677777753 2356788888875 599998732 222334579999985 5788999999999988764
No 143
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2.1e-25 Score=223.65 Aligned_cols=316 Identities=21% Similarity=0.244 Sum_probs=223.8
Q ss_pred cceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEe-CCcHHHH-
Q 040324 99 VSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVF-GMGYVTN- 174 (488)
Q Consensus 99 g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~-~sGs~a~- 174 (488)
+++++||++| ++++ .+|.+.+++.+.+.... .+. . +...++++.+|++++.+ +.+++ ++|+...
T Consensus 33 ~~~~i~l~~~~~~~~---~~~~~~~~~~~~~~~~~-~y~-------~-~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i 100 (361)
T PRK00950 33 PESIIKLGSNENPLG---PSPKAVEAIEKELSKIH-RYP-------E-PDAPELREALSKYTGVPVENIIVGGDGMDEVI 100 (361)
T ss_pred ccceEEccCCCCCCC---CCHHHHHHHHHHHHhhc-CCC-------C-CCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHH
Confidence 5688999866 4444 24778888887776531 121 1 12378999999999864 34555 7887654
Q ss_pred hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc
Q 040324 175 SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI 249 (488)
Q Consensus 175 ~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v 249 (488)
..++..+.++|+.|+++.|.|+.+...++..|.+++.++.+ |++++++.+.. ..+++++ ..+
T Consensus 101 ~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~v~~-~~p 167 (361)
T PRK00950 101 DTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITE------------KTKVIFL-CTP 167 (361)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhcc------------CCCEEEE-eCC
Confidence 56667778899999999999999888888889999888732 56777766542 1344444 477
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHH
Q 040324 250 YSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKEL 326 (488)
Q Consensus 250 ~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~ 326 (488)
++++|.+.+.+++.++|+++|+++|+||+|. .+. +........ ..+..++++||||++|.+| ||+++++++
T Consensus 168 ~nptG~~~~~~~l~~l~~~~~~~li~De~y~--~~~--~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~ 241 (361)
T PRK00950 168 NNPTGNLIPEEDIRKILESTDALVFVDEAYV--EFA--EYDYTPLAL--EYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL 241 (361)
T ss_pred CCCCCCCcCHHHHHHHHHHCCcEEEEECchh--hhC--ccchHHHHH--hcCCEEEEEeehHhhcCchhhcchhcCCHHH
Confidence 8999999999999999999999999999997 443 111111111 1123588899999999888 999999999
Q ss_pred HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeC
Q 040324 327 IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVY 406 (488)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 406 (488)
++.+...... ++ .+++.++++.++++.. +..++..++++++.+++.+.|. +.+. +.+++++++.+
T Consensus 242 ~~~~~~~~~~--~~--~~~~~~~~a~~~l~~~------~~~~~~~~~~~~~r~~l~~~l~---~~~~-~~~~~~i~~~~- 306 (361)
T PRK00950 242 IDYYMRAKTP--FS--LTRLSQAAAIAALSDK------EYIEKSIEHGIKSREYLYNELP---FKVY-PSEANFVLVDV- 306 (361)
T ss_pred HHHHHHhcCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHhhcC---eeEC-CCcceEEEEEC-
Confidence 9888765543 22 5666666666665421 1345556666666666666664 4443 44567777776
Q ss_pred CcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 407 NPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
......+++++|.++||.+.+.. .+...+.+++||+++ +.+|+++++++|++++
T Consensus 307 ~~~~~~~~~~~l~~~gv~v~~~~-~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 307 TPMTAKEFCEELLKRGVIVRDCT-SFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred CCCCHHHHHHHHHHCCEEEeeCC-ccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 44467799999999999998722 122234578999984 8899999999998875
No 144
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.95 E-value=2.1e-25 Score=222.22 Aligned_cols=316 Identities=19% Similarity=0.215 Sum_probs=228.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHH-HHhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYV-TNSS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~-a~~~ 176 (488)
+.+.|||+++++ +++. +|.+.+++.+++... ..++ ... ..++++.+|++++.+ +.+++++|+. +...
T Consensus 18 ~~~~i~l~~~~~-~~~~-~~~~~~a~~~~~~~~-~~y~-------~~~-~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~ 86 (346)
T TIGR01141 18 GKEVIKLNSNEN-PFGP-PPKAKEALRAEADKL-HRYP-------DPD-PAELKQALADYYGVDPEQILLGNGSDEIIEL 86 (346)
T ss_pred CCceEEccCCCC-CCCC-CHHHHHHHHHhHHHh-hcCC-------CCC-HHHHHHHHHHHhCcChHHEEEcCCHHHHHHH
Confidence 457999987655 4443 578888888876542 2221 111 278999999999853 4566666655 5566
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS 251 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s 251 (488)
++.++.++++.|+++.|+|+.+...+...|.+++.++.+ |++++++.+.+ ..+ +|++....+
T Consensus 87 ~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~-~v~l~~p~N 153 (346)
T TIGR01141 87 LIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDD------------KPK-LVFLCSPNN 153 (346)
T ss_pred HHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCC------------CCC-EEEEeCCCC
Confidence 777788899999999999998887788889999888753 67777765422 234 444557789
Q ss_pred CCCCCCChHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHH
Q 040324 252 MEGELCKLPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKEL 326 (488)
Q Consensus 252 ~~G~~~~l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~ 326 (488)
++|...+++++.++|+.+ ++++|+||+|+ .+...+.. ...... .+.+++++|+||.+|.+| ||+++++++
T Consensus 154 ptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~--~~~~~~~~-~~~~~~--~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~ 228 (346)
T TIGR01141 154 PTGNLLSRSDIEAVLERTPEDALVVVDEAYG--EFSGEPST-LPLLAE--YPNLIVLRTLSKAFGLAGLRIGYAIANAEI 228 (346)
T ss_pred CCCCCCCHHHHHHHHHhCCCCcEEEEECchh--hhcCCccH-HHHHhh--CCCEEEEehhhHhhhchhhhceeeecCHHH
Confidence 999999999999999887 99999999998 44432221 122221 123688899999998777 999999999
Q ss_pred HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEe
Q 040324 327 IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMV 405 (488)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 405 (488)
++.++..... ++ .+++.+.++.+.++.. ...++.+++++++.+++++.|++. |+.+. +..+.++++.+
T Consensus 229 ~~~~~~~~~~--~~--~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~ 297 (346)
T TIGR01141 229 IDALNKVRAP--FN--LSRLAQAAAIAALRDD------DFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRF 297 (346)
T ss_pred HHHHHhccCC--CC--CCHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEec
Confidence 9988765432 33 5677777666665432 145677888999999999999987 87765 34567777776
Q ss_pred CCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 406 YNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
.. ...++.++|.++||.+.+...... . .+++|++++ |++|+++++++|+
T Consensus 298 ~~--~~~~~~~~L~~~gI~v~~g~~f~~-~-~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 298 PR--DADALFEALLEKGIIVRDLNSYPG-L-PNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred CC--CHHHHHHHHHHCCeEEEeCCCcCC-C-CCeEEEecC---CHHHHHHHHHHhC
Confidence 54 567899999999999997432111 1 578999973 8999999998873
No 145
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.95 E-value=6e-25 Score=222.30 Aligned_cols=336 Identities=18% Similarity=0.175 Sum_probs=228.6
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC--------CCeEEeCCc-
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK--------PAAIVFGMG- 170 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~sG- 170 (488)
..+|||+.++. .++. ++.+.+++.+.+......+ +......++++.++++++. ++.+++++|
T Consensus 30 ~~~i~l~~~~~-~~~~-~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~ 100 (391)
T PRK07309 30 PGILKLTLGEP-DFTT-PDHVKEAAKRAIDANQSHY-------TGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGA 100 (391)
T ss_pred CCeEEcCCCCC-CCCC-CHHHHHHHHHHHhcCCCCC-------CCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 45788874432 2221 3556777776665321112 1222236888888887742 244555555
Q ss_pred HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 171 YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
++++..++.++.++++.|+++.|.|+.+...++..|.+++.++.+ |++.+++++++. .+..++++
T Consensus 101 ~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~---------~~~~~~i~ 171 (391)
T PRK07309 101 TEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQ---------GDKLKAVI 171 (391)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhcc---------CCCeEEEE
Confidence 556677788888999999999999999998889999998888753 677887777541 01234455
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---c
Q 040324 245 VVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 245 i~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g 318 (488)
++ ...+++|...+ +++|+++|++||+++|+||+|....+ .+..........+ +..++++||||.+|.+| |
T Consensus 172 l~-~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~--~~~~~~~~~~~~~-~~~i~~~S~SK~~g~~GlRvG 247 (391)
T PRK07309 172 LN-YPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTY--TGEPHVSIAEYLP-DQTILINGLSKSHAMTGWRIG 247 (391)
T ss_pred EE-CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceee--CCCCCCCHHHhcc-CCEEEEecChhhccCccceeE
Confidence 44 45788887765 89999999999999999999984443 2221111111222 34688999999999888 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+..... +.. .+.+++.+.++.+.|+. ...+....+++++++.+++.+.|++.|+.+..+.++
T Consensus 248 ~~v~~~~~~~~~~~~~~-~~~-~~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~gg 320 (391)
T PRK07309 248 LIFAPAEFTAQLIKSHQ-YLV-TAATTMAQFAAVEALTN-----GKDDALPMKKEYIKRRDYIIEKMTDLGFKIIKPDGA 320 (391)
T ss_pred EEEeCHHHHHHHHHHHh-hcc-cCCChHHHHHHHHHHhC-----ChhHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCee
Confidence 99999999988876433 122 22555555555555542 111334567788889999999999989887777666
Q ss_pred CeEEEEeCCc--chHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 399 PVMPIMVYNP--AKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 399 ~~~~~~~~~~--~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.++++.++.. .+..+++++++ ++||.+.+.. .+.+.+.+++||+++ .+.+++++++++|.++++++
T Consensus 321 ~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~-~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 321 FYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGA-AFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCch-hhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 6667666532 24567887765 5699998732 223334689999985 47899999999999998765
No 146
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=3.1e-25 Score=225.27 Aligned_cols=333 Identities=16% Similarity=0.179 Sum_probs=226.9
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCccc-CCCChhhHHHHHHHHHHHhCCC-CeEEeCCc-HHHHhh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRV-DGGTLALHNELEECVARFVGKP-AAIVFGMG-YVTNSS 176 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~-~~g~~~~~~~l~~~la~~~g~~-~~i~~~sG-s~a~~~ 176 (488)
..|+|.+ +.+..++.+.+++.+.+........++.. ..+..+..+++++.++++++.+ ..+++++| ++++..
T Consensus 18 ~~yl~~~-----~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~ 92 (397)
T TIGR01976 18 RVFFDNP-----AGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFL 92 (397)
T ss_pred eEEecCC-----ccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHH
Confidence 3667754 33334678899999988775432221111 1123355689999999999974 34555544 444433
Q ss_pred hhhc---ccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 177 ILPV---LMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 177 ~~~~---~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
++.+ ..++|+.|++..+.|.+... .++..|++++.++.+ |++++++.+.+ ++.+
T Consensus 93 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~-------------~~~l 159 (397)
T TIGR01976 93 LSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSP-------------RTRL 159 (397)
T ss_pred HHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCC-------------CceE
Confidence 3333 36889999999999988653 345678988887653 57777777643 3457
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcccEEEeC
Q 040324 244 VVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGS 323 (488)
Q Consensus 244 vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~Gg~i~~~ 323 (488)
|++..+.+++|.+.|+++|.++|+++|+++++||+|+.|.. . .++...++|+++.|++|++|...|+++++
T Consensus 160 v~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~------~---~~~~~~~~d~~~~s~~K~~g~~~G~l~~~ 230 (397)
T TIGR01976 160 VAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHG------L---IDVQATGADFLTCSAYKFFGPHMGILWGR 230 (397)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhcccc------C---CCHHHcCCCEEEEechhhcCCceEEEEEc
Confidence 77788999999999999999999999999999999974321 1 12222346899999999998766999999
Q ss_pred HHHHHHHHhhCCCCccc--------CCCCHHHHHHHHHHHHHHhccCCC----------chHHHHHHHHHHHHHHHHHHH
Q 040324 324 KELIQYLKYNCPAHLYA--------TSISPPAAEQIISAIQVVIGEDGS----------CRGAQKLARIRENSNFFRSKL 385 (488)
Q Consensus 324 ~~~~~~~~~~~~~~~~~--------~~~~p~~~aa~~a~L~~i~~~~~~----------~~~~~~~~~~~~~~~~l~~~L 385 (488)
+++++.+......+.+. .+.+....++..++++.+...... ...+...++..+..+++++.|
T Consensus 231 ~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L 310 (397)
T TIGR01976 231 PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGL 310 (397)
T ss_pred HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99887765432221111 124445566666777776432110 013556777788899999999
Q ss_pred HhCC-CeecCC----CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecC--------CCccCCCCeEEEeecCCCCHHH
Q 040324 386 QKMG-FEVLGD----NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGF--------PATPLLLARARICISASHTKED 452 (488)
Q Consensus 386 ~~~g-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--------~~~~~~~~~iRi~~~~~~t~ed 452 (488)
++++ +.+..+ ..++++.+.+. .....++.++|.++||.+....+ +..+...+++|++++..+|++|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~d 389 (397)
T TIGR01976 311 SDLPGVTLYGVARLAARVPTVSFTVH-GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEE 389 (397)
T ss_pred hcCCCEEEeCCCCccCCCceEEEEeC-CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHH
Confidence 8875 777654 23566665553 23466899999999999985322 1222234689999999999999
Q ss_pred HHHHHHHH
Q 040324 453 LIEALEVI 460 (488)
Q Consensus 453 id~~l~~l 460 (488)
+++++++|
T Consensus 390 i~~l~~~l 397 (397)
T TIGR01976 390 VDRLLEAL 397 (397)
T ss_pred HHHHHHhC
Confidence 99999874
No 147
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=4.9e-25 Score=222.62 Aligned_cols=333 Identities=15% Similarity=0.135 Sum_probs=227.8
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C---CC-eEEeCCc-
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K---PA-AIVFGMG- 170 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~-~i~~~sG- 170 (488)
..++||+.++. .++ .++.+.+++.+.++.....+ +......+|++.+|++++ . ++ .+++++|
T Consensus 28 ~~~i~l~~~~p-~~~-~~~~~~~a~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~ 98 (387)
T PRK07683 28 DNLISLTIGQP-DFP-TPSHVKEAAKRAITENYTSY-------THNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGA 98 (387)
T ss_pred CCeEEecCCCC-CCC-CCHHHHHHHHHHHhcCCCCC-------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 45688874432 122 23567788888776532222 222334788889998873 2 23 4555555
Q ss_pred HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 171 YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
++++..++..+.++|+.|+++.|.|..+...++..|++++.++.+ |.+++++.+.+ ..++ +
T Consensus 99 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~-i 165 (387)
T PRK07683 99 SEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITE------------KTRC-V 165 (387)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCc------------CceE-E
Confidence 566677777888999999999999999988889999999888754 45667666542 1344 4
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---c
Q 040324 245 VVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 245 i~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g 318 (488)
++....+++|...+ +++|+++|+++|+++|+||+|....++.......++.+ ..+..++++||||.+|.+| |
T Consensus 166 ~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~s~SK~~~~pGlRiG 243 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPE--MREKTIVINGLSKSHSMTGWRIG 243 (387)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccC--CcCCeEEEeeccccccCccceeE
Confidence 55667888998765 88999999999999999999985444332222222212 1234688999999999888 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+..... +... +.+.+.+.++.+.|+. +..+.++.+++++++.+.+.+.|++.++.+..+.++
T Consensus 244 ~i~~~~~l~~~~~~~~~-~~~~-~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 316 (387)
T PRK07683 244 FLFAPSYLAKHILKVHQ-YNVT-CASSISQYAALEALTA-----GKDDAKMMRHQYKKRRDYVYNRLISMGLDVEKPTGA 316 (387)
T ss_pred EEEcCHHHHHHHHHHHH-hccC-CCChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCee
Confidence 99999999988875432 2221 2444555555455432 122456778888999999999999988877666555
Q ss_pred CeEEEEeCC-cchHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 399 PVMPIMVYN-PAKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 399 ~~~~~~~~~-~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.++++.+.. .....+++..++ ++||.+.+.. .+.+.+.+++||++. .+++++.+++++|.+++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~-~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 317 FYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGS-AFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred EEEEEecccCCCCHHHHHHHHHHhCCEEEcCch-hhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 555655543 234556777654 5699998732 222334589999984 5899999999999988754
No 148
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=7.1e-25 Score=215.74 Aligned_cols=319 Identities=20% Similarity=0.233 Sum_probs=246.8
Q ss_pred eeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC-CC-CeEEeCCcHHHH-hh
Q 040324 101 RCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG-KP-AAIVFGMGYVTN-SS 176 (488)
Q Consensus 101 ~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g-~~-~~i~~~sGs~a~-~~ 176 (488)
..+|+++| |++|.+ |.+.+++.+.++.+.. | ..+...+++++++++++ .+ +.++++.|+... ..
T Consensus 23 ~~i~LssNenP~gp~---~~~~~~~~~~~~~~~r-Y--------Pd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~ 90 (356)
T COG0079 23 GIIKLSSNENPYGPP---PKVIEAIRAALDKLNR-Y--------PDPDYRELRAALAEYYGVVDPENVLVGNGSDELIEL 90 (356)
T ss_pred cceeecCCCCCCCCC---HHHHHHHHHHHHhhcc-C--------CCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHH
Confidence 58999876 655544 7788888887764311 1 12235899999999999 54 678888898876 67
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM 252 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~ 252 (488)
+++++..+||.|++..|+|+.+...++..|++++.++.. |++.+.+.+.+ +..+|++....++
T Consensus 91 l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~-------------~~~lv~i~nPNNP 157 (356)
T COG0079 91 LVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRD-------------KTKLVFLCNPNNP 157 (356)
T ss_pred HHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccccccCHHHHHHhhhc-------------CCCEEEEeCCCCC
Confidence 888999999999999999999999999999999999874 56666665553 2336666778889
Q ss_pred CCCCCChHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHH
Q 040324 253 EGELCKLPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELI 327 (488)
Q Consensus 253 ~G~~~~l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~ 327 (488)
+|...+.++|.++++.. +.+||+||+|. -|.+ ........ . .++.+++.||||+||.+| ||++++++++
T Consensus 158 TG~~~~~~~l~~l~~~~~~~~~vVvDEAY~--eF~~--~~~~~l~~-~-~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 158 TGTLLPREELRALLEALPEGGLVVIDEAYI--EFSP--ESSLELLK-Y-PPNLIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred CCCCCCHHHHHHHHHhCCCCcEEEEeCchh--hcCC--chhhhhcc-C-CCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence 99999888887777754 88999999998 6665 22222222 2 333688999999999988 9999999999
Q ss_pred HHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC
Q 040324 328 QYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN 407 (488)
Q Consensus 328 ~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 407 (488)
+.++....+ |+ .|.++.+++.++|+.- +..++..+++.+.++++.+.|+.+|+.-+.+..++++.+.+..
T Consensus 232 ~~l~~vr~p--~~--v~~~a~~aa~aal~~~------~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~~~ 301 (356)
T COG0079 232 AALNKVRPP--FN--VSSPALAAAIAALRDA------DYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRVPD 301 (356)
T ss_pred HHHHHhcCC--CC--CCHHHHHHHHHHcccH------HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEECCC
Confidence 999987765 33 7778888888877642 3667888899999999999999998542334457888787766
Q ss_pred cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 408 PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.. ...+.++|+++||+++.... .+...+++|+++ -|+||.++++++|.++++.
T Consensus 302 ~~-~~~l~~~L~~~giivR~~~~--~~~~~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 302 AE-AAALAEALLKKGILVRDCSS--VGLLPGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred cc-HHHHHHHHHHCCEEEEeCCC--CCCCCCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 44 66899999999999997542 334567999998 5888889999999998754
No 149
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=5.1e-25 Score=222.67 Aligned_cols=332 Identities=17% Similarity=0.134 Sum_probs=226.3
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC------C-CCeEEeCCc-
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG------K-PAAIVFGMG- 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~-~~~i~~~sG- 170 (488)
|..+++|.++.+ +++ .++.+.+++.+.+......+ +......++++.+|++++ . ++.+++++|
T Consensus 31 ~~~~i~l~~g~~-~~~-~~~~v~~a~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 101 (387)
T PRK08960 31 GHDVIHLEIGEP-DFT-TAEPIVAAGQAALAAGHTRY-------TAARGLPALREAIAGFYAQRYGVDVDPERILVTPGG 101 (387)
T ss_pred CCCeEEeCCCCC-CCC-CCHHHHHHHHHHHhcCCCcc-------CCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCc
Confidence 566788764332 222 24677888877776422222 122233788899998873 1 244555554
Q ss_pred HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 171 YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
+++...++.++..+||.|+++.|.|+.+...+...|.++..++.+ |++++++.+++ .++.+
T Consensus 102 ~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~~~i 169 (387)
T PRK08960 102 SGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNA------------DTVGA 169 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCc------------cceEE
Confidence 556677778888999999999999999999888889988877642 56777766543 13444
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--- 317 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--- 317 (488)
+ +....+++|...+ +++|+++|++||+++|+||+|. .+...+.. ....... +..++++||||.+|.+|
T Consensus 170 ~-i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~--~~~~~~~~-~~~~~~~--~~vi~~~S~SK~~g~~GlRi 243 (387)
T PRK08960 170 L-VASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYH--GLTYGVDA-ASVLEVD--DDAFVLNSFSKYFGMTGWRL 243 (387)
T ss_pred E-EECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccc--ccccCCCC-CChhhcc--CCEEEEeecccccCCcccEE
Confidence 4 4456788998876 6678888999999999999998 33322211 1223332 23688899999999878
Q ss_pred cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee-cCCC
Q 040324 318 GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEV-LGDN 396 (488)
Q Consensus 318 g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~ 396 (488)
||+++++++++.+......+..+ .+.+.+.++.+.++- ...+...+.++.++++.+.+.+.|++.|+.+ ..+.
T Consensus 244 G~~~~~~~~~~~~~~~~~~~~~~--~s~~~q~a~~~~l~~----~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~ 317 (387)
T PRK08960 244 GWLVAPPAAVPELEKLAQNLYIS--ASTPAQHAALACFEP----ETLAILEARRAEFARRRDFLLPALRELGFGIAVEPQ 317 (387)
T ss_pred EEEEcCHHHHHHHHHHHhhhccC--CCHHHHHHHHHHhhc----CcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcCCC
Confidence 99999999998887654432333 566666666666531 1123566778888999999999999988765 3455
Q ss_pred CCCeEEEEeCC-cchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 397 DSPVMPIMVYN-PAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 397 ~~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
++.++++.+.. .....+++++|++ +||.+.|......+...+++|++++. +.+++.+++++|.++++
T Consensus 318 g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 318 GAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGLR 386 (387)
T ss_pred eeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 66777777654 2346788888775 69999973211112234699999963 68888888888877653
No 150
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7e-25 Score=221.66 Aligned_cols=325 Identities=15% Similarity=0.118 Sum_probs=225.6
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC----CCeEEeCCcHH-HHhhhhhcccCCCcEEEEe
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK----PAAIVFGMGYV-TNSSILPVLMGKGSLIISD 191 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sGs~-a~~~~~~~~~~~~~~Vl~~ 191 (488)
++.+.+|+.+.+..... .......|..+..+.+++.+++++|. ++.+++++|+. +...++..++.+||.|+++
T Consensus 42 ~~~~~~a~~~~~~~~~~--~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~ 119 (389)
T PRK05957 42 PPEAIEALNNFLANPEN--HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILN 119 (389)
T ss_pred CHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEe
Confidence 45667777666543211 11112235656667777777777775 45677777765 4456677778899999999
Q ss_pred CCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHH
Q 040324 192 SLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEII 263 (488)
Q Consensus 192 ~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~ 263 (488)
.|+|..+...++..|.+++.++.+ |++++++.+++ ..++++ +...++++|.+.+ +++|+
T Consensus 120 ~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~------------~~klv~-~~~p~NPtG~~~~~~~~~~i~ 186 (389)
T PRK05957 120 TPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAITP------------KTRAIV-TISPNNPTGVVYPEALLRAVN 186 (389)
T ss_pred CCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCc------------CceEEE-EeCCCCCCCcCcCHHHHHHHH
Confidence 999988887788889998888754 67888777643 245444 5567889998887 88999
Q ss_pred HHHHHcCcEEEEEccccccccCCCCCCcchhcCC-CCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcc
Q 040324 264 TICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGV-DTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLY 339 (488)
Q Consensus 264 ~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v-~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~ 339 (488)
++|++||+++|+||+|....++ +......... +..+..|++.||||.+|.+| ||+++++++++.+.........
T Consensus 187 ~~a~~~~~~li~De~y~~~~~~--~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~ 264 (389)
T PRK05957 187 QICAEHGIYHISDEAYEYFTYD--GVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILI 264 (389)
T ss_pred HHHHHcCcEEEEeccchhccCC--CCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhccc
Confidence 9999999999999999844333 2111111111 22334688899999999888 9999999999998765542222
Q ss_pred cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CC-eecCCCCCCeEEEEeCCcchHHHHHHH
Q 040324 340 ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GF-EVLGDNDSPVMPIMVYNPAKVSSFSRE 417 (488)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (488)
+ .+.+...++..+|+. ..+..++.+++++++.+.+.+.|++. ++ .+..+.++.++++.+....+..+++++
T Consensus 265 ~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~ 337 (389)
T PRK05957 265 C--PPVVSQYAALGALQV-----GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQ 337 (389)
T ss_pred C--CCcHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHH
Confidence 2 444444544555532 11245667778899999999999887 42 445555567777777655667789999
Q ss_pred HHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 418 CLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 418 l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
|++ +||.+.+... +....++++||+++ ..+++++++++++|.+.++++
T Consensus 338 l~~~~gv~v~pg~~-f~~~~~~~iRis~~-~~~~~~l~~~~~~l~~~~~~~ 386 (389)
T PRK05957 338 LIREYRVAVIPGTT-FGMKNGCYLRIAYG-ALQKATAKEGIERLVQGLKTI 386 (389)
T ss_pred HHHHCCEEEccchh-hCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHHhh
Confidence 985 6999997321 22223469999984 358999999999999988764
No 151
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-24 Score=220.75 Aligned_cols=342 Identities=17% Similarity=0.173 Sum_probs=229.6
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHc-CCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CC-eEEeCC
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKY-SHSTCSSRVDGGTLALHNELEECVARFV----GK---PA-AIVFGM 169 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~s 169 (488)
+.+++||+++++... .++.+.+++.+.+... ...+ +......+|++.+|+++ +. .+ .+++++
T Consensus 32 ~~~~~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~Y-------~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~ 102 (403)
T PRK08636 32 GEDIIDFSMGNPDGP--TPQHIIDKLCESAQKPKTHGY-------SVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATM 102 (403)
T ss_pred CCCEEEcCCcCCCCC--CCHHHHHHHHHHhcCCccCCC-------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECC
Confidence 567889875433211 1334555555544321 1112 22233367888888876 42 23 577888
Q ss_pred cHHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 170 GYVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 170 Gs~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
|+... ..++.+++.+||.|+++.|+|+.+...+...|++++.++.+ |++++.+.+++...+.. ++.+
T Consensus 103 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~-----~~~~ 177 (403)
T PRK08636 103 GSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESS-----PKPK 177 (403)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhcc-----CCce
Confidence 86654 77888899999999999999999999999999999888642 45655444544333221 2244
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcc
Q 040324 242 IMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~G 317 (488)
.+++ ...++++|.+.+ +++|+++|++|+++||+||+|....+ .+........++. .+..+.++||||++|.+|
T Consensus 178 ~i~~-~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 254 (403)
T PRK08636 178 YVVV-NFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITF--DGYKTPSILEVEGAKDVAVESYTLSKSYNMAG 254 (403)
T ss_pred EEEE-eCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhcc--CCCCCCChhcCCCccccEEEEEecccccCCcc
Confidence 4444 455788888775 78899999999999999999984333 2322122222322 234566899999999888
Q ss_pred ---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC
Q 040324 318 ---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG 394 (488)
Q Consensus 318 ---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 394 (488)
||+++++++++.+........++ .+.+...++..+++ + ..+..+++++.++++.+.+.+.|++.|+.+..
T Consensus 255 lRiG~iv~~~~li~~~~~~~~~~~~~--~~~~~q~~~~~~~~---~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 327 (403)
T PRK08636 255 WRVGFVVGNKKLVGALKKIKSWLDYG--MFTPIQVAATIALD---G--DQSCVEEIRETYRKRRDVLIESFANAGWELQK 327 (403)
T ss_pred ceeeeeeCCHHHHHHHHHHHHHhccc--CChHHHHHHHHHHh---C--cHHHHHHHHHHHHHHHHHHHHHHHHCCCcccC
Confidence 99999999998887654321222 33444333333332 1 12356677888899999999999998887777
Q ss_pred CCCCCeEEEEeCCcc---hHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 395 DNDSPVMPIMVYNPA---KVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 395 ~~~~~~~~~~~~~~~---~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.++.++|+.+.... ...++++.+++ +||.+.|.. .+...+.+++||++. .+++++++++++|.++++.+
T Consensus 328 p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~-~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~~ 401 (403)
T PRK08636 328 PRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGI-GFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKEL 401 (403)
T ss_pred CCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecch-hhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHhh
Confidence 777888888876432 35678887664 699999732 222334579999984 68999999999999998763
No 152
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=5e-25 Score=223.95 Aligned_cols=337 Identities=15% Similarity=0.158 Sum_probs=232.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCccc--CCCChhhHHHHHHHHHHHhCC-C-CeEEeCCc-HHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRV--DGGTLALHNELEECVARFVGK-P-AAIVFGMG-YVT 173 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~-~-~~i~~~sG-s~a 173 (488)
+.-|+|-++ .+ ..++.+.+++.+.++........... .....+..+++++.+|+++|. + +.+++++| +++
T Consensus 19 ~~~yld~a~---~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~ 93 (401)
T PRK10874 19 AGVYLDSAA---TA--LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTES 93 (401)
T ss_pred ceEEEeCCc---cc--CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHH
Confidence 356777543 23 23567888888877654222111000 011244568899999999997 3 45555555 555
Q ss_pred Hhhhhhcc----cCCCcEEEEeCCCchHHH----HHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 174 NSSILPVL----MGKGSLIISDSLNHNSIV----NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 174 ~~~~~~~~----~~~~~~Vl~~~~~h~~~~----~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+..++..+ .++|+.|++..+.|++.. ..++..|.+++.++.+ |++++++.+.+ +
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------------~ 160 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITP-------------R 160 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCc-------------C
Confidence 56666665 378999999999998753 2345678888888753 67777777643 3
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GY 319 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~ 319 (488)
+.+|++..+.+++|.+.|+++|.++|+++|+++|+|++|+.|.+. .++...++|+++.|++|.+|..| |+
T Consensus 161 t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~ 231 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFP---------ADVQALDIDFYAFSGHKLYGPTGIGV 231 (401)
T ss_pred cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCccccccc---------CCchhcCCCEEEEecccccCCCccEE
Confidence 346767888999999999999999999999999999999855442 12222346899999999888777 99
Q ss_pred EEeCHHHHHHHHhhCCC------------------Cccc-CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHH
Q 040324 320 IAGSKELIQYLKYNCPA------------------HLYA-TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNF 380 (488)
Q Consensus 320 i~~~~~~~~~~~~~~~~------------------~~~~-~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (488)
++.++++++.+.....+ ..+. .+.+.....+..++++.+... ...+..++..++.++
T Consensus 232 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~----g~~~~~~~~~~l~~~ 307 (401)
T PRK10874 232 LYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADI----DINQAESWSRSLATL 307 (401)
T ss_pred EEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Confidence 99999888765422100 0111 124445666666777766321 334567788888999
Q ss_pred HHHHHHhC-CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCcc-----CCCCeEEEeecCCCCHHHHH
Q 040324 381 FRSKLQKM-GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATP-----LLLARARICISASHTKEDLI 454 (488)
Q Consensus 381 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-----~~~~~iRi~~~~~~t~edid 454 (488)
+++.|+++ |+.+..+..++++.+.+.. ....++.+.|.++||.+.+......+ ...+.+|++++..+|++|+|
T Consensus 308 l~~~l~~~~g~~~~~~~~~~i~~~~~~~-~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid 386 (401)
T PRK10874 308 AEDALAKLPGFRSFRCQDSSLLAFDFAG-VHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVD 386 (401)
T ss_pred HHHHHhcCCCEEEeCCCCCcEEEEEECC-cCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHH
Confidence 99999887 8877765566676665533 34568888898899999863322110 11368999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 040324 455 EALEVISRIGDLV 467 (488)
Q Consensus 455 ~~l~~l~~~~~~~ 467 (488)
+++++|+++++.+
T Consensus 387 ~ll~al~~~~~~~ 399 (401)
T PRK10874 387 ALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 153
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.95 E-value=3.8e-25 Score=220.52 Aligned_cols=323 Identities=16% Similarity=0.177 Sum_probs=225.7
Q ss_pred eEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CC-eEEeCCcHHH
Q 040324 102 CLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PA-AIVFGMGYVT 173 (488)
Q Consensus 102 ~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sGs~a 173 (488)
.+||++++. .++ .++.+.+++.+..... ..| .......+|++.+++++ |. ++ .+++++|+..
T Consensus 2 ~~~~~~g~p-~~~-~~~~~~~~~~~~~~~~-~~Y-------~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ 71 (350)
T TIGR03537 2 LFDFGTGDP-KEP-TPPFIRKALIDAVPEV-SQY-------PSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE 71 (350)
T ss_pred eEeccCCCC-CCC-CCHHHHHHHHHHHhcc-CCC-------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 577765433 222 2355666666654321 112 22222368888888876 42 23 6778887764
Q ss_pred H-hhhhhcccCCC---cEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 174 N-SSILPVLMGKG---SLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 174 ~-~~~~~~~~~~~---~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
. ..++.+++++| |.|+++.|+|..+...++..|++++.++.+ |++++++.+.+ ..++
T Consensus 72 ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------~~~~ 139 (350)
T TIGR03537 72 AIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE------------ETKI 139 (350)
T ss_pred HHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh------------ccEE
Confidence 4 56666777776 699999999999999999999999988753 67788777654 1455
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-- 317 (488)
++++ ...+++|...+ +++|.++|++||+++|+||+|....++.... .....++ +..++++||||.+|.+|
T Consensus 140 i~i~-~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~---~~~~~~~-~~~i~~~s~SK~~g~~GlR 214 (350)
T TIGR03537 140 VWIN-YPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPH---SALEVGI-ENVLAFHSLSKRSGMTGYR 214 (350)
T ss_pred EEEe-CCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCC---chhhcCc-CCEEEEeecccccCCcccc
Confidence 5555 56889998887 8999999999999999999998433332111 1111222 34688899999998887
Q ss_pred -cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC
Q 040324 318 -GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN 396 (488)
Q Consensus 318 -g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~ 396 (488)
||+++++++++.+......+ +.+.++...+++.+++.. .++..+.+++++++.+.+.+.|++.|+.+..+.
T Consensus 215 iG~~~~~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~------~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~~~~ 286 (350)
T TIGR03537 215 SGFVAGDEKLISFLRKLRANF--GVASPDFVQAAAKAAWSD------DNHVLERRKIFKRKRDLFIEFFNKVGLEYLYPD 286 (350)
T ss_pred ceeeecCHHHHHHHHHHHHhh--ccCCCHHHHHHHHHHhCC------cHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCC
Confidence 99999999998887654432 222444454555455431 224567788889999999999999988877666
Q ss_pred CCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 397 DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
++.++++.+.......++++.|.++||.+.+.. .+.....+++||++ ..+++++++++++|++
T Consensus 287 g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~-~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 287 ATFYLWVKVPSGIDAKDYALRLLENGIVVAPGE-NFGSGEEGYVRVAL--VPTLEECEEALRLWER 349 (350)
T ss_pred eEEEEEEECCCCCCHHHHHHHHHHCCEEEcCch-hhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence 666777877665567899999999999998722 22222357899988 3688999999998865
No 154
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.95 E-value=3e-25 Score=225.72 Aligned_cols=336 Identities=20% Similarity=0.220 Sum_probs=229.1
Q ss_pred ceeEEe-ccccccCCCCCCccchHHHHHHH-HHcCCCCCCcccCCCChhhHHHH----HHHHHHHhCCCCe-EEeCCcHH
Q 040324 100 SRCLNL-GSYNYLGFAAADEYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNEL----EECVARFVGKPAA-IVFGMGYV 172 (488)
Q Consensus 100 ~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~g~~~~-i~~~sGs~ 172 (488)
+++|+| .|.+++ +|.+.+++.+.+ .+++.+..+++...|. +...++ ++.+++++|.+.. +++++|++
T Consensus 19 ~~~~~~~~~~~~~-----~~~v~~a~~~~~~~~~~~g~~~~~~~~~~-~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~ 92 (402)
T cd00378 19 RETLELIASENFT-----SPAVMEAMGSDLTNKYAEGYPGKRYYGGC-EYVDEIEDLAIERAKKLFGAEYANVQPHSGSQ 92 (402)
T ss_pred HhCeeeeccCCcC-----CHHHHHHhcccccccccCCCCCCcccCCc-hHHHHHHHHHHHHHHHHhCCCceeeecCCcHH
Confidence 678888 444443 578888887765 5666666666654443 333333 3456788998654 66678999
Q ss_pred HHhhhhhcccCCCcEEEEeCCCchHHHHH-----HHhcCCeEEEe--eCC------CHHHHHHHHHHHHhcCCCCCCCCC
Q 040324 173 TNSSILPVLMGKGSLIISDSLNHNSIVNG-----ARGSGATIRVF--QHN------TPSHLEEVLREQIAEGQPRTRRPW 239 (488)
Q Consensus 173 a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~-----~~~~g~~v~~~--~~~------d~~~Le~~l~~~~~~~~p~~~~~~ 239 (488)
++..++.++.++||.|+++.+.|+++... ++..|.++..+ +.+ |++++++.+.+. .
T Consensus 93 a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~-----------~ 161 (402)
T cd00378 93 ANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEF-----------K 161 (402)
T ss_pred HHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhC-----------C
Confidence 99889999999999999999999766433 44456655444 333 788888887641 2
Q ss_pred ceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccccccc-CCccc
Q 040324 240 KKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSF-GSYGG 318 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~-g~~Gg 318 (488)
.++++++.+.+ |...++++|.++|++||+++|+||+|..|..+ .|.... .+. .+|++++|++|++ |..||
T Consensus 162 ~~~v~~~~~~~---~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~-~g~~~~---~~~--~~dv~~~s~sK~l~G~~gg 232 (402)
T cd00378 162 PKLIVAGASAY---PRPIDFKRFREIADEVGAYLLVDMAHVAGLVA-GGVFPN---PLP--GADVVTTTTHKTLRGPRGG 232 (402)
T ss_pred CCEEEecCccc---CCCcCHHHHHHHHHhcCCEEEEEccchhhhhh-cccCCC---ccc--CCcEEEeccccCCCCCCce
Confidence 45566556654 45668999999999999999999998644332 221111 111 3478899999999 44568
Q ss_pred EEEeCH-HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC-CC
Q 040324 319 YIAGSK-ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG-DN 396 (488)
Q Consensus 319 ~i~~~~-~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~ 396 (488)
++++++ ++++.+.........++ .++...+++..++..+.. ...++.++++.++.+++.+.|++.|+.+.. +.
T Consensus 233 ~i~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~a~~~al~~~~~----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 307 (402)
T cd00378 233 LILTRKGELAKKINSAVFPGLQGG-PHLHVIAAKAVALKEALE----PEFKAYAKQVVENAKALAEALKERGFKVVSGGT 307 (402)
T ss_pred EEEeccHHHHHHHHHHhCccccCC-chHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHHhCCCeEeecCC
Confidence 888876 88888876544333332 223333333334443311 134677888999999999999999988753 44
Q ss_pred CCCeEEEEeCCcc-hHHHHHHHHHHCCceEEeecCCCcc---CCCCeEEEeecCC----CCHHHHHHHHHHHHHHHHH
Q 040324 397 DSPVMPIMVYNPA-KVSSFSRECLKQNVAIVTVGFPATP---LLLARARICISAS----HTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 397 ~~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~~~~~~~~---~~~~~iRi~~~~~----~t~edid~~l~~l~~~~~~ 466 (488)
+++++++.+.... ....+.+.|.++||.+.+..+|..+ ...+.+|++++.. ++++|++++++.|.+++++
T Consensus 308 ~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 308 DNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 6788888775322 3456777777789999876666653 2457899998663 5799999999999997754
No 155
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.95 E-value=5.8e-25 Score=225.04 Aligned_cols=347 Identities=16% Similarity=0.145 Sum_probs=255.2
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC----C---CCeEEeCCcHH
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG----K---PAAIVFGMGYV 172 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~---~~~i~~~sGs~ 172 (488)
...++|+.++...---+...+.+++.+.++...... ...++......+|++.+++++. . ++.|++|+|++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~---~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q 165 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASL---ALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQ 165 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhh---hhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHH
Confidence 677888733211100011233344444444332221 1233444555788888888774 1 35788888888
Q ss_pred HH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc
Q 040324 173 TN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE 247 (488)
Q Consensus 173 a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e 247 (488)
.. ..+++.++.+||.|++++|+|......++..|.+++.++.+ |+++|++.++.. +.++++++.
T Consensus 166 ~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~-----------~~k~~y~~P 234 (459)
T COG1167 166 QALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQW-----------KPKAVYVTP 234 (459)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhc-----------CCcEEEECC
Confidence 65 77888889999999999999999999999999999999876 899999998863 257788888
Q ss_pred CcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEe
Q 040324 248 GIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAG 322 (488)
Q Consensus 248 ~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~ 322 (488)
..++++|...+ -++|.++|++||+++|.|+.|+ .+..++.........+..+..|.++||||++..+- ||+++
T Consensus 235 ~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~--el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~ 312 (459)
T COG1167 235 TFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYG--ELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVA 312 (459)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcch--hhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeC
Confidence 89999998886 6799999999999999999999 66555554434445555667899999999997533 99999
Q ss_pred CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC---CCeecCCCCCC
Q 040324 323 SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM---GFEVLGDNDSP 399 (488)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~~~~~~~~~~ 399 (488)
++++++.+.........+ .+.+.+++...-+. .+...++...+++.++++.+.+.+.|++. ...+..+.++.
T Consensus 313 p~~~~~~~~~~k~~~~~~--~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~ 387 (459)
T COG1167 313 PPELIEKLLRLKQAADLG--PSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGL 387 (459)
T ss_pred CHHHHHHHHHHHHHhcCC--CChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceE
Confidence 999999888766543333 44444333322222 22334467888889999999999999887 34667777788
Q ss_pred eEEEEeCCcchHHHHHHHHHHCCceEEeecCCC--ccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 400 VMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPA--TPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~--~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
++|+.+....+..++.+.++++|+.+.+.+..+ .+...+.+||+++ ..++++++++++.|.+++.+..
T Consensus 388 flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 388 FLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFS-SPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred EEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 999999888889999999999999999844333 2224579999995 5679999999999999987753
No 156
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.6e-25 Score=220.88 Aligned_cols=319 Identities=18% Similarity=0.190 Sum_probs=230.5
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hhh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SSI 177 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~~ 177 (488)
.+++||++|.+. ++ .+|.+.+++.++++.... + ......++++.+|++++.+ +.+++++|+... ..+
T Consensus 29 ~~~i~l~~n~~~-~~-~~~~v~~a~~~~~~~~~~-~--------p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~ 97 (359)
T PRK03158 29 EKIVKLASNENP-YG-PSPKVKEAIAAHLDELAL-Y--------PDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMI 97 (359)
T ss_pred CceEEecCCCCC-CC-CCHHHHHHHHHHHHHhhc-C--------CCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHH
Confidence 367999876432 43 357888888888765321 1 1223478999999999864 567777776654 566
Q ss_pred hhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCC
Q 040324 178 LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSME 253 (488)
Q Consensus 178 ~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~ 253 (488)
+.++.++|+.|+++.|+|+.+...+...|.++..++.+ |++++++.+.+ ..++ +++...++++
T Consensus 98 ~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~------------~~~~-v~i~~p~NPt 164 (359)
T PRK03158 98 SRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDE------------QTKI-VWICNPNNPT 164 (359)
T ss_pred HHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCC------------CCCE-EEEeCCCCCC
Confidence 77788999999999999999988888889999888754 56777665532 1344 4446779999
Q ss_pred CCCCChHHHHHHHHH--cCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHH
Q 040324 254 GELCKLPEIITICKR--YKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQ 328 (488)
Q Consensus 254 G~~~~l~~l~~l~~~--~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~ 328 (488)
|.+.+.+++.++++. +|+++|+||+|....++..........+ ..+..++++||||++|.+| ||+++++++++
T Consensus 165 G~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~ 242 (359)
T PRK03158 165 GTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLE--KYENLIVLRTFSKAYGLAALRVGYGIASEELIE 242 (359)
T ss_pred CCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHH--hcCCEEEEEechHhhcCcchhhehhcCCHHHHH
Confidence 999999999888887 5999999999984333211111112222 2345788999999999888 99999999999
Q ss_pred HHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCc
Q 040324 329 YLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNP 408 (488)
Q Consensus 329 ~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 408 (488)
.+...... ++ .+++.+.++.++|+.- +..++..+.++++.+++.+.|++.|+.+.. .++.++++.+.
T Consensus 243 ~~~~~~~~--~~--~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~g~~i~~~~~-- 309 (359)
T PRK03158 243 KLNIARPP--FN--TTRIAQYAAIAALEDQ------AFLKECVEKNAEGLEQYYAFCKEYGLFYYP-SQTNFIFVDTG-- 309 (359)
T ss_pred HHHHhcCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHCCCeeCC-CcCcEEEEECC--
Confidence 88765442 33 6777777777776421 244566677788888888999888877754 45667776653
Q ss_pred chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 409 AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
....++++.|+++||.+.+... +. ..+++||++ .+++|+++++++|+++
T Consensus 310 ~~~~~~~~~l~~~gv~v~~g~~-f~--~~~~iRi~~---~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 310 RDANELFEALLKKGYIVRSGAA-LG--FPTGVRITI---GLKEQNDKIIELLKEL 358 (359)
T ss_pred CCHHHHHHHHHHCCeEEeeCCC-CC--CCCeEEEec---CCHHHHHHHHHHHHHh
Confidence 3467899999999999997321 11 247899997 3899999999999875
No 157
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=1.4e-24 Score=219.62 Aligned_cols=332 Identities=14% Similarity=0.106 Sum_probs=221.9
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHH----hCCC-----CeEEeCCc
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARF----VGKP-----AAIVFGMG 170 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~----~g~~-----~~i~~~sG 170 (488)
...+||+.+.+ ... .++.+.+++.+.+......+ +......++++.++++ +|.+ +++++++|
T Consensus 24 ~~~i~l~~g~p-~~~-~~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 94 (387)
T PRK07777 24 TGAVNLGQGFP-DED-GPPEMLEAAQEAIAGGVNQY-------PPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGA 94 (387)
T ss_pred CCeEEccCCCC-CCC-CCHHHHHHHHHHHhcCCCCC-------CCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCc
Confidence 35688863322 111 13445666665554321112 2223336788888775 3432 34545555
Q ss_pred HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~--------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
++++..++.++..++|.|++..|+|+.+...++..|.+++.++.+ |++++++.+.+ ..++
T Consensus 95 ~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~~ 162 (387)
T PRK07777 95 TEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTP------------RTRA 162 (387)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCc------------ccEE
Confidence 667777778888999999999999999988888889988877642 56677666543 1444
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCC-CCCcchhcCCCCCCccEEEcccccccCCcc-
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKT-GRGVCELLGVDTSDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~-g~~~~~~~~v~p~~~di~~~t~sK~~g~~G- 317 (488)
++ +.+.++++|...+ +++|+++|++|++++|+||+|....+... .....+..+. .+.++++.||||.||.+|
T Consensus 163 v~-l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~g~~Gl 239 (387)
T PRK07777 163 LI-VNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGM--RERTVTISSAAKTFNVTGW 239 (387)
T ss_pred EE-EcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCC--cCcEEEEeechhhccCcCc
Confidence 44 5577888998764 88999999999999999999984333211 1112221111 345899999999999777
Q ss_pred --cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 318 --GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 318 --g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
||+++++++++.+........+. .+.+...++...+.. ..++.++.++.++++.+++.+.|++.|+.+..+
T Consensus 240 RiG~~~~~~~l~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 312 (387)
T PRK07777 240 KIGWACGPAPLIAAVRAAKQYLTYV--GGAPFQPAVAHALDH-----EDAWVAALRDSLQAKRDRLAAGLAEAGFEVHDS 312 (387)
T ss_pred eeEEEecCHHHHHHHHHHHhhcccC--CCCHHHHHHHHHHhC-----CcHHHHHHHHHHHHHHHHHHHHHHhCCCCccCC
Confidence 99999999998887654422232 333333333344331 123567788899999999999999988887766
Q ss_pred CCCCeEEEEeCC--cchHHHHHHHHHH-CCceEEeec-CC-CccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYN--PAKVSSFSRECLK-QNVAIVTVG-FP-ATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 396 ~~~~~~~~~~~~--~~~~~~~~~~l~~-~Gi~v~~~~-~~-~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
.++.++++.+.. .....++++.|++ +||.+.|.. |. ..+.+.+++||++. .+++++++++++|.++.
T Consensus 313 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~--~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 313 AGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC--KRDDTLDEAIRRLRALR 384 (387)
T ss_pred CcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec--CCHHHHHHHHHHHHHHh
Confidence 666666666532 1256789999975 599999732 22 12234578999984 47999999999998764
No 158
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=1.4e-25 Score=226.49 Aligned_cols=326 Identities=16% Similarity=0.216 Sum_probs=225.6
Q ss_pred CCCCCccchHHHHHHHHHcCCCCCCcccC-CCChhhHHHHHHHHHHHhCC-CCeEEeCCc-HHHHhhhhhccc----CCC
Q 040324 113 FAAADEYCTPRVIDSLKKYSHSTCSSRVD-GGTLALHNELEECVARFVGK-PAAIVFGMG-YVTNSSILPVLM----GKG 185 (488)
Q Consensus 113 ~~~~~~~v~~a~~~~l~~~~~~~~~~~~~-~g~~~~~~~l~~~la~~~g~-~~~i~~~sG-s~a~~~~~~~~~----~~~ 185 (488)
.+..++.+.+++.+.++.+.....+.... .......+++++.+|+++|. ++.+++++| ++++..++..+. +++
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g 88 (381)
T PRK02948 9 TTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNK 88 (381)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCC
Confidence 33446788888888887653333221111 01234568999999999985 456666655 667655555543 578
Q ss_pred cEEEEeCCCchHHHHH---HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC
Q 040324 186 SLIISDSLNHNSIVNG---ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC 257 (488)
Q Consensus 186 ~~Vl~~~~~h~~~~~~---~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~ 257 (488)
+.|+++...|+++... ++..|.++..++.+ |++++++.+.+ +..+|++..+++++|.+.
T Consensus 89 ~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-------------~~~lv~~~~~~n~tG~~~ 155 (381)
T PRK02948 89 KHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITP-------------DTVLASIQHANSEIGTIQ 155 (381)
T ss_pred CEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCC-------------CCEEEEEECCcCCcEeeh
Confidence 9999999999987665 34558888877643 78888877643 345777889999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHH-HHHHHhh--
Q 040324 258 KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKEL-IQYLKYN-- 333 (488)
Q Consensus 258 ~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~-~~~~~~~-- 333 (488)
|+++|.++|+++|+++++|++|++|... .++...++|+++.|++|.+|.+| |+++.++++ ...+...
T Consensus 156 ~~~~I~~l~~~~~~~vivD~~~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~~ 226 (381)
T PRK02948 156 PIAEIGALLKKYNVLFHSDCVQTFGKLP---------IDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWKPVFPGTT 226 (381)
T ss_pred hHHHHHHHHHHcCCEEEEEChhhccccc---------cCcccCCCCEEEecHHhcCCCCcEEEEEEcCCCCCCCcccCCC
Confidence 9999999999999999999999865433 12333456899999999998777 888777654 1111100
Q ss_pred -CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC-CCC----eEEEEeCC
Q 040324 334 -CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN-DSP----VMPIMVYN 407 (488)
Q Consensus 334 -~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~----~~~~~~~~ 407 (488)
...+.. .+.+.+..+++.++++.+.. +.++..++++++.+++++.|+++|+++.... ... ++.+.+.
T Consensus 227 ~~~~~~~-~t~~~~~~~a~~~al~~~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~- 299 (381)
T PRK02948 227 HEKGFRP-GTVNVPGIAAFLTAAENILK-----NMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK- 299 (381)
T ss_pred CCCCcCC-CCccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC-
Confidence 111122 24677777788888877532 4577889999999999999999987654321 122 2222222
Q ss_pred cchHHHHHHHHHHCCceEEeecC-------CC---------ccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 408 PAKVSSFSRECLKQNVAIVTVGF-------PA---------TPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~-------~~---------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.....++...|.++||.+..... |. .+...+++|++++..+|++|+|+++++|+++++.+
T Consensus 300 ~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~ 375 (381)
T PRK02948 300 GIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred CCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22356677788888999985221 10 11224789999999999999999999999988765
No 159
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=6.6e-25 Score=223.29 Aligned_cols=338 Identities=17% Similarity=0.223 Sum_probs=229.0
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCC-CCCcccC-CCChhhHHHHHHHHHHHhCCC--CeEEeCCcHH-H
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHS-TCSSRVD-GGTLALHNELEECVARFVGKP--AAIVFGMGYV-T 173 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~-~~~~~~~-~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~-a 173 (488)
+.-|+|.++ .+..++.+.+++.+.++..... ....... .-.....+++++.++++++.+ +.+++++|+. +
T Consensus 18 ~~~yld~~~-----~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~ 92 (403)
T TIGR01979 18 PLVYLDSAA-----TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTES 92 (403)
T ss_pred ceEEEeCcc-----ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHH
Confidence 346777653 3333567788887776553111 1111100 001235578999999999975 3555555554 4
Q ss_pred Hhhhhhc----ccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 174 NSSILPV----LMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 174 ~~~~~~~----~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+..++.+ ..++++.|+++.+.|++... .....|.+++.++.+ |++++++.+.+ +
T Consensus 93 l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~-------------~ 159 (403)
T TIGR01979 93 INLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTE-------------K 159 (403)
T ss_pred HHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhcc-------------C
Confidence 4444444 35789999999999988643 344668888888753 67778777653 3
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GY 319 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~ 319 (488)
+.+|++..+.+++|.+.|+++|.++|+++|+++++|++|+.|... .++...++|+++.|++|.+|..| |+
T Consensus 160 ~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~g~ 230 (403)
T TIGR01979 160 TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---------VDVQALDCDFYVFSGHKMYGPTGIGV 230 (403)
T ss_pred CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccc---------cCccccCCCEEEEecccccCCCCceE
Confidence 446667788899999999999999999999999999999854321 12223356899999999998777 99
Q ss_pred EEeCHHHHHHHHhhCCC------------------Ccc-cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHH
Q 040324 320 IAGSKELIQYLKYNCPA------------------HLY-ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNF 380 (488)
Q Consensus 320 i~~~~~~~~~~~~~~~~------------------~~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (488)
++.++++++.+.....+ ..+ ..+.+....+++.++++.+... ..+...++..+..++
T Consensus 231 l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~----g~~~~~~~~~~l~~~ 306 (403)
T TIGR01979 231 LYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAI----GLENIEAHEHELTAY 306 (403)
T ss_pred EEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Confidence 99998877765321110 001 1134555666667788776321 245678888999999
Q ss_pred HHHHHHhC-CCeecCCC----CCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCcc-----CCCCeEEEeecCCCCH
Q 040324 381 FRSKLQKM-GFEVLGDN----DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATP-----LLLARARICISASHTK 450 (488)
Q Consensus 381 l~~~L~~~-g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-----~~~~~iRi~~~~~~t~ 450 (488)
+++.|+++ |+++..+. .+.++.+.+.. ....++.+.|.++||.+....+...+ ...+.+||+++..+|+
T Consensus 307 l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~ 385 (403)
T TIGR01979 307 ALERLGEIPGLRIYGPRDAEDRGGIISFNVEG-VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTE 385 (403)
T ss_pred HHHHHhcCCCEEEeCCCCccccCceEEEEeCC-cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCH
Confidence 99999887 77776543 24566665532 34567888888889998742211110 1136899999999999
Q ss_pred HHHHHHHHHHHHHHHHhC
Q 040324 451 EDLIEALEVISRIGDLVG 468 (488)
Q Consensus 451 edid~~l~~l~~~~~~~~ 468 (488)
+|+++++++|+++++.++
T Consensus 386 ~di~~l~~~l~~~~~~~~ 403 (403)
T TIGR01979 386 EDIDALVEALKKVRKFFG 403 (403)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999999888764
No 160
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=5.5e-25 Score=220.04 Aligned_cols=318 Identities=15% Similarity=0.117 Sum_probs=227.6
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~ 176 (488)
++..++|+.|.. .++ .++.+.+++.+.+.... .+ ......+|++.+|++++.+ +.+++++|+... ..
T Consensus 28 ~~~~i~l~~nen-~~~-~~~~v~~a~~~~~~~~~-~Y--------p~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 28 DHSFVKLASNEN-PFG-CSPRVLDELQKSWLDHA-LY--------PDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQI 96 (366)
T ss_pred CCceEEeCCCCC-CCC-CCHHHHHHHHHHHHhcC-cC--------CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 457889875422 233 24678888887765531 11 1122378999999999874 577777776654 67
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM 252 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~ 252 (488)
++.+++++||.|+++.|+|+.+...++..|.+++.++.+ |++++++.+++ ..++++++ ...++
T Consensus 97 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~------------~~~~v~i~-~P~NP 163 (366)
T PRK01533 97 ISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDN------------DTKIVWIC-NPNNP 163 (366)
T ss_pred HHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCc------------CCcEEEEe-CCCCC
Confidence 778888999999999999999999999999999988864 67788776643 24555544 67899
Q ss_pred CCCCCChH---HHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHH
Q 040324 253 EGELCKLP---EIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKEL 326 (488)
Q Consensus 253 ~G~~~~l~---~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~ 326 (488)
+|.+.+.+ +|+++|++++ ++|+||+|. .|-..+........++..+..|++.||||++|.+| ||+++++++
T Consensus 164 TG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~--~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~ 240 (366)
T PRK01533 164 TGTYVNDRKLTQFIEGISENT-LIVIDEAYY--EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEEL 240 (366)
T ss_pred CCCCcCHHHHHHHHHhCCCCC-EEEEEccHH--HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHH
Confidence 99988755 4555555655 677899997 33322211111111223345789999999999888 999999999
Q ss_pred HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeC
Q 040324 327 IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVY 406 (488)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 406 (488)
++.+..... .+ +.+.+.+.++.++|+. .+..++.++..+++.+++.+.++.+|+++..+ .+.++++.+.
T Consensus 241 ~~~l~~~~~--~~--~~~~~~q~aa~~~l~~------~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~~-~~nf~~~~~~ 309 (366)
T PRK01533 241 IEKLNVVRL--PF--NVSSLAQKAATIAFGD------DEFIEEIVRVNTEGLRQYESFCKENEIPFYQS-QTNFIFLPVE 309 (366)
T ss_pred HHHHHHhcC--CC--CcCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHhCCCccCCC-cCcEEEEeCC
Confidence 998876543 23 3777777777777642 12445667777888888888888888887655 5677777663
Q ss_pred CcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 407 NPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
...++.+.|+++||.+++ + .+++||++ -+.+|.++++++|+++++...
T Consensus 310 ---~~~~~~~~l~~~GI~Vr~--~------~~~iRis~---~~~~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 310 ---NGGEIYEACAHAGFIIRP--F------PNGVRITV---GTREQNEGVISVLQQHFENKK 357 (366)
T ss_pred ---CHHHHHHHHHHCCcEEcc--C------CCceEEeC---CCHHHHHHHHHHHHHHHHhcc
Confidence 356799999999999995 2 25799998 689999999999999876543
No 161
>PRK09148 aminotransferase; Validated
Probab=99.95 E-value=1.2e-24 Score=221.06 Aligned_cols=341 Identities=16% Similarity=0.136 Sum_probs=232.0
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CC-eEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PA-AIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~-~i~~~sG 170 (488)
|+.++||+.+++ .++ .++.+.+++.+.+..- . . ..|+......+|++.+|+++ |. ++ .+++++|
T Consensus 29 ~~~~i~l~~~~p-~~~-~~~~~~~~~~~~~~~~-~-~----~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (405)
T PRK09148 29 GADIIDLGMGNP-DLP-TPQHIVDKLCETAQDP-R-T----HRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLG 100 (405)
T ss_pred CCCeEEcCCCCC-CCC-CCHHHHHHHHHHHcCc-c-c----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC
Confidence 677899875432 222 1355666666555321 0 0 11122223368888888877 32 23 5777777
Q ss_pred HHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEE
Q 040324 171 YVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVV 245 (488)
Q Consensus 171 s~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi 245 (488)
+.. ...++.+++.+||.|+++.|+|+.+...+...|.++..++.+ +++++++.++.. .+..+.++
T Consensus 101 ~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~---------~~~~~~v~- 170 (405)
T PRK09148 101 SKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHS---------IPKPIALI- 170 (405)
T ss_pred hHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhc---------cccceEEE-
Confidence 664 467788888999999999999999988888899999888753 445666665532 12244444
Q ss_pred EcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCC-CCCccEEEcccccccCCcc---c
Q 040324 246 VEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVD-TSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 246 ~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~-p~~~di~~~t~sK~~g~~G---g 318 (488)
.....+++|.+.+ +++|.++|++||+++|+||+|....++ +........++ ..+..++++||||.+|.+| |
T Consensus 171 l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~--~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G 248 (405)
T PRK09148 171 VNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFD--GNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMG 248 (405)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcC--CCCCCChhhCCCccCcEEEEeccccccCCcchhee
Confidence 4455788998887 578999999999999999999843332 21111111121 1234577899999999888 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+.........+ .+++...++.+.|+. ..++.++.++.++++.+.+.+.|++.|+.+..+.++
T Consensus 249 ~~v~~~~~i~~l~~~~~~~~~~--~~~~~q~~~~~~L~~-----~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g 321 (405)
T PRK09148 249 FAVGNERLIAALTRVKSYLDYG--AFTPIQVAATAALNG-----PQDCIAEMRELYKKRRDVLVESFGRAGWDIPPPAAS 321 (405)
T ss_pred eeeCCHHHHHHHHHHHHHhccC--CChHHHHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCee
Confidence 9999999999887654322223 455555555555531 123567788889999999999999988876666677
Q ss_pred CeEEEEeCCc---chHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 399 PVMPIMVYNP---AKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 399 ~~~~~~~~~~---~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
.++++.+... ....++++.|+ ++||.+.+... +...+.+++||++. .+++++++++++|.++++.++.
T Consensus 322 ~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~-f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 322 MFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVG-FGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred EEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchh-hCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Confidence 7778776542 13467888877 56999997321 12223579999984 6899999999999999887654
No 162
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-24 Score=219.28 Aligned_cols=291 Identities=16% Similarity=0.174 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHhC----C---CCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC-----
Q 040324 148 HNELEECVARFVG----K---PAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH----- 214 (488)
Q Consensus 148 ~~~l~~~la~~~g----~---~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~----- 214 (488)
..+|++.+|+++. . ++.+++++|+.. ...++.+++++|+.|+++.|+|+.+...++..|++++.++.
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 147 (384)
T PRK06348 68 DVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDG 147 (384)
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcC
Confidence 3678888888873 1 345666666554 56778888999999999999999999999999998888763
Q ss_pred --CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCC
Q 040324 215 --NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 215 --~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~ 289 (488)
-|++++++.+++ ..++++++ ...+++|.+.+ +++|.++|++||++||+||+|....++....
T Consensus 148 ~~~d~~~l~~~~~~------------~~~~v~l~-~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 214 (384)
T PRK06348 148 FQINVKKLEALITS------------KTKAIILN-SPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV 214 (384)
T ss_pred CcCCHHHHHHhhCc------------CccEEEEe-CCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCcc
Confidence 157777776643 14555555 66888898775 8889999999999999999998443332111
Q ss_pred CcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCch
Q 040324 290 GVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCR 366 (488)
Q Consensus 290 ~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~ 366 (488)
......+. .+..++++||||++|.+| ||+++++++++.+........++ .+++...++..+|... .+.
T Consensus 215 ~~~~~~~~--~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~~-----~~~ 285 (384)
T PRK06348 215 PMATLAGM--PERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFS--APTISQRAAIYALKHR-----DTI 285 (384)
T ss_pred chhhcCCC--cCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCC--CCHHHHHHHHHHHhCc-----HHH
Confidence 11122111 345688999999999777 99999999998887655433343 6666666666665421 224
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCC-cchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEe
Q 040324 367 GAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYN-PAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARIC 443 (488)
Q Consensus 367 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~ 443 (488)
.+++++.++++.+++.+.|++. ++.+..+.++.++|+.+.. .....++++.|++ +||.+.+.. .+...+.+++||+
T Consensus 286 ~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~-~f~~~~~~~iRi~ 364 (384)
T PRK06348 286 VPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGK-AFGESGEGYIRLA 364 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCch-hhccCCCCeEEEE
Confidence 5677888888899999999886 5666666566667777753 3456789998875 599999732 1223345799999
Q ss_pred ecCCCCHHHHHHHHHHHHHH
Q 040324 444 ISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 444 ~~~~~t~edid~~l~~l~~~ 463 (488)
++ .+++++++++++|.+.
T Consensus 365 ~~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 365 CT--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred ec--CCHHHHHHHHHHHHhh
Confidence 84 6899999999988653
No 163
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.8e-24 Score=218.24 Aligned_cols=333 Identities=14% Similarity=0.136 Sum_probs=230.0
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~ 176 (488)
+.++|+|+.+.. .+ ..++.+.+++.+++...... .++......++++.+|++++.+ ++++++++++++..
T Consensus 27 ~~~~i~l~~~~~-~~-~~~~~~~~a~~~~~~~~~~~------~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~ 98 (380)
T PRK06225 27 DKEMIWMGQNTN-HL-GPHEEVREAMIRCIEEGEYC------KYPPPEGFPELRELILKDLGLDDDEALITAGATESLYL 98 (380)
T ss_pred cCCeEEccCCCC-CC-CCCHHHHHHHHHHHhcCCCC------CCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHH
Confidence 456888874322 12 23577888888877642111 1122334578999999999864 45666666667777
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG 248 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~--------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~ 248 (488)
++.+++++|+.|+++.|.|..+...+...|++++.++.. |++++++.+.+ ..++++++ .
T Consensus 99 ~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~------------~~~~v~l~-~ 165 (380)
T PRK06225 99 VMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE------------NTRLIYLI-D 165 (380)
T ss_pred HHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC------------CceEEEEe-C
Confidence 888888999999999999998877788889998887631 56667665542 24555556 4
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEe
Q 040324 249 IYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAG 322 (488)
Q Consensus 249 v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~ 322 (488)
..+++|.+.+ +++|+++|+++|+++|+||+|. .|.. +.... ..+++ +..+++.||||.+|.+| ||+++
T Consensus 166 p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~-~~~~~--~~~~~-~~~i~~~s~SK~~g~~G~RiG~i~~ 239 (380)
T PRK06225 166 PLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR--DFAR-EHTLA--AEYAP-EHTVTSYSFSKIFGMAGLRIGAVVA 239 (380)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH--HHhc-cCCch--hhcCC-CCEEEEeechhhcCCccceeEEEec
Confidence 4667887664 9999999999999999999997 4432 11111 12232 34688889999998777 99999
Q ss_pred CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee-cCCCCCCe
Q 040324 323 SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEV-LGDNDSPV 400 (488)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~-~~~~~~~~ 400 (488)
++++++.++.... ..++ .+.+.++++.++|+.. .+..++..+.++++.+.+.+.|+++ |+.+ ..+..+.+
T Consensus 240 ~~~l~~~~~~~~~-~~~~--~~~~~~~~a~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~ 311 (380)
T PRK06225 240 TPDLIEVVKSIVI-NDLG--TNVIAQEAAIAGLKVK-----DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNM 311 (380)
T ss_pred CHHHHHHHHHHHh-cccC--CCHHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeE
Confidence 9999988876532 1233 5666666666666532 1234555666677788888888874 5432 22345667
Q ss_pred EEEEeCC-cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 401 MPIMVYN-PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 401 ~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+++.+.. .....++.+.|.++||.+.+..+.....+.+++|++++ .++|++++++++|++++++++
T Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 312 MVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLR 378 (380)
T ss_pred EEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 7777643 24567899999999999987322222234579999984 589999999999999998764
No 164
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.94 E-value=1.1e-24 Score=223.27 Aligned_cols=295 Identities=13% Similarity=0.132 Sum_probs=219.2
Q ss_pred ChhhHHHHHHHHHHHhCC----CCeEEeCCcHHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC---
Q 040324 144 TLALHNELEECVARFVGK----PAAIVFGMGYVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--- 215 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~----~~~i~~~sGs~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~--- 215 (488)
......+|++.++++++. ++.+++++|+... ..++.+++.+||.|+++.|+|+.+...++..|++++.++.+
T Consensus 119 ~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g 198 (431)
T PRK15481 119 DAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG 198 (431)
T ss_pred CcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC
Confidence 333346899999998763 3467777776654 67888889999999999999999999999999999998764
Q ss_pred -CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCCh---HHHHHHHHHc-CcEEEEEccccccccCCCCCC
Q 040324 216 -TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKL---PEIITICKRY-KAYTYLDEAHSIGAVGKTGRG 290 (488)
Q Consensus 216 -d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l---~~l~~l~~~~-g~~li~DE~~s~g~~g~~g~~ 290 (488)
|+++|+++++. ..++++++...++++|.+.+. ++|.++|++| +++||+||+|. .+...+..
T Consensus 199 ~~~~~l~~~~~~------------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~--~~~~~~~~ 264 (431)
T PRK15481 199 MQPEKLERALAQ------------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFA--LLSSSPYH 264 (431)
T ss_pred CCHHHHHHHHhc------------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchh--hhccCCCC
Confidence 67778777653 245667666889999998875 5999999999 99999999998 44222211
Q ss_pred cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchH
Q 040324 291 VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRG 367 (488)
Q Consensus 291 ~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~ 367 (488)
.....+ .+..|+++||||.+| +| ||+++++++++.+........++ .+.+.+.++.++|+. ....++.
T Consensus 265 --~~~~~~-~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~--~s~~~q~a~~~~l~~---~~~~~~l 335 (431)
T PRK15481 265 --SVIPQT-TQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQW--VSHLLQDLVYACLTD---PEYQARL 335 (431)
T ss_pred --CCCcCC-CCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccC--CCHHHHHHHHHHHhC---ccHHHHH
Confidence 111112 234688999999999 78 99999999998886543322222 566666666666642 1111235
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEee-cCCCccCCCCeEEEeecC
Q 040324 368 AQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTV-GFPATPLLLARARICISA 446 (488)
Q Consensus 368 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-~~~~~~~~~~~iRi~~~~ 446 (488)
++.++.++++.+.+.+.|++.|+.+..+.++.++|+.+.. ...++++.|.++||.+.+. .|. .+...+++||+++
T Consensus 336 ~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~-~~~~~~~iRis~~- 411 (431)
T PRK15481 336 AQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFG-VSAPSHGLRITLS- 411 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCccc-cCCCCCeEEEEcC-
Confidence 6788889999999999999988877667778888887753 3568999999999999972 221 1122468999995
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 040324 447 SHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 447 ~~t~edid~~l~~l~~~~~ 465 (488)
..+++++++++++|.++++
T Consensus 412 ~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 412 TLNDAEINRLAADLHQALN 430 (431)
T ss_pred CCChHHHHHHHHHHHHHhc
Confidence 3679999999999998864
No 165
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.94 E-value=1.9e-24 Score=217.53 Aligned_cols=320 Identities=13% Similarity=0.085 Sum_probs=224.7
Q ss_pred CCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhcccC----CCcE
Q 040324 114 AAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPVLMG----KGSL 187 (488)
Q Consensus 114 ~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~~~----~~~~ 187 (488)
.+++|.+.+++.++++...... ....+.....+++++.+++++|.+ ..+++++|++++..++.++.. +++.
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~ 106 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDP---GLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPN 106 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCc---ccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCce
Confidence 4457888899998887632111 122345566689999999999975 357788899998777665533 5789
Q ss_pred EEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHH
Q 040324 188 IISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEI 262 (488)
Q Consensus 188 Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l 262 (488)
|+++.+.|.++...++..|.+++.++.+ |+++|++.+.+. ++.++++. ..+++|.+.|+++|
T Consensus 107 vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~------------~~~vi~~~-~~~~tG~~~~l~~I 173 (371)
T PRK13520 107 IVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDN------------TIGIVGIA-GTTELGQVDPIPEL 173 (371)
T ss_pred EEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhC------------CEEEEEEc-CCcCCcccCCHHHH
Confidence 9999999999988888889998888753 789999888651 33344443 35678999999999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC--ccc-EEEeCHHHHHHHHhhCCCCcc
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS--YGG-YIAGSKELIQYLKYNCPAHLY 339 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~--~Gg-~i~~~~~~~~~~~~~~~~~~~ 339 (488)
.++|+++|+++++||+|+.+..+..... ..+++...++|.+..+.+|...+ ++| +++.++++++.+.... .+..
T Consensus 174 ~~l~~~~g~~livD~a~~~~~~~~~~~~--~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~-~~~~ 250 (371)
T PRK13520 174 SKIALENGIFLHVDAAFGGFVIPFLDDP--PNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDT-PYLT 250 (371)
T ss_pred HHHHHHcCCCEEEEecchhHHHHhhcCC--CCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccC-cccc
Confidence 9999999999999999985443211111 01222224568887788896542 224 4456777777664221 1111
Q ss_pred -------cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHH
Q 040324 340 -------ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVS 412 (488)
Q Consensus 340 -------~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (488)
..+.++..++++.++|+.+. .+..+++.++..++.+++++.|+++|+++...+..+++.+.+. ...
T Consensus 251 ~~~~~~~~gt~~~~~~~~~~~al~~l~----~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~v~~~~~---~~~ 323 (371)
T PRK13520 251 SKKQATLTGTRSGAGVAATYAVMKYLG----REGYRKVVERCMENTRWLAEELKERGFEPVIEPVLNIVAFDDP---NPD 323 (371)
T ss_pred CCCCcceEeeccChHHHHHHHHHhhhc----HhHHHHHHHHHHHHHHHHHHHHHhCCCEEecCCCceEEEEecC---CHH
Confidence 11123445677778887762 2245678899999999999999999987333334555555443 466
Q ss_pred HHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 413 SFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 413 ~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
++.++|.++||.+.... ..+++|++++..+|++|+++++++|+++++
T Consensus 324 ~v~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 324 EVREKLRERGWRVSVTR------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 89999999999887422 136799999888999999999999998764
No 166
>PRK10534 L-threonine aldolase; Provisional
Probab=99.94 E-value=2e-25 Score=221.21 Aligned_cols=319 Identities=16% Similarity=0.154 Sum_probs=211.7
Q ss_pred EEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc
Q 040324 103 LNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM 182 (488)
Q Consensus 103 ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~ 182 (488)
|||+||..-+ + +|.+.+++.++.... ..++..+...+|++++|+++|.+.++++++|++++...+.+++
T Consensus 2 ~~~~~~~~~~-p--~~~~~~a~~~~~~~~--------~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 2 IDLRSDTVTR-P--SRAMLEAMMAAPVGD--------DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred cccccccCCC-C--CHHHHHHHHhccCCC--------cccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhc
Confidence 7888775544 3 477777776543321 1234567779999999999999888999999999877777778
Q ss_pred CCCcEEEEeCCCchHHHHH--HHhcC-CeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 183 GKGSLIISDSLNHNSIVNG--ARGSG-ATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 183 ~~~~~Vl~~~~~h~~~~~~--~~~~g-~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
.+|+.|+++.++|...... ....+ ..++.++.+ |+++|++.+.+... +...++++++ ++. ++|
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~------~~~~~~lv~l-~np--~~G 141 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDI------HFARTRLLSL-ENT--HNG 141 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCc------CcccceEEEE-ecC--CCC
Confidence 8999999988888653321 23333 566666533 67888776643100 0001344444 433 358
Q ss_pred CCCCh---HHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc-ccEEEeCHHHHHHH
Q 040324 255 ELCKL---PEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-GGYIAGSKELIQYL 330 (488)
Q Consensus 255 ~~~~l---~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-Gg~i~~~~~~~~~~ 330 (488)
.+.+. ++|.++|++|+++|++||+|.++.....+....... ...|.++.||||++|.+ |||+++++++++.+
T Consensus 142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~----~~~~~~~~s~SK~~~~~~G~~~~~~~~~i~~~ 217 (333)
T PRK10534 142 KVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT----QYCDSFTICLSKGLGTPVGSLLVGNRDYIKRA 217 (333)
T ss_pred eecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH----hcCCEEEEEeEcCCCCcccceEEcCHHHHHHH
Confidence 88775 556678999999999999987433221122111111 11244455999999874 45788999999988
Q ss_pred HhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcch
Q 040324 331 KYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAK 410 (488)
Q Consensus 331 ~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 410 (488)
+.....+..+.+.+.+.++++.++|+.. .+.+++..++++++.+.|++.|+++..+ .++++++.+.. ..
T Consensus 218 ~~~~~~~~~~~~~~~~~~a~~~~~l~~~---------~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~~nfv~~~~~~-~~ 286 (333)
T PRK10534 218 RRWRKMTGGGMRQAGILAAAGLYALKHN---------VARLQEDHDNAAWLAEQLREAGADVMRQ-DTNMLFVRVGE-EQ 286 (333)
T ss_pred HHHHHHhCCchhhHHHHHHHHHHHHHhh---------HHHHHHHHHHHHHHHHHHHhCCCccCCC-CceEEEEECCc-hh
Confidence 7654422222123334555566666531 2344445556789999999999987655 57777776653 24
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
..++.+.|+++||.+.+. ..+|++.+..+|+|++++++++|++++.
T Consensus 287 ~~~~~~~l~~~gi~v~~~---------~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 287 AAALGEYMRERNVLINAS---------PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred HHHHHHHHHHcCeeecCC---------ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 567888899999999741 2589988778999999999999987653
No 167
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=1.8e-24 Score=220.81 Aligned_cols=335 Identities=17% Similarity=0.212 Sum_probs=224.3
Q ss_pred ceeEEeccc-cccCCCCCCccchHHHHHHH-HHcCCCCCCcccCCCChhhHHHHHH----HHHHHhCCCCe-EEeCCcHH
Q 040324 100 SRCLNLGSY-NYLGFAAADEYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNELEE----CVARFVGKPAA-IVFGMGYV 172 (488)
Q Consensus 100 ~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~~----~la~~~g~~~~-i~~~sGs~ 172 (488)
+.+|++.++ |+ .+|.+.+++.+.+ ..++.+..+++...|. +...++++ .+++++|.+.. +++++|++
T Consensus 25 ~~~~~l~~~~n~-----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~ 98 (416)
T PRK00011 25 EEHIELIASENF-----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EYVDVVEQLAIDRAKELFGAEYANVQPHSGSQ 98 (416)
T ss_pred hcCeeeecccCc-----CCHHHHHHHhchhhcccccCCCCccccccc-hHHHHHHHHHHHHHHHHhCCCceeeecCCchH
Confidence 567888543 44 2578888887765 3455555555544442 33444544 88999998765 66789999
Q ss_pred HHhhhhhcccCCCcEEEEeCCCchHHHHH---H--HhcCCeEEEeeC------CCHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 173 TNSSILPVLMGKGSLIISDSLNHNSIVNG---A--RGSGATIRVFQH------NTPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 173 a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~---~--~~~g~~v~~~~~------~d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
++..++.++.++||.|+++.+.|+++... . ...|.+++.++. .|++++++.+++. .++
T Consensus 99 al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~-----------~~k 167 (416)
T PRK00011 99 ANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEH-----------KPK 167 (416)
T ss_pred HHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhc-----------CCC
Confidence 99888888899999999999999764321 1 222456666553 2788998888641 145
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC-CcccEE
Q 040324 242 IMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-SYGGYI 320 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-~~Gg~i 320 (488)
+++++++.+ |...++++|.++|++||+++|+|++|+.|..+. |. .. ..+. .+|++++|++|+++ ..||++
T Consensus 168 ~v~~~~~~~---~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~-g~-~~--~~~~--~~di~~~S~~K~l~g~~gg~i 238 (416)
T PRK00011 168 LIIAGASAY---SRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA-GV-HP--SPVP--HADVVTTTTHKTLRGPRGGLI 238 (416)
T ss_pred EEEECCCcC---CCccCHHHHHHHHHHcCCEEEEECcchhccccc-Cc-cC--CCCC--CCcEEEecCCcCCCCCCceEE
Confidence 555545544 455689999999999999999999998554432 11 00 1111 45899999999994 457899
Q ss_pred EeC-HHHHHHHHhhCCCCcccCCCCHHHHHH-HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC-CCC
Q 040324 321 AGS-KELIQYLKYNCPAHLYATSISPPAAEQ-IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG-DND 397 (488)
Q Consensus 321 ~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa-~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~ 397 (488)
+++ +++.+.++.....+.+++. .....++ ..+.++.+. +..++..++++++++++++.|++.|+++.. ...
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~-~~~~~aa~~~a~~~~~~-----~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 312 (416)
T PRK00011 239 LTNDEELAKKINSAVFPGIQGGP-LMHVIAAKAVAFKEALE-----PEFKEYAQQVVKNAKALAEALAERGFRVVSGGTD 312 (416)
T ss_pred EeCCHHHHHHHHHHhCccccCCc-cHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHHhCCCeeeecCCC
Confidence 885 7888888765544333322 2323333 333334331 134778899999999999999999987653 123
Q ss_pred CCeEEEEeCCcc-hHHHHHHHHHHCCceEEeecCC---CccCCCCeEEEeecC----CCCHHHHHHHHHHHHHHHHH
Q 040324 398 SPVMPIMVYNPA-KVSSFSRECLKQNVAIVTVGFP---ATPLLLARARICISA----SHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 398 ~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~~~~~---~~~~~~~~iRi~~~~----~~t~edid~~l~~l~~~~~~ 466 (488)
++++++.+.... ...++.+.|.++||.+.....| ..+.....+|++... .+|++|+++++++|++++..
T Consensus 313 ~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 313 NHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 477777764332 4567888888899998742212 122334569986422 57899999999999998664
No 168
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3e-24 Score=214.53 Aligned_cols=319 Identities=15% Similarity=0.156 Sum_probs=226.9
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHH-Hhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVT-NSS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a-~~~ 176 (488)
++..|||+++.. .++ .++.+.+++.+.+......+ .. ....+|++.+|++++.+ +.+++++|+.. ...
T Consensus 23 ~~~~i~l~~~~~-~~~-~~~~~~~a~~~~~~~~~~~y-------~~-~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~ 92 (353)
T PRK05387 23 LAKLIKLNTNEN-PYP-PSPKVLEAIRAALGDDLRLY-------PD-PNADALRQAIAAYYGLDPEQVFVGNGSDEVLAH 92 (353)
T ss_pred ccceeeccCCCC-CCC-CCHHHHHHHHHHhhhhhhcC-------CC-CcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHH
Confidence 356789875432 122 24677778877665421122 11 12379999999999864 45677776665 467
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS 251 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s 251 (488)
++.+++.+||.|+++.|+|+.+...++..|.++..++.. |++++++ . .+.+ ++...++
T Consensus 93 ~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~-------------~~~v-~~~~P~N 155 (353)
T PRK05387 93 AFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR---P-------------NGGI-IFPNPNA 155 (353)
T ss_pred HHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh---c-------------CCEE-EEeCCCC
Confidence 788888999999999999998888888899998888753 4455431 1 3344 4445589
Q ss_pred CCCCCCChHHHHHHHHHc-CcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHH
Q 040324 252 MEGELCKLPEIITICKRY-KAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELI 327 (488)
Q Consensus 252 ~~G~~~~l~~l~~l~~~~-g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~ 327 (488)
++|.+.+.+++.++++++ ++++|+||+|. .|+. ........ ..+.+++++||||.+|.+| ||++++++++
T Consensus 156 PtG~~~~~~~~~~l~~~~~~~~livDe~y~--~~~~--~~~~~~~~--~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~ 229 (353)
T PRK05387 156 PTGIALPLAEIERILAANPDSVVVIDEAYV--DFGG--ESAIPLID--RYPNLLVVQTFSKSRSLAGLRVGFAIGHPELI 229 (353)
T ss_pred CCCCCCCHHHHHHHHHhCCCcEEEEeCccc--ccCC--cchHHHHh--hCCCEEEEEehhHhhcchhhhceeeecCHHHH
Confidence 999999999999999886 99999999997 5542 11112222 2334789999999999888 9999999999
Q ss_pred HHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC
Q 040324 328 QYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN 407 (488)
Q Consensus 328 ~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 407 (488)
+.+....... ...+.+.+.+.++.++|+.- +..++.+++++++.+++.+.|++.|+.+. +.++.++++.+.
T Consensus 230 ~~l~~~~~~~-~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~- 300 (353)
T PRK05387 230 EALNRVKNSF-NSYPLDRLAQAGAIAAIEDE------AYFEETRAKVIATRERLVEELEALGFEVL-PSKANFVFARHP- 300 (353)
T ss_pred HHHHHhhccC-CCCCcCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHHCCCeEC-CCcCcEEEEECC-
Confidence 9887654322 12235666666666665421 14567788889999999999999998765 445666666654
Q ss_pred cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 408 PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.....++++.|.++||.+..++. +...+++||+++ +.+++++++++|++++.
T Consensus 301 ~~~~~~~~~~l~~~gi~v~~~~~---~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 301 SHDAAELAAKLRERGIIVRHFNK---PRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred CCCHHHHHHHHHHCCEEEEECCC---CCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 34567899999999999975332 223579999984 78999999999998764
No 169
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.94 E-value=5e-24 Score=220.82 Aligned_cols=335 Identities=15% Similarity=0.123 Sum_probs=222.3
Q ss_pred cchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCCcHHH-Hhhhhhccc-CCCcEEE
Q 040324 119 YCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGMGYVT-NSSILPVLM-GKGSLII 189 (488)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sGs~a-~~~~~~~~~-~~~~~Vl 189 (488)
.+.+++.+.++..+... ..|+......+|++.+|++++. ++.|++++|+.. ...++.++. ++||.|+
T Consensus 92 ~~~~~~~~~~~~~~~~~----~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vl 167 (481)
T PTZ00377 92 DVVARAKEYLNAIGGGT----GAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVM 167 (481)
T ss_pred HHHHHHHHHHHhCCCcc----cCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEE
Confidence 55666666555532111 1223333457899999998752 356777777665 466777777 7999999
Q ss_pred EeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---h
Q 040324 190 SDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---L 259 (488)
Q Consensus 190 ~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l 259 (488)
++.|+|+.+...++..|++++.++.+ |+++|++.+.+...++ ...++++++ ...+++|.+.+ +
T Consensus 168 v~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~------~~~k~l~l~-~P~NPTG~~~s~e~~ 240 (481)
T PTZ00377 168 IPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNG------ITPRALVVI-NPGNPTGQVLTRDVM 240 (481)
T ss_pred ECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcC------CCeeEEEEE-CCCCCCCcCCCHHHH
Confidence 99999999999999999999888742 6788988886532211 124556666 56889998887 8
Q ss_pred HHHHHHHHHcCcEEEEEccccccccCCCCCCc---chh-cCCCCC----CccEEEccccccc-CCcc---cEEEe---CH
Q 040324 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRGV---CEL-LGVDTS----DVDIMMGTFSKSF-GSYG---GYIAG---SK 324 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~---~~~-~~v~p~----~~di~~~t~sK~~-g~~G---g~i~~---~~ 324 (488)
++|+++|++||+++|+||+|....+. .+... ... .++.++ ...|+++||||++ +.+| ||+++ ++
T Consensus 241 ~~i~~~a~~~~~~iI~De~Y~~l~~~-~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~ 319 (481)
T PTZ00377 241 EEIIKFCYEKGIVLMADEVYQENIYD-GEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPP 319 (481)
T ss_pred HHHHHHHHHCCCEEEEehhhHhhccC-CCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCH
Confidence 99999999999999999999843331 11111 111 122221 1347889999985 7677 99986 89
Q ss_pred HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCC
Q 040324 325 ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGED-----GSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDS 398 (488)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~-----~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 398 (488)
++++.+...... .. +.+++.+.++.++|+...... ...+..+..++++++.+.+.+.|+++ |+.+..+.++
T Consensus 320 ~li~~l~~~~~~-~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg 396 (481)
T PTZ00377 320 EVREQIYKLASI-NL--CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGA 396 (481)
T ss_pred HHHHHHHHHhhe-ec--CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCee
Confidence 999988765431 22 256666666666653110000 00122344455788889999999887 7888777677
Q ss_pred CeEEEEeCCcc------------hHHHHHHHHH-HCCceEEeec-CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 399 PVMPIMVYNPA------------KVSSFSRECL-KQNVAIVTVG-FPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 399 ~~~~~~~~~~~------------~~~~~~~~l~-~~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
.++++.+..+. ....++..++ ++||.++|.. |. ...+.+++|+++. .+++++++++++|.+++
T Consensus 397 ~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~-~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~ 473 (481)
T PTZ00377 397 MYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG-QKPGTYHFRITIL--PPEEQIEEMVKKIKEFH 473 (481)
T ss_pred EEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC-CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHH
Confidence 77665543221 1234555555 5599999732 22 1124579999984 77899999999999999
Q ss_pred HHhCCcc
Q 040324 465 DLVGIKY 471 (488)
Q Consensus 465 ~~~~~~~ 471 (488)
+++..||
T Consensus 474 ~~~~~~~ 480 (481)
T PTZ00377 474 ESFMKKY 480 (481)
T ss_pred HHHHHhh
Confidence 8876665
No 170
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.94 E-value=4.3e-25 Score=224.35 Aligned_cols=314 Identities=17% Similarity=0.138 Sum_probs=210.4
Q ss_pred CCCCCccchHHHHHHHHHcCCCCCCccc--CCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHH-hhhhhcccCC--C
Q 040324 113 FAAADEYCTPRVIDSLKKYSHSTCSSRV--DGGTLALHNELEECVARFVGKP--AAIVFGMGYVTN-SSILPVLMGK--G 185 (488)
Q Consensus 113 ~~~~~~~v~~a~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~-~~~~~~~~~~--~ 185 (488)
.++++|.+++++.+++ .....+..... ..|..+..+++++.+++++|.+ .++++++|++++ ..+..+...+ +
T Consensus 30 ~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~g 108 (398)
T cd00613 30 YKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKR 108 (398)
T ss_pred cCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCC
Confidence 4566788887776666 22112221100 2356677789999999999876 566666666554 3444444444 9
Q ss_pred cEEEEeCCCchHHHHHHHhcC----CeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 186 SLIISDSLNHNSIVNGARGSG----ATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~~~~g----~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
+.|+++.++|+++...+...+ ++++.++.+ |++++++.+.+ ++.+|+++++. ++|.+
T Consensus 109 d~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-------------~t~~viv~~~~-~~G~~ 174 (398)
T cd00613 109 NKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSE-------------EVAALMVQYPN-TLGVF 174 (398)
T ss_pred CEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCC-------------CeEEEEEECCC-CCcee
Confidence 999999999999998888777 888888764 56777766642 34455555554 67888
Q ss_pred CC-hHHHHHHHHHcCcEEEEEccccccc-cCCCCCCcchhcCCCCCCccEEEcccccccC-----Ccc-cEEEeCHHHHH
Q 040324 257 CK-LPEIITICKRYKAYTYLDEAHSIGA-VGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-----SYG-GYIAGSKELIQ 328 (488)
Q Consensus 257 ~~-l~~l~~l~~~~g~~li~DE~~s~g~-~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-----~~G-g~i~~~~~~~~ 328 (488)
.+ +++|+++|++||+++|+|++|+.+. .++.+ ..++|++++|++|+++ +++ |+++.++++++
T Consensus 175 ~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~----------~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~ 244 (398)
T cd00613 175 EDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG----------EYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVR 244 (398)
T ss_pred cchHHHHHHHHHhcCCEEEEEeccccccCCCChH----------HcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHh
Confidence 87 5999999999999999999987432 11111 1235899999999982 123 88888888877
Q ss_pred HHHhhC---------------------------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHH
Q 040324 329 YLKYNC---------------------------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFF 381 (488)
Q Consensus 329 ~~~~~~---------------------------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (488)
.+.... .+..+..+.++..++++.++++.+. .+..+++.++++++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~----~~g~~~~~~~~~~~~~~l 320 (398)
T cd00613 245 FLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG----PEGLKEIAERAHLNANYL 320 (398)
T ss_pred hCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHH
Confidence 642110 0001112245666666666666652 224567889999999999
Q ss_pred HHHHHhCCCeecCCCCC--CeEEEEeCC--cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHH
Q 040324 382 RSKLQKMGFEVLGDNDS--PVMPIMVYN--PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 382 ~~~L~~~g~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l 457 (488)
+++|++++.... ..+. ..+.+.+.. .....++++.|+++||.+.... +.+.+.+|++|+..+|+||||+++
T Consensus 321 ~~~L~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~----~~~~~~lRis~~~~~t~edid~~~ 395 (398)
T cd00613 321 AKRLKEVGGVLP-FNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMY----LPVDGTLMIEPTETETKEELDALL 395 (398)
T ss_pred HHHHHhcCCccc-CCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccc----cCCCCeEEEEcCCCCCHHHHHHHH
Confidence 999999865431 2111 223333332 2356789999999999875321 233478999999999999999999
Q ss_pred HHH
Q 040324 458 EVI 460 (488)
Q Consensus 458 ~~l 460 (488)
++|
T Consensus 396 ~~L 398 (398)
T cd00613 396 EAL 398 (398)
T ss_pred HhC
Confidence 864
No 171
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=2.6e-24 Score=219.47 Aligned_cols=337 Identities=15% Similarity=0.114 Sum_probs=226.6
Q ss_pred cceeEEeccccccCCC--CCCccchHHHHHHHHHcCC-CCCCcccCCCChhhHHHHHHHHHHHhCC--------CCeEEe
Q 040324 99 VSRCLNLGSYNYLGFA--AADEYCTPRVIDSLKKYSH-STCSSRVDGGTLALHNELEECVARFVGK--------PAAIVF 167 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~--~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~ 167 (488)
|+.+|+++..++--++ ..++.+.+++.++++.... .+ +......++++.+|++++. ++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y-------~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it 123 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSY-------STCVGLLPARRAIAEYLSRDLPYELSTDDIYLT 123 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCC-------CCCccCHHHHHHHHHHHhhccCCCCChhhEEEe
Confidence 6788998744332111 1246677888877765211 22 1222337899999998853 234444
Q ss_pred CCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 168 GMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 168 ~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
++++++...++.++.++||.|+++.|+|+.+...+...|..++.++.. |++++++.+.+ .+
T Consensus 124 ~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~ 191 (430)
T PLN00145 124 AGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE------------NT 191 (430)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc------------Cc
Confidence 445566677888888999999999999999888888889998887631 67888776653 24
Q ss_pred eEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc
Q 040324 241 KIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
++++++.| .+++|.+.+ +++|+++|+++|+++|+||+|....++ +........+...+..|+++||||.++.+|
T Consensus 192 ~~i~i~~P-~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG 268 (430)
T PLN00145 192 VAMVIINP-NNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFG--SKPFVPMGVFGEVAPVLTLGSISKRWVVPG 268 (430)
T ss_pred eEEEEeCC-CCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccC--CCCccchhhhcccCcEEEEeccccccCCCC
Confidence 55555554 788998887 889999999999999999999843332 222111111222334688999999999988
Q ss_pred ---cEEEe--CHHHHH------HHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH
Q 040324 318 ---GYIAG--SKELIQ------YLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ 386 (488)
Q Consensus 318 ---g~i~~--~~~~~~------~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (488)
||+++ ++.+++ .+..... ...+.+.+.++++...|+.- ..+..++.++.++++.+.+.+.|+
T Consensus 269 ~RlG~iv~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Q~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~L~ 341 (430)
T PLN00145 269 WRLGWIATCDPNGILKETKVVDSIRNYLN---ISTDPATFVQGAIPQIIANT----KEEFFTKTLGLLKETADICYEKIK 341 (430)
T ss_pred eeEEEEEEecchhhhhhhHHHHHHHHHhc---ccCCCCHHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99986 344433 3333221 12124455555555555420 123567788889999999999998
Q ss_pred hC-CCee-cCCCCCCeEEEEeCCc-----chHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHH
Q 040324 387 KM-GFEV-LGDNDSPVMPIMVYNP-----AKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALE 458 (488)
Q Consensus 387 ~~-g~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (488)
+. |+.+ ..+.++.++++.+... ....+++.+|+++ ||.+.|... +. ..+++||++. .+.++++++++
T Consensus 342 ~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~-fg--~~~~lRis~~--~~~~~l~~al~ 416 (430)
T PLN00145 342 EIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSA-LG--MKNWLRITFA--IDPPSLEDGLE 416 (430)
T ss_pred cCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccc-cC--CCCeEEEEeC--CCHHHHHHHHH
Confidence 87 6654 3466677777766421 1355788777655 999987321 22 2479999985 58999999999
Q ss_pred HHHHHHHHhCC
Q 040324 459 VISRIGDLVGI 469 (488)
Q Consensus 459 ~l~~~~~~~~~ 469 (488)
+|.+++++...
T Consensus 417 rl~~~~~~~~~ 427 (430)
T PLN00145 417 RLKSFCLRHAK 427 (430)
T ss_pred HHHHHHHHhcc
Confidence 99999987753
No 172
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.94 E-value=4.6e-24 Score=216.35 Aligned_cols=331 Identities=17% Similarity=0.159 Sum_probs=225.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CCC-----CeEEeCC
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GKP-----AAIVFGM 169 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~~-----~~i~~~s 169 (488)
|++++||+.+.. .++ .++.+.+++.+.+... ..+ +......+|++.+|+++ |.+ +.+++++
T Consensus 28 ~~~~i~l~~~~p-~~~-~~~~~~~~~~~~~~~~-~~Y-------~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~ 97 (396)
T PRK09147 28 DLPPISLSIGEP-KHP-TPAFIKDALAANLDGL-ASY-------PTTAGLPALREAIAAWLERRYGLPALDPATQVLPVN 97 (396)
T ss_pred CCCeEecCCCCC-CCC-CCHHHHHHHHHHhhhh-cCC-------CCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECC
Confidence 788999874332 122 2355666666655432 112 12222367888888765 522 3677777
Q ss_pred cHHH-HhhhhhcccCC---CcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCC
Q 040324 170 GYVT-NSSILPVLMGK---GSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRP 238 (488)
Q Consensus 170 Gs~a-~~~~~~~~~~~---~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~ 238 (488)
|+.. ...++.+++++ ++.|+++.|+|..+...++..|.+++.++.+ |++++++.+.+
T Consensus 98 G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~------------ 165 (396)
T PRK09147 98 GSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWA------------ 165 (396)
T ss_pred ChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhh------------
Confidence 7664 46778888888 8999999999999998899999999988753 56777665543
Q ss_pred CceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCc--ch---hcCCCCCCccEEEcccc
Q 040324 239 WKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGV--CE---LLGVDTSDVDIMMGTFS 310 (488)
Q Consensus 239 ~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~--~~---~~~v~p~~~di~~~t~s 310 (488)
+.++++++ ...+++|.+.+ +++|+++|++|+++||+||+|....+....... .. ..+.+..+..|+++|||
T Consensus 166 ~~k~i~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 244 (396)
T PRK09147 166 RTQLLFVC-SPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (396)
T ss_pred ccEEEEEc-CCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccc
Confidence 24556655 66888998774 888999999999999999999843332210111 10 01111123568999999
Q ss_pred cccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 040324 311 KSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK 387 (488)
Q Consensus 311 K~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (488)
|.+|.+| ||+++++++++.+....... +.+.++..++++.+.+.. .+...+.++.++++.+.+.+.|++
T Consensus 245 K~~~~~GlRiG~~~~~~~l~~~~~~~~~~~--~~~~~~~~q~a~~~~~~~------~~~~~~~~~~~~~~~~~~~~~L~~ 316 (396)
T PRK09147 245 KRSNVPGLRSGFVAGDAALLKKFLLYRTYH--GCAMPPAVQAASIAAWND------EAHVRENRALYREKFDAVTPILAP 316 (396)
T ss_pred cccCCccceeeeecCCHHHHHHHHHHhhhc--ccCCCHHHHHHHHHHhcc------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888 99999999998887544322 223666666665555521 124567788888888889888887
Q ss_pred CCCeecCCCCCCeEEEEeCCcchHHHHHHHHH-HCCceEEeecCCC-----ccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 388 MGFEVLGDNDSPVMPIMVYNPAKVSSFSRECL-KQNVAIVTVGFPA-----TPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~-----~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
. +.+..+.++.++|+.+. ....++++.|+ ++||.+.+..... ...+.+++||+++ .+++++++++++|.
T Consensus 317 ~-~~~~~p~~g~f~~~~~~--~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~--~~~~~l~~~l~rl~ 391 (396)
T PRK09147 317 V-LDVQLPDAGFYLWAKVP--GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVEAAERIV 391 (396)
T ss_pred h-cCCCCCCeeEEEEEECC--CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 5 55555667788888775 34567888887 4699999733211 1233579999984 57899999999998
Q ss_pred HHHH
Q 040324 462 RIGD 465 (488)
Q Consensus 462 ~~~~ 465 (488)
++++
T Consensus 392 ~~~~ 395 (396)
T PRK09147 392 DFCR 395 (396)
T ss_pred HHhc
Confidence 8763
No 173
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.7e-24 Score=214.67 Aligned_cols=318 Identities=17% Similarity=0.144 Sum_probs=226.1
Q ss_pred cceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-h
Q 040324 99 VSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (488)
Q Consensus 99 g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~ 175 (488)
+..+|||+.| |.++ .+|.+.+++.+. ... ..+ . .+...+|++++|++++.+ +.+++++|+... .
T Consensus 51 ~~~~i~l~~n~~p~~---~~~~v~~a~~~~-~~~-~~Y-------p-~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~ 117 (380)
T PLN03026 51 PEDIVKLDANENPYG---PPPEVLEALGNM-KFP-YVY-------P-DPESRRLRAALAEDSGLESENILVGCGADELID 117 (380)
T ss_pred ccceEEccCCCCCCC---CCHHHHHHHHhh-Hhh-ccC-------C-CCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHH
Confidence 4678998754 2322 235555555431 110 111 1 122478999999999864 567788887754 5
Q ss_pred hhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcC
Q 040324 176 SILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIY 250 (488)
Q Consensus 176 ~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~ 250 (488)
.++.++..+|+.|+++.|+|+.+...++..|++++.++.+ |++++++.+... ..+++++ ....
T Consensus 118 ~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----------~~~~v~l-~~P~ 185 (380)
T PLN03026 118 LLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETH-----------KPKLLFL-TSPN 185 (380)
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhcc-----------CCcEEEE-eCCC
Confidence 6667778899999999999998888888889999888753 577777766321 2444444 5789
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHH
Q 040324 251 SMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELI 327 (488)
Q Consensus 251 s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~ 327 (488)
+++|.+.+.+++.++++.. +++|+||+|. .|...+... .. ++..+..++++||||.+|.+| ||++++++++
T Consensus 186 NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~--~~~~~~~~~-~~--~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i 259 (380)
T PLN03026 186 NPDGSIISDDDLLKILELP-ILVVLDEAYI--EFSTQESRM-KW--VKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 259 (380)
T ss_pred CCCCCCCCHHHHHHHHhcC-CEEEEECcch--hhcCCcchH-HH--HHhCCCEEEEecchHhhcCccccceeeecCHHHH
Confidence 9999999999999999865 9999999998 443322211 11 122345788999999999888 9999999999
Q ss_pred HHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC
Q 040324 328 QYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN 407 (488)
Q Consensus 328 ~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 407 (488)
+.+...... ++ .+.+...++.++|+.- +..++.+++++++.+++.+.|++++.....+.++.++++.+..
T Consensus 260 ~~l~~~~~~--~~--~~~~~q~aa~~aL~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~~~f~~~~~~~ 329 (380)
T PLN03026 260 EYLWRAKQP--YN--VSVAAEVAACAALSNP------KYLEDVKNALVEERERLFGLLKEVPFLEPYPSDANFILCRVTS 329 (380)
T ss_pred HHHHHhcCC--CC--CCHHHHHHHHHHhhCH------HHHHHHHHHHHHHHHHHHHHHHHCCCCeECCCCCeEEEEECCC
Confidence 988765543 33 5666666677776421 2456778888999999999999886432345567777777654
Q ss_pred cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 408 PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.....++.+.|+++||.+.+... +...+++||++. +++++++++++|+++
T Consensus 330 ~~~~~~~~~~l~~~gI~v~~~~~---~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 330 GRDAKKLKEDLAKMGVMVRHYNS---KELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred CCCHHHHHHHHHHCCeEEEECCC---CCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 44567899999999999986321 234579999983 788999999998764
No 174
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=9e-24 Score=211.26 Aligned_cols=315 Identities=17% Similarity=0.225 Sum_probs=219.0
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC----CeEEeCCcHHHHhhhhhcccCCCcE-EEEe
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP----AAIVFGMGYVTNSSILPVLMGKGSL-IISD 191 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sGs~a~~~~~~~~~~~~~~-Vl~~ 191 (488)
|-.+.+++.+++... .... .....+..+++++.++++++.+ ..+++++|++++..++..+..+++. |++.
T Consensus 7 p~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~ 81 (355)
T TIGR03301 7 PLSTSATVRDAMLVD-WCHW----DSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLI 81 (355)
T ss_pred CCCCCHHHHHHhhhh-ccCC----CHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEEC
Confidence 345556666666552 1111 0012466789999999999975 2346778999998888887776665 5566
Q ss_pred CCCchH-HHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHH
Q 040324 192 SLNHNS-IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITI 265 (488)
Q Consensus 192 ~~~h~~-~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l 265 (488)
.++|+. +...++..|.+++.++.+ |++++++.+++. + +..+++.....+.+|.+.++++|.++
T Consensus 82 ~~~~~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~----------~-~~~~v~~~~~~~~~G~~~~~~~i~~l 150 (355)
T TIGR03301 82 NGAYGERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAAD----------P-DITHVATVHHETTTGILNPLEAIAKV 150 (355)
T ss_pred CCchhhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhC----------C-CceEEEEEecCCcccchhHHHHHHHH
Confidence 667765 344566778888887743 788888888642 1 22344444566778999999999999
Q ss_pred HHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccccccc-CCcc-cEEEeCHHHHHHHHhhCCCC------
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSF-GSYG-GYIAGSKELIQYLKYNCPAH------ 337 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~-g~~G-g~i~~~~~~~~~~~~~~~~~------ 337 (488)
|++||+++|+|++|++|... +.+...++|++++|++|++ |.+| |++++++++++.+.....++
T Consensus 151 ~~~~~~~livD~~~s~g~~~---------~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (355)
T TIGR03301 151 ARSHGAVLIVDAMSSFGAIP---------IDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYD 221 (355)
T ss_pred HHHcCCEEEEEeccccCCcc---------cchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHH
Confidence 99999999999999865432 2232345689999999997 4566 99999999988776211110
Q ss_pred ---------cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC--CCC-eEEEEe
Q 040324 338 ---------LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN--DSP-VMPIMV 405 (488)
Q Consensus 338 ---------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~-~~~~~~ 405 (488)
....+.++..+.++.++++.+..+ ...++..++++++.+++++.|+++|+++..+. .++ ++++.+
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~---g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~ 298 (355)
T TIGR03301 222 QWAYMEKTGKWRFTPPTHTVYAFAQALEELEAE---GGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLY 298 (355)
T ss_pred HHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHc---ccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEEC
Confidence 011235666777777888876421 12467788889999999999999998765432 233 345554
Q ss_pred CCc--chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 406 YNP--AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 406 ~~~--~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
... ....++.++|.++||.+.+.+ .. ..+.+||+++..+|++|+++++++|+++
T Consensus 299 ~~~~~~~~~~~~~~l~~~gi~i~~~~-~~---~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 299 PDDPDFDFDDFYQELKERGFVIYPGK-LT---LADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCCCcchHHHHHHHHHHCCEEEECCc-cc---cccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 421 344689999999999998532 11 1268999998889999999999999875
No 175
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.94 E-value=3.9e-24 Score=217.29 Aligned_cols=335 Identities=14% Similarity=0.089 Sum_probs=228.0
Q ss_pred cceeEEecccccc---CCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC------CCeEEeCC
Q 040324 99 VSRCLNLGSYNYL---GFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK------PAAIVFGM 169 (488)
Q Consensus 99 g~~~ld~~s~~~l---g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~------~~~i~~~s 169 (488)
|+.++||+.+.+- .++ .++.+.+++.+.+..... ..++......+|++.+|++++. ++.+++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~------~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~ 102 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKY------NGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCS 102 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCC------CCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECc
Confidence 4677888754432 122 245677777766654211 1122333347899999999872 23455555
Q ss_pred c-HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 170 G-YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 170 G-s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
| +++...++.++..+|+.|+++.|+|..+...++..|.++..++.. |++.+++.+.+ ..+
T Consensus 103 G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 170 (401)
T TIGR01264 103 GCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE------------KTA 170 (401)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc------------Cce
Confidence 5 556677788888999999999999999998899999998887642 57777766543 134
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-
Q 040324 242 IMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G- 317 (488)
++++....+++|.+.+ +++|+++|+++|+++|+||+|. .+-..+..........+....|+++||||.|+.+|
T Consensus 171 -~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl 247 (401)
T TIGR01264 171 -ALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYG--DMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGW 247 (401)
T ss_pred -EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhh--hhccCCcccccHHHcCCCCcEEEEccCcccCCCccc
Confidence 4455566888998775 8899999999999999999998 54434432222223333323588899999999888
Q ss_pred --cEEEeCH------HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-
Q 040324 318 --GYIAGSK------ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM- 388 (488)
Q Consensus 318 --g~i~~~~------~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 388 (488)
||+++++ ++++.+..... ...+ .+++.+.++.+.|+. ...++.++.+++++++.+++.+.|+++
T Consensus 248 RiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~q~a~~~~l~~----~~~~~l~~~~~~~~~~r~~l~~~L~~~~ 320 (401)
T TIGR01264 248 RLGWIIIHDRRGILRDIRDGLVKLSQ-RILG--PCTIVQGALPSILLR----TPQEYFDGTLSVLESNAMLCYGALAAVP 320 (401)
T ss_pred eEEEEEecCcchhHHHHHHHHHHHhh-ccCC--CCcHHHHHHHHHHHh----CcHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999863 34454443322 1122 455555555555542 112356778888999999999999988
Q ss_pred CCeecCCCCCCeEEEEeCC-----cchHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 389 GFEVLGDNDSPVMPIMVYN-----PAKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
|+.+..+.++.++++.+.. .....++++.|+ ++||.+.+... +. ..+++||++. .+++++++++++|.+
T Consensus 321 ~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~-f~--~~~~iRis~~--~~~~~l~~~l~rl~~ 395 (401)
T TIGR01264 321 GLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSC-FE--YPGFFRVVLT--VPVVMMEEACSRIQE 395 (401)
T ss_pred CCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchh-cC--CCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 6666667778888887642 124567888887 56999997331 11 2479999984 568999999999999
Q ss_pred HHHHh
Q 040324 463 IGDLV 467 (488)
Q Consensus 463 ~~~~~ 467 (488)
+++++
T Consensus 396 ~~~~~ 400 (401)
T TIGR01264 396 FCERH 400 (401)
T ss_pred HHhcc
Confidence 88653
No 176
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.94 E-value=4.9e-24 Score=212.37 Aligned_cols=297 Identities=20% Similarity=0.183 Sum_probs=207.3
Q ss_pred ChhhHHHHHHHHHHHhCCC--------CeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC
Q 040324 144 TLALHNELEECVARFVGKP--------AAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~--------~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~ 215 (488)
..+...++++.++++++.. ..++.++|++++..++.++.++++.|+++.+.|.++...++..+..+..++.+
T Consensus 34 ~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~ 113 (350)
T cd00609 34 PDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLD 113 (350)
T ss_pred CCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecc
Confidence 3344467778888777532 46666677777788888888999999999999999999999999998888865
Q ss_pred CHHHH---HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChH---HHHHHHHHcCcEEEEEccccccccCCCCC
Q 040324 216 TPSHL---EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLP---EIITICKRYKAYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 216 d~~~L---e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~---~l~~l~~~~g~~li~DE~~s~g~~g~~g~ 289 (488)
+...+ ++.++.... + .+.+|++++.++++|.+.+++ +|+++|+++|+++|+||+|+.+..+ +.
T Consensus 114 ~~~~~~~~~~~~~~~~~--------~-~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~--~~ 182 (350)
T cd00609 114 EEGGFLLDLELLEAAKT--------P-KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYD--GE 182 (350)
T ss_pred cccCCccCHHHHHhhcC--------c-cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeC--Cc
Confidence 21111 112222111 1 344566666999999988754 5558999999999999999844433 33
Q ss_pred CcchhcCCCCCCccEEEcccccccCCcc---cEEEeCH-HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCc
Q 040324 290 GVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSK-ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSC 365 (488)
Q Consensus 290 ~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~-~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~ 365 (488)
...........+.|++++|++|.++.+| |++++++ ++.+.++......+. +.++..+.++...|+... +
T Consensus 183 ~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~-----~ 255 (350)
T cd00609 183 PPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTS--GPSTLSQAAAAAALDDGE-----E 255 (350)
T ss_pred ccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhccc--CCChHHHHHHHHHHhCcH-----H
Confidence 2211122333456899999999998444 9999998 888888776553323 366666666666666531 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCee-cCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEee
Q 040324 366 RGAQKLARIRENSNFFRSKLQKMGFEV-LGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICI 444 (488)
Q Consensus 366 ~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~ 444 (488)
+.++..+++.++.+++++.|++.+... ..+..+.++++.+........+.+.|.++||.+.+..++.. .+.+++|+++
T Consensus 256 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~-~~~~~iRi~~ 334 (350)
T cd00609 256 HLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGE-GGEGFVRLSF 334 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEeccccccc-CCCCeEEEEe
Confidence 567788899999999999999986654 23444555566554443455566667777999986432221 3457999999
Q ss_pred cCCCCHHHHHHHHHHHH
Q 040324 445 SASHTKEDLIEALEVIS 461 (488)
Q Consensus 445 ~~~~t~edid~~l~~l~ 461 (488)
+.. ++|+++++++|+
T Consensus 335 ~~~--~~~i~~~~~al~ 349 (350)
T cd00609 335 ATP--EEELEEALERLA 349 (350)
T ss_pred eCC--HHHHHHHHHHhh
Confidence 765 999999999986
No 177
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=4.6e-24 Score=222.92 Aligned_cols=338 Identities=14% Similarity=0.123 Sum_probs=223.9
Q ss_pred CCcceeEEeccccc--cCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh------CC-CCeEEe
Q 040324 97 NNVSRCLNLGSYNY--LGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV------GK-PAAIVF 167 (488)
Q Consensus 97 ~~g~~~ld~~s~~~--lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~-~~~i~~ 167 (488)
..|+.+|+|+.++. +++. .++.+.+++.+++... ..| +......+|++.+|+++ +. ++.|++
T Consensus 143 ~~g~~~i~l~~G~p~~~~~~-~p~~~~~~~~~~~~~~-~~Y-------~~~~G~~~lReaia~~~~~~~~~~~~~~~I~i 213 (517)
T PRK13355 143 AAGTHILKLNIGNPAPFGFR-TPDEVVYDMAQQLTDT-EGY-------SDSKGLFSARKAIMQYAQLKGLPNVDVDDIYT 213 (517)
T ss_pred HcCCCeEEecCcCCCcCCCC-CCHHHHHHHHHHhhcC-CCC-------CCCcChHHHHHHHHHHHHhcCCCCCChhHEEE
Confidence 34788999975444 3443 2467788887776542 223 22233478999999988 22 356777
Q ss_pred CCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCC
Q 040324 168 GMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPW 239 (488)
Q Consensus 168 ~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~ 239 (488)
++|+.. ...++.+++++||.|+++.|+|..+...+...|++++.++.+ |++++++.+.. .
T Consensus 214 t~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------------~ 281 (517)
T PRK13355 214 GNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITS------------R 281 (517)
T ss_pred eCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCc------------C
Confidence 777665 467778889999999999999999999999999998887642 67777776643 2
Q ss_pred ceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc
Q 040324 240 KKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY 316 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~ 316 (488)
+++++++. ..+++|.+.+ +++|+++|++||++||+||+|. .+-..+..........++...+.++||||.++.+
T Consensus 282 ~k~i~i~n-P~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~--~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~ 358 (517)
T PRK13355 282 TKAIVIIN-PNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYD--RLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIA 358 (517)
T ss_pred ceEEEEEC-CCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhh--hhcCCCCCcccHHHhCCCCeEEEEecchhhccCc
Confidence 55666654 4888998887 8999999999999999999998 4433332211222222332345569999999988
Q ss_pred c---cEEEe--CHHH----HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 040324 317 G---GYIAG--SKEL----IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK 387 (488)
Q Consensus 317 G---g~i~~--~~~~----~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (488)
| ||++. ++++ ++.+..... ...+ .+.+...++.++|+-. ....+...+ ..++.++.+++.+.|++
T Consensus 359 G~RiG~~i~~~~~~~~~~~~~~l~~~~~-~~~~--~~~~~q~a~~~aL~~~--~~~~~~~~~-~~~~~~~r~~l~~~L~~ 432 (517)
T PRK13355 359 GYRIGWMILSGNKRIAKDYIEGLNMLAN-MRLC--SNVPAQSIVQTALGGH--QSVKDYLVP-GGRVYEQRELVYNALNA 432 (517)
T ss_pred ccceEEEEeeCchhhHHHHHHHHHHHhc-CcCC--cChHHHHHHHHHhcCC--ccHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence 8 99984 4543 343432222 1122 5556666666666310 000112222 23455667889999988
Q ss_pred C-CCeecCCCCCCeEEEEeCCc----chHHHHHHH-HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 388 M-GFEVLGDNDSPVMPIMVYNP----AKVSSFSRE-CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 388 ~-g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
+ |+.+..+.++.++++.+... ....+++.. |.++||.+.+.. .+...+.+++||++ ..+++++++++++|.
T Consensus 433 ~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~-~F~~~~~~~~Ris~--~~~~~~l~~a~~rl~ 509 (517)
T PRK13355 433 IPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGT-GFNWDKPDHFRVVY--LPRLEDLEDAMDRLA 509 (517)
T ss_pred CCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcc-hhCCCCcCEEEEEe--CCCHHHHHHHHHHHH
Confidence 8 88887777776666655421 123455554 556699999732 12223457999998 578999999999999
Q ss_pred HHHHHh
Q 040324 462 RIGDLV 467 (488)
Q Consensus 462 ~~~~~~ 467 (488)
++++..
T Consensus 510 ~~~~~~ 515 (517)
T PRK13355 510 DFFSYY 515 (517)
T ss_pred HHHHHh
Confidence 998754
No 178
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.94 E-value=1.7e-24 Score=220.39 Aligned_cols=339 Identities=17% Similarity=0.138 Sum_probs=222.6
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh------CC-CCeEEeCCcH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV------GK-PAAIVFGMGY 171 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~-~~~i~~~sGs 171 (488)
+..++|++.++. .+. .++.+.+++.+++.+...... ...|+......+|++.+|+++ +. ++.+++++|+
T Consensus 33 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga 108 (409)
T PRK07590 33 EAKIIRLGIGDV-TQP-LPPAVIEAMHKAVDEMGTAET--FRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGA 108 (409)
T ss_pred CCceEEecCcCC-CCC-CCHHHHHHHHHHHhcccccCC--ccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence 456788874432 122 246677888887766321100 011222333478999999886 22 3678888888
Q ss_pred HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCe-----------EEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 172 VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGAT-----------IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 172 ~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~-----------v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
.....++..++.+||.|+++.|+|+.+...++..|.+ ++.++.+.-+.+..-+.+ +..
T Consensus 109 ~~al~~l~~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-----------~~~ 177 (409)
T PRK07590 109 KCDTGNILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-----------EKV 177 (409)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc-----------cCc
Confidence 7654444456689999999999999999999998886 777765311111111111 124
Q ss_pred eEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCc
Q 040324 241 KIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSY 316 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~ 316 (488)
++++++ ..++++|.+.+ +++|+++|++||++||+||+|. .+-..+........++. .+..|+++||||++|.+
T Consensus 178 k~i~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~--~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~p 254 (409)
T PRK07590 178 DIIYLC-FPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE--AFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFT 254 (409)
T ss_pred eEEEEe-CCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch--hhccCCCCCcchhhCCCcccceEEEecCccccCCc
Confidence 566665 66888998776 7788889999999999999998 44332221111222222 23457889999999988
Q ss_pred c---cEEEeCHHHHHHH-----------HhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHH
Q 040324 317 G---GYIAGSKELIQYL-----------KYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFR 382 (488)
Q Consensus 317 G---g~i~~~~~~~~~~-----------~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (488)
| ||+++++++++.+ ........+ .+.+.+.+.++.+++.. . ...+.++.++.++++.+.+.
T Consensus 255 GlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~---~-~~~~~~~~~~~~~~~r~~l~ 329 (409)
T PRK07590 255 GTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKF-NGVSYIVQRAAEAVYSP---E-GKAQIKELIDYYMENAKIIR 329 (409)
T ss_pred CceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcc-cCcCHHHHHHHHHHhcC---C-cHHHHHHHHHHHHHHHHHHH
Confidence 8 9999999988722 111111111 12455555555444431 1 12356677888899999999
Q ss_pred HHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 383 SKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 383 ~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
+.|++.|+.+..+.++.++|+.+.......++++.|++ +||.+.+.. .+...+.+++||+. ..+++++++++++|.
T Consensus 330 ~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~-~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~ 406 (409)
T PRK07590 330 EGLESAGFEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGS-GFGPSGEGYFRLSA--FGSRENVLEAMERIK 406 (409)
T ss_pred HHHHhcCCceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChh-HhCCCCCCEEEEEc--cCCHHHHHHHHHHHH
Confidence 99999888777666778888888765556788888876 599998732 12233457999985 468999999999997
Q ss_pred HH
Q 040324 462 RI 463 (488)
Q Consensus 462 ~~ 463 (488)
++
T Consensus 407 ~~ 408 (409)
T PRK07590 407 KA 408 (409)
T ss_pred hh
Confidence 65
No 179
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.94 E-value=5.8e-24 Score=215.90 Aligned_cols=337 Identities=16% Similarity=0.146 Sum_probs=224.3
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC---CCeEEeCCcH-HHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK---PAAIVFGMGY-VTN 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sGs-~a~ 174 (488)
|.+.+|++.+.+ .++ .++.+.+++.+.+.+....+. ...|..+..+.+++.+.+..|. ++.+++++|+ ++.
T Consensus 32 ~~~~i~l~~g~p-~~~-~~~~~~~~~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 106 (402)
T PRK06107 32 GRSIVDLTVGEP-DFD-TPDHIKQAAVAAIERGETKYT---LVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAI 106 (402)
T ss_pred cCCEEEcCCCCC-CCC-CCHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 456788863322 122 246677777777764222222 1124433334444444444454 2456677765 566
Q ss_pred hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc
Q 040324 175 SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE 247 (488)
Q Consensus 175 ~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e 247 (488)
..++.++.++|+.|+++.|+|..+...+...+..++.++.+ |++++++.+.+ ..++++++
T Consensus 107 ~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~------------~~~~v~l~- 173 (402)
T PRK06107 107 FLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP------------RTRWLILN- 173 (402)
T ss_pred HHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc------------CceEEEEE-
Confidence 66777788999999999999988887788788877766542 45666665532 24555555
Q ss_pred CcCCCCCCCCC---hHHHHHHHHHc-CcEEEEEccccccccCCCCCCcchhcCCCC--CCccEEEcccccccCCcc---c
Q 040324 248 GIYSMEGELCK---LPEIITICKRY-KAYTYLDEAHSIGAVGKTGRGVCELLGVDT--SDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 248 ~v~s~~G~~~~---l~~l~~l~~~~-g~~li~DE~~s~g~~g~~g~~~~~~~~v~p--~~~di~~~t~sK~~g~~G---g 318 (488)
...+++|.+.+ +++++++|++| ++++|+||+|+ .+...+........+.+ .+..++++||||.||.+| |
T Consensus 174 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~--~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG 251 (402)
T PRK06107 174 APSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD--HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIG 251 (402)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc--ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccccee
Confidence 55788998775 68888999998 99999999998 33333322111222222 235688899999998778 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDND 397 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 397 (488)
|+++++++++.+......... +.+.+.++++...|+. .....++.++.++++.+.+.+.|++. |+.+..+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~--~~s~~~q~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~g 324 (402)
T PRK06107 252 YAAGPADLIAAINKLQSQSSS--CPSSISQAAAAAALNG-----DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDG 324 (402)
T ss_pred eeecCHHHHHHHHHHHHhccc--CCChHHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCc
Confidence 999999999988775542222 2566666665555531 12356778888999999999999887 777776767
Q ss_pred CCeEEEEeCC------c-----chHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 398 SPVMPIMVYN------P-----AKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 398 ~~~~~~~~~~------~-----~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+.++|+.+.. + ....+++.+|++ +||.+.+... +.. .+++||++. .++|++++++++|.++++
T Consensus 325 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~-Fg~--~~~iRis~~--~~~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 325 AFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTA-YGL--SPYFRLSIA--TSLETLEEACARIERAVA 399 (402)
T ss_pred ceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccc-cCC--CCeEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 7777776521 1 134577776665 5999997332 221 368999995 589999999999999887
Q ss_pred Hh
Q 040324 466 LV 467 (488)
Q Consensus 466 ~~ 467 (488)
++
T Consensus 400 ~~ 401 (402)
T PRK06107 400 AL 401 (402)
T ss_pred hc
Confidence 65
No 180
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.94 E-value=5.3e-24 Score=216.66 Aligned_cols=336 Identities=15% Similarity=0.141 Sum_probs=229.3
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCC-CCccc-CCCChhhHHHHHHHHHHHhCC--CCeEEeCCcH-HH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHST-CSSRV-DGGTLALHNELEECVARFVGK--PAAIVFGMGY-VT 173 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~-~~~~~-~~g~~~~~~~l~~~la~~~g~--~~~i~~~sGs-~a 173 (488)
+.-|+|.++ .+..++.+.+++.+.++++.... .+... ..-..+..+++++.+|++++. ++.+++++|+ ++
T Consensus 23 ~~iYld~a~-----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~ 97 (406)
T PRK09295 23 PLAYLDSAA-----SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEG 97 (406)
T ss_pred ceEEEeCcc-----cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHH
Confidence 356777653 33345678888888876543211 11110 001234567899999999986 3455566554 45
Q ss_pred Hhhhhhc----ccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 174 NSSILPV----LMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 174 ~~~~~~~----~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+..++.. ...+|+.|++..+.|++.... ++..|.+++.++.+ |+++|++.+.+ +
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------------~ 164 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDE-------------R 164 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCC-------------C
Confidence 4544443 457899999999999875432 35568888888753 67788777643 3
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GY 319 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~ 319 (488)
+.+|++..+.+++|.+.|+++|.++|+++|+++++|++|+.|... .++...++|+++.|++|.+|..| |+
T Consensus 165 t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~ 235 (406)
T PRK09295 165 TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHP---------VDVQALDCDFYVFSGHKLYGPTGIGI 235 (406)
T ss_pred cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccc---------cCchhcCCCEEEeehhhccCCCCcEE
Confidence 346666789999999999999999999999999999999854331 23333456899999999888777 99
Q ss_pred EEeCHHHHHHHHhhCCC-------------------Ccc-cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHH
Q 040324 320 IAGSKELIQYLKYNCPA-------------------HLY-ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSN 379 (488)
Q Consensus 320 i~~~~~~~~~~~~~~~~-------------------~~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~ 379 (488)
++.++++++.+.....+ ..+ ..+.+.....+..++++.+... ..+...++.+++.+
T Consensus 236 l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~----g~~~i~~~~~~l~~ 311 (406)
T PRK09295 236 LYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSAL----GLNNIAEYEQNLMH 311 (406)
T ss_pred EEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHH
Confidence 99998887655321100 001 1135666777788888887421 34567788888999
Q ss_pred HHHHHHHhC-CCeecCCC-CCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCcc-----CCCCeEEEeecCCCCHHH
Q 040324 380 FFRSKLQKM-GFEVLGDN-DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATP-----LLLARARICISASHTKED 452 (488)
Q Consensus 380 ~l~~~L~~~-g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~-----~~~~~iRi~~~~~~t~ed 452 (488)
+++++|+++ |+.+..+. ..+++.+.+.. ....++.+.|.++||.+........+ ...+.+|++++..+|++|
T Consensus 312 ~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~-~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~d 390 (406)
T PRK09295 312 YALSQLESVPDLTLYGPQNRLGVIAFNLGK-HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEE 390 (406)
T ss_pred HHHHHHhcCCCEEEeCCCCCceEEEEEECC-cCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHH
Confidence 999999887 67776543 24566555532 34557888888889999742211110 112579999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 040324 453 LIEALEVISRIGDL 466 (488)
Q Consensus 453 id~~l~~l~~~~~~ 466 (488)
||+++++|+++..-
T Consensus 391 id~l~~~l~~i~~~ 404 (406)
T PRK09295 391 VDRLVAGLQRIHRL 404 (406)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987553
No 181
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=5.4e-24 Score=215.35 Aligned_cols=331 Identities=15% Similarity=0.163 Sum_probs=221.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CCeEEeCCc-
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PAAIVFGMG- 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG- 170 (488)
+..+++|..+.. .+. .++.+.+++.+.+......+ +......+|++.+|+++ |. ++.+++++|
T Consensus 29 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~ 99 (388)
T PRK07337 29 GRDIIHMGIGEP-DFT-APEPVVEAAARALRRGVTQY-------TSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGA 99 (388)
T ss_pred CCCEEEeCCcCC-CCC-CCHHHHHHHHHHHhcCCCCC-------CCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCc
Confidence 455677763322 122 24567777777765422222 22223478889999886 32 234555555
Q ss_pred HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 171 YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
+++...++.++.++||.|+++.|+|+.+...++..|++++.++.+ |++++++.+.+ .++++
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~~v 167 (388)
T PRK07337 100 SAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE------------RTRGV 167 (388)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc------------cceEE
Confidence 555566777788999999999999999988888889998888753 46666665542 24544
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--- 317 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--- 317 (488)
++ ....+++|...+ +++|+++|+++|+++|+||+|. .+...+.. ....... +..+.+.||||.+|.+|
T Consensus 168 ~l-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~-~~~~~~~--~~vi~~~S~SK~~~~~G~Ri 241 (388)
T PRK07337 168 LL-ASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ--GLSYDAAP-VSALSLG--DDVITINSFSKYFNMTGWRL 241 (388)
T ss_pred EE-ECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccc--ccccCCCC-cChhhcc--CCEEEEEechhhcCCchhhe
Confidence 44 555788898775 7889999999999999999998 45443321 1111221 22467889999999877
Q ss_pred cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee-cCCC
Q 040324 318 GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEV-LGDN 396 (488)
Q Consensus 318 g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~ 396 (488)
||+++++++++.+.........+ .+++...++.++++. + ..+...+.+++++++.+++.+.|++.|+.+ ..+.
T Consensus 242 G~~~~~~~l~~~l~~~~~~~~~~--~s~~~q~~~~~~l~~---~-~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~ 315 (388)
T PRK07337 242 GWLVVPEALVGTFEKLAQNLFIC--ASALAQHAALACFEP---D-TLAIYERRRAEFKRRRDFIVPALESLGFKVPVMPD 315 (388)
T ss_pred eeeecCHHHHHHHHHHHHHhccC--CChHHHHHHHHHhcc---C-chHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 99999999988887654322222 556655555555431 1 112346677888999999999999988764 3455
Q ss_pred CCCeEEEEeCCc-----chHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 397 DSPVMPIMVYNP-----AKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 397 ~~~~~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
++.++++.+... ....+++++|+ ++||.+.+......+.+.+++|++++ .+++++++++++|.+++
T Consensus 316 ~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 316 GAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEEAVARLGKLF 387 (388)
T ss_pred eeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHh
Confidence 677888877531 34567888766 46999987321112223579999995 36899999999998754
No 182
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=3.2e-24 Score=216.05 Aligned_cols=322 Identities=18% Similarity=0.197 Sum_probs=224.4
Q ss_pred CCCCCCccchHHHHHHHHHcCCCCCC--cccCCCChhhHHHHHHHHHHHhCCC---CeEEeCCcHHHHhhhhhcccC---
Q 040324 112 GFAAADEYCTPRVIDSLKKYSHSTCS--SRVDGGTLALHNELEECVARFVGKP---AAIVFGMGYVTNSSILPVLMG--- 183 (488)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~~~~~~--~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sGs~a~~~~~~~~~~--- 183 (488)
+.+..++.+.+++.+.++.+...... ............++++.++++++.+ .+++++++++++..++.++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~ 86 (373)
T cd06453 7 ATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANK 86 (373)
T ss_pred cccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCC
Confidence 44445678888888887665332111 0111123455678999999999976 455566666777777777765
Q ss_pred CCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 184 KGSLIISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 184 ~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
+++.|++..+.|++... ..+..|++++.++.+ |++++++.+.+ +..+|++..+.++.|
T Consensus 87 ~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~-------------~~~~v~~~~~~~~tG 153 (373)
T cd06453 87 PGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE-------------RTKLVAVTHVSNVLG 153 (373)
T ss_pred CCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcC-------------CceEEEEeCcccccC
Confidence 89999999999998543 234668888888754 78888887754 344666778888899
Q ss_pred CCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHHhh
Q 040324 255 ELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLKYN 333 (488)
Q Consensus 255 ~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~~~ 333 (488)
.+.++++|.++|+++|++|++|++|+.|... +++...++|+++.|++|.+++.| |+++.++++++.+...
T Consensus 154 ~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~ 224 (373)
T cd06453 154 TINPVKEIGEIAHEAGVPVLVDGAQSAGHMP---------VDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPY 224 (373)
T ss_pred CcCCHHHHHHHHHHcCCEEEEEhhhhcCcee---------eeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCe
Confidence 9999999999999999999999999854432 11222345888889999998766 9999999888776542
Q ss_pred CCCC------------------ccc-CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeec
Q 040324 334 CPAH------------------LYA-TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVL 393 (488)
Q Consensus 334 ~~~~------------------~~~-~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 393 (488)
..+. .+. .+.+.....+..++++.+.+. ..+++.++.+++.+++++.|+++ ++++.
T Consensus 225 ~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~----g~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 300 (373)
T cd06453 225 GGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKI----GMEAIAAHEHELTAYALERLSEIPGVRVY 300 (373)
T ss_pred ecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHc----CHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 2110 011 123444455556677776422 34677888889999999999988 57765
Q ss_pred CCC--CCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCc-----cCCCCeEEEeecCCCCHHHHHHHHHHH
Q 040324 394 GDN--DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT-----PLLLARARICISASHTKEDLIEALEVI 460 (488)
Q Consensus 394 ~~~--~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-----~~~~~~iRi~~~~~~t~edid~~l~~l 460 (488)
.+. .++++++.+.. .+..++.+.|.++||.+....+... ....+.+|++++..+|++|+|+++++|
T Consensus 301 ~~~~~~~~~~~~~~~~-~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 301 GDAEDRAGVVSFNLEG-IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CCccccCCeEEEEECC-cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 432 34666666543 3567899999999999874322111 112468999999999999999999874
No 183
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.94 E-value=4.3e-24 Score=214.21 Aligned_cols=318 Identities=17% Similarity=0.191 Sum_probs=214.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----C---C-CCeEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----G---K-PAAIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g---~-~~~i~~~sG 170 (488)
+...+||+.+++. ...++.+.+++.+..... .++ ......++++.+|+++ | . ++.+++++|
T Consensus 26 ~~~~i~l~~~~p~--~~~~~~~~~~~~~~~~~~--~Y~-------~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G 94 (364)
T PRK07865 26 PDGIVDLSVGTPV--DPVPPVIQEALAAAADAP--GYP-------TTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIG 94 (364)
T ss_pred CCCEEEcCCCCCC--CCCCHHHHHHHHHHHhhC--CCC-------CccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccC
Confidence 4567898754432 111345566665543221 221 1222357777888776 3 2 357888888
Q ss_pred HHHH-hhhhhcc-cCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC
Q 040324 171 YVTN-SSILPVL-MGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG 248 (488)
Q Consensus 171 s~a~-~~~~~~~-~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~ 248 (488)
+... ..++..+ +++|+.|+++.|+|+.+...++..|+++..++ ++++++. . ..+++++ .+
T Consensus 95 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~--~~~~l~~---~------------~~~~v~~-~~ 156 (364)
T PRK07865 95 SKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD--SLTELGP---Q------------RPALIWL-NS 156 (364)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC--ChhhCCc---c------------cceEEEE-cC
Confidence 7765 4444566 68999999999999999999999999888764 3333321 1 1344554 47
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchh----cCCCCCCccEEEcccccccCCcc---c
Q 040324 249 IYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCEL----LGVDTSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 249 v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~----~~v~p~~~di~~~t~sK~~g~~G---g 318 (488)
.++++|.+.+ +++|+++|++||++||+||+|. .+...+...... .+.+ .+..|+++||||.+|.+| |
T Consensus 157 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~GlRiG 233 (364)
T PRK07865 157 PSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL--ELGWDAEPVSILDPRVCGGD-HTGLLAVHSLSKQSNLAGYRAG 233 (364)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh--hhccCCCCCccccccccCCc-cceEEEEeechhccCCCceeeE
Confidence 8899998765 7889999999999999999998 443333221111 0111 234688999999998877 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+.........+ .+++.+.++.+.|+. .+..++.++.++++.+.+.+.|++.|+.+..+.++
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 305 (364)
T PRK07865 234 FVAGDPALVAELLEVRKHAGMM--VPAPVQAAMVAALGD------DAHVREQRERYARRRAVLRPALEAAGFRVDHSEAG 305 (364)
T ss_pred EEecCHHHHHHHHHHHHhcCCC--cCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc
Confidence 9999999998887644322222 556665555555532 12456677888999999999999988877666555
Q ss_pred CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 399 PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
.++++.+. ....++.+.|.++||.+.+..+ +.+...+++||+++ .+++++++++++|.
T Consensus 306 ~~~~~~~~--~~~~~~~~~l~~~gv~v~pg~~-f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 306 LYLWATRG--EDCWDTVAWLAERGILVAPGDF-YGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred EEEEEeCC--CCHHHHHHHHHHCCEEEeCccc-cCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 55666552 3456788889999999987332 23334579999985 37999999999874
No 184
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.94 E-value=9e-24 Score=215.13 Aligned_cols=336 Identities=14% Similarity=0.143 Sum_probs=228.4
Q ss_pred cceeEEeccccccC---CCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------------C
Q 040324 99 VSRCLNLGSYNYLG---FAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------------P 162 (488)
Q Consensus 99 g~~~ld~~s~~~lg---~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------------~ 162 (488)
|+.++||+.+++-. +. .++.+.+++.+.++... . ..|+......+|++.+|++++. +
T Consensus 32 ~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~~-~-----~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 32 PKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQE-C-----NGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred CCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcCC-C-----CCCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 78899998433210 11 24566667666665411 0 1112222347899999998752 2
Q ss_pred CeEEeCCcHH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCC
Q 040324 163 AAIVFGMGYV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPR 234 (488)
Q Consensus 163 ~~i~~~sGs~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~ 234 (488)
+.+++++|+. ++..++.++.++||.|+++.|+|..+...++..|.++..++.. |++++++.+.+
T Consensus 105 ~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~-------- 176 (412)
T PTZ00433 105 DNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDD-------- 176 (412)
T ss_pred hhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhcc--------
Confidence 4566666644 5677888888999999999999999999999999998888742 56777766543
Q ss_pred CCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccccc
Q 040324 235 TRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSK 311 (488)
Q Consensus 235 ~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK 311 (488)
..+++ ++....+++|...+ +++|+++|++||++||+||+|. .+-..+........+++....|+++||||
T Consensus 177 ----~~~~i-~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~~i~~~SfSK 249 (412)
T PTZ00433 177 ----RTKAL-IMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA--GMVFNGATFTSVADFDTTVPRVILGGTAK 249 (412)
T ss_pred ----CceEE-EEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc--ccccCCCCccchhhccCCCceEEEccchh
Confidence 13444 45566788897665 7888999999999999999998 44332221111222222222478899999
Q ss_pred ccCCcc---cEEEe------CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHH
Q 040324 312 SFGSYG---GYIAG------SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFR 382 (488)
Q Consensus 312 ~~g~~G---g~i~~------~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (488)
.+|.+| ||+++ .+++++.+...... .+ +.+++.+.++.+.|..- ...+.++.+++++++.+.+.
T Consensus 250 ~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~l~ 322 (412)
T PTZ00433 250 NLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML-VC--GPCSVVQAALGEALLNT----PQEHLEQIVAKLEEGAMVLY 322 (412)
T ss_pred hcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc-cC--CCChHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHHHH
Confidence 999888 99986 24677766654321 12 26666666665665420 12256778888899999999
Q ss_pred HHHHhC-CCeecCCCCCCeEEEEeCCc-----chHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHH
Q 040324 383 SKLQKM-GFEVLGDNDSPVMPIMVYNP-----AKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIE 455 (488)
Q Consensus 383 ~~L~~~-g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~ 455 (488)
+.|++. |+.+..+.++.++++.+... ....++++.|++ +||.+.+... +. ..+++||++. ..++++++
T Consensus 323 ~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~-f~--~~~~iRis~~--~~~e~l~~ 397 (412)
T PTZ00433 323 NHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEI-FH--MPGFTRLTIS--RPVEVLRE 397 (412)
T ss_pred HHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccc-cC--CCCeEEEEec--CCHHHHHH
Confidence 999875 67766666677777776431 245689999985 6999997321 11 1478999995 45899999
Q ss_pred HHHHHHHHHHHhC
Q 040324 456 ALEVISRIGDLVG 468 (488)
Q Consensus 456 ~l~~l~~~~~~~~ 468 (488)
++++|.++++...
T Consensus 398 al~~l~~~~~~~~ 410 (412)
T PTZ00433 398 AVERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887653
No 185
>PLN02187 rooty/superroot1
Probab=99.94 E-value=9.3e-24 Score=216.94 Aligned_cols=345 Identities=15% Similarity=0.101 Sum_probs=227.9
Q ss_pred cceeEEeccccccCC--CCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCC
Q 040324 99 VSRCLNLGSYNYLGF--AAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGM 169 (488)
Q Consensus 99 g~~~ld~~s~~~lg~--~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~s 169 (488)
++.+|+|+..++--+ ...++++.+++.+.++.. ... .|+......+|++.+|++++. ++.+++++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~-~~~-----~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~ 138 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSG-KGN-----SYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTA 138 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCC-CCC-----CCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence 578898874322111 112345677777766542 111 123333457899999998842 34566666
Q ss_pred cHH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC---C----CHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 170 GYV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH---N----TPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 170 Gs~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~---~----d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
|+. +...++.+++++||.|+++.|+|+.+...+...|.+++.++. + |+++|++++.+ .++
T Consensus 139 G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~------------~~~ 206 (462)
T PLN02187 139 GCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADE------------NTV 206 (462)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCC------------CcE
Confidence 654 567788888999999999999999998888899999988864 2 67788776543 244
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-
Q 040324 242 IMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G- 317 (488)
+++++- ..+++|.+.+ +++|+++|++||++||+||+|....++ +........+......|+++||||.|+.+|
T Consensus 207 ~v~i~n-P~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~--~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGl 283 (462)
T PLN02187 207 AMVVIN-PNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFG--DNPFVSMGKFASIVPVLTLAGISKGWVVPGW 283 (462)
T ss_pred EEEEeC-CCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccC--CCCceeHHHhccCCcEEEEecchhhcCCccc
Confidence 455544 4688898776 889999999999999999999844443 221111111222223688899999999988
Q ss_pred --cEEEeC-H-HH---HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCC
Q 040324 318 --GYIAGS-K-EL---IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGF 390 (488)
Q Consensus 318 --g~i~~~-~-~~---~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 390 (488)
||++++ + .+ ++.+......+..+.+.+.+.++++.++|+. ...+..++.++.++++.+.+.+.|++.+.
T Consensus 284 RiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~----~~~~~l~~~~~~l~~~r~~l~~~L~~~~~ 359 (462)
T PLN02187 284 KIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEK----ADKNFFAKKNKILKHNVDLVCDRLKDIPC 359 (462)
T ss_pred eeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc----CcHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 999973 3 22 3344433332223323466666666666642 01235677888999999999999998753
Q ss_pred ee--cCCCCCCeEEEEeCCc-----chHHHHHHHH-HHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 391 EV--LGDNDSPVMPIMVYNP-----AKVSSFSREC-LKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 391 ~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.. ..+.++.++++.+... ....+++.++ .++||.+.|.. .+. ..+++||++. ..++++++++++|.+
T Consensus 360 ~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~-~fg--~~~~iRis~~--~~~e~l~~al~rL~~ 434 (462)
T PLN02187 360 VVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGD-ALG--LKNWMRITIG--VEAHMLEDALERLKG 434 (462)
T ss_pred CcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECcc-ccC--CCCeEEEEeC--CCHHHHHHHHHHHHH
Confidence 32 2345566666655321 1344666555 66699999722 111 2579999984 579999999999999
Q ss_pred HHHHhCCccCC
Q 040324 463 IGDLVGIKYFP 473 (488)
Q Consensus 463 ~~~~~~~~~~~ 473 (488)
+++++..+...
T Consensus 435 ~l~~~~~~~~~ 445 (462)
T PLN02187 435 FCTRHAKKTET 445 (462)
T ss_pred HHHHhhhcccc
Confidence 99888766533
No 186
>PRK08363 alanine aminotransferase; Validated
Probab=99.94 E-value=5.2e-24 Score=216.14 Aligned_cols=335 Identities=15% Similarity=0.114 Sum_probs=224.3
Q ss_pred cceeEEecccccc--CCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCC
Q 040324 99 VSRCLNLGSYNYL--GFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGM 169 (488)
Q Consensus 99 g~~~ld~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~s 169 (488)
|+.++|++.+.+. .++ .++.+.+++.+.+......+ +......+|++.++++++. ++.+++++
T Consensus 29 ~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y-------~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 100 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYY-------GPSEGLPELREAIVKREKRKNGVDITPDDVRVTA 100 (398)
T ss_pred CCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCC-------CCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeC
Confidence 6778999854442 333 34677777777665421112 2233347899999998742 23455555
Q ss_pred c-HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEee-C------CCHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 170 G-YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQ-H------NTPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 170 G-s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~-~------~d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
| ++++..++.+++++||.|+++.|+|..+...+...|..++.++ . .|++++++.+.+ ..+
T Consensus 101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 168 (398)
T PRK08363 101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE------------KTK 168 (398)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc------------ceE
Confidence 5 5566777888899999999999999999988888888877772 2 156666665532 245
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-
Q 040324 242 IMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G- 317 (488)
+++++ ...+++|.+.+ +++|+++|+++|+++|+||+|....+ .+... ....+++....+++.||||.++.+|
T Consensus 169 ~v~l~-~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~--~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~Gl 244 (398)
T PRK08363 169 AIAVI-NPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTY--EGKHV-SPGSLTKDVPVIVMNGLSKVYFATGW 244 (398)
T ss_pred EEEEE-CCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhcc--CCccc-CHHHcCcCCcEEEEecchhccCCccc
Confidence 55554 66888998876 89999999999999999999984333 22211 1112223334677899999998888
Q ss_pred --cEEEe--CHHHHHHHHhhCC---CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-C
Q 040324 318 --GYIAG--SKELIQYLKYNCP---AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-G 389 (488)
Q Consensus 318 --g~i~~--~~~~~~~~~~~~~---~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 389 (488)
||+++ ++++++.+..... ...+ +.+.+...++.++|.. ..++.++.+++++++.+++.+.|+++ +
T Consensus 245 RiG~~~~~~~~~~~~~l~~~~~~~~~~~~--~~s~~~q~~~~~~l~~-----~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 317 (398)
T PRK08363 245 RLGYIYFVDPEGKLAEVREAIDKLARIRL--CPNTPAQFAAIAGLTG-----PMDYLEEYMKKLKERRDYIYKRLNEIPG 317 (398)
T ss_pred eEEEEEEeCcHHHHHHHHHHHHHHhcccc--cCChHHHHHHHHHHhC-----ChHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99987 6666655543211 1112 2556665655555532 12356777888999999999999887 7
Q ss_pred CeecCCCCCCeEEEEeCCc--chHHHHHHH-HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 390 FEVLGDNDSPVMPIMVYNP--AKVSSFSRE-CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+.+..+.++.++++.+... ....+++.+ |.++||.+.+.. .+...+.+++||++ ..+++++++++++|.+++++
T Consensus 318 ~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~-~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 318 ISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGS-GFGEYGAGHFRLVF--LPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred CEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCch-hhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHH
Confidence 7766665555556555431 234455544 567799998732 12223457999998 46799999999999998765
Q ss_pred h
Q 040324 467 V 467 (488)
Q Consensus 467 ~ 467 (488)
.
T Consensus 395 ~ 395 (398)
T PRK08363 395 R 395 (398)
T ss_pred h
Confidence 3
No 187
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=5.4e-24 Score=215.64 Aligned_cols=329 Identities=16% Similarity=0.132 Sum_probs=224.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----C----CC--CeEEeC
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----G----KP--AAIVFG 168 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g----~~--~~i~~~ 168 (488)
|+.++||+.+.. .++ .++.+.+++.+.+... ..+ +......+|++.+|+++ + .+ +.++++
T Consensus 27 ~~~~i~l~~~~p-~~~-~~~~~~~a~~~~~~~~-~~Y-------~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it 96 (393)
T TIGR03538 27 SKPPIALSIGEP-KHP-TPAFVLEALRENLHGL-STY-------PTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPV 96 (393)
T ss_pred CCCeEEecCCCC-CCC-CCHHHHHHHHHHhhcc-CCC-------CCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEEC
Confidence 678899874432 222 2355666666654321 122 22222368888888887 2 22 367777
Q ss_pred CcHHHH-hhhhhcccCCCcE--EEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCC
Q 040324 169 MGYVTN-SSILPVLMGKGSL--IISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRP 238 (488)
Q Consensus 169 sGs~a~-~~~~~~~~~~~~~--Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~ 238 (488)
+|+... ..++.+++++|+. |+++.|+|..+...++..|.+++.++.+ |++++++.+.+
T Consensus 97 ~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~------------ 164 (393)
T TIGR03538 97 NGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWR------------ 164 (393)
T ss_pred CCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhh------------
Confidence 776654 6777888888875 9999999999988888999999888752 56777776643
Q ss_pred CceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCC--cchh---cCCCCCCccEEEcccc
Q 040324 239 WKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG--VCEL---LGVDTSDVDIMMGTFS 310 (488)
Q Consensus 239 ~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~--~~~~---~~v~p~~~di~~~t~s 310 (488)
..++++++ ...+++|.+.+ +++|+++|++|+++||+||+|....+...... .... .+.+..+..|++.|||
T Consensus 165 ~~k~i~l~-~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~S 243 (393)
T TIGR03538 165 RCQLLFVC-SPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLS 243 (393)
T ss_pred cceEEEEe-CCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecch
Confidence 14555555 66888998776 88999999999999999999983333211011 1111 1111233468899999
Q ss_pred cccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 040324 311 KSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK 387 (488)
Q Consensus 311 K~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (488)
|.++.+| ||+++++++++.+...... .+.+.+++.+.++.+++.. .+..++.++.++++.+.+.+.|++
T Consensus 244 K~~~~~GlRvG~~i~~~~l~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~L~~ 315 (393)
T TIGR03538 244 KRSNLPGLRSGFVAGDAEILKAFLRYRTY--HGCAMPIPTQLASIAAWND------EQHVRENRALYREKFAAVLEILGQ 315 (393)
T ss_pred hhcCCcccceEEEecCHHHHHHHHHHHHh--hccCcCHHHHHHHHHHhcC------hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888 9999999998888754432 1223566666665555531 124567788888889999999987
Q ss_pred CCCeecCCCCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCC-----ccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 388 MGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPA-----TPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~-----~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
. +.+..+.++.++++.+. ....++++.|++ +||.+.|..+-. .+.+.+++||++. .+++++++++++|.
T Consensus 316 ~-~~~~~p~gg~f~~~~~~--~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 390 (393)
T TIGR03538 316 V-LDLELPDAGFYLWPKVP--GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV--APLEECVEAAERIR 390 (393)
T ss_pred h-CcccCCCeeEEEEEECC--CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec--CCHHHHHHHHHHHH
Confidence 5 44555667788888775 335678888875 699999743211 1234579999984 47999999999997
Q ss_pred HH
Q 040324 462 RI 463 (488)
Q Consensus 462 ~~ 463 (488)
+.
T Consensus 391 ~~ 392 (393)
T TIGR03538 391 SF 392 (393)
T ss_pred Hh
Confidence 64
No 188
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.94 E-value=1.2e-23 Score=213.77 Aligned_cols=336 Identities=15% Similarity=0.090 Sum_probs=224.7
Q ss_pred cceeEEecccccc--CCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC--------CCeEEeC
Q 040324 99 VSRCLNLGSYNYL--GFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK--------PAAIVFG 168 (488)
Q Consensus 99 g~~~ld~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~ 168 (488)
|..++||+..++- .....++.+.+++.+.+..... ..++......++++.++++++. +++++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~ 103 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKF------NGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTS 103 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEec
Confidence 6788998733321 0111245666666666543210 1122333347899999999874 2345555
Q ss_pred CcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 169 MGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 169 sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
+|+++...++.++..+|+.|+++.|+|..+...+...|.++..++.+ |++++++.+.. ..+
T Consensus 104 G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~~ 171 (403)
T TIGR01265 104 GCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE------------KTV 171 (403)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc------------Ccc
Confidence 55667778888888999999999999999888888889988877542 56777766542 134
Q ss_pred EEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-
Q 040324 242 IMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG- 317 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G- 317 (488)
. +++....+++|.+.+ +++|+++|+++|+++|+||+|. .+-..+........+++....|+++||||.|+.+|
T Consensus 172 ~-v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 248 (403)
T TIGR01265 172 A-IVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYG--HMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGW 248 (403)
T ss_pred E-EEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc--ccccCCCCccchhhhccCCcEEEEeecccccCCCcc
Confidence 4 444455788898875 8999999999999999999998 44433322112222333333688899999998888
Q ss_pred --cEEEeC--HH-----HHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 318 --GYIAGS--KE-----LIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 318 --g~i~~~--~~-----~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
||++++ ++ +.+.+..... ... +.+.+.+.++.+.|+.- .....++.+++++++.+.+.+.|+..
T Consensus 249 RiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~q~~~~~~l~~~----~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (403)
T TIGR01265 249 RLGWIIIHDPHGIFRDTVLQGLKNLLQ-RIL--GPATIVQGALPDILENT----PQEFFDGKISVLKSNAELCYEELKDI 321 (403)
T ss_pred eEEEEEEeCchhhhHHHHHHHHHHHhh-hhc--CCChHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999873 22 3444433322 112 24556655555555421 11255678888899999999999887
Q ss_pred -CCeecCCCCCCeEEEEeCCc-----chHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 389 -GFEVLGDNDSPVMPIMVYNP-----AKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 389 -g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
|+.+..+.++.++++.+... ....++++.|+ ++||.+.+.... . ..+++||++. ..++++++++++|.
T Consensus 322 ~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f-~--~~~~iRis~~--~~~~~l~~~l~~l~ 396 (403)
T TIGR01265 322 PGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAF-G--LPNWVRITIT--VPESMLEEACSRIK 396 (403)
T ss_pred CCceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCcccc-C--CCCeEEEEec--CCHHHHHHHHHHHH
Confidence 77766677788888877532 14568888875 569999973321 1 2478999985 56899999999999
Q ss_pred HHHHHh
Q 040324 462 RIGDLV 467 (488)
Q Consensus 462 ~~~~~~ 467 (488)
++++++
T Consensus 397 ~~~~~~ 402 (403)
T TIGR01265 397 EFCERH 402 (403)
T ss_pred HHHHhc
Confidence 888654
No 189
>PLN02656 tyrosine transaminase
Probab=99.94 E-value=7.6e-24 Score=215.35 Aligned_cols=335 Identities=13% Similarity=0.104 Sum_probs=224.5
Q ss_pred cceeEEecccccc--CCCCCCccchHHHHHHHHHcC-CCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeC
Q 040324 99 VSRCLNLGSYNYL--GFAAADEYCTPRVIDSLKKYS-HSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFG 168 (488)
Q Consensus 99 g~~~ld~~s~~~l--g~~~~~~~v~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~ 168 (488)
|+.+++|+-+++- .....++.+.+++.+++.... ..+ +......++++.++++++. ++.++++
T Consensus 30 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-------~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t 102 (409)
T PLN02656 30 GKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGY-------APTVGLPQARRAIAEYLSRDLPYKLSLDDVFIT 102 (409)
T ss_pred CCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCC-------CCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEe
Confidence 7889999733321 111224667777777766421 122 2223337888999988742 2345555
Q ss_pred Cc-HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 169 MG-YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 169 sG-s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+| +++...++.++.++||.|+++.|.|+.+.......|.++..++.. |++++++.+.+ .+
T Consensus 103 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~------------~~ 170 (409)
T PLN02656 103 SGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ------------NT 170 (409)
T ss_pred CChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc------------Cc
Confidence 55 555567777788999999999999998888888889998888742 66777766543 24
Q ss_pred eEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc
Q 040324 241 KIMVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
++++++. ..+++|.+. .+++|+++|++||++||+||+|. .+-..+........++..+..|+++||||.|+.+|
T Consensus 171 ~~v~l~~-P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG 247 (409)
T PLN02656 171 VALVIIN-PGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYG--HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPG 247 (409)
T ss_pred eEEEEEC-CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhh--hcccCCCCcccHHHhcccCcEEEEcccchhccCcc
Confidence 5555554 477888875 58999999999999999999998 44333322111111223334688999999999888
Q ss_pred ---cEEEeC--------HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH
Q 040324 318 ---GYIAGS--------KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ 386 (488)
Q Consensus 318 ---g~i~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (488)
||++++ +++++.+...... .. +.+.+.+.++.+.|+.- ..+..++.+++++++.+.+.+.|+
T Consensus 248 lRiG~~i~~~~~~~~~~~~~~~~~~~~~~~-~~--~~s~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~r~~~~~~L~ 320 (409)
T PLN02656 248 WRLGWFVTTDPSGSFRDPKIVERIKKYFDI-LG--GPATFIQAAVPTILEQT----DESFFKKTINILKQSSDICCDRIK 320 (409)
T ss_pred eeEEEEEEeCcccccccHHHHHHHHHHHhh-hc--CCCHHHHHHHHHHHhcC----cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999983 5788877654332 12 25566666666666421 122467778888999999999998
Q ss_pred hCC-Ce-ecCCCCCCeEEEEeCCc-----chHHHH-HHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHH
Q 040324 387 KMG-FE-VLGDNDSPVMPIMVYNP-----AKVSSF-SRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALE 458 (488)
Q Consensus 387 ~~g-~~-~~~~~~~~~~~~~~~~~-----~~~~~~-~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (488)
+++ +. +..+.++.++|+.+... ....++ .+.|.++||.+.|... +. ..+++||+++ .++++++++++
T Consensus 321 ~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~-fg--~~~~iRi~~~--~~~e~l~eal~ 395 (409)
T PLN02656 321 EIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTA-VG--LKNWLRITFA--ADPSSLEEALG 395 (409)
T ss_pred hCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchh-cC--CCCeEEEEeC--CCHHHHHHHHH
Confidence 874 22 23455667777776421 123344 4556677999997322 11 2479999995 48999999999
Q ss_pred HHHHHHHHh
Q 040324 459 VISRIGDLV 467 (488)
Q Consensus 459 ~l~~~~~~~ 467 (488)
+|.+++...
T Consensus 396 rl~~~~~~~ 404 (409)
T PLN02656 396 RIKSFYLRH 404 (409)
T ss_pred HHHHHHHHh
Confidence 999988754
No 190
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=1.1e-23 Score=210.44 Aligned_cols=317 Identities=18% Similarity=0.196 Sum_probs=214.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC----CCeEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK----PAAIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~----~~~i~~~sG 170 (488)
++..+||++++.. ...++.+.+++.+..... .+. ...|. .+|++.+++++ +. ++.+++++|
T Consensus 20 ~~~~i~l~~~~p~--~~~~~~~~~~~~~~~~~~--~Y~---~~~G~----~~lr~~ia~~~~~~~~~~~~~~~~I~it~G 88 (357)
T TIGR03539 20 PDGIVDLSVGTPV--DPVPPLIRAALAAAADAP--GYP---QTWGT----PELREAIVDWLERRRGVPGLDPTAVLPVIG 88 (357)
T ss_pred CCCeEEccCCCCC--CCCCHHHHHHHHHHHhhC--CCC---cccCC----HHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence 6778999865432 112355666666544321 121 11233 56777777766 32 257777877
Q ss_pred HHHH-hhhhhcc-cCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC
Q 040324 171 YVTN-SSILPVL-MGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG 248 (488)
Q Consensus 171 s~a~-~~~~~~~-~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~ 248 (488)
+... ..++..+ .++||.|+++.|+|+.+...++..|++++.++ +++.++ . + +..+|++..
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--~~~~l~----~-----------~-~~~~v~~~~ 150 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD--DPTELD----P-----------V-GPDLIWLNS 150 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC--ChhhcC----c-----------c-CccEEEEeC
Confidence 6654 4555666 68999999999999999988888899887763 433222 1 1 233455557
Q ss_pred cCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchh----cCCCCCCccEEEcccccccCCcc---c
Q 040324 249 IYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCEL----LGVDTSDVDIMMGTFSKSFGSYG---G 318 (488)
Q Consensus 249 v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~----~~v~p~~~di~~~t~sK~~g~~G---g 318 (488)
.++++|...+ +++|.++|+++|+++|+||+|. .+...+...... .+.. .+..|+++||||.+|.+| |
T Consensus 151 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~~G~R~G 227 (357)
T TIGR03539 151 PGNPTGRVLSVDELRAIVAWARERGAVVASDECYL--ELGWEGRPVSILDPRVCGGD-HTGLLAVHSLSKRSNLAGYRAG 227 (357)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh--hhccCCCCccceecccCCCc-cccEEEEeccccccCCCceeEE
Confidence 8889998775 7789999999999999999998 444333221111 0111 124688999999998777 9
Q ss_pred EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC
Q 040324 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS 398 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 398 (488)
|+++++++++.+......... +.+++...++.++|+. .......+++++++.+++.+.|++.|+.+..+.++
T Consensus 228 ~~i~~~~~~~~~~~~~~~~~~--~~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~~ 299 (357)
T TIGR03539 228 FVAGDPALVAELLTVRKHAGL--MVPAPVQAAMVAALGD------DGHVAEQKARYAARRAQLKPALEKAGFRIDHSEAG 299 (357)
T ss_pred EEecCHHHHHHHHHHHhhccc--CCCHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCcc
Confidence 999999999888765432222 2556666655555532 12455677888889999999999988877666666
Q ss_pred CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHH
Q 040324 399 PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVI 460 (488)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (488)
.++++... ....++.+.|.++||.+.+..+ +.+.+++++||+++ .+++++++++++|
T Consensus 300 ~~~~~~~~--~~~~~~~~~l~~~gV~v~pg~~-f~~~~~~~iRis~~--~~~~~i~~~~~~l 356 (357)
T TIGR03539 300 LYLWATRG--EDAWDTVDRLAELGILVAPGDF-YGPAGSQHVRVALT--ATDERIAAAVARL 356 (357)
T ss_pred EEEEEECC--CCHHHHHHHHHhCCEEECCccc-cCCCCCCeEEEEec--CCHHHHHHHHHhh
Confidence 66666553 2456788899899999987442 23334689999995 3789999999876
No 191
>PRK09265 aminotransferase AlaT; Validated
Probab=99.94 E-value=1.9e-23 Score=212.33 Aligned_cols=334 Identities=15% Similarity=0.110 Sum_probs=219.2
Q ss_pred cceeEEeccccccCCCC-CCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhC------C-CCeEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAA-ADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG------K-PAAIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~-~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~-~~~i~~~sG 170 (488)
|+..+||++++...++. .++.+.+++.+.+... ..+ +......+|++.+|+++. . ++.+++++|
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~-~~Y-------~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G 103 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA-QGY-------SDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNG 103 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC-CCC-------CCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCC
Confidence 67788987544422221 2456777776655431 222 222233689999999873 2 346777777
Q ss_pred HHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 171 YVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 171 s~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
+.. ...++.++.++||.|+++.|.|..+...++..|..++.++.+ |++++++.+.. ..++
T Consensus 104 ~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~------------~~~~ 171 (404)
T PRK09265 104 VSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP------------RTKA 171 (404)
T ss_pred hHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc------------cceE
Confidence 665 467778888999999999999999988888888888776532 56777766542 2445
Q ss_pred EEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--
Q 040324 243 MVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-- 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-- 317 (488)
++++ ...+++|.+.+ +++|+++|+++|+++|+||+|. .+-..+..........++...++++||||++|.+|
T Consensus 172 v~l~-~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 248 (404)
T PRK09265 172 IVII-NPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYD--KILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR 248 (404)
T ss_pred EEEE-CCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhh--hccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc
Confidence 5555 55888998888 8999999999999999999998 44322221112222323334577899999999888
Q ss_pred -cEEEe--CHH----HHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHH---HHHHHHHHHHHHHHHHh
Q 040324 318 -GYIAG--SKE----LIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQK---LARIRENSNFFRSKLQK 387 (488)
Q Consensus 318 -g~i~~--~~~----~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~---~~~~~~~~~~l~~~L~~ 387 (488)
||++. +++ +++.+..... ...+ .+.+...++.++|... +...+. .+++.++.+.+.+.|++
T Consensus 249 iG~~v~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~~~~r~~~~~~L~~ 319 (404)
T PRK09265 249 VGWMVLSGPKKHAKGYIEGLDMLAS-MRLC--ANVPAQHAIQTALGGY------QSINELILPGGRLYEQRDRAWELLNA 319 (404)
T ss_pred eEEEEEeCchHHHHHHHHHHHHHhc-cccC--CCcHHHHHHHHHhcCc------hhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99985 443 3333332211 1122 5555555555555311 011122 24567778888899988
Q ss_pred C-CCeecCCCCCCeEEEEeCCc-----chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 388 M-GFEVLGDNDSPVMPIMVYNP-----AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 388 ~-g~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
. |+.+..+.++.++++.+... .....+.+.|.++||.+.+.. .+.....+++|+++ ..+++++++++++|.
T Consensus 320 ~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~-~F~~~~~~~~Ri~~--~~~~e~l~~~l~rl~ 396 (404)
T PRK09265 320 IPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGT-GFNWPEPDHFRIVT--LPRVDDLEEAIGRIG 396 (404)
T ss_pred CCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECch-hhCCCCCCeEEEEe--CCCHHHHHHHHHHHH
Confidence 7 77777677778888777542 123346667778899998722 11122357999998 468999999999999
Q ss_pred HHHHHh
Q 040324 462 RIGDLV 467 (488)
Q Consensus 462 ~~~~~~ 467 (488)
++++..
T Consensus 397 ~~l~~~ 402 (404)
T PRK09265 397 RFLSGY 402 (404)
T ss_pred HHHHHh
Confidence 988654
No 192
>PRK07550 hypothetical protein; Provisional
Probab=99.94 E-value=2.4e-23 Score=210.47 Aligned_cols=332 Identities=15% Similarity=0.130 Sum_probs=223.3
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCCcH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGMGY 171 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sGs 171 (488)
++..+||++++. .+. .++.+.+++.+.+.. .. . ..++......+|++.++++++. ++.+++++|+
T Consensus 28 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~-~~-~----~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 99 (386)
T PRK07550 28 DGPLIDLSQAVP-GYP-PPPELLRALAEAAAD-PA-A----HLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGC 99 (386)
T ss_pred CCCeEEeCCCCC-CCC-CCHHHHHHHHHHHhC-cC-C----cCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCc
Confidence 566899875442 111 134555555555432 11 1 1112222336777777777642 3566777765
Q ss_pred -HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 172 -VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 172 -~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
++...++.++.++||.|+++.|.|..+...++..|.+++.++.+ |++++++.+++ ..+++
T Consensus 100 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~------------~~~~v 167 (386)
T PRK07550 100 NQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP------------RTRAI 167 (386)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc------------cCcEE
Confidence 45677778888999999999999999988889999999888853 56778877754 14555
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCC-CCCCccEEEcccccccCCcc--
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGV-DTSDVDIMMGTFSKSFGSYG-- 317 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v-~p~~~di~~~t~sK~~g~~G-- 317 (488)
+++. ..+++|.+.+ +++|+++|++||+++|+||+|+ .+...+......+.. +.++..+++.||||.+|.+|
T Consensus 168 ~~~~-P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 168 ALVT-PNNPTGVVYPPELLHELYDLARRHGIALILDETYR--DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EEeC-CCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch--hhccCCCCCcchhhCCCccccEEEEecchhhccCcccc
Confidence 5554 4678887775 8899999999999999999998 443222111111111 12334678899999998666
Q ss_pred -cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC
Q 040324 318 -GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD 395 (488)
Q Consensus 318 -g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 395 (488)
||+++++++++.+.........+ .+...+.++...++.+ .++.++.+++++++.+.+.+.|++. ++.+. +
T Consensus 245 iG~i~~~~~~~~~~~~~~~~~~~~--~s~~~q~~~~~~l~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~ 316 (386)
T PRK07550 245 VGAVVASPARIAEIEKFMDTVAIC--APRIGQIAVAWGLPNL-----ADWRAGNRAEIARRRDAFRAVFARLPGWELL-A 316 (386)
T ss_pred eEeeecCHHHHHHHHHHHhhcccC--CCcHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-C
Confidence 99999999988887654432222 4555555555555432 1245667788899999999999886 55543 4
Q ss_pred CCCCeEEEEeCC-cchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 396 NDSPVMPIMVYN-PAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 396 ~~~~~~~~~~~~-~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.++.++++.+.. ..+..+++++|++ +||.+.+... +...+.+++||+++ ..+++++++++++|.++
T Consensus 317 ~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~-f~~~~~~~iRis~~-~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 317 SGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTM-FGPGQEGYLRLAFA-NADVAGIGELVERLRAF 384 (386)
T ss_pred CceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchh-hCCCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence 456677776654 4567789998865 6999997332 12233578999994 45799999999999764
No 193
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.93 E-value=4.9e-23 Score=206.56 Aligned_cols=315 Identities=15% Similarity=0.163 Sum_probs=220.8
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCC----eEEeCCcHHHHhhhhhcccCCCcE-EEEe
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPA----AIVFGMGYVTNSSILPVLMGKGSL-IISD 191 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~----~i~~~sGs~a~~~~~~~~~~~~~~-Vl~~ 191 (488)
|-.+.+++.+++...-. . + .....+..+++++.++++++.+. ++++++|++++..++..+..+++. |+..
T Consensus 11 p~~~~~~v~~~~~~~~~-~---~-~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~ 85 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDWC-T---W-DSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVI 85 (363)
T ss_pred CCCCCHHHHHHhCCCCC-C---C-ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEe
Confidence 45677788877655321 1 1 11244566889999999999752 455677888888877777666665 5556
Q ss_pred CCCchHH-HHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHH
Q 040324 192 SLNHNSI-VNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITI 265 (488)
Q Consensus 192 ~~~h~~~-~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l 265 (488)
..+|+.. ...++..|.+++.++.+ |++++++.+++. + +..++.+..+.+.+|.+.|+++|.++
T Consensus 86 ~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~----------~-~~~~v~~~~~~~~tG~~~~i~~I~~l 154 (363)
T TIGR02326 86 NGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAAD----------P-AITHIALVHCETTTGILNPIEAVAKL 154 (363)
T ss_pred CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhC----------C-CccEEEEEeecCCccccCcHHHHHHH
Confidence 6677664 34567778888877753 788898887652 1 12244455566788999999999999
Q ss_pred HHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC-Ccc-cEEEeCHHHHHHHHhhCC--------
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-SYG-GYIAGSKELIQYLKYNCP-------- 335 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-~~G-g~i~~~~~~~~~~~~~~~-------- 335 (488)
|++||+++++|++|++|... .++...++|++++|++|+++ .+| |+++.+++.++.+.....
T Consensus 155 ~~~~g~~livD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 225 (363)
T TIGR02326 155 AHRHGKVTIVDAMSSFGGIP---------IDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYD 225 (363)
T ss_pred HHHcCCEEEEEccccccCcc---------cchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHH
Confidence 99999999999999855432 22333456899999999984 567 999999888776532111
Q ss_pred ----------CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC--CCCe-EE
Q 040324 336 ----------AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN--DSPV-MP 402 (488)
Q Consensus 336 ----------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~-~~ 402 (488)
...|+ .++....+..++++.+..+ ...+++.++++++.+++++.|+++|+.+..+. .++. .+
T Consensus 226 ~~~~~~~~~~~~~ft--~~~~~~~al~~al~~l~~~---g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~ 300 (363)
T TIGR02326 226 QWRCMEDNHGKWRFT--SPTHVVHAFAQALLELEKE---GGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITS 300 (363)
T ss_pred HHHHHhccCCCCCCC--CcHHHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEE
Confidence 11233 5666667777778776321 12456788999999999999999998775432 3444 34
Q ss_pred EEeCCc--chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 403 IMVYNP--AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 403 ~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+.+... ....++.+.|.++||.+.+.. ....+.+|+++...+|.+|+++++++|++++.
T Consensus 301 ~~~~~~~~~~~~~v~~~L~~~gi~v~~g~----~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 301 FYSPEDPDYRFADFYQRLKEQGFVIYPGK----VSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EECCCCCCCCHHHHHHHHHHCCEEEECCc----CCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 444432 355688999999999998522 12247899998777899999999999988753
No 194
>PRK06855 aminotransferase; Validated
Probab=99.93 E-value=1.4e-23 Score=214.55 Aligned_cols=338 Identities=16% Similarity=0.133 Sum_probs=216.1
Q ss_pred cceeEEecccccc--CCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCC
Q 040324 99 VSRCLNLGSYNYL--GFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGM 169 (488)
Q Consensus 99 g~~~ld~~s~~~l--g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~s 169 (488)
|+.+++++-+++. ++. .++.+.+++.+.+.+. .. ..|+......+|++.+|+++.. ++.+++++
T Consensus 31 g~~~~~~~~G~p~~~~~~-~p~~~~~a~~~~~~~~-~~-----~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~ 103 (433)
T PRK06855 31 GVKITWENIGDPIAKGEK-IPDWMKEIVAELVMDD-KS-----YGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFN 103 (433)
T ss_pred cccccccccCCCcccCCC-CCHHHHHHHHHHhhcC-CC-----CCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcC
Confidence 5566776522221 122 2455666777666441 11 1122233347899999998732 24577777
Q ss_pred cHHHH-hhhhhcccCCCcEEEEeCCCchHHHHHH-HhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 170 GYVTN-SSILPVLMGKGSLIISDSLNHNSIVNGA-RGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 170 Gs~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~-~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
|+... ..++ .++.+||.|+++.|+|+.+.... ...|.+++.++.+ |+++|++.+... +..
T Consensus 104 G~~~al~~~~-~l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~----------~~~ 172 (433)
T PRK06855 104 GLGDAIAKIY-GLLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYN----------PSI 172 (433)
T ss_pred cHHHHHHHHH-HhcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcC----------CCc
Confidence 76655 4444 47889999999999999865442 3457777766532 678888877531 124
Q ss_pred eEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc
Q 040324 241 KIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
++++++ ...+++|.+.+ +++|+++|++||++||+||+|. .+-..+........+.++...|+++||||.++.+|
T Consensus 173 ~~i~l~-~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~--~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pG 249 (433)
T PRK06855 173 AGILLI-NPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYN--NIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPG 249 (433)
T ss_pred eEEEEE-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--ccccCCCCCCCHHHHcCcCCeEEEecCccccCCCc
Confidence 556666 45788898776 7888999999999999999998 44333322222222333333588999999999888
Q ss_pred ---cEEEeC-----H---HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH
Q 040324 318 ---GYIAGS-----K---ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ 386 (488)
Q Consensus 318 ---g~i~~~-----~---~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (488)
||++++ + ++++.+..... ... +.+.+.+.++.+.|+ +....++.++.++.++++.+.+.+.|+
T Consensus 250 lRiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~Q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~L~ 323 (433)
T PRK06855 250 SRCGWIEVYNADKDEVFKKYINSILNAKM-IEV--CSTTLPQMAIPRIMS---HPEYKNYLKERNKRYEKRSNIAYEKLK 323 (433)
T ss_pred ceEEEEEEeCCchhhHHHHHHHHHHHhhc-ccc--CCChHHHHHHHHhhc---CCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999872 2 23333332222 112 245555555545543 211123567788889999999999998
Q ss_pred hC-CCeecCCCCCCeEEEEeCCcc---------------------------hHHHHHHHHH-HCCceEEeecCCCccCCC
Q 040324 387 KM-GFEVLGDNDSPVMPIMVYNPA---------------------------KVSSFSRECL-KQNVAIVTVGFPATPLLL 437 (488)
Q Consensus 387 ~~-g~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~ 437 (488)
+. |+.+..+.++.++|+.+.... ...+++..++ ++||.+.|.. .+.+. .
T Consensus 324 ~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~-~F~~~-~ 401 (433)
T PRK06855 324 DVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLS-SFCTE-L 401 (433)
T ss_pred cCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCC-cCCCC-C
Confidence 86 766666767788888775421 2346666654 5599999732 12222 2
Q ss_pred CeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 438 ARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 438 ~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+.+||++.. .++++|++++++|.+++++
T Consensus 402 ~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 402 NGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred CceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 459999954 5899999999999999875
No 195
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.9e-23 Score=209.88 Aligned_cols=296 Identities=18% Similarity=0.194 Sum_probs=204.5
Q ss_pred hHHHHHHHHHHHhC-----C-CCeEEeCC-cHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----
Q 040324 147 LHNELEECVARFVG-----K-PAAIVFGM-GYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---- 215 (488)
Q Consensus 147 ~~~~l~~~la~~~g-----~-~~~i~~~s-Gs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~---- 215 (488)
...++++.++++++ . .+.+++++ |+++...++..+..+|+.|+++.|.|+.+...++..|.+++.++.+
T Consensus 67 g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g 146 (397)
T PRK07568 67 GIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEG 146 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccC
Confidence 34789999999873 2 23455554 5555666777778999999999999988887788889998888742
Q ss_pred ----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCC
Q 040324 216 ----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTG 288 (488)
Q Consensus 216 ----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g 288 (488)
+++++++.+.+ ..+++ ++....+++|.+.+ +++|.++|+++|+++|+||+|. .+...+
T Consensus 147 ~~~~~~~~l~~~~~~------------~~~~v-~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~--~~~~~~ 211 (397)
T PRK07568 147 FHLPSKEEIEKLITP------------KTKAI-LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYR--EFVYDG 211 (397)
T ss_pred CCCCCHHHHHHhcCc------------cceEE-EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccch--hcccCC
Confidence 24566655532 14444 44455778898775 7899999999999999999998 554444
Q ss_pred CCcchhcCCCC-CCccEEEcccccccCCcc---cEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCC
Q 040324 289 RGVCELLGVDT-SDVDIMMGTFSKSFGSYG---GYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDG 363 (488)
Q Consensus 289 ~~~~~~~~v~p-~~~di~~~t~sK~~g~~G---g~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~ 363 (488)
........+.. .+..+++.||||.+|.+| ||++++ +++++.+...... .++ .+.+.+.++.+.|+. .
T Consensus 212 ~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~--~s~~~q~~~~~~l~~-----~ 283 (397)
T PRK07568 212 LKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQA-RLS--PPTLEQIGAAALLDT-----P 283 (397)
T ss_pred CCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhc-cCC--CCcHHHHHHHHHhhC-----C
Confidence 32222222221 234688999999999777 999874 7888776543321 222 555555555555542 1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcchHHHHHHHHHH------CCceEEeec-CCCcc-
Q 040324 364 SCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLK------QNVAIVTVG-FPATP- 434 (488)
Q Consensus 364 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gi~v~~~~-~~~~~- 434 (488)
.++.++.++.++++.+.+.+.|++. ++.+..+.++.++++.+... ...++.+.|++ +||.+.|.. |...+
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~ 362 (397)
T PRK07568 284 ESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPASGFYATPG 362 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCchHhcCCCC
Confidence 2356677888899999999999887 66666566666667766532 45678888876 599999732 21111
Q ss_pred CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 435 LLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 435 ~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.+.+++||++. .+++++++++++|.++++++.
T Consensus 363 ~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 363 LGKNEIRIAYV--LNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred CCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHhh
Confidence 23479999984 578999999999999987754
No 196
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.93 E-value=3.8e-23 Score=204.23 Aligned_cols=300 Identities=14% Similarity=0.149 Sum_probs=210.2
Q ss_pred ceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 100 SRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 100 ~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
.+++|+++| |+++... +.+.+ +.+..|.. +. .+|++.+|++++.+ .|++++|+.....++
T Consensus 20 ~~~i~l~~ne~p~~~~~--~~~~~---~~~~~yp~---------~~----~~Lr~~ia~~~~~~-~I~it~Gs~~al~~~ 80 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPV--PAIPA---DAWARLPE---------TD----DGLEAAARAYYGAP-QLLPVAGSQAAIQAL 80 (330)
T ss_pred HHheeecCCcCCCCCCC--cccCH---HHHHhCCC---------Ch----HHHHHHHHHHhCCC-CEEECcCHHHHHHHH
Confidence 357999877 6655542 22322 33444311 11 68999999999975 566777776553333
Q ss_pred hcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC
Q 040324 179 PVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK 258 (488)
Q Consensus 179 ~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~ 258 (488)
. .+.+||.|+++.|+|+.+...++..|++++.++. +++++.+.+ .++++++.| .+++|.+.+
T Consensus 81 ~-~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~---~~~~~~~~~-------------~~~v~l~nP-~NPTG~~~s 142 (330)
T PRK05664 81 P-RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE---AEVEAALDS-------------LDVLVVVNP-NNPTGRRFD 142 (330)
T ss_pred H-HccCCCEEEEcCCChHHHHHHHHHcCCeEEEech---hhHhhhhcC-------------CCEEEEeCC-cCCCCCccC
Confidence 2 3579999999999999999999999999999874 345544432 445566644 688898886
Q ss_pred ---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHh
Q 040324 259 ---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKY 332 (488)
Q Consensus 259 ---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~ 332 (488)
+++|+++|+++|+++|+||+|. .+.+. .... ...+.+..++++||||++|.+| ||+++++++++.+..
T Consensus 143 ~~~l~~l~~~~~~~~~~iI~DE~y~--~~~~~-~s~~---~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~ 216 (330)
T PRK05664 143 PARLLAWHARLAARGGWLVVDEAFM--DNTPQ-HSLA---ACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAE 216 (330)
T ss_pred HHHHHHHHHHHHhcCCEEEEECCcc--cCCCc-cccc---ccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHH
Confidence 6677777899999999999997 44321 1122 2223344688999999999888 999999999998876
Q ss_pred hCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC--CeEEEEeCCcch
Q 040324 333 NCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS--PVMPIMVYNPAK 410 (488)
Q Consensus 333 ~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~--~~~~~~~~~~~~ 410 (488)
.... ++ .+.+...++.++|+.. ...+..+++++++.+++.+.|++.|+.. .++ .++++.. + .
T Consensus 217 ~~~~--~~--~~~~~~~~~~~~L~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~---~~~~~~f~~~~~--~-~ 280 (330)
T PRK05664 217 LLGP--WT--VSGPTRWLAQAALADT------PWQRRQRERLLAASQRLAALLRRHGLTP---AGGCALFQWVRT--E-D 280 (330)
T ss_pred hcCC--CC--CCHHHHHHHHHHHhCh------HHHHHHHHHHHHHHHHHHHHHHHCCCcc---cCCcceEEEEec--C-C
Confidence 5442 22 4566666666666532 1345678888999999999999987643 233 3334333 2 4
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
..++.+.|.++||.+..++ ..+++||+++ .+++++++++++|+++.++
T Consensus 281 ~~~~~~~l~~~gi~v~~f~------~~~~iRis~~--~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 AAALHEFLARRGILTRLFE------QPASLRFGLP--ADEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHCCeEEEECC------CCCeEEEECC--CCHHHHHHHHHHHHHHHhh
Confidence 6789999999999998432 1368999984 3788999999999887654
No 197
>PRK03321 putative aminotransferase; Provisional
Probab=99.93 E-value=8.9e-24 Score=211.02 Aligned_cols=314 Identities=16% Similarity=0.184 Sum_probs=224.5
Q ss_pred eeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hhhh
Q 040324 101 RCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SSIL 178 (488)
Q Consensus 101 ~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~~~ 178 (488)
.++||+++.. .++ .++.+.+++.+.+.... .+ + .....++++.+|++++.+ +.+++++|+.+. ..++
T Consensus 23 ~~i~l~~~~~-~~~-~~~~~~~a~~~~~~~~~-~y-------~-~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~ 91 (352)
T PRK03321 23 GAIKLSSNET-PFG-PLPSVRAAIARAAAGVN-RY-------P-DMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLV 91 (352)
T ss_pred cceeccCCCC-CCC-CCHHHHHHHHHHHHhcC-cC-------C-CCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHH
Confidence 4788875422 232 23577777777665431 11 1 123479999999999865 467788888875 5566
Q ss_pred hcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCC
Q 040324 179 PVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSME 253 (488)
Q Consensus 179 ~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~ 253 (488)
..+.++|+.|+++.+.|..+...++..|.+++.++.+ |++++++.+++ ..+++++ ..+.+++
T Consensus 92 ~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~------------~~~~v~l-~~p~NPt 158 (352)
T PRK03321 92 QATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD------------RTRLIFV-CNPNNPT 158 (352)
T ss_pred HHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc------------CCCEEEE-eCCCCCc
Confidence 7778999999999999988887888889998888764 57777766643 2444454 4778999
Q ss_pred CCCCChHHHHHHHHH--cCcEEEEEccccccccCCCCCC--cchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHH
Q 040324 254 GELCKLPEIITICKR--YKAYTYLDEAHSIGAVGKTGRG--VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKEL 326 (488)
Q Consensus 254 G~~~~l~~l~~l~~~--~g~~li~DE~~s~g~~g~~g~~--~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~ 326 (488)
|.+.+.+++.++|++ +++++|+||+|. .+...+.. ..... ++.+..++++||||.||.+| ||+++++++
T Consensus 159 G~~~~~~~l~~l~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~--~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~ 234 (352)
T PRK03321 159 GTVVTPAELARFLDAVPADVLVVLDEAYV--EYVRDDDVPDGLELV--RDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEV 234 (352)
T ss_pred CCCcCHHHHHHHHHhCCCCeEEEEechHH--HhccCcCCCcHHHHH--hhCCCEEEEecchHHhhhHHHhhhhhcCCHHH
Confidence 999999999999987 599999999998 44332221 11222 22334688899999999877 999999999
Q ss_pred HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeC
Q 040324 327 IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVY 406 (488)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~ 406 (488)
++.+..... .+ +.+++.+.++.++|.... ...+..+++.++.+.+.+.|++.|+.+.. .+++++++.+.
T Consensus 235 ~~~~~~~~~--~~--~~s~~~q~~a~~~l~~~~------~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~~g~~i~i~l~ 303 (352)
T PRK03321 235 IAALRKVAV--PF--SVNSLAQAAAIASLAAED------ELLERVDAVVAERDRVRAALRAAGWTVPP-SQANFVWLPLG 303 (352)
T ss_pred HHHHHHhcC--CC--CCCHHHHHHHHHHhcCHH------HHHHHHHHHHHHHHHHHHHHHHCCCccCC-CCCCEEEEeCC
Confidence 999886532 23 367777777777764221 23444555666667889999988876543 45677777663
Q ss_pred CcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 407 NPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
....++++.|.++||.+.++ +.+.+||++ .+.+++++++++|+++++
T Consensus 304 --~~~~~~~~~l~~~gI~v~~~-------~~~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 304 --ERTADFAAAAAEAGVVVRPF-------AGEGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred --CCHHHHHHHHHHCCEEEEcc-------CCCcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 24668999999999999852 124699997 689999999999998754
No 198
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.93 E-value=1.2e-23 Score=215.12 Aligned_cols=337 Identities=17% Similarity=0.162 Sum_probs=228.8
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCC--CChhhHHHHHHHHHHHhCCC--CeEEeCCc-HHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDG--GTLALHNELEECVARFVGKP--AAIVFGMG-YVT 173 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~--g~~~~~~~l~~~la~~~g~~--~~i~~~sG-s~a 173 (488)
+.-|||.++ .+..++.+.+++.+.+.++........... -..+..+++++.++++++.+ +.+++++| +++
T Consensus 32 ~~iyLd~a~-----~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 106 (424)
T PLN02855 32 KLVYLDNAA-----TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEA 106 (424)
T ss_pred CeEEeeCcc-----ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHH
Confidence 346677543 233356788888887776533221101000 01234578999999999973 45555555 445
Q ss_pred Hhhhhhc----ccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 174 NSSILPV----LMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 174 ~~~~~~~----~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+..++.. ..++|+.|++..+.|++.... ++..|.+++.++.+ |++++++.+++ +
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~~-------------~ 173 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLSE-------------K 173 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhcc-------------C
Confidence 4444443 357899999999999876433 34568888888753 67777777753 3
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GY 319 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~ 319 (488)
+.+|++..+.+++|.+.|+++|.++|+++|+++++|++|+.|... .++...++|+++.|++|.+|..| |+
T Consensus 174 t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~---------~~~~~~~~d~~~~s~~K~~gp~G~G~ 244 (424)
T PLN02855 174 TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMP---------VDVQTLGADFLVASSHKMCGPTGIGF 244 (424)
T ss_pred ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcC---------CCchhcCCCEEEeecccccCCCccEE
Confidence 346677889999999999999999999999999999999754321 23333446899999999877767 99
Q ss_pred EEeCHHHHHHHHhhCCCC------------------ccc-CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHH
Q 040324 320 IAGSKELIQYLKYNCPAH------------------LYA-TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNF 380 (488)
Q Consensus 320 i~~~~~~~~~~~~~~~~~------------------~~~-~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (488)
++.++++++.+.....+. .+. .+.+....++..++++.+... ..++..++..+..++
T Consensus 245 l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~----g~~~i~~~~~~l~~~ 320 (424)
T PLN02855 245 LWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEI----GMDRIHEYEVELGTY 320 (424)
T ss_pred EEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHH
Confidence 999988877654321000 011 123445556666777776421 456778888999999
Q ss_pred HHHHHHhC-CCeecCCCC------CCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCc-----cCCCCeEEEeecCC
Q 040324 381 FRSKLQKM-GFEVLGDND------SPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPAT-----PLLLARARICISAS 447 (488)
Q Consensus 381 l~~~L~~~-g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~-----~~~~~~iRi~~~~~ 447 (488)
+++.|+++ |+.+.++.. ++++.+.+. .....++.+.|.++ ||.+....+... ....+.+|++++..
T Consensus 321 l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~y 399 (424)
T PLN02855 321 LYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVE-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFY 399 (424)
T ss_pred HHHHHhcCCCEEEeCCCcccccCcccEEEEEEC-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccC
Confidence 99999887 777775422 345555543 23456788999888 999884221110 01135799999999
Q ss_pred CCHHHHHHHHHHHHHHHHHh
Q 040324 448 HTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 448 ~t~edid~~l~~l~~~~~~~ 467 (488)
+|++|+|+++++|+++++.+
T Consensus 400 nt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 400 NTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998775
No 199
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.93 E-value=1.2e-23 Score=213.48 Aligned_cols=339 Identities=18% Similarity=0.153 Sum_probs=220.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh---CC-CCeEEeCCcHHHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV---GK-PAAIVFGMGYVTN 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g~-~~~i~~~sGs~a~ 174 (488)
+..++|++.++. .++ .++.+.+++.+.+++...... ...++......+|++.+|+++ +. ++.+++++|+...
T Consensus 32 ~~~~i~l~~~~~-~~~-~~~~v~~~~~~~~~~~~~~~~--~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~a 107 (402)
T TIGR03542 32 SADIIRLGIGDT-TQP-LPASVIEAFHNAVDELASEET--FRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCD 107 (402)
T ss_pred CCCeEEcCCCCC-CCC-CCHHHHHHHHHHHhccccccc--ccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHH
Confidence 466788874432 111 246677888877765321100 011223334478999999976 32 3577788887765
Q ss_pred hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCC-----------eEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 175 SSILPVLMGKGSLIISDSLNHNSIVNGARGSGA-----------TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 175 ~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~-----------~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
..++..+..+|+.|+++.|+|..+...++..|. ++..++.+.-+.+...+.+. ...+++
T Consensus 108 l~~l~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~i 177 (402)
T TIGR03542 108 VFRLQSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE----------PKIDII 177 (402)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc----------CCceEE
Confidence 444455668899999999999999999999998 87777653211111111110 124566
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC-CCccEEEcccccccCCcc--
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT-SDVDIMMGTFSKSFGSYG-- 317 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p-~~~di~~~t~sK~~g~~G-- 317 (488)
+++ ..++++|.+.+ +++|+++|++||++||+||+|. .+-..+........++. .+..|+++||||.+|.+|
T Consensus 178 ~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~--~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlR 254 (402)
T TIGR03542 178 YLC-SPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYS--AFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVR 254 (402)
T ss_pred EEe-CCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhh--hhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcc
Confidence 665 77899998887 8899999999999999999998 44322211111222222 234677899999999888
Q ss_pred -cEEEeCHHHH--------HHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 318 -GYIAGSKELI--------QYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 318 -g~i~~~~~~~--------~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
||++++++++ ..+..... ..+. +.+.+...++.+.+.. . ......+.++.++++.+.+.+.|++.
T Consensus 255 iG~~i~~~~l~~~~~~~~~~~~~~~~~-~~~~-~~s~~~q~~~~~~l~~---~-~~~~~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 255 LGWTVVPKELTYADGHSVIQDWERRQC-TKFN-GASYPVQRAAEAAYAG---E-GLQPILEAISYYMENARILRKALEAA 328 (402)
T ss_pred eEEEEecHHHhhcchhhHHHHHHHHhh-hccc-CCCHHHHHHHHHHHcC---c-chhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998876 22211111 1121 2445554444444321 1 11134456677888899999999988
Q ss_pred CCeecCCCCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 389 GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
|+.+..+.+++++++.+.......++.+.|++ +||.+.+.. .+...+.+++||+. ..+++++++++++|+++
T Consensus 329 ~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~-~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 GFKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGS-GFGPSGEGFVRFSA--FGKRENIVEACERIKEA 401 (402)
T ss_pred CceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCch-hhCCCCCCEEEEEe--cCCHHHHHHHHHHHHhh
Confidence 88776655678888888665556789999885 599999732 12233457999996 45899999999999775
No 200
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=2.8e-23 Score=207.76 Aligned_cols=334 Identities=20% Similarity=0.238 Sum_probs=237.0
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCC--CcccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHH-H
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTC--SSRVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVT-N 174 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a-~ 174 (488)
--|+|.+ +.++.|..+.+++.+....+..+.. ......-.+...++.++.+|++++.+ +.|++++|++. .
T Consensus 23 ~vylD~a-----a~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~al 97 (405)
T COG0520 23 LVYLDNA-----ATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEAL 97 (405)
T ss_pred eEEecCc-----ccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHH
Confidence 4566654 3333567888888888776543322 11111112446689999999999975 56777766664 4
Q ss_pred hhhhhcc---cCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 175 SSILPVL---MGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 175 ~~~~~~~---~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
..++..+ ..+||.|++....|++.... .+..|++++.++.+ +++++++.+.+ ++.
T Consensus 98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~-------------~Tk 164 (405)
T COG0520 98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP-------------KTK 164 (405)
T ss_pred HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC-------------Cce
Confidence 5555555 58889999999999987655 33458889888854 57777775543 455
Q ss_pred EEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cc-cEE
Q 040324 243 MVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YG-GYI 320 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~G-g~i 320 (488)
+|.+..+.+..|.+.|+++|.++|+++|+++++|.+|+++.+. .+++..++|++..|.+|++.+ .| |++
T Consensus 165 lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~---------idv~~l~~Df~afsgHKwl~gP~GiGvL 235 (405)
T COG0520 165 LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLP---------IDVQELGCDFLAFSGHKWLLGPTGIGVL 235 (405)
T ss_pred EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccC---------CCchhcCCCEEEEcccccccCCCceEEE
Confidence 7888899999999999999999999999999999999965543 455566789999999996654 47 999
Q ss_pred EeCHHHHHHHHhhCCC------------Ccc--------cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHH
Q 040324 321 AGSKELIQYLKYNCPA------------HLY--------ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNF 380 (488)
Q Consensus 321 ~~~~~~~~~~~~~~~~------------~~~--------~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~ 380 (488)
.+++++.+.+.+...+ .++ ..+.+.....+..++++.++.. ..+++.++.+++.++
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~i----g~~~i~~~e~~L~~~ 311 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEI----GMEAIEAHERELTEY 311 (405)
T ss_pred EEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHH----hHHHHHHHHHHHHHH
Confidence 9999999887331110 011 0112223333344677766421 356778888999999
Q ss_pred HHHHHHhC-CCeecCCC---CCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccC-----CCCeEEEeecCCCCHH
Q 040324 381 FRSKLQKM-GFEVLGDN---DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPL-----LLARARICISASHTKE 451 (488)
Q Consensus 381 l~~~L~~~-g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-----~~~~iRi~~~~~~t~e 451 (488)
+.+.|+++ ++.+.++. ..+++.+.+.. ....++.+.|.++||.++...+.+.|. -.+.+|++++..+|+|
T Consensus 312 ~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~-~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~e 390 (405)
T COG0520 312 LLEGLSELPGVEIYGPPDADRGGIVSFNVKG-IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEE 390 (405)
T ss_pred HHHHHhcCCCeEEecCCcccCceEEEEEeCC-CCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHH
Confidence 99999988 68887765 35666555533 357789999999998887644443321 1234999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 040324 452 DLIEALEVISRIGD 465 (488)
Q Consensus 452 did~~l~~l~~~~~ 465 (488)
|||+++++|+++.+
T Consensus 391 did~l~~aL~~~~~ 404 (405)
T COG0520 391 DVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998764
No 201
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.93 E-value=2.4e-23 Score=209.64 Aligned_cols=327 Identities=16% Similarity=0.131 Sum_probs=224.4
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~ 176 (488)
++..++++.+ ++|.+.+++.+.+++.. +. +....+.....+++++.+|+++|.+ ..+++++|++++..
T Consensus 22 ~~~~~~~~~~-------~~~~~~~a~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~ 91 (373)
T TIGR03812 22 GRILGSMCTN-------PHPIAVKAYDMFIETNL-GD--PGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQ 91 (373)
T ss_pred CcEEEEEeCC-------chHHHHHHHHHHhhcCC-CC--cccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHH
Confidence 5556666531 34566777776655431 11 1223355677789999999999985 35777888888766
Q ss_pred hhhccc------CCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEE
Q 040324 177 ILPVLM------GKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVV 245 (488)
Q Consensus 177 ~~~~~~------~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi 245 (488)
++.++. ++++.|+++.+.|.++...++..|.+++.++.+ |++++++.+.+. +..+++
T Consensus 92 ~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~------------~~~vv~ 159 (373)
T TIGR03812 92 AVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDN------------TIGIVG 159 (373)
T ss_pred HHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhC------------cEEEEE
Confidence 554432 466899999999999988899999999988864 788888887641 344555
Q ss_pred EcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCc-chhcCCCCCCccEEEcccccccC-C--cccEEE
Q 040324 246 VEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGV-CELLGVDTSDVDIMMGTFSKSFG-S--YGGYIA 321 (488)
Q Consensus 246 ~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~-~~~~~v~p~~~di~~~t~sK~~g-~--~Gg~i~ 321 (488)
+.+ .+++|.+.|+++|.++|+++|+++|+|++|+.+.++....+. .....+....+|.+..+.+|... + .|++++
T Consensus 160 ~~~-~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~ 238 (373)
T TIGR03812 160 IAG-TTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILF 238 (373)
T ss_pred ECC-CCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEE
Confidence 554 577899999999999999999999999999844322110000 00011111245777778889532 2 235666
Q ss_pred eCHHHHHHHHhhCCCCccc-------CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecC
Q 040324 322 GSKELIQYLKYNCPAHLYA-------TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLG 394 (488)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~-------~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 394 (488)
.++++.+.+... ..+.+. .+.++..++++.++|+.+. .+..++..+++.+++++|++.|+++|++...
T Consensus 239 ~~~~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~----~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 313 (373)
T TIGR03812 239 RSKSYLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLG----REGYRKIVAECMENTRYLVEELKKIGFEPVI 313 (373)
T ss_pred eCHHHHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEc
Confidence 788888776432 222211 1244556777778888762 2245678899999999999999999876443
Q ss_pred CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 395 DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
++..+++.+.+.. ..++.++|.++||.+.... ..+++|++++..+|++|+|+++++|++
T Consensus 314 ~~~~~~v~~~~~~---~~~v~~~L~~~gi~v~~~~------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 314 EPVLNIVAFEVDD---PEEVRKKLRDRGWYVSVTR------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CCCceEEEEEeCC---HHHHHHHHHHCCceeccCC------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 3345555554432 4579999999999987421 236899999999999999999999975
No 202
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=2.4e-23 Score=215.02 Aligned_cols=308 Identities=15% Similarity=0.163 Sum_probs=209.7
Q ss_pred hhhHHHHHHHHHHHhCC---------CCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHH-hcCCeEEEee
Q 040324 145 LALHNELEECVARFVGK---------PAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGAR-GSGATIRVFQ 213 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~---------~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~-~~g~~v~~~~ 213 (488)
.....+|++.+|++++. ++.|++++|+.. +..++.+++++||.|+++.|+|+.+...++ ..|.+++.++
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~ 172 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVP 172 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEe
Confidence 33447888888888751 246667776664 578888999999999999999999988777 4799999988
Q ss_pred CC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccc
Q 040324 214 HN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGA 283 (488)
Q Consensus 214 ~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~ 283 (488)
.. |++++++.++.....+ ...++++++ ...+++|.+.+ +++|+++|++|+++||+||+|....
T Consensus 173 ~~~~~~~~~~~~~le~a~~~a~~~~------~~~k~l~l~-nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 173 CSSSDNFKLTVDAADWAYKKAQESN------KKVKGLILT-NPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CCCCccCcCCHHHHHHHHHHHHhcC------CCeeEEEEc-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 62 5788877665432211 124555554 67888998886 7888999999999999999998433
Q ss_pred cCCC-CCCcchhcC-CCC----CCccEEEcccccccCCcc---cEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHH
Q 040324 284 VGKT-GRGVCELLG-VDT----SDVDIMMGTFSKSFGSYG---GYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 284 ~g~~-g~~~~~~~~-v~p----~~~di~~~t~sK~~g~~G---g~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a 353 (488)
|... -....+... .+. .+..+++.||||.||.+| ||+++ ++.+.+.++.... ++ ..+.+.+.++.+
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~---~~-~vs~~~Q~a~~~ 321 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSS---FG-LVSSQTQLMLAS 321 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhh---cC-CCCHHHHHHHHH
Confidence 3211 111122210 011 123356789999999888 99998 4666666554332 22 144454444444
Q ss_pred HHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcc-------hHHHHHHHHHHC-Cce
Q 040324 354 AIQVVIGEDG-SCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPA-------KVSSFSRECLKQ-NVA 424 (488)
Q Consensus 354 ~L~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~-Gi~ 424 (488)
.|+ +... .....+.+++++++.+.+.+.|++.|+.+..+.++.++|+.+.... ...++++.++++ ||.
T Consensus 322 ~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~ 398 (496)
T PLN02376 322 MLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLN 398 (496)
T ss_pred HhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEE
Confidence 432 1111 1134455777888899999999998888777777788888774321 235788888876 999
Q ss_pred EEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 425 IVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 425 v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+.|.. .+.....+++|||+. ..++++++.++++|.+++++..
T Consensus 399 v~pGs-~F~~~~~g~~Ri~fa-~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 399 VSPGS-SFRCTEPGWFRICFA-NMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred EeCcc-ccCCCCCCEEEEEee-CCCHHHHHHHHHHHHHHHHHhh
Confidence 99732 222223579999994 3678999999999999987543
No 203
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=9e-23 Score=203.46 Aligned_cols=316 Identities=16% Similarity=0.192 Sum_probs=223.4
Q ss_pred eEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hhhhh
Q 040324 102 CLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SSILP 179 (488)
Q Consensus 102 ~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~~~~ 179 (488)
.++|.++.. .++ .++.+.+++.+.+...... .+. .+...++++.+|++++.+ +.+++++|+... ..++.
T Consensus 24 ~~~l~~~~~-~~~-~p~~~~~a~~~~~~~~~~~------~y~-~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~ 94 (351)
T PRK14807 24 KYKMDANET-PFE-LPEEVIKNIQEIVKSSQVN------IYP-DPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIML 94 (351)
T ss_pred eeEccCCCC-CCC-CCHHHHHHHHHHhhcCccc------CCC-CccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHH
Confidence 356654322 222 2467777777766432111 111 122478999999999874 577788887764 66777
Q ss_pred cccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 180 VLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 180 ~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
+++++||.|+++.|+|..+...++..|++++.++.+ |++++++.+... ..++++++ ...+++|
T Consensus 95 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~-----------~~k~v~l~-~p~NPtG 162 (351)
T PRK14807 95 AFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKY-----------QPKLVFLC-NPNNPTG 162 (351)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhcc-----------CCCEEEEe-CCCCCCC
Confidence 788999999999999998888888899999888753 577777776531 24555554 7789999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHH
Q 040324 255 ELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLK 331 (488)
Q Consensus 255 ~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~ 331 (488)
...+.+++.++|++++.++|+||+|. .+. +.......+ ..+..|+++||||.+|.+| ||+++++++++.+.
T Consensus 163 ~~~~~~~l~~l~~~~~~~~ivDe~y~--~~~--~~~~~~~~~--~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~ 236 (351)
T PRK14807 163 SVIEREDIIKIIEKSRGIVVVDEAYF--EFY--GNTIVDVIN--EFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLN 236 (351)
T ss_pred CCCCHHHHHHHHHhCCCEEEEeCcch--hhc--ccchHHHhh--hCCCEEEEecchHhcccchhceeeeecCHHHHHHHH
Confidence 99999999999999999999999997 442 222212121 2345789999999999888 99999999999887
Q ss_pred hhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcch
Q 040324 332 YNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPAK 410 (488)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 410 (488)
..... +. .+++.+.++.+.|+.- ..++..++++++.+.+.+.|++. |+.+. +.+++++++.+. .
T Consensus 237 ~~~~~--~~--~~~~~q~~~~~~l~~~-------~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~---~ 301 (351)
T PRK14807 237 LVKSP--YN--INSLSQVIALKVLRTG-------VLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK---D 301 (351)
T ss_pred HccCC--CC--cCHHHHHHHHHHHhHH-------HHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC---C
Confidence 65432 22 4556555555555421 34566677788888899999876 77765 445677777664 3
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
..++++.|+++||.+.++.. .....+++||++ .+.++.++++++|++++
T Consensus 302 ~~~~~~~l~~~gV~v~~~~~--~~~~~~~iRis~---~~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 ADYVYQGLLERGILVRDFSK--VEGLEGALRITV---SSCEANDYLINGLKELL 350 (351)
T ss_pred HHHHHHHHHHCCEEEEECCC--CCCCCCeEEEEc---CCHHHHHHHHHHHHHhh
Confidence 56788899999999986331 112347899998 36888999999997753
No 204
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=1.5e-22 Score=203.51 Aligned_cols=320 Identities=16% Similarity=0.176 Sum_probs=222.7
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC---C-eEEeCCcHHHHhhhhhcccCCCcEEEEeC
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP---A-AIVFGMGYVTNSSILPVLMGKGSLIISDS 192 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~-~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~ 192 (488)
+-.+.+++.+++.... .. +. ....+...++++.+++++|.+ . .+++++|++++..++..+..+++.|++..
T Consensus 13 P~~~~~~~~~a~~~~~-~~---~~-~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~ 87 (368)
T PRK13479 13 PLTTSRTVREAMLRDW-GS---WD-DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD 87 (368)
T ss_pred CCCCCHHHHHHhCCCC-CC---CC-hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 3456677777765532 11 11 113356789999999999974 3 44567888899888888888887777655
Q ss_pred CCc-hHH-HHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHH
Q 040324 193 LNH-NSI-VNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITI 265 (488)
Q Consensus 193 ~~h-~~~-~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l 265 (488)
+.+ +.. ...++..|.++..++.+ |++++++.+++. + +..+|.+..+.+++|...|+++|.++
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~----------~-~~~~v~~~~~~~~tG~~~~~~~i~~l 156 (368)
T PRK13479 88 NGAYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAAD----------P-RITHVALVHCETTTGILNPLDEIAAV 156 (368)
T ss_pred CCchHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhC----------C-CCcEEEEEcccCccccccCHHHHHHH
Confidence 544 333 35567778888888753 688888877641 1 22345556677788999999999999
Q ss_pred HHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccccccc-CCcc-cEEEeCHHHHHHHHhhCCCC------
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSF-GSYG-GYIAGSKELIQYLKYNCPAH------ 337 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~-g~~G-g~i~~~~~~~~~~~~~~~~~------ 337 (488)
|+++|+++|+|++|++|... .++...++|++++|++|++ |.+| |+++.++++++.+.....++
T Consensus 157 ~~~~~~~livDa~~~~g~~~---------~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 227 (368)
T PRK13479 157 AKRHGKRLIVDAMSSFGAIP---------IDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYD 227 (368)
T ss_pred HHHcCCEEEEEcccccCCcc---------ccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHH
Confidence 99999999999888754321 2233335689999999987 5567 99999999888775432211
Q ss_pred ---------cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC--CCCe-EEEEe
Q 040324 338 ---------LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN--DSPV-MPIMV 405 (488)
Q Consensus 338 ---------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~-~~~~~ 405 (488)
....+.+....++..++++.+..+ ...++..+++.++.+++++.|+++|+.+..+. .++. ..+.+
T Consensus 228 ~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 304 (368)
T PRK13479 228 QWAYMEKTGQWRFTPPTHVVAAFYQALLELEEE---GGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHA 304 (368)
T ss_pred HHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEEC
Confidence 010135556666666777766321 12466778999999999999999998765432 2333 33333
Q ss_pred CCc--chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 406 YNP--AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 406 ~~~--~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
... .+..++.++|.++||.+.+... ...+.+|++....+|++|+++++++|++++++++
T Consensus 305 ~~~~~~~~~~l~~~L~~~gi~v~~g~~----~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 305 PADPAYDFKEFYERLKEQGFVIYPGKL----TQVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCCCcCHHHHHHHHHHCCEEEecCCC----CCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 322 3457899999999999975221 1236899987667899999999999999998765
No 205
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=6.1e-23 Score=208.59 Aligned_cols=336 Identities=13% Similarity=0.098 Sum_probs=222.2
Q ss_pred cceeEEecccccc--CCCCCCccchHHHHHHHHHcC-CCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeC
Q 040324 99 VSRCLNLGSYNYL--GFAAADEYCTPRVIDSLKKYS-HSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFG 168 (488)
Q Consensus 99 g~~~ld~~s~~~l--g~~~~~~~v~~a~~~~l~~~~-~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~ 168 (488)
++.+|+|+-+++- +.-..++.+.+++.+++++.. ..| +......+|++.+|+++.. ++.++++
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y-------~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it 103 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSY-------APTGGILPARRAIADYLSNDLPYQLSPDDVYLT 103 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCC-------CCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEe
Confidence 7888998833331 111235667788887776521 112 2222336889999998732 2456666
Q ss_pred CcHH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 169 MGYV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 169 sGs~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+|+. +...++.+++++||.|+++.|+|+.+...++..|.++..++.. |+++|+++++. .+
T Consensus 104 ~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~------------~~ 171 (409)
T PLN00143 104 LGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE------------NT 171 (409)
T ss_pred cChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc------------CC
Confidence 6655 4577888889999999999999999998899999998888642 67778776543 24
Q ss_pred eEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc
Q 040324 241 KIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
++++++. ..+++|.+.+ +++|+++|++|+++||+||+|. .+-..+........+++.+..|+++||||.|+.+|
T Consensus 172 ~~~~~~n-P~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~--~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG 248 (409)
T PLN00143 172 IAMVIIN-PGNPCGSVYSYEHLNKIAETARKLGILVIADEVYG--HIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPG 248 (409)
T ss_pred EEEEEEC-CCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcccc--ccccCCCCCcchhhhcccCcEEEEccchhhcCCCc
Confidence 5556554 4788998886 8889999999999999999998 44333322111111223334688999999999888
Q ss_pred ---cEEEeC--HHH------HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH
Q 040324 318 ---GYIAGS--KEL------IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ 386 (488)
Q Consensus 318 ---g~i~~~--~~~------~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (488)
||++++ +.+ ++.+........+ .+.+.++++.+.|+.- ..+..++.+++++++.+.+.+.|+
T Consensus 249 lRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~q~a~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~L~ 321 (409)
T PLN00143 249 WGLGWLVTCDPSGLLQICEIADSIKKALNPAPF---PPTFIQAAIPEILEKT----TEDFFSKTINILRAALAFCYDKLK 321 (409)
T ss_pred cceEEEEeeCchhhhhhHHHHHHHHHHHhccCC---CCchHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999983 333 2333322221111 2445555555555310 112456778888888888999998
Q ss_pred hCCCee--cCCCCCCeEEEEeCCc-----chHHHHHHHH-HHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHH
Q 040324 387 KMGFEV--LGDNDSPVMPIMVYNP-----AKVSSFSREC-LKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALE 458 (488)
Q Consensus 387 ~~g~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~ 458 (488)
+++... ..+.++.++|+.+... ....+++..+ .++||.+.|.. .+. ..+++||++. .++++++++++
T Consensus 322 ~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~-~f~--~~~~iRi~~~--~~~~~l~~al~ 396 (409)
T PLN00143 322 EIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGV-TVG--LKNWLRITFA--VEQSSLEDGLG 396 (409)
T ss_pred cCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCcc-ccC--CCCeEEEEEc--CCHHHHHHHHH
Confidence 875332 2344667778877521 2355666555 56799999732 121 2479999994 57999999999
Q ss_pred HHHHHHHHhC
Q 040324 459 VISRIGDLVG 468 (488)
Q Consensus 459 ~l~~~~~~~~ 468 (488)
+|.+++++..
T Consensus 397 rl~~~l~~~~ 406 (409)
T PLN00143 397 RLKSFCGRHA 406 (409)
T ss_pred HHHHHHHHhc
Confidence 9999987653
No 206
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.93 E-value=1.8e-23 Score=214.73 Aligned_cols=338 Identities=17% Similarity=0.140 Sum_probs=229.4
Q ss_pred ceeEEec-cccccCCCCCCccchHHHHHHHH-HcCCCCCCcccCCCChhhHHH----HHHHHHHHhCCC-CeEEe----C
Q 040324 100 SRCLNLG-SYNYLGFAAADEYCTPRVIDSLK-KYSHSTCSSRVDGGTLALHNE----LEECVARFVGKP-AAIVF----G 168 (488)
Q Consensus 100 ~~~ld~~-s~~~lg~~~~~~~v~~a~~~~l~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~-~~i~~----~ 168 (488)
+++||+. |-|+ ..|.+.+++...+. +|+.++.+++...|..- ..+ .++.++++++.+ +.+.+ +
T Consensus 34 ~~~l~l~~sen~-----~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~-~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~ 107 (452)
T PTZ00094 34 IEGLELIASENF-----TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEV-VDKIENLCQKRALEAFGLDPEEWGVNVQPY 107 (452)
T ss_pred HcCeeEeccccc-----CCHHHHHHhcchhhccccCCCCCccccccchH-HHHHHHHHHHHHHHHhCCCcccceeecCCC
Confidence 5678873 4333 24788888888774 56556777776666432 233 456899999975 33322 5
Q ss_pred CcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHh--------cC--CeEEEeeCC-----CHHHHHHHHHHHHhcCCC
Q 040324 169 MGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARG--------SG--ATIRVFQHN-----TPSHLEEVLREQIAEGQP 233 (488)
Q Consensus 169 sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~--------~g--~~v~~~~~~-----d~~~Le~~l~~~~~~~~p 233 (488)
||+++|..++.++.++||.|+++...|++....... .+ ..+..++++ |+++|++.+++.
T Consensus 108 sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~------ 181 (452)
T PTZ00094 108 SGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAF------ 181 (452)
T ss_pred chHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHh------
Confidence 799999988888899999999999999887654311 01 223344444 899999998652
Q ss_pred CCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccccccc
Q 040324 234 RTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSF 313 (488)
Q Consensus 234 ~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~ 313 (488)
..+.+++.. +..|.+.|+++|.++|+++|+++++|++|++|.++..+.. ....++|++++|++|+|
T Consensus 182 -----~~~lvi~~~---s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~------~~~~~~D~l~~S~hK~l 247 (452)
T PTZ00094 182 -----RPKLIIAGA---SAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLP------SPFPYADVVTTTTHKSL 247 (452)
T ss_pred -----CCCEEEEeC---CCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCC------CCCCCCcEEEcCCccCC
Confidence 123333333 3456778999999999999999999999998877632211 11135799999999988
Q ss_pred -CCcccEEEeCHHHHHHHHhhCCCC---cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC
Q 040324 314 -GSYGGYIAGSKELIQYLKYNCPAH---LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG 389 (488)
Q Consensus 314 -g~~Gg~i~~~~~~~~~~~~~~~~~---~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 389 (488)
|..||+++.++++.+.+....... .+..+.++...++..++++.+.. ...++..+++.++.++|++.|++.|
T Consensus 248 ~GP~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~----~~~~~~~~~i~~l~~~l~~~L~~~g 323 (452)
T PTZ00094 248 RGPRSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQS----PEWKEYAKQVLKNAKALAAALEKRG 323 (452)
T ss_pred CCCCceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhC----hhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 455677777766554433221111 12224677777888888988732 2446788999999999999999889
Q ss_pred CeecCCC-CCCeEEEEeCCcc-hHHHHHHHHHHCCceEEeecCCCc--cCCCCeEEEeecCCCC----HHHHHHHHHHHH
Q 040324 390 FEVLGDN-DSPVMPIMVYNPA-KVSSFSRECLKQNVAIVTVGFPAT--PLLLARARICISASHT----KEDLIEALEVIS 461 (488)
Q Consensus 390 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~~~~~~~--~~~~~~iRi~~~~~~t----~edid~~l~~l~ 461 (488)
+++..+. .++...+.+.... ....+...|.++||.+...+-|.. +...+.+|++++..+| ++|++++++.|.
T Consensus 324 ~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 324 YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLD 403 (452)
T ss_pred cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 8876532 2344555454333 445677777667999964333322 1224789999966655 999999999999
Q ss_pred HHHHHh
Q 040324 462 RIGDLV 467 (488)
Q Consensus 462 ~~~~~~ 467 (488)
+++...
T Consensus 404 ~~~~~~ 409 (452)
T PTZ00094 404 RAVKLA 409 (452)
T ss_pred HHHHHH
Confidence 998753
No 207
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.93 E-value=3.7e-24 Score=203.94 Aligned_cols=324 Identities=19% Similarity=0.258 Sum_probs=225.9
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC----CCeEEeCCcHH-HHhhhhhcccCCCcEEEEe
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK----PAAIVFGMGYV-TNSSILPVLMGKGSLIISD 191 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sGs~-a~~~~~~~~~~~~~~Vl~~ 191 (488)
|..+.++++++++.... ... ...+|..++...|++++++++|. ++.|++|+|+- +...++..++++||.|++.
T Consensus 46 P~fv~ea~~~~~~~~~~-~qY-t~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~ 123 (420)
T KOG0257|consen 46 PKFVTEAAKNAAKEPST-NQY-TRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVF 123 (420)
T ss_pred cHHHHHHHHHHhccchh-ccc-cccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEe
Confidence 34466666666655311 111 23457777778888888887775 36677777755 4466888999999999999
Q ss_pred CCCchHHHHHHHhcCCeEEEeeCC-------------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC
Q 040324 192 SLNHNSIVNGARGSGATIRVFQHN-------------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK 258 (488)
Q Consensus 192 ~~~h~~~~~~~~~~g~~v~~~~~~-------------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~ 258 (488)
+|+|.++....++.|++++.++.+ |.++||.++.+ +++++| +.+..++.|.+.+
T Consensus 124 eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------------kTk~Ii-~ntPhNPtGkvfs 190 (420)
T KOG0257|consen 124 EPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE------------KTKAII-LNTPHNPTGKVFS 190 (420)
T ss_pred cCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC------------CccEEE-EeCCCCCcCcccC
Confidence 999999999999999998887643 88999998875 255544 4566677787764
Q ss_pred ---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcC-CCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHH
Q 040324 259 ---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLG-VDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLK 331 (488)
Q Consensus 259 ---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~-v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~ 331 (488)
|++|+++|++||.++|.||||. .+-..|.-.+.... -...+..|-++|+||+||..| ||+++++.++....
T Consensus 191 ReeLe~ia~l~~k~~~lvisDevYe--~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~ 268 (420)
T KOG0257|consen 191 REELERIAELCKKHGLLVISDEVYE--WLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALF 268 (420)
T ss_pred HHHHHHHHHHHHHCCEEEEEhhHhH--HHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHH
Confidence 9999999999999999999998 44344431111111 122455788999999999999 99999999988887
Q ss_pred hhCCCCcccCCCCHHHHHHHHHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCc
Q 040324 332 YNCPAHLYATSISPPAAEQIISAIQVVIG---EDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNP 408 (488)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 408 (488)
.......++ .+.+...|..+++..=.. ..+.....++...++++++.|.+.|.++|+++..+.+++++++.+...
T Consensus 269 ~vh~~~~~~--~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs~~ 346 (420)
T KOG0257|consen 269 PVHQNFVFT--CPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFSLA 346 (420)
T ss_pred HHhhccccc--cCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEecccc
Confidence 766555555 444444444344332110 111123456888999999999999999999999999999999888611
Q ss_pred c------------hHHHHHHHHHHC-CceEEeec-CCCc---cCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 409 A------------KVSSFSRECLKQ-NVAIVTVG-FPAT---PLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 409 ~------------~~~~~~~~l~~~-Gi~v~~~~-~~~~---~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
. +...+++.|.++ |+.+.|.. |... ...++.+|+|. .-+++-++.+++.++
T Consensus 347 ~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~--~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 347 KSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCF--CKADETLRKAIERLK 414 (420)
T ss_pred ccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHH--HhhHHHHHHHHHHHh
Confidence 1 223577778777 88888722 1111 11235677776 566777777777665
No 208
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.6e-23 Score=206.12 Aligned_cols=318 Identities=15% Similarity=0.170 Sum_probs=226.9
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCC-CCCCcccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHH-
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSH-STCSSRVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTN- 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~-~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~- 174 (488)
++.++||+.+.. .++ .++.+.+++.+.+..... .+ .. +...+|++.+|++++.+ +.+++++|+...
T Consensus 25 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~Y-------~~-~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i 94 (356)
T PRK04870 25 ATGMVKLDAMEN-PYR-LPAELRAELGERLAEVALNRY-------PD-PRAAALKAALRAAMGVPAGADVLLGNGSDELI 94 (356)
T ss_pred CCCceeCcCCCC-CCC-CCHHHHHHHHHHhhccccccC-------CC-CCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHH
Confidence 456888864422 232 246788888887764221 12 11 22378999999999864 368888888765
Q ss_pred hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc
Q 040324 175 SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI 249 (488)
Q Consensus 175 ~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v 249 (488)
..++.+++.+||.|+++.|+|..+...++..|++++.++.+ |++++++.+... ..++++++ ..
T Consensus 95 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~-----------~~~~v~l~-~p 162 (356)
T PRK04870 95 QLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEH-----------RPALVFLA-YP 162 (356)
T ss_pred HHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcC-----------CCCEEEEc-CC
Confidence 56677778999999999999999999999999999998754 678887777531 24555554 56
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHH
Q 040324 250 YSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKEL 326 (488)
Q Consensus 250 ~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~ 326 (488)
.+++|...+.+++.++++..++++|+||+|. .|... ..... +...+..+++.|||| +|.+| ||+++++++
T Consensus 163 ~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~--~~~~~--~~~~~--~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~ 235 (356)
T PRK04870 163 NNPTGNLFDDADVERIIEAAPGLVVVDEAYQ--PFAGD--SWLPR--LARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAW 235 (356)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEECCch--hhcCc--chHHH--HhhCCCEEEEecchh-hhhHHHhhhhhhCCHHH
Confidence 8899999998888888877789999999997 45421 11111 122334688999999 88888 999999999
Q ss_pred HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEe
Q 040324 327 IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMV 405 (488)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 405 (488)
++.+...... ++ .+.+...++..+++.. +..++.+++++++.+.+.+.|+++ |+.+. +.++.++++.+
T Consensus 236 i~~~~~~~~~--~~--~~~~~q~~a~~~l~~~------~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~ 304 (356)
T PRK04870 236 IAELDKVRPP--YN--VNVLTQATALFALEHV------DVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRV 304 (356)
T ss_pred HHHHHHccCC--Cc--CCHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEEC
Confidence 9988765432 22 5555555555555421 135667788889999999999987 77654 44566777765
Q ss_pred CCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 406 YNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
. ...++.+.|.++||.+.+.. .+.+...+++||+++ +.+++++++++|+++
T Consensus 305 ~---~~~~~~~~l~~~gI~v~~~~-~f~~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 305 P---DAAAVFDGLKTRGVLVKNLS-GMHPLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred C---CHHHHHHHHHHCCEEEEECC-CCCCCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 4 35678899999999999732 222234579999983 799999999999875
No 209
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=4.4e-23 Score=212.32 Aligned_cols=304 Identities=15% Similarity=0.149 Sum_probs=212.2
Q ss_pred hHHHHHHHHHHHhCC---------CCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHH-hcCCeEEEeeCC
Q 040324 147 LHNELEECVARFVGK---------PAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGAR-GSGATIRVFQHN 215 (488)
Q Consensus 147 ~~~~l~~~la~~~g~---------~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~-~~g~~v~~~~~~ 215 (488)
...+|++++|++++. ++.|++++|+.. ...++.+++++||.|+++.|+|+.+...+. ..|++++.++..
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~ 166 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCS 166 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecC
Confidence 336899999988841 345777777665 477888889999999999999999988777 479999888742
Q ss_pred -------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccC
Q 040324 216 -------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 216 -------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
|++++++.+++....+ ...++++++ ...+++|.+.+ +++|+++|++||++||+||+|+...+
T Consensus 167 ~~~~~~~~~~~le~~~~~~~~~~------~~~k~v~l~-nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f- 238 (468)
T PLN02450 167 SSNGFQITESALEEAYQQAQKLN------LKVKGVLIT-NPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVF- 238 (468)
T ss_pred CccCCcCCHHHHHHHHHHHHhcC------CCeeEEEEe-cCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccccccc-
Confidence 5688888876642221 124555655 56788898775 78889999999999999999984333
Q ss_pred CCCCC---cchhc------CCCCCCccEEEcccccccCCcc---cEEEeCH-HHHHHHHhhCCCCcccCCCCHHHHHHHH
Q 040324 286 KTGRG---VCELL------GVDTSDVDIMMGTFSKSFGSYG---GYIAGSK-ELIQYLKYNCPAHLYATSISPPAAEQII 352 (488)
Q Consensus 286 ~~g~~---~~~~~------~v~p~~~di~~~t~sK~~g~~G---g~i~~~~-~~~~~~~~~~~~~~~~~~~~p~~~aa~~ 352 (488)
.+.. ..+.. +.++.+..++++||||.||.+| ||+++++ .+++.+..... ++ ..+.+.+.++.
T Consensus 239 -~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~---~~-~~s~~~Q~a~~ 313 (468)
T PLN02450 239 -DSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSS---FG-LVSSQTQYLLS 313 (468)
T ss_pred -CCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhh---cC-CCCHHHHHHHH
Confidence 2221 11211 1122345688999999999888 9999974 45666554422 22 24555555554
Q ss_pred HHHHHHhccCCC-chHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCc------chHHHHHHHHHH-CCce
Q 040324 353 SAIQVVIGEDGS-CRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNP------AKVSSFSRECLK-QNVA 424 (488)
Q Consensus 353 a~L~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~-~Gi~ 424 (488)
+.|+. +... ...++.+++++++.+.+.+.|++.|+++..+.++.++|+.+... ....++.+.|++ +||.
T Consensus 314 ~~L~~---~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~ 390 (468)
T PLN02450 314 ALLSD---KKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLN 390 (468)
T ss_pred HHhCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEE
Confidence 54431 1111 13466788899999999999999998877666677778776421 122457777776 5999
Q ss_pred EEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 425 IVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 425 v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
+.|.. .+.....+++||+++. ++++++++++++|++++++..
T Consensus 391 v~PG~-~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 391 ISPGS-SCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred EeCcc-ccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 99732 1222335799999943 679999999999999987765
No 210
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=8.8e-23 Score=202.11 Aligned_cols=303 Identities=15% Similarity=0.181 Sum_probs=212.0
Q ss_pred ceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhh
Q 040324 100 SRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSS 176 (488)
Q Consensus 100 ~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~ 176 (488)
.+++||++| |++|.+. +.+.. ..+..| ..+. .+|++.+|+++|.. +.+++++|+.....
T Consensus 24 ~~~i~ls~Nenp~~~~~--~~~~~---~~~~~Y------------p~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~ 85 (339)
T PRK06959 24 DAWLDLSTGINPHGYPV--PPVPA---DAWRRL------------PEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIR 85 (339)
T ss_pred hhhceeccCCCCCCCCC--CCCCH---HHHHhC------------CCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHH
Confidence 567999876 5555441 22211 234443 1122 69999999999984 57888888887644
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
++..+.++++ |+++.|+|+.+...++..|++++.++.++ +. +.+ ..+.++++.| .+++|.+
T Consensus 86 ~l~~~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-~~----~~~------------~~~~v~l~nP-nNPTG~~ 146 (339)
T PRK06959 86 ALPALLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-DT----LPA------------ALTHLIVVNP-NNPTAER 146 (339)
T ss_pred HHHHhcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc-hh----ccc------------cCCEEEEeCC-CCCCCCC
Confidence 4445567776 77899999999999999999998887644 11 211 1234555544 7899988
Q ss_pred CChHHH---HHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHH
Q 040324 257 CKLPEI---ITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYL 330 (488)
Q Consensus 257 ~~l~~l---~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~ 330 (488)
.+.+++ ++.|++++.++|+||+|. .+... ....... + .+..++++||||.+|.+| ||+++++++++.+
T Consensus 147 ~s~~~l~~l~~~~~~~~~~vI~DEay~--~~~~~-~s~~~~~--~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l 220 (339)
T PRK06959 147 LPAARLLRWHAQLAARGGTLIVDEAFA--DTLPA-ASLAAHT--D-RPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAAL 220 (339)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCc--cCCCc-ccchhcc--C-CCCEEEEecChhhcCCcchheEEEecCHHHHHHH
Confidence 875555 455678899999999998 44321 1111111 2 233588999999999888 9999999999999
Q ss_pred HhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcch
Q 040324 331 KYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAK 410 (488)
Q Consensus 331 ~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~ 410 (488)
...... ++ .+.+.++++.++|+. .+..++.+++++++.+++.+.|++.|+.+. ..+.++++.+. .
T Consensus 221 ~~~~~~--~~--vs~~~q~a~~~~L~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~--~~~~f~~~~~~---~ 285 (339)
T PRK06959 221 RDALGA--WT--VSGPARHAVRAAFAD------AAWQAAMRERLAADGARLAALLRAHGFAVH--ATPLFSWTDDP---R 285 (339)
T ss_pred HHhcCC--CC--CcHHHHHHHHHHhCc------HHHHHHHHHHHHHHHHHHHHHHHHCCCCcc--CcceEEEEeCC---C
Confidence 876543 33 566666666666642 124567788899999999999999987764 23444455432 4
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
..++.+.|.++||.+..++. .+++||++ ..+++|+++++++|+++++.+.
T Consensus 286 ~~~l~~~l~~~GI~vr~~~~------~~~lRisi--~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 286 AAALHAALARRGIWTRYFAP------PPSVRFGL--PADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred HHHHHHHHHhCCeEEEECCC------CCeEEEEC--CCCHHHHHHHHHHHHHHHHHHh
Confidence 56899999999999985321 25899987 4578999999999999887764
No 211
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.93 E-value=1.8e-22 Score=206.23 Aligned_cols=342 Identities=15% Similarity=0.136 Sum_probs=227.9
Q ss_pred cceeEEeccccc-cCCCCC--CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHh
Q 040324 99 VSRCLNLGSYNY-LGFAAA--DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNS 175 (488)
Q Consensus 99 g~~~ld~~s~~~-lg~~~~--~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~ 175 (488)
|..++++.+..+ ..+... ...+.+++.+++......| +......+|+++++++++.+.++++++|++|+.
T Consensus 35 g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y-------~~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~ 107 (460)
T PRK13238 35 GYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAY-------AGSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQ 107 (460)
T ss_pred CCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCccc-------CCCCCHHHHHHHHHHHhCCCcEEECCCHHHHHH
Confidence 566777764433 123311 1246777777775422233 233445899999999999999999999999998
Q ss_pred hhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC---------------CCHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 176 SILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH---------------NTPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 176 ~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~---------------~d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
.++.+++++|| |++..+.|.++...+...|++++.++. -|+++|++.+.+. ++.+
T Consensus 108 ~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~---------~~~~ 177 (460)
T PRK13238 108 ILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEV---------GAEN 177 (460)
T ss_pred HHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhc---------CCCc
Confidence 88889999999 888999888888888899999887753 2678888888652 1123
Q ss_pred eEEEEEcCcCCCC-CCCCC---hHHHHHHHHHcCcEEEEEcccccc-c-cC------CCCCCcchhcCCCCCCccEEEcc
Q 040324 241 KIMVVVEGIYSME-GELCK---LPEIITICKRYKAYTYLDEAHSIG-A-VG------KTGRGVCELLGVDTSDVDIMMGT 308 (488)
Q Consensus 241 ~~~vi~e~v~s~~-G~~~~---l~~l~~l~~~~g~~li~DE~~s~g-~-~g------~~g~~~~~~~~v~p~~~di~~~t 308 (488)
+.+|++....+.. |.+.+ +++|+++|++||++||+|++|..+ . |. ..+....+..-..-.-.|++..|
T Consensus 178 tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~S 257 (460)
T PRK13238 178 VPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMS 257 (460)
T ss_pred eeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEe
Confidence 4455555555554 46554 789999999999999999988532 1 21 11221211110000123777778
Q ss_pred cccccCC-cccEEEeC-HHHHHHHHhhC---CCC-cccCCCCHHHHHHHHH-HHHHHhccCCCchHHHHHHHHHHHHHHH
Q 040324 309 FSKSFGS-YGGYIAGS-KELIQYLKYNC---PAH-LYATSISPPAAEQIIS-AIQVVIGEDGSCRGAQKLARIRENSNFF 381 (488)
Q Consensus 309 ~sK~~g~-~Gg~i~~~-~~~~~~~~~~~---~~~-~~~~~~~p~~~aa~~a-~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (488)
..|.+.+ .||+++++ +++++.++... +++ +++ +.+..++.+++ +|+... .++..+...++.++|
T Consensus 258 g~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~--g~~~~~~~Ala~~l~e~~-------~~~~~~~~~~~~~~l 328 (460)
T PRK13238 258 AKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYG--GLAGRDMEALAVGLYEGM-------DEDYLAYRIGQVEYL 328 (460)
T ss_pred cccCCCCcceeEEEcChHHHHHHhhhcccccCCccccc--CcHHHHHHHHHhhHHHhh-------ChHHHHHHHHHHHHH
Confidence 8886543 47888887 68888887653 222 343 54554444333 454331 234444455567999
Q ss_pred HHHHHhCCCeecCCCCCCeEEEEeCCc--------chHHHHHHHHHHC-CceEEeec---CCCcc-CC------CCeEEE
Q 040324 382 RSKLQKMGFEVLGDNDSPVMPIMVYNP--------AKVSSFSRECLKQ-NVAIVTVG---FPATP-LL------LARARI 442 (488)
Q Consensus 382 ~~~L~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~-Gi~v~~~~---~~~~~-~~------~~~iRi 442 (488)
.+.|++.|+++..+.++..+.+.+... ....+++.+|+++ ||.+.+.+ .+..+ .+ ...+||
T Consensus 329 ~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rl 408 (460)
T PRK13238 329 GEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRL 408 (460)
T ss_pred HHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEE
Confidence 999999999999888887766655321 1246789999877 99999844 12111 11 478999
Q ss_pred eecC-CCCHHHHHHHHHHHHHHHHH
Q 040324 443 CISA-SHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 443 ~~~~-~~t~edid~~l~~l~~~~~~ 466 (488)
+++- ..|.+++|.+.++|+++.+.
T Consensus 409 a~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 409 AIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred ecccccCCHHHHHHHHHHHHHHHHh
Confidence 9973 34999999999999998743
No 212
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=9.4e-23 Score=204.35 Aligned_cols=314 Identities=14% Similarity=0.131 Sum_probs=217.9
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHH-HHhhh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYV-TNSSI 177 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~-a~~~~ 177 (488)
+.++++..|.. .++ .+|.+.+++.+.+...+ .+ +... ..+|++.++++++.+ +.|++++|+. +...+
T Consensus 43 ~~~i~l~~~~~-~~~-~~~~~~~a~~~~~~~~~-~Y-------~~~~-~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~ 111 (370)
T PRK09105 43 EGAVFLNANEC-PLG-PSPAARDAAARSAALSG-RY-------DLEL-EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYA 111 (370)
T ss_pred CCcEEecCCCC-CCC-CCHHHHHHHHHHHHHhc-CC-------CCch-HHHHHHHHHHHhCcChhhEEEcCChHHHHHHH
Confidence 34566654321 222 35778888877765421 12 2222 578999999999863 4566666655 55777
Q ss_pred hhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC
Q 040324 178 LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM 252 (488)
Q Consensus 178 ~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~ 252 (488)
+.++.++||.|+++.|+|+.+...++..|.+++.++.+ |++++++.. +.++++++ ...+++
T Consensus 112 ~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-------------~~~~~v~l-~nP~NP 177 (370)
T PRK09105 112 VLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD-------------PNAGLIYI-CNPNNP 177 (370)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC-------------CCCCEEEE-eCCCCC
Confidence 78888999999999999999999999999999888753 445554321 12444444 456899
Q ss_pred CCCCCChHHHHHHHHH--cCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHH
Q 040324 253 EGELCKLPEIITICKR--YKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELI 327 (488)
Q Consensus 253 ~G~~~~l~~l~~l~~~--~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~ 327 (488)
+|.+.+.+++.++++. +++++|+||+|. .|+.. ....+..+ ..+..+++.||||++|.+| ||++++++++
T Consensus 178 TG~~~~~~~l~~l~~~~~~~~~lIvDEaY~--~f~~~-~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i 252 (370)
T PRK09105 178 TGTVTPRADIEWLLANKPAGSVLLVDEAYI--HFSDA-PSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAARPDLL 252 (370)
T ss_pred CCcCcCHHHHHHHHHhCCCCcEEEEECchH--HhccC-cchHHHHh--hCCCEEEEecccHhhcCCccceeeeecCHHHH
Confidence 9999987777777654 489999999997 44421 11222211 1233578899999999888 9999999999
Q ss_pred HHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC
Q 040324 328 QYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN 407 (488)
Q Consensus 328 ~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~ 407 (488)
+.+... . .. ..+.+.+.++.++|+. .++.++.+++++++.+++.+.|++.|+.+..+. +.++.+.+.
T Consensus 253 ~~l~~~-~--~~--~~~~~~~~aa~~~L~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~-~~f~~~~~~- 319 (370)
T PRK09105 253 AKLARF-G--HN--PLPVPAAAAGLASLRD------PKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQ-ANCFMVDVK- 319 (370)
T ss_pred HHHHhc-C--CC--CcCHHHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCC-CcEEEEeCC-
Confidence 988765 2 12 2555555666666542 125567778889999999999999988776544 444444442
Q ss_pred cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 408 PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
....++++.|+++||.+.. .++ ...+++|+++. +++++++++++|++++
T Consensus 320 -~~~~~l~~~L~~~gI~v~~-~~~---~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 320 -RPAKAVADAMAKQGVFIGR-SWP---IWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred -CCHHHHHHHHHHCCcEEec-CCC---CCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 3567899999999999842 222 23479999983 7899999999998765
No 213
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=2.1e-22 Score=204.08 Aligned_cols=325 Identities=18% Similarity=0.175 Sum_probs=232.9
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC---CeEEeCCcHHHHhhhhhcccCCCcEEEEeCC
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP---AAIVFGMGYVTNSSILPVLMGKGSLIISDSL 193 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~ 193 (488)
+..+.+++.+++.+...++. ..+..+..+++++.++++++.+ .+++.++|++++..++..+.++||.|++..+
T Consensus 17 P~~~~~~V~~a~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~ 92 (401)
T PLN02409 17 PVNIPERVLRAMNRPNEDHR----SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRI 92 (401)
T ss_pred CCCCCHHHHHHhcCCCCCCC----CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCC
Confidence 45566777777766433322 1134566788999999999874 2577778888888888788899999999998
Q ss_pred CchHHH--HHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHH-
Q 040324 194 NHNSIV--NGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITI- 265 (488)
Q Consensus 194 ~h~~~~--~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l- 265 (488)
.|.+.. ..++..|.+++.++.+ |++++++.+++. + + +..+ +|++..+.+.+|.+.|+++|.++
T Consensus 93 ~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~-----~--~-~~~k-~v~~~~~~~~tG~~~~~~~i~~l~ 163 (401)
T PLN02409 93 GQFSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQD-----T--N-HKIK-AVCVVHNETSTGVTNDLAGVRKLL 163 (401)
T ss_pred CchhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhC-----c--C-CCcc-EEEEEeecccccccCCHHHHHHHH
Confidence 887653 4456678888888754 678888877641 0 0 1133 45555667778999999999999
Q ss_pred -HHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cc-cEEEeCHHHHHHHHhhCCC-C----
Q 040324 266 -CKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YG-GYIAGSKELIQYLKYNCPA-H---- 337 (488)
Q Consensus 266 -~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~~~~~~~~~~~~~~~-~---- 337 (488)
|+++|+++|+|++|++|... .+++..++|+++.|.+|++++ +| |+++.+++.++.+...... .
T Consensus 164 ~~~~~g~~~vvD~v~s~g~~~---------id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
T PLN02409 164 DCAQHPALLLVDGVSSIGALD---------FRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDW 234 (401)
T ss_pred hhhccCcEEEEEcccccCCcc---------ccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCH
Confidence 99999999999999854332 233334578999999999965 56 9999999988877542210 0
Q ss_pred ----------cc-cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC---CC-eEE
Q 040324 338 ----------LY-ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND---SP-VMP 402 (488)
Q Consensus 338 ----------~~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~~-~~~ 402 (488)
.+ ..+.+.....+..++++.+.. ...+++.++.+++.+++++.|+++|+++..+.. ++ +.+
T Consensus 235 ~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~----~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~ 310 (401)
T PLN02409 235 ADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFE----EGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTA 310 (401)
T ss_pred HHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEE
Confidence 01 112444556777788888742 246778899999999999999999988776421 32 334
Q ss_pred EEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCc
Q 040324 403 IMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIK 470 (488)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~ 470 (488)
+.++...+..++.+.|.++ ||.+.. |+ .+.....+|++....+|.+|+..++++|++++.+++.+
T Consensus 311 ~~~p~~~~~~~l~~~l~~~~~i~i~~-G~--~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~~ 376 (401)
T PLN02409 311 VVVPEGIDSAEIVKNAWKKYNLSLGL-GL--NKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGYP 376 (401)
T ss_pred EeCCCCCCHHHHHHHHHHhCCEEEEc-CC--CcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 4444445566788888755 998884 22 22235789999999999999999999999999988755
No 214
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-22 Score=203.52 Aligned_cols=314 Identities=17% Similarity=0.183 Sum_probs=216.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHH-Hhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVT-NSS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a-~~~ 176 (488)
+.+++||+.+.. .++ .+|.+.+++.+.++.. ..++ .....+|++.+|++++.+ +.+++++|+.. ...
T Consensus 29 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~-~~Y~--------~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~ 97 (357)
T PRK14809 29 PDDLVKLSSNEN-PHG-PSPAAVEAIREAAERV-HSYP--------KASHADLTAALADRWDVSPEQVWLANGGDGALDY 97 (357)
T ss_pred ccceeEecCCCC-CCC-CCHHHHHHHHHHHhhh-hcCC--------CCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHH
Confidence 567899975422 122 2466777877766542 2221 112368999999999864 56777777665 466
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI 249 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v 249 (488)
++.++.++||.|+++.|+|+.+.......|..++.++.. +.+++++... ..++++++ +.
T Consensus 98 ~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-------------~~k~i~l~-~p 163 (357)
T PRK14809 98 LARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-------------GERIVYLT-SP 163 (357)
T ss_pred HHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-------------CCcEEEEe-CC
Confidence 778888999999999999988887788888888877653 2222222211 14555555 78
Q ss_pred CCCCCCCCChHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCH
Q 040324 250 YSMEGELCKLPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSK 324 (488)
Q Consensus 250 ~s~~G~~~~l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~ 324 (488)
++++|.+.+.+++.++++.. +++||+||+|. .+...+... .. ++..+..++++||||.+|.+| ||+++++
T Consensus 164 ~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~--~~~~~~~~~-~~--~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~ 238 (357)
T PRK14809 164 HNPTGSEIPLDEVEALAERTDEETLVVVDEAYG--EFAERPSAV-AL--VEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238 (357)
T ss_pred CCCCCcCCCHHHHHHHHHhCccCcEEEEechhh--hccCCchhH-HH--HhhCCCEEEEecchhHhcCcchhheeeecCH
Confidence 89999999877777776654 78999999998 454332211 11 122344688899999999888 9999999
Q ss_pred HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEE
Q 040324 325 ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIM 404 (488)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 404 (488)
++++.+..... .++ .+++.++++.++|.. .++.++.++.++++.+.+.+.|....+ +.++.++++.
T Consensus 239 ~~~~~~~~~~~--~~~--~~~~~~~~a~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f~~~~ 304 (357)
T PRK14809 239 EWADAYARVNT--PFA--ASELACRAGLAALDD------DEHVERTVETARWAREYIREELDAPTW----ESAGNFVLAE 304 (357)
T ss_pred HHHHHHHHhCC--CCC--CCHHHHHHHHHHhCC------HHHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCEEEEE
Confidence 99998876543 233 667776776666531 124566777778888888888865422 3456777776
Q ss_pred eCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 405 VYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+. +..++.+.|.++||.+.+..... ..+++||++. +++++++++++|+++++
T Consensus 305 ~~---~~~~~~~~l~~~gv~v~~g~~f~---~~~~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 305 VG---DASAVAEAAQERGVIVRDCTSFG---LPECIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred CC---CHHHHHHHHHHCCEEEEECccCC---CCCeEEEecC---CHHHHHHHHHHHHHHhc
Confidence 63 35688899988899999743221 1368999873 58999999999988764
No 215
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=8.3e-23 Score=202.06 Aligned_cols=282 Identities=19% Similarity=0.247 Sum_probs=200.0
Q ss_pred hHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHH
Q 040324 147 LHNELEECVARFVGKP-AAIVFGMGYVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVL 224 (488)
Q Consensus 147 ~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l 224 (488)
...+|++++|++++.+ ..|++++|+... ..++. +.++++ |++..|+|+.+...++..|++++.++.++.+...+.+
T Consensus 41 ~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l 118 (332)
T PRK06425 41 SYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYKGYAFTHGIRISALPFNLINNNPEIL 118 (332)
T ss_pred CHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCcccCcHHHH
Confidence 3489999999999974 568888887765 34444 566765 4455899999999999999999999865311112333
Q ss_pred HHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCC
Q 040324 225 REQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTS 300 (488)
Q Consensus 225 ~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~ 300 (488)
++. ..++++++ ...+++|.+.+ +++|+++|+++|++||+||+|. .|...+.. .....+ ..
T Consensus 119 ~~~-----------~~k~v~l~-nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~--~~~~~~~~~~~~~~~--~~ 182 (332)
T PRK06425 119 NNY-----------NFDLIFIV-SPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFI--DFVPNRAEEDVLLNR--SY 182 (332)
T ss_pred hhc-----------CCCEEEEe-CCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchh--ccccccchhHHHHhc--cC
Confidence 321 24566666 77889998776 7788888999999999999998 55433221 122211 12
Q ss_pred CccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIREN 377 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (488)
+..|+++||||++|.+| ||+++++++++.+...... ++ .+.+++++ +..... ....++.++.++++
T Consensus 183 ~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~--~~--~~~~~~~~-l~~~~~------~~~~~~~~~~~~~~ 251 (332)
T PRK06425 183 GNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEP--WS--VCDPAIDF-IRSIDL------DYVAKHSLDIMENE 251 (332)
T ss_pred CCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCC--Cc--cCHHHHHH-HHHhhh------HHHHHHHHHHHHHH
Confidence 35788999999999888 9999999999988865432 22 33333222 222111 11335678888999
Q ss_pred HHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHH
Q 040324 378 SNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 378 ~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l 457 (488)
.+++.+.|++.|+.+..++++.++++.+. ...++.+.|+++||.+.+.. .+...+.+++||++ -++++.++++
T Consensus 252 r~~l~~~L~~~g~~~~~~~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~-~f~~~~~~~iRis~---~~~~~~~~l~ 324 (332)
T PRK06425 252 RSYLINNLEAMGFRAAGDPSANFITFMIP---DAHDFYSYLLKNGILVRLLD-DYECLGEQYIRIAI---RRRSFNIKLV 324 (332)
T ss_pred HHHHHHHHHHCCCEECCCCCceEEEEEcC---CHHHHHHHHHHCCeEEEECC-CCCCCCCCEEEEEe---CCHHHHHHHH
Confidence 99999999999988765556677777664 46789999999999999732 22223357999998 5789999999
Q ss_pred HHHHHHH
Q 040324 458 EVISRIG 464 (488)
Q Consensus 458 ~~l~~~~ 464 (488)
++|++++
T Consensus 325 ~al~~~~ 331 (332)
T PRK06425 325 NALRNFL 331 (332)
T ss_pred HHHHHHh
Confidence 9998765
No 216
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.93 E-value=9.5e-23 Score=201.49 Aligned_cols=272 Identities=17% Similarity=0.227 Sum_probs=197.2
Q ss_pred HHHHHHHHHHhCCC-CeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHH
Q 040324 149 NELEECVARFVGKP-AAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQ 227 (488)
Q Consensus 149 ~~l~~~la~~~g~~-~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~ 227 (488)
.++++.++++++.+ +.+++++|+.+...++..+..++ .|++..|+|..+...+...|.+++.++ |++++++.+++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~--d~~~l~~~~~~- 125 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLAPG-RVLVLAPTYSEYARAWRAAGHEVVELP--DLDRLPAALEE- 125 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC--CHHHHHhhccc-
Confidence 79999999999975 67888888887644444445666 588889999999999999999988887 88888877632
Q ss_pred HhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccE
Q 040324 228 IAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDI 304 (488)
Q Consensus 228 ~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di 304 (488)
.+++++ ....+++|.+.+ +++|+++|+++|+++|+||+|. .+.+.. ......+ ..+.++
T Consensus 126 ------------~~~v~i-~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~--~~~~~~-~~~~~~~--~~~~~i 187 (330)
T TIGR01140 126 ------------LDVLVL-CNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFI--DFTPDA-SLAPQAA--RFPGLV 187 (330)
T ss_pred ------------CCEEEE-eCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc--ccCCcc-chhhHhc--cCCCEE
Confidence 344444 445788999887 7778899999999999999998 443321 2222211 234579
Q ss_pred EEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHH
Q 040324 305 MMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFF 381 (488)
Q Consensus 305 ~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l 381 (488)
+++||||.+|.+| ||+++++++++.+...... ++ .+++.++++.+.++. .+..++..++++++.+++
T Consensus 188 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~--~~--~s~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~l 257 (330)
T TIGR01140 188 VLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP--WT--VNGPARAAGRAALAD------TAWQAATRARLAAERARL 257 (330)
T ss_pred EEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC--CC--chHHHHHHHHHHHhc------hHHHHHHHHHHHHHHHHH
Confidence 9999999999777 9999999999988865432 22 556665555555542 124466788899999999
Q ss_pred HHHHHhCC-CeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHH
Q 040324 382 RSKLQKMG-FEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVI 460 (488)
Q Consensus 382 ~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (488)
++.|++.+ +.+. +..+.++++.+. ...+++++|+++||.+.+..+. ...+.+++||+++ ...++ ++++++|
T Consensus 258 ~~~L~~~~~~~~~-~~~~~f~~~~~~---~~~~l~~~l~~~gi~v~pg~~f-~~~~~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 258 AALLARLGGLEVV-GGTALFLLVRTP---DAAALHEALARRGILIRDFDNF-PGLDPRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred HHHHHhCCCceEC-CCCCeEEEEEcC---CHHHHHHHHHHCCEEEEECCCC-CCCCCCEEEEEec--CHHHH-HHHHHhh
Confidence 99999987 4443 345666666554 2468999999999999984322 1223469999984 33355 8887776
No 217
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.93 E-value=5.6e-23 Score=207.25 Aligned_cols=318 Identities=16% Similarity=0.201 Sum_probs=218.8
Q ss_pred CccchHHHHHHHHHcCCC--CCCcccCCCChhhHHHHHHHHHHHhCCC---CeEEeCCcHHHHhhhhhcccCCCcEEEEe
Q 040324 117 DEYCTPRVIDSLKKYSHS--TCSSRVDGGTLALHNELEECVARFVGKP---AAIVFGMGYVTNSSILPVLMGKGSLIISD 191 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~--~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~ 191 (488)
++.+.+++.+.++++... ...........+...++++.++++++.+ .++++++|++++..++.++.++++.|++.
T Consensus 13 p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~ 92 (376)
T TIGR01977 13 PDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITT 92 (376)
T ss_pred CHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEEC
Confidence 467888888888775421 1111111112356689999999999974 24455566777777777788899999999
Q ss_pred CCCchHHHHH----HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHH
Q 040324 192 SLNHNSIVNG----ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEI 262 (488)
Q Consensus 192 ~~~h~~~~~~----~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l 262 (488)
.+.|+++... .+..|.+++.++.+ |++++++.+++ +..+|++..+.+++|.+.++++|
T Consensus 93 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~-------------~~~~v~~~~~~n~tG~~~~~~~i 159 (376)
T TIGR01977 93 PMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKT-------------NTKLIVVSHASNVTGTILPIEEI 159 (376)
T ss_pred cchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCC-------------CCeEEEEECCCCCccccCCHHHH
Confidence 9999887543 33448888887643 67888777643 23456667888999999999999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc-c-cEEEeCHHH-HHHHHhhC-----
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-G-GYIAGSKEL-IQYLKYNC----- 334 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-G-g~i~~~~~~-~~~~~~~~----- 334 (488)
.++|+++|+++|+|++|++|... +++...++|+++.+++|+++++ | |++..+++. +..+....
T Consensus 160 ~~l~~~~~~~livD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~ 230 (376)
T TIGR01977 160 GELAQENGIFFILDAAQTAGVIP---------IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHS 230 (376)
T ss_pred HHHHHHcCCEEEEEhhhccCccC---------CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccc
Confidence 99999999999999999866543 2333355799999999998653 4 555444332 11111100
Q ss_pred ----------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCC----CCC
Q 040324 335 ----------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDN----DSP 399 (488)
Q Consensus 335 ----------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~----~~~ 399 (488)
..+.. .+.+....++..++++.+... ..+.+.++..++.+++++.|++. |+.+..+. .++
T Consensus 231 ~~~~~~~~~~~r~~~-~t~~~~~~~a~~~al~~~~~~----g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 305 (376)
T TIGR01977 231 ALIDQPSELPDRFES-GTLNTPGIAGLNAGIKFIEKI----GIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVG 305 (376)
T ss_pred ccccccccchhhccC-CCCCHHHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCC
Confidence 00111 134566667777788887422 34677888899999999999865 66665432 245
Q ss_pred eEEEEeCCcchHHHHHHHHHHC-CceEEeecCCC-------ccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 400 VMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPA-------TPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~-------~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
++.+.+.. ....++.+.|.++ ||.+....+-. .+...+.+|++++..+|++|+++++++|++
T Consensus 306 ~v~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 306 VVSFTVEG-IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred eEEEEECC-CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 66666642 3566899999988 99987522111 122346899999999999999999999975
No 218
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=1.1e-22 Score=207.76 Aligned_cols=306 Identities=18% Similarity=0.209 Sum_probs=212.7
Q ss_pred hHHHHHHHHHHHhCC---------CCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHH-hcCCeEEEeeCC
Q 040324 147 LHNELEECVARFVGK---------PAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGAR-GSGATIRVFQHN 215 (488)
Q Consensus 147 ~~~~l~~~la~~~g~---------~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~-~~g~~v~~~~~~ 215 (488)
...+|++.+|++++. ++.|++++|+.. +..++.+++.+||.|+++.|+|+.+...+. ..|+++++++.+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~ 175 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCD 175 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCC
Confidence 347888888888752 245777777654 577788889999999999999999987776 468888888743
Q ss_pred -------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccC
Q 040324 216 -------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 216 -------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
|+++++++++++...+ ...+++++ ....++.|.+.+ +++|+++|++|+++||+||+|+...++
T Consensus 176 ~~~~f~~~~~~le~a~~~a~~~~------~~vk~lll-~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~ 248 (447)
T PLN02607 176 SSNNFQVTPQALEAAYQEAEAAN------IRVRGVLI-TNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFS 248 (447)
T ss_pred CCCCCcCCHHHHHHHHHHHHHhC------CCeeEEEE-eCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccC
Confidence 6788998887654332 12455555 456788888775 889999999999999999999855554
Q ss_pred CCC-CCcchh---cCC-CCCCccEEEcccccccCCcc---cEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHH
Q 040324 286 KTG-RGVCEL---LGV-DTSDVDIMMGTFSKSFGSYG---GYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQ 356 (488)
Q Consensus 286 ~~g-~~~~~~---~~v-~p~~~di~~~t~sK~~g~~G---g~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (488)
... ..+.+. .+. +..+..+++.||||.||.+| ||+++ ++++++.++.... ++ ..+.+...++.+.|+
T Consensus 249 ~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~---~~-~~s~~~q~~~~~~L~ 324 (447)
T PLN02607 249 ASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSS---FT-LVSSQTQHLLASMLS 324 (447)
T ss_pred CCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhh---cC-CCCHHHHHHHHHHhC
Confidence 221 112222 111 11234577899999999888 99998 6778777765432 21 134444333333332
Q ss_pred HHhccCC-CchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCc------chHHHHHHHHHH-CCceEEee
Q 040324 357 VVIGEDG-SCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNP------AKVSSFSRECLK-QNVAIVTV 428 (488)
Q Consensus 357 ~i~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~-~Gi~v~~~ 428 (488)
+... ....+..+++++++.+.+.+.|++.|+++..+.++.++|+.+... ....+++++|++ .||.+.|
T Consensus 325 ---d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~p- 400 (447)
T PLN02607 325 ---DEEFTENYIRTNRERLRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISP- 400 (447)
T ss_pred ---CchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcC-
Confidence 2111 123456778888899999999999998877776778888877421 123467878876 4999987
Q ss_pred cCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 429 GFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 429 ~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
|..+.....+++|++++ ..+++++++++++|.+++++..
T Consensus 401 G~~f~~~~~g~fRi~fa-~~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 401 GSSCHCSEPGWFRVCFA-NMSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred ccccCCCCCCEEEEEec-cCCHHHHHHHHHHHHHHHHHHH
Confidence 22222234589999994 2579999999999999997654
No 219
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.93 E-value=5.2e-23 Score=207.59 Aligned_cols=326 Identities=15% Similarity=0.138 Sum_probs=219.5
Q ss_pred CCCCCCccchHHHHHHHHHcCCCCCCcccCC--CChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhccc---CC
Q 040324 112 GFAAADEYCTPRVIDSLKKYSHSTCSSRVDG--GTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPVLM---GK 184 (488)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~--g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~~---~~ 184 (488)
+.+..++.+.+++.+.++... +..+..... -.....+++++.+++++|.+ .++++++|++++..++..+. .+
T Consensus 7 a~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~ 85 (379)
T TIGR03402 7 ATTRVDPEVLEAMLPYFTEYF-GNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPE 85 (379)
T ss_pred CCCCCCHHHHHHHHHHHHhcC-CCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCC
Confidence 334446788888888776532 221111100 01345678999999999974 35666677777766665542 45
Q ss_pred CcEEEEeCCCchHHHHHH---HhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 185 GSLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 185 ~~~Vl~~~~~h~~~~~~~---~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
++.|++....|+++.... ...|.+++.++.+ |++++++.+++ ++.++++..+.+.+|.+
T Consensus 86 ~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~-------------~~~lv~i~~~~n~tG~~ 152 (379)
T TIGR03402 86 KRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD-------------DTALVSVMWANNETGTI 152 (379)
T ss_pred CCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCC-------------CcEEEEEEcccCCeeec
Confidence 688999999998876543 3358888888743 67888877653 34567777888999999
Q ss_pred CChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHHhhCC
Q 040324 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLKYNCP 335 (488)
Q Consensus 257 ~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~~~~~ 335 (488)
.|+++|.++|+++|+++++|++|+.|... .++...++|+++.|.+|.+|..| |++..+++.. +.....
T Consensus 153 ~~~~~I~~l~~~~g~~vivD~~~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~~--~~p~~~ 221 (379)
T TIGR03402 153 FPIEEIGEIAKERGALFHTDAVQAVGKIP---------IDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTR--FRPLLR 221 (379)
T ss_pred ccHHHHHHHHHHcCCEEEEECcccccccc---------cCcccCCCCEEEEcHHHcCCCCceEEEEECCCCC--CCCccc
Confidence 99999999999999999999999854331 22333456899888889767666 8887765431 111110
Q ss_pred C-----CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeecCCCC---CCeEEEEe
Q 040324 336 A-----HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK-M-GFEVLGDND---SPVMPIMV 405 (488)
Q Consensus 336 ~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~---~~~~~~~~ 405 (488)
+ .....+.+.....+..++++.+.. +.++..++.+++.+++++.|++ + ++.+.++.. ..++.+.+
T Consensus 222 g~~~~~~~~~gt~~~~~~~~l~~al~~~~~-----~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR03402 222 GGHQERGRRAGTENVPGIVGLGKAAELATE-----HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF 296 (379)
T ss_pred CCccCCCcCCCCccHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe
Confidence 0 011223556666677778887642 4566678888899999999985 4 666655432 12444444
Q ss_pred CCcchHHHHHHHHHHCCceEEeecCCCcc----------------CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 406 YNPAKVSSFSRECLKQNVAIVTVGFPATP----------------LLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 406 ~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~----------------~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.. ....++...|.++||.+........+ ...+.+|++++..+|++|||+++++|+++++.+.
T Consensus 297 ~~-~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 297 EY-IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred cC-CCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 32 34567888888889999852211111 1136899999999999999999999999988764
No 220
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=2.2e-22 Score=201.07 Aligned_cols=317 Identities=17% Similarity=0.168 Sum_probs=215.5
Q ss_pred cceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-h
Q 040324 99 VSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (488)
Q Consensus 99 g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~ 175 (488)
+++++||+.| +.++ .++.+.+++.+.+.... .+ .. ....++++.+|++++.+ +.+++++|+... .
T Consensus 19 ~~~~i~l~~~~~~~~---~p~~~~~a~~~~~~~~~-~y-------~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~ 86 (356)
T PRK08056 19 PDQLLDFSANINPLG---MPVSLKRAIIDNLDCAE-RY-------PD-VEYRHLHQALARHHQVPASWILAGNGETESIF 86 (356)
T ss_pred hhhEEEeccccCCCC---CCHHHHHHHHHHHHhcc-cC-------cC-ccHHHHHHHHHHHhCcChhhEEECCCHHHHHH
Confidence 5778999754 3333 24678888887776532 22 11 12479999999999864 567777777654 4
Q ss_pred hhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHH-HHHHHHHHHHhcCCCCCCCCCceEEEEEcCc
Q 040324 176 SILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPS-HLEEVLREQIAEGQPRTRRPWKKIMVVVEGI 249 (488)
Q Consensus 176 ~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~-~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v 249 (488)
.++.++ .+++ +++..|.|..+...++..|.+++.++.. +++ ++++.+. +..++ |++...
T Consensus 87 ~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~------------~~~k~-v~l~~p 151 (356)
T PRK08056 87 AVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLTDAILEALT------------PDLDC-LFLCTP 151 (356)
T ss_pred HHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCccHHHHHhcc------------CCCCE-EEEeCC
Confidence 455554 5666 5566788998888889999999988753 121 2222221 12444 445677
Q ss_pred CCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEe-
Q 040324 250 YSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAG- 322 (488)
Q Consensus 250 ~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~- 322 (488)
.+++|...+ +++|+++|+++++++|+||+|. .+-..+........ ..+.++++.||||++|.+| ||+++
T Consensus 152 ~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~--~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 227 (356)
T PRK08056 152 NNPTGLLPERQLLQAIAERCKSLNIALILDEAFI--DFIPDETGFIPQLA--DNPHLWVLRSLTKFYAIPGLRLGYLVNS 227 (356)
T ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchh--ccCCcchHHHHHhc--cCCCEEEEEechhhccCcchhheeeecC
Confidence 889999887 8889999999999999999998 55433322111111 1235788999999999888 99997
Q ss_pred CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeE
Q 040324 323 SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVM 401 (488)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 401 (488)
++++++.+...... ++ .+...+.++.+.++ ......+.+++++++.+++.+.|+++ ++.+.. +++.++
T Consensus 228 ~~~~~~~l~~~~~~--~~--~~~~~~~~a~~~l~------~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~ 296 (356)
T PRK08056 228 DDAAVARMRRQQMP--WS--INAFAALAGEVILQ------DRAYQQATWQWLAEEGARFYQALCALPLLTVWP-GRANYL 296 (356)
T ss_pred CHHHHHHHHHhCCC--Cc--hhHHHHHHHHHHhC------CHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC-CCCcEE
Confidence 56787777654321 22 44454444444442 11244566788899999999999887 666654 456777
Q ss_pred EEEeCCcchHHHHHHHHHHCCceEEeec-CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 402 PIMVYNPAKVSSFSRECLKQNVAIVTVG-FPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 402 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
++.+.. ...++++.|+++||.+.+.. |+ ....+++||++ .+.++.+.++++|++++
T Consensus 297 ~~~~~~--~~~~~~~~l~~~gI~v~~~~~f~--~~~~~~iRis~---~~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 297 FLRCER--PDIDLQRALLTQRILIRSCANYP--GLDSRYYRVAI---RSAAENERLLAALRNVL 353 (356)
T ss_pred EEEcCC--ChHHHHHHHHHCCeEEEECCCCC--CCCCCEEEEEE---cCHHHHHHHHHHHHHHH
Confidence 766643 24689999999999999732 32 22346899998 47899999999998765
No 221
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=4.3e-22 Score=198.67 Aligned_cols=318 Identities=17% Similarity=0.197 Sum_probs=216.8
Q ss_pred ceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hh
Q 040324 100 SRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SS 176 (488)
Q Consensus 100 ~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~ 176 (488)
..++||+.+ +..+. ++.+.+++.+.+... ..+ .. +...+|++.+|++++.+ +.+++++|+... ..
T Consensus 19 ~~~~~l~~~~~~~~~---p~~~~~a~~~~~~~~-~~Y-------~~-~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~ 86 (354)
T PRK06358 19 NMILDFSANINPLGV---PESLKQAITENLDKL-VEY-------PD-PDYLELRKRIASFEQLDLENVILGNGATELIFN 86 (354)
T ss_pred cceEEecCCCCCCCC---CHHHHHHHHHHHHhh-hcC-------CC-ccHHHHHHHHHHHhCCChhhEEECCCHHHHHHH
Confidence 457999754 22222 467888887776542 112 11 12479999999999874 567777777765 45
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCC-----H-HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT-----P-SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIY 250 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d-----~-~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~ 250 (488)
++.++ .+ +.|+++.|+|+.+...++..|.+++.++.+. + +++.+.+.. ..++++++.| .
T Consensus 87 ~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~v~~~~P-~ 151 (354)
T PRK06358 87 IVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAANEIVLEEIKE------------EIDLVFLCNP-N 151 (354)
T ss_pred HHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCccHHHHHhhcc------------CCCEEEEeCC-C
Confidence 55554 44 5788999999999999999999998887531 2 222222211 2455556544 8
Q ss_pred CCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEe-C
Q 040324 251 SMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAG-S 323 (488)
Q Consensus 251 s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~-~ 323 (488)
+++|...+ +++|.++|++|++++|+||+|. .|-..+........++..+..|+++||||.+|.+| ||+++ +
T Consensus 152 NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 152 NPTGQLISKEEMKKILDKCEKRNIYLIIDEAFM--DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred CCCCCccCHHHHHHHHHHHHhcCCEEEEeCccc--ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 88998775 8899999999999999999998 44333322111111223345688999999999888 99987 4
Q ss_pred HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEE
Q 040324 324 KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMP 402 (488)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 402 (488)
+.+++.+...... ++ .+.+...++.++|+. .+..++.++.++++.+.+.+.|++. |+.+..+ .+.+++
T Consensus 230 ~~~~~~~~~~~~~--~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~g~f~~ 298 (354)
T PRK06358 230 KNLAEKLLQMREP--WS--INTFADLAGQTLLDD------KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKP-SVNFIF 298 (354)
T ss_pred HHHHHHHHHhCCC--Cc--chHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-cceEEE
Confidence 7888888765432 22 555555555555531 1134667788888999999999887 6666655 455666
Q ss_pred EEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 403 IMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+.+.. ..++.++|+++||.+.+... +...+.+++||++ -++++.++++++|++++
T Consensus 299 ~~~~~---~~~~~~~l~~~gI~v~~~~~-f~~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 299 FKLEK---PIDLRKELLKKGILIRSCSN-YRGLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred EEcCc---hHHHHHHHHHCCeEEEECCC-CCCCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 66643 36899999999999997321 1222357899998 68999999999998865
No 222
>PLN02231 alanine transaminase
Probab=99.92 E-value=2.6e-22 Score=208.42 Aligned_cols=339 Identities=13% Similarity=0.125 Sum_probs=220.0
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCCcHHH-Hhhhhhccc-CCCcE
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGMGYVT-NSSILPVLM-GKGSL 187 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sGs~a-~~~~~~~~~-~~~~~ 187 (488)
+..+.+++.+.+.+... .....|+.+....+|++.+|+++.. ++.|++++|+.. ...++.++. .+||.
T Consensus 142 p~~~i~~a~~~l~~~~~---~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~ 218 (534)
T PLN02231 142 SADAIERAWQILDQIPG---RATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDG 218 (534)
T ss_pred CHHHHHHHHHHHHhcCC---ccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCE
Confidence 34445555555544211 0112234444558899999988732 256777777664 466777776 47999
Q ss_pred EEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC--
Q 040324 188 IISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK-- 258 (488)
Q Consensus 188 Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~-- 258 (488)
|+++.|.|+.+...+...|++++.++.+ |+++|++.+++...++ ...++++++ ...+++|.+.+
T Consensus 219 Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~------~~~k~ivl~-nP~NPTG~vls~e 291 (534)
T PLN02231 219 ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKG------ITVRALVVI-NPGNPTGQVLAEE 291 (534)
T ss_pred EEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcC------CCeEEEEEe-CCCCCCCcCCCHH
Confidence 9999999999999999999999888743 6889998887642211 124555555 55888898774
Q ss_pred -hHHHHHHHHHcCcEEEEEccccccccCCCCCCc---chh---cCCCCCC-ccEEEccccccc-CCcc---cEEEe---C
Q 040324 259 -LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGV---CEL---LGVDTSD-VDIMMGTFSKSF-GSYG---GYIAG---S 323 (488)
Q Consensus 259 -l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~---~~~---~~v~p~~-~di~~~t~sK~~-g~~G---g~i~~---~ 323 (488)
+++|+++|++||++||+||+|....+.. +... ... .+....+ ..+.++||||++ |.+| ||++. +
T Consensus 292 ~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~-~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~ 370 (534)
T PLN02231 292 NQRDIVEFCKQEGLVLLADEVYQENVYVP-DKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFT 370 (534)
T ss_pred HHHHHHHHHHHcCCEEEEEccchhcccCC-CCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCC
Confidence 8899999999999999999998433421 2111 111 1211122 257789999986 6677 99875 6
Q ss_pred HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHh--ccCC---CchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCC
Q 040324 324 KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVI--GEDG---SCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDND 397 (488)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~--~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 397 (488)
+++++.+..... ...+ .+.....++...++--. +... .++..++++.++++.+.+.+.|+++ |+.+..+.+
T Consensus 371 ~~l~~~l~k~~~-~~~~--s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~G 447 (534)
T PLN02231 371 SDVREQIYKVAS-VNLC--SNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEG 447 (534)
T ss_pred HHHHHHHHHHHh-hhcC--CChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCe
Confidence 888888866533 1221 33333333333331000 0000 0122345778999999999999988 888877777
Q ss_pred CCeEEEEeCCcch------------HHHHHHHHHHC-CceEEee-cCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 398 SPVMPIMVYNPAK------------VSSFSRECLKQ-NVAIVTV-GFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 398 ~~~~~~~~~~~~~------------~~~~~~~l~~~-Gi~v~~~-~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
+.++|..+..+.. ...++.+|+++ ||.++|. +|.. ..+..++|+++ ..+++++++++++|.++
T Consensus 448 gfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~-~~g~~~~Rit~--~~~~e~l~eal~RL~~~ 524 (534)
T PLN02231 448 AMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQ-VPGTWHFRCTI--LPQEDKIPAIVSRLTEF 524 (534)
T ss_pred eeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCC-CCCCCeEEEEe--CCCHHHHHHHHHHHHHH
Confidence 7776644432211 22466777765 9999983 3321 12446799987 57899999999999999
Q ss_pred HHHhCCccC
Q 040324 464 GDLVGIKYF 472 (488)
Q Consensus 464 ~~~~~~~~~ 472 (488)
++++..||+
T Consensus 525 ~~~~~~~~~ 533 (534)
T PLN02231 525 HKSFMDEFR 533 (534)
T ss_pred HHHHHHHhc
Confidence 998877764
No 223
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.92 E-value=4.8e-22 Score=199.04 Aligned_cols=319 Identities=15% Similarity=0.113 Sum_probs=215.6
Q ss_pred ceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hh
Q 040324 100 SRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SS 176 (488)
Q Consensus 100 ~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~ 176 (488)
..++||+.+ |. ++ .++.+.+++.+.+... ..+ +.. ...+|++.+|++++.+ +.+++++|+... ..
T Consensus 22 ~~~i~l~~~~n~--~~-~~~~~~~a~~~~~~~~-~~Y-------~~~-~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~ 89 (360)
T PRK07392 22 DAILDFSASINP--LG-PPESVIAAIQSALSAL-RHY-------PDP-DYRELRLALAQHHQLPPEWILPGNGAAELLTW 89 (360)
T ss_pred ccEEEeCCcCCC--CC-CCHHHHHHHHHHHHHh-hcC-------CCc-CHHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 357888744 33 22 2467788887776542 122 111 1368999999999764 567788887765 44
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCC-------HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNT-------PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI 249 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d-------~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v 249 (488)
++.++. +++.|+++.|+|..+...++..|.+++.++.++ ..++++..... +..+ ++++...
T Consensus 90 ~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~nP 157 (360)
T PRK07392 90 AGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL----------TPND-GLLLNNP 157 (360)
T ss_pred HHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc----------cCCC-EEEEeCC
Confidence 555544 678999999999999999999999999887541 23444443321 1134 4444566
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCC--cchhcCCCCCCccEEEcccccccCCcc---cEEEeCH
Q 040324 250 YSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG--VCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSK 324 (488)
Q Consensus 250 ~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~--~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~ 324 (488)
.+++|.+.+.++|.++++++++ +|+||+|. .|...+.. ..... +..+..|+++||||.||.+| ||+++++
T Consensus 158 ~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~--~~~~~~~~~s~~~~~--~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~ 232 (360)
T PRK07392 158 HNPTGKLWSREAILPLLEQFAL-VVVDEAFM--DFLPPDAEQSLIPCL--AEYPNLIILRSLTKFYSLPGLRLGYAIAHP 232 (360)
T ss_pred CCCCCCCcCHHHHHHHHHHCCE-EEEECchh--hhccCccccchHHHh--hcCCCEEEEEechhhhcCCchheeeeeCCH
Confidence 9999999999999999999986 66699998 55433321 11222 22344688999999999888 9999999
Q ss_pred HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEE
Q 040324 325 ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPI 403 (488)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 403 (488)
++++.+..... .+ +.+.+.+.++.+.|+.- +..+...+.++++.+++.+.|+++ |+.+.. .++.++++
T Consensus 233 ~~~~~~~~~~~--~~--~~s~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~fl~~ 301 (360)
T PRK07392 233 DRLQRWQQWRD--PW--PVNGLAAAAAIAALADR------DFQQQTWAWLPPAREALFQGLASLPGLTPLP-SAANFLLV 301 (360)
T ss_pred HHHHHHHhhCC--CC--CCCHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHHHHHhCCCcEECC-CCCCEEEE
Confidence 99988875442 12 26667666666665421 134455667788889999999886 776654 55666666
Q ss_pred EeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 404 MVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 404 ~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
.+.. ...++.+.+++ +||.+.+.. .+...+.+++||++. +.++.+++.+++++++
T Consensus 302 ~~~~--~~~~l~~~ll~~~gv~v~pg~-~f~~~~~~~iRi~~~---~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 302 QSQG--SALQLQEKLLQQHRILIRDCL-SFPELGDRYFRVAVR---TEAENQRLLEALAAIL 357 (360)
T ss_pred EcCC--CHHHHHHHHHhhCCEEEEeCC-CCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 5542 56688888765 599999732 223334579999983 4556677777776654
No 224
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=3.4e-22 Score=216.82 Aligned_cols=337 Identities=16% Similarity=0.182 Sum_probs=231.9
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC----CeEEeCCcHHHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP----AAIVFGMGYVTN 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~~~sGs~a~ 174 (488)
|..+|+++.+.. .++ .++.+.+++.+++.+... ..|..+....+++.+++..|.+ +.+++++|+.+.
T Consensus 696 g~~vI~LsinE~-d~p-pPp~V~eAi~eal~~~~~-------s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~el 766 (1082)
T PLN02672 696 ESSLIHMDVDES-FLP-VPSAVKASIFESFVRQNI-------SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLAL 766 (1082)
T ss_pred CCCEEEEeCCCC-CCC-CCHHHHHHHHHHHhhcCC-------CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHH
Confidence 678899875432 222 357788888887765422 1244455677888888877763 378888898876
Q ss_pred -hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE
Q 040324 175 -SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV 246 (488)
Q Consensus 175 -~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~ 246 (488)
..++.+++++||.|+++.|+|+.+...++..|++++.++.+ |.+.|++.+.+. .++.++++
T Consensus 767 L~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-----------~~~~I~L~ 835 (1082)
T PLN02672 767 FNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-----------KKPWVYIS 835 (1082)
T ss_pred HHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-----------CCCEEEEE
Confidence 46778889999999999999999999999999999998853 567777776431 13456666
Q ss_pred cCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCC-----cch---hcC-CCCCCccEEEcccccccC
Q 040324 247 EGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-----VCE---LLG-VDTSDVDIMMGTFSKSFG 314 (488)
Q Consensus 247 e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-----~~~---~~~-v~p~~~di~~~t~sK~~g 314 (488)
.|-++++|.+.+ +++|+++|++||++||+||+|+...| .+.. ..+ .++ ..+....++++||||.++
T Consensus 836 nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~F--d~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~ 913 (1082)
T PLN02672 836 GPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEY--DTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL 913 (1082)
T ss_pred CcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCcccc--CCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence 665688998775 88899999999999999999983333 2221 111 111 111224688899999999
Q ss_pred Ccc---cEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHh--ccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 315 SYG---GYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVI--GEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 315 ~~G---g~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
.+| ||++++ +++++.+..... ... .++....++.+++..+. +....+...+.++.++++.+++.+.|++.
T Consensus 914 lpGLRIGylIap~~eLi~~l~~~~~---~s~-~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 914 SGGHEFGFLALNDSVLIDAFHSAPG---LSR-PHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred cHHHHheeEEeCCHHHHHHHHHhhh---hcC-CCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 998 999986 558888875422 111 11222222222222221 00011234567777999999999999999
Q ss_pred CCeecCCCCCCeEEEEeCC-----------------cchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCH
Q 040324 389 GFEVLGDNDSPVMPIMVYN-----------------PAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTK 450 (488)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~ 450 (488)
|+.+..+.++.++++.+.. .....++++.|+++ ||.+.+..+ +. ..+++||++ ..++
T Consensus 990 Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~-FG--~~g~~RIsf--a~~~ 1064 (1082)
T PLN02672 990 GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSW-TG--IPGYCRFSF--ALED 1064 (1082)
T ss_pred CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcc-cC--CCCeEEEEe--cCCH
Confidence 9988777777777765421 12456899999987 999997432 11 247999998 4589
Q ss_pred HHHHHHHHHHHHHHHH
Q 040324 451 EDLIEALEVISRIGDL 466 (488)
Q Consensus 451 edid~~l~~l~~~~~~ 466 (488)
+++++++++|+++.+-
T Consensus 1065 e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1065 SEFDRALKAIARFKEL 1080 (1082)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987654
No 225
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.92 E-value=4.2e-22 Score=201.76 Aligned_cols=329 Identities=15% Similarity=0.140 Sum_probs=216.2
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEEeCCcH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIVFGMGY 171 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~~~sGs 171 (488)
+...+||+.+++ .+. .++.+.+++.+.++...... ..++......++++.++++++. ++.+++++|+
T Consensus 32 ~~~~~~l~~g~p-~~~-~~~~v~~a~~~~~~~~~~~~----~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~ 105 (394)
T PRK06836 32 ADNVFDFSLGNP-SVP-PPAAVKEALRELAEEEDPGL----HGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGA 105 (394)
T ss_pred CCCeEEecCcCC-CCC-CCHHHHHHHHHHHhcCCcCc----ccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCCh
Confidence 345688864332 111 23455555555544321111 1122334457888888888742 3445555554
Q ss_pred -HHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 172 -VTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 172 -~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
++...++..++.+|+.|+++.|+|..+...++..|.+++.++.+ |++++++.+.+ ..++++
T Consensus 106 ~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~------------~~~~v~ 173 (394)
T PRK06836 106 AGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITP------------KTKAVI 173 (394)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCc------------CceEEE
Confidence 55567778888999999999999999888888889999888753 57777777643 244444
Q ss_pred EEcCcCCCCCCCCC---hHHHHHHHHH------cCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC
Q 040324 245 VVEGIYSMEGELCK---LPEIITICKR------YKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS 315 (488)
Q Consensus 245 i~e~v~s~~G~~~~---l~~l~~l~~~------~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~ 315 (488)
+....+++|.+.+ +++|+++|++ ||+++|+||+|. .+...+......... .+..++++||||.+|.
T Consensus 174 -~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~ 248 (394)
T PRK06836 174 -INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYR--EIVYDGAEVPYIFKY--YDNSIVVYSFSKSLSL 248 (394)
T ss_pred -EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc--ccccCCCCCCChHHc--cCcEEEEecchhhccC
Confidence 4467888998876 7788888999 899999999998 343333222111111 2347889999999997
Q ss_pred cc---cEEEeCHHHHHH---HHh---hCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH
Q 040324 316 YG---GYIAGSKELIQY---LKY---NCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ 386 (488)
Q Consensus 316 ~G---g~i~~~~~~~~~---~~~---~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (488)
+| ||+++++++.+. +.. .... ......+++.+.++...++. ....++++++.+.+.+.|+
T Consensus 249 pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~----------~~~~~~~~~~r~~l~~~L~ 317 (394)
T PRK06836 249 PGERIGYIAVNPEMEDADDLVAALVFANRI-LGFVNAPALMQRVVAKCLDA----------TVDVSIYKRNRDLLYDGLT 317 (394)
T ss_pred cceeeEEEecCHHHhhhHHHHHHHHHHhhc-cccccCCHHHHHHHHHHhCC----------hHHHHHHHHHHHHHHHHHH
Confidence 77 999998876432 111 1111 11112444444443333221 1235667888899999999
Q ss_pred hCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 387 KMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+.|+.+..+.++.++++.++. ....++++.|.++||.+.+.. .+. ..+++||+++ .+++++++++++|++++++
T Consensus 318 ~~g~~~~~~~gg~~~~~~~~~-~~~~~~~~~l~~~gv~v~~g~-~f~--~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 318 ELGFECVKPQGAFYLFPKSPE-EDDVAFCEKAKKHNLLLVPGS-GFG--CPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred hCCCEeecCCceEEEEEeCCC-CCHHHHHHHHHhCCEEEECch-hcC--CCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 989887766667777776654 356788888988999999732 111 1368999995 6899999999999999876
Q ss_pred h
Q 040324 467 V 467 (488)
Q Consensus 467 ~ 467 (488)
+
T Consensus 392 ~ 392 (394)
T PRK06836 392 Y 392 (394)
T ss_pred h
Confidence 4
No 226
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=5.4e-22 Score=199.43 Aligned_cols=321 Identities=17% Similarity=0.172 Sum_probs=220.1
Q ss_pred cceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-h
Q 040324 99 VSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-S 175 (488)
Q Consensus 99 g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~ 175 (488)
+..++||+.+ +.+ + .++.+.+++.+..... ..+ +.... .+|++.+|++++.+ +.+++++|+... .
T Consensus 35 ~~~~i~l~~~~~~~--~-~~~~~~~al~~~~~~~-~~Y-------~~~~g-~~lr~~ia~~~~~~~~~i~~t~G~~~~l~ 102 (371)
T PRK05166 35 VPRIAKLGSNENPL--G-PSPAVRRAFADIAELL-RLY-------PDPQG-RALREAIAARTGVPADRIILGNGSEDLIA 102 (371)
T ss_pred CcceEEcCCCCCCC--C-CCHHHHHHHHHHHHHh-hcC-------CCCcH-HHHHHHHHHHhCcCHHHEEEcCCHHHHHH
Confidence 4578999754 222 2 2456666666543331 112 22222 48999999999864 567777776654 5
Q ss_pred hhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcC
Q 040324 176 SILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIY 250 (488)
Q Consensus 176 ~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~ 250 (488)
.++.++.++||.|++..|.|+.+...++..|.+++.++.+ |++++++.+++ .+++ |++....
T Consensus 103 ~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~------------~~~~-v~l~~p~ 169 (371)
T PRK05166 103 VICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVAR------------APRM-LMFSNPS 169 (371)
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc------------CCCE-EEEeCCC
Confidence 5667778999999999999999988888999999888764 67888777653 1344 4456778
Q ss_pred CCCCCCCChHHHHHHHHH--cCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEe-CH
Q 040324 251 SMEGELCKLPEIITICKR--YKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAG-SK 324 (488)
Q Consensus 251 s~~G~~~~l~~l~~l~~~--~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~-~~ 324 (488)
+++|.+.+.+++.++++. .++++|+||+|.....+........... +..+..|+++||||.+|.+| ||++. ++
T Consensus 170 NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~ 248 (371)
T PRK05166 170 NPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLK-ARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP 248 (371)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHh-hcCCCEEEEeechHhhhcchhheeeeecCCH
Confidence 899999986666666553 4889999999984332211111112111 11223688999999999888 99764 78
Q ss_pred HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEE
Q 040324 325 ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIM 404 (488)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~ 404 (488)
++++.+..... .++ .+.+..+++.+.+.. .++.++.++.++++.+++.+.|++.|+.+. +.++.++++.
T Consensus 249 ~l~~~~~~~~~--~~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~-p~~g~fl~~~ 317 (371)
T PRK05166 249 ELVGLLDRVRT--PFN--VNGAAQAAALAALDD------EEHLAKGVALALAERERLKKELAEMGYRIA-PSRANFLFFD 317 (371)
T ss_pred HHHHHHHHhcc--CCC--CCHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHHHHHHHHHCcCeeC-CCcCCEEEEe
Confidence 88888875443 223 566666566666542 124566778888888999999999888764 4456676665
Q ss_pred eCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 405 VYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+. ....++++.|+++||.+.+... +...+++||+++ +.++.++++++|++++
T Consensus 318 ~~--~~~~~l~~~l~~~gi~v~p~~~---~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 318 AR--RPASAVAEALLRQGVIVKPWKQ---PGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CC--CCHHHHHHHHHHCCeEEecCCC---CCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 43 3467899999999999987432 223579999984 6778888888887764
No 227
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=2.7e-22 Score=204.02 Aligned_cols=326 Identities=12% Similarity=0.103 Sum_probs=213.6
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccC--CCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVD--GGTLALHNELEECVARFVGKP--AAIVFGMGYVTNS 175 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~ 175 (488)
.-|+|-++ .|.. ++.+.+++.+.++.++.....+... .+.....+++++ + +++|.+ +.++.+++++++.
T Consensus 28 ~iyld~~a---~g~~--p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~ 100 (406)
T TIGR01814 28 VIYLDGNS---LGLM--PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKEDEVVVMNTLTINLH 100 (406)
T ss_pred cEEecCCC---cCcC--cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCCcEEEeCCchHHHH
Confidence 44555332 4533 6788888888887765433222211 122233344444 4 788864 3555555555555
Q ss_pred hhhhcccCC---CcEEEEeCCCchHHHHH----HHhcCCeE----EEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCC
Q 040324 176 SILPVLMGK---GSLIISDSLNHNSIVNG----ARGSGATI----RVFQHN-----TPSHLEEVLREQIAEGQPRTRRPW 239 (488)
Q Consensus 176 ~~~~~~~~~---~~~Vl~~~~~h~~~~~~----~~~~g~~v----~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~ 239 (488)
.++..+.++ ++.|+++...|++.... ++..|.++ +.++.+ |++++++.++.. ..
T Consensus 101 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~----------~~ 170 (406)
T TIGR01814 101 LLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKN----------GD 170 (406)
T ss_pred HHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhc----------CC
Confidence 556665444 34788888999986543 34457765 344322 678888877541 01
Q ss_pred ceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC-Cccc
Q 040324 240 KKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-SYGG 318 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-~~Gg 318 (488)
++.+|++..+.+.+|.+.|+++|.++|+++|+++++|++|++|... +++...++|++++|.+|+++ ++||
T Consensus 171 ~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~---------id~~~~gvD~~~~s~hK~l~g~pG~ 241 (406)
T TIGR01814 171 DIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP---------LDLHDWGVDFACWCTYKYLNAGPGA 241 (406)
T ss_pred CeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcc---------cccccCCCCEEEEcCccccCCCCCe
Confidence 4567888999999999999999999999999999999999976553 34444567999999999984 5564
Q ss_pred EEEeCHHHHHHHHhhCCC---------C----cc--------cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 040324 319 YIAGSKELIQYLKYNCPA---------H----LY--------ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIREN 377 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~---------~----~~--------~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (488)
.++..++..+.+.....+ + .+ ..+.+...+++..++|+.+... ..+...++.+++
T Consensus 242 ~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~----g~~~i~~~~~~l 317 (406)
T TIGR01814 242 GAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQA----GMEALRKKSLLL 317 (406)
T ss_pred EEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhc----CHHHHHHHHHHH
Confidence 444433333222211000 0 00 1124556777777899887422 356778889999
Q ss_pred HHHHHHHHHhC-----CCeecCCC----CCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEee-cCC
Q 040324 378 SNFFRSKLQKM-----GFEVLGDN----DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICI-SAS 447 (488)
Q Consensus 378 ~~~l~~~L~~~-----g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~-~~~ 447 (488)
.+++++.|++. |+++..+. .++++.+.+. ....++.+.|.++||.+.. ...+.+|+++ +..
T Consensus 318 ~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~--~~~~~~~~~L~~~gi~v~~-------~~~~~iRiS~~~~~ 388 (406)
T TIGR01814 318 TDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP--VPGKAVFQALIKRGVIGDK-------REPSVIRVAPVPLY 388 (406)
T ss_pred HHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec--CCHHHHHHHHHHCCEEEec-------cCCCeEEEechhcc
Confidence 99999999875 36666542 2345555544 3466888999999998752 1235899999 689
Q ss_pred CCHHHHHHHHHHHHHHH
Q 040324 448 HTKEDLIEALEVISRIG 464 (488)
Q Consensus 448 ~t~edid~~l~~l~~~~ 464 (488)
+|++|||+++++|++++
T Consensus 389 nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 389 NTFVDVYDAVNVLEEIL 405 (406)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998864
No 228
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=1.3e-22 Score=206.14 Aligned_cols=334 Identities=16% Similarity=0.203 Sum_probs=217.8
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCC--ChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHh
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG--TLALHNELEECVARFVGKP--AAIVFGMGYVTNS 175 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~ 175 (488)
+-|+|.++ .+..++.+.+++.+.++.............+ ..+..+++++.+++++|.+ .++++++|++++.
T Consensus 4 ~~yld~aa-----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~ 78 (402)
T TIGR02006 4 PIYLDYAA-----TTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNN 78 (402)
T ss_pred cEEeeCCc-----CCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHH
Confidence 45777653 2334678888888877654222110000011 1245678899999999974 4555556666775
Q ss_pred hhhhcc----cCCCcEEEEeCCCchHHHHHH---HhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 176 SILPVL----MGKGSLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 176 ~~~~~~----~~~~~~Vl~~~~~h~~~~~~~---~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
.++..+ .++++.|+++.+.|+++.... +..|.+++.++.+ |++++++.+.+ ++.+
T Consensus 79 ~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-------------~~~l 145 (402)
T TIGR02006 79 LAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRD-------------DTIL 145 (402)
T ss_pred HHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-------------CCEE
Confidence 555443 368899999999999877654 3458888888753 67788777643 3457
Q ss_pred EEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEe
Q 040324 244 VVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAG 322 (488)
Q Consensus 244 vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~ 322 (488)
|++..+.+++|.+.|+++|.++|+++|+++++|++|++|... +++....+|+++.|.+|.+|..| |+++.
T Consensus 146 v~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~G~l~~ 216 (402)
T TIGR02006 146 VSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIP---------INVNELKVDLMSISGHKIYGPKGIGALYV 216 (402)
T ss_pred EEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCccccCCCEEEEehhhhcCCCceEEEEE
Confidence 777889999999999999999999999999999999865442 12222356899889999888666 77777
Q ss_pred CHHHHHHHHhhCCC-----CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCC
Q 040324 323 SKELIQYLKYNCPA-----HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDN 396 (488)
Q Consensus 323 ~~~~~~~~~~~~~~-----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 396 (488)
+++....+.....+ .....+.+...+.+..++++.+.. ..+...++.+++.++++++|+++ ++.+.++.
T Consensus 217 ~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~-----~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~ 291 (402)
T TIGR02006 217 RRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKE-----EMAQDTAHVLALRDRLLNGIKSIEEVYLNGDL 291 (402)
T ss_pred ccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCc
Confidence 65433322221111 011123555666666688887742 45667788899999999999876 45554322
Q ss_pred --CCC-eEEEEeCCcchHHHHHHHHHHCCceEEeecCCCc----------------cCCCCeEEEeecCCCCHHHHHHHH
Q 040324 397 --DSP-VMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT----------------PLLLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 397 --~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~----------------~~~~~~iRi~~~~~~t~edid~~l 457 (488)
..+ ++.+.+. .....++...+ +++.+....+... ....+.+|++++..+|++|+|+++
T Consensus 292 ~~~~p~~~~v~f~-~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~ 368 (402)
T TIGR02006 292 EHRVPGNLNVSFN-YVEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAV 368 (402)
T ss_pred cccCCCeEEEEEe-CcCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence 122 2223232 22233454443 4666553111000 011368999999999999999999
Q ss_pred HHHHHHHHHhC
Q 040324 458 EVISRIGDLVG 468 (488)
Q Consensus 458 ~~l~~~~~~~~ 468 (488)
++|+++++.+.
T Consensus 369 ~~l~~~~~~~~ 379 (402)
T TIGR02006 369 KLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHH
Confidence 99999987763
No 229
>PRK05839 hypothetical protein; Provisional
Probab=99.92 E-value=6e-22 Score=199.15 Aligned_cols=323 Identities=15% Similarity=0.121 Sum_probs=208.8
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh----CC---CCeEEeCCcH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV----GK---PAAIVFGMGY 171 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sGs 171 (488)
|+.++||+.+.. .++. ++.+.+++.+.... ...++. ..|. .+|++.+|+++ |. ++.+++++|+
T Consensus 23 ~~~~i~l~~~~p-~~~~-~~~~~~a~~~~~~~-~~~Y~~---~~G~----~~lr~aia~~l~~~~g~~~~~~~I~it~G~ 92 (374)
T PRK05839 23 EYKGLDLTIGEP-QFET-PKFIQDALKNNAHL-LNKYPK---SAGE----ESLREAQRGFFKRRFKIELKENELIPTFGT 92 (374)
T ss_pred CCCeEEcCCCCC-CCCC-CHHHHHHHHHHhhc-cCCCCC---CCCC----HHHHHHHHHHHHHHhCCCCCcceEEEecCc
Confidence 678999975432 2221 34555555544322 112211 1133 56777776655 52 4678888887
Q ss_pred HHH-hhhhhccc--CCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 172 VTN-SSILPVLM--GKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 172 ~a~-~~~~~~~~--~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
... ..++.+++ ++++.|+++.|+|+.+...++..|++++.++.+ +++..+..++ ..+++
T Consensus 93 ~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~~-------------~~k~v 159 (374)
T PRK05839 93 REVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKELQ-------------EVDLV 159 (374)
T ss_pred HHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhhc-------------cccEE
Confidence 765 44445543 578999999999999999999999999998764 1111111111 14556
Q ss_pred EEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCC--cchhc---CCCCCCccEEEcccccccCC
Q 040324 244 VVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRG--VCELL---GVDTSDVDIMMGTFSKSFGS 315 (488)
Q Consensus 244 vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~--~~~~~---~v~p~~~di~~~t~sK~~g~ 315 (488)
+++ ..++++|.+.+ +++|+++|+++|++||+||+|. .+...+.. ..... +....+..|+++||||.||.
T Consensus 160 ~i~-nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~--~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 236 (374)
T PRK05839 160 ILN-SPNNPTGRTLSLEELIEWVKLALKHDFILINDECYS--EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSA 236 (374)
T ss_pred EEe-CCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchh--hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCC
Confidence 655 77888998775 7888889999999999999998 34221111 11111 01111346889999999998
Q ss_pred cc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee
Q 040324 316 YG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEV 392 (488)
Q Consensus 316 ~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 392 (488)
+| ||+++++++++.+.........+ .+.+.+.++.+++.. .+..++.+++++++.+.+.+.| +..
T Consensus 237 ~GlRiG~ii~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~l---~~~- 304 (374)
T PRK05839 237 PGLRSGFIAGDASILKKYKAYRTYLGCA--SPLPLQKAAAVAWLD------DEHAEFFRNIYAKNLKLAREIL---GIT- 304 (374)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcCCC--CChHHHHHHHHHhcc------chHHHHHHHHHHHHHHHHHHhc---CCC-
Confidence 88 99999999999887654322222 444444444444421 2255667788888877777655 433
Q ss_pred cCCCCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCc-cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 393 LGDNDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPAT-PLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.+.++.++++.+. ...+++++|++ +||.+.+..+... ..+.+++||+++ .+++++++++++|.++++
T Consensus 305 -~p~gg~fi~~~~~---~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 305 -IPPATFYVWLPVD---NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV--YDTPKLEKALEIIKTYLE 373 (374)
T ss_pred -CCCeeEEEEEeCC---ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHhh
Confidence 4556677777664 34678899986 7999997432211 123589999984 579999999999998764
No 230
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9.2e-22 Score=197.86 Aligned_cols=321 Identities=16% Similarity=0.143 Sum_probs=215.8
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcC--CCCCCcccCCCChhhHHHHHHHHHHHhCC---------CCeEEeC
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYS--HSTCSSRVDGGTLALHNELEECVARFVGK---------PAAIVFG 168 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~g~~~~~~~l~~~la~~~g~---------~~~i~~~ 168 (488)
..++++++|.. .++ .++.+.+++.+++.... ..+ ......+|++.+|++++. ++.++++
T Consensus 28 ~~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~Y--------~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it 97 (374)
T PRK02610 28 IQLDRLDTNEF-PYD-LPPDLKQKLAWLYQQGIESNRY--------PDGGHEALKQAIAEYVNESAAGSSQITPANISVG 97 (374)
T ss_pred cceeEecCCCC-CCC-CCHHHHHHHHHHHhhcccccCC--------CCCchHHHHHHHHHHhCccccccCCCCHHHEEEc
Confidence 35788875532 222 24678888887665521 112 112237899999999872 2467788
Q ss_pred CcHHHH-hhhhhcccCCCc-EEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 169 MGYVTN-SSILPVLMGKGS-LIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 169 sGs~a~-~~~~~~~~~~~~-~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
+|+... ..++.+++.+++ .|+++.|+|..+...++..|.+++.++.+ |+++|++.+++... +..
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~--------~~~ 169 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQN--------PPV 169 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcC--------CCc
Confidence 887765 445556566664 89999999999999999999999888742 67888887754100 124
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHH-cCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKR-YKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-- 317 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~-~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-- 317 (488)
++++++ +.++++|...+.+++.++.+- ++++||+||+|. .|.. ..... .+...+..|+++||||++|.+|
T Consensus 170 k~i~l~-~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~--~~~~--~~~~~--~~~~~~~~ivi~SfSK~~g~~GlR 242 (374)
T PRK02610 170 RVVFVV-HPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF--EFSQ--TTLVG--ELAQHPNWVILRTFSKAFRLAAHR 242 (374)
T ss_pred eEEEEe-CCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc--ccCc--cchHH--HHhcCCCEEEEEecchhccCcccc
Confidence 556666 568999998875555554421 489999999998 4432 11111 1112223578899999999888
Q ss_pred -cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC
Q 040324 318 -GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD 395 (488)
Q Consensus 318 -g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 395 (488)
||+++++++++.+...... ++ .+.+...++.++++.. +...+..++..+..+.+.+.|+++ ++.+. +
T Consensus 243 iG~~v~~~~l~~~l~~~~~~--~~--~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p 311 (374)
T PRK02610 243 VGYAIGHPELIAVLEKVRLP--YN--LPSFSQLAAQLALEHR------QELLAAIPEILQERDRLYQALQELPQLRVW-P 311 (374)
T ss_pred eeeeecCHHHHHHHHHhcCC--CC--CCHHHHHHHHHHhcCH------HHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-C
Confidence 9999999999988775532 22 4555555555555421 122223333444466778888776 66654 5
Q ss_pred CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 396 NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.++.++++.+.......++++.|.++||.+.+ ..+++||++. +.+++++++++|+++++.+
T Consensus 312 ~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~--------~~~~lRls~~---~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 312 SAANFLYLRLSQDAALAALHQALKAQGTLVRH--------TGGGLRITIG---TPEENQRTLERLQAALTQL 372 (374)
T ss_pred CcceEEEEeCCCCCCHHHHHHHHHHCCEEEEe--------CCCeEEEeCC---CHHHHHHHHHHHHHHHhhc
Confidence 56777888776555677899999999998873 1368999974 4678999999999988655
No 231
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=4e-22 Score=192.13 Aligned_cols=323 Identities=19% Similarity=0.216 Sum_probs=231.7
Q ss_pred CCccchHHHHHHHHHcCCCCCCcccCCCC--hhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhc--cc----CCC
Q 040324 116 ADEYCTPRVIDSLKKYSHSTCSSRVDGGT--LALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPV--LM----GKG 185 (488)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~--~~----~~~ 185 (488)
..|++.+++...+... .+..+|...+|. ....++.++.+|+.+|.+ +.+|++.|||+|..++.. .. +++
T Consensus 13 ~~~~v~~~m~~~~~~~-fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~ 91 (386)
T COG1104 13 VDPEVLEAMLPYLTEV-FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKG 91 (386)
T ss_pred CCHHHHHHHHHHHHhh-cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCC
Confidence 4688999999988876 233333444553 346689999999999974 466666788888665554 21 367
Q ss_pred cEEEEeCCCchHHHHHHHhc---CCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC
Q 040324 186 SLIISDSLNHNSIVNGARGS---GATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC 257 (488)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~~~~---g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~ 257 (488)
..|++..-.|+++...++.. |..|.+++.+ |+++|++.|++ ++++|-+..++++.|++.
T Consensus 92 ~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~-------------~T~LVSim~aNnE~G~IQ 158 (386)
T COG1104 92 KHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRP-------------DTILVSIMHANNETGTIQ 158 (386)
T ss_pred CeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCC-------------CceEEEEEecccCeeecc
Confidence 89999999999999998776 8888888765 89999999985 578888999999999999
Q ss_pred ChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHH-HHH-Hhh-
Q 040324 258 KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELI-QYL-KYN- 333 (488)
Q Consensus 258 ~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~-~~~-~~~- 333 (488)
|+++|.++|+++|+++++|.+|++|-+. .++....+|++..|-+|..|.-| |+++.++.+. +.+ ...
T Consensus 159 pI~ei~~i~k~~~i~fHvDAvQa~Gkip---------i~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGg 229 (386)
T COG1104 159 PIAEIGEICKERGILFHVDAVQAVGKIP---------IDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPLIHGGG 229 (386)
T ss_pred cHHHHHHHHHHcCCeEEEehhhhcCcee---------ccccccCcceEEeehhhccCCCceEEEEECCCCccCceeccCc
Confidence 9999999999999999999999966553 23322347999889999988767 8887654332 111 110
Q ss_pred -CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCCC--CCC-eEEEEeCC
Q 040324 334 -CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGDN--DSP-VMPIMVYN 407 (488)
Q Consensus 334 -~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~--~~~-~~~~~~~~ 407 (488)
..+. -+.+.|.+..++.-+++++... ..+....++....++|.+.|.+. .+.+.+.. ..| .+.+.+ .
T Consensus 230 QE~g~-RsGTenv~~Ivg~~~A~~~a~~-----~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f-~ 302 (386)
T COG1104 230 QERGL-RSGTENVPGIVGFGKAAEIAVE-----ELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSF-P 302 (386)
T ss_pred CCCCC-CCCCccHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEe-C
Confidence 0111 1233566666666667776532 45667788889999999999875 44444432 223 333333 3
Q ss_pred cchHHHHHHHHHHCCceEEeecCCCc-----------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 408 PAKVSSFSRECLKQNVAIVTVGFPAT-----------------PLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 408 ~~~~~~~~~~l~~~Gi~v~~~~~~~~-----------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
......+...|-.+||.++. |+.+. ....+.+||+++...|++|+|++++++.+++++++.
T Consensus 303 gv~gE~ll~~L~~~gI~vSt-GSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 303 GVEGESLLLALDLAGIAVST-GSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred CCcHHHHHHhccccCeEEec-cccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 44555666666667999985 22111 112368999999999999999999999999998853
No 232
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.91 E-value=8.5e-22 Score=196.81 Aligned_cols=298 Identities=19% Similarity=0.192 Sum_probs=211.5
Q ss_pred HHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-cCCCcEEEEeCCCchHHHH
Q 040324 122 PRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHNSIVN 200 (488)
Q Consensus 122 ~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-~~~~~~Vl~~~~~h~~~~~ 200 (488)
+++.+.+.+... +..+...++++.+++++|.+.++++++|++++..++.++ .++++.|+++.+.|.++..
T Consensus 3 ~~~~~~~~~~~~---------~~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~ 73 (352)
T cd00616 3 EAVEEVLDSGWL---------TLGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN 73 (352)
T ss_pred HHHHHHHHcCCc---------cCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH
Confidence 556666655211 234567899999999999988999999999998888877 5899999999999999999
Q ss_pred HHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 201 GARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 201 ~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
.+...|.+++.++.+ |++++++.+.+ ..++++++ . +.|.+.++++|+++|+++|+++|
T Consensus 74 ~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~------------~~~~v~~~-~---~~G~~~~~~~i~~l~~~~~i~li 137 (352)
T cd00616 74 AILLLGATPVFVDIDPDTYNIDPELIEAAITP------------RTKAIIPV-H---LYGNPADMDAIMAIAKRHGLPVI 137 (352)
T ss_pred HHHHcCCeEEEEecCCCcCCcCHHHHHHhcCc------------CCeEEEEE-C---CCCCcCCHHHHHHHHHHcCCeEE
Confidence 999999998887643 67788776632 24444443 3 46888899999999999999999
Q ss_pred EEccccccccCCCCCCcchhcCCCCCCccEEEcccc--cccCC-cccEEEeC-HHHHHHHHhhCC-C------------C
Q 040324 275 LDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFS--KSFGS-YGGYIAGS-KELIQYLKYNCP-A------------H 337 (488)
Q Consensus 275 ~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~s--K~~g~-~Gg~i~~~-~~~~~~~~~~~~-~------------~ 337 (488)
+|++|++|.... +. ..+.. .|+.+.|++ |.++. .||+++.+ +++.+.++.... + .
T Consensus 138 ~D~a~~~g~~~~-~~----~~~~~---~d~~~~S~~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (352)
T cd00616 138 EDAAQALGATYK-GR----KVGTF---GDAGAFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEIL 209 (352)
T ss_pred EECCCCCCCeEC-CE----EcccC---cceeEEcCCCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCCcccccee
Confidence 999999665421 11 11111 255666766 99964 45767665 677766543211 0 0
Q ss_pred cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCC-----CCeEEEEeCC--cc
Q 040324 338 LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDND-----SPVMPIMVYN--PA 409 (488)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-----~~~~~~~~~~--~~ 409 (488)
.+...+++..++.++..++.+ ++..++.+++.+++++.|+++ |+++..+.. .+++++.+.. ..
T Consensus 210 ~~~~~~~~~~aa~~~~~l~~~---------~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (352)
T cd00616 210 GYNYRLSEIQAAIGLAQLEKL---------DEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGE 280 (352)
T ss_pred eeccCcCHHHHHHHHHHHHhh---------HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCC
Confidence 112335666666666655543 567788899999999999986 676654322 2466666653 45
Q ss_pred hHHHHHHHHHHCCceEEeecCCCccC--------------------CCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 410 KVSSFSRECLKQNVAIVTVGFPATPL--------------------LLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~~~~~~--------------------~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
...++.+.|.++||.+.....|.... ..+.+|++++..+|++|+++++++|+
T Consensus 281 ~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 281 SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 67789999999999877544332110 12689999999999999999999874
No 233
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.91 E-value=9.6e-23 Score=204.23 Aligned_cols=283 Identities=20% Similarity=0.229 Sum_probs=205.7
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~ 219 (488)
..+...+||+++|++.|.+++++++||++|+..++.++.+++|.|+++.+.|+.+... ++..|.++..++.+|+++
T Consensus 38 ~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 117 (369)
T cd00614 38 GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEA 117 (369)
T ss_pred CChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 4577799999999999999999999999999999988899999999999999887643 345688898999989999
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+++ +..+|++|++.++.|.+.++++|.++|++||+++|+|++|+.+.+. + . +.
T Consensus 118 l~~~i~~-------------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~---~-~---~~--- 174 (369)
T cd00614 118 LEAAIKP-------------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ---R-P---LE--- 174 (369)
T ss_pred HHHhcCC-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC---C-h---hh---
Confidence 8887753 3446778999999999999999999999999999999999754331 1 1 11
Q ss_pred CCccEEEcccccccCCc----ccEEEeCH-HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAGSK-ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~~~-~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (488)
.+.|+++.|++|.+|+. ||++++++ ++++.++..... ++..++|..+++++..|+. ...+.++.
T Consensus 175 ~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--~g~~~~p~~a~~~l~~l~t---------l~~r~~~~ 243 (369)
T cd00614 175 LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLA--LGTILSPFDAWLLLRGLKT---------LPLRMERH 243 (369)
T ss_pred hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHh--hCCCCCHHHHHHHHcCCCC---------HHHHHHHH
Confidence 24589999999999853 58999977 888888765432 3445888877776666653 35678888
Q ss_pred HHHHHHHHHHHHhCC-Ce-ecCC----------------CCCCeEEEEeC-CcchHHHHHHHHHHCCceEEe------ec
Q 040324 375 RENSNFFRSKLQKMG-FE-VLGD----------------NDSPVMPIMVY-NPAKVSSFSRECLKQNVAIVT------VG 429 (488)
Q Consensus 375 ~~~~~~l~~~L~~~g-~~-~~~~----------------~~~~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~------~~ 429 (488)
.++.+++.+.|++.+ +. +.-+ ..+.++.+.+. ......+|.+.|.--.+.+.- +.
T Consensus 244 ~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~ 323 (369)
T cd00614 244 SENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVE 323 (369)
T ss_pred HHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeee
Confidence 999999999998874 21 1111 23678888875 334444555544321111000 00
Q ss_pred CCCc--------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 430 FPAT--------------PLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 430 ~~~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+|.. ...++.+|+++.+ ||.|.+++-|++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 324 HPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 0110 1124689999955 67777887777765
No 234
>PRK07908 hypothetical protein; Provisional
Probab=99.91 E-value=2.8e-21 Score=192.66 Aligned_cols=320 Identities=13% Similarity=0.159 Sum_probs=215.4
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~ 176 (488)
+..++||+.|.. .++ .++.+.+++.+++... ..+ +......++++.+|++++.+ +.+++++|+... ..
T Consensus 21 ~~~~~~l~~~~~-~~~-~~~~~~~~~~~~~~~~-~~Y-------~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~ 90 (349)
T PRK07908 21 GPGLLDFAVNVR-HDT-PPEWLRERLAARLGDL-AAY-------PSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFAL 90 (349)
T ss_pred CCCeEEecCCCC-CCC-CCHHHHHHHHHHhhHh-hcC-------CCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHH
Confidence 567899974321 111 2466788888777553 122 12223478999999999864 567777776654 44
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCH--HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTP--SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~--~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
++. ..++ .+++..|+|......++..|.+++.++.++- -+++ .+++ ..+ ++++....+++|
T Consensus 91 ~~~--l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~-~l~~------------~~~-~i~l~np~NPTG 153 (349)
T PRK07908 91 LAR--LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPA-AVPD------------DAD-LVVIGNPTNPTS 153 (349)
T ss_pred HHh--cCCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChh-Hhcc------------CCC-EEEEcCCCCCCC
Confidence 444 4565 4556789999988888889999988876420 0111 1211 134 455567789999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHH
Q 040324 255 ELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLK 331 (488)
Q Consensus 255 ~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~ 331 (488)
.+.+.++|.++|++ +.++|+||+|+....+ .. ......++ +..++++||||.+|.+| ||+++++++++.+.
T Consensus 154 ~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~---~~-~~l~~~~~-~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~ 227 (349)
T PRK07908 154 VLHPAEQLLALRRP-GRILVVDEAFADAVPG---EP-ESLAGDDL-PGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLT 227 (349)
T ss_pred CCcCHHHHHHHHhc-CCEEEEECcchhhccC---Cc-cccccccC-CCEEEEeecccccCCccceeeeeecCHHHHHHHH
Confidence 99999999999975 7788899999832212 11 11111222 23678899999999777 99999999999887
Q ss_pred hhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchH
Q 040324 332 YNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKV 411 (488)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (488)
..... +. .++...+++.+.++ ....++.++.+++++++.+++.+.|++.|+.+..+.++.++++.+.. .
T Consensus 228 ~~~~~--~~--~~~~~~~a~~~~~~----~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~~~~~~---~ 296 (349)
T PRK07908 228 RGRAH--WP--VGTLQLEAIAACCA----PRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVLVRVPD---A 296 (349)
T ss_pred hcCCC--CC--ccHHHHHHHHHHhc----ccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEEEECCc---H
Confidence 65442 22 44444443333222 11112456778889999999999999888888776778888887653 4
Q ss_pred HHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 412 SSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
..+.+.|.++||.+.+.. .+...+.+++||++ .+++|+++++++|++++..
T Consensus 297 ~~~~~~l~~~gI~v~~g~-~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 297 ELLRKRLRERGIAVRRGD-TFPGLDPDYLRLAV---RPRAEVPVLVQALAEILKA 347 (349)
T ss_pred HHHHHHHHhCCEEEEECC-CCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHhc
Confidence 578888888899999732 12222357999998 5789999999999887643
No 235
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.91 E-value=1.6e-21 Score=196.12 Aligned_cols=317 Identities=21% Similarity=0.286 Sum_probs=223.3
Q ss_pred CCCCCCccchHHHHHHHHHcCCCCCCcccCCC--ChhhHHHHHHHHHHHhCCCC---eEEeCCcHHHHhhhhhcc---cC
Q 040324 112 GFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG--TLALHNELEECVARFVGKPA---AIVFGMGYVTNSSILPVL---MG 183 (488)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~~---~i~~~sGs~a~~~~~~~~---~~ 183 (488)
|.+..++.+.+++.+.+.++...........+ ..+..+++++.+++++|.+. .++++++++++..++..+ ..
T Consensus 7 ~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~ 86 (371)
T PF00266_consen 7 GTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLK 86 (371)
T ss_dssp SS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGT
T ss_pred CccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccc
Confidence 44445678888988888765322211111111 34566899999999999865 455666666777777777 68
Q ss_pred CCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 184 KGSLIISDSLNHNSIVNG----ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 184 ~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
+++.|++....|++.... .+..|.++..++.+ |++++++.|.. +..+|.+..+.+..|
T Consensus 87 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~-------------~~~lv~~~~~~~~tG 153 (371)
T PF00266_consen 87 PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNP-------------DTRLVSISHVENSTG 153 (371)
T ss_dssp TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHT-------------TESEEEEESBETTTT
T ss_pred cccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhcc-------------ccceEEeeccccccc
Confidence 899999999999998733 23557888777642 78888888864 455777788888999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHHhh
Q 040324 255 ELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLKYN 333 (488)
Q Consensus 255 ~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~~~ 333 (488)
.+.|+++|.++|+++|+++++|.+|++|... .+++..++|++++|..|.+|+.| |+++.+++..+.++..
T Consensus 154 ~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~---------id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~ 224 (371)
T PF00266_consen 154 VRNPIEEIAKLAHEYGALLVVDAAQSAGCVP---------IDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPA 224 (371)
T ss_dssp BBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS-----------TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTS
T ss_pred EEeeeceehhhhhccCCceeEechhcccccc---------ccccccccceeeecccccCCCCchhhheehhhhhhccccc
Confidence 9999999999999999999999999976653 34555667999999999445567 9999999999888643
Q ss_pred CCCCc------------------c-cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCC-eec
Q 040324 334 CPAHL------------------Y-ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGF-EVL 393 (488)
Q Consensus 334 ~~~~~------------------~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~ 393 (488)
..++. + ..+.+.+...+..++++.+.. ...+++.++..++.+++++.|++++. .+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~----~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~ 300 (371)
T PF00266_consen 225 KPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEE----IGIERIRERIRELAEYLREALEELPGIEVL 300 (371)
T ss_dssp SSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHTTTEEES
T ss_pred cccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhc----cccccchhhhhhHHHHHHhhhhcCCceeEe
Confidence 32221 1 113555566666778887732 14567788899999999999999854 443
Q ss_pred CC----CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCc-c-----CCCCeEEEeecCCCCHHHHHHH
Q 040324 394 GD----NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT-P-----LLLARARICISASHTKEDLIEA 456 (488)
Q Consensus 394 ~~----~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~-----~~~~~iRi~~~~~~t~edid~~ 456 (488)
++ ....++.+.+ ......++.+.|.++||.+.. |.... + ...+.+|++++..+|++|||++
T Consensus 301 ~~~~~~~~~~i~~~~~-~~~~~~~~~~~L~~~~I~~~~-G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 301 GPDDEPRRPSIVSFNL-PGSDADDVVKYLEERGIAVST-GSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSSCGGBGTTEEEEEE-TTSSHHHHHHHHHHHTEEEEE-STTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred eecccccccceEEEee-cCCCHHHHHHHHhhcCEEEec-cCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 42 2246666666 445568899999999999986 32111 0 0127899999999999999985
No 236
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2e-21 Score=192.50 Aligned_cols=310 Identities=17% Similarity=0.202 Sum_probs=211.5
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-hh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN-SS 176 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~-~~ 176 (488)
+...+||+++.. .++ .++.+.+++.+++.+..... +. .....++++.+|++++.+ +.+++++|+... ..
T Consensus 17 ~~~~i~l~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~------Y~-~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~ 87 (337)
T PRK03967 17 GNYRIWLDKNEN-PFD-LPEELKEEIFEELKRVPFNR------YP-HITSDPLREAIAEFYGLDAENIAVGNGSDELISY 87 (337)
T ss_pred CCceEEecCCCC-CCC-CCHHHHHHHHHHhhcCcccc------CC-CCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHH
Confidence 446788875432 222 24677888887775421110 11 123478999999999864 577788887755 44
Q ss_pred hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC
Q 040324 177 ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS 251 (488)
Q Consensus 177 ~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s 251 (488)
++..+ +|+.|+++.|+|+.+...++..|.+++.++.+ |++++++.+. ..+++++ ....+
T Consensus 88 ~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-------------~~~~v~~-~~P~N 151 (337)
T PRK03967 88 LVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKAK-------------NASAVFI-CSPNN 151 (337)
T ss_pred HHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhcc-------------CCCEEEE-eCCCC
Confidence 44444 68999999999998887788889999888753 4566655321 1455554 46689
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHH
Q 040324 252 MEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQ 328 (488)
Q Consensus 252 ~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~ 328 (488)
++|.+.+.++|.++++ +++++|+||+|. .|.. ........ ..+..|+++||||.||.+| ||+++++++++
T Consensus 152 PtG~~~~~~~l~~i~~-~~~~ii~De~y~--~~~~--~~~~~~~~--~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~ 224 (337)
T PRK03967 152 PTGNLQPEEEILKVLE-TGKPVVLDEAYA--EFSG--KSLIGLID--EYPNLILLRTFSKAFGLAGIRAGYAIANEEIID 224 (337)
T ss_pred CCCCCCCHHHHHHHHh-cCCEEEEECchh--hhcc--cchHHHHh--hCCCEEEEecchHhhcchhhhheeeecCHHHHH
Confidence 9999999999999995 799999999998 4532 11111122 1233688899999999888 99999999999
Q ss_pred HHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCc
Q 040324 329 YLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNP 408 (488)
Q Consensus 329 ~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~ 408 (488)
.+...... ++ .+.+...++.++|+.. +...+.++++.++.+.+.+.|.+.. .+.++.++++.+
T Consensus 225 ~~~~~~~~--~~--~~~~~q~~~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~~~~--- 287 (337)
T PRK03967 225 ALYRIKPP--FS--LNILTMKIVRLALDHY------DLIEERIDYIIKERERVRRELGEYA----YPSDANFLLLKL--- 287 (337)
T ss_pred HHHhhcCC--CC--CCHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHHHhccCc----CCCCCcEEEEhH---
Confidence 88775542 22 5566666665555421 1334455566667777888887642 244566666543
Q ss_pred chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 409 AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.+.+.|+++||.+.+.. ....+++||++ .+.++.++++++|+++.+.++
T Consensus 288 ----~~~~~l~~~gi~v~~~~----~~~~~~~Ri~~---~~~~~~~~l~~~l~~~~~~~~ 336 (337)
T PRK03967 288 ----DAYDYLLENGIVVRKLS----GRLEGHIRVTV---GKREENDEFIKALKEIKEGYG 336 (337)
T ss_pred ----HHHHHHHHCCEEEEeCC----CCCCCeEEEec---CCHHHHHHHHHHHHHHHHhcC
Confidence 27788999999998532 12356899987 368899999999988876654
No 237
>PLN02242 methionine gamma-lyase
Probab=99.91 E-value=4.1e-22 Score=201.48 Aligned_cols=244 Identities=14% Similarity=0.150 Sum_probs=182.6
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH-----HhcCCeEEEeeCCCHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA-----RGSGATIRVFQHNTPS 218 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~-----~~~g~~v~~~~~~d~~ 218 (488)
..+...+||+.+|++.|.+.++++++|++|+..++.+++++||.|+++.+.|+.+...+ +..|.++..++..|++
T Consensus 74 ~~Pt~~~LE~~lA~l~g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e 153 (418)
T PLN02242 74 FNPTVLNLGRQMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLE 153 (418)
T ss_pred CChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHH
Confidence 35677999999999999999999999999998888899999999999999998876554 3467888778777899
Q ss_pred HHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCC
Q 040324 219 HLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVD 298 (488)
Q Consensus 219 ~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~ 298 (488)
++++++++ .++.+|+++.+.++.|.+.++++|+++|++||++||+||+|+.+.+.+ .+
T Consensus 154 ~l~~~i~~------------~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~-----~~----- 211 (418)
T PLN02242 154 AVKKAVVP------------GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP-----AR----- 211 (418)
T ss_pred HHHHhcCc------------CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH-----HH-----
Confidence 88887753 124467788999999999999999999999999999999997433221 11
Q ss_pred CCCccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCC--CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHH
Q 040324 299 TSDVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPA--HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLA 372 (488)
Q Consensus 299 p~~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~--~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~ 372 (488)
.+.|+++.|+||.+++. ||++++++++++.++..... ...+..++|..++.....++ ....+++
T Consensus 212 -~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~---------tl~~r~~ 281 (418)
T PLN02242 212 -LGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLP---------HLSLRMK 281 (418)
T ss_pred -cCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCC---------cHHHHHH
Confidence 13589999999999764 49999999998888765432 12333344444333332222 3456778
Q ss_pred HHHHHHHHHHHHHHhCCCeecCCC-------------------CCCeEEEEeCCcchHHHHHHHHH
Q 040324 373 RIRENSNFFRSKLQKMGFEVLGDN-------------------DSPVMPIMVYNPAKVSSFSRECL 419 (488)
Q Consensus 373 ~~~~~~~~l~~~L~~~g~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~l~ 419 (488)
+..++++++.+.|++.++.+..|. .+.++.+.+.....+..|++.+.
T Consensus 282 ~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~ 347 (418)
T PLN02242 282 EHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMDTEERANRLMRYLQ 347 (418)
T ss_pred HHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEECCHHHHHHHHHHhh
Confidence 899999999999999877665332 23566666754444556666665
No 238
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=2.8e-21 Score=192.88 Aligned_cols=321 Identities=13% Similarity=0.137 Sum_probs=217.5
Q ss_pred cceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhh
Q 040324 99 VSRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSI 177 (488)
Q Consensus 99 g~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~ 177 (488)
-+.+||.++. -.+|-...++++.+++.+.++.+ .+..+..+++++.+++++|.+.++++++|++++..+
T Consensus 7 ~~~~ina~g~~t~~g~s~~~~~v~~a~~~~~~~~----------~~~~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~a 76 (363)
T TIGR01437 7 LKKVINASGKMTILGVSTVSDEVADAQKRGAQNY----------FEIKELVNKTGEYIANLLGVEDAVIVSSASAGIAQS 76 (363)
T ss_pred CceEEECCcEeecCCCCCCCHHHHHHHHHHHhcC----------CCHHHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHH
Confidence 3778887542 33555555788888888887653 135577799999999999998899999999999888
Q ss_pred hhcccCCCc---------------EEEEeCCCchHH----HHHHHhcCCeEEEeeCC---CHHHHHHHHHHHHhcCCCCC
Q 040324 178 LPVLMGKGS---------------LIISDSLNHNSI----VNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRT 235 (488)
Q Consensus 178 ~~~~~~~~~---------------~Vl~~~~~h~~~----~~~~~~~g~~v~~~~~~---d~~~Le~~l~~~~~~~~p~~ 235 (488)
+.++..+|| .|+++.+.+..+ ...+.+.|++++.++.. |++++++.+.+
T Consensus 77 l~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~--------- 147 (363)
T TIGR01437 77 VAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITE--------- 147 (363)
T ss_pred HHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcCh---------
Confidence 888887777 888887655543 45677889998887643 78899988864
Q ss_pred CCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC
Q 040324 236 RRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS 315 (488)
Q Consensus 236 ~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~ 315 (488)
++++++++....+..|.+.++++|.++|++||+++|+|++|+... ..... .+.|+++.|++|++++
T Consensus 148 ---~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-----~~~~~------~g~D~~~~S~~K~l~g 213 (363)
T TIGR01437 148 ---KTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-----QKYYR------LGADLVIYSGAKAIEG 213 (363)
T ss_pred ---hceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-----HHHHH------cCCCEEEEeCCcccCC
Confidence 255555454444567888899999999999999999999997211 10111 1348899999998865
Q ss_pred -cccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeec
Q 040324 316 -YGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVL 393 (488)
Q Consensus 316 -~Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 393 (488)
.+|+++++++.++.++....+............++..++++.+.. ...+..++..++.++++++|+++ |+.+.
T Consensus 214 p~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~-----~~~~~~~~~~~~~~~l~~~L~~i~g~~~~ 288 (363)
T TIGR01437 214 PTSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS-----TGKESGAEMVAKLTPFIEALNTLKGVSAS 288 (363)
T ss_pred CceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc-----cCcccHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 368999998888876543222111111112234455566666532 22334445555677899999987 77665
Q ss_pred CCCC--C---CeEEEEeCC---cchHHHHHHHHHHCC--ceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 394 GDND--S---PVMPIMVYN---PAKVSSFSRECLKQN--VAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 394 ~~~~--~---~~~~~~~~~---~~~~~~~~~~l~~~G--i~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.+.. + ....+.+.. .....++.+.|.++| |.+++ + ....+.+|+.+. ..+++|+|.++++|.++
T Consensus 289 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~--~---~~~~~~~~l~~~-~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 289 IVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRG--Y---KANEGIIEIDPR-SVTGGQLDIIVERIREI 362 (363)
T ss_pred EecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEee--e---eecCCeEEEEee-cCCHHHHHHHHHHHHHh
Confidence 3211 1 112233322 345678999998877 55543 2 122467999986 47799999999999875
No 239
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.91 E-value=2.2e-21 Score=195.97 Aligned_cols=322 Identities=17% Similarity=0.173 Sum_probs=209.3
Q ss_pred CCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHH---HHHHhCC--CCeEEeC-CcHHHHhhhhhcc-----cCC
Q 040324 116 ADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEEC---VARFVGK--PAAIVFG-MGYVTNSSILPVL-----MGK 184 (488)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~---la~~~g~--~~~i~~~-sGs~a~~~~~~~~-----~~~ 184 (488)
.++.+.+++.+.++.+..... +...++ ......+++. +++.++. ++.++++ ++++++..++..+ ..+
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~-~~~~~~-~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~ 88 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPN-SLHQFG-TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKG 88 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCc-cccHHH-HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccC
Confidence 457788888888876433322 222222 1222344444 4445553 3445555 4555665555543 134
Q ss_pred -CcEEEEeCCCchHHHHH---HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCC
Q 040324 185 -GSLIISDSLNHNSIVNG---ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGE 255 (488)
Q Consensus 185 -~~~Vl~~~~~h~~~~~~---~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~ 255 (488)
++.|++....|+++... ++..|.+++.++.+ |++++++.+.+ ++.+|++..+.+++|.
T Consensus 89 ~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~-------------~t~lv~~~~~~n~tG~ 155 (382)
T TIGR03403 89 GKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE-------------KTALVSVMWANNETGM 155 (382)
T ss_pred CCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhccc-------------CCeEEEEEcccCCCcc
Confidence 56899998899887655 34568888888754 67777777653 2346777888899999
Q ss_pred CCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHH--HHHHh
Q 040324 256 LCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELI--QYLKY 332 (488)
Q Consensus 256 ~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~--~~~~~ 332 (488)
+.|+++|.++|+++|+++++|++|+.|... .++...++|+++.|++|.+|.+| |+++.++... ..+..
T Consensus 156 ~~~~~~I~~la~~~g~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~~~~p~~~g 226 (382)
T TIGR03403 156 IFPIKEIGEICKERGVLFHTDAVQAIGKIP---------VDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPLFHG 226 (382)
T ss_pred ccCHHHHHHHHHHcCCEEEEechhhcCCCc---------cCccccCCCEEEEcchhhCCCCceEEEEECCCCCCCCcccC
Confidence 999999999999999999999999854331 22333456899999999888777 7776554321 11100
Q ss_pred h--CCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCC---CCeEEEEeC
Q 040324 333 N--CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDND---SPVMPIMVY 406 (488)
Q Consensus 333 ~--~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~---~~~~~~~~~ 406 (488)
. ..... ..+.+.+...++.++++.+.+ ..+...+++++..+++.++|+++ ++.+..+.. ..++.+.+.
T Consensus 227 ~~~~~~~~-~gt~~~~~~~al~~al~~~~~-----~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T TIGR03403 227 GEHMGGRR-SGTLNVPYIVAMGEAMRLANE-----YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK 300 (382)
T ss_pred CCCCCCcc-cCCcChHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC
Confidence 0 00011 123556666666677776532 24566788899999999999876 677765432 234444443
Q ss_pred CcchHHHHHHHHHHCCceEEeecCCC-c---------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 407 NPAKVSSFSRECLKQNVAIVTVGFPA-T---------------PLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~~~-~---------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.....++.+.|.++||.+....... . +...+.+|++++..+|++|||+++++|++++++++
T Consensus 301 -~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 301 -GVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred -CCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3346678888888899998421100 0 11136799999999999999999999999988764
No 240
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-21 Score=193.19 Aligned_cols=307 Identities=17% Similarity=0.141 Sum_probs=215.0
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC----CCeEEeCCcHHHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK----PAAIVFGMGYVTN 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~~i~~~sGs~a~ 174 (488)
|+..+||+.+.. .++ .++.+.+++.+++.....+. + ..+...+|++.+|++++. ++.+++++|+...
T Consensus 18 ~~~~i~l~~~~~-~~~-~p~~~~~~~~~~~~~~~~~~------Y-~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 18 KRDRTYLALNEN-PFP-FPEDLVDEVFRRLNSDTLRI------Y-YDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEI 88 (335)
T ss_pred CCceeEecCCCC-CCC-CCHHHHHHHHHHhhhhhhhc------C-CCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHH
Confidence 678899874422 233 24677888877764311110 0 112347999999999983 4577788887654
Q ss_pred -hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHH-HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCC
Q 040324 175 -SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHL-EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM 252 (488)
Q Consensus 175 -~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~L-e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~ 252 (488)
..++.++ +.|+++.|+|..+...++..|.+++.++.++-..+ +..+. .+.++++....++
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~--------------~~~~i~i~nP~NP 150 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVNVG--------------EGDVVFIPNPNNP 150 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhHcc--------------CCCEEEEeCCCCC
Confidence 4555555 56889999999999999999999999886421001 00111 1245667788899
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHH
Q 040324 253 EGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQY 329 (488)
Q Consensus 253 ~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~ 329 (488)
+|...+.+++.+++ +++++||+||+|. .|. +........ ..+..++++||||++|.+| ||+++++++++.
T Consensus 151 TG~~~s~~~l~~l~-~~~~~ii~DE~Y~--~f~--~~~~~~~~~--~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~ 223 (335)
T PRK14808 151 TGHVFEREEIERIL-KTGAFVALDEAYY--EFH--GESYVDLLK--KYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDA 223 (335)
T ss_pred CCCCcCHHHHHHHH-hcCCEEEEECchh--hhc--CCchHHHHH--hCCCEEEEEechhhccCcccceEEEEeCHHHHHH
Confidence 99999999999998 5899999999998 453 111112111 1234688899999999888 999999999999
Q ss_pred HHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcc
Q 040324 330 LKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPA 409 (488)
Q Consensus 330 ~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~ 409 (488)
+...... ++ .+.+...++.++++.. +...+..+.+.++.+++.+.|++.|+.+..+ .+.++++.+.. .
T Consensus 224 l~~~~~~--~~--~~~~~q~a~~~~l~~~------~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~-~g~f~~~~l~~-~ 291 (335)
T PRK14808 224 YNRVRLP--FN--VSYVSQMFAKVALDHR------EIFEERTKFIVEERERMKSALREMGYRITDS-RGNFVFIFMEK-E 291 (335)
T ss_pred HHHhcCC--CC--CCHHHHHHHHHHHhCH------HHHHHHHHHHHHHHHHHHHHHHHCCCEECCC-CCeEEEEeCCC-c
Confidence 8765532 33 5566666666666532 1345566777788889999999999887654 56777877753 3
Q ss_pred hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 410 KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 410 ~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
...++.+.|.++||.+..+ .+++||++ -+.++.++++++|++
T Consensus 292 ~~~~~~~~l~~~Gi~V~~~--------~~~~Risi---~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 292 EKERLLEHLRAKNIAVRSF--------REGVRITI---GKREENDMILKELEV 333 (335)
T ss_pred cHHHHHHHHHHCCeEEEEC--------CCCeEEec---CCHHHHHHHHHHHHh
Confidence 3468899999999999842 15799997 568999999999875
No 241
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=6.8e-22 Score=196.95 Aligned_cols=277 Identities=19% Similarity=0.180 Sum_probs=192.0
Q ss_pred ChhhHHHHHHHHHHHhCCC----CeEEeCCcHHHHhhhhhccc--------------CCCcEEEEeCCCchHHHHHHHhc
Q 040324 144 TLALHNELEECVARFVGKP----AAIVFGMGYVTNSSILPVLM--------------GKGSLIISDSLNHNSIVNGARGS 205 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~----~~i~~~sGs~a~~~~~~~~~--------------~~~~~Vl~~~~~h~~~~~~~~~~ 205 (488)
.....+++.+.+++++|.+ ..+++++|++++..++.++. +.+..|+++.++|.++...++..
T Consensus 36 ~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~ 115 (345)
T cd06450 36 ATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL 115 (345)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHH
Confidence 3334445555566666764 58888899999876665542 12458899999999998888888
Q ss_pred CCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccc
Q 040324 206 GATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 206 g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s 280 (488)
|.+++.++.+ |+++|++.+.+...++ . +..+|++....++.|.+.++++|.++|+++|+++++|++|+
T Consensus 116 g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~------~-~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~ 188 (345)
T cd06450 116 DVKVRLVPVDEDGRMDPEALEAAIDEDKAEG------L-NPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYG 188 (345)
T ss_pred hcCeEEeeeCCCCCcCHHHHHHHHHHHHHCC------C-CcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhh
Confidence 8888888742 7999999987643322 1 23344444556678999999999999999999999999998
Q ss_pred ccccCCCCCCcchhcCCCCCCccEEEcccccccCCc-c-cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHH
Q 040324 281 IGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-G-GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVV 358 (488)
Q Consensus 281 ~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-G-g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i 358 (488)
.+.+........ ..++ .++|.+..|++|.++++ | |++..+ +.+..++++.+
T Consensus 189 ~~~~~~~~~~~~-~~~~--~~~d~~~~s~~K~l~~p~g~g~~~~~------------------------~~~~~~~l~~l 241 (345)
T cd06450 189 GFLLPFPEPRHL-DFGI--ERVDSISVDPHKYGLVPLGCSAVLVR------------------------ALKLWATLRRF 241 (345)
T ss_pred HHHhhChhhHHH-hcCc--cccCEEEEchhHhhCCCcchHHHHHH------------------------HHHHHHHHHHH
Confidence 655421110000 1111 35688888999988653 3 554333 23334445544
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCc----chHHHHHHHHHHCCceEEe-ecCCC
Q 040324 359 IGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNP----AKVSSFSRECLKQNVAIVT-VGFPA 432 (488)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Gi~v~~-~~~~~ 432 (488)
. ....++..++..++.+++.+.|+++ ++.+..++.++++.+.+... ....++.++|.++|+.+.+ ..++
T Consensus 242 ~----~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~- 316 (345)
T cd06450 242 G----RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLG- 316 (345)
T ss_pred h----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEEC-
Confidence 2 1245778889999999999999987 67766555567777766542 3456899999999665553 2221
Q ss_pred ccCCCCeEEEeecCCC-CHHHHHHHHHHHHH
Q 040324 433 TPLLLARARICISASH-TKEDLIEALEVISR 462 (488)
Q Consensus 433 ~~~~~~~iRi~~~~~~-t~edid~~l~~l~~ 462 (488)
...++|++++..+ |++|+|+++++|++
T Consensus 317 ---~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 317 ---GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ---CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 3468999998765 99999999999975
No 242
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.6e-21 Score=196.55 Aligned_cols=333 Identities=14% Similarity=0.099 Sum_probs=212.6
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------CCeEE---eCC
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------PAAIV---FGM 169 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~~~i~---~~s 169 (488)
+..+||+...+-.+. .++.+.+++.+++.+... ......|+......+|++.+|+++.. ++.++ +..
T Consensus 29 ~~~i~l~~g~~~~~~-~~~~~~~~~~~a~~~~~~--~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G 105 (404)
T PTZ00376 29 PSKVNLGIGAYRDEN-GKPYVLESVRKAEKIIAE--KNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS 105 (404)
T ss_pred cccEecccceeECCC-CCEehhhHHHHHHHHhcc--ccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence 456888733221111 233556777777644221 01112233444457999999998732 23444 334
Q ss_pred cHHHHhhh---hhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC---C----CHHHHHHHHHHHHhcCCCCCCCCC
Q 040324 170 GYVTNSSI---LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH---N----TPSHLEEVLREQIAEGQPRTRRPW 239 (488)
Q Consensus 170 Gs~a~~~~---~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~---~----d~~~Le~~l~~~~~~~~p~~~~~~ 239 (488)
|+++...+ +.+++++||.|++++|+|+.+...++..|++++.++. + |++.+++.+++. . .
T Consensus 106 ~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~---------~-~ 175 (404)
T PTZ00376 106 GTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTA---------P-N 175 (404)
T ss_pred cchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhC---------C-C
Confidence 44444333 3467899999999999999999999999999999886 2 678888877642 0 1
Q ss_pred ceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCC--CcchhcCCC-CCCccEEEccccccc
Q 040324 240 KKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGR--GVCELLGVD-TSDVDIMMGTFSKSF 313 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~--~~~~~~~v~-p~~~di~~~t~sK~~ 313 (488)
++.++++...++++|.+.. +++|+++|++||+++|+||+|. .+-..+. ......... ..+..|+++||||++
T Consensus 176 ~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~ 253 (404)
T PTZ00376 176 GSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ--GFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNM 253 (404)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc--CccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcc
Confidence 3457777888999998775 7888999999999999999998 4433221 000111111 112358889999999
Q ss_pred CCcc---cEE---EeCHHHHHHHH----hhCCCCcccCCCCHHHHHHHHHHHHHHh-ccCCCchHHHHHHHHHHHHHHHH
Q 040324 314 GSYG---GYI---AGSKELIQYLK----YNCPAHLYATSISPPAAEQIISAIQVVI-GEDGSCRGAQKLARIRENSNFFR 382 (488)
Q Consensus 314 g~~G---g~i---~~~~~~~~~~~----~~~~~~~~~~~~~p~~~aa~~a~L~~i~-~~~~~~~~~~~~~~~~~~~~~l~ 382 (488)
+.+| ||+ ++++++++.+. ..... .++ +.++..+.++.++|+.-. .+...++..+.+++++++.+.+.
T Consensus 254 ~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~-~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 331 (404)
T PTZ00376 254 GLYGERIGALHIVCANKEEAANVLSQLKLIIRP-MYS-SPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLY 331 (404)
T ss_pred cccccccceEEEEeCCHHHHHHHHHHHHHHHhh-hcC-CCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888 998 57877655442 21111 121 234455555555553100 00000123455678889999999
Q ss_pred HHHHhCCC----eecCCCCCCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHH
Q 040324 383 SKLQKMGF----EVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 383 ~~L~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l 457 (488)
+.|++.+. .+..+.++.++|+.+ ..+++++|+++ ||.+.| . + |++++. .+++++++++
T Consensus 332 ~~L~~~~~~~~~~~~~p~gg~f~~~~~-----~~~~~~~L~~~~~v~v~p----~-----~--Ris~~~-~~~~~~~~~~ 394 (404)
T PTZ00376 332 DELKALGSPGDWEHIINQIGMFSFTGL-----TKEQVERLIEKYHIYLLD----N-----G--RISVAG-LTSKNVDYVA 394 (404)
T ss_pred HHHHhcCCCCcccccccCceEEEecCC-----CHHHHHHHHHhCCEeecC----C-----C--eEEEec-cCHHhHHHHH
Confidence 99998753 334455555555543 24788899988 999884 1 2 998843 8999999999
Q ss_pred HHHHHHHHH
Q 040324 458 EVISRIGDL 466 (488)
Q Consensus 458 ~~l~~~~~~ 466 (488)
++|++++..
T Consensus 395 ~~l~~~~~~ 403 (404)
T PTZ00376 395 EAIHDVVRN 403 (404)
T ss_pred HHHHHHHhc
Confidence 999998753
No 243
>PRK14012 cysteine desulfurase; Provisional
Probab=99.90 E-value=1.3e-21 Score=198.85 Aligned_cols=332 Identities=16% Similarity=0.196 Sum_probs=210.7
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHH---cCCCCCCcccCCC--ChhhHHHHHHHHHHHhCCC--CeEEeCCcHH
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKK---YSHSTCSSRVDGG--TLALHNELEECVARFVGKP--AAIVFGMGYV 172 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~---~~~~~~~~~~~~g--~~~~~~~l~~~la~~~g~~--~~i~~~sGs~ 172 (488)
+-|+|.+ +.+..++.+.+++.+.+.. ++...... ...+ ..+..+++++.+++++|.+ .++++++|++
T Consensus 4 ~iyld~a-----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYS-----ATTPVDPRVAEKMMPYLTMDGTFGNPASRS-HRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCc-----CCCCCCHHHHHHHHHHHHhcccCcCCCchh-hHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 3466654 2333467778888777752 22111100 0011 1245678999999999975 3677777777
Q ss_pred HHhhhhhcc----cCCCcEEEEeCCCchHHHHHHH---hcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 173 TNSSILPVL----MGKGSLIISDSLNHNSIVNGAR---GSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 173 a~~~~~~~~----~~~~~~Vl~~~~~h~~~~~~~~---~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
++..++.++ .++|+.|+++...|+++..... ..|.+++.++.+ |++++++.+.+ +
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~~-------------~ 144 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMRD-------------D 144 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcCC-------------C
Confidence 776555544 4789999999999988866543 358888877643 78888887753 3
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GY 319 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~ 319 (488)
+.+|++..+.+++|.+.|+++|.++|+++|+++|+|++|++|... .++...++|+++.|++|.+|..| |+
T Consensus 145 t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~G~ 215 (404)
T PRK14012 145 TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVP---------IDLSKLKVDLMSFSAHKIYGPKGIGA 215 (404)
T ss_pred CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcc---------cCcccCCCCEEEEehhhccCCCceEE
Confidence 457778888899999999999999999999999999999865442 12222346899899999887666 77
Q ss_pred EEeCHHHHHHHHhhCCC------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 040324 320 IAGSKELIQYLKYNCPA------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEV 392 (488)
Q Consensus 320 i~~~~~~~~~~~~~~~~------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 392 (488)
++.+++....+.....+ +..+ +.+.....+.-++++.+.. +..+..++.+++.+++.+.|+++ ++.+
T Consensus 216 l~~~~~~~~~~~~~~~g~~~~~~~~~g-t~~~~~~~~l~~al~~~~~-----~~~~~~~~~~~l~~~l~~~L~~~~~i~~ 289 (404)
T PRK14012 216 LYVRRKPRVRLEAQMHGGGHERGMRSG-TLPTHQIVGMGEAARIAKE-----EMATENERIRALRDRLWNGIKDIEEVYL 289 (404)
T ss_pred EEEecCCCCCCCceecCCCccCCccCC-CcCHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 76665432222111111 1111 2334444444466665531 34556778888889999998875 3444
Q ss_pred cCCC--CC-CeEEEEeCCcchHHHHHHHHHHCCceEEe--ecCCCc--------------cCCCCeEEEeecCCCCHHHH
Q 040324 393 LGDN--DS-PVMPIMVYNPAKVSSFSRECLKQNVAIVT--VGFPAT--------------PLLLARARICISASHTKEDL 453 (488)
Q Consensus 393 ~~~~--~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~--~~~~~~--------------~~~~~~iRi~~~~~~t~edi 453 (488)
.+.. .. ....+.+... ...++...|. ++.+.. ...+.. ....+.+|++++..+|++|+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dv 366 (404)
T PRK14012 290 NGDLEQRVPGNLNVSFNYV-EGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI 366 (404)
T ss_pred eCCccccCCCEEEEEEeCc-CHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHH
Confidence 3221 11 2222333221 1235555553 444443 111110 01236899999999999999
Q ss_pred HHHHHHHHHHHHHhC
Q 040324 454 IEALEVISRIGDLVG 468 (488)
Q Consensus 454 d~~l~~l~~~~~~~~ 468 (488)
|+++++|+++++.++
T Consensus 367 d~~~~~l~~~~~~~~ 381 (404)
T PRK14012 367 DYAIELVRKSIGKLR 381 (404)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988763
No 244
>PLN02397 aspartate transaminase
Probab=99.90 E-value=4.7e-21 Score=195.33 Aligned_cols=332 Identities=14% Similarity=0.094 Sum_probs=210.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC-------Ce-----EE
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP-------AA-----IV 166 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~-------~~-----i~ 166 (488)
+...||++...+-. .+.+|.+.+++.++....... .....|+......+|++.+++++... +. ++
T Consensus 47 ~~~~l~l~~g~~p~-~~~~p~~~~~~~~a~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~ 123 (423)
T PLN02397 47 SPVKLNLGVGAYRT-EEGKPVVLNVVRKAEQRLLAG--SRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCL 123 (423)
T ss_pred CcceEecccceeeC-CCCCcccchHHHHHHHHhhcc--CCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecc
Confidence 34568877433212 112456677777775443100 11112344445589999999987431 22 22
Q ss_pred eCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC----C---CHHHHHHHHHHHHhcCCCCCCCCC
Q 040324 167 FGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH----N---TPSHLEEVLREQIAEGQPRTRRPW 239 (488)
Q Consensus 167 ~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~----~---d~~~Le~~l~~~~~~~~p~~~~~~ 239 (488)
.++|+.+....+..+..+||.|++++|+|+.+...++..|++++.++. + |++.+++.+++. ..
T Consensus 124 ~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~----------~~ 193 (423)
T PLN02397 124 SGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAA----------PD 193 (423)
T ss_pred cchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhC----------CC
Confidence 233443344444455569999999999999999999999999988864 1 677777766542 01
Q ss_pred ceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCC--Cc--chhcCCCCCCccEEEcccccc
Q 040324 240 KKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGR--GV--CELLGVDTSDVDIMMGTFSKS 312 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~--~~--~~~~~v~p~~~di~~~t~sK~ 312 (488)
++.++++...++++|.+.+ +++|+++|++||+++|+||+|. .+...+. .. ...+.-. .+..|+++||||+
T Consensus 194 ~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~--~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~ 270 (423)
T PLN02397 194 GSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQ--GFASGDLDADAQSVRMFVED-GHEILVAQSYAKN 270 (423)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccC--CccCCchhhhhHHHHHHHhc-CCcEEEEEECccc
Confidence 4567777788899998775 7888999999999999999998 4433221 11 1111111 2235888999999
Q ss_pred cCCcc---cEEE---eCHHHHHH----HHhhCCCCcccCCCCHHHHHHHHHHHHHHh-ccCCCchHHHHHHHHHHHHHHH
Q 040324 313 FGSYG---GYIA---GSKELIQY----LKYNCPAHLYATSISPPAAEQIISAIQVVI-GEDGSCRGAQKLARIRENSNFF 381 (488)
Q Consensus 313 ~g~~G---g~i~---~~~~~~~~----~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~-~~~~~~~~~~~~~~~~~~~~~l 381 (488)
++.+| ||++ +++++++. +.........+ .+...+.++.+.|+.-. .....++.++.+++++++.+.+
T Consensus 271 ~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l 348 (423)
T PLN02397 271 MGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSN--PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKL 348 (423)
T ss_pred CCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCC--CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888 9973 46665443 32322211111 33444444434442100 0000012456788999999999
Q ss_pred HHHHHhCC----CeecCCCCCCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHH
Q 040324 382 RSKLQKMG----FEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEA 456 (488)
Q Consensus 382 ~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~ 456 (488)
.+.|+++| +.+..+.++.++|+.+. .++++.|+++ ||.+.+ .+ |+++ ...++++++++
T Consensus 349 ~~~L~~~~~~~~~~~~~p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~---------~~--Ri~~-~~~~~~~i~~~ 411 (423)
T PLN02397 349 YDALEARGSPGDWSHITKQIGMFSFTGLN-----KEQVDRMTKEYHIYMTR---------DG--RISM-AGLSSKNVPYL 411 (423)
T ss_pred HHHHHhcCCCCCCCcccCCceEEEecCCC-----HHHHHHHHHhCCEEECC---------CC--eEEE-eeCCHHHHHHH
Confidence 99999987 66656666666665442 3588888876 999862 12 8888 24899999999
Q ss_pred HHHHHHHHH
Q 040324 457 LEVISRIGD 465 (488)
Q Consensus 457 l~~l~~~~~ 465 (488)
+++|+++++
T Consensus 412 ~~~i~~~~~ 420 (423)
T PLN02397 412 ADAIHAVVT 420 (423)
T ss_pred HHHHHHHHh
Confidence 999999975
No 245
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.90 E-value=2.8e-21 Score=194.43 Aligned_cols=212 Identities=17% Similarity=0.212 Sum_probs=168.3
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+||+++|++.|.+.++++++|++|+..++.++.++||.|+++.+.|+.+... +...|.++..++.+|++++
T Consensus 58 ~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l 137 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEGTEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEV 137 (391)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHH
Confidence 355689999999999999999999999999888888889999999999988765443 3456888888888888888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+.+ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++|+.+.+++ . .+ .
T Consensus 138 ~~~i~~-------------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~---~----~~---~ 194 (391)
T TIGR01328 138 KAHIKD-------------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN---P----VA---L 194 (391)
T ss_pred HHhhcc-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC---c----hh---c
Confidence 887753 34577788999999999999999999999999999999998544431 1 11 2
Q ss_pred CccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
..|+++.|++|.+|+. ||++++++++++.++........+..++|..++.++..|+.+ ..++++..+
T Consensus 195 g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl---------~~r~~~~~~ 265 (391)
T TIGR01328 195 GVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTL---------NIRMKRHSE 265 (391)
T ss_pred CCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcH---------HHHHHHHHH
Confidence 3589999999999863 488999999988887533222234457888887777766644 567788888
Q ss_pred HHHHHHHHHHhC
Q 040324 377 NSNFFRSKLQKM 388 (488)
Q Consensus 377 ~~~~l~~~L~~~ 388 (488)
+..++.+.|++.
T Consensus 266 na~~la~~L~~~ 277 (391)
T TIGR01328 266 NAMKVAEYLKSH 277 (391)
T ss_pred HHHHHHHHHHhC
Confidence 999999999875
No 246
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=4e-21 Score=191.50 Aligned_cols=278 Identities=19% Similarity=0.222 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHhCCC-CeEEeCCcHHH-HhhhhhcccCCC-cEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHH
Q 040324 148 HNELEECVARFVGKP-AAIVFGMGYVT-NSSILPVLMGKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSH 219 (488)
Q Consensus 148 ~~~l~~~la~~~g~~-~~i~~~sGs~a-~~~~~~~~~~~~-~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~ 219 (488)
..+|++.+++++|.+ +.+++++|+.. ...++.++.++| +.|++..|+|+.+...++..|++++.++.+ |+++
T Consensus 59 ~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~ 138 (351)
T PRK01688 59 PKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPA 138 (351)
T ss_pred hHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHH
Confidence 378999999999974 56777777665 466777778886 899999999999998899999999888753 5667
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGV 297 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v 297 (488)
+++.+.+ .+++++ ....+++|.+.+.+++.++++.. +.++|+||+|. .|.... .......
T Consensus 139 l~~~~~~-------------~~lv~l-~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~--~f~~~~-s~~~~~~- 200 (351)
T PRK01688 139 IADNLDG-------------VKVVYV-CSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI--EFCPQA-SLAGWLA- 200 (351)
T ss_pred HHHhccC-------------CcEEEE-eCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh--hcCCCC-ChHHHHh-
Confidence 7665421 444454 57889999999866666665532 68999999997 554221 1222222
Q ss_pred CCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 040324 298 DTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374 (488)
Q Consensus 298 ~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (488)
..+..+++.||||++|.+| ||+++++++++.+...... ++ .+.+.++++.++|+.- ..+..++.++.+
T Consensus 201 -~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~--~~--v~~~~~~~a~~~L~~~----~~~~~~~~~~~~ 271 (351)
T PRK01688 201 -EYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAP--YP--LSTPVADIAAQALSPQ----GIAAMRERVAEI 271 (351)
T ss_pred -hCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCC--CC--CCHHHHHHHHHHHhcc----hHHHHHHHHHHH
Confidence 1234688999999999888 9999999999988865443 22 5555555555555420 112455667778
Q ss_pred HHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHH
Q 040324 375 RENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDL 453 (488)
Q Consensus 375 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edi 453 (488)
.++.+++.+.|+++ ++..+.+.++.++++.+. ...++.++|+++||.++..+.. +...+++||++ .+++|+
T Consensus 272 ~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~---~~~~l~~~L~~~gi~vr~~~~~--~~~~~~iRis~---~~~~e~ 343 (351)
T PRK01688 272 NANRQWLIAALKEIPCVEQVFDSETNYILARFT---ASSAVFKSLWDQGIILRDQNKQ--PGLSNCLRITI---GTREEC 343 (351)
T ss_pred HHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHHHHHHHHHHCCeEEEECCCc--CCCCCeEEEeC---CCHHHH
Confidence 88889999999988 554344556777776654 3568999999999999863311 12247899998 378999
Q ss_pred HHHHHHH
Q 040324 454 IEALEVI 460 (488)
Q Consensus 454 d~~l~~l 460 (488)
++++++|
T Consensus 344 ~~l~~al 350 (351)
T PRK01688 344 QRVIDAL 350 (351)
T ss_pred HHHHHhh
Confidence 9999987
No 247
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=1.6e-20 Score=187.93 Aligned_cols=283 Identities=17% Similarity=0.172 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHhCCC-CeEEeCCcHHH-HhhhhhcccCCC-cEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------C
Q 040324 148 HNELEECVARFVGKP-AAIVFGMGYVT-NSSILPVLMGKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN--------T 216 (488)
Q Consensus 148 ~~~l~~~la~~~g~~-~~i~~~sGs~a-~~~~~~~~~~~~-~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~--------d 216 (488)
..+|++.+|++++.+ +.+++++|+.. ...++.++..++ +.|+++.|+|+.+...++..|.+++.++.. |
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d 140 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHAD 140 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcC
Confidence 379999999999864 46777777654 466777788888 799999999998888788889999998752 3
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHH--cCcEEEEEccccccccCCCCCCcchh
Q 040324 217 PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKR--YKAYTYLDEAHSIGAVGKTGRGVCEL 294 (488)
Q Consensus 217 ~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~--~g~~li~DE~~s~g~~g~~g~~~~~~ 294 (488)
++++++.+.. +..+++++ ....+++|.+.+.+++.++++. +++++|+||+|. .|.... .....
T Consensus 141 ~~~l~~~~~~-----------~~~~lv~l-~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~--~f~~~~-~~~~~ 205 (364)
T PRK04781 141 VPAIVAAALA-----------SNAKLVFL-CSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG--EFSDVP-SAVGL 205 (364)
T ss_pred HHHHHHHHhc-----------cCCeEEEE-cCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch--hhcCCc-chHHH
Confidence 3444333221 12444444 5788999999998777777764 479999999998 443211 11122
Q ss_pred cCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHH
Q 040324 295 LGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKL 371 (488)
Q Consensus 295 ~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~ 371 (488)
.+ ..+..|+++||||++|.+| ||+++++++++.+...... ++ .+.+...++.++|+. . ..+...+..
T Consensus 206 ~~--~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~--~~--~~~~~~~~a~~~l~~---~-~~~~~~~~~ 275 (364)
T PRK04781 206 LA--RYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAP--YP--VPTPCAALAEQALSA---P-ALAVTARRV 275 (364)
T ss_pred Hh--hCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCC--CC--CCHHHHHHHHHHHhc---c-cHHHHHHHH
Confidence 22 2234688999999999878 9999999999999876543 33 556655555555532 0 011334556
Q ss_pred HHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeec-CCCccCCCCeEEEeecCCCC
Q 040324 372 ARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVG-FPATPLLLARARICISASHT 449 (488)
Q Consensus 372 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t 449 (488)
++++++.+.+.+.|+++ ++....+.++.++++.+. ...++.+.|.++||.+.+.. |+ ...+++||++ .+
T Consensus 276 ~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~---~~~~~~~~l~~~gI~v~~~~~~~---~~~~~~Ris~---~~ 346 (364)
T PRK04781 276 AEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD---DAEAAFQALLAAGVVVRDQRAAP---RLSDALRITL---GT 346 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC---CHHHHHHHHHHCCeEEeeCCCCC---CCCCeEEEeC---CC
Confidence 67788889999999988 654334566788887764 35678899999999999743 22 2247899998 47
Q ss_pred HHHHHHHHHHHHHHH
Q 040324 450 KEDLIEALEVISRIG 464 (488)
Q Consensus 450 ~edid~~l~~l~~~~ 464 (488)
+++.++++++|+++.
T Consensus 347 ~~~~~~l~~al~~~~ 361 (364)
T PRK04781 347 PEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998764
No 248
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=8.4e-22 Score=182.48 Aligned_cols=352 Identities=14% Similarity=0.076 Sum_probs=235.8
Q ss_pred ccCCCccCCCCceEEEeeccccCCcccccccCCcceeEEeccc-cccCCCCCCccchHHHHH-HHHHcCCCCCCcccCCC
Q 040324 66 CFGRPLSSAPDAWFDVVERYSNDNNKTLKRTNNVSRCLNLGSY-NYLGFAAADEYCTPRVID-SLKKYSHSTCSSRVDGG 143 (488)
Q Consensus 66 ~~~~~i~~~~G~~~~~~dr~~~~~~~~~~~~~~g~~~ld~~s~-~~lg~~~~~~~v~~a~~~-~l~~~~~~~~~~~~~~g 143 (488)
.|..-..+.-|.|+.|+| |+.+||..+. ..+.+|-+||.+++++++ +..+.-.+-. ....+.
T Consensus 57 ~F~~dYEkS~GNYlvDvD---------------GN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRP-ALg~fP 120 (484)
T KOG1405|consen 57 HFFVDYEKSIGNYLVDVD---------------GNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRP-ALGNFP 120 (484)
T ss_pred EEehhhhhhcCceEEecC---------------CCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccc-cccCCC
Confidence 444455678899999999 9999998432 335666668888877654 2222111110 111112
Q ss_pred ChhhHHHHHHHHHHHhCC--CCeEEeCCcHHHHhhhhhccc-------------------------C---CCcEEEE-eC
Q 040324 144 TLALHNELEECVARFVGK--PAAIVFGMGYVTNSSILPVLM-------------------------G---KGSLIIS-DS 192 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~~-------------------------~---~~~~Vl~-~~ 192 (488)
..++.+.+.+.+.....+ ..++..-+|+.||+.+.+.+. . |.--|++ ..
T Consensus 121 ~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~g 200 (484)
T KOG1405|consen 121 PKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKG 200 (484)
T ss_pred hhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeecc
Confidence 334455666655555544 456677789999876655421 1 2223444 34
Q ss_pred CCchHHHHHHHhcCCeEEE------------------ee------CC------CHHHHHHHHHHHHhcCCCCCCCCCceE
Q 040324 193 LNHNSIVNGARGSGATIRV------------------FQ------HN------TPSHLEEVLREQIAEGQPRTRRPWKKI 242 (488)
Q Consensus 193 ~~h~~~~~~~~~~g~~v~~------------------~~------~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~ 242 (488)
..|+.+.....-+..+.+. +| +| +++++|++|.+.... ...++
T Consensus 201 aFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k-------~~pVa 273 (484)
T KOG1405|consen 201 AFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKK-------KKPVA 273 (484)
T ss_pred ccccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhc-------CCCeE
Confidence 5666655443332222110 11 11 577888888876322 23689
Q ss_pred EEEEcCcCCCCCCCC----ChHHHHHHHHHcCcEEEEEccccccccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc
Q 040324 243 MVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 243 ~vi~e~v~s~~G~~~----~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
++|+|||+|.+|+-. +++.|+++|+|||+.+|+||||+ +-|.||.. +.++|+++ ..+|++ ||||-|-.+
T Consensus 274 aiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQT--GgGaTGk~WaHehw~l~-~PpD~v--TFSKK~q~g- 347 (484)
T KOG1405|consen 274 AIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQT--GGGATGKFWAHEHWNLD-SPPDVV--TFSKKFQTG- 347 (484)
T ss_pred EEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeec--CCCccCceeeehhcCCC-CCccce--ehhhhhhcC-
Confidence 999999999998644 59999999999999999999999 88999987 78999996 345888 999998653
Q ss_pred cEEEeCHHHHH--HHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-----CC
Q 040324 318 GYIAGSKELIQ--YLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-----GF 390 (488)
Q Consensus 318 g~i~~~~~~~~--~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~ 390 (488)
||.-. ++++- ..+ ...+ ..+.|.-.....+++++| ..++++++....+++|..+|.++ +.
T Consensus 348 Gffh~-~~frpn~pYr---ifNT--WmGdP~k~lll~~vv~~I-------~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~ 414 (484)
T KOG1405|consen 348 GFFHD-EEFRPNEPYR---IFNT--WMGDPSKNLLLEEVVQEI-------KREDLLNNVAHVGKALLKGLLELQAKYPGK 414 (484)
T ss_pred ccccC-cccCCCchHH---Hhhh--hcCChHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHhCchh
Confidence 45432 22211 111 1112 236676666677888888 56889999999999999999876 21
Q ss_pred eecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 391 EVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.-.....+.++.+.++++..-..++..++.+|+-+.. -+...+||.|++..++...+-++++++++++.
T Consensus 415 ~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG-------Cg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 415 INNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGG-------CGDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred hhcccccceEEEEeCCChHHHHHHHHHHHHcCceecc-------cccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 1111224567777788877777899999999998762 22467999999999999999999999998764
No 249
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.89 E-value=3.5e-21 Score=194.39 Aligned_cols=212 Identities=16% Similarity=0.201 Sum_probs=169.7
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++.|.+.++++++|++|+..++.++.++||.|+++.+.|+++... ++..|+++..++..|++++
T Consensus 63 ~p~~~~Le~~iA~~~g~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l 142 (400)
T PRK06234 63 NPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEV 142 (400)
T ss_pred CccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence 355689999999999999999999999998888888899999999999999876544 4667999999998899999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGVD 298 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v~ 298 (488)
++.+.+ ++.+|+++.+.+++|.+.++++|.++|+++ |+++|+||+|+.+.++. . .+
T Consensus 143 ~~~i~~-------------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~---~----l~-- 200 (400)
T PRK06234 143 RNALKA-------------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQR---P----LQ-- 200 (400)
T ss_pred HHHhcc-------------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCC---c----hh--
Confidence 988864 234677789999999999999999999997 99999999998544331 1 11
Q ss_pred CCCccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 040324 299 TSDVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374 (488)
Q Consensus 299 p~~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (488)
.+.|+++.|++|.+++. ||++++++++++.++.......++..++|..++.++..|+.+ +.+.++.
T Consensus 201 -~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl---------~~r~~~~ 270 (400)
T PRK06234 201 -LGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTL---------QIRMEKH 270 (400)
T ss_pred -hCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcH---------HHHHHHH
Confidence 24589999999999864 499999999888876532222345568888888777777654 5677777
Q ss_pred HHHHHHHHHHHHhC
Q 040324 375 RENSNFFRSKLQKM 388 (488)
Q Consensus 375 ~~~~~~l~~~L~~~ 388 (488)
.++...+.+.|++.
T Consensus 271 ~~na~~~a~~L~~~ 284 (400)
T PRK06234 271 CKNAMKVAKFLESH 284 (400)
T ss_pred HHHHHHHHHHHHcC
Confidence 88888888888864
No 250
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.89 E-value=1.8e-20 Score=188.80 Aligned_cols=321 Identities=14% Similarity=0.163 Sum_probs=215.5
Q ss_pred cchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHH
Q 040324 119 YCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSI 198 (488)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~ 198 (488)
.+.++..+++..-..+|+ .+....+|++.+++++|.+.++.+++|++|+..++.+++++||.| ++.+.|.++
T Consensus 33 ams~~~~~a~~~gd~~Y~-------~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~ 104 (431)
T cd00617 33 AMSDYQWAAMMLGDEAYA-------GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTT 104 (431)
T ss_pred HHHHHHHHHHHhCCCccC-------CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccch
Confidence 455566666654333343 333447999999999999999999999999988888999999988 577888888
Q ss_pred HHHHHhcCCeEEEeeC---------------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc-CcCCCCCCCCC---h
Q 040324 199 VNGARGSGATIRVFQH---------------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE-GIYSMEGELCK---L 259 (488)
Q Consensus 199 ~~~~~~~g~~v~~~~~---------------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e-~v~s~~G~~~~---l 259 (488)
...+...|++++.++. -|+++|++.+.+. ...++.+|+++ +.++..|.+.+ +
T Consensus 105 ~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~---------~~~~~~~I~v~~p~N~~gG~~~s~~~l 175 (431)
T cd00617 105 RGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV---------GAENIPYIVLTITNNTAGGQPVSMANL 175 (431)
T ss_pred HHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcc---------cCCCccEEEEECCcCCCCCccCCHHHH
Confidence 8888899998877653 1688888888641 01123344444 44444587774 6
Q ss_pred HHHHHHHHHcCcEEEEEcccccc-c-c------CCCCCCcch----hcCCCCCCccEEEcccccccCC-cccEEEeCH-H
Q 040324 260 PEIITICKRYKAYTYLDEAHSIG-A-V------GKTGRGVCE----LLGVDTSDVDIMMGTFSKSFGS-YGGYIAGSK-E 325 (488)
Q Consensus 260 ~~l~~l~~~~g~~li~DE~~s~g-~-~------g~~g~~~~~----~~~v~p~~~di~~~t~sK~~g~-~Gg~i~~~~-~ 325 (488)
++|.++|++||++||.|+++..+ . + |..+....+ .+.. .|.+..|+.|.++. .||++++++ +
T Consensus 176 ~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~----sd~~~mS~~K~~~~~~GG~i~~~d~~ 251 (431)
T cd00617 176 REVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSY----ADGCTMSAKKDGLVNIGGFLALRDDE 251 (431)
T ss_pred HHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhcc----CCEEEEEeecCCCCccceEEEeCcHH
Confidence 78899999999999999998642 1 1 222222222 1222 25666677787654 478999986 6
Q ss_pred HHHHHHhhC---CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEE
Q 040324 326 LIQYLKYNC---PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMP 402 (488)
Q Consensus 326 ~~~~~~~~~---~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~ 402 (488)
+++.++... .++....++++-..+++..+|+... . .+..++..++.++|.+.|++.|+++..+.++..++
T Consensus 252 l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~------~-~~~l~~~~~~r~~l~~~L~~~G~~v~~P~Ggh~v~ 324 (431)
T cd00617 252 LYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV------E-EDYLRHRVEQVRYLGDRLDEAGVPIVEPAGGHAVF 324 (431)
T ss_pred HHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc------c-HHHHHHHHHHHHHHHHHHHHCCCCccCCCcceEEE
Confidence 888887532 1222112345544444333554321 1 23334344455999999999999999888887777
Q ss_pred EEeCCc--------chHHHHHHHHHHC-CceEEeecC---CCccC-------CCCeEEEeecC-CCCHHHHHHHHHHHHH
Q 040324 403 IMVYNP--------AKVSSFSRECLKQ-NVAIVTVGF---PATPL-------LLARARICISA-SHTKEDLIEALEVISR 462 (488)
Q Consensus 403 ~~~~~~--------~~~~~~~~~l~~~-Gi~v~~~~~---~~~~~-------~~~~iRi~~~~-~~t~edid~~l~~l~~ 462 (488)
+..... -...+++.+|+++ ||.++..|. +..|. .-..+|+.+|- ..|.+++|.+.++|.+
T Consensus 325 ~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~ 404 (431)
T cd00617 325 IDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIA 404 (431)
T ss_pred EEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHH
Confidence 765421 1366888888777 899876442 21111 13689999885 5799999999999999
Q ss_pred HHHHh
Q 040324 463 IGDLV 467 (488)
Q Consensus 463 ~~~~~ 467 (488)
+.++-
T Consensus 405 ~~~~~ 409 (431)
T cd00617 405 LYERR 409 (431)
T ss_pred HHhhH
Confidence 98663
No 251
>PLN02651 cysteine desulfurase
Probab=99.89 E-value=3.4e-21 Score=193.12 Aligned_cols=310 Identities=16% Similarity=0.181 Sum_probs=209.0
Q ss_pred CCCCCccchHHHHHHHHHcCCCCCC-cc-cCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhh----cccCC
Q 040324 113 FAAADEYCTPRVIDSLKKYSHSTCS-SR-VDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILP----VLMGK 184 (488)
Q Consensus 113 ~~~~~~~v~~a~~~~l~~~~~~~~~-~~-~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~----~~~~~ 184 (488)
.+..++.+.+++.+.+......... .. ......+..+++++.++++++.+ ..++.++|++++..++. .+.++
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~ 87 (364)
T PLN02651 8 TTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDK 87 (364)
T ss_pred CCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCC
Confidence 3434677888887777543111110 00 00112345688999999999974 35555566677644433 23578
Q ss_pred CcEEEEeCCCchHHHHHHH---hcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC
Q 040324 185 GSLIISDSLNHNSIVNGAR---GSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256 (488)
Q Consensus 185 ~~~Vl~~~~~h~~~~~~~~---~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~ 256 (488)
++.|++....|+++..... ..|.+++.++.+ |++++++.+++ ++.+|++..+.+.+|.+
T Consensus 88 g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~-------------~t~lv~v~~~~n~tG~~ 154 (364)
T PLN02651 88 KKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRP-------------DTALVSVMAVNNEIGVI 154 (364)
T ss_pred CCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCC-------------CcEEEEEECCCCCceec
Confidence 8999999999998765432 457787777653 67888887753 34577778888999999
Q ss_pred CChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHHhhCC
Q 040324 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLKYNCP 335 (488)
Q Consensus 257 ~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~~~~~ 335 (488)
.|+++|.++|+++|+++++|++|+.|.+. ++++..++|+++.|.+|.+|..| |+++.+++..+.+.....
T Consensus 155 ~~l~~I~~~~~~~g~~~~vD~a~~~g~~~---------~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~ 225 (364)
T PLN02651 155 QPVEEIGELCREKKVLFHTDAAQAVGKIP---------VDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMS 225 (364)
T ss_pred ccHHHHHHHHHHcCCEEEEEcchhhCCcc---------cCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCcccc
Confidence 99999999999999999999999965443 23444557999999999766566 888877765544332111
Q ss_pred ------CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh-C-CCeecCCCC-----CCeEE
Q 040324 336 ------AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK-M-GFEVLGDND-----SPVMP 402 (488)
Q Consensus 336 ------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~-g~~~~~~~~-----~~~~~ 402 (488)
.+. ..+.+...+.+..++|+.+.. ..++..++.++..+++++.|++ + |+++..+.. ..++.
T Consensus 226 g~~~~~~~~-~GT~~~~~~~~l~~al~~~~~-----~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~ 299 (364)
T PLN02651 226 GGGQERGRR-SGTENTPLVVGLGAACELAMK-----EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLN 299 (364)
T ss_pred CCCccCCcc-CCCccHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEE
Confidence 111 223566677777889988742 3467778889999999999986 3 788876421 23555
Q ss_pred EEeCCcchHHHHHHHHHHCCceEEeecCCC-cc----------------CCCCeEEEeecCCCCHHHHH
Q 040324 403 IMVYNPAKVSSFSRECLKQNVAIVTVGFPA-TP----------------LLLARARICISASHTKEDLI 454 (488)
Q Consensus 403 ~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~-~~----------------~~~~~iRi~~~~~~t~edid 454 (488)
+.+. .....++.+.|.+ |.+.. |..+ .+ ...+.+|++++..+|++|||
T Consensus 300 ~~~~-~~~~~~~~~~L~~--i~v~~-g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 300 LSFA-YVEGESLLMGLKE--VAVSS-GSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred EEeC-CCCHHHHHHHhCC--EEEEc-hhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 5553 3456678888855 66653 2211 10 01368999999999999986
No 252
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=1e-21 Score=185.26 Aligned_cols=326 Identities=17% Similarity=0.115 Sum_probs=216.6
Q ss_pred EEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc
Q 040324 103 LNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM 182 (488)
Q Consensus 103 ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~ 182 (488)
+||.|-++-+ .+|++.+++.++-... ...||..+...++++.+++.++++.++|+.|||+||..++.+.+
T Consensus 2 ~~f~SDn~~g---~~~~m~eam~~a~~~~-------~~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~ 71 (342)
T COG2008 2 IDFRSDNVAG---PTPEMREALAAANAVG-------DDVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHC 71 (342)
T ss_pred CccccCccCC---CCHHHHHHHHhccccC-------CCCCCCCHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhc
Confidence 4666544433 3577777776653211 13568999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCchHHHHH--HH-hcCCeEEEeeC-C----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 183 GKGSLIISDSLNHNSIVNG--AR-GSGATIRVFQH-N----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 183 ~~~~~Vl~~~~~h~~~~~~--~~-~~g~~v~~~~~-~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
+|+..|++....|-.+... .. .++.....+.. + ++++++..++.. +. |.+ .+..++.+.-.+..|
T Consensus 72 ~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~--d~----~~~-~~~~~~~e~~~te~G 144 (342)
T COG2008 72 QPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPD--DI----HHA-PTPLAVLENTATEGG 144 (342)
T ss_pred CCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCC--Cc----ccC-CCceEEEeeccCCCc
Confidence 9999999999999776643 22 23333333332 2 799999988751 11 112 222344444444567
Q ss_pred CCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHH
Q 040324 255 ELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYL 330 (488)
Q Consensus 255 ~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~ 330 (488)
++.+ |++|.++||++|+.|++|.+.-..+.-.-|....++ ...+|++..++||.++.++ +.++++.++++.+
T Consensus 145 tVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~----~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a 220 (342)
T COG2008 145 TVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTI----KSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRA 220 (342)
T ss_pred eecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHH----HhhCCEEEEecccCCcceeeeEEEcCHHHHHHH
Confidence 6665 788899999999999999997432332222222222 2456888889999998866 7778999998877
Q ss_pred HhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcc
Q 040324 331 KYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPA 409 (488)
Q Consensus 331 ~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~ 409 (488)
+..........+-.-+.+++.+..|+.- -....-.+..+++++|.+.|++. |+++..++.++++.+.+....
T Consensus 221 ~~~rK~~Ggl~~k~r~laA~~~~~l~~~-------~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~ 293 (342)
T COG2008 221 RRWRKRAGGLMRKARFLAAQGLYALEDD-------VWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA 293 (342)
T ss_pred HHHHHHhcccHhhhhHHHHHHHHHHhcc-------HHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH
Confidence 6543221222223344555566665531 11122223344589999999954 999988778888877776432
Q ss_pred h-HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 410 K-VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 410 ~-~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
. .......+.++|+++.+.+ ..+||+.|...|++|||+++..+++++
T Consensus 294 i~~l~~~~~~~~~~~~~~~~~--------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 IEALRLAGALFYRGVLIGAHG--------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHhhchhheeeeeccCCC--------ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 2 2223333444455554211 379999999999999999999998764
No 253
>PRK05968 hypothetical protein; Provisional
Probab=99.89 E-value=7.5e-21 Score=191.32 Aligned_cols=285 Identities=16% Similarity=0.184 Sum_probs=201.9
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHH----HHHHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~----~~~~~~g~~v~~~~~~d~~~ 219 (488)
..+...+||+++|++.|.+.+++++||+.|+..++.++.++||.|++..+.|+.+. ..+...|.++..++.+|+++
T Consensus 61 ~~p~~~~le~~lA~l~g~~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (389)
T PRK05968 61 DNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEA 140 (389)
T ss_pred CChhHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHH
Confidence 34557899999999999999999999999988788888899999999999988764 33555689999888888998
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+.+ ++ +|++|.+.+..+.+.++++|.++|++||+++|+|++|+.+.+.. . + .
T Consensus 141 l~~~i~~-------------tk-lV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~---p------~-~ 196 (389)
T PRK05968 141 VAKALPG-------------AK-LLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQR---P------I-T 196 (389)
T ss_pred HHHhccc-------------CC-EEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccC---c------h-h
Confidence 8877621 34 56667777777888899999999999999999999997443321 1 1 1
Q ss_pred CCccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
.+.|+++.|++|.++++ ||++++++++++.++.....+ .+..++|..++.++..|+.+ ..+.++..
T Consensus 197 ~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~-~g~~~~~~~A~~~l~~L~tl---------~~r~~~~~ 266 (389)
T PRK05968 197 LGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGAKLSPFEAWLLLRGLRTL---------PLRMKAHE 266 (389)
T ss_pred cCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHh-CCCCCChHHHHHHHcccCcH---------HHHHHHHH
Confidence 23489999999999863 488899999888776532211 22447787777776666644 56777778
Q ss_pred HHHHHHHHHHHhC-CCeecC-C-----------CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCC----------
Q 040324 376 ENSNFFRSKLQKM-GFEVLG-D-----------NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPA---------- 432 (488)
Q Consensus 376 ~~~~~l~~~L~~~-g~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~---------- 432 (488)
++.+.+.+.|++. ++..+. + ..+.++.+.+.......+|++.|...++.+.-.++..
T Consensus 267 ~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~ 346 (389)
T PRK05968 267 ASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQ 346 (389)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCccccc
Confidence 8899999999876 343222 2 1134677776544456688888876555443211111
Q ss_pred --c------c--CCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 433 --T------P--LLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 433 --~------~--~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
. . ..++.+|+++.+..+++-++.+-.+|++
T Consensus 347 ~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~ 386 (389)
T PRK05968 347 QKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred ccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHH
Confidence 0 0 1147899999766655544544444443
No 254
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=2.1e-20 Score=186.70 Aligned_cols=278 Identities=16% Similarity=0.186 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHhCCC-CeEEeCCcHHH-HhhhhhcccCCC-cEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHH
Q 040324 148 HNELEECVARFVGKP-AAIVFGMGYVT-NSSILPVLMGKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSH 219 (488)
Q Consensus 148 ~~~l~~~la~~~g~~-~~i~~~sGs~a-~~~~~~~~~~~~-~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~ 219 (488)
..+|++.+|+++|.+ +.+++++|+.. ...++.++..+| +.|+++.|+|..+...++..|++++.++.+ |++.
T Consensus 62 ~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~ 141 (354)
T PRK04635 62 PPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDY 141 (354)
T ss_pred HHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHH
Confidence 379999999999874 57778887765 466777788888 899999999999888888899999998864 3444
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHc-CcEEEEEccccccccCCCCCCcchhcCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRY-KAYTYLDEAHSIGAVGKTGRGVCELLGVD 298 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~-g~~li~DE~~s~g~~g~~g~~~~~~~~v~ 298 (488)
+++ +. ..+++++ ....+++|.+.+.+++.++++.. +++||+||+|. .|.... .......
T Consensus 142 l~~-~~-------------~~~li~i-~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~--~~~~~~-s~~~~~~-- 201 (354)
T PRK04635 142 IEQ-LD-------------GAKLVFI-CNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI--EFCPEY-SVADLLA-- 201 (354)
T ss_pred HHh-cc-------------CCCEEEE-eCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH--hhccCc-chHHHHh--
Confidence 431 11 1455554 58899999999999999888764 79999999998 444221 1222211
Q ss_pred CCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 299 TSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 299 p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
..+..+++.||||++|.+| ||+++++++++.+...... ++ .+.+...++.++|..- +.+...+..++++
T Consensus 202 ~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~--~~--~~~~~~~~a~~~l~~~----~~~~~~~~~~~~~ 273 (354)
T PRK04635 202 SYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAP--YP--VPLPVSEIATQALSEA----GLARMKFQVLDLN 273 (354)
T ss_pred hCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCC--CC--CCHHHHHHHHHHHhcc----cHHHHHHHHHHHH
Confidence 1233578899999999878 9999999999988754332 22 5555555555555321 1123455667788
Q ss_pred HHHHHHHHHHHhCC-CeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHH
Q 040324 376 ENSNFFRSKLQKMG-FEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLI 454 (488)
Q Consensus 376 ~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid 454 (488)
++.+++.+.|++++ +.+..+ .+.++++.+. ...++.+.|.++||.+...+. +...+++||++ .+++|++
T Consensus 274 ~~r~~l~~~L~~~~~~~~~~~-~g~f~~~~~~---~~~~~~~~l~~~gv~v~~~~~---~~~~~~lRis~---~~~e~~~ 343 (354)
T PRK04635 274 AQGARLQAALSMYGGAKVLEG-NGNYVLAKFD---DVDAVFKALWDAGIVARAYKD---PRLANCIRFSF---SNRAETD 343 (354)
T ss_pred HHHHHHHHHHHhCCCceECCC-CCcEEEEECC---CHHHHHHHHHHCCEEEEECCC---CCCCCeEEEEe---CCHHHHH
Confidence 88899999999886 666644 4566666554 355788889999999985321 22346899997 4899999
Q ss_pred HHHHHHHHH
Q 040324 455 EALEVISRI 463 (488)
Q Consensus 455 ~~l~~l~~~ 463 (488)
+++++|++.
T Consensus 344 ~l~~al~~~ 352 (354)
T PRK04635 344 KLIGLIRNQ 352 (354)
T ss_pred HHHHHHHHh
Confidence 999999753
No 255
>PRK08354 putative aminotransferase; Provisional
Probab=99.89 E-value=4.6e-20 Score=180.80 Aligned_cols=293 Identities=16% Similarity=0.188 Sum_probs=187.5
Q ss_pred ceeEEeccc-cccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHH-hhh
Q 040324 100 SRCLNLGSY-NYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTN-SSI 177 (488)
Q Consensus 100 ~~~ld~~s~-~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~-~~~ 177 (488)
..+|||+.+ |++ + ++.+.+++.++++... .+ +....+++.++++++. .+++++|+... ..+
T Consensus 8 ~~~i~l~~~~np~--~--p~~~~~a~~~~~~~~~-~y----------p~~~~l~~~ia~~~~~--~I~vt~G~~~al~~~ 70 (311)
T PRK08354 8 EGLIDFSASVNPY--P--PEWLDEMFERAKEISG-RY----------TYYEWLEEEFSKLFGE--PIVITAGITEALYLI 70 (311)
T ss_pred cceeEecCCCCCC--C--CHHHHHHHHHHHHHhh-cC----------CChHHHHHHHHHHHCC--CEEECCCHHHHHHHH
Confidence 468999865 433 2 4677788877665431 11 1136799999999984 46677776654 434
Q ss_pred hhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC
Q 040324 178 LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC 257 (488)
Q Consensus 178 ~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~ 257 (488)
+ .+..+|+.|+++.|+|+.+...++..|.++..++ .|++.+++.+++ ++.++++.| .+++|.+.
T Consensus 71 ~-~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~-~d~~~l~~~~~~-------------~~~vi~~~P-~NPTG~~~ 134 (311)
T PRK08354 71 G-ILALRDRKVIIPRHTYGEYERVARFFAARIIKGP-NDPEKLEELVER-------------NSVVFFCNP-NNPDGKFY 134 (311)
T ss_pred H-HhhCCCCeEEEeCCCcHHHHHHHHHcCCEEeecC-CCHHHHHHhhcC-------------CCEEEEecC-CCCCCCcc
Confidence 4 4445899999999999999999999999987764 367777766542 345555544 78899877
Q ss_pred C---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHH
Q 040324 258 K---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLK 331 (488)
Q Consensus 258 ~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~ 331 (488)
+ +++|+++|+++|+++|+||+|. .|...+.. .. .+..++++||||++|.+| ||+++ ..+.++
T Consensus 135 ~~~~l~~l~~~a~~~~~~li~De~y~--~f~~~~~~------~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~ 202 (311)
T PRK08354 135 NFKELKPLLDAVEDRNALLILDEAFI--DFVKKPES------PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFR 202 (311)
T ss_pred CHHHHHHHHHHhhhcCcEEEEeCcch--hccccccc------cC-CCcEEEEeccHhhcCCccceeeeeee---hHHHHH
Confidence 6 7788888999999999999998 44332211 11 335788999999999888 99998 455565
Q ss_pred hhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcch
Q 040324 332 YNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPAK 410 (488)
Q Consensus 332 ~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~ 410 (488)
..... +. .+....+++.+.++- . .++++++.+.+++..+.+ +.... ++.+.++++.+. .
T Consensus 203 ~~~~~--~~--~~~~~~~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~~---~ 262 (311)
T PRK08354 203 SVRMP--WS--IGSTGYAFLEFLIED--------D----FEHLRKTMPLIWREKERFEKALYV-KSDANFFIKDVG---D 262 (311)
T ss_pred HcCCC--cc--CCHHHHHHHHHHHHh--------H----HHHHHHHHHHHHHHHHHHHHhcCC-CCCCcEEEEECC---C
Confidence 44332 22 334333333222220 1 112222223233222222 11112 334555555432 3
Q ss_pred HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 411 VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
..++++.|.++||.+.+..... ..+++||++ .+.++.++++++|+++
T Consensus 263 ~~~~~~~l~~~gv~v~~g~~f~---~~~~iRi~~---~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 263 AEKFVEFLKRNGILVRDCTSFG---LPGYIRFSV---RDREENEKLIRALREW 309 (311)
T ss_pred HHHHHHHHHHCCeEEEecccCC---CCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 5679999999999999843221 137999998 4677788888888764
No 256
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.89 E-value=1.9e-20 Score=193.24 Aligned_cols=298 Identities=17% Similarity=0.189 Sum_probs=200.5
Q ss_pred CCCChhhHHHHHHHHHHHhCCCCe-EEeCCcHHHHhhh---hhc-ccCCCc----EEEEeCCCchHHHHHHHhcCCeEEE
Q 040324 141 DGGTLALHNELEECVARFVGKPAA-IVFGMGYVTNSSI---LPV-LMGKGS----LIISDSLNHNSIVNGARGSGATIRV 211 (488)
Q Consensus 141 ~~g~~~~~~~l~~~la~~~g~~~~-i~~~sGs~a~~~~---~~~-~~~~~~----~Vl~~~~~h~~~~~~~~~~g~~v~~ 211 (488)
..|..+...++++.+++++|.+.+ +..++|+.+.... ++. +..+|+ .|+++.+.|+++...++..|.+++.
T Consensus 108 sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~ 187 (481)
T PRK04366 108 VQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVE 187 (481)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEE
Confidence 346667778999999999998764 4445676655332 322 344444 8999999999999999999999998
Q ss_pred eeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCC-CChHHHHHHHHHcCcEEEEEccccccccC
Q 040324 212 FQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL-CKLPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 212 ~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~-~~l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
++.+ |+++|++.+.+ .++++++. ... ..|.+ .++++|.++|+++|+++++|++|..+.+|
T Consensus 188 v~~~~~~~~D~e~L~~~i~~------------~t~~V~v~-~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g 253 (481)
T PRK04366 188 IPSNEDGLVDLEALKAAVGE------------DTAALMLT-NPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG 253 (481)
T ss_pred eecCCCCCcCHHHHHhhccc------------CCeEEEEe-CCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcc
Confidence 8753 77888877753 24444444 333 56776 48999999999999999999999755444
Q ss_pred CCCCCcchhcCCCCCCccEEEcccccccCC------cc-cEEEeCHHHHHHHHhh-----CCCCcc------------cC
Q 040324 286 KTGRGVCELLGVDTSDVDIMMGTFSKSFGS------YG-GYIAGSKELIQYLKYN-----CPAHLY------------AT 341 (488)
Q Consensus 286 ~~g~~~~~~~~v~p~~~di~~~t~sK~~g~------~G-g~i~~~~~~~~~~~~~-----~~~~~~------------~~ 341 (488)
.. .....++|+++++.+|+||+ +| |+++.++++.+.+... ...+.. .+
T Consensus 254 ~~--------~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~ 325 (481)
T PRK04366 254 KA--------RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAF 325 (481)
T ss_pred cC--------CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccc
Confidence 22 11123458999999999863 23 7888888777665210 001111 11
Q ss_pred CCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEE-EEeCC------cchHHHH
Q 040324 342 SISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMP-IMVYN------PAKVSSF 414 (488)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~-~~~~~------~~~~~~~ 414 (488)
+.+...+.++...+..+ +.+..++..++..+++++|+++|+++ +++..+ .+.+. +.+.. .....++
T Consensus 326 t~~~l~~~~a~~~l~~~----G~~Gl~~~a~~~~~~a~~l~~~L~~~-~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~v 398 (481)
T PRK04366 326 YGNFGVLVRAYAYIRSL----GAEGLREVSEDAVLNANYLKARLKDI-YDLPYD--RPCMHEFVLSGKKLKETGVRTLDI 398 (481)
T ss_pred cCchHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhHhh-CcccCC--CCeeEEEEEECccccccCCCHHHH
Confidence 12333344444444444 33344566677788899999999987 444322 22221 11211 1256789
Q ss_pred HHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 415 SRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 415 ~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
.++|.++||.+....+|... .+.+|++++..+|++|||+++++|+++.++...
T Consensus 399 ~~~L~~~Gi~~~~~~~p~~~--~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~ 451 (481)
T PRK04366 399 AKRLLDYGFHPPTIYFPLIV--PEALMIEPTETESKETLDAFIAAMKQIAEEAKE 451 (481)
T ss_pred HHHHHHCCccCCcccccccc--CCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999987644444332 468999999999999999999999999887643
No 257
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.6e-19 Score=175.63 Aligned_cols=326 Identities=22% Similarity=0.263 Sum_probs=234.7
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--CeE-EeCCcHHHHhhhhhcccCCCcEEEEeC-
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP--AAI-VFGMGYVTNSSILPVLMGKGSLIISDS- 192 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i-~~~sGs~a~~~~~~~~~~~~~~Vl~~~- 192 (488)
|-.+.+.+.+++.+-..+..+. -......++.+.+...++.+ +++ +.+||+.+.++++..+..|||.|++-.
T Consensus 13 P~~v~~~V~~am~~~~~~h~s~----~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~n 88 (383)
T COG0075 13 PVPVPPRVLLAMARPMVGHRSP----DFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVN 88 (383)
T ss_pred CCCCCHHHHHHhcCCCCCCCCH----HHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeC
Confidence 3445566666665533332111 13456688888888999876 444 446888888999999999999887754
Q ss_pred CCchH-HHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHH
Q 040324 193 LNHNS-IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITIC 266 (488)
Q Consensus 193 ~~h~~-~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~ 266 (488)
+.|+. +...++..|+++..+... |++++++.|++. +..+ +|.+-..=+.+|...|+++|.++|
T Consensus 89 G~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~----------~~~~-~V~~vH~ETSTGvlnpl~~I~~~~ 157 (383)
T COG0075 89 GKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKD----------PDIK-AVAVVHNETSTGVLNPLKEIAKAA 157 (383)
T ss_pred ChHHHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcC----------CCcc-EEEEEeccCcccccCcHHHHHHHH
Confidence 44444 344577788988887644 899999999852 1223 333333345568888999999999
Q ss_pred HHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cc-cEEEeCHHHHHHHHhhCCC--------
Q 040324 267 KRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YG-GYIAGSKELIQYLKYNCPA-------- 336 (488)
Q Consensus 267 ~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~~~~~~~~~~~~~~~-------- 336 (488)
++||+++|+|.+-|+|+.. +.++..++|+++++--|+++. +| |++..+++..+.+....+.
T Consensus 158 k~~g~l~iVDaVsS~Gg~~---------~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~ 228 (383)
T COG0075 158 KEHGALLIVDAVSSLGGEP---------LKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKK 228 (383)
T ss_pred HHcCCEEEEEecccCCCcc---------cchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHH
Confidence 9999999999999977664 456666789999999999976 67 8999998887777543222
Q ss_pred --------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC--CCCeE-EEEe
Q 040324 337 --------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN--DSPVM-PIMV 405 (488)
Q Consensus 337 --------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~-~~~~ 405 (488)
..+..+.+.....+..++|+.|..+ ..+++.++.+++.++++++++++|+++..++ .++.+ .+..
T Consensus 229 ~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~E----Gle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~ 304 (383)
T COG0075 229 WLKYMEKKGSTPYTPPVNLIYALREALDLILEE----GLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKV 304 (383)
T ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEEC
Confidence 1122236666777888899998543 5688999999999999999999999987732 23333 3444
Q ss_pred CCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCC
Q 040324 406 YNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYFP 473 (488)
Q Consensus 406 ~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~ 473 (488)
+......++...++++ |+.+.. ...+.....+||..-...+.+|+..++.+|+.++.+++.+...
T Consensus 305 P~g~~~~~~~~~~~~~~g~~i~g---g~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~~~ 370 (383)
T COG0075 305 PEGVDDKKVRRALLKEYGVEIAG---GQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKVEA 370 (383)
T ss_pred CCCCCcHHHHHHHHHhCCEEecc---cccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCcccc
Confidence 4444444455567776 888874 2233445799999888999999999999999999999875443
No 258
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.89 E-value=9.6e-21 Score=190.61 Aligned_cols=284 Identities=16% Similarity=0.150 Sum_probs=200.3
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHh----cCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARG----SGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~----~g~~v~~~~~~d~~~L 220 (488)
.+...+|++.+|++.|.+++++++||+.|+..++.+++++||.|+++.+.|+.+...+.. .|..+..++..|++++
T Consensus 60 ~pt~~~Le~~lA~l~G~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l 139 (386)
T PRK06767 60 NPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADI 139 (386)
T ss_pred CcchHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHH
Confidence 345689999999999999999999999988888888899999999999999887665433 2455555555678888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+||+|+.+.++. . +. .
T Consensus 140 ~~~i~~-------------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---p------l~-~ 196 (386)
T PRK06767 140 ENKIRP-------------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQR---P------LE-L 196 (386)
T ss_pred HHhhCc-------------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCC---c------hh-c
Confidence 877653 34477778999999999999999999999999999999997443331 1 11 2
Q ss_pred CccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
+.|+++.|++|.+++. ||+++++++.++.+...... ..+..++|..++.++..|+.+ ..++++.++
T Consensus 197 g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~-~~g~~~~~~~a~l~~~~L~tl---------~~r~~~~~~ 266 (386)
T PRK06767 197 GCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRK-DIGGIMAPFDAWLLLRGLKTL---------AVRMDRHCD 266 (386)
T ss_pred CCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHH-HhCCCCCHHHHHHHHcCCCcH---------HHHHHHHHH
Confidence 4489999999999764 58999998877665332111 123346777666666655543 567788899
Q ss_pred HHHHHHHHHHhC-CCeecC-----------CCCCCeEEEEeCC-cchHHHHHHHHHHCCceEEeec------CCCc----
Q 040324 377 NSNFFRSKLQKM-GFEVLG-----------DNDSPVMPIMVYN-PAKVSSFSRECLKQNVAIVTVG------FPAT---- 433 (488)
Q Consensus 377 ~~~~l~~~L~~~-g~~~~~-----------~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~------~~~~---- 433 (488)
++.++.+.|++. ++..+. ...+.++.+.+.. .....+|.+.|...++.++-.+ +|..
T Consensus 267 ~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~ 346 (386)
T PRK06767 267 NAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHA 346 (386)
T ss_pred HHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccc
Confidence 999999999987 444221 1234567776642 2345678888876665544211 1211
Q ss_pred ----------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 434 ----------PLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 434 ----------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
...++.+||++.+ ||.+.+++-|+++++
T Consensus 347 ~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~ 384 (386)
T PRK06767 347 AIPAELRQEMGIYDNLIRLSVGL----ESWEDIVSDLEQALK 384 (386)
T ss_pred cCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHh
Confidence 0124689999854 455666666666654
No 259
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.88 E-value=1.9e-20 Score=189.83 Aligned_cols=288 Identities=14% Similarity=0.113 Sum_probs=189.4
Q ss_pred hhhHHHHHHHHHHHhCC-------CCeE--EeCCcHHH-Hhhhhhcc--cCCCcEEEEeCCCchHHHHHHHhcCCeEEEe
Q 040324 145 LALHNELEECVARFVGK-------PAAI--VFGMGYVT-NSSILPVL--MGKGSLIISDSLNHNSIVNGARGSGATIRVF 212 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~-------~~~i--~~~sGs~a-~~~~~~~~--~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~ 212 (488)
.....+|++.+++++.. ++.+ ++|+|+.. ...++..+ +.+||.|++++|+|+.+...++..|++++.+
T Consensus 68 ~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v 147 (396)
T PRK09257 68 IEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTY 147 (396)
T ss_pred CCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEE
Confidence 33447899999998632 2333 77777664 45555444 4899999999999999999999999999988
Q ss_pred eC---C----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEcccccc
Q 040324 213 QH---N----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIG 282 (488)
Q Consensus 213 ~~---~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g 282 (488)
+. + |++++++.+.+. +.++.++++...++++|...+ +++|+++|++||+++|+||+|.
T Consensus 148 ~~~~~~~~~~d~~~l~~~~~~~----------~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-- 215 (396)
T PRK09257 148 PYYDAATKGLDFDAMLADLSQA----------PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQ-- 215 (396)
T ss_pred eccccccCccCHHHHHHHHHhC----------CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc--
Confidence 74 1 678888777642 113567777889999998775 8899999999999999999998
Q ss_pred ccCCC-CCCcchhcCCC-CCCccEEEcccccccCCcc---cEEEe---CHHH----HHHHHhhCCCCcccCCCCHHHHHH
Q 040324 283 AVGKT-GRGVCELLGVD-TSDVDIMMGTFSKSFGSYG---GYIAG---SKEL----IQYLKYNCPAHLYATSISPPAAEQ 350 (488)
Q Consensus 283 ~~g~~-g~~~~~~~~v~-p~~~di~~~t~sK~~g~~G---g~i~~---~~~~----~~~~~~~~~~~~~~~~~~p~~~aa 350 (488)
.+... +........+. ..+..|+++||||.++.+| ||++. +++. +..+...... .+. +.++..+.+
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~q~~ 293 (396)
T PRK09257 216 GFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRT-NYS-NPPAHGAAI 293 (396)
T ss_pred ccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhh-hcC-CCcHHHHHH
Confidence 55432 11111111111 1233688999999999877 99872 4443 3333222211 121 134444444
Q ss_pred HHHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHHhCC----CeecCCCCCCeEEEEeCCcchHHHHHHHHHH-CCce
Q 040324 351 IISAIQVVI-GEDGSCRGAQKLARIRENSNFFRSKLQKMG----FEVLGDNDSPVMPIMVYNPAKVSSFSRECLK-QNVA 424 (488)
Q Consensus 351 ~~a~L~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~ 424 (488)
+.+.|+.-. .....++.++.+++++++.+.+.+.|++.+ +.+..+.++.++|+.+. .+++..+++ +||.
T Consensus 294 ~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~-----~~~~~~l~~~~~V~ 368 (396)
T PRK09257 294 VATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT-----PEQVDRLREEFGVY 368 (396)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCC-----HHHHHHHHHcCCEE
Confidence 333332100 000012455678888999999999999875 44555666666666442 235555654 4998
Q ss_pred EEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 425 IVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 425 v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
+.+ .+ ||+++ ..++++|++++++|+++
T Consensus 369 ~~p---------~~--ri~~~-~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 369 AVG---------SG--RINVA-GLNESNIDYVAEAIAAV 395 (396)
T ss_pred EcC---------CC--eEEEe-eCCHHHHHHHHHHHHhh
Confidence 873 12 88884 38999999999999875
No 260
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=5.9e-20 Score=172.34 Aligned_cols=335 Identities=16% Similarity=0.144 Sum_probs=228.4
Q ss_pred cceeEEeccccccCCC--CCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC--------CCeEEeC
Q 040324 99 VSRCLNLGSYNYLGFA--AADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK--------PAAIVFG 168 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~--~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--------~~~i~~~ 168 (488)
+|.+|-++.+++.-++ ...+...+|+.++++.. ... .|+.+......++++|+++.. +++++++
T Consensus 60 ~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sg-k~N-----~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~lts 133 (447)
T KOG0259|consen 60 KKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSG-KGN-----GYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTS 133 (447)
T ss_pred CceeccCCCCCCCccccccCCHHHHHHHHHHHhcC-CCC-----CcCCccccHHHHHHHHHHhhcCCCCccCcCceEEec
Confidence 4577777655443222 12467788888888762 222 123444557889999999654 3667777
Q ss_pred CcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 169 MGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 169 sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
..++|...++.++..|+..|+++.|.|+-+..-+..++..++.++.- |++.+|.++++ ++.
T Consensus 134 GC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DE------------NT~ 201 (447)
T KOG0259|consen 134 GCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADE------------NTV 201 (447)
T ss_pred cchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhcc------------Cee
Confidence 77888899999999999999999999999998899999999988742 89999998876 256
Q ss_pred EEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCCCCC-CcchhcCCCCCCccEEEcccccccCCcc
Q 040324 242 IMVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGKTGR-GVCELLGVDTSDVDIMMGTFSKSFGSYG 317 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~-~~~~~~~v~p~~~di~~~t~sK~~g~~G 317 (488)
++||+.|- ++.|.+- -|++|+++|+|+|+++|.||+|....||..-- ....+..+.| .+.++++||.+=.+|
T Consensus 202 AivviNP~-NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVP---VitlggisKrW~VPG 277 (447)
T KOG0259|consen 202 AIVVINPN-NPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVP---VITLGGISKRWIVPG 277 (447)
T ss_pred EEEEeCCC-CCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCc---eEeecccccccccCC
Confidence 66665333 3333322 49999999999999999999998666663211 1223333445 678899999997788
Q ss_pred ---cEEEeCH--------HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHH
Q 040324 318 ---GYIAGSK--------ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ 386 (488)
Q Consensus 318 ---g~i~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 386 (488)
||++... .+++.+.....- ..+++...++|+-. |.+.--.+.....+.-++.+.+...++|+
T Consensus 278 WRlGWi~~hD~~gvf~~~~~~q~~~~~~~~----~~~p~TiiQ~AlP~---IL~kTp~efF~k~~~~lk~na~l~y~~Lk 350 (447)
T KOG0259|consen 278 WRLGWIALHDPRGVFRDTKVVQGIKNFLDI----IPGPATIIQGALPD---ILEKTPEEFFDKKLSFLKSNADLCYSRLK 350 (447)
T ss_pred ceeeeEEEecccccccchHHHHHHHHHHhc----cCCccHhHHHHhHH---HHHhChHHHHHHHHHHHHhhHHHHHHHHh
Confidence 9987542 334455443321 11333333333322 21111222456777788899999999999
Q ss_pred hC-CCe-ecCCCCCCeEEEEeC-----CcchHHHHHHHHHHC-CceEEeecCCCcc-CCCCeEEEeecCCCCHHHHHHHH
Q 040324 387 KM-GFE-VLGDNDSPVMPIMVY-----NPAKVSSFSRECLKQ-NVAIVTVGFPATP-LLLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 387 ~~-g~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~-~~~~~iRi~~~~~~t~edid~~l 457 (488)
++ ++. ...+.+..++++.+. +-.+..+|+++|.++ .+.+.| +.. ...|++|+++ ....+.+++++
T Consensus 351 ~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LP----G~af~~~nw~Ri~i--~~~~~~leea~ 424 (447)
T KOG0259|consen 351 DIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLP----GQAFGLKNWLRIVI--TVEEEMLEEAF 424 (447)
T ss_pred cCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEec----cccccCCCeEEEEE--ccChHHHHHHH
Confidence 88 555 344554444444332 334556899999766 988886 111 1248999988 78899999999
Q ss_pred HHHHHHHHHhC
Q 040324 458 EVISRIGDLVG 468 (488)
Q Consensus 458 ~~l~~~~~~~~ 468 (488)
++|+++.++..
T Consensus 425 ~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 425 SRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHhhh
Confidence 99999998875
No 261
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=6.1e-21 Score=173.19 Aligned_cols=333 Identities=19% Similarity=0.186 Sum_probs=229.5
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
-.+.+||-|- -+..+ .+.+.+++.+-..+- -.+|..+-..+||++.|+++|+|..+|++||+..|..++
T Consensus 20 ~~~~vDLRSD---TvT~P----TdeMr~am~eA~vgD----dVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaI 88 (384)
T KOG1368|consen 20 THRSVDLRSD---TVTVP----TDEMRRAMAEASVGD----DVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAI 88 (384)
T ss_pred eeeccccccc---cccCC----hHHHHHHHhhcccCc----ccccCCccHHHHHHHHHHHhCccceeeecccccccHHHH
Confidence 3456777531 22222 345555554433322 345777778999999999999999999999999998877
Q ss_pred hccc-CCCcEEEEeCCCchHHHHH---HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc
Q 040324 179 PVLM-GKGSLIISDSLNHNSIVNG---ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI 249 (488)
Q Consensus 179 ~~~~-~~~~~Vl~~~~~h~~~~~~---~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v 249 (488)
+..+ +++..|++...+|--.+.. ..+.|+.+.+++.. |++++|+.++... | .+|.|.++ +|..|..
T Consensus 89 m~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~--G--D~H~p~T~-LIclENT 163 (384)
T KOG1368|consen 89 MVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPK--G--DCHMPPTK-LICLENT 163 (384)
T ss_pred HHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCC--C--CccCCCce-EEEeecc
Confidence 7766 5999999999988655443 44567788777633 7899998887421 1 23555444 6667777
Q ss_pred CCCCC-CCCC---hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc-ccEEEeCH
Q 040324 250 YSMEG-ELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-GGYIAGSK 324 (488)
Q Consensus 250 ~s~~G-~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-Gg~i~~~~ 324 (488)
....| ...| +.++.+||+++|+-|++|.+.-+.+--..|-++-++.. ..|-+..++||++|.| |+++++++
T Consensus 164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~----~fDSVsiCLSKglgAPVGSViVG~k 239 (384)
T KOG1368|consen 164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICS----AFDSVSICLSKGLGAPVGSVIVGSK 239 (384)
T ss_pred ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHH----hhhhhhhhhhccCCCCcccEEEccH
Confidence 76654 6666 66788899999999999999754333233333323221 1244555899999975 69999999
Q ss_pred HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCC-CCCCeEE
Q 040324 325 ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGD-NDSPVMP 402 (488)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~~ 402 (488)
++++..+........+...+.+.+++++-+|+.- -..+++-.++++.+.+.++..+ +++..+ ..+.++.
T Consensus 240 ~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~---------~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~ 310 (384)
T KOG1368|consen 240 DFIDKARHFRKALGGGMRQSGVLAAAALVALDEN---------VPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVN 310 (384)
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcc---------hHHHHHHHHHHHHHHHHhccccceeeecchhhcceee
Confidence 9998765544332333334567778888887752 2255666777777888887775 666444 4567766
Q ss_pred EEeCCc-chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH-HHHHh
Q 040324 403 IMVYNP-AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR-IGDLV 467 (488)
Q Consensus 403 ~~~~~~-~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~-~~~~~ 467 (488)
+.+..+ ....++++.+.+.||.+.. ....++|+.++..+|+++++.++..+.+ ++...
T Consensus 311 ~~l~q~~~~~~~l~~~~~k~gi~lm~-------~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 311 MVLCQARLTAEELCKFLEKNGILLMG-------GASRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQL 370 (384)
T ss_pred eecccccCCHHHHHHHHHHCCeEEee-------ccccceEEEEEEecCHHHHHHHHHHHHHHHHhhc
Confidence 555433 4667899999999999984 1235799999999999999999999954 44443
No 262
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=7.6e-20 Score=184.16 Aligned_cols=211 Identities=16% Similarity=0.199 Sum_probs=169.0
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~ 219 (488)
..+...+||+++|++.|.+.++++++|++|+..++.++.++||.|+++.+.|+++... +...|.++..++..|+++
T Consensus 62 ~~p~~~~le~~lA~l~g~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~ 141 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGAEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQ 141 (398)
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHH
Confidence 3466799999999999999999999999998888888899999999999999976433 445688888888888999
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++|+.+... +. + .
T Consensus 142 l~~~i~~-------------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~---~~------l-~ 198 (398)
T PRK08249 142 IEAEIAK-------------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQ---NP------L-A 198 (398)
T ss_pred HHHhcCC-------------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccC---Cc------h-h
Confidence 8888754 3346777888899999999999999999999999999999843222 10 1 1
Q ss_pred CCccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
.+.|+++.|++|.+|+. ||++++++++++.++..... .+...+|..++.++..|+.+ ..+.++..
T Consensus 199 ~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~--~g~~~s~~~a~l~l~~l~tL---------~~R~~~~~ 267 (398)
T PRK08249 199 LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREI--NGATMDPMSAYLILRGMKTL---------KLRVRQQQ 267 (398)
T ss_pred hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhCcchH---------HHHHHHHH
Confidence 34589999999999863 48888999988887755442 34458888888888887765 45677888
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
++...+.+.|++.
T Consensus 268 ~na~~la~~L~~~ 280 (398)
T PRK08249 268 ESAMALAKYLQTH 280 (398)
T ss_pred HHHHHHHHHHHcC
Confidence 8999999999875
No 263
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.88 E-value=2.4e-20 Score=186.26 Aligned_cols=283 Identities=13% Similarity=0.144 Sum_probs=199.9
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
++....||+++|++.|.+.+++++||++|+..++.++.++||.|++..+.|+.+... ....|.++..++.++.+++
T Consensus 49 nPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l 128 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDI 128 (377)
T ss_pred CccHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 356689999999999999999999999999888888899999999988888776532 3445777777766555666
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ ++.+|+++.+.++.|.+.++++|+++|+++|+++|+|++|+.|.+.+ .+ ..
T Consensus 129 ~~~i~~-------------~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~---------pl-~~ 185 (377)
T TIGR01324 129 ATLIQP-------------NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK---------PL-EH 185 (377)
T ss_pred HHhcCC-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---------cc-cc
Confidence 666543 34477788999999999999999999999999999999998655532 11 13
Q ss_pred CccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
++|+++.|++|.+|+. ||+++++++..+.++... ..++...+|..+...+..++.+ ..++++..+
T Consensus 186 gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~--~~~G~~l~p~~a~~~~rgl~tl---------~~R~~~~~~ 254 (377)
T TIGR01324 186 GVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHS--YLMGQMVDADDAYTTLRGLRTL---------GVRLKQHQE 254 (377)
T ss_pred CceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHH--HHhCCCCCHHHHHHHHhhhhhH---------HHHHHHHHH
Confidence 5689999999999753 488999988877776432 2456668888777777777765 456788888
Q ss_pred HHHHHHHHHHhCC-C-eecC----------------CCCCCeEEEEeCC--cchHHHHHHHHHHCCceEEeecC------
Q 040324 377 NSNFFRSKLQKMG-F-EVLG----------------DNDSPVMPIMVYN--PAKVSSFSRECLKQNVAIVTVGF------ 430 (488)
Q Consensus 377 ~~~~l~~~L~~~g-~-~~~~----------------~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~------ 430 (488)
++..+.+.|++.. + .+.- ...+.++.+.+.. .....+|.+.|.--++.+.-.+.
T Consensus 255 ~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~ 334 (377)
T TIGR01324 255 SSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALC 334 (377)
T ss_pred HHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeec
Confidence 8888888887651 1 1110 1234677777753 23455677766543443221110
Q ss_pred CC--c--------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 431 PA--T--------PLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 431 ~~--~--------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+. . ....+.+||++.+. |.|.+++-|+++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~liR~svGlE----~~~dl~~dl~~al~ 375 (377)
T TIGR01324 335 NQPELGHRPNIKRNLEGPLIRVHIGLE----NVDDLKADLKAGFE 375 (377)
T ss_pred CCCCCCHHHHHhccCCCCEEEEEeCCC----CHHHHHHHHHHHHh
Confidence 00 0 01225799998544 55556666666554
No 264
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.88 E-value=3.5e-20 Score=189.24 Aligned_cols=292 Identities=13% Similarity=0.105 Sum_probs=189.7
Q ss_pred hHHHHHHHHHHHh----CC---CCeEEeCCcHHHH-hhhhhcccC-----CCcEEEE-eCCCchHHHHHHHhcC------
Q 040324 147 LHNELEECVARFV----GK---PAAIVFGMGYVTN-SSILPVLMG-----KGSLIIS-DSLNHNSIVNGARGSG------ 206 (488)
Q Consensus 147 ~~~~l~~~la~~~----g~---~~~i~~~sGs~a~-~~~~~~~~~-----~~~~Vl~-~~~~h~~~~~~~~~~g------ 206 (488)
...+|++.+|+++ |. ++.|++++|+... ..++.++++ +++.|++ ..|+|+.+...+...+
T Consensus 75 G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~ 154 (416)
T PRK09440 75 GKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYR 154 (416)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecc
Confidence 3478888888887 32 3567788887755 556666663 6889999 7999998876544322
Q ss_pred CeEEEeeC------CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEc
Q 040324 207 ATIRVFQH------NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 207 ~~v~~~~~------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE 277 (488)
..+..++. -|+++|+ +. +..+ ++++....+++|.+.+ +++|+++|++|++++|+||
T Consensus 155 ~~~~~~~~~~~~~~~d~~~l~--~~------------~~~~-~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De 219 (416)
T PRK09440 155 PNIELLPEGQFKYHVDFEHLH--ID------------EDTG-AICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDN 219 (416)
T ss_pred cccccccccccccCCCHHHcc--cC------------CCce-EEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeC
Confidence 12222221 1445554 11 1134 4444456789998886 7888999999999999999
Q ss_pred cccccccCCCCCCcchhcCCCC--CCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHH
Q 040324 278 AHSIGAVGKTGRGVCELLGVDT--SDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQII 352 (488)
Q Consensus 278 ~~s~g~~g~~g~~~~~~~~v~p--~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~ 352 (488)
+|. .+-+... +.+..+ .+..|+++||||. +.+| ||+++++++++.+......... +.+.+.+.++.
T Consensus 220 ~Y~--~~~~~~~----~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~l~~~~~~~~~~~~~--~~s~~~q~~~~ 290 (416)
T PRK09440 220 AYG--PPFPGII----FSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEEIIEALSNMNGIISL--APGRLGPAIAA 290 (416)
T ss_pred Ccc--ccCCCcc----hhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHHHHHHHHHHHHHhcc--CCCcHHHHHHH
Confidence 996 2211100 111111 2346888999996 7778 9999999999988765543222 25566666655
Q ss_pred HHHHHHhccCCCchHHH-HHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCC-cchHHHHHHHHHHCCceEE
Q 040324 353 SAIQVVIGEDGSCRGAQ-KLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYN-PAKVSSFSRECLKQNVAIV 426 (488)
Q Consensus 353 a~L~~i~~~~~~~~~~~-~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~ 426 (488)
+.|+. .....+..+ ++..++++.+.+++.|++. ++.+..+.++.++|+.+.. .....++.+.|.++||.+.
T Consensus 291 ~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~ 367 (416)
T PRK09440 291 EMIES---GDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLVV 367 (416)
T ss_pred HHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCCCHHHHHHHHHHCCEEEe
Confidence 55532 101111122 4555667777777777653 4555666678888888765 3456789999988999999
Q ss_pred eec-C-CCcc----CCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 427 TVG-F-PATP----LLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 427 ~~~-~-~~~~----~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.. | +... .+.+++||+++ .+++++++++++|.+++++.
T Consensus 368 pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 368 PGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred chHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 732 2 1111 01358999985 47999999999999998764
No 265
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.88 E-value=2e-20 Score=191.88 Aligned_cols=296 Identities=17% Similarity=0.103 Sum_probs=188.5
Q ss_pred HHHHHHHHHHh------CC-----CCeEEeCCcHHHH-hhhhhc-----ccCCCcEEEEeCCCchHHHHHHHhcCC--eE
Q 040324 149 NELEECVARFV------GK-----PAAIVFGMGYVTN-SSILPV-----LMGKGSLIISDSLNHNSIVNGARGSGA--TI 209 (488)
Q Consensus 149 ~~l~~~la~~~------g~-----~~~i~~~sGs~a~-~~~~~~-----~~~~~~~Vl~~~~~h~~~~~~~~~~g~--~v 209 (488)
.++++++++.+ +. +..+++++|+... ..++.+ ++++||.|+++.|+|+.+...+++.+. .+
T Consensus 137 ~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~ 216 (527)
T PRK09275 137 LKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEV 216 (527)
T ss_pred HHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEE
Confidence 57777777622 11 2267777776654 444443 689999999999999999988887754 44
Q ss_pred EEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHH--cCcEEEEEc
Q 040324 210 RVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKR--YKAYTYLDE 277 (488)
Q Consensus 210 ~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~--~g~~li~DE 277 (488)
+.++.+ |.+++++++.. ..++++++ ...+++|.+.+ +++|+++|++ ++++||+||
T Consensus 217 v~v~~~~~~~f~~d~~~l~~~~~~------------~tkai~l~-nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DE 283 (527)
T PRK09275 217 VHINADEENEWQYPDSELEKLRDP------------SIKALFLV-NPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDD 283 (527)
T ss_pred EEeecCcccCCCCCHHHHHhhcCC------------CCCEEEEe-CCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECC
Confidence 455421 55667665432 35666666 55788888776 8889999965 599999999
Q ss_pred cccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc---cEEEeCHH-----HHHHH-------------------
Q 040324 278 AHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKE-----LIQYL------------------- 330 (488)
Q Consensus 278 ~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G---g~i~~~~~-----~~~~~------------------- 330 (488)
+|. .|....... ....| +..|++.||||.+|.+| ||++++++ +++.+
T Consensus 284 vY~--~f~~~~~s~---~~~~~-~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p 357 (527)
T PRK09275 284 VYG--TFVDDFRSL---FAVLP-YNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDP 357 (527)
T ss_pred CCh--hhcccccCH---HHhCC-CCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCc
Confidence 998 454221111 12222 35688999999999988 99999875 33222
Q ss_pred -------------HhhCCCCcccCCCCHHHHHH-HHHHHH-HHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 331 -------------KYNCPAHLYATSISPPAAEQ-IISAIQ-VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 331 -------------~~~~~~~~~~~~~~p~~~aa-~~a~L~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
+.....++. +.+.+.+.+ ++.++. .+.. ..+..++.++.++++.+.+.+.|. .++....+
T Consensus 358 ~~~~fidrlvad~~~v~~~~t~--~~s~p~Q~a~al~~~~all~~--~~~~~~~~~~~~~~Rr~~l~~~Lg-~~~~~~~p 432 (527)
T PRK09275 358 EKLKFIDRLVADSRQVALNHTA--GLSTPQQVQMALFSLFALLDE--EDAYKKAMKDIIRRRYKALYEGLG-LPEPEDPN 432 (527)
T ss_pred chhhhHHHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHhC--chHHHHHHHHHHHHHHHHHHHHcC-CCCcCCCC
Confidence 122221222 244443333 322221 1211 122456677788888888877762 22222344
Q ss_pred CCCCeEEEEeCCc----------------chHHHHHHHHHHC-CceEEee-cCCCccCCCCeEEEeecCCCCHHHHHHHH
Q 040324 396 NDSPVMPIMVYNP----------------AKVSSFSRECLKQ-NVAIVTV-GFPATPLLLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 396 ~~~~~~~~~~~~~----------------~~~~~~~~~l~~~-Gi~v~~~-~~~~~~~~~~~iRi~~~~~~t~edid~~l 457 (488)
.++.++++.+... ....+|+.+|+++ ||.+.|. +| .+ .++++|+|+ ...+++++.++.
T Consensus 433 ~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~F--g~-~~~~vRis~-a~~~~~~~~~~~ 508 (527)
T PRK09275 433 NAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGF--GG-PEWSVRVSL-ANLNEEDYAKIG 508 (527)
T ss_pred CeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhh--CC-CCCeEEEEE-ecCCHHHHHHHH
Confidence 5555555554321 1355788889887 9999972 23 21 246899998 346899999999
Q ss_pred HHHHHHHHHhCCccC
Q 040324 458 EVISRIGDLVGIKYF 472 (488)
Q Consensus 458 ~~l~~~~~~~~~~~~ 472 (488)
++|.++++++..++.
T Consensus 509 ~rl~~~l~~y~~~~~ 523 (527)
T PRK09275 509 KAIRKLLDEYYEEYK 523 (527)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988866553
No 266
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.88 E-value=9.3e-21 Score=189.32 Aligned_cols=310 Identities=16% Similarity=0.205 Sum_probs=202.7
Q ss_pred CCCCCccchHHHHHHHHHcCCCCCCcc-cCCC--ChhhHHHHHHHHHHHhCCC-CeEEeCCc-HHHHhhhhhccc----C
Q 040324 113 FAAADEYCTPRVIDSLKKYSHSTCSSR-VDGG--TLALHNELEECVARFVGKP-AAIVFGMG-YVTNSSILPVLM----G 183 (488)
Q Consensus 113 ~~~~~~~v~~a~~~~l~~~~~~~~~~~-~~~g--~~~~~~~l~~~la~~~g~~-~~i~~~sG-s~a~~~~~~~~~----~ 183 (488)
.+..++.+.+++.+.+..... ..+++ ...+ ..+..+++++.++++++.+ +.+++++| ++++..++..+. .
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~ 85 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFG-NPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQ 85 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCC-CCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccc
Confidence 333467888888888755321 11111 1111 2245689999999999975 44555555 567766666554 3
Q ss_pred CC-cEEEEeCCCchHHHHHH---HhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 184 KG-SLIISDSLNHNSIVNGA---RGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 184 ~~-~~Vl~~~~~h~~~~~~~---~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
++ +.|++....|+++.... +..|.+++.++.+ |++++++.+++ ++.+|++..+.+++|
T Consensus 86 ~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-------------~~~lv~~~~~~n~tG 152 (353)
T TIGR03235 86 KGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRP-------------DTLLVSIMHVNNETG 152 (353)
T ss_pred CCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCC-------------CCEEEEEEcccCCce
Confidence 44 78999999999876653 3458888887743 77888777643 345677778999999
Q ss_pred CCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHH--H
Q 040324 255 ELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYL--K 331 (488)
Q Consensus 255 ~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~--~ 331 (488)
.+.|+++|.++|+++|+++++|++|+.|... ++++..++|+++.|.+|.+|..| |+++.+++..+.. .
T Consensus 153 ~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~---------~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~ 223 (353)
T TIGR03235 153 SIQPIREIAEVLEAHEAFFHVDAAQVVGKIT---------VDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLK 223 (353)
T ss_pred eccCHHHHHHHHHHcCCEEEEEchhhcCCcc---------ccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccC
Confidence 9999999999999999999999999866542 23433467999999999988766 8888887643221 1
Q ss_pred hhCC--C---CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC---CeEEE
Q 040324 332 YNCP--A---HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS---PVMPI 403 (488)
Q Consensus 332 ~~~~--~---~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---~~~~~ 403 (488)
.... . .....+.++...++..++++.+.. ..++..++++++.++++++|++.|+++..+... .++.+
T Consensus 224 ~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~-----~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~ 298 (353)
T TIGR03235 224 PIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARR-----NAQAWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNF 298 (353)
T ss_pred ceeeCCCCcCccccCCCChHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEE
Confidence 1000 0 011223566677777788887631 456788899999999999999899887654322 23444
Q ss_pred EeCCcchHHHHHHHHHHCCceEEeec-CCCccCCCCeEEEeecCCCCHHHHH
Q 040324 404 MVYNPAKVSSFSRECLKQNVAIVTVG-FPATPLLLARARICISASHTKEDLI 454 (488)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~~~~~iRi~~~~~~t~edid 454 (488)
.+ ......++.+.|. +||.+.+.. +.....+...+|.++ ..+++++.
T Consensus 299 ~~-~~~~~~~v~~~L~-~~i~v~~g~~~~~~~~~~~~~l~~~--g~~~~~~~ 346 (353)
T TIGR03235 299 SI-DGVNSEALIVNLR-ADAAVSTGSACSSSKYEPSHVLQAM--GLDTDRAR 346 (353)
T ss_pred Ee-CCcCHHHHHHHHh-CCeEEEchhhcCCCCCCCCHHHHHc--CCCHHHhC
Confidence 33 2334567777785 488888622 111112223455544 44555443
No 267
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.88 E-value=7.2e-20 Score=173.27 Aligned_cols=300 Identities=16% Similarity=0.167 Sum_probs=215.0
Q ss_pred HHHHHHHHHHhCC----------CCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHh-cCCeEEEeeCC--
Q 040324 149 NELEECVARFVGK----------PAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARG-SGATIRVFQHN-- 215 (488)
Q Consensus 149 ~~l~~~la~~~g~----------~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~-~g~~v~~~~~~-- 215 (488)
.++++++|+++.. ++.++++.++.||.+++.+++.||+..+++.|+|+.+...++. +|.+++++...
T Consensus 124 ~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss 203 (471)
T KOG0256|consen 124 PSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSS 203 (471)
T ss_pred hHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecC
Confidence 6889999998843 3577777777888999999999999999999999999877665 47777776532
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 216 -----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 216 -----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
+.++||+++.++...+. +.+.++|+ ...++-|++.+ |..+..++.++++.+|+||+|+...|+..
T Consensus 204 ~~f~itv~alE~A~~~A~~~~~------kVkGvlit-NPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~ 276 (471)
T KOG0256|consen 204 NGFQITVEALEAALNQARKLGL------KVKGVLIT-NPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKS 276 (471)
T ss_pred CCccccHHHHHHHHHHHHHhCC------ceeEEEEe-CCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCcc
Confidence 68999999999877653 23444444 44455565553 88899999999999999999987788765
Q ss_pred CC-CcchhcC---CCCCCccEEEcccccccCCcc---cEEEe-CHHHHHHHHhhCCCCcccCCCCHHH---HHHHHHHHH
Q 040324 288 GR-GVCELLG---VDTSDVDIMMGTFSKSFGSYG---GYIAG-SKELIQYLKYNCPAHLYATSISPPA---AEQIISAIQ 356 (488)
Q Consensus 288 g~-~~~~~~~---v~p~~~di~~~t~sK~~g~~G---g~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~---~aa~~a~L~ 356 (488)
+- .+.++.. .+++. .-++.|+||-||.+| |+|.+ ++.++...++.+. |+ ..++.. +++.+.- +
T Consensus 277 ~F~Sv~ev~~~~~~~~~r-vHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmss---f~-~vSs~tQ~~la~LLSD-~ 350 (471)
T KOG0256|consen 277 EFRSVLEVRKDPHLDPDR-VHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSS---FG-LVSSQTQYLLASLLSD-E 350 (471)
T ss_pred CceEHHHHhhccccCCCc-EEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhh---cc-CCcHHHHHHHHHHhch-H
Confidence 32 2344322 23333 355679999999999 88876 4677777776654 22 123322 2222222 2
Q ss_pred HHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC------cchHHHHHHHHHHC-CceEEeec
Q 040324 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN------PAKVSSFSRECLKQ-NVAIVTVG 429 (488)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~-Gi~v~~~~ 429 (488)
.+ .....++...|++.+.+++.++|+++|++......+.++|+.+.. .....++.++++++ ++.++|..
T Consensus 351 ~f----~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~ 426 (471)
T KOG0256|consen 351 EF----TREYLRENNKRLRIRHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGS 426 (471)
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCC
Confidence 22 122456778889999999999999999999888778888887632 12334788889988 99999722
Q ss_pred CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 430 FPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 430 ~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.+.-...+++|+|+ +...++.++-++++|...++..
T Consensus 427 -s~~C~EpGWFRvcF-An~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 427 -SCHCHEPGWFRVCF-ANMSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred -cceecCCCeEEEEe-ccCCHHHHHHHHHHHHHHHHhh
Confidence 22223457999999 4566777777999999998743
No 268
>PRK08637 hypothetical protein; Provisional
Probab=99.88 E-value=2.2e-19 Score=181.50 Aligned_cols=322 Identities=14% Similarity=0.112 Sum_probs=209.2
Q ss_pred ccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-------C--CeEEeCCcHHH-HhhhhhcccCCCcE
Q 040324 118 EYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-------P--AAIVFGMGYVT-NSSILPVLMGKGSL 187 (488)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-------~--~~i~~~sGs~a-~~~~~~~~~~~~~~ 187 (488)
|.+.+++.+.+++..... ...++......+|++.+++++.. + +.+++++|+.. ...++.+++++||.
T Consensus 19 ~~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~ 95 (388)
T PRK08637 19 PMYLSSLQDLLNDLTPDE---IFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDT 95 (388)
T ss_pred cchHHHHHHHHHhhcccc---ccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCE
Confidence 567778887777632111 11122333347888888876521 1 34677777665 46777888899999
Q ss_pred EEEeCCCchHHHHHHH-hcCCeEEEeeC--C----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC--
Q 040324 188 IISDSLNHNSIVNGAR-GSGATIRVFQH--N----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK-- 258 (488)
Q Consensus 188 Vl~~~~~h~~~~~~~~-~~g~~v~~~~~--~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~-- 258 (488)
|+++.|+|+.+...+. ..|++++.++. + |++++++.++... ...+.++++...++++|....
T Consensus 96 Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~---------~~~~~~~~~~~P~NPTG~~~s~~ 166 (388)
T PRK08637 96 VLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAY---------NKGKVIVILNFPNNPTGYTPTEK 166 (388)
T ss_pred EEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhc---------cCCCEEEEEeCCCCCCCCCCCHH
Confidence 9999999999987654 57899988775 2 6788888776210 014556667777999997775
Q ss_pred -hHHHHHHHHH-----cCcEEEEEccccccccCCCCCCcc----hhcCCCCCCc-cEEEcccccccCCcc---cEEEe--
Q 040324 259 -LPEIITICKR-----YKAYTYLDEAHSIGAVGKTGRGVC----ELLGVDTSDV-DIMMGTFSKSFGSYG---GYIAG-- 322 (488)
Q Consensus 259 -l~~l~~l~~~-----~g~~li~DE~~s~g~~g~~g~~~~----~~~~v~p~~~-di~~~t~sK~~g~~G---g~i~~-- 322 (488)
+++|+++|++ |+++||+||+|. .+-..+.... ...+.. +.+ .+.++|+||.++.+| ||++.
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~iI~De~Y~--~l~~~~~~~~~~~~~~~~~~-~~vi~i~~~s~SK~~~~pGlRlG~~~~~~ 243 (388)
T PRK08637 167 EATAIVEAIKELADAGTKVVAVVDDAYF--GLFYEDSYKESLFAALANLH-SNILAVKLDGATKEEFVWGFRVGFITFGT 243 (388)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEecccch--hcccCCccchhhHHHhhccc-ccceEEEeccccccCCCcccceEEEEEcc
Confidence 7777777765 999999999998 4433332211 111221 122 233469999999888 99974
Q ss_pred ----CHHHHHHHHhhC---CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC----CCe
Q 040324 323 ----SKELIQYLKYNC---PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM----GFE 391 (488)
Q Consensus 323 ----~~~~~~~~~~~~---~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~ 391 (488)
++++++.+.... ..... .+.|.+.++++.+.|+. .....+..+.+..++++.+.+.+.|++. ++.
T Consensus 244 ~~~~~~~l~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~ 319 (388)
T PRK08637 244 KAGSSQTVKEALEKKVKGLIRSNI-SNGPHPSQSAVLRALNS---PEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQ 319 (388)
T ss_pred ccCCcHHHHHHHHHHHHHHhhccc-CCCCcHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcc
Confidence 367777765321 00011 12556666666555531 1111123444556777777777777665 456
Q ss_pred ecCCCCCCeEEEEeCCcchHHHHHHHHHH-CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 392 VLGDNDSPVMPIMVYNPAKVSSFSRECLK-QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+..+.++.++++.+. .....+++++|++ +||.+... +.+++||+++. .+++++++++++|.++++.+
T Consensus 320 ~~~~~~g~~~~~~l~-~~~~~~l~~~l~~~~gv~~~~~-------~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 320 AYPFNSGYFMCLKLK-GVDAEELRVHLLEKYGIGTIAL-------NETDLRIAFSC-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred cccccceEEEEecCC-hHHHHHHHHHHhhhcceEEEec-------cCCceEEEeec-CCHHHHHHHHHHHHHHHHhc
Confidence 666666677777664 2346789999974 59988731 24689999954 78999999999999998765
No 269
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=5.1e-20 Score=184.96 Aligned_cols=210 Identities=17% Similarity=0.217 Sum_probs=165.1
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++.++++.|.+.+++++||++|+..++.++.++||.|+++.+.|+.+.. .+...|.++..++.+|++++
T Consensus 53 ~p~~~~le~~la~l~g~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l 132 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAW 132 (380)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHH
Confidence 45568999999999999999999999999988888888999999999988876543 34556888888888888888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ +..+|+++.+.++.|.+.++++|.++|+++|+++|+||+|+.+.+. . .+ ..
T Consensus 133 ~~~i~~-------------~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~---~------pl-~~ 189 (380)
T TIGR01325 133 EAAVKP-------------NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQ---Q------PL-KL 189 (380)
T ss_pred HHhcCC-------------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---C------ch-hh
Confidence 877643 3457777888999999999999999999999999999999733221 1 11 12
Q ss_pred CccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
+.|+++.|++|.+++. ||++++++++++.++..... ++..++|..++.++..++.+ ..+.++..+
T Consensus 190 g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~--~g~~~~p~~a~~~l~~l~tl---------~~r~~~~~~ 258 (380)
T TIGR01325 190 GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRH--TGPAMSPFNAWVLLKGLETL---------SLRMQKQFD 258 (380)
T ss_pred CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHh--hCCCCCHHHHHHHHhccCcH---------HHHHHHHHH
Confidence 3489999999999864 38899999888877654332 34457777777777766655 457778888
Q ss_pred HHHHHHHHHHhC
Q 040324 377 NSNFFRSKLQKM 388 (488)
Q Consensus 377 ~~~~l~~~L~~~ 388 (488)
++..+.+.|++.
T Consensus 259 ~a~~la~~L~~~ 270 (380)
T TIGR01325 259 SALAIAEWLQAQ 270 (380)
T ss_pred HHHHHHHHHHcC
Confidence 888888888876
No 270
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.87 E-value=3.2e-19 Score=179.87 Aligned_cols=310 Identities=18% Similarity=0.204 Sum_probs=210.6
Q ss_pred cchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-cCCCcEEEEeCCCchH
Q 040324 119 YCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHNS 197 (488)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-~~~~~~Vl~~~~~h~~ 197 (488)
+-.+++.+++.... + ...+...++|+.++++++.+.++++++|++|+..++.++ .++||.|+++.+.|.+
T Consensus 11 ~~~~~v~~~~~~~~--~-------~~g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~ 81 (380)
T TIGR03588 11 DDIDAVVEVLKSDF--L-------TQGPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVA 81 (380)
T ss_pred HHHHHHHHHHhcCC--c-------cCChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH
Confidence 34667777665521 1 123445899999999999988999999999998888887 7899999999999999
Q ss_pred HHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCc
Q 040324 198 IVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKA 271 (488)
Q Consensus 198 ~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~ 271 (488)
+...+...|++++.++.+ |++++++.+.+. .. +.+++++++. ..|...++++|.++|++||+
T Consensus 82 ~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~-----~~t~~v~~~~----~~G~~~~~~~i~~l~~~~~~ 149 (380)
T TIGR03588 82 TANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAA---KG-----KLPKAIVPVD----FAGKSVDMQAIAALAKKHGL 149 (380)
T ss_pred HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcc---cC-----CCceEEEEeC----CCCccCCHHHHHHHHHHcCC
Confidence 998889999999888752 788888888631 00 1245555442 35888899999999999999
Q ss_pred EEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccc--cccCC-cccEEEe-CHHHHHHHHhhCC-C----------
Q 040324 272 YTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFS--KSFGS-YGGYIAG-SKELIQYLKYNCP-A---------- 336 (488)
Q Consensus 272 ~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~s--K~~g~-~Gg~i~~-~~~~~~~~~~~~~-~---------- 336 (488)
+||+|++|++|.. ..+.. .|.. ..-|+.+.|++ |.++. .||+++. ++++.+.++.... +
T Consensus 150 ~lI~D~a~a~g~~-~~~~~----~g~~-~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 223 (380)
T TIGR03588 150 KIIEDASHALGAE-YGGKP----VGNC-RYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEK 223 (380)
T ss_pred EEEEECCCcccCc-cCCEe----CCCc-cccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCcccccc
Confidence 9999999997643 22221 1210 12278887876 88864 4566665 5777766653210 0
Q ss_pred ------------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCCC-C---C-
Q 040324 337 ------------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDN-D---S- 398 (488)
Q Consensus 337 ------------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~---~- 398 (488)
..+...++...++.+++.|+.+ ++..++-+++.+++.+.|.+++ +.+..+. . +
T Consensus 224 ~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l---------~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 294 (380)
T TIGR03588 224 QDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL---------DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAW 294 (380)
T ss_pred cccCcceeeeeccccccCccHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEE
Confidence 0111234556656666666644 5677778889999999998874 3322221 1 1
Q ss_pred CeEEEEeCC--cchHHHHHHHHHHCCceEEeecCCCc---------cC---------CCCeEEEeecCCCCHHHHHHHHH
Q 040324 399 PVMPIMVYN--PAKVSSFSRECLKQNVAIVTVGFPAT---------PL---------LLARARICISASHTKEDLIEALE 458 (488)
Q Consensus 399 ~~~~~~~~~--~~~~~~~~~~l~~~Gi~v~~~~~~~~---------~~---------~~~~iRi~~~~~~t~edid~~l~ 458 (488)
..+++.+.. .....++.+.|.++||.+.....|.. .. ....+++.++...|++|++++++
T Consensus 295 ~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~ 374 (380)
T TIGR03588 295 HLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVE 374 (380)
T ss_pred EEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHH
Confidence 233444432 13567899999999998874222211 00 11568888888899999999999
Q ss_pred HHHHHH
Q 040324 459 VISRIG 464 (488)
Q Consensus 459 ~l~~~~ 464 (488)
+|++++
T Consensus 375 ~l~~~~ 380 (380)
T TIGR03588 375 TLRKVL 380 (380)
T ss_pred HHHHhC
Confidence 998763
No 271
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.87 E-value=1.2e-19 Score=182.69 Aligned_cols=210 Identities=16% Similarity=0.174 Sum_probs=163.0
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+...++++.+|++.|.++++++++|++|+..++.++.++||.|+++.+.|+++... +...|.++..++.+|++++
T Consensus 60 ~p~~~~le~~la~l~g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 139 (390)
T PRK08133 60 NPTVTMFQERLAALEGAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAW 139 (390)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 456789999999999999999999999999888888889999999999999876543 4557899999998899999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++++.+.+.. . + ..
T Consensus 140 ~~~i~~-------------~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~---p------l-~~ 196 (390)
T PRK08133 140 RAAVRP-------------NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ---P------L-KL 196 (390)
T ss_pred HHhcCc-------------CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC---c------h-hh
Confidence 887753 34467778888999999999999999999999999999987433321 1 1 12
Q ss_pred CccEEEcccccccCCcc----cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSYG----GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~G----g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
+.|+++.|++|.+++.| |+++++++.++.+..... ..+...+|..+..++..++.+ ..+.++..+
T Consensus 197 g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~--~~g~~~~~~~a~~~l~gl~tl---------~~R~~~~~~ 265 (390)
T PRK08133 197 GADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLR--TAGPTLSPFNAWVFLKGLETL---------SLRMEAHSA 265 (390)
T ss_pred CCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHH--HhCCCCCHHHHHHHHcccchH---------HHHHHHHHH
Confidence 34899999999998643 888888887766653322 123346777666665555543 566777778
Q ss_pred HHHHHHHHHHhC
Q 040324 377 NSNFFRSKLQKM 388 (488)
Q Consensus 377 ~~~~l~~~L~~~ 388 (488)
+...+.+.|++.
T Consensus 266 ~a~~la~~L~~~ 277 (390)
T PRK08133 266 NALALAEWLEAH 277 (390)
T ss_pred HHHHHHHHHHhC
Confidence 888899988876
No 272
>PRK06460 hypothetical protein; Provisional
Probab=99.86 E-value=2.1e-19 Score=179.99 Aligned_cols=211 Identities=17% Similarity=0.206 Sum_probs=160.4
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCch----HHHHHHHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHN----SIVNGARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~----~~~~~~~~~g~~v~~~~~~d~~~ 219 (488)
..+...+|++++|++.|.+.++++++|++++..++.++.++||.|++..+.|+ .+...++..|.++..++.++.+.
T Consensus 43 ~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~ 122 (376)
T PRK06460 43 ANPTVLELTKKIVELENAEMGVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNI 122 (376)
T ss_pred CCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHH
Confidence 34667899999999999988999999999888888888999999999876553 33455677789988888776555
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+++ +..+|+++.+.++.|.+.++++|+++|+++|+++|+||+|+.+. ... ...
T Consensus 123 l~~~~~~-------------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~---~~~------~l~- 179 (376)
T PRK06460 123 IEKAKSK-------------RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPI---NQK------PLE- 179 (376)
T ss_pred HHHhcCC-------------CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccc---cCC------hhh-
Confidence 5443221 33467779999999999999999999999999999999997321 111 111
Q ss_pred CCccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
.+.|+++.|+||.+++. +|++++++++++.++..... ++.+.+|..+..++..++.+ +.+++++.
T Consensus 180 ~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~--~g~~~~~~~a~~~l~~~~~l---------~~r~~~~~ 248 (376)
T PRK06460 180 LGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRT--LGTSLDPHAAYLTLRGIKTL---------KIRMDVIN 248 (376)
T ss_pred cCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhchhhH---------HHHHHHHH
Confidence 23589999999999753 58999999999888765443 33346676555555555544 57788899
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
++++++.+.|++.
T Consensus 249 ~n~~~l~~~L~~~ 261 (376)
T PRK06460 249 RNAEQIAEFLEGH 261 (376)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999875
No 273
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.86 E-value=1.1e-18 Score=174.81 Aligned_cols=306 Identities=15% Similarity=0.160 Sum_probs=203.5
Q ss_pred ccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-cCCCcEEEEeCCCch
Q 040324 118 EYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHN 196 (488)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-~~~~~~Vl~~~~~h~ 196 (488)
++..+++.+.+... . ..|..+...++++.++++++.+.++++++|+++...++.++ .++||.|+++.++|.
T Consensus 11 ~~e~~a~~~~~~~~-~-------~~~~g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~ 82 (376)
T TIGR02379 11 GQELEYIAEAISEG-K-------LSGDGPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFV 82 (376)
T ss_pred HHHHHHHHHHHHcC-C-------ccCCcHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcH
Confidence 34466777666552 1 11344567899999999999999999999998887666666 789999999999999
Q ss_pred HHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 040324 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYK 270 (488)
Q Consensus 197 ~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g 270 (488)
++...+...|++++.++.+ |++++++.+.+ .+++++.+ ...|...++++|.++|++||
T Consensus 83 ~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~------------~tk~Iip~----~~~G~~~d~~~I~~la~~~~ 146 (376)
T TIGR02379 83 STANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH------------RTKAIVPV----HYAGVACDMDTIMALANKHQ 146 (376)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc------------CceEEEEe----CCCCCccCHHHHHHHHHHCC
Confidence 9998888899999998754 66777776653 24544432 35688889999999999999
Q ss_pred cEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccc--ccccCC--cccEEEeC-HHHHHHHHhhCC-C--------
Q 040324 271 AYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTF--SKSFGS--YGGYIAGS-KELIQYLKYNCP-A-------- 336 (488)
Q Consensus 271 ~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~--sK~~g~--~Gg~i~~~-~~~~~~~~~~~~-~-------- 336 (488)
+++|+|++|+.|.. ..|+.... ++ |+.+.|| +|.+.. .||+++.+ +++.+.++.... +
T Consensus 147 i~vIeDaa~~~g~~-~~~~~~g~-~~------~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~ 218 (376)
T TIGR02379 147 LFVIEDAAQGVMST-YKGRALGS-IG------HLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFR 218 (376)
T ss_pred CEEEEECccccCCc-cCCcccCC-CC------CEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccc
Confidence 99999999996542 22321111 11 3443343 276654 45776665 788877764321 0
Q ss_pred ----------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC----CeecC-CCCC---
Q 040324 337 ----------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG----FEVLG-DNDS--- 398 (488)
Q Consensus 337 ----------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~~-~~~~--- 398 (488)
..+...++.+.++.+++.|+.+ ++..++-+++.++..+.|..+. ..... +.+.
T Consensus 219 ~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l---------~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~ 289 (376)
T TIGR02379 219 GEVDKYTWRDIGSSYLPSELQAAYLWAQLEQA---------DRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHN 289 (376)
T ss_pred cCCCcceeeeecccCCccHHHHHHHHHHHHHh---------HHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeee
Confidence 1122235666767777777765 4566666666677777776542 22211 1111
Q ss_pred -CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCc--c----C-------------CCCeEEEeecCCCCHHHHHHHHH
Q 040324 399 -PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT--P----L-------------LLARARICISASHTKEDLIEALE 458 (488)
Q Consensus 399 -~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~--~----~-------------~~~~iRi~~~~~~t~edid~~l~ 458 (488)
.++++.+.......++.+.|.++||.+.+...|.. + . ....+.+-++..+|++|++++++
T Consensus 290 ~~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~ 369 (376)
T TIGR02379 290 AHMFYIKLKDEDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQ 369 (376)
T ss_pred eEEEEEEECCcCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHH
Confidence 34455554433567899999999998773111111 1 0 02346666677799999999999
Q ss_pred HHHHHH
Q 040324 459 VISRIG 464 (488)
Q Consensus 459 ~l~~~~ 464 (488)
+|++++
T Consensus 370 ~i~~~~ 375 (376)
T TIGR02379 370 TICDYL 375 (376)
T ss_pred HHHHHh
Confidence 998864
No 274
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.86 E-value=1.5e-19 Score=186.30 Aligned_cols=290 Identities=17% Similarity=0.191 Sum_probs=185.9
Q ss_pred CChhhHHHHHHHHHHHhCCC-CeEEeCCcHH-HHhhhhhccc-CCCcEEEEeCCCchHHHHHHHh----cCCeEEEeeCC
Q 040324 143 GTLALHNELEECVARFVGKP-AAIVFGMGYV-TNSSILPVLM-GKGSLIISDSLNHNSIVNGARG----SGATIRVFQHN 215 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~-a~~~~~~~~~-~~~~~Vl~~~~~h~~~~~~~~~----~g~~v~~~~~~ 215 (488)
|..+...++.+.+++++|.+ ..+.+++|+. +...++.++. .+++.|++..+.|+++...+.. .|.+++.++.+
T Consensus 109 g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~ 188 (447)
T PRK00451 109 GTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYE 188 (447)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCC
Confidence 44455567778889999975 3454555544 4455555553 6889999999999998877654 58898888865
Q ss_pred ----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE--EccccccccCCCCC
Q 040324 216 ----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYL--DEAHSIGAVGKTGR 289 (488)
Q Consensus 216 ----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~--DE~~s~g~~g~~g~ 289 (488)
|++++++.+.+ +++++++. .. +.+|.+.|+++|.++|+++|+++++ |.+ +.|.+...
T Consensus 189 ~~~~d~~~l~~~i~~------------~t~~v~l~-~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~-- 251 (447)
T PRK00451 189 DGVTDLEALEAAVDD------------DTAAVVVQ-YP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPP-- 251 (447)
T ss_pred CCCCCHHHHHHhcCC------------CeEEEEEE-CC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCc--
Confidence 67778777643 24444444 44 6789999999999999999999998 543 32222111
Q ss_pred CcchhcCCCCCCccEEEc---cccccc--CCcc-cEEEeCHHHHHHHHhh-------------------------C-CCC
Q 040324 290 GVCELLGVDTSDVDIMMG---TFSKSF--GSYG-GYIAGSKELIQYLKYN-------------------------C-PAH 337 (488)
Q Consensus 290 ~~~~~~~v~p~~~di~~~---t~sK~~--g~~G-g~i~~~~~~~~~~~~~-------------------------~-~~~ 337 (488)
...++|++++ +++|.+ |++| |+++.++++++.+... . ...
T Consensus 252 --------~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (447)
T PRK00451 252 --------GEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKA 323 (447)
T ss_pred --------ccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccc
Confidence 1134578877 455554 4445 8888888887764110 0 000
Q ss_pred cccCCCCH-HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEE-EEeCCcchHHHH
Q 040324 338 LYATSISP-PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMP-IMVYNPAKVSSF 414 (488)
Q Consensus 338 ~~~~~~~p-~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~-~~~~~~~~~~~~ 414 (488)
+...+.+. ....++..+++.+ ..+..++..+++.++.+++.++|+++ |+.+. . +..+. +.+..+....++
T Consensus 324 ~~~~~~~~~~~~~aaa~~l~~~----~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~--~~~~~~~~v~~~~~~~~~ 396 (447)
T PRK00451 324 TSNICTNQALNALAAAIYMSLL----GPEGLRELAEQNHQKAHYLAERLAEIGGVELF-D--GPFFNEFVVRLPKPAEEV 396 (447)
T ss_pred cccccccHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-C--CCeEEEEEEecCCCHHHH
Confidence 11111111 1112222344443 12256788899999999999999988 56664 2 22222 112212346789
Q ss_pred HHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 415 SRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 415 ~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
+++|+++|+.....+.+..+...+.+|++++..+|++|+++++++|++++
T Consensus 397 ~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 397 NEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred HHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 99999998874321222222224689999998899999999999998764
No 275
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.86 E-value=6.2e-19 Score=178.12 Aligned_cols=212 Identities=19% Similarity=0.238 Sum_probs=164.6
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++.+|++.|.+.+++++||+.|+..++..+.++||.|+++.+.|+.+.. .+...|.++..++.+|++++
T Consensus 64 ~p~~~~le~~lA~l~g~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 143 (403)
T PRK07503 64 NPTLALLEQRMASLEGGEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAAL 143 (403)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHH
Confidence 34568999999999999999999999999887777888999999999998876543 34557888888888889988
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+.+ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++|+.+..+ +.. + .
T Consensus 144 ~~~i~~-------------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~---~~l----~---~ 200 (403)
T PRK07503 144 KAAISD-------------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ---RPL----E---L 200 (403)
T ss_pred HHhcCc-------------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---Cch----h---h
Confidence 887754 2335666888999999999999999999999999999999844322 111 1 2
Q ss_pred CccEEEcccccccCCc----ccEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
+.|+++.|++|.+|+. ||++++++++.+.++........+..++|..++.++..|+.+ ..+.++..+
T Consensus 201 g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl---------~~r~~~~~~ 271 (403)
T PRK07503 201 GADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTL---------ALRMDRHCA 271 (403)
T ss_pred CCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchH---------HHHHHHHHH
Confidence 3489999999999874 488888898888876431111234558888888777777765 456666677
Q ss_pred HHHHHHHHHHhC
Q 040324 377 NSNFFRSKLQKM 388 (488)
Q Consensus 377 ~~~~l~~~L~~~ 388 (488)
+...+.+.|++.
T Consensus 272 na~~~a~~L~~~ 283 (403)
T PRK07503 272 SAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHhC
Confidence 888888888765
No 276
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=1.8e-19 Score=180.22 Aligned_cols=284 Identities=14% Similarity=0.162 Sum_probs=193.1
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~d~~~ 219 (488)
..+...+|++++|++.|.+.++++++|++++..++ .+..+||.|++..+.|+.+.. .++..|.++..++..|+++
T Consensus 50 ~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 128 (366)
T PRK08247 50 GNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKA 128 (366)
T ss_pred CCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHH
Confidence 34567899999999999999999999998886555 467899999999998887543 3445789999998889999
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++++.+ ++.+|+++.+.++.|...++++|.++|+++|+++|+||+|..+.+.. .+ .
T Consensus 129 l~~~i~~-------------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~---------p~-~ 185 (366)
T PRK08247 129 IEQAITP-------------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR---------PL-E 185 (366)
T ss_pred HHHhccc-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC---------ch-h
Confidence 9888754 33466677777888888899999999999999999999996332221 01 1
Q ss_pred CCccEEEcccccccCCc----ccEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (488)
.+.|+++.|++|.+++. +|+++++ +++.+.+...... .+...+|..+..++..|+.+ ..++++.
T Consensus 186 ~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~--~g~~~s~~~a~l~~~~l~tl---------~~r~~~~ 254 (366)
T PRK08247 186 EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNA--AGAVLSPFDSWLLIRGMKTL---------ALRMRQH 254 (366)
T ss_pred cCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHh--cCCCCChHHHHHHHhccCcH---------HHHHHHH
Confidence 34589999999999863 4888886 6777766544332 22336777666666666543 4566677
Q ss_pred HHHHHHHHHHHHhC-CCe-ecCCCCCCeEEEEeCCcchHHHHHHHHH----------HCCceEEeecCC--Cc-------
Q 040324 375 RENSNFFRSKLQKM-GFE-VLGDNDSPVMPIMVYNPAKVSSFSRECL----------KQNVAIVTVGFP--AT------- 433 (488)
Q Consensus 375 ~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~Gi~v~~~~~~--~~------- 433 (488)
+++.+.+.+.|++. ++. +..+..+.++.+.+........|.+.+. .+.+++.|.... ..
T Consensus 255 ~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~ 334 (366)
T PRK08247 255 EENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIA 334 (366)
T ss_pred HHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECCHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHh
Confidence 99999999999986 554 3344345566665543222223333322 112333331100 00
Q ss_pred -cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 434 -PLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 434 -~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
....+.+||++.+ |+++.+++-|++++++
T Consensus 335 ~gi~~~~~R~svGl----E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 335 NGVCNRLLRFSVGI----ENVEDLIADLKQAFKQ 364 (366)
T ss_pred cCCCCCeEEEEecc----CCHHHHHHHHHHHHhh
Confidence 1224689999854 4566666666666654
No 277
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.86 E-value=2e-19 Score=181.36 Aligned_cols=210 Identities=14% Similarity=0.133 Sum_probs=163.9
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++.|.+.++++++|+.++..++.++.++||.|+++.+.|+.+.... ...|.++..++..|++++
T Consensus 64 ~p~~~~Le~~lA~l~G~~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l 143 (398)
T PRK07504 64 NPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNW 143 (398)
T ss_pred CchHHHHHHHHHHHhCCCeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHH
Confidence 3556899999999999998889999999987777777899999999999998765443 345888888887789998
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+||+|+.+.+.. ..+ .
T Consensus 144 ~~ai~~-------------~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~----~~~------~ 200 (398)
T PRK07504 144 EKAVRP-------------NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQK----PLE------L 200 (398)
T ss_pred HHhcCc-------------CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCC----chh------h
Confidence 887753 34577788999999999999999999999999999999998543321 111 2
Q ss_pred CccEEEcccccccCCc----ccEEEeCHHHHH-HHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSKELIQ-YLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~~~~~-~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
+.|+++.|++|.+++. ||+++++++.++ .++.... ..+..++|..++.++..|+.+ ..+.++..
T Consensus 201 gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~--~~g~~~s~~~A~~~l~~L~tl---------~~R~~~~~ 269 (398)
T PRK07504 201 GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR--HTGPSLSPFNAWTLLKGLETL---------PVRVRQQT 269 (398)
T ss_pred CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccchH---------HHHHHHHH
Confidence 3589999999999764 378888877654 3332211 133458899888888888876 56777778
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
++...+.+.|++.
T Consensus 270 ~na~~la~~L~~~ 282 (398)
T PRK07504 270 ESAAAIADFLAGH 282 (398)
T ss_pred HHHHHHHHHHHcC
Confidence 8899999988875
No 278
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.86 E-value=8.9e-19 Score=177.01 Aligned_cols=328 Identities=13% Similarity=0.056 Sum_probs=222.7
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC----CeEE--eCCcHHHHhhhhhccc--------
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP----AAIV--FGMGYVTNSSILPVLM-------- 182 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~----~~i~--~~sGs~a~~~~~~~~~-------- 182 (488)
+|.+.+++.+.+.+...++.++ .......+++.+.+++++|.+ +.++ +++||+||..++.+..
T Consensus 54 ~p~~~~~~~~~l~~~~~np~s~---~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 54 EPEARKLMDETINKNMIDKDEY---PQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888888886543332221 223467788899999999976 3444 5789999865543321
Q ss_pred --C---CCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC
Q 040324 183 --G---KGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS 251 (488)
Q Consensus 183 --~---~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s 251 (488)
+ ....|+++...|.++..+++..|.++..++.+ |+++|++.|++ ++.+|++..+.+
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~-------------~t~lV~~t~g~t 197 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE-------------NTIGVVCILGTT 197 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh-------------CCeEEEEEeCCC
Confidence 1 12479999999999999998888887777642 68888888865 356777788889
Q ss_pred CCCCCCChHHHHHHHHHc------CcEEEEEccccccccCC-CCCCcchhcCCCCCCccEEEccccccc-CCcc-cEEEe
Q 040324 252 MEGELCKLPEIITICKRY------KAYTYLDEAHSIGAVGK-TGRGVCELLGVDTSDVDIMMGTFSKSF-GSYG-GYIAG 322 (488)
Q Consensus 252 ~~G~~~~l~~l~~l~~~~------g~~li~DE~~s~g~~g~-~g~~~~~~~~v~p~~~di~~~t~sK~~-g~~G-g~i~~ 322 (488)
..|.+.|+++|.++|+++ |+++++|.+|+.+.... .++.. +++....+|.+..+.+|.+ |..| |+++.
T Consensus 198 ~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~---~~~~~~~~DSis~s~HK~~~~P~g~G~l~~ 274 (431)
T TIGR01788 198 YTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLE---WDFRLPRVKSINVSGHKYGLVYPGVGWVIW 274 (431)
T ss_pred CCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCch---hhcCCCCceEEEECchhccCCCCCcEEEEE
Confidence 999999999999999999 99999999998332110 11111 1222345788999999986 6666 77766
Q ss_pred CHH--HHHHHHhhC-------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCee
Q 040324 323 SKE--LIQYLKYNC-------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEV 392 (488)
Q Consensus 323 ~~~--~~~~~~~~~-------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 392 (488)
+++ +.+.+.... ...+...+-+..........|..+ +.....++.++..+++++|.+.|++. ++++
T Consensus 275 r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~l----G~~G~~~i~~~~~~la~~l~~~L~~~~~~el 350 (431)
T TIGR01788 275 RDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRL----GREGYRKIMQNSLDVARYLAEEIAKLGPFEI 350 (431)
T ss_pred eChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHh----cHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 543 323322110 001111111111223344555544 33466788899999999999999998 4887
Q ss_pred cCC-CCCCeEEEEeCC----cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 393 LGD-NDSPVMPIMVYN----PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 393 ~~~-~~~~~~~~~~~~----~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
..+ +..+++.+.+.. .....++.++|.++|+.+...-.|..-.+...+|+++-..++++.++.+++.|.+++..+
T Consensus 351 ~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 351 ISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred eeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 765 455666666543 234568999999999876543334433445679999988899999999999999998765
No 279
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.86 E-value=1.8e-18 Score=174.00 Aligned_cols=306 Identities=20% Similarity=0.186 Sum_probs=204.1
Q ss_pred ccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-cCCCcEEEEeCCCch
Q 040324 118 EYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHN 196 (488)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-~~~~~~Vl~~~~~h~ 196 (488)
++-.+++.+.+++. ..+ ..+...+||+++|+++|.+.++++++|++|+..++.++ .++||.|+++.+.|.
T Consensus 14 ~~e~~~~~~~l~~~-~~~--------~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~ 84 (379)
T PRK11658 14 DEELAAVKEVLRSG-WIT--------TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWV 84 (379)
T ss_pred HHHHHHHHHHHHcC-Ccc--------CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHH
Confidence 34466666666542 111 23456899999999999999999999999998888888 789999999999999
Q ss_pred HHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcC
Q 040324 197 SIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYK 270 (488)
Q Consensus 197 ~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g 270 (488)
++...+...|++++.++.+ |++++++.+.+ .+++++.+. ..|...++++|.++|+++|
T Consensus 85 ~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~------------~tkav~~~~----~~G~~~d~~~i~~~a~~~g 148 (379)
T PRK11658 85 STLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP------------RTKAIIPVH----YAGAPADLDAIRAIGERYG 148 (379)
T ss_pred HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc------------CCeEEEEeC----CCCCcCCHHHHHHHHHHcC
Confidence 9998888999999988743 67888877653 245544332 3688889999999999999
Q ss_pred cEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cccEEEeC-HHHHHHHHhhC-CCC----------
Q 040324 271 AYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YGGYIAGS-KELIQYLKYNC-PAH---------- 337 (488)
Q Consensus 271 ~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~Gg~i~~~-~~~~~~~~~~~-~~~---------- 337 (488)
+++|+|++|++|..- .|+.+ + ....+++..+-+|.+.+ .||+++++ +++.+.++... ++.
T Consensus 149 i~vi~D~a~a~g~~~-~~~~~----g--~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 221 (379)
T PRK11658 149 IPVIEDAAHAVGTYY-KGRHI----G--ARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQ 221 (379)
T ss_pred CeEEEECCCccCCeE-CCeec----C--CCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcc
Confidence 999999999865432 22211 1 12225554445577743 45777764 77777665421 110
Q ss_pred -----------cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeec-CCCC----C-Ce
Q 040324 338 -----------LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVL-GDND----S-PV 400 (488)
Q Consensus 338 -----------~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~----~-~~ 400 (488)
.+...++.+.+|.++..|+. .++..++-+++.+++.+.|+++++... .+.. + ..
T Consensus 222 ~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~---------l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 292 (379)
T PRK11658 222 GRAPQAEVLTPGYKYNLADINAAIALVQLAK---------LEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHL 292 (379)
T ss_pred cCCCcceeeccccccCcCHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEE
Confidence 01122445555555555554 366777778888888999987754322 2111 1 23
Q ss_pred EEEEeCC---cchHHHHHHHHHHCCceEEeecCCCc--------------cC----CCCeEEEeecCCCCHHHHHHHHHH
Q 040324 401 MPIMVYN---PAKVSSFSRECLKQNVAIVTVGFPAT--------------PL----LLARARICISASHTKEDLIEALEV 459 (488)
Q Consensus 401 ~~~~~~~---~~~~~~~~~~l~~~Gi~v~~~~~~~~--------------~~----~~~~iRi~~~~~~t~edid~~l~~ 459 (488)
+++.+.. .....++.+.|.++||.+.....|.. |. ....+.+-++...|++|+++++++
T Consensus 293 ~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~ 372 (379)
T PRK11658 293 FIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITA 372 (379)
T ss_pred EEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHH
Confidence 3444432 12466899999999998663211110 00 113455556667899999999999
Q ss_pred HHHHH
Q 040324 460 ISRIG 464 (488)
Q Consensus 460 l~~~~ 464 (488)
|++++
T Consensus 373 i~~~~ 377 (379)
T PRK11658 373 LQQIA 377 (379)
T ss_pred HHHHH
Confidence 99875
No 280
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.86 E-value=5.5e-19 Score=178.21 Aligned_cols=210 Identities=16% Similarity=0.152 Sum_probs=166.2
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHH----HHHHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~----~~~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+||+.+|++.|.+++++++||+.|+..++.++.++||.|+++...|+.+. ..++..|.++..++.+|++++
T Consensus 69 ~p~~~~le~~lA~l~g~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l 148 (403)
T PRK07810 69 NPTVSMFEERLRLIEGAEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQW 148 (403)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 3456899999999999999999999999998888888899999999887775543 335567999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++++++ ++.+|++|.+.++.|.+.++++|+++|+++|+++|+|++|+.+.+.. ++ ..
T Consensus 149 ~~ai~~-------------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~---------~~-~~ 205 (403)
T PRK07810 149 EEALSV-------------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQR---------GL-PL 205 (403)
T ss_pred HHhcCc-------------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCC---------hh-hc
Confidence 988864 34577789999999999999999999999999999999998543321 11 12
Q ss_pred CccEEEcccccccCCc----ccEEEeCHHHHH-HHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSKELIQ-YLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~~~~~-~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
++|+++.|++|.+++. ||+++++++.+. .++.... ..+..++|..++.++..|+.+ ..+.++..
T Consensus 206 gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~--~~g~~~s~~~a~l~l~~L~tl---------~~R~~~~~ 274 (403)
T PRK07810 206 GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMR--HTGPALSAFNAWVLLKGLETL---------ALRVRHSN 274 (403)
T ss_pred CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHH--HhCCCCCHHHHHHHHhccCcH---------HHHHHHHH
Confidence 4589999999999763 488888877654 3433222 133458899888888888865 66788888
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
++...+.+.|++.
T Consensus 275 ~~a~~~a~~L~~~ 287 (403)
T PRK07810 275 ASALRIAEFLEGH 287 (403)
T ss_pred HHHHHHHHHHhcC
Confidence 8888888888875
No 281
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.85 E-value=2.9e-19 Score=183.09 Aligned_cols=275 Identities=18% Similarity=0.136 Sum_probs=176.2
Q ss_pred eEEeCCcHHHH-hhhhhc-----ccCCCcEEEEeCCCchHHHHHHHhc--CCeEEEeeCC------------CHHHHHHH
Q 040324 164 AIVFGMGYVTN-SSILPV-----LMGKGSLIISDSLNHNSIVNGARGS--GATIRVFQHN------------TPSHLEEV 223 (488)
Q Consensus 164 ~i~~~sGs~a~-~~~~~~-----~~~~~~~Vl~~~~~h~~~~~~~~~~--g~~v~~~~~~------------d~~~Le~~ 223 (488)
.+++++|+.+. ..++.+ ++.+||.|++..|+|+.+...+.+. |.+++.++.. |.++++++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~ 236 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL 236 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence 57677666654 444444 6899999999999999999887776 5666655532 34555554
Q ss_pred HHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHc--CcEEEEEccccccccCCCCCCcchhcCCC
Q 040324 224 LREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRY--KAYTYLDEAHSIGAVGKTGRGVCELLGVD 298 (488)
Q Consensus 224 l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~--g~~li~DE~~s~g~~g~~g~~~~~~~~v~ 298 (488)
+. +..++++++ ...+++|.+.+ +++|+++|++| +++||+||+|. .|........ ...
T Consensus 237 ~~------------~~~kai~l~-nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~--~f~~~~~sl~---~~~ 298 (521)
T TIGR03801 237 RD------------PSIKALFVV-NPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG--TFVDDFRSLF---AEL 298 (521)
T ss_pred cC------------CCCcEEEEe-CCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch--hhcccccchh---hhC
Confidence 32 235666666 45688888776 88889999987 99999999998 4432211121 222
Q ss_pred CCCccEEEcccccccCCcc---cEEEeCHH-----HH--------HHH------------------------HhhCCCCc
Q 040324 299 TSDVDIMMGTFSKSFGSYG---GYIAGSKE-----LI--------QYL------------------------KYNCPAHL 338 (488)
Q Consensus 299 p~~~di~~~t~sK~~g~~G---g~i~~~~~-----~~--------~~~------------------------~~~~~~~~ 338 (488)
| +..|++.||||.+|.+| ||++++++ ++ +.+ +.....++
T Consensus 299 ~-~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~ 377 (521)
T TIGR03801 299 P-YNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHT 377 (521)
T ss_pred C-CCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhcc
Confidence 3 34688999999999988 99998754 22 111 11111122
Q ss_pred ccCCCCHHHHHH-HH-HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee--cCCCCCCeEEEEeCCcc-----
Q 040324 339 YATSISPPAAEQ-II-SAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEV--LGDNDSPVMPIMVYNPA----- 409 (488)
Q Consensus 339 ~~~~~~p~~~aa-~~-a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~~~~~----- 409 (488)
.+ .+.+.+.+ ++ ++...+.. .....++..+.++++.+.+.+.| |+.+ ..+.++.++++.+....
T Consensus 378 ~g--~s~p~Q~q~al~a~~all~~--~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~ 450 (521)
T TIGR03801 378 AG--LSTPQQVQMALFSLFALMDK--ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYG 450 (521)
T ss_pred CC--CCcHHHHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcc
Confidence 22 33333321 22 22222221 12345667778888888888777 5443 33445566666654211
Q ss_pred -----------hHHHHHHHHHHC-CceEEee-cCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 410 -----------KVSSFSRECLKQ-NVAIVTV-GFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 410 -----------~~~~~~~~l~~~-Gi~v~~~-~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
...+|+.+|+++ ||.+.|. +|.. .++.+|+++ ...+++++.++.++|.++++++.
T Consensus 451 ~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~---~~~~vRisl-a~l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 451 EEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGG---PEWSVRVSL-ANLNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred hHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCC---CCCeEEEEe-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 345788889877 9999972 3321 245799998 34789999999999999987763
No 282
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=2.6e-18 Score=167.52 Aligned_cols=306 Identities=19% Similarity=0.220 Sum_probs=212.3
Q ss_pred cchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-cCCCcEEEEeCCCchH
Q 040324 119 YCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHNS 197 (488)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-~~~~~~Vl~~~~~h~~ 197 (488)
+..+++.+.+++.-.. ..+...++|+.+|+++|.+.++.++|||.|+..+++++ .++||.|++++.++.+
T Consensus 16 ~e~~~v~~vl~sg~i~---------~G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvA 86 (374)
T COG0399 16 EELAAVQEVLKSGWLT---------GGPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVA 86 (374)
T ss_pred HHHHHHHHHHHcCCee---------cChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHH
Confidence 4455666666552111 13456899999999999999999999999998777755 5999999999999999
Q ss_pred HHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCc
Q 040324 198 IVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKA 271 (488)
Q Consensus 198 ~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~ 271 (488)
+...+...|++++.++.+ |++.+|+.|.+ .++++|.+ ..+ |..+++++|.++|++||+
T Consensus 87 Tan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~------------~tKAIipV-hl~---G~~~dm~~i~~la~~~~l 150 (374)
T COG0399 87 TANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITP------------RTKAIIPV-HLA---GQPCDMDAIMALAKRHGL 150 (374)
T ss_pred HHHHHHHcCCeEEEEecCCcccCCCHHHHHHHccc------------CCeEEEEe-hhc---cCCCCHHHHHHHHHHcCC
Confidence 999999999999998754 89999999875 25665555 344 777899999999999999
Q ss_pred EEEEEccccccccCCCCCCcchhcCCCCCCccEEEccc--ccccCCc-ccEEEeC-HHHHHHHHhhC---CC--------
Q 040324 272 YTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTF--SKSFGSY-GGYIAGS-KELIQYLKYNC---PA-------- 336 (488)
Q Consensus 272 ~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~--sK~~g~~-Gg~i~~~-~~~~~~~~~~~---~~-------- 336 (488)
+||.|.+|++|.. ..|+.+.. +| |+-+.|| +|.++.+ ||+++++ +++.+.++... ..
T Consensus 151 ~vIEDaAqa~Ga~-y~gk~vGt-~G------d~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~ 222 (374)
T COG0399 151 PVIEDAAQAHGAT-YKGKKVGS-FG------DIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYL 222 (374)
T ss_pred eEEEEcchhccCe-ecCccccc-cc------ceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCccccce
Confidence 9999999997654 23333222 22 4445565 6888764 6777765 67776665321 11
Q ss_pred ---CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCCC-----CeEEEEeCC
Q 040324 337 ---HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDNDS-----PVMPIMVYN 407 (488)
Q Consensus 337 ---~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~-----~~~~~~~~~ 407 (488)
..+...++-+.+|.++..|+.+ ++..++-+++.++..+.|+++. +.+...... ...++.+..
T Consensus 223 ~~~~G~N~rm~~iqAAigl~QL~~l---------~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~ 293 (374)
T COG0399 223 HEELGYNYRLTEIQAAIGLAQLERL---------DEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE 293 (374)
T ss_pred eeecccccCHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC
Confidence 1122346667777777777765 5566666777778888888763 332222111 334444444
Q ss_pred c-chHHHHHHHHHHCCceEEeecCCC----------------ccC----CCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 408 P-AKVSSFSRECLKQNVAIVTVGFPA----------------TPL----LLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 408 ~-~~~~~~~~~l~~~Gi~v~~~~~~~----------------~~~----~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
. ..-..+.+.|.++||.......|. .|. ....+.+-+...+|++|+++++++|.+++..
T Consensus 294 ~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 294 EGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred CCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 3 345678888999977632111110 011 1346778778889999999999999998753
No 283
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.6e-19 Score=181.12 Aligned_cols=210 Identities=17% Similarity=0.219 Sum_probs=161.9
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH---HhcCCeEEEeeCCCHHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA---RGSGATIRVFQHNTPSHLE 221 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~---~~~g~~v~~~~~~d~~~Le 221 (488)
.+...+||+++|++.|.++++++++|++|+..++.++.++||.|+++.+.|+++...+ ...|.++..+. .|+++++
T Consensus 52 np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-~d~~~l~ 130 (385)
T PRK08574 52 NPTLRPLEEALAKLEGGVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-PSTEDII 130 (385)
T ss_pred CccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC-CCHHHHH
Confidence 4566899999999999999999999999998888888999999999999999987665 33466666553 3677887
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCC
Q 040324 222 EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSD 301 (488)
Q Consensus 222 ~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~ 301 (488)
+.+++. ++.+|+++.+.++.|.+.++++|+++|+++|+++|+|++|+.+...+ ++ ..+
T Consensus 131 ~~i~~~------------~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~---------~l-~~G 188 (385)
T PRK08574 131 EAIKEG------------RTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYR---------PL-RHG 188 (385)
T ss_pred HhcCcc------------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCC---------hh-hhC
Confidence 776531 23466689999999999999999999999999999999997543321 11 134
Q ss_pred ccEEEcccccccCCc----cc-EEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 302 VDIMMGTFSKSFGSY----GG-YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 302 ~di~~~t~sK~~g~~----Gg-~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
.|+++.|++|.+++. || ++..++++.+.++..... ++..++|..++.++..|+.+ ..+.++..+
T Consensus 189 aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~--~g~~~~p~~a~l~l~~l~tL---------~~R~~~~~~ 257 (385)
T PRK08574 189 ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRR--LGTIMQPFEAYLVLRGLKTL---------EVRFERQCR 257 (385)
T ss_pred CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHh--cCCCCCHHHHHHHHcccCcH---------HHHHHHHHH
Confidence 589999999999763 46 455578887777654332 44558888787777777765 557777788
Q ss_pred HHHHHHHHHHhC
Q 040324 377 NSNFFRSKLQKM 388 (488)
Q Consensus 377 ~~~~l~~~L~~~ 388 (488)
+...+.+.|++.
T Consensus 258 na~~la~~L~~~ 269 (385)
T PRK08574 258 NAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHcC
Confidence 888888888765
No 284
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.85 E-value=3.1e-18 Score=153.69 Aligned_cols=320 Identities=18% Similarity=0.256 Sum_probs=222.0
Q ss_pred ccchHHHHHHHHHcCCCCCCcc------cCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEe
Q 040324 118 EYCTPRVIDSLKKYSHSTCSSR------VDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISD 191 (488)
Q Consensus 118 ~~v~~a~~~~l~~~~~~~~~~~------~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~ 191 (488)
..+.+++.+++-++|.+++-+. ...-..+....+-+.||+|+|.+.+.++...-++-.+.+.+++++||.|++|
T Consensus 27 GiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D 106 (382)
T COG1103 27 GILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVD 106 (382)
T ss_pred CcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEc
Confidence 3456777888888877765432 2222345556777779999999877766665566689999999999999999
Q ss_pred CCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHH
Q 040324 192 SLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIIT 264 (488)
Q Consensus 192 ~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~ 264 (488)
+..|.++.-++...|..+..+|+. +++...+.|++..+++ +...++.+...+-+.-|.+.+-+++.+
T Consensus 107 ~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~------g~~~~lallTh~Dg~YGNl~Dakkva~ 180 (382)
T COG1103 107 SLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEG------GDPPALALLTHVDGEYGNLADAKKVAK 180 (382)
T ss_pred CcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhcc------CCCceEEEEeccCCCcCCchhhHHHHH
Confidence 999999999999999999999854 6888888888765543 123555555566666688889999999
Q ss_pred HHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhC-CCC----
Q 040324 265 ICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNC-PAH---- 337 (488)
Q Consensus 265 l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~-~~~---- 337 (488)
+|++||+++++..+|+.|.+.-+++ .-+.|++++|-+|+++..| |++..+.+..+.+-..+ ..+
T Consensus 181 ic~e~gvPlllN~AYt~Grmpvs~k---------e~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KE 251 (382)
T COG1103 181 ICREYGVPLLLNCAYTVGRMPVSGK---------EIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKE 251 (382)
T ss_pred HHHHcCCceEeecceeecccccccc---------ccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccce
Confidence 9999999999999999776654333 1345999999999998755 99999988887664433 211
Q ss_pred --ccc--CCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCCCCeEEEEeCCcc---
Q 040324 338 --LYA--TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDNDSPVMPIMVYNPA--- 409 (488)
Q Consensus 338 --~~~--~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~--- 409 (488)
..+ ..+.|+ ...++++-... +.-.....-.+++++|.+.|+++| +...+...-..-.+.+..+.
T Consensus 252 vellGCT~rGapi--vTlmASfP~V~------eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~e 323 (382)
T COG1103 252 VELLGCTVRGAPI--VTLMASFPHVV------ERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHE 323 (382)
T ss_pred eeeecccccCchH--HHHHhcCHHHH------HHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHH
Confidence 111 123332 23334444331 122333444567889999999985 55444322211112232222
Q ss_pred -------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 410 -------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 410 -------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
..--+.++|.++||.-...| ....+.+++ +..++|++++.++++++++++.
T Consensus 324 Iakk~~r~gyFlY~ELK~RgI~GI~~G------~Tk~~K~sv-yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 324 IAKKHKRKGYFLYEELKKRGIHGIQPG------QTKYFKLSV-YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred HHHhCcCCceeeHHHHHhcCccccccC------ceeEEEEEe-ecCCHHHHHHHHHHHHHHHHhc
Confidence 11147788999988755322 135788887 6799999999999999998765
No 285
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.85 E-value=2.6e-18 Score=172.74 Aligned_cols=304 Identities=14% Similarity=0.110 Sum_probs=202.9
Q ss_pred chHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-cCCCcEEEEeCCCchHH
Q 040324 120 CTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHNSI 198 (488)
Q Consensus 120 v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-~~~~~~Vl~~~~~h~~~ 198 (488)
-.+++.+.++.. . .+|..+..+++++.++++++.+.++++++|+++...++.++ .++||.|+++.++|.++
T Consensus 13 ~~~~~~~~l~~~-~-------~~g~~~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~ 84 (375)
T PRK11706 13 ELDYIQQAMSSG-K-------LCGDGGFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST 84 (375)
T ss_pred HHHHHHHHHHcC-C-------ccCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHH
Confidence 355666666542 1 12445667899999999999999999999999876655544 68999999999999999
Q ss_pred HHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcE
Q 040324 199 VNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAY 272 (488)
Q Consensus 199 ~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~ 272 (488)
...+...|++++.++.+ |++++++.+.+ .+++++++ +..|...++++|.++|++||++
T Consensus 85 ~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~------------~tk~i~~~----~~~G~~~~~~~i~~la~~~~i~ 148 (375)
T PRK11706 85 ANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP------------KTRAIVPV----HYAGVACEMDTIMALAKKHNLF 148 (375)
T ss_pred HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC------------CCeEEEEe----CCCCCccCHHHHHHHHHHcCCE
Confidence 99999999999988743 67888877653 24555554 3468888999999999999999
Q ss_pred EEEEccccccccCCCCCCcchhcCCCCCCccEEEcccc--cccCC--cccEEEeCHHHHHHHHhhCCC------------
Q 040324 273 TYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFS--KSFGS--YGGYIAGSKELIQYLKYNCPA------------ 336 (488)
Q Consensus 273 li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~s--K~~g~--~Gg~i~~~~~~~~~~~~~~~~------------ 336 (488)
+|+|++|++|.. ..|+.... ++ |+-+.||+ |.++. +|+++..++++.+.++.....
T Consensus 149 vIeD~a~a~g~~-~~~~~~g~-~~------~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 220 (375)
T PRK11706 149 VVEDAAQGVMST-YKGRALGT-IG------HIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQV 220 (375)
T ss_pred EEEECccccccc-cCCeeeec-Cc------CEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCC
Confidence 999999996652 12222111 11 44444554 99964 235556667887755432210
Q ss_pred -------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC----Ceec-CCCC----CCe
Q 040324 337 -------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG----FEVL-GDND----SPV 400 (488)
Q Consensus 337 -------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----~~~~-~~~~----~~~ 400 (488)
..++..++.+.++.+++.|+.+ ++..++-+++.+++.+.|..+. +... .+.+ .++
T Consensus 221 ~~~~~~~~g~~~~~~~~~aa~~~~ql~~l---------~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 291 (375)
T PRK11706 221 DKYTWVDIGSSYLPSELQAAYLWAQLEAA---------DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHM 291 (375)
T ss_pred CcceeeecccccCcCHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEE
Confidence 0112224556666667777654 4566666777778888887652 2221 1111 235
Q ss_pred EEEEeCCcchHHHHHHHHHHCCceEEeecCCCc---------------c----CCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 401 MPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT---------------P----LLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 401 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---------------~----~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
+++.+.......++.+.|.++||.+.....|.. | .....+-+-++...|++|+++++++|+
T Consensus 292 ~~~~~~~~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 371 (375)
T PRK11706 292 FYIKLRDLEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTIL 371 (375)
T ss_pred EEEEECCcCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHH
Confidence 666665444577899999999998763111100 0 012345555566689999999999998
Q ss_pred HHH
Q 040324 462 RIG 464 (488)
Q Consensus 462 ~~~ 464 (488)
+++
T Consensus 372 ~~~ 374 (375)
T PRK11706 372 EFF 374 (375)
T ss_pred HHh
Confidence 864
No 286
>PLN02368 alanine transaminase
Probab=99.85 E-value=6.1e-19 Score=177.97 Aligned_cols=255 Identities=14% Similarity=0.123 Sum_probs=174.8
Q ss_pred hHHHHHHHHHHHh----CC---CCeEEeCCcHHH-Hhhhhhccc-CCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--
Q 040324 147 LHNELEECVARFV----GK---PAAIVFGMGYVT-NSSILPVLM-GKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-- 215 (488)
Q Consensus 147 ~~~~l~~~la~~~----g~---~~~i~~~sGs~a-~~~~~~~~~-~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-- 215 (488)
...+|++.+|+++ |. ++.|++++|+.. ...++.+++ ++||.|+++.|+|+.+...++..|++++.++.+
T Consensus 108 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~ 187 (407)
T PLN02368 108 GLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEES 187 (407)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccc
Confidence 3468888888887 42 356777877664 466777776 799999999999999999999999999888642
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 216 -----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 216 -----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
|+++|++.+++...+ +...++++++.| .+++|.+.+ +++|+++|++||++||+||+|....++..
T Consensus 188 ~~~~~d~~~le~~i~~~~~~------~~~~k~l~l~nP-~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~ 260 (407)
T PLN02368 188 ENWGLDVNNLRQSVAQARSK------GITVRAMVIINP-GNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDE 260 (407)
T ss_pred cCCCCCHHHHHHHHHHHhhc------CCCeEEEEEECC-CCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 678888888642111 012455665555 888898775 78889999999999999999984444211
Q ss_pred CC--Ccchhc-CCCC----CCccEEEccccccc-CCcc---cEEE---eCHHHHHHHHhhCCCCcccCCCCHHHHHHHHH
Q 040324 288 GR--GVCELL-GVDT----SDVDIMMGTFSKSF-GSYG---GYIA---GSKELIQYLKYNCPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 288 g~--~~~~~~-~v~p----~~~di~~~t~sK~~-g~~G---g~i~---~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a 353 (488)
.. ...+.. ++.+ .+..|+++||||+| |.+| ||++ +++++++.+..... ... +.+.+.+.++.+
T Consensus 261 ~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~--~~~~~~Q~aa~~ 337 (407)
T PLN02368 261 RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IAL--SPNVSGQIFMGL 337 (407)
T ss_pred CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccC--CCCcHHHHHHHH
Confidence 11 111211 1211 23568889999998 7788 9998 48889888877532 222 256666666666
Q ss_pred HHHHHh-ccCC----CchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcchH
Q 040324 354 AIQVVI-GEDG----SCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPAKV 411 (488)
Q Consensus 354 ~L~~i~-~~~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~ 411 (488)
+|+--. ++.. .++.+++.+.++++++.+.+.|+++ |+.+..+.++.+++..+..+.++
T Consensus 338 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~lp~~~ 401 (407)
T PLN02368 338 MVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIKLPPKA 401 (407)
T ss_pred HhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCCCCHHH
Confidence 664100 0000 0122456788899999999999997 88887777776666555555544
No 287
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=6.7e-19 Score=177.14 Aligned_cols=210 Identities=14% Similarity=0.163 Sum_probs=160.1
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHh----cCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARG----SGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~----~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++.|.+.++++++|++|+..++.++.++||.|+++.+.|+++...+.. .|.++..++..|++++
T Consensus 60 ~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l 139 (388)
T PRK07811 60 NPTRTALEEQLAALEGGAYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAV 139 (388)
T ss_pred CccHHHHHHHHHHHhCCCceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHH
Confidence 355689999999999999999999999999888888899999999999999976544332 4777777777788988
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+.+ ++.+|+++.+.++.|.+.++++|+++|+++|+++|+||+|+.+... .. .+ .
T Consensus 140 ~~~i~~-------------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~---~p----~~---~ 196 (388)
T PRK07811 140 RAAITP-------------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQ---QP----LA---L 196 (388)
T ss_pred HHhcCc-------------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccC---Cc----hh---h
Confidence 887754 3346777888889999999999999999999999999999854332 11 11 2
Q ss_pred CccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
+.|+++.|++|.++++ ||++++ ++++.+.++..... .+...+|..+..++..|+.+ ..+.++..
T Consensus 197 gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~--~g~~~s~~~a~l~~~~L~tl---------~~R~~~~~ 265 (388)
T PRK07811 197 GADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNG--AGAVPGPFDAYLTLRGLKTL---------AVRMDRHS 265 (388)
T ss_pred CCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCcH---------HHHHHHHH
Confidence 3489999999999874 477776 46776666543321 23335666655555555543 56777788
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
++...+.+.|++.
T Consensus 266 ~na~~la~~L~~~ 278 (388)
T PRK07811 266 ENAEAVAEFLAGH 278 (388)
T ss_pred HHHHHHHHHHHhC
Confidence 8999999999875
No 288
>PLN02509 cystathionine beta-lyase
Probab=99.84 E-value=1.4e-18 Score=176.52 Aligned_cols=208 Identities=15% Similarity=0.190 Sum_probs=160.9
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCCCHHHHH
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHLE 221 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~d~~~Le 221 (488)
+..+.+++.+|++.+.+.++++++|.++... +..+.++||.|+++.+.|+.+.. .+...|..+..++.+|+++++
T Consensus 133 pt~~aLE~~lA~leg~e~ai~~~SG~aAi~~-il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~ 211 (464)
T PLN02509 133 PTRDALESLLAKLDKADRAFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVA 211 (464)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCcHHHHHHH-HHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHH
Confidence 5679999999999999999999999877643 34568999999999999998763 345678998888888888888
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCC
Q 040324 222 EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSD 301 (488)
Q Consensus 222 ~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~ 301 (488)
+.+.+ ++.+|+++.+.++.|.+.++++|+++|++||+++|+|++|+.+.++. . .+ .+
T Consensus 212 ~ai~~-------------~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~---p----l~---~g 268 (464)
T PLN02509 212 AAIGP-------------QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSR---P----LE---LG 268 (464)
T ss_pred HhCCc-------------CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCC---h----hh---cC
Confidence 77743 34577789999999999999999999999999999999997554432 1 11 23
Q ss_pred ccEEEcccccccCCc----ccEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 302 VDIMMGTFSKSFGSY----GGYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 302 ~di~~~t~sK~~g~~----Gg~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
.|+++.|++|.+++. ||+++.+ +.+.+.++..... .+..++|..++.++..|+.+ ..++++..+
T Consensus 269 aDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~--~g~~l~p~~A~l~lr~L~tL---------~~R~~r~~~ 337 (464)
T PLN02509 269 ADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNS--EGSGLAPFDCWLCLRGIKTM---------ALRIEKQQE 337 (464)
T ss_pred CcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHh--cCCCcCHHHHHHHHhhhhhH---------HHHHHHHHH
Confidence 489999999999763 4777754 4444444322221 23347888888888888876 568888899
Q ss_pred HHHHHHHHHHhC
Q 040324 377 NSNFFRSKLQKM 388 (488)
Q Consensus 377 ~~~~l~~~L~~~ 388 (488)
++.++.+.|++.
T Consensus 338 nA~~la~~L~~~ 349 (464)
T PLN02509 338 NARKIAMYLSSH 349 (464)
T ss_pred HHHHHHHHHhcC
Confidence 999999999875
No 289
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=9.5e-19 Score=176.11 Aligned_cols=284 Identities=17% Similarity=0.150 Sum_probs=192.3
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++.|.+.++++++|++|+..++.+++++||.|+++.+.|+.+.. .....|.++..++..+.+++
T Consensus 64 ~pt~~~Le~~lA~l~g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l 143 (394)
T PRK07050 64 TPTSLALAQRLAEIEGGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGI 143 (394)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHH
Confidence 45568999999999999999999999999988888889999999999999998764 34566888888876667777
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++|+.+.+-+ +.. .
T Consensus 144 ~~~i~~-------------~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~~---------~l~-~ 200 (394)
T PRK07050 144 ADLIQP-------------NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAFK---------PFE-H 200 (394)
T ss_pred HHhcCC-------------CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccccC---------HHH-c
Confidence 776643 23466778888888999999999999999999999999998543311 111 2
Q ss_pred CccEEEcccccccCCc----ccEEE-eCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIA-GSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~-~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
+.|+++.|++|.+++. ||+++ .++++.+.++..... .+.+.+|..+..++..|+. ...++++..
T Consensus 201 GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~--~G~~~~~~~a~l~lr~l~t---------l~~Rl~~~~ 269 (394)
T PRK07050 201 GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMR--LGIGVSADDCSLVLRGLPS---------LQVRLAAHD 269 (394)
T ss_pred CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHcCCCc---------HHHHHHHHH
Confidence 3489999999999642 46555 467887777654332 2334667655444444433 345777788
Q ss_pred HHHHHHHHHHHhC-CCe-ecC----------------CCCCCeEEEEeCC---cchHHHHHHHHHHCCceEEeecC----
Q 040324 376 ENSNFFRSKLQKM-GFE-VLG----------------DNDSPVMPIMVYN---PAKVSSFSRECLKQNVAIVTVGF---- 430 (488)
Q Consensus 376 ~~~~~l~~~L~~~-g~~-~~~----------------~~~~~~~~~~~~~---~~~~~~~~~~l~~~Gi~v~~~~~---- 430 (488)
+++..+.+.|++. ++. +.- ...+.++.+.+.. .....+|.+.|...++.+.-.+.
T Consensus 270 ~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~ 349 (394)
T PRK07050 270 RSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLA 349 (394)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceE
Confidence 8888888888765 111 110 1123456666643 24455777777665544331111
Q ss_pred -CC---------ccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 431 -PA---------TPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 431 -~~---------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
|. .+...+.+||++.+. |.|.+++-|+++++.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~iR~svGlE----~~~dl~~dl~~al~~ 391 (394)
T PRK07050 350 MPYDVASMRTAKWPHRGTLVRLYIGLE----DEADLIADLEQALEA 391 (394)
T ss_pred eeCcccccchhhcCCCCCEEEEEeCcC----CHHHHHHHHHHHHHH
Confidence 11 112236899999654 455555555555543
No 290
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2e-18 Score=172.45 Aligned_cols=209 Identities=14% Similarity=0.165 Sum_probs=163.6
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHHH
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~Le 221 (488)
+....||+++|++.+.+.+++++||++|+..++.++.++||.|++..+.|+.+... ....|.++..++..+.++++
T Consensus 61 pt~~~Le~~iA~le~~~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~ 140 (394)
T PRK09028 61 PTHFAFQAAIVELEGGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIR 140 (394)
T ss_pred chHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHH
Confidence 34579999999999888899999999999888888899999999999999777643 33457788777777777777
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCC
Q 040324 222 EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSD 301 (488)
Q Consensus 222 ~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~ 301 (488)
+.+.+ ++.+|+++.+.++.|.+.++++|+++|+++|+++++|++|+.+..- ..-..+
T Consensus 141 ~~l~~-------------~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~----------~Pl~~G 197 (394)
T PRK09028 141 ELIRP-------------NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINS----------RPFEMG 197 (394)
T ss_pred HhcCc-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccC----------CccccC
Confidence 76643 3447778899999999999999999999999999999999843211 111234
Q ss_pred ccEEEcccccccCCcc----cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 040324 302 VDIMMGTFSKSFGSYG----GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIREN 377 (488)
Q Consensus 302 ~di~~~t~sK~~g~~G----g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (488)
+|+++.|.+|.+++.+ |+++.+++..+.+..... ..+..++|..+..++..|+.+ .-+.++..++
T Consensus 198 aDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~--~~G~~~~p~~a~l~~rgl~TL---------~lR~~~~~~n 266 (394)
T PRK09028 198 VDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSY--LMGQCTSPDDVYLAMRGLRTL---------GVRLAQHEKN 266 (394)
T ss_pred ceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHH--hcCCCCCHHHHHHHHcccCcH---------HHHHHHHHHH
Confidence 6999999999998763 888878877666654322 234568888888777777655 5688888999
Q ss_pred HHHHHHHHHhC
Q 040324 378 SNFFRSKLQKM 388 (488)
Q Consensus 378 ~~~l~~~L~~~ 388 (488)
+..+.+.|++.
T Consensus 267 a~~la~~L~~~ 277 (394)
T PRK09028 267 ALKVANWLATR 277 (394)
T ss_pred HHHHHHHHhcC
Confidence 99999999876
No 291
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.83 E-value=2.5e-18 Score=186.62 Aligned_cols=300 Identities=16% Similarity=0.117 Sum_probs=210.1
Q ss_pred CCChhhHHHHHHHHHHHhCCCCeEEeCCcH----HHHhhhhhcccCC-Cc----EEEEeCCCchHHHHHHHhcCCeEEEe
Q 040324 142 GGTLALHNELEECVARFVGKPAAIVFGMGY----VTNSSILPVLMGK-GS----LIISDSLNHNSIVNGARGSGATIRVF 212 (488)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~~~i~~~sGs----~a~~~~~~~~~~~-~~----~Vl~~~~~h~~~~~~~~~~g~~v~~~ 212 (488)
.|+.+...++++.+++++|.+.+.+..+.+ +++..+++++.++ |+ +|+++...|++....+...|.+++.+
T Consensus 564 ~g~~~~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v 643 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVV 643 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEe
Confidence 366677789999999999996665555444 4667777777755 66 89999999999999998899999999
Q ss_pred eCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 213 QHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 213 ~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
+.+ |+++|+++++++ ..+.++|++....+.+|...|+++|.++|+++|+++++|.+|..+..+..
T Consensus 644 ~~d~~G~vDle~L~~~i~~~----------~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~ 713 (993)
T PLN02414 644 GTDAKGNINIEELRKAAEAH----------KDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLT 713 (993)
T ss_pred ccCCCCCcCHHHHHHHHhcc----------CCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcC
Confidence 864 899999999742 11456777777777788888999999999999999999999986443321
Q ss_pred CCCcchhcCCCCCCccEEEcccccccCC------cc-cEEEeCHHHHHHHHhhC------------CCCcccCC----CC
Q 040324 288 GRGVCELLGVDTSDVDIMMGTFSKSFGS------YG-GYIAGSKELIQYLKYNC------------PAHLYATS----IS 344 (488)
Q Consensus 288 g~~~~~~~~v~p~~~di~~~t~sK~~g~------~G-g~i~~~~~~~~~~~~~~------------~~~~~~~~----~~ 344 (488)
.....++|++.+|.+|+|++ +| |+++.+++++..+-... ..++.+.. ++
T Consensus 714 --------~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~ 785 (993)
T PLN02414 714 --------SPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGS 785 (993)
T ss_pred --------CccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhh
Confidence 11123468999999998752 33 88998887766553210 00011111 11
Q ss_pred HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC-CCCeE---EEEeC-C----cchHHHHH
Q 040324 345 PPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN-DSPVM---PIMVY-N----PAKVSSFS 415 (488)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~---~~~~~-~----~~~~~~~~ 415 (488)
...+..++.-++.+ +.+...+..++...+++|++++|++ ++++.-.. .++++ .+.+. . .....++.
T Consensus 786 al~l~~A~~yi~~l----G~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~ 860 (993)
T PLN02414 786 ALILPISYTYIAMM----GSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVA 860 (993)
T ss_pred HHHHHHHHHHHHHH----CHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHH
Confidence 12223333344433 4445666788889999999999977 33332211 12211 11121 1 13457899
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
++|++.||......|| ..+.+|++|+...|++|||++++++..+.++..
T Consensus 861 krL~d~Gihapt~~~p----v~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 861 KRLMDYGFHAPTMSWP----VPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred HHHHHcCcEEeeeccc----cCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999987654444 247899999999999999999999998887764
No 292
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=5.7e-18 Score=169.46 Aligned_cols=302 Identities=20% Similarity=0.219 Sum_probs=207.2
Q ss_pred cchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc-cCCCcEEEEeCCCchH
Q 040324 119 YCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHNS 197 (488)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~-~~~~~~Vl~~~~~h~~ 197 (488)
+..+++.+.++.. ..+ ...+...++|+++++++|.+.++.++||+.|...++.++ .++|+.|+++..++.+
T Consensus 6 e~~~~v~~~l~s~-~~~-------~~g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~ 77 (363)
T PF01041_consen 6 EEIDAVLEVLRSG-WLS-------TYGPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPA 77 (363)
T ss_dssp HHHHHHHHHHHHT-CCS-------SSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-TH
T ss_pred HHHHHHHHHHHhC-Ccc-------CCCHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchH
Confidence 4456777777663 111 124677999999999999999999999999998887776 4789999999999999
Q ss_pred HHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCc
Q 040324 198 IVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKA 271 (488)
Q Consensus 198 ~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~ 271 (488)
+..++...|++++.++.+ |++++++++.+ .+++++++ ..+ |..+++++|.++|+++|+
T Consensus 78 ~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~------------~t~ai~~~-h~~---G~~~d~~~i~~~~~~~~i 141 (363)
T PF01041_consen 78 TASAILWAGAEPVFVDIDPETLNIDPEALEKAITP------------KTKAILVV-HLF---GNPADMDAIRAIARKHGI 141 (363)
T ss_dssp HHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHT------------TEEEEEEE--GG---GB---HHHHHHHHHHTT-
T ss_pred HHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhcc------------CccEEEEe-cCC---CCcccHHHHHHHHHHcCC
Confidence 999999999999998754 89999999886 25555554 444 666799999999999999
Q ss_pred EEEEEccccccccCCCCCCcchhcCCCCCCccEEEccc--ccccCC-cccEEEeC-HHHHHHHHhhCC-C----------
Q 040324 272 YTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTF--SKSFGS-YGGYIAGS-KELIQYLKYNCP-A---------- 336 (488)
Q Consensus 272 ~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~--sK~~g~-~Gg~i~~~-~~~~~~~~~~~~-~---------- 336 (488)
+||.|.+|++|..- .|+.+.. +| |+.+.|| +|.+.. -||+++.+ +++.+.++.... +
T Consensus 142 ~lIeD~a~a~g~~~-~g~~~G~-~g------d~~~fSf~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 213 (363)
T PF01041_consen 142 PLIEDAAQAFGARY-KGRPVGS-FG------DIAIFSFHPTKIITTGEGGAVVTNDPELAERARALRNHGRSRDAFRRYR 213 (363)
T ss_dssp EEEEE-TTTTT-EE-TTEETTS-SS------SEEEEESSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEETSECSTTE
T ss_pred cEEEccccccCcee-CCEeccC-CC------CceEecCCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCcccccccc
Confidence 99999999976532 2322211 22 6667777 598854 35777775 677777665332 1
Q ss_pred ----CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-Cee-cCCCC-----CCeEEEEe
Q 040324 337 ----HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEV-LGDND-----SPVMPIMV 405 (488)
Q Consensus 337 ----~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~-~~~~~-----~~~~~~~~ 405 (488)
..+...+++..++.+++.|+.+ ++..++-+++.+++.+.|.... +.. ..+.. ...+++.+
T Consensus 214 ~~~~~g~n~rm~~~~AAigl~QL~~L---------~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~ 284 (363)
T PF01041_consen 214 HELPPGYNFRMSELQAAIGLAQLKRL---------DEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRL 284 (363)
T ss_dssp ESSSS--B-B-BHHHHHHHHHHHHTH---------HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEE
T ss_pred ccccCCcccccHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccc
Confidence 1223347888888888888865 5677777888999999998874 322 21111 24567777
Q ss_pred CCc--chHHHHHHHHHHCCceEEeecC-CCc--cC------------------CCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 406 YNP--AKVSSFSRECLKQNVAIVTVGF-PAT--PL------------------LLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 406 ~~~--~~~~~~~~~l~~~Gi~v~~~~~-~~~--~~------------------~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
... ....++.+.|.++||.+.+... |.. +. ....+.+-.+...|++|+++++++|+
T Consensus 285 ~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 285 PDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 654 2467899999999999986331 111 00 01346677778899999999999874
No 293
>PRK02769 histidine decarboxylase; Provisional
Probab=99.83 E-value=1.2e-17 Score=166.69 Aligned_cols=289 Identities=16% Similarity=0.115 Sum_probs=204.4
Q ss_pred ChhhHHHHHHHHHHHhCCC--C--eEEeCCcHHHHhhhhhcc--cCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--
Q 040324 144 TLALHNELEECVARFVGKP--A--AIVFGMGYVTNSSILPVL--MGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-- 215 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~--~--~i~~~sGs~a~~~~~~~~--~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-- 215 (488)
.....+++.+.+|+++|.+ + .+++++||++|..++... ..+++.|+++...|.+...+++..|.....++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~ 142 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPN 142 (380)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCC
Confidence 4456678888999999874 3 366777889986544332 2467899999999999999988888766666543
Q ss_pred ---CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcC---cEEEEEccccccccCCCCC
Q 040324 216 ---TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYK---AYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 216 ---d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g---~~li~DE~~s~g~~g~~g~ 289 (488)
|+++|++.|++. + ..+.+|++..+.++.|.+.|+++|.++|++|| +++++|.+|+.+.+... +
T Consensus 143 g~id~~~L~~~i~~~---~-------~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~-~ 211 (380)
T PRK02769 143 GEIDYDDLISKIKEN---K-------NQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFV-N 211 (380)
T ss_pred CcCcHHHHHHHHHhC---C-------CCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeeccc-C
Confidence 899999988763 1 13556667778888999999999999999998 69999999985433211 1
Q ss_pred CcchhcCCCCCCccEEEcccccccCC-cc-cEEEeCHHHHHHHHhhCC-----CCcccCCCCHHHHHHHHHHHHHHhccC
Q 040324 290 GVCELLGVDTSDVDIMMGTFSKSFGS-YG-GYIAGSKELIQYLKYNCP-----AHLYATSISPPAAEQIISAIQVVIGED 362 (488)
Q Consensus 290 ~~~~~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~~~~~~~~~~~~~~-----~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (488)
.. ..+++.. ++|.+..+.+|.+++ .| |+++.+++..+.+..... ..+...+-+....++..++|+.+
T Consensus 212 ~~-~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~l---- 285 (380)
T PRK02769 212 NP-PPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSL---- 285 (380)
T ss_pred cc-ccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHH----
Confidence 00 0133332 679999999999884 44 888888776665532111 11222233445566777888877
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEE
Q 040324 363 GSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARI 442 (488)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi 442 (488)
+....++..++..++++++.++|++.|+++..++.+.++.+. .+.. ++ . +|..+.+. .+.+|+
T Consensus 286 g~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~f~--~~~~--~~----~-~~w~l~~~--------~~~~hi 348 (380)
T PRK02769 286 GSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVVFP--CPSE--RI----W-KKWHLATS--------GNQAHI 348 (380)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEEEc--CCCH--HH----H-hCeeEccc--------CCEEEE
Confidence 333567888999999999999999999998877666655443 2221 22 1 56555521 147999
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHH
Q 040324 443 CISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 443 ~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
++...+|+|.+|.+++.|.+....
T Consensus 349 ~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 349 ITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred EECCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999887653
No 294
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=2e-18 Score=173.82 Aligned_cols=281 Identities=12% Similarity=0.199 Sum_probs=192.6
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++.|.+.+++++||+.|+..++. +.++||.|++..+.|+++.. .++..|.++..++..|++++
T Consensus 53 ~p~~~~le~~lA~l~g~~~~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 131 (390)
T PRK08064 53 NPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEV 131 (390)
T ss_pred ChhHHHHHHHHHHHhCCCCeEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHH
Confidence 45668999999999999899999999988866665 67889999999998886543 34457899999988888888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+.+ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++|+.+... . .+ ..
T Consensus 132 ~~~l~~-------------~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---~------~~-~~ 188 (390)
T PRK08064 132 AQNIKP-------------NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ---K------PL-DL 188 (390)
T ss_pred HHhcCC-------------CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc---C------ch-hh
Confidence 877753 3457777899999999999999999999999999999998743221 1 11 12
Q ss_pred CccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
++|+++.|++|.+++. +|+++. ++++++.++..... ++...+|..+..++..++. ...+.++..
T Consensus 189 g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~--~g~~~~~~~a~l~~~gl~t---------l~~R~~~~~ 257 (390)
T PRK08064 189 GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNS--FGAVLGVQDCWLVLRGLKT---------LHVRLEHSS 257 (390)
T ss_pred CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHcccCc---------HHHHHHHHH
Confidence 3589999999999752 366655 56788877765443 3334666655554444433 356777888
Q ss_pred HHHHHHHHHHHhCC---------Ce------ecC---CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEe--ec------
Q 040324 376 ENSNFFRSKLQKMG---------FE------VLG---DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVT--VG------ 429 (488)
Q Consensus 376 ~~~~~l~~~L~~~g---------~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~--~~------ 429 (488)
++...+.+.|++.+ ++ +.. ...+.++.+.+.... +..+.+-..++.... .|
T Consensus 258 ~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~---~~~~f~~~l~l~~~~~s~G~~~sl~ 334 (390)
T PRK08064 258 ETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEE---AVRQFVSHVKLPVFAVSLGAVESIL 334 (390)
T ss_pred HHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHH---HHHHHHHhCCcceEcccCCCCccee
Confidence 88888888888652 11 111 123457777775322 222223233553211 11
Q ss_pred -CCC------cc--------CCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 430 -FPA------TP--------LLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 430 -~~~------~~--------~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
+|. .+ ...+.+|+++.+..+++.++.+.++|+++
T Consensus 335 ~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 335 SYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 010 00 12478999998888888877777777653
No 295
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=2.6e-18 Score=172.19 Aligned_cols=283 Identities=14% Similarity=0.130 Sum_probs=197.1
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHHH
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~Le 221 (488)
+..++|++.++++.|.+.++++++|+.++..++. ++++||.|+++.+.|+++... +...|.++..++..|+++++
T Consensus 47 p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le 125 (378)
T TIGR01329 47 PTRTALESLLAKLDKADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVK 125 (378)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHH
Confidence 4568999999999999999999999987765555 679999999999999887543 34568999999888999998
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCC
Q 040324 222 EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSD 301 (488)
Q Consensus 222 ~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~ 301 (488)
+.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++|..+... . ..+ ..
T Consensus 126 ~~i~~-------------~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~---~-~l~------~g 182 (378)
T TIGR01329 126 AALGP-------------KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLC---N-PLE------LG 182 (378)
T ss_pred HhcCc-------------CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC---C-hhh------cC
Confidence 87753 3457778899999999999999999999999999999998633221 1 111 23
Q ss_pred ccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 302 VDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 302 ~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
.|+++.|++|.++++ ||+++. ++++.+.++..... .+...+|..+..++..|+ ....+.++..+
T Consensus 183 ~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~--~G~~~~~~~a~l~~~~l~---------tl~~R~e~~~~ 251 (378)
T TIGR01329 183 ADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNS--TGSGLAPFDCWLLLRGIK---------TLAIRIEKQQE 251 (378)
T ss_pred CcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHh--cCCcCCHHHHHHHHccCC---------CHHHHHHHHHH
Confidence 489999999999753 588766 45555666543321 233466766555444444 34667788888
Q ss_pred HHHHHHHHHHhCC---------Ce------ecC---CCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecC------CC
Q 040324 377 NSNFFRSKLQKMG---------FE------VLG---DNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGF------PA 432 (488)
Q Consensus 377 ~~~~l~~~L~~~g---------~~------~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~ 432 (488)
+...+.+.|++.. ++ +.. ...+.++.+.+.......+|++.|..-++.++-.+. |.
T Consensus 252 na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~ 331 (378)
T TIGR01329 252 NARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFGSVNSLISMPC 331 (378)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCCCCCceeeCCC
Confidence 8888888887641 11 100 123467777774434466888888544655543221 21
Q ss_pred c--------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 433 T--------------PLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 433 ~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
. ...++.+||++.+ ||.|.+++-|++++++.
T Consensus 332 ~~~~~~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 332 FMSHASIPAEVREERGLPEDLVRLSVGI----EDVDDLISDLDIAFVTA 376 (378)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHHhc
Confidence 1 0124689999854 46667777777776654
No 296
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=8.3e-18 Score=169.63 Aligned_cols=211 Identities=18% Similarity=0.190 Sum_probs=161.2
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~ 219 (488)
..+...+|++++|++.|.+.++++++|++++..++.++.++||.|++..+.|+.+... ....|.++..++..|+++
T Consensus 58 ~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 58 GNPTRDLLGEALAELEGGAGGVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred CChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 4455689999999999998999999999888888888899999999999999874432 344577788888778888
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+++ ++.+|+++...++.|.+.++++|.++|+++|+++|+||+|..+..- + ..+
T Consensus 138 l~~~i~~-------------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~---~-pl~------ 194 (405)
T PRK08776 138 LADALAQ-------------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ---K-PLE------ 194 (405)
T ss_pred HHHhcCc-------------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC---C-ccc------
Confidence 8887753 2345667788889999999999999999999999999999743211 1 111
Q ss_pred CCccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (488)
.+.|+++.|.+|.+++. ||+++. ++++.+.+...... .+..++|..+..++..++.+ +.+.++.
T Consensus 195 ~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~--~g~~~s~~~a~l~~~gl~tl---------~~r~~~~ 263 (405)
T PRK08776 195 FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANA--LGLTGSPFDAFLTLRGLRTL---------DARLRVH 263 (405)
T ss_pred ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhCcH---------HHHHHHH
Confidence 23489999999999764 377665 57777766543332 22337788877777666644 6788888
Q ss_pred HHHHHHHHHHHHhC
Q 040324 375 RENSNFFRSKLQKM 388 (488)
Q Consensus 375 ~~~~~~l~~~L~~~ 388 (488)
.++...+.+.|++.
T Consensus 264 ~~na~~la~~L~~~ 277 (405)
T PRK08776 264 QENADAIAALLDGH 277 (405)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999865
No 297
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=3e-18 Score=170.69 Aligned_cols=210 Identities=14% Similarity=0.188 Sum_probs=168.4
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~~~d~~~L 220 (488)
.|-...||++||++-|.+.+++++||+.|+.+++.++.++||.|+++...|+.+...+ +..|.++..++..|.+++
T Consensus 61 nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 61 TLTHFSLQEAMCELEGGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 4566899999999999999999999999998888888999999999988888877554 446889999988899998
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcC--cEEEEEccccccccCCCCCCcchhcCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYK--AYTYLDEAHSIGAVGKTGRGVCELLGVD 298 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g--~~li~DE~~s~g~~g~~g~~~~~~~~v~ 298 (488)
+++|++ ++.+|.+|.+.++.|.+.|+++|+++|+++| +++++|.+++.+.+ +...
T Consensus 141 ~~~l~~-------------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~----------~~pl 197 (395)
T PRK08114 141 AKLIQP-------------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL----------FKAL 197 (395)
T ss_pred HHhcCC-------------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc----------cCHH
Confidence 888754 3468889999999999999999999999984 99999999984322 2222
Q ss_pred CCCccEEEcccccccCCcc----cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 040324 299 TSDVDIMMGTFSKSFGSYG----GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374 (488)
Q Consensus 299 p~~~di~~~t~sK~~g~~G----g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (488)
..++|+++.|.+|.+++.+ |+++.+++..+.++.... ..+..++|..+...+..|+.+ .-+.++.
T Consensus 198 ~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~--~~G~~~~p~~a~l~~rgl~TL---------~lR~~~~ 266 (395)
T PRK08114 198 DFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSY--LMGQMVDADTAYMTSRGLRTL---------GVRLRQH 266 (395)
T ss_pred HcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHH--hccCCCCHHHHHHHHcCCCcH---------HHHHHHH
Confidence 3456999999999997753 877878877665654322 245568888877776666654 5678888
Q ss_pred HHHHHHHHHHHHhC
Q 040324 375 RENSNFFRSKLQKM 388 (488)
Q Consensus 375 ~~~~~~l~~~L~~~ 388 (488)
.+++..+.+.|++.
T Consensus 267 ~~na~~va~~L~~h 280 (395)
T PRK08114 267 EESSLKVAEWLAEH 280 (395)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999875
No 298
>PLN03032 serine decarboxylase; Provisional
Probab=99.83 E-value=1.1e-17 Score=165.59 Aligned_cols=312 Identities=14% Similarity=0.056 Sum_probs=208.2
Q ss_pred ccchHHHHHHHHH-cCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--Ce--EEeCCcHHHHhhhhhccc--CCCcEEEE
Q 040324 118 EYCTPRVIDSLKK-YSHSTCSSRVDGGTLALHNELEECVARFVGKP--AA--IVFGMGYVTNSSILPVLM--GKGSLIIS 190 (488)
Q Consensus 118 ~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~--i~~~sGs~a~~~~~~~~~--~~~~~Vl~ 190 (488)
+...+++.+.+.+ +|.....+..........+++.+.+++++|.+ +. +++++||++|..++.... .++..|++
T Consensus 37 ~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~ 116 (374)
T PLN03032 37 YGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYA 116 (374)
T ss_pred hHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEe
Confidence 3446666665543 22222111111124566688889999999874 33 788889999966554432 24468999
Q ss_pred eCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHH
Q 040324 191 DSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITI 265 (488)
Q Consensus 191 ~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l 265 (488)
+...|.++..+++..+..+..++.+ |+++|++.|++.. ..+.+|++....++.|.+.|+++|.++
T Consensus 117 s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~----------~~~~lvv~tagtt~tG~idpi~eI~~i 186 (374)
T PLN03032 117 SRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNR----------DKPAILNVNIGTTVKGAVDDLDRILRI 186 (374)
T ss_pred CCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcC----------CCCEEEEEEecCcCCccCCCHHHHHHH
Confidence 9999999999999988877666644 8999999997521 123455555667788999999999999
Q ss_pred HHHcC-----cEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC-Ccc-cEEEeCHHHHHHHHhhCC---
Q 040324 266 CKRYK-----AYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-SYG-GYIAGSKELIQYLKYNCP--- 335 (488)
Q Consensus 266 ~~~~g-----~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-~~G-g~i~~~~~~~~~~~~~~~--- 335 (488)
|++|| +++++|.+++.+....... ...++.. ..+|.+..+.+|.+| ..| |+++.+++..+.+.....
T Consensus 187 ~~~~g~~~~~~~lHvDaA~gg~~~p~~~~--~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~ 263 (374)
T PLN03032 187 LKELGYTEDRFYIHCDGALFGLMMPFVSR--APEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLN 263 (374)
T ss_pred HHHhCCCCCCeeEEEEccchhhhhhccCC--CcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccC
Confidence 99996 5999999998443321111 0112222 247888899999988 445 888888776655532111
Q ss_pred --CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHH
Q 040324 336 --AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSS 413 (488)
Q Consensus 336 --~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (488)
..+...+-+....+..+++|+.+ +.+...+..++..++++++.+.|++.++++...+.+..+. +..+...
T Consensus 264 ~~d~ti~gSR~g~~~l~~w~~l~~~----G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p~~~~V~--f~~~~~~-- 335 (374)
T PLN03032 264 SRDATIMGSRNGHAPLYLWYTLRRK----GYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNELSSTVV--FERPMDE-- 335 (374)
T ss_pred CCCCcccCCCchHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECCCceEEE--EcCCCcH--
Confidence 11222222334556677777776 4456778899999999999999999998876665555433 3333211
Q ss_pred HHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 414 FSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.+.+|..+.. . .+.+|+++...+|++.+|++++.|++
T Consensus 336 ----~~~~~w~l~~-----~---~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 336 ----AFIKKWQLAC-----E---GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ----hHhheeeecc-----c---CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 1235655542 1 14799999888999999999998865
No 299
>PRK07049 methionine gamma-lyase; Validated
Probab=99.82 E-value=1e-17 Score=170.16 Aligned_cols=215 Identities=14% Similarity=0.182 Sum_probs=166.2
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEee-CCCHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQ-HNTPSH 219 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~-~~d~~~ 219 (488)
.+....|++.||++.+.++++++++|++|+..++.+++++||.|+++.+.|+.+...+ ...|.+++.++ ..|.++
T Consensus 82 ~Pt~~~Le~~lA~leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~ 161 (427)
T PRK07049 82 HPNSEIVEDRLAVYEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAA 161 (427)
T ss_pred CcCHHHHHHHHHHHhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHH
Confidence 3445899999999999999999999999988888899999999999999999886553 45688766665 347888
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHH------cCcEEEEEccccccccCCCCCCcch
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKR------YKAYTYLDEAHSIGAVGKTGRGVCE 293 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~------~g~~li~DE~~s~g~~g~~g~~~~~ 293 (488)
+++.+.+.+.. + +..+|++++..+++|.+.+++++.+++++ +++++|+||++. ..-. ..
T Consensus 162 l~~~l~~~~~~-------~-~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~--~~~~--~~--- 226 (427)
T PRK07049 162 IGAAAEAAAAK-------G-RVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLL--GPVF--QK--- 226 (427)
T ss_pred HHHHHHhhccC-------C-CceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcc--cccc--CC---
Confidence 88877653221 1 34467778999999999999999999988 899999999975 2110 00
Q ss_pred hcCCCCCCccEEEcccccccCC-cc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHH
Q 040324 294 LLGVDTSDVDIMMGTFSKSFGS-YG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQ 369 (488)
Q Consensus 294 ~~~v~p~~~di~~~t~sK~~g~-~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (488)
.+. .+.|+++.|+||.+|+ +| ||+++++++++.+...... ++.+.+|..+.+++..|+.+ ..
T Consensus 227 --pl~-~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~--~g~~ls~~~a~l~~r~L~tl---------~~ 292 (427)
T PRK07049 227 --PLE-HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSA--IGTQLDPHSCWMLGRSLETL---------VL 292 (427)
T ss_pred --ccc-cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHh--cCCCCCHHHHHHHHcCCChH---------HH
Confidence 111 2358999999999985 44 9999999998888765443 34558888888777777654 55
Q ss_pred HHHHHHHHHHHHHHHHHhC
Q 040324 370 KLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~~ 388 (488)
++++..+++..+.+.|++.
T Consensus 293 R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 293 RMERANRNARAVAEFLRDH 311 (427)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 6777788999999999876
No 300
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.82 E-value=7.7e-18 Score=160.93 Aligned_cols=313 Identities=16% Similarity=0.138 Sum_probs=218.4
Q ss_pred HHHHHHHHHHhC-C-------CCeEEeCCcHH-HHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----
Q 040324 149 NELEECVARFVG-K-------PAAIVFGMGYV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---- 215 (488)
Q Consensus 149 ~~l~~~la~~~g-~-------~~~i~~~sGs~-a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~---- 215 (488)
.+|...+.++.+ . +-.+++|+|+. +....++.++++++.|+++...|.+....++..|+++++++.+
T Consensus 103 peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi 182 (472)
T KOG0634|consen 103 PELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGI 182 (472)
T ss_pred HHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCC
Confidence 566666666555 1 23566676655 4578899999999999999999999999999999999999876
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHHHHHcCcEEEEEccccccccCC-CCC--
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITICKRYKAYTYLDEAHSIGAVGK-TGR-- 289 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l~~~~g~~li~DE~~s~g~~g~-~g~-- 289 (488)
+++.|++++......- -..|..+++..+..-++++|.... -++|.+||+||++++|.||.|-+.-+.. .+.
T Consensus 183 ~pE~l~~il~~w~~~~---~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~ 259 (472)
T KOG0634|consen 183 DPESLEEILSNWKPGS---YKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLE 259 (472)
T ss_pred CHHHHHHHHhcCCccc---ccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCcc
Confidence 7999999998743210 011346677778888889997665 6799999999999999999998766652 010
Q ss_pred ---C-----------cchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHH
Q 040324 290 ---G-----------VCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIIS 353 (488)
Q Consensus 290 ---~-----------~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a 353 (488)
. +....+.+-++..|-+.||||.++.+- ||+.+++..++.+-..+...+.+ .+........+
T Consensus 260 ~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~--pSg~sq~iv~a 337 (472)
T KOG0634|consen 260 LESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSG--PSGFSQGIVYA 337 (472)
T ss_pred ccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecC--cccccHHHHHH
Confidence 0 112334555667788899999997533 99999998888776655433332 22333333334
Q ss_pred HHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC---C-CeecCCCCCCeEEEEeC-------Ccch-HHH-HHHHHHH
Q 040324 354 AIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM---G-FEVLGDNDSPVMPIMVY-------NPAK-VSS-FSRECLK 420 (488)
Q Consensus 354 ~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-~~~~~~~~~~~~~~~~~-------~~~~-~~~-~~~~l~~ 420 (488)
.|+..-.+...++..+++..+..+.+.+.+.|.+- + +++..+.++.++|+.+. .... ..+ +...+.+
T Consensus 338 ~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk 417 (472)
T KOG0634|consen 338 MLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVK 417 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHH
Confidence 44433111112356677777888888888888774 4 56777888888999885 2222 333 4445667
Q ss_pred CCceEEeec-CCCccC--CCC-eEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 421 QNVAIVTVG-FPATPL--LLA-RARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 421 ~Gi~v~~~~-~~~~~~--~~~-~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+||.+++.. |...|. ... ++|++++ ....|+++++++++..++++.
T Consensus 418 ~gV~~v~G~~F~v~p~~s~~kiffRls~a-~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 418 NGVKLVCGSWFMVDPESSWSKIFFRLSIA-FAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred CCeEEecCceeEEcCccCCCcceEEEEee-cCCHHHHHHHHHHHHHHHHHH
Confidence 799998622 222211 123 8999995 467889999999999998875
No 301
>PRK05939 hypothetical protein; Provisional
Probab=99.82 E-value=5.7e-18 Score=170.38 Aligned_cols=211 Identities=16% Similarity=0.253 Sum_probs=156.6
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHH---HHHHhcCCeEEEeeCCCHHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIV---NGARGSGATIRVFQHNTPSHLE 221 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~---~~~~~~g~~v~~~~~~d~~~Le 221 (488)
.+...+||+.+|++.|.+.+++++||..|+..++.++.++||.|++..+.|+++. ..+...|.++..++..|+++++
T Consensus 46 ~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~d~e~l~ 125 (397)
T PRK05939 46 TPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDATDVQNVA 125 (397)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCCCHHHHH
Confidence 4667899999999999999999999999988888888999999999998887543 3456679999999888999998
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCC
Q 040324 222 EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSD 301 (488)
Q Consensus 222 ~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~ 301 (488)
+.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++|+.+.. ++....+
T Consensus 126 ~~l~~-------------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----------~~~~~~g 182 (397)
T PRK05939 126 AAIRP-------------NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----------FRPKDVG 182 (397)
T ss_pred HhCCC-------------CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----------cCccccC
Confidence 88753 344677789999999999999999999999999999999963211 1111234
Q ss_pred ccEEEcccccccCCcc----cEEEeCHH--------HH-------------HHHHhhCCCCcccCCCCHHHHHHHHHHHH
Q 040324 302 VDIMMGTFSKSFGSYG----GYIAGSKE--------LI-------------QYLKYNCPAHLYATSISPPAAEQIISAIQ 356 (488)
Q Consensus 302 ~di~~~t~sK~~g~~G----g~i~~~~~--------~~-------------~~~~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (488)
.|+++.|++|.+++.| |+++.+.. +. ..++.... ...+..++|..+...+..|+
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~p~~a~l~~rgl~ 261 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGL-RDMGATLSSEAAHRIAIGAE 261 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHH-HhcCCCCCHHHHHHHHcCcC
Confidence 6999999999998755 43432221 11 11111100 12344577776666665555
Q ss_pred HHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
.+ ..+.++..+++..+.+.|++.
T Consensus 262 tl---------~~R~~~~~~na~~la~~L~~~ 284 (397)
T PRK05939 262 TL---------ALRVDRSCSNALALAQFLEAH 284 (397)
T ss_pred cH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 44 567777788888899988865
No 302
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1e-17 Score=169.91 Aligned_cols=210 Identities=20% Similarity=0.255 Sum_probs=158.3
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHh----cCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARG----SGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~----~g~~v~~~~~~d~~~L 220 (488)
.+...+|+++||++.|.+.+++++||++|+..++.++.++||.|+++.+.|+.+...+.. .|..+..++.+|++++
T Consensus 57 ~pt~~~Le~~lA~l~g~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l 136 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL 136 (425)
T ss_pred CchHHHHHHHHHHHhCCCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence 345589999999999999999999999999888888899999999998888865544332 4667777777899999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ +..+|+++++.++.|.+.++++|.++|+++|+++|+|++|+.+... + . . ..
T Consensus 137 e~ai~~-------------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~---~-p---~---~~ 193 (425)
T PRK06084 137 EALIDE-------------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC---R-P---F---EH 193 (425)
T ss_pred HHHhcc-------------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC---C-h---h---hc
Confidence 988864 2346667899999999999999999999999999999999843322 1 1 1 13
Q ss_pred CccEEEcccccccCCcc----cEEEeCHHHH--H----------------------------HH---H-hhCCCCcccCC
Q 040324 301 DVDIMMGTFSKSFGSYG----GYIAGSKELI--Q----------------------------YL---K-YNCPAHLYATS 342 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~G----g~i~~~~~~~--~----------------------------~~---~-~~~~~~~~~~~ 342 (488)
+.|+++.|++|.+|+.| |+++.++... + .. + .... ..+..
T Consensus 194 gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~g~~ 271 (425)
T PRK06084 194 GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLR--NMGAA 271 (425)
T ss_pred CCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHH--hcCCC
Confidence 45899999999998643 6666532210 0 00 0 0011 23455
Q ss_pred CCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 343 ISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
++|..++.++..|+.+ ..+.++..+++..+.+.|++.
T Consensus 272 l~~~~a~l~lrgl~tl---------~~R~~~~~~na~~la~~L~~~ 308 (425)
T PRK06084 272 LSPFNAFLILQGLETL---------ALRMERHTENALKVARYLQQH 308 (425)
T ss_pred CCHHHHHHHHcCcCcH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 8888888777777755 678888899999999999876
No 303
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.3e-17 Score=166.77 Aligned_cols=210 Identities=14% Similarity=0.162 Sum_probs=162.2
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~~~d~~~L 220 (488)
.+-...|++++|++.|.+.++++++|++++..++.++.++||.|+++.+.|+.....+ ...|.++..++..|++++
T Consensus 52 npt~~~Le~~lA~leg~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l 131 (388)
T PRK08861 52 NPNRGLLEQTLSELESGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAAL 131 (388)
T ss_pred CchHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHH
Confidence 3556899999999999989999999999998888888899999999999998765432 234677777777788888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+.+ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+||+|..+.+.. .++ .
T Consensus 132 ~~~i~~-------------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~---------pl~-~ 188 (388)
T PRK08861 132 DAALAK-------------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQK---------PLE-L 188 (388)
T ss_pred HHhcCc-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCC---------Ccc-c
Confidence 877753 33467777889999999999999999999999999999998543321 111 2
Q ss_pred CccEEEcccccccCCc----ccEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
+.|+++.|++|.+++. ||+++++ +++.+.++.... ..+..++|..+...+..|+.+ .-+.++..
T Consensus 189 GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~--~~G~~~~p~~a~l~~rgl~Tl---------~lR~~~~~ 257 (388)
T PRK08861 189 GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGN--CIGATGTPFDSYMTLRGIRTL---------GARMRVHE 257 (388)
T ss_pred CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHh--ccCCCCChHHHHHHHhcCCCH---------HHHHHHHH
Confidence 4589999999999863 4877764 566666654433 234558888877777766654 56778888
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
+++..+.+.|++.
T Consensus 258 ~~a~~~a~~L~~~ 270 (388)
T PRK08861 258 ESAQQILAYLQTQ 270 (388)
T ss_pred HHHHHHHHHHHhC
Confidence 8888999988875
No 304
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.7e-17 Score=166.46 Aligned_cols=210 Identities=12% Similarity=0.167 Sum_probs=159.2
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHH----hcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~----~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++.|.+.++++++|++++..++.++.++||.|+++.+.|+++...+. ..+.++..++..|++++
T Consensus 51 ~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l 130 (386)
T PRK08045 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQAL 130 (386)
T ss_pred CccHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHH
Confidence 35568999999999998889999999988888888889999999999999987543322 23346666666678888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ +..+|+++.+.++.|.+.++++|.++|+++|+++|+||+|..+... + . .. .
T Consensus 131 ~~~l~~-------------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~---~-p---l~---~ 187 (386)
T PRK08045 131 RAALAE-------------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ---N-P---LA---L 187 (386)
T ss_pred HHhccc-------------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC---C-c---hh---h
Confidence 877753 2346667899999999999999999999999999999999743221 1 1 11 2
Q ss_pred CccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
..|+++.|++|.+++. +|+++. ++++.+.++..... .+..++|..+..++..|+.+ ..++++..
T Consensus 188 gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~--~g~~~~p~~~~l~~rgl~tl---------~~R~~~~~ 256 (386)
T PRK08045 188 GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANN--IGVTGGAFDSYLLLRGLRTL---------VPRMELAQ 256 (386)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHh--cCCCCCHHHHHHHHhhhccH---------HHHHHHHH
Confidence 3489999999999752 376655 57777777644332 33448888888777777754 66788889
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
+++..+.+.|++.
T Consensus 257 ~na~~la~~L~~~ 269 (386)
T PRK08045 257 RNAQAIVKYLQTQ 269 (386)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999875
No 305
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=9.3e-18 Score=170.05 Aligned_cols=285 Identities=15% Similarity=0.146 Sum_probs=189.5
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEee-CCCHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQ-HNTPSH 219 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~-~~d~~~ 219 (488)
.+....|++.+|++.|.+.+++++||+.|+..++.++..+|+.|+++...|+.+...+ ...|.++..++ ..|+++
T Consensus 68 ~p~~~~Le~~lA~l~g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred CchHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 4556899999999999999999999999998888888999999999988888766432 33567777764 346777
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+++ ++.+|++|.+.++.|.+.++++|.++|+++|+++|+|++|+.+.+. + .+ .
T Consensus 148 l~~ai~~-------------~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~---~------pl-~ 204 (436)
T PRK07812 148 WRAAVRP-------------NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLI---R------PL-E 204 (436)
T ss_pred HHHhCCC-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC---C------ch-h
Confidence 7766543 3457889999999999999999999999999999999999743221 1 11 1
Q ss_pred CCccEEEcccccccCCcc----cEEEeCHH------------------------------HHHHHH-hhCCCCcccCCCC
Q 040324 300 SDVDIMMGTFSKSFGSYG----GYIAGSKE------------------------------LIQYLK-YNCPAHLYATSIS 344 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~G----g~i~~~~~------------------------------~~~~~~-~~~~~~~~~~~~~ 344 (488)
.++|+++.|++|.+|+.| |.++.+.. .+...+ .... ..+..++
T Consensus 205 ~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~G~~l~ 282 (436)
T PRK07812 205 HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLR--DLGSAIS 282 (436)
T ss_pred cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHH--hcCCCCC
Confidence 346899999999998765 54443221 010111 0111 2345588
Q ss_pred HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-C-eecC-----------------CCCCCeEEEEe
Q 040324 345 PPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-F-EVLG-----------------DNDSPVMPIMV 405 (488)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~-----------------~~~~~~~~~~~ 405 (488)
|..+..++..|+.+ ..+.++..+++..+.+.|++.. + .+.- ...+.++.+.+
T Consensus 283 p~~a~l~~rgl~tL---------~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l 353 (436)
T PRK07812 283 PFNAFLIAQGLETL---------SLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFEL 353 (436)
T ss_pred HHHHHHHhcCcCcH---------HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEe
Confidence 88777766666654 6788888999999999998762 1 1111 11245677776
Q ss_pred CCc-chHHHHHHHHHHCCceEEe------ecCCCc--------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 406 YNP-AKVSSFSRECLKQNVAIVT------VGFPAT--------------PLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 406 ~~~-~~~~~~~~~l~~~Gi~v~~------~~~~~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
... ..+.+|.+.|.--.+.+.- +.+|.. ...++.+||++.+ ||.|.+++-|++++
T Consensus 354 ~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvGl----Ed~~dli~dl~~Al 429 (436)
T PRK07812 354 AGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVGI----EGIDDILADLEAGF 429 (436)
T ss_pred cCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHH
Confidence 432 3344555554321111100 111111 1124689999854 46666777777776
Q ss_pred HHh
Q 040324 465 DLV 467 (488)
Q Consensus 465 ~~~ 467 (488)
+..
T Consensus 430 ~~~ 432 (436)
T PRK07812 430 AAA 432 (436)
T ss_pred Hhh
Confidence 654
No 306
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=1.3e-17 Score=166.35 Aligned_cols=211 Identities=13% Similarity=0.115 Sum_probs=163.5
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~~~d~~~ 219 (488)
..+..+.|++.++.+-+.+.+++++||++|+..++.++.++||.|++..+.|+++.. .++..|.++..++..+.+.
T Consensus 62 gnPt~~~Le~~la~le~~~~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~ 141 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAG 141 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHH
Confidence 456668999999998888889999999999988888889999999999999998764 3456788888887666677
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+++ ++.+|++|.+.++.+.+.++++|+++|+++|+++++|++++...+- ..-.
T Consensus 142 l~~al~~-------------~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~----------~pl~ 198 (395)
T PRK05967 142 IAKLMRP-------------NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF----------RPLD 198 (395)
T ss_pred HHHhcCc-------------CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec----------ChhH
Confidence 7776653 3447778888888889999999999999999999999999733221 1111
Q ss_pred CCccEEEcccccccCCcc----cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSYG----GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~G----g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
.++|+++.|.+|.+++-+ |+++.+++..+.+..... ..+..++|..+...+..|+.+ .-+.++..
T Consensus 199 ~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~--~~G~~~~p~da~l~~rgl~Tl---------~lR~~~~~ 267 (395)
T PRK05967 199 FGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHG--TLGLCAGPDDTYQILRGLRTM---------GIRLEHHR 267 (395)
T ss_pred cCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHH--HcCCCCCHHHHHHHHcCcccH---------HHHHHHHH
Confidence 345899999999997633 778888876665543322 245568888877777777655 56778888
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
+++..+.+.|++.
T Consensus 268 ~na~~lA~~L~~h 280 (395)
T PRK05967 268 KSALEIARWLEGR 280 (395)
T ss_pred HHHHHHHHHHHhC
Confidence 8888888888875
No 307
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=2.4e-17 Score=156.57 Aligned_cols=337 Identities=18% Similarity=0.232 Sum_probs=222.9
Q ss_pred ceeEEe-ccccccCCCCCCccchHHHHHHH-HHcCCCCCCcccCCCChhhHHHHH----HHHHHHhCCC-CeEEeCCcHH
Q 040324 100 SRCLNL-GSYNYLGFAAADEYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNELE----ECVARFVGKP-AAIVFGMGYV 172 (488)
Q Consensus 100 ~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~-~~i~~~sGs~ 172 (488)
++.|++ +|-|+. .+.+.+|.-..+ .+|..++.+-|++.|. +..+++| ++..+++|.+ ..+-..||+.
T Consensus 26 ~~~ieLIASEN~~-----S~aV~~A~gS~ltnKYAEGyPgkRyYgGc-e~VD~vE~laierak~LFga~~anVQPhSGs~ 99 (413)
T COG0112 26 REHIELIASENFT-----SPAVMEAQGSDLTNKYAEGYPGKRYYGGC-EYVDEVEELAIERAKKLFGAEYANVQPHSGSQ 99 (413)
T ss_pred hhceeeeeccccC-----CHHHHHHHhhhhhhccccCCCCccccCCC-eeHHHHHHHHHHHHHHHhCCCccccCCCCchH
Confidence 345666 554542 356777766665 5688888888866553 4443333 3344577877 4677789999
Q ss_pred HHhhhhhcccCCCcEEEEeCCCchHHHH---HHHhcCCe--EEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 173 TNSSILPVLMGKGSLIISDSLNHNSIVN---GARGSGAT--IRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 173 a~~~~~~~~~~~~~~Vl~~~~~h~~~~~---~~~~~g~~--v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
||.++..++.+|||.|+--+..|+.... .+..+|.. ++.++.+ |.|++++...+. +.+
T Consensus 100 AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~-----------kPK 168 (413)
T COG0112 100 ANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEV-----------KPK 168 (413)
T ss_pred HHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHh-----------CCC
Confidence 9999999999999999987776665432 22333433 2333322 899999988874 234
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cccEE
Q 040324 242 IMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YGGYI 320 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~Gg~i 320 (488)
.+|.-.+.|+.. .++++++++|++-|++|++|-+|-.|-.. .|.. -+-- ...|++.+|.+|+|.+ -||.|
T Consensus 169 ~ii~G~SaY~r~---id~~~~reIad~VGA~L~~DmAHiaGLVA-~G~~----p~P~-~~AdvVTtTTHKTlrGPrGG~I 239 (413)
T COG0112 169 LIIAGGSAYSRP---IDFKRFREIADEVGAYLMVDMAHVAGLIA-GGVH----PNPL-PHADVVTTTTHKTLRGPRGGII 239 (413)
T ss_pred EEEECccccccc---cCHHHHHHHHHHhCceEEehHHHHHHHHh-cccC----CCCC-CccceEeCCcccCCCCCCceEE
Confidence 444445677653 58999999999999999999999654332 2211 1111 2269999999999954 57999
Q ss_pred EeCH-HHHHHHHhhCCCCcccCCCCH-HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CC
Q 040324 321 AGSK-ELIQYLKYNCPAHLYATSISP-PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD-ND 397 (488)
Q Consensus 321 ~~~~-~~~~~~~~~~~~~~~~~~~~p-~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~ 397 (488)
.+++ ++.+.++..-.+...+ ++- ...|+---+++.. .....++..+++.+|++.|.+.|.+.|+.++.. .+
T Consensus 240 l~~~eel~kkin~aVFPg~qg--gpl~HviAakaVa~~Ea----l~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTd 313 (413)
T COG0112 240 LTNDEELAKKINSAVFPGLQG--GPLMHVIAAKAVAFKEA----LEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTD 313 (413)
T ss_pred EeccHHHHHHhhhhcCCccCC--ChHHHHHHHHHHHHHHH----cChhHHHHHHHHHHHHHHHHHHHHHcCCeEecCCcc
Confidence 8884 8888887644433333 222 2222222233332 334668899999999999999999999988653 24
Q ss_pred CCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCc---cCCCCeEEEeecCCC----CHHHHHHHHHHHHHHHHHhC
Q 040324 398 SPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPAT---PLLLARARICISASH----TKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~---~~~~~~iRi~~~~~~----t~edid~~l~~l~~~~~~~~ 468 (488)
++++.+.+........-+..++++ ||.+..-.-|.. |...+-|||..+... .++|++++.+.|.+++....
T Consensus 314 nHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~~ 392 (413)
T COG0112 314 NHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGLK 392 (413)
T ss_pred ceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhccc
Confidence 477777776332233444445555 999876333332 444577999876554 46899999999999887644
No 308
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.81 E-value=6.2e-17 Score=164.82 Aligned_cols=286 Identities=17% Similarity=0.197 Sum_probs=194.6
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcc---------cCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVL---------MGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN- 215 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~---------~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~- 215 (488)
+...++++++|++++.+.+++++||++++..++.++ .++|+.|+++.++|.++...+...|++++.++.+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~ 142 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL 142 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC
Confidence 346899999999999999999999999997766654 4789999999999999999999999998887643
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCC
Q 040324 216 -----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG 290 (488)
Q Consensus 216 -----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~ 290 (488)
|++++++.+.+ .+++++++ ++ .|...++++|+++|++||++||+|++|++|..- .|+.
T Consensus 143 ~~~~id~~~le~~i~~------------~tkaVi~~-~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~-~g~~ 205 (438)
T PRK15407 143 PTYNIDASLLEAAVSP------------KTKAIMIA-HT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTY-DGRM 205 (438)
T ss_pred CcCCcCHHHHHHHcCc------------CCeEEEEe-CC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhc-CCee
Confidence 67778777643 24444444 33 356678999999999999999999999976542 2332
Q ss_pred cchhcCCCCCCccEEEcccc--cccCC-cccEEEeC-HHHHHHHHhh---CCC---------------------------
Q 040324 291 VCELLGVDTSDVDIMMGTFS--KSFGS-YGGYIAGS-KELIQYLKYN---CPA--------------------------- 336 (488)
Q Consensus 291 ~~~~~~v~p~~~di~~~t~s--K~~g~-~Gg~i~~~-~~~~~~~~~~---~~~--------------------------- 336 (488)
+.. +| |+.+.||. |.+.. .||+++.+ +++.+.++.. ...
T Consensus 206 ~G~-~g------d~~~fSf~~~k~~~~geGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (438)
T PRK15407 206 TGT-FG------DIATLSFYPAHHITMGEGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYD 278 (438)
T ss_pred eec-cC------ceEEEeCCCCCCccccCceEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccc
Confidence 221 22 45555664 66643 45777765 4554443321 100
Q ss_pred -------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC--CeecC-CCCC----CeEE
Q 040324 337 -------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG--FEVLG-DNDS----PVMP 402 (488)
Q Consensus 337 -------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~~-~~~~----~~~~ 402 (488)
..+...++.+.+|.++..|+.+ ++..++-+++.+++.+.|.... +.+.. +.+. ..++
T Consensus 279 ~~~~~~~~G~n~rmsel~AAig~~qL~~l---------~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK15407 279 HKYTYSHLGYNLKITDMQAAIGLAQLEKL---------PGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFP 349 (438)
T ss_pred ccccccccccccCccHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEE
Confidence 1122347788888888888865 5677777888888888887653 22211 1121 2445
Q ss_pred EEeCCc--chHHHHHHHHHHCCceEEeecCC-Cc---c---------C---------CCCeEEEeecCCCCHHHHHHHHH
Q 040324 403 IMVYNP--AKVSSFSRECLKQNVAIVTVGFP-AT---P---------L---------LLARARICISASHTKEDLIEALE 458 (488)
Q Consensus 403 ~~~~~~--~~~~~~~~~l~~~Gi~v~~~~~~-~~---~---------~---------~~~~iRi~~~~~~t~edid~~l~ 458 (488)
+.+... ..-.++.+.|.++||.+.. .|+ .. | . ....+-+-++...|++|++++++
T Consensus 350 i~~~~~~~~~Rd~l~~~L~~~GI~~~~-~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~ 428 (438)
T PRK15407 350 ITVKEDAGFTRVELVKYLEENKIGTRL-LFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIE 428 (438)
T ss_pred EEECCcCCCCHHHHHHHHHHCCCCccc-cCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHH
Confidence 555432 2356899999999997763 221 00 0 0 11234455556679999999999
Q ss_pred HHHHHHH
Q 040324 459 VISRIGD 465 (488)
Q Consensus 459 ~l~~~~~ 465 (488)
+|+++++
T Consensus 429 ~i~~~~~ 435 (438)
T PRK15407 429 KIEEFFG 435 (438)
T ss_pred HHHHHHh
Confidence 9999875
No 309
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.81 E-value=1.4e-17 Score=167.42 Aligned_cols=290 Identities=16% Similarity=0.070 Sum_probs=197.2
Q ss_pred ChhhHHHHHHHHHHHhCCC---CeEEeC-CcHHHHhhhhhcccCC-CcEEEEeCCCchHHHHH-H-HhcCC-eEEEeeCC
Q 040324 144 TLALHNELEECVARFVGKP---AAIVFG-MGYVTNSSILPVLMGK-GSLIISDSLNHNSIVNG-A-RGSGA-TIRVFQHN 215 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~---~~i~~~-sGs~a~~~~~~~~~~~-~~~Vl~~~~~h~~~~~~-~-~~~g~-~v~~~~~~ 215 (488)
.....++.++.++++++.+ ++++++ |||.+...++..+.++ ++.|+. ...|++.... + +..|. ++..++..
T Consensus 46 f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~ 124 (378)
T PRK03080 46 VKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEAD 124 (378)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccC
Confidence 3466789999999999963 466665 7888887777777664 556665 5688775543 2 44577 77776643
Q ss_pred --CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcch
Q 040324 216 --TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCE 293 (488)
Q Consensus 216 --d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~ 293 (488)
...++++ ++. .+ +|.+..+.+.+|.+.|+++|.+ +++|+++++|.+|++|...
T Consensus 125 ~g~~~d~~~-i~~-------------~~-~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~p-------- 179 (378)
T PRK03080 125 YGSLPDLSA-VDF-------------DR-DVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALP-------- 179 (378)
T ss_pred CCCCCCHhh-cCC-------------CC-CEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCC--------
Confidence 1112222 211 22 3556777788899999999999 8899999999999976653
Q ss_pred hcCCCCCCccEEEcccccccCC-cc-cEEEeCHHHHHHHHhhCCC-------------------CcccC--CCCHHHHHH
Q 040324 294 LLGVDTSDVDIMMGTFSKSFGS-YG-GYIAGSKELIQYLKYNCPA-------------------HLYAT--SISPPAAEQ 350 (488)
Q Consensus 294 ~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~~~~~~~~~~~~~~~-------------------~~~~~--~~~p~~~aa 350 (488)
+++ +++|++++|..|++++ +| |+++.+++..+.+.....+ +..++ +.+.....+
T Consensus 180 -idv--~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~ 256 (378)
T PRK03080 180 -LDW--SKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVED 256 (378)
T ss_pred -CCH--HHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHH
Confidence 233 4479999999999976 67 9999999988776542110 00111 122233445
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCC---CCC-CeEEEEeCCc--chHHHHHHHHHHCCc
Q 040324 351 IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGD---NDS-PVMPIMVYNP--AKVSSFSRECLKQNV 423 (488)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~---~~~-~~~~~~~~~~--~~~~~~~~~l~~~Gi 423 (488)
..++|+.+.... ..+.+.++.+++.+++++.|++++ +.+... ..+ .++.+.+... ....++...|+++|+
T Consensus 257 l~~al~~l~~~g---G~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i 333 (378)
T PRK03080 257 YLDQLDWANSIG---GLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENG 333 (378)
T ss_pred HHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCC
Confidence 567888885321 357788899999999999999886 455432 123 3555554431 123457777888888
Q ss_pred eEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 424 AIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 424 ~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
.+...++.. ..+.+|++++..+|++|+++++++|++++++++
T Consensus 334 ~v~~g~~~~---~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 334 AVDIEPYRD---APNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred eeccccccC---CCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 876433321 236899999999999999999999999887764
No 310
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=1.3e-17 Score=166.05 Aligned_cols=281 Identities=15% Similarity=0.122 Sum_probs=188.8
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhc--CCeEEEeeCCCHHHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGS--GATIRVFQHNTPSHLEE 222 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~--g~~v~~~~~~d~~~Le~ 222 (488)
.+...+||+++|++.+.+.++++++|.+|+..++. +.++||.|++..+.|+.....+... ...+...-..|++++++
T Consensus 53 ~p~~~~le~~lA~leg~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 131 (364)
T PRK07269 53 NPTRAKLEETLAAIESADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIA 131 (364)
T ss_pred CccHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHHH
Confidence 34568999999999999999999999999877664 5689999999988887765433221 11121111247888888
Q ss_pred HHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCc
Q 040324 223 VLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDV 302 (488)
Q Consensus 223 ~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~ 302 (488)
.+++ ++.+|+++.+.++.|.+.++++|+++|+++|+++|+|+++..+.+. +. . ....
T Consensus 132 ~i~~-------------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~---~p----l---~~ga 188 (364)
T PRK07269 132 AIEE-------------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ---RP----I---ELGA 188 (364)
T ss_pred hcCc-------------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC---Cc----h---hhCC
Confidence 7753 3346778888888999999999999999999999999997632221 11 1 1345
Q ss_pred cEEEcccccccCC----cccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 040324 303 DIMMGTFSKSFGS----YGGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIREN 377 (488)
Q Consensus 303 di~~~t~sK~~g~----~Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (488)
|+++.|++|.+++ .||++++ ++++.+.++.... ..+..++|..++.++..|+.+ +.++++.+++
T Consensus 189 Divv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~--~~G~~~s~~~a~l~~~~L~tL---------~~r~~~~~~n 257 (364)
T PRK07269 189 DIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLN--TTGAVLSPFDSYLLMRGLKTL---------SLRMERSTAN 257 (364)
T ss_pred cEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHH--HhCCCCCHHHHHHHHcCCCcH---------HHHHHHHHHH
Confidence 8999999999976 2488776 5677776654322 223458898888888877755 6678888999
Q ss_pred HHHHHHHHHhCC-C-eecCCCCCCeEEEEeCCcchHHHHHHHHHH----------CCceEEeecCC--C--------ccC
Q 040324 378 SNFFRSKLQKMG-F-EVLGDNDSPVMPIMVYNPAKVSSFSRECLK----------QNVAIVTVGFP--A--------TPL 435 (488)
Q Consensus 378 ~~~l~~~L~~~g-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------~Gi~v~~~~~~--~--------~~~ 435 (488)
...+.+.|++.. + .+.-+..+.++.+.+........|.+.+.- +.+++.|..-. . ...
T Consensus 258 a~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi 337 (364)
T PRK07269 258 AQEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGL 337 (364)
T ss_pred HHHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCC
Confidence 999999998763 3 344344566777776543334445544331 13333321100 0 011
Q ss_pred CCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 436 LLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 436 ~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
.++.+||++.+ ||.+.+++-|++++
T Consensus 338 ~~~liRlsvGl----E~~~dli~dl~~al 362 (364)
T PRK07269 338 TDDLLRLSIGI----EDARDLIADLKQAL 362 (364)
T ss_pred CCCeEEEEecc----CCHHHHHHHHHHHh
Confidence 24689999854 45556666666554
No 311
>PLN02271 serine hydroxymethyltransferase
Probab=99.81 E-value=2.8e-17 Score=165.83 Aligned_cols=321 Identities=16% Similarity=0.151 Sum_probs=203.2
Q ss_pred ccchHHHHHHH-HHcCCCCCCcccCCCChhhHHHHH----HHHHHHhCCC-----CeEEeCCcHHHHhhhhhcccCCCcE
Q 040324 118 EYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNELE----ECVARFVGKP-----AAIVFGMGYVTNSSILPVLMGKGSL 187 (488)
Q Consensus 118 ~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~-----~~i~~~sGs~a~~~~~~~~~~~~~~ 187 (488)
|.+.+++-..+ .+|..++.+.|++.|. +...++| ++..+.++.+ ..+-.-||+.||.+++.++++|||.
T Consensus 162 ~av~~algS~ltnkYaEG~pG~Ryy~G~-~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~ 240 (586)
T PLN02271 162 RAVMEALGSHLTNKYSEGMPGARYYTGN-QYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDR 240 (586)
T ss_pred HHHHHHhcCcccccCCCCCCCCcCCCCC-hhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCE
Confidence 34444443333 3477777777776654 3333333 4444566754 2455669999999999999999999
Q ss_pred EEEeCCCchHHHHH---------HHhcCCeE--EEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-c
Q 040324 188 IISDSLNHNSIVNG---------ARGSGATI--RVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-I 249 (488)
Q Consensus 188 Vl~~~~~h~~~~~~---------~~~~g~~v--~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v 249 (488)
|+..+..|+..... +..+|... .+++.+ |++++++..... +..+|++++ .
T Consensus 241 IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~------------rPKLII~g~Sa 308 (586)
T PLN02271 241 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDF------------RPKILICGGSS 308 (586)
T ss_pred EEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhc------------CCeEEEECchh
Confidence 99977666654332 12234333 333343 888988865441 333555544 5
Q ss_pred CCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEccccccc-CCcccEEEeCHH---
Q 040324 250 YSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSF-GSYGGYIAGSKE--- 325 (488)
Q Consensus 250 ~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~-g~~Gg~i~~~~~--- 325 (488)
|+ ...|+++++++|+++|++|++|.+|..|.+.-. .+...-+.+|++.+|.+|+| |.-||+|+.+++
T Consensus 309 yp---r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g------~~~sP~~~aDvvt~TTHKtLrGPrGG~I~~r~~~~~ 379 (586)
T PLN02271 309 YP---REWDYARFRQIADKCGAVLMCDMAHISGLVAAK------ECVNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGPKL 379 (586)
T ss_pred cc---CcCCHHHHHHHHHHcCCEEEEECcccccccccC------cCCCCCcCCcEEEeCCcccCCCCCceEEEecccccc
Confidence 55 345899999999999999999999997766411 11111134799999999999 555777777653
Q ss_pred -----------------HHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 326 -----------------LIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 326 -----------------~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
+.+.+...-.+...+. ......|+...+++.+. .++..+..+++.+|++.|.+.|.+.
T Consensus 380 ~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgG-phn~~IAalAvalkea~----~~efk~Ya~QVv~NAkaLA~~L~~~ 454 (586)
T PLN02271 380 RKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGG-PHNNHIAALAIALKQVA----TPEYKAYMQQVKKNAQALASALLRR 454 (586)
T ss_pred cccCCccccccccccHHHHHHhhcccCCccccC-hhHHHHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 3444443322222221 12223444445566542 3356789999999999999999999
Q ss_pred CCeecCC-CCCCeEEEEeCCcc-hHHHHHHHHHHCCceEEeecCCC--ccCCCCeEEEeecCC----CCHHHHHHHHHHH
Q 040324 389 GFEVLGD-NDSPVMPIMVYNPA-KVSSFSRECLKQNVAIVTVGFPA--TPLLLARARICISAS----HTKEDLIEALEVI 460 (488)
Q Consensus 389 g~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~~~~~~--~~~~~~~iRi~~~~~----~t~edid~~l~~l 460 (488)
|+.++.. .+++.+.+.+.... ......+.|.+-||.+....-|. .+...+.+||..+.. ..++|++++.+.|
T Consensus 455 G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i 534 (586)
T PLN02271 455 KCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFL 534 (586)
T ss_pred CCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHH
Confidence 9987642 34477777764433 23344444444599987522222 233346799986544 4468999999999
Q ss_pred HHHHH
Q 040324 461 SRIGD 465 (488)
Q Consensus 461 ~~~~~ 465 (488)
.++++
T Consensus 535 ~~~~~ 539 (586)
T PLN02271 535 LRAAQ 539 (586)
T ss_pred HHHHh
Confidence 99887
No 312
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.80 E-value=1.9e-17 Score=165.95 Aligned_cols=284 Identities=15% Similarity=0.153 Sum_probs=185.3
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+....|++++|++.|.+.+++++||+.|+..++ .+.++|+.|++..+.|+.+... +...|.++..++..|++++
T Consensus 49 ~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l 127 (380)
T PRK06176 49 NPTRFALEELIADLEGGVKGFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQI 127 (380)
T ss_pred ChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHH
Confidence 3556899999999999999999999998876555 4678999999999988876533 3456788888877788888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ +..+|+++...++.|.+.++++|.++|+++|+++|+|++|+.+.+++ . .+ .
T Consensus 128 ~~ai~~-------------~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~---p----~~---~ 184 (380)
T PRK06176 128 KKAIKP-------------NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQN---P----LL---L 184 (380)
T ss_pred HHhcCc-------------CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCC---c----cc---c
Confidence 887753 34467778888899999999999999999999999999998433221 1 11 2
Q ss_pred CccEEEcccccccCCc----ccEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
..|+++.|++|.++++ ||+++++ +++.+.++..... .+...+|..+......++. ...+.++..
T Consensus 185 gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~--~G~~~~~~~~~l~~~gl~t---------l~~R~~~~~ 253 (380)
T PRK06176 185 GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNA--IGGVLGPQDSWLLQRGIKT---------LGLRMEAHQ 253 (380)
T ss_pred CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHH--hcCCCCHHHHHHHHhccCc---------HHHHHHHHH
Confidence 4589999999999763 4777764 5666666543331 2233556544444333332 245666667
Q ss_pred HHHHHHHHHHHhCC-Ce-ec----------------CCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEe------ecCC
Q 040324 376 ENSNFFRSKLQKMG-FE-VL----------------GDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVT------VGFP 431 (488)
Q Consensus 376 ~~~~~l~~~L~~~g-~~-~~----------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~------~~~~ 431 (488)
++...+.+.|++.. +. +. ....+.++.+.+.....+.+|.+.|.--.+.+.- +..|
T Consensus 254 ~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p 333 (380)
T PRK06176 254 KNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVESLVGIP 333 (380)
T ss_pred HHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccCCCCCCceeeCC
Confidence 77777777777641 11 10 0122456777775444444554444311111100 0111
Q ss_pred Cc--------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 432 AT--------------PLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 432 ~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.. ...++.+||++. -||.|.+++-|++++++.
T Consensus 334 ~~~~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 334 AFMTHACIPKEQREAAGIRDGLVRLSVG----IEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred cccccccCCHHHHHhcCCCcCeEEEEec----cCCHHHHHHHHHHHHhhc
Confidence 11 112468999985 356777777777777654
No 313
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.9e-17 Score=165.86 Aligned_cols=209 Identities=18% Similarity=0.210 Sum_probs=158.1
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++.+|++.|.+.++++++|+.++..++ .++++||.|++..+.|+++... +...|.++..++..|++++
T Consensus 49 ~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l 127 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEV 127 (377)
T ss_pred ChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHH
Confidence 4567899999999999999999999987765544 5678999999999999865432 3446888888888889998
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++++++ ++.+|+++...++.|.+.++++|+++|+++|+++|+||+|+.+.++ +. . . .
T Consensus 128 ~~ai~~-------------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~---~p-~---~---~ 184 (377)
T PRK07671 128 EEAIRP-------------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQ---SP-I---S---L 184 (377)
T ss_pred HHhcCC-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccC---Ch-h---h---h
Confidence 888753 3346677888888999999999999999999999999999733222 11 1 1 2
Q ss_pred CccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
..|+++.|++|.+|+. ||+++. ++++++.++..... .+...+|..+..++..++.+ ..++++..
T Consensus 185 g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~--~g~~~~~~~a~l~~~~l~tl---------~~R~~~~~ 253 (377)
T PRK07671 185 GADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNS--TGGILGPQDSWLLLRGLKTL---------GIRMEEHE 253 (377)
T ss_pred CCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHh--hcCCCCHHHHHHHHcCcChH---------HHHHHHHH
Confidence 3489999999999853 365655 56777777654432 23447777777666666554 55778888
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
++...+.+.|++.
T Consensus 254 ~na~~la~~L~~~ 266 (377)
T PRK07671 254 TNSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999865
No 314
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.80 E-value=5.2e-17 Score=162.26 Aligned_cols=276 Identities=14% Similarity=0.152 Sum_probs=186.7
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++. .++++++++|++++..++.++.++||.|++..+.|+.+...+ ...|.+++.++.++...
T Consensus 50 ~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~- 127 (366)
T PRK07582 50 NPTWRALEAALGELE-GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE- 127 (366)
T ss_pred CccHHHHHHHHHHHc-CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH-
Confidence 355689999999999 678999999999988888888999999999999887776543 34588888888765322
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
. +.+ ++.+|+++...+++|.+.++++|.++|+++|+++|+|++|.. ..+ ....+ .
T Consensus 128 -~-~~~-------------~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~-~~~---~~p~~------~ 182 (366)
T PRK07582 128 -A-ALA-------------GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTAT-PLG---QRPLE------L 182 (366)
T ss_pred -H-hcc-------------CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCC-ccc---cCchh------c
Confidence 1 111 234566788888999999999999999999999999999852 122 11111 2
Q ss_pred CccEEEcccccccCC-c---ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGS-Y---GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~-~---Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
..|+++.|++|.+++ + +||+++ ++++.+.++..... .+...+|..+..++..|+.+ +.+.++..
T Consensus 183 g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~--~g~~~~~~~a~l~~r~l~tl---------~~R~~~~~ 251 (366)
T PRK07582 183 GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLL--AGAIPGPFEAWLAHRSLGTL---------GLRFARQC 251 (366)
T ss_pred CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHH--hCCCCCHHHHHHHHhccccH---------HHHHHHHH
Confidence 348999999999965 3 388886 47787777654331 23346777777666666543 55668888
Q ss_pred HHHHHHHHHHHhCC-Ce-ec----C--C----------CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCc----
Q 040324 376 ENSNFFRSKLQKMG-FE-VL----G--D----------NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT---- 433 (488)
Q Consensus 376 ~~~~~l~~~L~~~g-~~-~~----~--~----------~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~---- 433 (488)
+++..+.+.|++.. +. +. . + ..+.++.+.+.+ ..+..+.+...++.....++...
T Consensus 252 ~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~---~~~~~~~~~~l~~~~~~~s~G~~~sl~ 328 (366)
T PRK07582 252 ANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELAD---AAAAERFVAASRLVVAATSFGGVHTSA 328 (366)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCC---HHHHHHHHHhCCcceecccCCCccchh
Confidence 99999999998762 21 11 1 1 134566777653 23333334444665542111110
Q ss_pred --------cCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 434 --------PLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 434 --------~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
...++.||+++.+..+++.++.+.++|+
T Consensus 329 ~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 329 DRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 0224689999987777666666666654
No 315
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.80 E-value=9.3e-17 Score=161.59 Aligned_cols=296 Identities=20% Similarity=0.254 Sum_probs=195.6
Q ss_pred hhhHHHHHHHHHHHhCCC---CeEEeCCcH-HHHhhhhhccc--C-CCcEEEEeCCCchHHHHHHHhcCCeEEEeeC---
Q 040324 145 LALHNELEECVARFVGKP---AAIVFGMGY-VTNSSILPVLM--G-KGSLIISDSLNHNSIVNGARGSGATIRVFQH--- 214 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~---~~i~~~sGs-~a~~~~~~~~~--~-~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~--- 214 (488)
..+..++++.+++++|.+ .++++++|| .++..++.++. + +++.|+++...|.++..++...|++++.++.
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 345589999999999987 688899888 45555555543 2 5889999999999999999999999988873
Q ss_pred -C----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCC
Q 040324 215 -N----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 215 -~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~ 289 (488)
+ |+++|+++|.+. .+..+++|+..+-+...|...++++|.++|++||+++|+|++|+.+. ..
T Consensus 184 ~~~~~iD~e~Le~aIt~~---------~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~--~~-- 250 (444)
T TIGR03531 184 GDELTTDVEDIERAIEEI---------GPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS--NK-- 250 (444)
T ss_pred CcCCCcCHHHHHHHHHhc---------cCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC--hh--
Confidence 1 899999999752 11245566655545555677899999999999999999999998321 11
Q ss_pred Ccchh--cCCCCCCccEEEcccccccCCcc--cEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCC
Q 040324 290 GVCEL--LGVDTSDVDIMMGTFSKSFGSYG--GYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGS 364 (488)
Q Consensus 290 ~~~~~--~~v~p~~~di~~~t~sK~~g~~G--g~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~ 364 (488)
..+. -+.+...+|+++.+++|.+..+| |+++. ++++++.+.....+ ....++ .+.+....+ .+ +.
T Consensus 251 -~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g---~~~~s~-~~~~~~~ll-~~----G~ 320 (444)
T TIGR03531 251 -YMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPG---RASASP-SLDVLITLL-SL----GS 320 (444)
T ss_pred -hhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccC---CCCChH-HHHHHHHHH-Hh----CH
Confidence 0011 11211135888889999997643 55656 68888888764322 111222 333322333 22 33
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCCCCeEEEEeCC---cchHHHHHHHHHHCCce---EEeecC----
Q 040324 365 CRGAQKLARIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYN---PAKVSSFSRECLKQNVA---IVTVGF---- 430 (488)
Q Consensus 365 ~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~Gi~---v~~~~~---- 430 (488)
+..++++++..++.+++.+.|+++ |..+...+..++...+... +.+...+.-.|..++|. +++.+-
T Consensus 321 ~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~ 400 (444)
T TIGR03531 321 KGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTV 400 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEE
Confidence 467888888899999999999876 5666655445543222222 34567888888888663 222110
Q ss_pred ---CCccCCC-------CeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 431 ---PATPLLL-------ARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 431 ---~~~~~~~-------~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.+...+. .++-+.....+|++|||.++++|+++
T Consensus 401 ~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 401 GGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 0001111 13444445668999999999999875
No 316
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=3.2e-17 Score=166.65 Aligned_cols=211 Identities=19% Similarity=0.240 Sum_probs=159.5
Q ss_pred hhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHHH
Q 040324 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLE 221 (488)
Q Consensus 146 ~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~Le 221 (488)
+...+|++.+|++.|.+.+++++||++|+..++.++.++|+.|+++.+.|+.+... +...|..++.++.+|+++++
T Consensus 63 p~~~~le~~lA~l~g~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~ 142 (427)
T PRK05994 63 PTNAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFE 142 (427)
T ss_pred ccHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHH
Confidence 45688999999999999999999999999888888899999999999999876543 45578999999888899988
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCC
Q 040324 222 EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSD 301 (488)
Q Consensus 222 ~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~ 301 (488)
+.+.+ ++.+|+++.+.++.|.+.++++|+++|+++|+++|+|++|+.+... . .+ ..+
T Consensus 143 ~ai~~-------------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-------~--pl-~~g 199 (427)
T PRK05994 143 RAITP-------------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-------R--PI-EHG 199 (427)
T ss_pred HhcCc-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-------C--cc-ccC
Confidence 87753 3456777899999999999999999999999999999999743221 1 11 134
Q ss_pred ccEEEcccccccCCcc----cEEEeCHH-----------------------HHHHHH-------h-hCCCCcccCCCCHH
Q 040324 302 VDIMMGTFSKSFGSYG----GYIAGSKE-----------------------LIQYLK-------Y-NCPAHLYATSISPP 346 (488)
Q Consensus 302 ~di~~~t~sK~~g~~G----g~i~~~~~-----------------------~~~~~~-------~-~~~~~~~~~~~~p~ 346 (488)
+|+++.|++|.+|+.| |+++.... +.+.+. . .......+..++|.
T Consensus 200 aDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 279 (427)
T PRK05994 200 ADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPF 279 (427)
T ss_pred CcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHH
Confidence 5899999999998643 55553211 111100 0 00001234458888
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 347 AAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
.++.++..|+.+ ..+.++..+++..+.+.|++.
T Consensus 280 ~A~l~~~~l~tL---------~~r~~~~~~~a~~la~~L~~~ 312 (427)
T PRK05994 280 NAFLILTGIETL---------PLRMQRHSDNALAVAEWLKGH 312 (427)
T ss_pred HHHHHHcCcccH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 888877777755 667888889999999999875
No 317
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.80 E-value=3.7e-17 Score=163.92 Aligned_cols=210 Identities=12% Similarity=0.157 Sum_probs=159.5
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++.+|++.+.+.++++++|++++..++.++.++||.|++..+.|+.+...+ ...+..+..++..|++++
T Consensus 50 ~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l 129 (382)
T TIGR02080 50 NPTRDLLQQALAELEGGAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQAL 129 (382)
T ss_pred CchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHH
Confidence 4556899999999999888998999999988888888999999999999998765432 223456666666678888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+||+|..+.... .+. .
T Consensus 130 ~~ai~~-------------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~---------pl~-~ 186 (382)
T TIGR02080 130 RAALAQ-------------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQN---------PLA-L 186 (382)
T ss_pred HHhcCc-------------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCC---------chh-h
Confidence 887753 23466778889999999999999999999999999999997432211 111 2
Q ss_pred CccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
..|+++.|++|.+++. +|+++. ++++.+.++..... .+..++|..+..++..|+.+ ..+.++..
T Consensus 187 gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~--~g~~~sp~~a~l~lr~l~tl---------~~R~~~~~ 255 (382)
T TIGR02080 187 GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANN--LGVTGGAFDSYLTLRGLRTL---------VARMRLQQ 255 (382)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHc--cCCCCCHHHHHHHHcccchH---------HHHHHHHH
Confidence 3489999999999752 377765 67787777654432 24458888888777777765 45677788
Q ss_pred HHHHHHHHHHHhC
Q 040324 376 ENSNFFRSKLQKM 388 (488)
Q Consensus 376 ~~~~~l~~~L~~~ 388 (488)
+++..+.+.|++.
T Consensus 256 ~na~~~a~~L~~~ 268 (382)
T TIGR02080 256 RNAQAIVEYLQTQ 268 (382)
T ss_pred HHHHHHHHHHHhC
Confidence 8888888888865
No 318
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.79 E-value=3.2e-17 Score=166.59 Aligned_cols=155 Identities=19% Similarity=0.208 Sum_probs=125.0
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+...+|++++|++.|.+.++++++|++|+..++.+++++|+.|++..+.|+.+... +...|.++..++.+|++++
T Consensus 56 ~p~~~~le~~lA~l~g~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l 135 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEF 135 (418)
T ss_pred ChhHHHHHHHHHHHhCCCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHH
Confidence 355689999999999999999999999999888888889999999999888765433 4567899999998899999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+.+ +..+|+++.+.++.|.+.++++|+++|+++|+++|+||+|+.+... ... ..
T Consensus 136 ~~~l~~-------------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-------~~l---~~ 192 (418)
T TIGR01326 136 EKAIDE-------------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-------RPI---DH 192 (418)
T ss_pred HHhcCc-------------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-------Cch---hc
Confidence 887754 2346667888999999999999999999999999999999743211 111 13
Q ss_pred CccEEEcccccccCCcc---cEEEe
Q 040324 301 DVDIMMGTFSKSFGSYG---GYIAG 322 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~G---g~i~~ 322 (488)
+.|+++.|++|.+|+.| |+++.
T Consensus 193 g~Divv~S~sK~l~g~G~~lGg~v~ 217 (418)
T TIGR01326 193 GADIVVHSATKYIGGHGTAIGGVIV 217 (418)
T ss_pred CCeEEEECccccccCCccceEEEEE
Confidence 45999999999998765 55444
No 319
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.79 E-value=5.7e-17 Score=157.15 Aligned_cols=334 Identities=19% Similarity=0.217 Sum_probs=202.0
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCC--hhhHHHHHHHHHHHhCCC--CeEEeCCcHHHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGT--LALHNELEECVARFVGKP--AAIVFGMGYVTN 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~--~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~ 174 (488)
..-|||.. ..+..+|.|.+|+.+.+..+-. ...++ .+|. .+..++.|+.+|++++.+ +.+|++++|++|
T Consensus 43 ~~vyld~~-----at~p~~~~Vldam~~~~~~~~~-nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~ 115 (428)
T KOG1549|consen 43 RPVYLDNQ-----ATGPMDPRVLDAMLPYLLEYLG-NPHSR-SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESN 115 (428)
T ss_pred ccEEEecC-----cCCCCCHHHHHHHHHHHHHhhc-CCCcc-ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHH
Confidence 45667755 3444578999999998877422 22233 2333 334688999999999984 455556677777
Q ss_pred hhhhhccc-CCCc----EEEEeCCCchHHHHHHHh---cCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCce
Q 040324 175 SSILPVLM-GKGS----LIISDSLNHNSIVNGARG---SGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKK 241 (488)
Q Consensus 175 ~~~~~~~~-~~~~----~Vl~~~~~h~~~~~~~~~---~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~ 241 (488)
..+++... ..++ .|++....|++...+++. .|..+..+|.+ |++.+++.|+. ++
T Consensus 116 Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~-------------~T 182 (428)
T KOG1549|consen 116 NLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRS-------------KT 182 (428)
T ss_pred HHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCC-------------Cc
Confidence 66555442 2233 899999999998877654 47778777755 66777777664 56
Q ss_pred EEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEE
Q 040324 242 IMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYI 320 (488)
Q Consensus 242 ~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i 320 (488)
.+|.+..|.++.|...|+++|.++|+++++.+++|.+|++|-.. .+++.-++|++..+.+|++|.+| |++
T Consensus 183 ~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~---------vDV~eln~D~~s~s~HK~ygp~~iGaL 253 (428)
T KOG1549|consen 183 RLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIP---------VDVQELNADFLSISAHKIYGPPGIGAL 253 (428)
T ss_pred eEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcc---------ccHHHcCchheeeecccccCCCcceEE
Confidence 78889999999999999999999999999999999999976553 34444556899999999999987 888
Q ss_pred EeCHHHHHHHHhhC--------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CC
Q 040324 321 AGSKELIQYLKYNC--------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GF 390 (488)
Q Consensus 321 ~~~~~~~~~~~~~~--------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~ 390 (488)
..+++. ..++... .++--+ +...+.+...-++.+...++ .........+....+..++... ..
T Consensus 254 Yvr~~~-~~~~~~p~~~GGgq~r~~rsG-T~~~~~~~~~gsA~e~~~~~-----~~~~~~~~~~~~~~ll~~i~~~~~~~ 326 (428)
T KOG1549|consen 254 YVRRKR-PRLRVEPPLSGGGQERGLRSG-TVATPLAVGLGSAAEFVNKE-----MAYDEAIIKRLSEKLLMGIGQSLPEV 326 (428)
T ss_pred EEccCC-CcccccCcccCCccccccccC-CcCchhhhhhHHHHHHHHhh-----cchhHHHHHHHHHHHHHHHhhhCchh
Confidence 887611 1111100 011111 23333334444555555321 1112222233455555555331 11
Q ss_pred eecCCCCC---CeEEEEeC--Ccc-hHHHHHHHHHHCCceEEeecC-C---------CccCCCCeEEEeecCCCCHHHHH
Q 040324 391 EVLGDNDS---PVMPIMVY--NPA-KVSSFSRECLKQNVAIVTVGF-P---------ATPLLLARARICISASHTKEDLI 454 (488)
Q Consensus 391 ~~~~~~~~---~~~~~~~~--~~~-~~~~~~~~l~~~Gi~v~~~~~-~---------~~~~~~~~iRi~~~~~~t~edid 454 (488)
...+++.. ....+-+. ... ...+.....+.-|..+..... | .....++.+||++....|++|++
T Consensus 327 ~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~ 406 (428)
T KOG1549|consen 327 TLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDID 406 (428)
T ss_pred hccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHH
Confidence 11221111 11111111 011 111111112222322221100 0 01123578999999999999999
Q ss_pred HHHHHHHHHHHHhC
Q 040324 455 EALEVISRIGDLVG 468 (488)
Q Consensus 455 ~~l~~l~~~~~~~~ 468 (488)
++++.+.+.+..+.
T Consensus 407 ~~~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 407 YLVDAIKKLVSLLR 420 (428)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999887653
No 320
>PLN02590 probable tyrosine decarboxylase
Probab=99.79 E-value=3.6e-16 Score=161.11 Aligned_cols=305 Identities=14% Similarity=0.114 Sum_probs=198.5
Q ss_pred hhhHHHHHHHHHHHhCCCC---------eEEeCCcHHHHhhhhhccc-----------CCCcEEEEeCCCchHHHHHHHh
Q 040324 145 LALHNELEECVARFVGKPA---------AIVFGMGYVTNSSILPVLM-----------GKGSLIISDSLNHNSIVNGARG 204 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~---------~i~~~sGs~a~~~~~~~~~-----------~~~~~Vl~~~~~h~~~~~~~~~ 204 (488)
+.+..++-+.+++++|.++ .+++++||+||+.++.+.. .+.-+|.+++..|.++..++++
T Consensus 169 t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~i 248 (539)
T PLN02590 169 TELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLI 248 (539)
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHH
Confidence 3344455555566666543 5788899999965443321 1233666788899999999999
Q ss_pred cCC---eEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 205 SGA---TIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 205 ~g~---~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
.|. .++.++.+ |+++|++.|++....|. ...+|+...-....|.+.||++|.++|++||+||+
T Consensus 249 lGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~-------~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlH 321 (539)
T PLN02590 249 GGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGF-------IPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLH 321 (539)
T ss_pred cCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCC-------CcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEE
Confidence 876 35566542 89999999988765541 23344433333346999999999999999999999
Q ss_pred EEcccccccc-CCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCH--HHHHHHHhhC----C----------
Q 040324 275 LDEAHSIGAV-GKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSK--ELIQYLKYNC----P---------- 335 (488)
Q Consensus 275 ~DE~~s~g~~-g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~--~~~~~~~~~~----~---------- 335 (488)
+|.+++...+ -+..+ .-..|+ ..+|-+....+|.+..+- |++..+. .+.+.+.... .
T Consensus 322 VDaA~GG~al~~~~~r--~~~~Gi--e~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d 397 (539)
T PLN02590 322 VDAAYAGNACICPEYR--KFIDGI--ENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVN 397 (539)
T ss_pred EecchhhhhhcChhhH--HHhcCC--ccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCC
Confidence 9999983221 11111 112355 345888889999997643 6655543 2323221100 0
Q ss_pred --CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCc----
Q 040324 336 --AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNP---- 408 (488)
Q Consensus 336 --~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~---- 408 (488)
.++... .-...+...+.+|+.+ +.+...+++++..+++++|.+.|++. +++++.++...++.+.+..+
T Consensus 398 ~~d~~i~l-sRr~raLklW~~lr~~----G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~ 472 (539)
T PLN02590 398 YKDWQISL-SRRFRSLKLWMVLRLY----GSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDE 472 (539)
T ss_pred ccccCCCC-CCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCH
Confidence 001111 1223445566677765 44467788889999999999999886 68887776666666655431
Q ss_pred ----chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 409 ----AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICI-SASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 409 ----~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
....++.+++.+.|..... ++.-.+..++|+|+ +...|++||+.+++.|.+..+++.
T Consensus 473 ~~~~~ln~~l~~~l~~~G~~~vs---~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 473 DQCNERNRELLAAVNSTGKIFIS---HTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEE---eeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 1223677777778666553 33334557899997 556779999999999999887775
No 321
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=1.3e-16 Score=162.03 Aligned_cols=211 Identities=18% Similarity=0.195 Sum_probs=157.7
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHH----HhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGA----RGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~~~~d~~~L 220 (488)
.+...++|+.+|++.|.+.+++++||++|+..++.++.++||.|++....|+++...+ ...|.++..++.+|++++
T Consensus 63 ~p~~~~le~~lA~l~g~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l 142 (433)
T PRK08134 63 NPTVAVLEERVAALEGGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGW 142 (433)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence 3667999999999999989999999999998777777889999999999998775544 336889999988899999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.|++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|.+|+.+.+.. .+ ..
T Consensus 143 ~~~i~~-------------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~---------pl-~~ 199 (433)
T PRK08134 143 RAAIRP-------------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLR---------PF-EH 199 (433)
T ss_pred HHhcCC-------------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCC---------ch-hc
Confidence 988864 34466778888889999999999999999999999999997443311 11 13
Q ss_pred CccEEEcccccccCCcc----cEEEeCHH--------------------------------HHHHHHhhCCCCcccCCCC
Q 040324 301 DVDIMMGTFSKSFGSYG----GYIAGSKE--------------------------------LIQYLKYNCPAHLYATSIS 344 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~G----g~i~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~ 344 (488)
++|+++.|.+|.+|+.| |+++.... .....+... ...++..++
T Consensus 200 GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~G~~ls 278 (433)
T PRK08134 200 GADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREG-LRDFGACLS 278 (433)
T ss_pred CCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHH-HHhcCCCCC
Confidence 45899999999998755 55443210 000011000 012344577
Q ss_pred HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 345 PPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
|..++..+..|+.+ ..+.++..+++..+.+.|++.
T Consensus 279 ~~~A~l~~~gL~tl---------~~R~~~~~~nA~~la~~L~~~ 313 (433)
T PRK08134 279 PMNAWQLLQGIETL---------PLRMERHVANTRKVVAFLASH 313 (433)
T ss_pred HHHHHHHhcCCCcH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 88777776666654 677888888888988888875
No 322
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=7.2e-17 Score=162.64 Aligned_cols=210 Identities=16% Similarity=0.161 Sum_probs=159.6
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCC-CHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHN-TPSH 219 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~-d~~~ 219 (488)
.+....||+.+|++.|.+.++.++||+.|+..++.++.++||.|+++.+.|+.+... +...|.++..+..+ |+++
T Consensus 60 nPtv~~lE~~la~leg~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~ 139 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADE 139 (432)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 355789999999999999999999999999888888899999999999999987765 56679999998875 8899
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
++++|++ +++ +|+++...++.+.+.++++|+++|+++|+++|+|++++...+ + ..-.
T Consensus 140 l~~~I~~------------~Tk-~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-------~---~pl~ 196 (432)
T PRK06702 140 IVALAND------------KTK-LVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-------C---QAFE 196 (432)
T ss_pred HHHhCCc------------CCe-EEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-------C---Chhh
Confidence 9888864 244 555788888889999999999999999999999999751111 1 1112
Q ss_pred CCccEEEcccccccCCcc----cEEEeCH----------HHH---------------------HHHH-hhCCCCcccCCC
Q 040324 300 SDVDIMMGTFSKSFGSYG----GYIAGSK----------ELI---------------------QYLK-YNCPAHLYATSI 343 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~G----g~i~~~~----------~~~---------------------~~~~-~~~~~~~~~~~~ 343 (488)
...||++.|++|.+|+.+ |+++... ++. ...+ .... .++..+
T Consensus 197 ~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~ 274 (432)
T PRK06702 197 HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLR--DYGNCM 274 (432)
T ss_pred cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHH--HccCCC
Confidence 345899999999887633 5555321 111 1111 1111 234568
Q ss_pred CHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 344 SPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
+|..+..++..|+.+ +.+.++..+|...+.+.|++.
T Consensus 275 sp~~a~l~~rgL~Tl---------~lR~~r~~~Na~~la~~L~~~ 310 (432)
T PRK06702 275 SPFNAYISNIGLETL---------HLRMERHSENALAVAKWLADH 310 (432)
T ss_pred CHHHHHHHHhccCcH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 999888888877754 567778889999999999876
No 323
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=7.5e-17 Score=163.73 Aligned_cols=210 Identities=17% Similarity=0.198 Sum_probs=157.8
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+....|++.+|++.|.+.+++++||+.|+..++..+.++||.|++..+.|+.+... ++..|.+++.++..|++++
T Consensus 63 ~p~~~~Le~~lA~leg~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l 142 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENF 142 (431)
T ss_pred CchHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHH
Confidence 355689999999999999999999999999888888889999999999988765433 4557899999988899999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++.+++ ++.+|+++.+.++.|.+.++++|.++|+++|+++|+|++++.+... . .+ ..
T Consensus 143 ~~ai~~-------------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~---~------pl-~~ 199 (431)
T PRK08248 143 EAAITD-------------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLL---R------PI-EH 199 (431)
T ss_pred HHhcCC-------------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccC---C------hh-Hc
Confidence 887753 2345666788889999999999999999999999999998622111 1 11 13
Q ss_pred CccEEEcccccccCCcc----cEEEeCHHHH-----------------------H----------HHHhhCCCCcccCCC
Q 040324 301 DVDIMMGTFSKSFGSYG----GYIAGSKELI-----------------------Q----------YLKYNCPAHLYATSI 343 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~G----g~i~~~~~~~-----------------------~----------~~~~~~~~~~~~~~~ 343 (488)
++|+++.|++|.+|+.| |+++.+.+.. + ...... ...+..+
T Consensus 200 gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~~l 277 (431)
T PRK08248 200 GADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLL--RDLGAAL 277 (431)
T ss_pred CCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHH--HhcCCCC
Confidence 46899999999998755 5555433210 0 010111 1234558
Q ss_pred CHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 344 SPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
+|..+...+..|+.+ ..+.++..+++..+.+.|++.
T Consensus 278 ~p~~a~l~~rgl~tl---------~~R~~~~~~nA~~la~~L~~~ 313 (431)
T PRK08248 278 SPFNSFLLLQGLETL---------HLRMERHSENALAVAKFLEEH 313 (431)
T ss_pred CHHHHHHHhcCcCcH---------HHHHHHHHHHHHHHHHHHHhC
Confidence 888777776666654 567888899999999999876
No 324
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.78 E-value=1e-15 Score=140.28 Aligned_cols=319 Identities=18% Similarity=0.200 Sum_probs=224.3
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCC---CeEEeCCcHHHHhhhhhcccCCCcEEEEeCC
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP---AAIVFGMGYVTNSSILPVLMGKGSLIISDSL 193 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~ 193 (488)
|-.+.+++++++.....++.++. ...+..++.+-+...+... -.++-++|+.+.+.++..+..|||.|++-..
T Consensus 25 Psnl~~~V~~A~~~~~lgh~sPe----~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~ 100 (385)
T KOG2862|consen 25 PSNLSGRVQEAMSRPSLGHMSPE----FVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVST 100 (385)
T ss_pred CcCCCHHHHHhhcCCccccCCHH----HHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEe
Confidence 44567788888877555553322 2345577777777777664 2455667887888888888889998887654
Q ss_pred C-chH-HHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC-hHHHHHH
Q 040324 194 N-HNS-IVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK-LPEIITI 265 (488)
Q Consensus 194 ~-h~~-~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~-l~~l~~l 265 (488)
. |+. .....+..|++|..++.+ .++.++++|.++ +..+|.+...-+.+|...+ ++..-++
T Consensus 101 G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh------------~p~~vfv~hgdsSTgV~q~~~~~~g~l 168 (385)
T KOG2862|consen 101 GTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQH------------KPKAVFVTHGDSSTGVLQDLLAISGEL 168 (385)
T ss_pred chHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhc------------CCceEEEEecCccccccchHHHHHHHH
Confidence 3 333 234467779999888644 688888888773 2334444455567788888 7888899
Q ss_pred HHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cc-cEEEeCHHHHHHHHhhCCC-------
Q 040324 266 CKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YG-GYIAGSKELIQYLKYNCPA------- 336 (488)
Q Consensus 266 ~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~~~~~~~~~~~~~~~------- 336 (488)
|++|+++|++|-|-|+|+.. |-.|..++|+....--|++|. +| +.|..++...+.++.....
T Consensus 169 c~k~~~lllVD~VaSlggt~---------F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd 239 (385)
T KOG2862|consen 169 CHKHEALLLVDTVASLGGTE---------FEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFD 239 (385)
T ss_pred hhcCCeEEEEechhhcCCcc---------ceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEe
Confidence 99999999999999977664 344556678888888899987 46 8888899888888653321
Q ss_pred --------------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCC----
Q 040324 337 --------------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS---- 398 (488)
Q Consensus 337 --------------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~---- 398 (488)
..|..+.+-.......++|+.|- ++..++..++.++++++++..|+++|++.......
T Consensus 240 ~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~----eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlp 315 (385)
T KOG2862|consen 240 ILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIA----EEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLP 315 (385)
T ss_pred HHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccC
Confidence 01112244556667778888873 34678899999999999999999999876443322
Q ss_pred CeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecC-CCCHHHHHHHHHHHHHHHHHh
Q 040324 399 PVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISA-SHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~-~~t~edid~~l~~l~~~~~~~ 467 (488)
.+-.+..+...+..++..++..+ ++.+.. + -.+....++||.+-. ..+.|.|+..++.|..++++-
T Consensus 316 tvttv~vp~gvDw~dVv~~~~~~~~vei~g-g--lg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 316 TVTTVKVPYGVDWKDVVAYAMSHYVVEIGG-G--LGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred cceeeecCCCCCHHHHHHHHHHhcCEEecc-c--cCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 12234555666788999999999 555542 2 233445789998643 357799999999999887653
No 325
>PLN02880 tyrosine decarboxylase
Probab=99.78 E-value=3.1e-16 Score=161.53 Aligned_cols=308 Identities=13% Similarity=0.084 Sum_probs=191.8
Q ss_pred ChhhHHHHHHHHHHHhCCCC---------eEEeCCcHHHHhhhhhccc----------C-CCcEEEEeCCCchHHHHHHH
Q 040324 144 TLALHNELEECVARFVGKPA---------AIVFGMGYVTNSSILPVLM----------G-KGSLIISDSLNHNSIVNGAR 203 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~---------~i~~~sGs~a~~~~~~~~~----------~-~~~~Vl~~~~~h~~~~~~~~ 203 (488)
.+....++-+.+++++|.++ .+++++||++|+.++.+.. + +.-+|++++..|.++..+++
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 34444556666666777653 5777888999955443321 1 23356678888999999999
Q ss_pred hcCCe---EEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEE
Q 040324 204 GSGAT---IRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYT 273 (488)
Q Consensus 204 ~~g~~---v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~l 273 (488)
..|.. ++.++.+ |+++|++.|++...+|. ...+|+...-....|.+.|+++|.++|++||+|+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~-------~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwl 272 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGL-------IPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWF 272 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCC-------ccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEE
Confidence 99874 4555542 89999999988765542 2334443333355699999999999999999999
Q ss_pred EEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCH--HHHHHHHhhC----CC-------Cc
Q 040324 274 YLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSK--ELIQYLKYNC----PA-------HL 338 (488)
Q Consensus 274 i~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~--~~~~~~~~~~----~~-------~~ 338 (488)
++|.+|+.+.+-. ...-....|+ ...|.+...++|.++.+- |++..+. .+.+.+.... .. ..
T Consensus 273 HVDaA~gg~~~~~-~~~~~~l~gi--e~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~ 349 (490)
T PLN02880 273 HVDAAYAGSACIC-PEYRHYIDGV--EEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVD 349 (490)
T ss_pred EEehhhHHHHHhC-HHHHHHhcCc--hhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCC
Confidence 9999998443211 0000012243 345888999999997643 6666542 2222221110 00 00
Q ss_pred cc---C-CCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcc----
Q 040324 339 YA---T-SISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPA---- 409 (488)
Q Consensus 339 ~~---~-~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~---- 409 (488)
+. . .+....+...+.+|+.+ +.+...+++++..++++++.+.|++. ++++..++...++.+.+....
T Consensus 350 ~~~~~i~~~rr~~alklw~~l~~~----G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~ 425 (490)
T PLN02880 350 YKDWQIPLGRRFRSLKLWMVLRLY----GVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNED 425 (490)
T ss_pred hhccCcCCCCcccHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChh
Confidence 00 0 00111123344456655 33345556666669999999999876 788887766666666654321
Q ss_pred ----hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCC-HHHHHHHHHHHHHHHHHhC
Q 040324 410 ----KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHT-KEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 410 ----~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t-~edid~~l~~l~~~~~~~~ 468 (488)
...++.++|.+.|-.... ++.-.+..++|+++....| ++|++.+++.|.++.+++.
T Consensus 426 ~~~~~n~~l~~~l~~~g~~~v~---~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 426 NGNKLNHDLLDAVNSSGKIFIS---HTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred hHHHHHHHHHHHHHhCCCEEEE---EEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123577777777544432 2222345689999865555 6999999999999887763
No 326
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=1.1e-15 Score=151.80 Aligned_cols=301 Identities=14% Similarity=0.130 Sum_probs=199.0
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH-HHhcCCeEEEeeC--------
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG-ARGSGATIRVFQH-------- 214 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~-~~~~g~~v~~~~~-------- 214 (488)
-++-..+||+.+++++|.+.++.+++|+.|...+....+++||.| +.++|..+..+ +...|+..+-++.
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~ 146 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQL 146 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeeccccccccc
Confidence 344457999999999999999999999999644567778999987 56777666655 6777876555521
Q ss_pred ------C-CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccc
Q 040324 215 ------N-TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGA 283 (488)
Q Consensus 215 ------~-d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~ 283 (488)
+ |++.|++.|++.. +....+|.+ -+++..+|.+. +++++.++|++||+.||.|.++.++-
T Consensus 147 ~~p~~GniD~~~Le~aI~~~~---------~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gN 217 (450)
T TIGR02618 147 NIPFKGNVDLKKLQKLIDEVG---------ADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVEN 217 (450)
T ss_pred CCCCCCCcCHHHHHHHhcccc---------CcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhC
Confidence 1 7999999887521 111223333 33444457663 58999999999999999999998632
Q ss_pred --c------CCCCCCc----chhcCCCCCCccEEEcccccccCCc-ccEEE-eCHHHHHHHHhhCCCC----cccCCCCH
Q 040324 284 --V------GKTGRGV----CELLGVDTSDVDIMMGTFSKSFGSY-GGYIA-GSKELIQYLKYNCPAH----LYATSISP 345 (488)
Q Consensus 284 --~------g~~g~~~----~~~~~v~p~~~di~~~t~sK~~g~~-Gg~i~-~~~~~~~~~~~~~~~~----~~~~~~~p 345 (488)
| |..+... .+.+ ...|.+..|..|.++.+ ||+++ .++++++..+.....+ +++ .+..
T Consensus 218 A~~I~~re~g~~~~~i~ei~~e~~----~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyG-gla~ 292 (450)
T TIGR02618 218 AYFIKEREQGYEDKSIAEILKEMM----SYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYG-GLAG 292 (450)
T ss_pred hhhhhcccccccCCCHHHHHHHHh----ccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccC-chhh
Confidence 2 2333333 1222 22477888999998764 78888 6788888887653211 222 1121
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC--------cchHHHHHHH
Q 040324 346 PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN--------PAKVSSFSRE 417 (488)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 417 (488)
-.+.+..-+|+.. ......++-..+.++|.+.|.+.|++++.+.+++.+.+.... .-....++.+
T Consensus 293 r~~~ala~gL~e~-------~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ 365 (450)
T TIGR02618 293 RDMEAMAIGIREA-------VDYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAAS 365 (450)
T ss_pred hhHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHH
Confidence 1222222334432 123455555667899999999999999878888877765421 1135577777
Q ss_pred HHHC-CceEEeecC------CCccCC----CCeEEEeecCC-CCHHHHHHHHHHHHHHHHHh
Q 040324 418 CLKQ-NVAIVTVGF------PATPLL----LARARICISAS-HTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 418 l~~~-Gi~v~~~~~------~~~~~~----~~~iRi~~~~~-~t~edid~~l~~l~~~~~~~ 467 (488)
|... ||-.+..|. |.+... -..+|+++|-- -|.+++|...+++..+.++-
T Consensus 366 ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 366 IYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred HHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 7766 887765332 111111 25799998644 68999999999999987653
No 327
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.77 E-value=3.7e-16 Score=155.39 Aligned_cols=283 Identities=17% Similarity=0.178 Sum_probs=194.0
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHH----hcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~----~~g~~v~~~~~~d~~~L 220 (488)
.+-...||+.||++-|.+.+++++||..|..+++.+++++||.|++....|+.+...+. ..|..+..++..|++++
T Consensus 54 nPt~~~le~~la~Le~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l 133 (386)
T PF01053_consen 54 NPTVRALEQRLAALEGGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEAL 133 (386)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHH
T ss_pred cccHHHHHHHHHHhhcccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHH
Confidence 46678999999999999999999999999988888899999999999998888776544 35889999988899999
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcC-cEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYK-AYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g-~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
++.+++ ++.+|++|.+-++...+.+|++|+++|+++| +++++|...+...+- .-+ .
T Consensus 134 ~~~l~~-------------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-------~pL---~ 190 (386)
T PF01053_consen 134 EAALRP-------------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-------NPL---E 190 (386)
T ss_dssp HHHHCT-------------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--------GG---G
T ss_pred Hhhccc-------------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-------ccC---c
Confidence 999875 5668889999999989999999999999998 999999998622111 001 1
Q ss_pred CCccEEEcccccccCCcc----cEEEeC--HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSYG----GYIAGS--KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLAR 373 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~G----g~i~~~--~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (488)
.+.|+++.|.+|.+++.+ |+++.+ +++.+.++.... .++..++|..+...+..|+.+ .-+.++
T Consensus 191 ~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~--~~G~~~~p~da~ll~rgl~Tl---------~~R~~~ 259 (386)
T PF01053_consen 191 LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR--LLGATLSPFDAWLLLRGLRTL---------PLRMER 259 (386)
T ss_dssp GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH--HHT-B--HHHHHHHHHHHTTH---------HHHHHH
T ss_pred CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh--hcCccchHHHHHHHhcCCCcH---------HHHHHH
Confidence 235899999999998633 777755 477776664433 345557888777777777654 668888
Q ss_pred HHHHHHHHHHHHHhCC-Ce-ecC----------------CCCCCeEEEEeCCcc-hHHHHHHHHHHC--CceEE----ee
Q 040324 374 IRENSNFFRSKLQKMG-FE-VLG----------------DNDSPVMPIMVYNPA-KVSSFSRECLKQ--NVAIV----TV 428 (488)
Q Consensus 374 ~~~~~~~l~~~L~~~g-~~-~~~----------------~~~~~~~~~~~~~~~-~~~~~~~~l~~~--Gi~v~----~~ 428 (488)
..+++..+.+.|++.. +. |.- ...+.++.+.+.... ....|.+.|.=- |..+- -+
T Consensus 260 ~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi 339 (386)
T PF01053_consen 260 QNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLI 339 (386)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EE
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCccccc
Confidence 9999999999998762 11 111 123468888887765 566676666411 11100 01
Q ss_pred cCCCc--------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 429 GFPAT--------------PLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 429 ~~~~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.+|.. ...++.+|+++. -||.+.+++.|+++++
T Consensus 340 ~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG----lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 340 SHPASTSHRSLSPEERAEAGISDGLIRLSVG----LEDPDDLIADLEQALE 386 (386)
T ss_dssp EETTCTTTTTSCHHHHHHTTS-TTEEEEE------SS-HHHHHHHHHHHHH
T ss_pred ccccchhhccCChhhhhccCCCCCeeEEEec----cCCHHHHHHHHHHhcC
Confidence 11211 112468999985 3566777777777654
No 328
>PRK04311 selenocysteine synthase; Provisional
Probab=99.77 E-value=5.8e-16 Score=157.53 Aligned_cols=321 Identities=15% Similarity=0.124 Sum_probs=197.3
Q ss_pred CCccchHHHHHHHHHcCCCC-CCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCC
Q 040324 116 ADEYCTPRVIDSLKKYSHST-CSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLN 194 (488)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~-~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~ 194 (488)
-++.+.+++.+.+..+.... .... ....+.+..+++.+|+++|.++++++++|+.|+..++.+ ..+|+.|++....
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~--g~~g~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e 174 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLAT--GKRGSRDRALAALLCALTGAEDALVVNNNAAAVLLALNA-LAAGKEVIVSRGE 174 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhh--cccchHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence 35778888888877653111 0000 012344679999999999999999999999888766655 4788888887764
Q ss_pred chH------HHHHHHhcCCeEEEeeCC---CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC--CCC--CCCChHH
Q 040324 195 HNS------IVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS--MEG--ELCKLPE 261 (488)
Q Consensus 195 h~~------~~~~~~~~g~~v~~~~~~---d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s--~~G--~~~~l~~ 261 (488)
|.. +...++..|++++.++.+ +++++++.|.+ .++ +|+++...+ +.| ...++++
T Consensus 175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~------------~Tk-lV~~vh~sN~~i~G~~~~~dl~e 241 (464)
T PRK04311 175 LVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINE------------NTA-LLLKVHTSNYRIEGFTKEVSLAE 241 (464)
T ss_pred hhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCc------------cCe-EEEEEcCCCccccccCCcCCHHH
Confidence 432 223466789999888764 67778877754 234 444444333 445 4679999
Q ss_pred HHHHHHHcCcEEEEEccccccccCCCCCC----cchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHHhhCCC
Q 040324 262 IITICKRYKAYTYLDEAHSIGAVGKTGRG----VCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLKYNCPA 336 (488)
Q Consensus 262 l~~l~~~~g~~li~DE~~s~g~~g~~g~~----~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~~~~~~ 336 (488)
|+++|++||+++|+|..++ .++..+.. .......-..++|+++.|.+|.+|++. |++++++++++.++....
T Consensus 242 I~~lak~~gi~vivD~gsG--~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li~~l~~~~~- 318 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGSG--SLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELIARLKKHPL- 318 (464)
T ss_pred HHHHHHHcCCeEEEECCCc--ccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHHHHHhhchh-
Confidence 9999999999999999643 44322110 000011111456999999999998654 999999999987763221
Q ss_pred CcccCCCCHHHHHHHHHHHHHHhccCC-C------chHHHHHHHHHHHHHHHHHHHHhCC---C--eecCC----CC---
Q 040324 337 HLYATSISPPAAEQIISAIQVVIGEDG-S------CRGAQKLARIRENSNFFRSKLQKMG---F--EVLGD----ND--- 397 (488)
Q Consensus 337 ~~~~~~~~p~~~aa~~a~L~~i~~~~~-~------~~~~~~~~~~~~~~~~l~~~L~~~g---~--~~~~~----~~--- 397 (488)
.-.....-..+++..++|....+... . .......+++.++++.+.+.|+... + .+... .+
T Consensus 319 -~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~ 397 (464)
T PRK04311 319 -KRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSL 397 (464)
T ss_pred -HHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCC
Confidence 11111223344444455543321100 0 0122234667778888888887642 2 33221 00
Q ss_pred ----CCeEEEEeCC-cchHHHHHHHHHHC--CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 398 ----SPVMPIMVYN-PAKVSSFSRECLKQ--NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 398 ----~~~~~~~~~~-~~~~~~~~~~l~~~--Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
-+-+.+.+.. .....++.+.|++- .|+.+. .++.+.+-+ -++.++|++.+++++.+++.
T Consensus 398 p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~--------~~~~~~ld~-r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 398 PVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGRI--------EDGRLLLDL-RTLEEEDEERLAAALLEALN 463 (464)
T ss_pred cCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE--------ECCEEEEEe-CcCCHHHHHHHHHHHHHHhh
Confidence 1333344432 23567888888875 344431 235677766 46789999999999988753
No 329
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.77 E-value=4.1e-16 Score=170.37 Aligned_cols=306 Identities=13% Similarity=0.110 Sum_probs=199.2
Q ss_pred hhhHHHHHHHHHHHhCCC--C-eEEeCC-cHHHHhhhhhcc-cCCCcEEEEeCCCchHHHHHHH---hcCCeEEEeeCC-
Q 040324 145 LALHNELEECVARFVGKP--A-AIVFGM-GYVTNSSILPVL-MGKGSLIISDSLNHNSIVNGAR---GSGATIRVFQHN- 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~--~-~i~~~s-Gs~a~~~~~~~~-~~~~~~Vl~~~~~h~~~~~~~~---~~g~~v~~~~~~- 215 (488)
.+..++.++.+|++++.+ + .+++++ .|+++..++..+ .++++.|++....|++...... ..|+++..++.+
T Consensus 77 ~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~ 156 (805)
T PLN02724 77 SDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEE 156 (805)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchh
Confidence 456789999999999973 3 355555 555554445554 5778999999899988775433 347788777643
Q ss_pred ----------CH----HHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHc--------CcEE
Q 040324 216 ----------TP----SHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRY--------KAYT 273 (488)
Q Consensus 216 ----------d~----~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~--------g~~l 273 (488)
++ ++|++.+++.+.... ....++.+|.+..+.+..|.+.|++.+.++++.. ++++
T Consensus 157 ~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~---~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v 233 (805)
T PLN02724 157 AANQPTNSQGSVVVKSRGLQRRNTSKLQKRE---DDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMV 233 (805)
T ss_pred ccccccccccccccchhhhhhhhhhhhcccc---ccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEE
Confidence 11 334443321010000 0011335788889999999999999775555532 3689
Q ss_pred EEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-cc-cEEEeCHHHHHHHHhhCCCC-c------------
Q 040324 274 YLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS-YG-GYIAGSKELIQYLKYNCPAH-L------------ 338 (488)
Q Consensus 274 i~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~~~~~~~~~~~~~~~~-~------------ 338 (488)
++|.+|++|... .++...++|++..|++|.+|+ .| |+++.+++..+.+.....+. +
T Consensus 234 ~vDaaQ~~g~~p---------iDv~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~ 304 (805)
T PLN02724 234 LLDAAKGCGTSP---------PDLSRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVK 304 (805)
T ss_pred EeehhhhcCCCC---------CChhhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceee
Confidence 999999966543 344444579999999999984 46 99988888877665321110 0
Q ss_pred --------c-cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-------CCeecCCC------
Q 040324 339 --------Y-ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-------GFEVLGDN------ 396 (488)
Q Consensus 339 --------~-~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-------g~~~~~~~------ 396 (488)
+ ..+.|.+..++..++++.+... ..+.+.++..++.+++.+.|+++ ++.++++.
T Consensus 305 ~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~i----g~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~ 380 (805)
T PLN02724 305 RRERVEQRFEDGTISFLSIAALRHGFKLLNRL----TISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEF 380 (805)
T ss_pred ccccHHHHhcCCCcchhHHHHHHHHHHHHHHh----ChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCc
Confidence 0 1135556666677788887421 34667788899999999999887 25666542
Q ss_pred --CCCeEEEEeCCcc----hHHHHHHHHHHCCceEEeecCCCcc--------------------------------CCCC
Q 040324 397 --DSPVMPIMVYNPA----KVSSFSRECLKQNVAIVTVGFPATP--------------------------------LLLA 438 (488)
Q Consensus 397 --~~~~~~~~~~~~~----~~~~~~~~l~~~Gi~v~~~~~~~~~--------------------------------~~~~ 438 (488)
.++++.+.+.... ...++...+-++||.++...+.+.+ ...+
T Consensus 381 ~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G 460 (805)
T PLN02724 381 HIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTG 460 (805)
T ss_pred ccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccc
Confidence 3466655553321 1233444344569999864332211 0127
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 439 RARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 439 ~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.+|+++...+|.+|||++++.|++.+-.
T Consensus 461 ~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 461 AVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred eEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999999997643
No 330
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=8.5e-17 Score=163.11 Aligned_cols=210 Identities=15% Similarity=0.204 Sum_probs=157.1
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHH----HHHhcCCeEEEee-CCCHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVN----GARGSGATIRVFQ-HNTPSH 219 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~----~~~~~g~~v~~~~-~~d~~~ 219 (488)
.+....+|+.+|++.|.+.+++++||++|+..++.++.++||.|++....|+++.. .+...|.++..++ .+|+++
T Consensus 68 ~pt~~~le~~la~l~g~~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~ 147 (437)
T PRK05613 68 NPTVEALENRIASLEGGVHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPES 147 (437)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHH
Confidence 45678999999999999999999999999887777778999999999989998743 3455688988886 457888
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
+++.+++ ++.+|+++...++.|.+.|+++|+++|+++|+++|+|.+++.+.+- . .+ .
T Consensus 148 l~~~l~~-------------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~~---~------p~-~ 204 (437)
T PRK05613 148 WQAAVQP-------------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAALV---R------PL-E 204 (437)
T ss_pred HHHhCCc-------------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcccccc---C------hH-H
Confidence 8887754 2335667888888899999999999999999999999999743321 1 11 1
Q ss_pred CCccEEEcccccccCCc----ccEEEeCHHH-----------------------------------H-HHHHhhCCCCcc
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAGSKEL-----------------------------------I-QYLKYNCPAHLY 339 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~~~~~-----------------------------------~-~~~~~~~~~~~~ 339 (488)
.++|+++.|++|.+++. ||+++.+.+. . +....... ..
T Consensus 205 ~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 282 (437)
T PRK05613 205 LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLR--DT 282 (437)
T ss_pred hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHH--hc
Confidence 24589999999999864 4766643220 0 00101111 23
Q ss_pred cCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC
Q 040324 340 ATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 340 ~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
+..++|..+..++..|+.+ ..+.++..+++..+.+.|++.
T Consensus 283 G~~~~p~~a~l~~rgl~TL---------~lR~~~~~~nA~~lA~~L~~h 322 (437)
T PRK05613 283 GATLSPFNAWVTAQGLDTL---------SLRLERHNENAIKVAEFLNNH 322 (437)
T ss_pred CCCCCHHHHHHHHcccCcH---------HHHHHHHHHHHHHHHHHHHcC
Confidence 5568888888777777655 567888899999999999876
No 331
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.77 E-value=1.9e-16 Score=168.85 Aligned_cols=298 Identities=16% Similarity=0.119 Sum_probs=194.6
Q ss_pred CCChhhHHHHHHHHHHHhCCCCeEEe-CCcHHHHhhhhhccc--------CCCcEEEEeCCCchHHHHHHHhcCCeEEEe
Q 040324 142 GGTLALHNELEECVARFVGKPAAIVF-GMGYVTNSSILPVLM--------GKGSLIISDSLNHNSIVNGARGSGATIRVF 212 (488)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~~~i~~-~sGs~a~~~~~~~~~--------~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~ 212 (488)
.|+.+...++++.+++++|.+.+-+. ++|+.++.+.+.++. ..+++|+++...|++....+...|.+++.+
T Consensus 539 QG~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~V 618 (954)
T PRK12566 539 EGYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIV 618 (954)
T ss_pred cCHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEe
Confidence 35666778999999999999876444 478777744433322 235789999999988877788889999998
Q ss_pred eCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 213 QHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 213 ~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
+.+ |+++|++++++. + .+.++|++....+.++...++++|+++|+++|+++++|.+|..+..+..
T Consensus 619 p~D~~G~iDle~L~a~I~~~---------~-~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~ 688 (954)
T PRK12566 619 ECDPDGNVDLDDLKAKAAAA---------G-DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLA 688 (954)
T ss_pred ccCCCCCcCHHHHHHHhhcc---------C-CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCC
Confidence 874 899999998742 1 1455665544444444445799999999999999999999975443311
Q ss_pred CCCcchhcCCCCCCccEEEcccccccCC------cc-cEEEeCHHHHHHHHhhCC-------CCccc----CCCCHHHHH
Q 040324 288 GRGVCELLGVDTSDVDIMMGTFSKSFGS------YG-GYIAGSKELIQYLKYNCP-------AHLYA----TSISPPAAE 349 (488)
Q Consensus 288 g~~~~~~~~v~p~~~di~~~t~sK~~g~------~G-g~i~~~~~~~~~~~~~~~-------~~~~~----~~~~p~~~a 349 (488)
.....+.|++.++++|+|++ +| |.+...+.+...+..... +...+ ..++...+.
T Consensus 689 --------~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~ 760 (954)
T PRK12566 689 --------RPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILP 760 (954)
T ss_pred --------ChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHH
Confidence 01123458999999999963 22 555666666666553210 00011 112222233
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC-CCCCe---EEEEeCC-----cchHHHHHHHHHH
Q 040324 350 QIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD-NDSPV---MPIMVYN-----PAKVSSFSRECLK 420 (488)
Q Consensus 350 a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~---~~~~~~~-----~~~~~~~~~~l~~ 420 (488)
+++.-++.+ +.+ ..+..+....+++|++++|.+ ++++.-. ...++ +.+.+.. .....++.++|++
T Consensus 761 ~A~~Yi~~l----G~e-Lk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d 834 (954)
T PRK12566 761 ISWMYIAMM----GPQ-LADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMD 834 (954)
T ss_pred HHHHHHHHH----CHH-HHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHH
Confidence 333334433 222 333334446689999999977 4443222 11222 2222221 1345689999999
Q ss_pred CCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 421 QNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 421 ~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
.||......||. .+.+|++|+...|++|||++++++..+.++.
T Consensus 835 ~Gihapt~~fPv----~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 835 YGFHAPTMSFPV----PGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred CCcEEeEEeecc----CCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 899876554442 4789999999999999999999999988774
No 332
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.77 E-value=5.7e-16 Score=166.31 Aligned_cols=298 Identities=16% Similarity=0.150 Sum_probs=202.7
Q ss_pred CChhhHHHHHHHHHHHhCCCC-eEEeCCcHHHHhh---hhhccc-----CCCcEEEEeCCCchHHHHHHHhcCCeEEEee
Q 040324 143 GTLALHNELEECVARFVGKPA-AIVFGMGYVTNSS---ILPVLM-----GKGSLIISDSLNHNSIVNGARGSGATIRVFQ 213 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~-~i~~~sGs~a~~~---~~~~~~-----~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~ 213 (488)
|..+...++++.|++++|.+. .+..++|+.++.+ +++... .++++|+++...|++....+...|.+++.++
T Consensus 527 G~lq~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~ 606 (939)
T TIGR00461 527 GYQELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVN 606 (939)
T ss_pred HHHHHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEec
Confidence 556777899999999999985 4555667766643 344321 3457899999999999888999999999988
Q ss_pred CC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC-hHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 214 HN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK-LPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 214 ~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~-l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
.+ |+++|+++++++ +. +.++|++....+ .|.+.+ +++|+++|+++|.++++|.++..+..+..
T Consensus 607 ~d~~G~iDle~L~~~i~~~---------~~-~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~ 675 (939)
T TIGR00461 607 CDQDGNIDLVDLKNKAEQH---------GD-ELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLT 675 (939)
T ss_pred cCCCCCcCHHHHHHHHhhc---------CC-ceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCC
Confidence 64 899999999752 11 344555533333 577776 99999999999999999999974333311
Q ss_pred CCCcchhcCCCCCCccEEEcccccccC------Ccc-cEEEeCHHHHHHHHhhCC-------------CCccc-CCCCHH
Q 040324 288 GRGVCELLGVDTSDVDIMMGTFSKSFG------SYG-GYIAGSKELIQYLKYNCP-------------AHLYA-TSISPP 346 (488)
Q Consensus 288 g~~~~~~~~v~p~~~di~~~t~sK~~g------~~G-g~i~~~~~~~~~~~~~~~-------------~~~~~-~~~~p~ 346 (488)
.....+.|++.++.+|+|+ ++| |+++.++++...+....- +.+.+ ..++..
T Consensus 676 --------~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~ 747 (939)
T TIGR00461 676 --------SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSAS 747 (939)
T ss_pred --------CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHH
Confidence 1112346899999999885 233 899988776554421100 00111 123444
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCC-CCCeE---EEEeCC-----cchHHHHHHH
Q 040324 347 AAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN-DSPVM---PIMVYN-----PAKVSSFSRE 417 (488)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~~---~~~~~~-----~~~~~~~~~~ 417 (488)
.+..+...|..+ +.+...+..+....+++|+.++|++ ++++.-+. .++++ .+.+.. .....++.++
T Consensus 748 ~~l~a~~yi~~l----G~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakr 822 (939)
T TIGR00461 748 ILPISWMYIKMM----GNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKR 822 (939)
T ss_pred HHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHH
Confidence 444555566655 4445667777788899999999987 55554332 22322 222221 1356789999
Q ss_pred HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 418 CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 418 l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
|++.|+..-...||. .+.+-|+|.-..|++|||++++++.++.++..
T Consensus 823 L~d~G~hapt~~~pv----~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 823 LQDYGFHAPTLSFPV----PGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred HHhCCeeccccCCcc----CCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999764444442 23677888889999999999999988877653
No 333
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.76 E-value=3.1e-15 Score=148.93 Aligned_cols=300 Identities=13% Similarity=0.129 Sum_probs=195.4
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH-HHhcCCeEEEe-----------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG-ARGSGATIRVF----------- 212 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~-~~~~g~~v~~~----------- 212 (488)
++-..+||+.+++++|.+.++.++||+.|+..+....+++||.| +...|..+..+ +...|+...-+
T Consensus 77 d~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~ 154 (460)
T PRK13237 77 SRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSD 154 (460)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccC
Confidence 34457999999999999999999999999866666678899975 55556666555 66677754433
Q ss_pred ---eCC-CHHHHHHHHHHHHhcCCCCCCCCCceEEEE-EcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEcccccccc
Q 040324 213 ---QHN-TPSHLEEVLREQIAEGQPRTRRPWKKIMVV-VEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAV 284 (488)
Q Consensus 213 ---~~~-d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi-~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~ 284 (488)
+.| |++.|++.|++.. +..+.++. +-+++..+|..+ +++++.++|++||+.||.|.++.+|..
T Consensus 155 ~p~tgnlD~d~Le~~I~~~~---------~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna 225 (460)
T PRK13237 155 HPFKGNVDLDKLQALIDEVG---------AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENA 225 (460)
T ss_pred CCCCCCcCHHHHHHHhcccc---------CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcCh
Confidence 112 8999999987521 11222222 223444446554 689999999999999999999986622
Q ss_pred --------CCCCCCcc----hhcCCCCCCccEEEcccccccCCc-ccEEEe-CHHHHHHHHhhCC---CC-cccCCCCHH
Q 040324 285 --------GKTGRGVC----ELLGVDTSDVDIMMGTFSKSFGSY-GGYIAG-SKELIQYLKYNCP---AH-LYATSISPP 346 (488)
Q Consensus 285 --------g~~g~~~~----~~~~v~p~~~di~~~t~sK~~g~~-Gg~i~~-~~~~~~~~~~~~~---~~-~~~~~~~p~ 346 (488)
|..++... +.+. -.|+++.|++|.++.+ ||+++. ++++.+.++...- ++ +|+ +++.-
T Consensus 226 ~fI~~re~~y~~~~i~ei~~e~~s----~aD~~t~S~~K~~~~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tyg-g~~gr 300 (460)
T PRK13237 226 YFIKEREEGYQDKSIKEIVHEMFS----YADGCTMSGKKDCLVNIGGFLAMNDEELFDEAKELVVVYEGMPSYG-GMAGR 300 (460)
T ss_pred hhhcccccccCCCcHhHHhhhccC----cCcEEEEeCCCCCCCCCceEEEECCHHHHHHHHHhccccCCCcCCC-Chhhh
Confidence 22333221 2221 2388888999999764 677765 5788888876532 21 232 12111
Q ss_pred HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCC--------cchHHHHHHHH
Q 040324 347 AAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYN--------PAKVSSFSREC 418 (488)
Q Consensus 347 ~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l 418 (488)
-+.+.-..|... ...+..++-.++.++|.+.|.+.|++++.+.+++.+.+.... .-....++.+|
T Consensus 301 d~~alAvgl~E~-------~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~l 373 (460)
T PRK13237 301 DMEAMAIGIEES-------VQYEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAEL 373 (460)
T ss_pred HHHHHHhHHHhh-------chHHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHH
Confidence 222221233322 123666666778899999999999999988888766664311 11455777777
Q ss_pred HHC-CceEEeecC------CCccCC----CCeEEEeecCC-CCHHHHHHHHHHHHHHHHHh
Q 040324 419 LKQ-NVAIVTVGF------PATPLL----LARARICISAS-HTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 419 ~~~-Gi~v~~~~~------~~~~~~----~~~iRi~~~~~-~t~edid~~l~~l~~~~~~~ 467 (488)
..+ ||-.+..|. |.+... -..+|+++|-- -|.+++|...+++..+.+.-
T Consensus 374 y~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 434 (460)
T PRK13237 374 YIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHR 434 (460)
T ss_pred HHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHhH
Confidence 766 887664331 111110 25799998644 68999999999999987653
No 334
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.76 E-value=2.1e-17 Score=160.48 Aligned_cols=220 Identities=20% Similarity=0.194 Sum_probs=154.3
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCc-HHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeC---------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMG-YVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH--------- 214 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sG-s~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~--------- 214 (488)
.....++++.+|+++|.++++++++| ++++..++.+++++||.|+++.++|.++..++...|++++.++.
T Consensus 58 ~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~ 137 (294)
T cd00615 58 TGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIA 137 (294)
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcC
Confidence 34568999999999999888876666 45678888888999999999999999999999999998877642
Q ss_pred --CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcc
Q 040324 215 --NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVC 292 (488)
Q Consensus 215 --~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~ 292 (488)
.|++++++.+++. +..++++++.+. ..|.+.++++|+++|+++|+++|+||+|+.. +...+....
T Consensus 138 ~~i~~~~l~~~l~~~----------~~~k~v~l~~p~--~~G~~~dl~~I~~~~~~~g~~livDeA~~~~-~~~~~~~~~ 204 (294)
T cd00615 138 GGIPPETFKKALIEH----------PDAKAAVITNPT--YYGICYNLRKIVEEAHHRGLPVLVDEAHGAH-FRFHPILPS 204 (294)
T ss_pred CCCCHHHHHHHHHhC----------CCceEEEEECCC--CCCEecCHHHHHHHHHhcCCeEEEECcchhh-hccCcccCc
Confidence 2788898888652 225666766553 4799999999999999999999999999731 111111111
Q ss_pred hhcCCCCCCccEEEcccccccCCc--ccEEEeCHHH--HHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHH
Q 040324 293 ELLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKEL--IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGA 368 (488)
Q Consensus 293 ~~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~--~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~ 368 (488)
. ....+.|+++.|++|++++. ||++..+.+. .+.+..... ...+++.+.+.+++..++++.+.. +..
T Consensus 205 ~---~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~-~~~ttsps~~~~asl~~a~~~~~~-----~g~ 275 (294)
T cd00615 205 S---AAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALN-LHQSTSPSYLILASLDVARAMMAL-----EGK 275 (294)
T ss_pred c---hhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHH-HHCCCCcHHHHHHHHHHHHHHHHH-----HhH
Confidence 1 11135699999999999753 3555444331 122222111 112234566666777777776621 346
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 040324 369 QKLARIRENSNFFRSKLQ 386 (488)
Q Consensus 369 ~~~~~~~~~~~~l~~~L~ 386 (488)
+..+++.++.+++++.|+
T Consensus 276 ~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 276 ELVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 678888889999998875
No 335
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.76 E-value=1.3e-16 Score=159.11 Aligned_cols=312 Identities=14% Similarity=0.121 Sum_probs=195.8
Q ss_pred CCCCCCccchHHHHHHHHHcCCCCCCcccCCC-----ChhhHHHHHHHHHHHhCC--CC-eEEeCC-cHHHHhhhhhccc
Q 040324 112 GFAAADEYCTPRVIDSLKKYSHSTCSSRVDGG-----TLALHNELEECVARFVGK--PA-AIVFGM-GYVTNSSILPVLM 182 (488)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g-----~~~~~~~l~~~la~~~g~--~~-~i~~~s-Gs~a~~~~~~~~~ 182 (488)
|....++.|.+|+.+.+..++ +........+ .....+++++.++++++. +. ++++++ ||+++.+++..+.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~ 84 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLL 84 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC
Confidence 444447888888888886654 2221111111 125678999999999995 23 555544 8888877777776
Q ss_pred C---CCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHH-HHHHHHHhcCCCCCCCCCceEEEEEcCcCCC
Q 040324 183 G---KGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLE-EVLREQIAEGQPRTRRPWKKIMVVVEGIYSM 252 (488)
Q Consensus 183 ~---~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le-~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~ 252 (488)
. +++.|++....|.+ ...++..|.++..++.+ +..+++ ..+. +..+ +|.+...-+.
T Consensus 85 ~~~~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~------------~~~~-lV~~~h~~t~ 150 (355)
T cd00611 85 GDKGTADYVVTGAWSAKA-AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA------------PDAA-YVHYCSNETI 150 (355)
T ss_pred CCCCeEEEEECCHHHHHH-HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC------------CCCC-EEEEeCCccc
Confidence 5 55666553322222 33445667777777643 212222 1111 1233 4555555555
Q ss_pred CCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHH
Q 040324 253 EGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLK 331 (488)
Q Consensus 253 ~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~ 331 (488)
+|.+. .++++.||+++++|.+|++|... ++.++.|+++.+..|.+|.+| |+++.++++.+.+.
T Consensus 151 tG~~~-----~~i~~~~g~~~~VDa~qs~g~~~-----------idv~~~~~~~ss~~K~lGP~G~g~l~~~~~~~~~~~ 214 (355)
T cd00611 151 HGVEF-----DEVPDTGGVPLVADMSSNILSRP-----------IDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKAR 214 (355)
T ss_pred ccEEc-----ceecccCCCeEEEEccccccCCC-----------CCHHHhCEEEeecccccCCCceEEEEECHHHHhhcc
Confidence 67652 24556699999999999976653 332334556667899999888 99999998887654
Q ss_pred hhCCC-----------CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCC--C
Q 040324 332 YNCPA-----------HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFE-VLGD--N 396 (488)
Q Consensus 332 ~~~~~-----------~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~--~ 396 (488)
..... ..+ .+.|.....+..++|+.+.... ..+.+.++.+++.++++++|+++ |+. ...+ .
T Consensus 215 ~~~~~~~~~~~~~~~~~~~-~Tpn~~~i~~L~aal~~l~~~g---g~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~ 290 (355)
T cd00611 215 KITPSMLNYKTHADNNSLY-NTPPTFAIYMMGLVLKWLKEQG---GVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRA 290 (355)
T ss_pred cCCCCcccHHHHHhcCCCC-CCChHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHH
Confidence 32110 011 1244556677778999885321 35778889999999999999999 752 2111 1
Q ss_pred CC-CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 397 DS-PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 397 ~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.+ .++.+.+.......++...+.++|+. .+.++. ..+.+|+++...+|+||||+++++|+++
T Consensus 291 rs~~vvsf~~~~~~l~~~~~~~~~r~G~~-~~~~~~----~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 291 RSRMNVPFRLGKEELEKEFLKEAEAAGMI-GLKGHR----SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cCceEEEEEcCChhhhHHHHHHHHHCCCc-ccCCCc----ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 23 33555544321124555678888997 443332 1268999999999999999999999885
No 336
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.76 E-value=5.1e-16 Score=153.81 Aligned_cols=312 Identities=13% Similarity=0.070 Sum_probs=199.1
Q ss_pred CccchHHHHHHHHHcCCCCCCcccC-CCCh---hhHHHHHHHHHHHhCCC---CeEEeC-CcHHHHhhhhhcccCCCcEE
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVD-GGTL---ALHNELEECVARFVGKP---AAIVFG-MGYVTNSSILPVLMGKGSLI 188 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~-~g~~---~~~~~l~~~la~~~g~~---~~i~~~-sGs~a~~~~~~~~~~~~~~V 188 (488)
|..+.+++.+.+..+.....+.... .... ...+++++.+.++++.+ ++++++ |||.++.+++..+..+++.+
T Consensus 4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~ 83 (349)
T TIGR01364 4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVA 83 (349)
T ss_pred CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeE
Confidence 4567888888877654211111111 1122 56688999999999952 365664 58889988888887777765
Q ss_pred EEeC-CCchH-HHHHHHhcCCeEEEee------CCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChH
Q 040324 189 ISDS-LNHNS-IVNGARGSGATIRVFQ------HNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLP 260 (488)
Q Consensus 189 l~~~-~~h~~-~~~~~~~~g~~v~~~~------~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~ 260 (488)
++-. +.++. ....++..|. +..+. ..+..++++...+ +..+ +|.+-..=+.+|...+
T Consensus 84 l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-~v~~th~ETstGv~~~-- 148 (349)
T TIGR01364 84 DYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEIS-----------EDAA-YVHYCANETIHGVEFR-- 148 (349)
T ss_pred EEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCCC-----------CCCC-EEEEcCCCCcccEecc--
Confidence 5443 33332 2334555677 55544 2234444432211 1123 3433333344565544
Q ss_pred HHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHHhhCC----
Q 040324 261 EIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLKYNCP---- 335 (488)
Q Consensus 261 ~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~~~~~---- 335 (488)
++++.+++++++|.++++|+.. ++.++.|+++.|..|.+|.+| |+++.+++..+.+.....
T Consensus 149 ---~l~~~~~~l~iVDavss~g~~~-----------id~~~~d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~~~ 214 (349)
T TIGR01364 149 ---ELPDVKNAPLVADMSSNILSRP-----------IDVSKFGLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSMLN 214 (349)
T ss_pred ---eecccCCCeEEEEccccccCcc-----------CCHHHccEEEEecccccCCCceEEEEECHHHHhhcccCCCCcch
Confidence 6777789999999999966543 333445788999999999888 999999988876533210
Q ss_pred -------CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCC---CCC-CeEEE
Q 040324 336 -------AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGD---NDS-PVMPI 403 (488)
Q Consensus 336 -------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~---~~~-~~~~~ 403 (488)
...+ .+.|-....+..++|+.+..+. ..+++.++.+++.+++++.|+++ |+..... ..+ .++.+
T Consensus 215 ~~~~~~~~~~~-~Tp~~~~i~al~~al~~l~~~g---G~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf 290 (349)
T TIGR01364 215 YKIHAENDSMY-NTPPTFAIYVSGLVFKWLKEQG---GVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVF 290 (349)
T ss_pred HHHHHhcCCCC-CCCcHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEE
Confidence 1111 1345556677778999885321 36788999999999999999999 5643321 123 34555
Q ss_pred EeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 404 MVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 404 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.+.......++...+.++|+.+. .++. ..+.+|+++...+|+||||+++++|+++.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~Gi~~~-~~~~----~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 291 TLGNEELEKRFLKEAEERGLVSL-KGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred ecCChhHhHHHHHHHHHCCCccc-CCcc----ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 54433223567778888999443 2222 1258999999999999999999999987653
No 337
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.76 E-value=1.4e-15 Score=154.26 Aligned_cols=325 Identities=18% Similarity=0.201 Sum_probs=196.3
Q ss_pred cCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEE
Q 040324 111 LGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIIS 190 (488)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~ 190 (488)
+|.+.-++.+.+++.+.++.|+... ...........+..+++.+|+++|.+.++++++|+.|+..++.. ..+|+.|++
T Consensus 88 lg~s~l~~~vieAv~~~~~~y~~l~-~~l~~g~~g~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~-l~~GdeVIv 165 (454)
T TIGR00474 88 LGRAPLAEEAIEAVTDAARGYSNLE-YDLETGKRGSRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNT-LAKGKEVIV 165 (454)
T ss_pred CCCCCCCHHHHHHHHHHHhcccchh-ccccccccchHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH-hCCcCEEEE
Confidence 3444446888999999888764211 00000012345689999999999999999999999998766644 578888888
Q ss_pred eCCCchH------HHHHHHhcCCeEEEeeCC---CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCCCCC--CCCC
Q 040324 191 DSLNHNS------IVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYSMEG--ELCK 258 (488)
Q Consensus 191 ~~~~h~~------~~~~~~~~g~~v~~~~~~---d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s~~G--~~~~ 258 (488)
....|.. +...++..|++++.++++ +++++++++.+ ++++++++ .+.+++.| .+.+
T Consensus 166 s~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~~~~l~dle~aI~~------------~T~lv~~~h~sN~~~~G~~~~~d 233 (454)
T TIGR00474 166 SRGELVEIGGSFRIPDVMEQSGAKLVEVGTTNRTHLKDYEDAITE------------NTALLLKVHTSNYRIVGFTEEVS 233 (454)
T ss_pred CCChhhhhcchhhHHHHHHHcCCEEEEeCCCCCCCHHHHHHhcCc------------CCEEEEEEccCcccccCCCCCCC
Confidence 8766532 234567789999999863 67788877653 23433333 34455567 5789
Q ss_pred hHHHHHHHHHcCcEEEEEccccccccCCCCC-Ccc-h--hcCCCCCCccEEEcccccccCCc-ccEEEeCHHHHHHHHhh
Q 040324 259 LPEIITICKRYKAYTYLDEAHSIGAVGKTGR-GVC-E--LLGVDTSDVDIMMGTFSKSFGSY-GGYIAGSKELIQYLKYN 333 (488)
Q Consensus 259 l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~-~~~-~--~~~v~p~~~di~~~t~sK~~g~~-Gg~i~~~~~~~~~~~~~ 333 (488)
+++|+++|++||+++++|.. .|.++..+. +.. + .......++|+++.|.+|.+|++ +|+++++++.++.++..
T Consensus 234 l~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~~~i~~l~~~ 311 (454)
T TIGR00474 234 IAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKKELIERLKKN 311 (454)
T ss_pred HHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECHHHHHhhhhc
Confidence 99999999999999999964 345544332 110 0 01111245699999999999865 59999999888776532
Q ss_pred CCCCcccCCCCHHHHHHHHHHHHHHhccCC-------CchHHHHHHHHHHHHHHHHHHHHhC---CC--eecCCC----C
Q 040324 334 CPAHLYATSISPPAAEQIISAIQVVIGEDG-------SCRGAQKLARIRENSNFFRSKLQKM---GF--EVLGDN----D 397 (488)
Q Consensus 334 ~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~---g~--~~~~~~----~ 397 (488)
.. .-.....-...++..+++....+... ........+++.+++..+.+.|++. ++ .+.... +
T Consensus 312 ~l--~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gg 389 (454)
T TIGR00474 312 PL--TRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGG 389 (454)
T ss_pred hh--HHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccC
Confidence 11 11101222233333444443321100 0011223456667777777777663 22 222211 0
Q ss_pred -------CCeEEEEeCC-cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHH
Q 040324 398 -------SPVMPIMVYN-PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVI 460 (488)
Q Consensus 398 -------~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (488)
-+-+.+.+.. .....++.+.|++....+.. . ..++.+.+-+ -++.++|++.+++++
T Consensus 390 g~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~-r-----~~~~~~~ld~-r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 390 GSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIG-R-----IEDDRFLLDL-RTLLEDEEELLIEAL 453 (454)
T ss_pred CCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEE-E-----EECCEEEEEe-CcCCHHHHHHHHHHh
Confidence 1333344422 23567888888876533331 0 1235676766 467889999888876
No 338
>PLN02263 serine decarboxylase
Probab=99.75 E-value=2.5e-15 Score=151.03 Aligned_cols=291 Identities=14% Similarity=0.049 Sum_probs=194.9
Q ss_pred ChhhHHHHHHHHHHHhCCCC----eEEeCCcHHHHhhhhhcccC--CCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--
Q 040324 144 TLALHNELEECVARFVGKPA----AIVFGMGYVTNSSILPVLMG--KGSLIISDSLNHNSIVNGARGSGATIRVFQHN-- 215 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~----~i~~~sGs~a~~~~~~~~~~--~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-- 215 (488)
..+...++-+.+++++|.+. .+++++||++|+.++.+... +..+++++...|.++..++++.|.+++.++.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~ 210 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVS 210 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCC
Confidence 34444556666667777532 58888899999665544422 34578889999999999999999998888854
Q ss_pred ---CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCc-----EEEEEccccccccCCC
Q 040324 216 ---TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKA-----YTYLDEAHSIGAVGKT 287 (488)
Q Consensus 216 ---d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~-----~li~DE~~s~g~~g~~ 287 (488)
|+++|++.|.+.. ...++|+...-..+.|.+.|+++|.++|+++|+ ||++|.+++...+ +.
T Consensus 211 g~mD~~aL~~aI~~d~----------~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~l-Pf 279 (470)
T PLN02263 211 GEIDCADFKAKLLANK----------DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMM-PF 279 (470)
T ss_pred CcCcHHHHHHHHHhCC----------CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHh-hh
Confidence 8999999887631 123344333333367999999999999999997 9999999972222 11
Q ss_pred CCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhC-----CCCcccCCCCHHHHHHHHHHHHHHhc
Q 040324 288 GRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNC-----PAHLYATSISPPAAEQIISAIQVVIG 360 (488)
Q Consensus 288 g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~-----~~~~~~~~~~p~~~aa~~a~L~~i~~ 360 (488)
.+.... ++.. ..+|-+..+.+|.++.+- |+++.+++..+.+.... ...+...+-+.......+.+|+.+
T Consensus 280 ~~~~~~-~df~-~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~-- 355 (470)
T PLN02263 280 VKRAPK-VTFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK-- 355 (470)
T ss_pred cccccc-cCCC-cCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHh--
Confidence 111111 2221 227888889999998643 77777765554432210 001111122222345566777765
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeE
Q 040324 361 EDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARA 440 (488)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~i 440 (488)
+.+...+..++..++++++.+.|++.|+.....+.+..+.+. .+. ..+..+|..+... .+.+
T Consensus 356 --G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~--~p~------~~~~~~gW~L~~~--------~~~~ 417 (470)
T PLN02263 356 --GYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFE--RPK------DEEFVRRWQLACQ--------GNIA 417 (470)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEe--cCc------hHHhhcceEEccC--------CCcE
Confidence 445677888888999999999999999887766655554332 221 1123467766531 1469
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 441 RICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 441 Ri~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
++++...+|++.+|++++.|++.....
T Consensus 418 Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 418 HVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 999888889999999999998887643
No 339
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.75 E-value=9.1e-16 Score=167.63 Aligned_cols=298 Identities=17% Similarity=0.157 Sum_probs=189.6
Q ss_pred CChhhHHHHHHHHHHHhCCCCeEEeC-CcHHHHhh---hhhcc-cCC----CcEEEEeCCCchHHHHHHHhcCCeEEEee
Q 040324 143 GTLALHNELEECVARFVGKPAAIVFG-MGYVTNSS---ILPVL-MGK----GSLIISDSLNHNSIVNGARGSGATIRVFQ 213 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~-sGs~a~~~---~~~~~-~~~----~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~ 213 (488)
|..+...++.+.+++++|.+.+-+.. +|++++.+ +++.+ ..+ .++|+++...|++....+...|.+++.++
T Consensus 539 G~l~~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~ 618 (954)
T PRK05367 539 GYRELIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVA 618 (954)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEEC
Confidence 35566789999999999998755554 45555533 33332 123 34799999999999999999999999988
Q ss_pred CC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCC-CCChHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 214 HN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGE-LCKLPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 214 ~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~-~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
.+ |+++|++.+++. +.+.++|++...... |. ..++++|+++|+++|+++++|.+|..+.++..
T Consensus 619 ~d~~G~iD~~~L~~~i~~~----------~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~ 687 (954)
T PRK05367 619 CDENGNIDLDDLRAKAEEH----------ADNLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGLA 687 (954)
T ss_pred CCCCCCcCHHHHHHHHhcc----------CCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCCC
Confidence 64 788998888652 013344444322222 44 46899999999999999999999975444322
Q ss_pred CCCcchhcCCCCCCccEEEcccccccCC------cc-cEEEeCHHHHHHHHhhCC---CC--cccC-CCCHH----HHHH
Q 040324 288 GRGVCELLGVDTSDVDIMMGTFSKSFGS------YG-GYIAGSKELIQYLKYNCP---AH--LYAT-SISPP----AAEQ 350 (488)
Q Consensus 288 g~~~~~~~~v~p~~~di~~~t~sK~~g~------~G-g~i~~~~~~~~~~~~~~~---~~--~~~~-~~~p~----~~aa 350 (488)
- .. ..+.|++.++.+|+|+. +| |++..++.+...+..... .. ..+. ...+. .+..
T Consensus 688 ~---pg-----~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~ 759 (954)
T PRK05367 688 R---PG-----DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPI 759 (954)
T ss_pred C---hh-----hcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHH
Confidence 0 00 13358999999999853 33 778777665544432110 00 0011 11122 1111
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCee--cCCCCC--CeEEEEe---CC--cchHHHHHHHHHHC
Q 040324 351 IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEV--LGDNDS--PVMPIMV---YN--PAKVSSFSRECLKQ 421 (488)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~--~~~~~~~---~~--~~~~~~~~~~l~~~ 421 (488)
++..+..+ +.+...+..++...+++|+.++|++. +++ .++.+. .-+.+.+ .. .....++.++|.+.
T Consensus 760 a~~yi~~~----G~~Glr~~a~~~~~~A~Yl~~~L~~~-~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~ 834 (954)
T PRK05367 760 SWMYIRMM----GAEGLRQATEVAILNANYIAKRLKDH-YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDY 834 (954)
T ss_pred HHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHhh-cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHC
Confidence 22333333 44445555666668999999999773 333 221111 1111112 11 13467899999999
Q ss_pred CceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 422 NVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 422 Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
|+......||. .+.++|+|.-..|++|||++++++..+.++..
T Consensus 835 G~~~~t~~~pv----~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 835 GFHAPTMSFPV----AGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred CCeEeecCCcc----CCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 99876544442 46899999999999999999999998877653
No 340
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.75 E-value=1.3e-15 Score=151.62 Aligned_cols=314 Identities=14% Similarity=0.104 Sum_probs=200.3
Q ss_pred CCCCCCccchHHHHHHHHHcC-----CCCCCcccCCCChhhHHHHHHHHHHHhCC-C--CeEEe-CCcHHHHhhhhhccc
Q 040324 112 GFAAADEYCTPRVIDSLKKYS-----HSTCSSRVDGGTLALHNELEECVARFVGK-P--AAIVF-GMGYVTNSSILPVLM 182 (488)
Q Consensus 112 g~~~~~~~v~~a~~~~l~~~~-----~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~--~~i~~-~sGs~a~~~~~~~~~ 182 (488)
|...-++.+.+|+.+.+..++ ....+.|. .-..+..++.++.++++++. + +++++ +||+.++++++..+.
T Consensus 10 GP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~-~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~ 88 (360)
T PRK05355 10 GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRS-KEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL 88 (360)
T ss_pred CCCCCCHHHHHHHHHHhhccccCCccccccCCCC-HHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC
Confidence 444446778888777765432 11111110 01126778999999999995 2 24444 567777788887777
Q ss_pred CCCcEEEEe-CCCchHH-HHHHHhcCCeEEEeeCC------CHHHHHH-HHHHHHhcCCCCCCCCCceEEEEEcCcCCCC
Q 040324 183 GKGSLIISD-SLNHNSI-VNGARGSGATIRVFQHN------TPSHLEE-VLREQIAEGQPRTRRPWKKIMVVVEGIYSME 253 (488)
Q Consensus 183 ~~~~~Vl~~-~~~h~~~-~~~~~~~g~~v~~~~~~------d~~~Le~-~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~ 253 (488)
.+++.+++- .+.++.. ...++..|.. ..+... +..++++ .+++ +.+ +|.+-..=+.+
T Consensus 89 ~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~------------~~~-~V~~th~eTst 154 (360)
T PRK05355 89 GGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSD------------DAA-YVHYTSNETID 154 (360)
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCC------------CCC-EEEEccCCCcc
Confidence 776654443 3333322 3345555654 333211 2334444 3322 123 44444444556
Q ss_pred CCCC-ChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHH
Q 040324 254 GELC-KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLK 331 (488)
Q Consensus 254 G~~~-~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~ 331 (488)
|... ++++| +|+++++|.++++|+.. ++.++.|+++.|..|.+|.+| |+++.+++..+.+.
T Consensus 155 Gv~~~~i~~i------~g~l~vVDavss~g~~~-----------idv~~~d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~ 217 (360)
T PRK05355 155 GTEFHELPDT------GDVPLVADMSSDILSRP-----------IDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRAL 217 (360)
T ss_pred eEecCccccc------CCCcEEEEcCccccCcc-----------CCHHHccEEEEeccccccCCceEEEEECHHHHhhcc
Confidence 7775 66666 89999999999966542 333445788999999999888 99999998887764
Q ss_pred hh-C----------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCe-ecCC--CC
Q 040324 332 YN-C----------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFE-VLGD--ND 397 (488)
Q Consensus 332 ~~-~----------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~~--~~ 397 (488)
.. . ...+. .+.|-....+..++|+.+..+. ..+++.++.+++.++++++|+++|+. ...+ ..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~-~Tp~~~~i~aL~~aL~~i~~~g---G~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~r 293 (360)
T PRK05355 218 PSIPSMLDYKTHADNDSMY-NTPPTFAIYLAGLVFKWLKEQG---GVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDR 293 (360)
T ss_pred cCCChHHHHHHHHhcCCcc-CCCcHHHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhc
Confidence 41 1 11111 2355566677778999885320 36788899999999999999999852 2121 23
Q ss_pred C-CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 398 S-PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 398 ~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
+ .++.+.+.......++...+.++|+.+. .++. ..+.+|+++...+|.||||+++++|++++..
T Consensus 294 s~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~-~~~~----~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 294 SRMNVPFTLADEELDKKFLAEAKAAGLVGL-KGHR----SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CCcEEEEEcCChHHHHHHHHHHHHCCCccc-CCCC----ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 4 3455655544334567788888999974 2321 1367999999999999999999999997754
No 341
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.75 E-value=4.8e-16 Score=155.01 Aligned_cols=289 Identities=13% Similarity=0.065 Sum_probs=186.6
Q ss_pred ChhhHHHHHHHHHHHhCCC---CeEEe-CCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhc---CCeEEEeeCCC
Q 040324 144 TLALHNELEECVARFVGKP---AAIVF-GMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGS---GATIRVFQHNT 216 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~---~~i~~-~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~---g~~v~~~~~~d 216 (488)
..+..++.++.++++++.+ .++++ +|||.++..++..+..++ .+.+....|++...-.... ..++..++...
T Consensus 39 f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~~-~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~ 117 (361)
T TIGR01366 39 VKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEKK-SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP 117 (361)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhccccc-ccEEecCHHHHHHHHHHHhhhccCCceEEecCC
Confidence 3566789999999999973 24554 457888877776665433 3344456665543332211 23444544322
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcC
Q 040324 217 PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLG 296 (488)
Q Consensus 217 ~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~ 296 (488)
.+.++..+. + +..+|.+-..-+..|.+.|+++| ++++|+++++|.++++|... .+
T Consensus 118 ~~~~~~~~~------------~-~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~---------id 172 (361)
T TIGR01366 118 GSAPEPQAD------------P-GVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLP---------VD 172 (361)
T ss_pred CCCCCCccC------------C-CCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCC---------CC
Confidence 122222111 1 33456666666777988898887 58899999999999966542 23
Q ss_pred CCCCCccEEEcccccccCCcc--cEEEeCHHHHHHHHhhCCC--------------------CcccCCCCHHHHHHHHHH
Q 040324 297 VDTSDVDIMMGTFSKSFGSYG--GYIAGSKELIQYLKYNCPA--------------------HLYATSISPPAAEQIISA 354 (488)
Q Consensus 297 v~p~~~di~~~t~sK~~g~~G--g~i~~~~~~~~~~~~~~~~--------------------~~~~~~~~p~~~aa~~a~ 354 (488)
+ +++|+++.|..|++|+++ ++++.+++..+.+.....+ .+. .+.+.....+..++
T Consensus 173 v--~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~-~tp~i~~i~~l~~a 249 (361)
T TIGR01366 173 I--AETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTY-NTPAIATLALLAEQ 249 (361)
T ss_pred H--HHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCC-CCchHHHHHHHHHH
Confidence 3 347999999999999865 4456688777665532110 011 12333444566788
Q ss_pred HHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCCC---CCCeEEE-EeCCcchHHHHHHHHHHCCceEEeec
Q 040324 355 IQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDN---DSPVMPI-MVYNPAKVSSFSRECLKQNVAIVTVG 429 (488)
Q Consensus 355 L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~l~~~Gi~v~~~~ 429 (488)
++.+.... ..+...++.+++.+++++.|++.+ +...... .++.++. .+.......++.+.|.++||.+.+ +
T Consensus 250 l~~l~~~g---g~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~-~ 325 (361)
T TIGR01366 250 IDWMNGNG---GLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTE-P 325 (361)
T ss_pred HHHHHHcc---CHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeecc-C
Confidence 88885321 246677899999999999999997 3443221 2334333 333334667898999889999864 2
Q ss_pred CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 430 FPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 430 ~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+ ...+...+|+++...+|.+|+++++++|+++++++
T Consensus 326 ~--~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 326 Y--RKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred c--cccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 2 22334689999999999999999999999987653
No 342
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.72 E-value=1e-15 Score=150.96 Aligned_cols=329 Identities=19% Similarity=0.231 Sum_probs=189.2
Q ss_pred ceeEEe-ccccccCCCCCCccchHHHHHHH-HHcCCCCCCcccCCCChhhHHH----HHHHHHHHhCCC----C-eEEeC
Q 040324 100 SRCLNL-GSYNYLGFAAADEYCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNE----LEECVARFVGKP----A-AIVFG 168 (488)
Q Consensus 100 ~~~ld~-~s~~~lg~~~~~~~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~----~-~i~~~ 168 (488)
++.|++ .|-|++ .|.+.++....+ .+|..++.+.|.+.|. +...+ ..+++.++++.+ . .+-.-
T Consensus 20 ~~~l~LiaSEN~~-----Sp~v~~al~S~l~nkyaeg~pg~ryy~G~-~~id~iE~la~~ra~~lF~~~~~~w~anvqp~ 93 (399)
T PF00464_consen 20 RSTLNLIASENYM-----SPAVREALGSDLTNKYAEGYPGKRYYGGC-EYIDEIEELAIERAKELFGAEPKEWYANVQPH 93 (399)
T ss_dssp HHSEE-CTT----------HHHHHHHTSGGGGS-TTEETTEESSSST-HHHHHHHHHHHHHHHHHHT-STTTEEEE---S
T ss_pred hcCccccCccccc-----CHHHHHHhCCcceeeccccCCCcccccCc-chhhHHHHHHHHHHHHHhCCCcccceEEeecC
Confidence 456777 333331 244444433332 2344445555555443 44433 344555677876 3 45567
Q ss_pred CcHHHHhhhhhcccCCCcEEEEeCCCchHHHH---H--H-----HhcCCeEEEeeCC------CHHHHHHHHHHHHhcCC
Q 040324 169 MGYVTNSSILPVLMGKGSLIISDSLNHNSIVN---G--A-----RGSGATIRVFQHN------TPSHLEEVLREQIAEGQ 232 (488)
Q Consensus 169 sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~---~--~-----~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~ 232 (488)
||+.||.++..++++|||.|+.-+..|+.... . . .........++.+ |.+.+++.+++.
T Consensus 94 SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~----- 168 (399)
T PF00464_consen 94 SGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEH----- 168 (399)
T ss_dssp SHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH-----
T ss_pred CchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhc-----
Confidence 99999999999999999999987766544321 1 1 1112345555533 899999998874
Q ss_pred CCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccc
Q 040324 233 PRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKS 312 (488)
Q Consensus 233 p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~ 312 (488)
+.+.+|+-.+.|... .++++++++|++.|++|++|-+|..|-.. .|. ... .+ +..|++.+|.+|+
T Consensus 169 ------kPklIi~G~S~y~~~---~d~~~~reIad~vga~l~~D~sH~~GLIa-~g~-~~~--P~--~~ADvvt~sThKt 233 (399)
T PF00464_consen 169 ------KPKLIICGASSYPRP---IDFKRFREIADEVGAYLMADISHIAGLIA-GGL-FPN--PF--PYADVVTGSTHKT 233 (399)
T ss_dssp --------SEEEEE-SSTSS------HHHHHHHHHHTT-EEEEE-TTTHHHHH-TTS-S----GC--CTSSEEEEESSGG
T ss_pred ------CCCEEEECchhccCc---cCHHHHHHHHHhcCcEEEeccccccccee-hhe-ecC--cc--ccceEEEeecccc
Confidence 134344445555443 47999999999999999999999765443 111 111 12 2369999999999
Q ss_pred cCC-cccEEEeC--------------HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 040324 313 FGS-YGGYIAGS--------------KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIREN 377 (488)
Q Consensus 313 ~g~-~Gg~i~~~--------------~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (488)
|.+ -||.|+.+ +++.+.+...-.+...+ +.+.-..++...+|+... ....++..+++.+|
T Consensus 234 l~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg-~~h~~~iaalAval~ea~----~~~fk~Ya~qVv~N 308 (399)
T PF00464_consen 234 LRGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQG-GPHMHRIAALAVALKEAL----SPEFKEYAKQVVKN 308 (399)
T ss_dssp G-SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-S-S--HHHHHHHHHHHHHHT----SHHHHHHHHHHHHH
T ss_pred ccccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCccc-CcchhHHHHHHHHHhccc----CHHHHHHHHHHHHH
Confidence 954 57999999 88888887654433332 133333444334555432 23568899999999
Q ss_pred HHHHHHHHHhCCCeecC-CCCCCeEEEEeCCcc-hHHHHHHHHHHCCceEEeecCCCc--cCCCCeEEEeecCC----CC
Q 040324 378 SNFFRSKLQKMGFEVLG-DNDSPVMPIMVYNPA-KVSSFSRECLKQNVAIVTVGFPAT--PLLLARARICISAS----HT 449 (488)
Q Consensus 378 ~~~l~~~L~~~g~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~l~~~Gi~v~~~~~~~~--~~~~~~iRi~~~~~----~t 449 (488)
++.|.+.|.+.|+.+.. ...++++.+.+.... ...+..+.|.+.||.+.....|.. +...+.+||..+.. ..
T Consensus 309 Ak~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~ 388 (399)
T PF00464_consen 309 AKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMK 388 (399)
T ss_dssp HHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--
T ss_pred HHHHHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCC
Confidence 99999999999999874 334588888875433 455666777777999986443432 23346899986533 45
Q ss_pred HHHHHHHHHH
Q 040324 450 KEDLIEALEV 459 (488)
Q Consensus 450 ~edid~~l~~ 459 (488)
++|+.++.+.
T Consensus 389 e~dm~~iA~~ 398 (399)
T PF00464_consen 389 EEDMKEIAEL 398 (399)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 6777666554
No 343
>PRK15029 arginine decarboxylase; Provisional
Probab=99.72 E-value=3.6e-15 Score=157.98 Aligned_cols=303 Identities=15% Similarity=0.109 Sum_probs=199.0
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------- 215 (488)
.....+.++..|+.+|.++.+|+++||++ |.+++.+.+++||+|+++..+|-|...++.++|+.++.+...
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~ 283 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIG 283 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 34558899999999999999999999886 578888899999999999999999999999999999887521
Q ss_pred --C-----HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccc-cccCCC
Q 040324 216 --T-----PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSI-GAVGKT 287 (488)
Q Consensus 216 --d-----~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~-g~~g~~ 287 (488)
+ ++.++++|+++-..... ..++..++|++.|.| .|.+.++++|+++|++++++|++||||.. ..|.+
T Consensus 284 ~i~~~~~~~e~i~~~l~~~p~~k~~--~~~~~~avvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~- 358 (755)
T PRK15029 284 PIYPQEMQPETLQKKISESPLTKDK--AGQKPSYCVVTNCTY--DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNP- 358 (755)
T ss_pred CCCccccCHHHHHHHHHhCchhhhc--cccCceEEEEECCCC--cceeeCHHHHHHHHHhcCCeEEEECccccccccCc-
Confidence 3 78898888764210000 001234788887777 48888999999999999999999999972 22322
Q ss_pred CCCcchhcCC-----CCCCcc-EEEcccccccCCc--ccEEEeCHH--HH--HHHHhhCCCCcccCCCCHHHHHHHHHHH
Q 040324 288 GRGVCELLGV-----DTSDVD-IMMGTFSKSFGSY--GGYIAGSKE--LI--QYLKYNCPAHLYATSISPPAAEQIISAI 355 (488)
Q Consensus 288 g~~~~~~~~v-----~p~~~d-i~~~t~sK~~g~~--Gg~i~~~~~--~~--~~~~~~~~~~~~~~~~~p~~~aa~~a~L 355 (488)
....+..+ ...+.| +++-|.+|.+++. ++++-.+.. .+ +.++..-. ...++|.+-+.+|..-.+.
T Consensus 359 --~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~-~~qSTSPSY~LmASLD~ar 435 (755)
T PRK15029 359 --IYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYM-MHATTSPLYAICASNDVAV 435 (755)
T ss_pred --cccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHH-HHcCCCcHHHHHHHHHHHH
Confidence 11111222 113456 8889999999762 355533211 11 22322111 1123445556666655555
Q ss_pred HHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCC-------------------------------------------ee
Q 040324 356 QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGF-------------------------------------------EV 392 (488)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~-------------------------------------------~~ 392 (488)
+.+.. +..+++.++..+....|++.++++.- .+
T Consensus 436 ~~m~~----~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (755)
T PRK15029 436 SMMDG----NSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWV 511 (755)
T ss_pred HHHhh----hhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhhhccccceee
Confidence 55531 13567788888888889988876521 11
Q ss_pred cCC--C--C-----------CC-eEEEEeCC-cc---------hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecC
Q 040324 393 LGD--N--D-----------SP-VMPIMVYN-PA---------KVSSFSRECLKQNVAIVTVGFPATPLLLARARICISA 446 (488)
Q Consensus 393 ~~~--~--~-----------~~-~~~~~~~~-~~---------~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~ 446 (488)
..+ . + -+ -+.+.... .. .+..+.+.|.++||.+.-.+ ...+-+.++.
T Consensus 512 ~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~-------~~~vL~l~s~ 584 (755)
T PRK15029 512 MHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT-------DFQIMFLFSM 584 (755)
T ss_pred ecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC-------CCeEEEEeCC
Confidence 111 0 0 00 01111100 01 12368888877799988532 2457777788
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 040324 447 SHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 447 ~~t~edid~~l~~l~~~~~~ 466 (488)
..|++++++++++|.++-+.
T Consensus 585 g~t~~~~~~L~~aL~~~~~~ 604 (755)
T PRK15029 585 GVTRGKWGTLVNTLCSFKRH 604 (755)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999987543
No 344
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.72 E-value=1.3e-14 Score=149.89 Aligned_cols=281 Identities=16% Similarity=0.162 Sum_probs=178.6
Q ss_pred eEEeCCcHHHHhhhhhcc----c----------------------CCCcEEEEeCCCchHHHHHHHhcCC---eEEEeeC
Q 040324 164 AIVFGMGYVTNSSILPVL----M----------------------GKGSLIISDSLNHNSIVNGARGSGA---TIRVFQH 214 (488)
Q Consensus 164 ~i~~~sGs~a~~~~~~~~----~----------------------~~~~~Vl~~~~~h~~~~~~~~~~g~---~v~~~~~ 214 (488)
.+++++||+||+.++.+. . .++..|+++...|.++..+++..|. +++.++.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 577889999995533221 1 0245788999999999999888876 5666665
Q ss_pred C-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCC
Q 040324 215 N-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 215 ~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~ 289 (488)
+ |+++|++.|++...++. ...+|+.....+..|.+.|+++|.++|+++|+++++|.+|+.+.+- ...
T Consensus 242 d~~g~~d~~~L~~~i~~~~~~g~-------~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~-~~~ 313 (522)
T TIGR03799 242 DANNRIDVDALRDKCAELAEQNI-------KPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLL-SNT 313 (522)
T ss_pred CCCCcCCHHHHHHHHHHHHHCCC-------CcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHh-CHH
Confidence 4 89999999986544321 2233333333446799999999999999999999999999832221 000
Q ss_pred CcchhcCCCCCCccEEEcccccccCC-cc-cEEEe-CHHHHHHHHhhCC-----------CCcccCCCCHHHHHHHHHHH
Q 040324 290 GVCELLGVDTSDVDIMMGTFSKSFGS-YG-GYIAG-SKELIQYLKYNCP-----------AHLYATSISPPAAEQIISAI 355 (488)
Q Consensus 290 ~~~~~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~-~~~~~~~~~~~~~-----------~~~~~~~~~p~~~aa~~a~L 355 (488)
.-...-++ ..+|.+..+.+|.+++ .| |+++. +++..+.+..... .+++..+-+ ..+....++|
T Consensus 314 ~r~~l~gl--e~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~-~~al~lw~aL 390 (522)
T TIGR03799 314 YRHLLKGI--ERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRP-GMAMLVYAGL 390 (522)
T ss_pred HHHHhcCc--hhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcc-hHHHHHHHHH
Confidence 00001233 2468999999997754 44 76655 4555555433100 011111122 2222466777
Q ss_pred HHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEeCCcc----------------------hHH
Q 040324 356 QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPA----------------------KVS 412 (488)
Q Consensus 356 ~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~----------------------~~~ 412 (488)
+.+ +....++++++..+++++|.+.|++. +++++.++...++.+.+.... ...
T Consensus 391 ~~l----G~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~ 466 (522)
T TIGR03799 391 HII----GRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTK 466 (522)
T ss_pred HHH----hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHH
Confidence 776 33467889999999999999999887 888887765566665543210 112
Q ss_pred HHHHHHHHCCceEEe-ecC-CCc--cCCCCeEEEee-cCCCCHHHHHHHHHH
Q 040324 413 SFSRECLKQNVAIVT-VGF-PAT--PLLLARARICI-SASHTKEDLIEALEV 459 (488)
Q Consensus 413 ~~~~~l~~~Gi~v~~-~~~-~~~--~~~~~~iRi~~-~~~~t~edid~~l~~ 459 (488)
.+.+++.+.|..... ... +.. ..+...+|+++ +...|++||+.+++-
T Consensus 467 ~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 467 FIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred HHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 566677777776653 110 111 11225799997 556788999987763
No 345
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.69 E-value=2.3e-15 Score=149.04 Aligned_cols=224 Identities=23% Similarity=0.250 Sum_probs=152.2
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------- 215 (488)
.....+.++.+|+.+|.++.+++++||.. |.+++.+++++||.|+++..+|-|+..++.++|+.++.++..
T Consensus 65 ~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~ 144 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIG 144 (417)
T ss_dssp BTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BE
T ss_pred ccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCcc
Confidence 34557889999999999999999999886 588889999999999999999999999999999998877531
Q ss_pred --CH-----HHHHHHHHHHHhcCCCCCCCCCceE---EEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccC
Q 040324 216 --TP-----SHLEEVLREQIAEGQPRTRRPWKKI---MVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 216 --d~-----~~Le~~l~~~~~~~~p~~~~~~~~~---~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
++ +.++++|++. |..++ +||+.|.| .|.+.++++|.++|++++++|++||||+. -++
T Consensus 145 ~i~~~~~~~~~i~~~l~~~----------p~~k~~~~vvlt~PTY--~Gv~~di~~I~~~~h~~~~~llvDEAhGa-h~~ 211 (417)
T PF01276_consen 145 GISPDEFNEEDIEEALKEH----------PDAKAPRLVVLTSPTY--YGVCYDIKEIAEICHKHGIPLLVDEAHGA-HFG 211 (417)
T ss_dssp EB-GGGGSHHHHHHHHHHC----------TTCHCESEEEEESS-T--TSEEE-HHHHHHHHCCTECEEEEE-TT-T-TGG
T ss_pred CCChhhhhHHHHHHHHHhC----------ccccCceEEEEeCCCC--CeEEECHHHHHHHhcccCCEEEEEccccc-ccc
Confidence 44 7888888874 23444 88887777 48888999999999999999999999972 222
Q ss_pred CCCCCcchh--cCCC--CCCccEEEcccccccCCc--ccEEEeCHHH---HHHHHhhCCCCcccCCCCHHHHHHHHHHHH
Q 040324 286 KTGRGVCEL--LGVD--TSDVDIMMGTFSKSFGSY--GGYIAGSKEL---IQYLKYNCPAHLYATSISPPAAEQIISAIQ 356 (488)
Q Consensus 286 ~~g~~~~~~--~~v~--p~~~di~~~t~sK~~g~~--Gg~i~~~~~~---~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~ 356 (488)
.. ...... .|.+ .+..++++-|.+|.+++. ++++-.+.+. .+.++..-. ...++|.+-+.+|..-.+.+
T Consensus 212 F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~-~~~TTSPSY~lmASlD~a~~ 289 (417)
T PF01276_consen 212 FH-PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALS-MHQTTSPSYPLMASLDVARA 289 (417)
T ss_dssp CS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHH-HHS-SS--HHHHHHHHHHHH
T ss_pred CC-CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHH-HHcCCChHHHHHHHHHHHHH
Confidence 22 111111 1221 122348899999999763 3666443321 233332111 12345566667766666666
Q ss_pred HHhccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 040324 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQK 387 (488)
Q Consensus 357 ~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (488)
.+.. ..++++.++..++...+|+.|++
T Consensus 290 ~m~~----~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 290 QMEE----EEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp HHSH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhh----hhhHHHHHHHHHHHHHHHHHHHh
Confidence 5511 25678889999999999999943
No 346
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=4e-14 Score=139.18 Aligned_cols=287 Identities=18% Similarity=0.215 Sum_probs=198.3
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHH
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHL 220 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~L 220 (488)
.+-...||+.+|++=|.+.++.++||..|...++..+.++||.|++....|+.+..- ....|.++..++..+.+.+
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~ 141 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEAL 141 (396)
T ss_pred CccHHHHHHHHHHhhCCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHH
Confidence 455689999999999999999999999999888999999999999998888876654 3345778887777677666
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTS 300 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~ 300 (488)
++++.+ .++.+|.+|+.-++.-.+.++++|+++++++|+++|+|...+-+.+-+ .+ +.
T Consensus 142 ~~~~~~------------~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~---------PL-~~ 199 (396)
T COG0626 142 EAAIKE------------PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR---------PL-EL 199 (396)
T ss_pred HHHhcc------------cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC---------hh-hc
Confidence 666653 145577789998999899999999999999999999999987433321 11 24
Q ss_pred CccEEEcccccccCCc----ccEEEeCH-HHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHH
Q 040324 301 DVDIMMGTFSKSFGSY----GGYIAGSK-ELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIR 375 (488)
Q Consensus 301 ~~di~~~t~sK~~g~~----Gg~i~~~~-~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~ 375 (488)
++||++.|.+|-+|+- ||+++++. ++.+.+...... ..+..++|.-+...+..|+.+ .-+.++..
T Consensus 200 GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~-~~G~~l~p~dA~l~lRGlkTL---------~~Rm~~~~ 269 (396)
T COG0626 200 GADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRA-NTGAVLSPFDAWLLLRGLRTL---------ALRMERHN 269 (396)
T ss_pred CCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHh-hcCCCCCHHHHHHHHhccchH---------HHHHHHHH
Confidence 4699999999999863 37777654 555544222221 244557888777777777765 56788888
Q ss_pred HHHHHHHHHHHhCC-C-eecCC----------------CCCCeEEEEeCCcchHHHHHHHHHHCCceEEe------ecCC
Q 040324 376 ENSNFFRSKLQKMG-F-EVLGD----------------NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVT------VGFP 431 (488)
Q Consensus 376 ~~~~~l~~~L~~~g-~-~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~------~~~~ 431 (488)
+|+..+.+.|++.. + .|.-| ..+.++.+.+.......+|.+.|.--.+..+- +.+|
T Consensus 270 ~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~p 349 (396)
T COG0626 270 ENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISHP 349 (396)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCcccccccc
Confidence 89999999998752 1 12211 14567777776654455666555421111110 1223
Q ss_pred Cc--------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 432 AT--------------PLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 432 ~~--------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+. ...++.+|+++.. ||++.+++-|+++++.+
T Consensus 350 a~~th~~~~~~~r~~~Gi~~~LvRlSVGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 350 ATMTHASIPLEERAKAGITDGLVRLSVGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred cccCcccCCHhHHHhcCCCCCeEEEEecC----CCHHHHHHHHHHHHHhh
Confidence 11 1135789999854 55666666666666543
No 347
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.68 E-value=1.1e-14 Score=145.38 Aligned_cols=238 Identities=14% Similarity=0.136 Sum_probs=166.6
Q ss_pred ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHH----HHHHhcCCeEEEeeCCCHHH
Q 040324 144 TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSH 219 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~----~~~~~~g~~v~~~~~~d~~~ 219 (488)
..+...+||+.++++.|.+.++.++||+.|+..++.++.++||.|++....|+.+. ..+...|.++..++.++.+.
T Consensus 62 ~~P~~~~lE~~la~leg~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~ 141 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNS 141 (384)
T ss_pred CChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhh
Confidence 34667899999999999999999999999988888888999999999877666554 33555688888887665554
Q ss_pred HHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 220 Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
++ +.. .+..+|++|.+-++.+.+.++++|.++|++++ +++|.+++.+..+ +. .+
T Consensus 142 ~~--l~~------------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~---~p----l~--- 195 (384)
T PRK06434 142 LD--FDP------------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQ---NP----LD--- 195 (384)
T ss_pred ee--ecC------------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccC---Cc----hh---
Confidence 44 221 13457778999888899999999999999998 4679998532222 11 11
Q ss_pred CCccEEEcccccccCCc----ccEEEe-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFGSY----GGYIAG-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374 (488)
Q Consensus 300 ~~~di~~~t~sK~~g~~----Gg~i~~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~ 374 (488)
...|+++.|.+|.+++. ||+++. ++++.+.++.... .++..++|..++.++..|+.+ +.++++.
T Consensus 196 ~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~--~~G~~~~~~~A~l~~~gL~tL---------~~R~~r~ 264 (384)
T PRK06434 196 LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK--TLGSNPDPIQAYLALRGLKTL---------GLRMEKH 264 (384)
T ss_pred cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHH--hcCCCCCHHHHHHHHhCCCcH---------HHHHHHH
Confidence 23589999999999752 477766 5666666654322 234457888777777766654 6788888
Q ss_pred HHHHHHHHHHHHhCC-C-eecC----------CCCCCeEEEEeCCcchHHHHHHHH
Q 040324 375 RENSNFFRSKLQKMG-F-EVLG----------DNDSPVMPIMVYNPAKVSSFSREC 418 (488)
Q Consensus 375 ~~~~~~l~~~L~~~g-~-~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l 418 (488)
.+++..+.+.|+... + .|.- ...+.++.+.+.......+|.+.|
T Consensus 265 ~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l 320 (384)
T PRK06434 265 NKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNL 320 (384)
T ss_pred HHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhC
Confidence 999999999998762 1 1111 123567777775433333444443
No 348
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.66 E-value=1.4e-16 Score=152.54 Aligned_cols=256 Identities=19% Similarity=0.174 Sum_probs=167.8
Q ss_pred CCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCc
Q 040324 116 ADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNH 195 (488)
Q Consensus 116 ~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h 195 (488)
.+|.+.+++.++.... ..||..+...+|++.+++++|.+.++++.+|+.||..++++++.|++.|++..+.|
T Consensus 7 ~~~~m~~a~~~a~~gd--------~~Yg~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aH 78 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGD--------DAYGEDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAH 78 (290)
T ss_dssp S-HHEEHHHHHTTSB---------CCTTSSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEH
T ss_pred CCHHHHHHHHccccCC--------cccCCChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccce
Confidence 3678888884432111 13578899999999999999999999999999999999999999999999999998
Q ss_pred hHHHHH---HHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCC-CCCCCC---ChHHHH
Q 040324 196 NSIVNG---ARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYS-MEGELC---KLPEII 263 (488)
Q Consensus 196 ~~~~~~---~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s-~~G~~~---~l~~l~ 263 (488)
...... ...+|.++..++.. |+++|++.++.... |.+ ...+|.++.... .+|.+. .|++|.
T Consensus 79 i~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~------h~~-~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 79 IHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGA------HHP-QPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp HHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTG------TSG-GEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred eeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccc------cCC-CccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 765432 35689999888743 79999999987532 222 344555544443 356655 488999
Q ss_pred HHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc-ccEEEeCHHHHHHHHhhCCCCccc--
Q 040324 264 TICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-GGYIAGSKELIQYLKYNCPAHLYA-- 340 (488)
Q Consensus 264 ~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-Gg~i~~~~~~~~~~~~~~~~~~~~-- 340 (488)
++|++||+.|++|.+.-.......+....++. ..+|++..|++|.+|.+ |++++++++.++............
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~----~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~~~~~~k~~gg~~~ 227 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAAAALGVSLAEIA----AGADSVSFGGTKNGGAPGGAVLAGNKEFIAKARRQRKRLGGGMR 227 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH----TTSSEEEEETTSTT-SSSEEEEEESHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHhCceEEEEehhhHHHhhhcccccHHHHh----hhCCEEEEEEEcccccccceEEEechHHHHHHHHHHHHhccCee
Confidence 99999999999999964222211112233443 34588889999999874 588899999765443322110000
Q ss_pred CCCCHHHHHH--HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC
Q 040324 341 TSISPPAAEQ--IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND 397 (488)
Q Consensus 341 ~~~~p~~~aa--~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 397 (488)
..+ .+.+.. ...++..++ .......+..++.+.|.+.|+.++..+..+..
T Consensus 228 ~~G-~~~a~~~~~~~~l~~l~------~~~~~~~~~~~~A~~La~~l~~~~~~~~~~~~ 279 (290)
T PF01212_consen 228 QAG-VLAAAELYQFAALRALE------LWLERARHANAMAKRLAAGLEALGGVLPRPVE 279 (290)
T ss_dssp HTT-HHHHHHHHHHHHHCHEE------CSHHHHHCHHHHHHCHHHCHHEECEEEETTSS
T ss_pred ecc-eeeeechhhHHHHHHHH------hhHHHHHHHHHHHHHHHHHHHHCCCcccCCCC
Confidence 011 111100 112222221 22466677888899999999998877655443
No 349
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=4.1e-14 Score=129.19 Aligned_cols=335 Identities=14% Similarity=0.134 Sum_probs=198.3
Q ss_pred eEEeccccccCCCCCCccchHHHHHHHHHc------CCCCCCcccCCCChhhHHHHHHHHHHHhCC---CCeEEeCCcHH
Q 040324 102 CLNLGSYNYLGFAAADEYCTPRVIDSLKKY------SHSTCSSRVDGGTLALHNELEECVARFVGK---PAAIVFGMGYV 172 (488)
Q Consensus 102 ~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~------~~~~~~~~~~~g~~~~~~~l~~~la~~~g~---~~~i~~~sGs~ 172 (488)
.++++++|+.-+ |++.+..++...+. ....|-.....|.....+.|.+.+-+.+|- ++.+.+|+||+
T Consensus 32 ~imLggGNPa~i----Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQ 107 (417)
T COG3977 32 AIMLGGGNPARI----PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQ 107 (417)
T ss_pred ceeeCCCCcccC----hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCcc
Confidence 566665444333 45555555544432 111111111225544555555555555554 57999999999
Q ss_pred HH-hhhhhcccC-----CCcEEEE-eCCCchHHHHHHHhcCCeEEEee-------------CCCHHHHHHHHHHHHhcCC
Q 040324 173 TN-SSILPVLMG-----KGSLIIS-DSLNHNSIVNGARGSGATIRVFQ-------------HNTPSHLEEVLREQIAEGQ 232 (488)
Q Consensus 173 a~-~~~~~~~~~-----~~~~Vl~-~~~~h~~~~~~~~~~g~~v~~~~-------------~~d~~~Le~~l~~~~~~~~ 232 (488)
.. ..++..+.+ ..+.|+. -.|.|-.+..+. +-.-..+.++ |-|.++|+- .
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~-l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i--~------- 177 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG-LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI--G------- 177 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhccccccc-cCccceeeccCCcccccccceeeccCHHHccc--c-------
Confidence 87 445554443 2234444 356665543321 1111112222 225555432 1
Q ss_pred CCCCCCCceEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCCCCC---CcchhcCCCCCCccEEE
Q 040324 233 PRTRRPWKKIMVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGKTGR---GVCELLGVDTSDVDIMM 306 (488)
Q Consensus 233 p~~~~~~~~~~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~---~~~~~~~v~p~~~di~~ 306 (488)
..+.+|++.-..+++|.+. .+.+|-+++++||+.||.|.+|+. ...+- .+...| .++-|++
T Consensus 178 ------e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~---PFP~iifsd~~~~w----~~NiilC 244 (417)
T COG3977 178 ------ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV---PFPGIIFSDATPLW----NENIILC 244 (417)
T ss_pred ------cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC---CCCceecccccccC----CCCEEEE
Confidence 2566777776677777655 488999999999999999999973 22121 112223 3346777
Q ss_pred cccccccCCcc---cEEEeCHHHHHHHHhhCCCCc-ccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHH
Q 040324 307 GTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHL-YATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFR 382 (488)
Q Consensus 307 ~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~-~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (488)
.|+||. |.+| |.+++++++++.+.....-.. ..+.+.|..++-++..=+.++ -..+-...=.+++.+...+.++
T Consensus 245 ~SLSK~-GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~r-lseqVIrPFY~~~~q~~~~~l~ 322 (417)
T COG3977 245 MSLSKL-GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLR-LSEQVIRPFYRNRVQTTIAILR 322 (417)
T ss_pred eehhhc-CCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHH-HHHHhhhHHHHHHHHHHHHHHH
Confidence 899995 7777 999999999999976543111 112233444443333222210 0000011223455566666677
Q ss_pred HHHHhCCCeecCCCCCCeEEEEeCC-cchHHHHHHHHHHCCceEEeec--CCCc----cCCCCeEEEeecCCCCHHHHHH
Q 040324 383 SKLQKMGFEVLGDNDSPVMPIMVYN-PAKVSSFSRECLKQNVAIVTVG--FPAT----PLLLARARICISASHTKEDLIE 455 (488)
Q Consensus 383 ~~L~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~--~~~~----~~~~~~iRi~~~~~~t~edid~ 455 (488)
+.|.+..+.+..+.+.-+.|+++.+ +....+++++|+++|++++|.. ||.. |..+.++|++. .-+++.|+.
T Consensus 323 ~~lp~~~~~iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~--~~~~~~ie~ 400 (417)
T COG3977 323 RYLPEYRCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNY--VPEPEKIEK 400 (417)
T ss_pred HhcCccceeeecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEec--CCCHHHHHH
Confidence 7776667777777766666777754 4567799999999999999943 3332 44567899966 788999999
Q ss_pred HHHHHHHHHHHh
Q 040324 456 ALEVISRIGDLV 467 (488)
Q Consensus 456 ~l~~l~~~~~~~ 467 (488)
.+.+|.+.+++.
T Consensus 401 Gva~lae~ve~~ 412 (417)
T COG3977 401 GVAILAEEVERA 412 (417)
T ss_pred HHHHHHHHHHHH
Confidence 999999988765
No 350
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.66 E-value=2.7e-14 Score=134.54 Aligned_cols=162 Identities=22% Similarity=0.266 Sum_probs=130.3
Q ss_pred CCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHH----HHhcCCeE
Q 040324 134 STCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG----ARGSGATI 209 (488)
Q Consensus 134 ~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~----~~~~g~~v 209 (488)
++..+|... |-...||+++|.+=|.-..+.+.||..|...++..+.++||.|++...-|+.+... ++..|.++
T Consensus 53 G~iYsRi~N---PT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v 129 (426)
T COG2873 53 GNIYTRIMN---PTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEV 129 (426)
T ss_pred CceeeeccC---chHHHHHHHHHHhhcchhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEE
Confidence 444455443 44588999999998877889999998888889999999999999988777776554 45669999
Q ss_pred EEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCC
Q 040324 210 RVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 210 ~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~ 289 (488)
..++.+|++.+++.+++ ++.+|.+|.+-++.+.+.++++|.++|+++|++||+|...+-..+-
T Consensus 130 ~fvd~~d~~~~~~aI~~-------------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl~---- 192 (426)
T COG2873 130 RFVDPDDPENFEAAIDE-------------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYLC---- 192 (426)
T ss_pred EEeCCCCHHHHHHHhCc-------------ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCcceec----
Confidence 99999999999999986 4557888999999999999999999999999999999987632221
Q ss_pred CcchhcCCCCCCccEEEcccccccCCcc----cEEE
Q 040324 290 GVCELLGVDTSDVDIMMGTFSKSFGSYG----GYIA 321 (488)
Q Consensus 290 ~~~~~~~v~p~~~di~~~t~sK~~g~~G----g~i~ 321 (488)
. .+ ..+.||++.|.+|.+|+-| |+|+
T Consensus 193 ---r--P~-~hGADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 193 ---R--PI-EHGADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred ---c--hh-hcCCCEEEEeecccccCCccccceEEE
Confidence 1 11 1455999999999998744 6554
No 351
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.65 E-value=2.7e-13 Score=142.34 Aligned_cols=293 Identities=16% Similarity=0.162 Sum_probs=196.0
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------- 215 (488)
.....+.++..|+.+|.++.+++++||++ |..++.+++++||.|+++..+|-|...++.++|+.++.++..
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g 273 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILG 273 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCCcc
Confidence 44568999999999999999999999775 678888899999999999999999999999999999887521
Q ss_pred -------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccc-cccCCC
Q 040324 216 -------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSI-GAVGKT 287 (488)
Q Consensus 216 -------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~-g~~g~~ 287 (488)
+.+.+++.|++. |... +..++||+.+.| .|.+.+++.|.++|+.++ |++||||.. ..|.+.
T Consensus 274 ~I~~~~~~~e~i~~~i~~~-----p~ak--~p~~~vit~pTY--dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 274 GIPQSEFQHATIAKRVKET-----PNAT--WPVHAVITNSTY--DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred CCCccccCHHHHHHHHHhC-----cccc--CccEEEEECCCC--ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 267888888763 2111 123578887766 488889999999999887 689999972 122221
Q ss_pred CC--CcchhcCCCCCCccEEEcccccccCCcc--cEEEe----C-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHH
Q 040324 288 GR--GVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAG----S-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVV 358 (488)
Q Consensus 288 g~--~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~----~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i 358 (488)
-. .+.. .+-++++..+++-|.+|.+++.- +++-. + +.+-+.+.. ..++|.+-+.+|..-.+...+
T Consensus 343 ~~~~sam~-~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m-----~~STSPsY~l~ASLD~a~~~m 416 (714)
T PRK15400 343 YEGKCGMS-GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMM-----HTTTSPHYGIVASTETAAAMM 416 (714)
T ss_pred cCCcChhh-cCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHH-----HcCCCcHHHHHHHHHHHHHHH
Confidence 11 1111 23333333488899999997522 33211 1 222222221 123445556666655555555
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHHHHHhC-C------CeecCCCC----------------------------CCe-EE
Q 040324 359 IGEDGSCRGAQKLARIRENSNFFRSKLQKM-G------FEVLGDND----------------------------SPV-MP 402 (488)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g------~~~~~~~~----------------------------~~~-~~ 402 (488)
.+. ..+++.++..+.+..+|+.|.++ + +.+..+.. -|. +.
T Consensus 417 ~~~----~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klt 492 (714)
T PRK15400 417 KGN----AGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVT 492 (714)
T ss_pred Hhh----hhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCceEE
Confidence 321 45678888888889999999776 3 33332110 000 11
Q ss_pred EEeCC----------cchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 403 IMVYN----------PAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 403 ~~~~~----------~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+..+. ......+.+.|.++||.+...+ .+.+-+.++...|++++++++++|.++-+
T Consensus 493 i~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d-------~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 493 LLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG-------PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred EEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC-------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 11111 1234578888988899988422 35688888889999999999999988644
No 352
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.64 E-value=1.5e-13 Score=144.34 Aligned_cols=303 Identities=15% Similarity=0.137 Sum_probs=192.7
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHH-HHhcCCeEEEeeCC-------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNG-ARGSGATIRVFQHN------- 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~-~~~~g~~v~~~~~~------- 215 (488)
.....+.++..|+.+|.++..|+++||++ |.+++.+.+++||+|+++..+|-|...+ +.++|+.++.+...
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~ 252 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFI 252 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccCCc
Confidence 34568999999999999999999988885 6888899999999999999999999986 89999998886521
Q ss_pred ---C-----HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHH-HHHcCcEEEEEccccc-cccC
Q 040324 216 ---T-----PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITI-CKRYKAYTYLDEAHSI-GAVG 285 (488)
Q Consensus 216 ---d-----~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l-~~~~g~~li~DE~~s~-g~~g 285 (488)
+ .+.++++|++...+.. +..+| .+++||+.+.| .|.+.++++|.++ |++++ +|++||||.. ..|.
T Consensus 253 g~I~~~~~~~~~i~~~i~~~~p~~~-~~~~p-~k~vvit~pTY--dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~ 327 (720)
T PRK13578 253 GGIDAHCFDEEYLREQIREVAPERA-DEARP-FRLAVIQLGTY--DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFI 327 (720)
T ss_pred CCCChHHccHHHHHHHHHhcCcccc-ccccC-ceEEEEECCCC--cceeecHHHHHHHhhccCC-cEEEeCcchhhhccC
Confidence 3 4457777765310000 00011 37788887777 4888899999998 68888 9999999972 2233
Q ss_pred CCCCCcc-h--hcCCCCCCccEEEcccccccCCc--ccEEEeCHHHH---------HHHHhhCCCCcccCCCCHHHHHHH
Q 040324 286 KTGRGVC-E--LLGVDTSDVDIMMGTFSKSFGSY--GGYIAGSKELI---------QYLKYNCPAHLYATSISPPAAEQI 351 (488)
Q Consensus 286 ~~g~~~~-~--~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~---------~~~~~~~~~~~~~~~~~p~~~aa~ 351 (488)
+.-+... . ..|.+ +..++++-|.+|.+++. ++++-.+.+.+ +.++..-. ...++|.+-+.+|..
T Consensus 328 p~~~~~p~~al~~GaD-~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~-m~qSTSPsY~LmASL 405 (720)
T PRK13578 328 PMMADCSPLLLELNEN-DPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFM-LHASTSPFYPLFAAL 405 (720)
T ss_pred cccccCChhhhhcCCC-CCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHH-HHcCCChHHHHHHHH
Confidence 2111111 1 12222 11238889999999752 25553322111 22322111 012334444555544
Q ss_pred HHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH-HhC-CCeecCCC--------------------------C------
Q 040324 352 ISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKL-QKM-GFEVLGDN--------------------------D------ 397 (488)
Q Consensus 352 ~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~-g~~~~~~~--------------------------~------ 397 (488)
-.+-+.+.+. ..+++.++..+.+..+|+.| +.. ++.+..+. +
T Consensus 406 Dva~~~m~~~----~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf 481 (720)
T PRK13578 406 DVNAKMHEGE----SGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGF 481 (720)
T ss_pred HHHHHHHHHh----hCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCcccccc
Confidence 3334444321 35677888888888888888 443 44433110 0
Q ss_pred ----------CCe-EEEEeCCcch------------HHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHH
Q 040324 398 ----------SPV-MPIMVYNPAK------------VSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLI 454 (488)
Q Consensus 398 ----------~~~-~~~~~~~~~~------------~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid 454 (488)
-|. +.+.. .... ...+.+.|.++||.+.... .+.+-+.++...|+++++
T Consensus 482 ~~~~~~~~~lDP~KltI~t-~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d-------~~~vL~l~s~g~t~~~~~ 553 (720)
T PRK13578 482 EGYAEDQYFVDPCKLLLTT-PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD-------LNSILFLLTPAEDMAKLQ 553 (720)
T ss_pred ccccccccccCCceEEEEc-CCcCcccccccccCccHHHHHHHHHHcCCEEEecC-------CCeEEEEeCCCCCHHHHH
Confidence 010 11111 1112 4678888888899887422 356777778899999999
Q ss_pred HHHHHHHHHHHH
Q 040324 455 EALEVISRIGDL 466 (488)
Q Consensus 455 ~~l~~l~~~~~~ 466 (488)
+++++|.++-+.
T Consensus 554 ~Lv~aL~~f~~~ 565 (720)
T PRK13578 554 QLVAMLARFEKH 565 (720)
T ss_pred HHHHHHHHHHHh
Confidence 999999987543
No 353
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.63 E-value=6.4e-15 Score=130.64 Aligned_cols=160 Identities=27% Similarity=0.321 Sum_probs=122.0
Q ss_pred HHHHHHHHHHh--CCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHH-HHHHhcCCeEEEeeCCCH----HHHH
Q 040324 149 NELEECVARFV--GKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIV-NGARGSGATIRVFQHNTP----SHLE 221 (488)
Q Consensus 149 ~~l~~~la~~~--g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~-~~~~~~g~~v~~~~~~d~----~~Le 221 (488)
.++++.+++++ +.+.++++++|++++..++.++.++++.|++..+.|++.. ..+...|.++..++.++- .+++
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 82 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDVA 82 (170)
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhhh
Confidence 68999999999 7788999999999998888888888899999999998888 778888999988876521 1111
Q ss_pred HHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCC
Q 040324 222 EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSD 301 (488)
Q Consensus 222 ~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~ 301 (488)
+ +.+... ..+..++++.+.+++.|...++++|.++|+++|+++|+|++|+.+.....+ ++....+
T Consensus 83 ~-~~~~~~--------~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~------~~~~~~~ 147 (170)
T cd01494 83 I-LEELKA--------KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG------VLIPEGG 147 (170)
T ss_pred h-hhhccc--------cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc------ccccccc
Confidence 1 211111 125677888888889998889999999999999999999999954443211 1222244
Q ss_pred ccEEEcccccccCCcc-cEEEeC
Q 040324 302 VDIMMGTFSKSFGSYG-GYIAGS 323 (488)
Q Consensus 302 ~di~~~t~sK~~g~~G-g~i~~~ 323 (488)
+|+++.|++|.||++| |+++.+
T Consensus 148 ~d~~~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 148 ADVVTFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred CCEEEEEcccccCCCceEEEEeC
Confidence 6999999999998866 887653
No 354
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.63 E-value=1.1e-13 Score=134.34 Aligned_cols=283 Identities=14% Similarity=0.140 Sum_probs=192.3
Q ss_pred hHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHH----hcCCeEEEeeCCCHHHHHH
Q 040324 147 LHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEE 222 (488)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~----~~g~~v~~~~~~d~~~Le~ 222 (488)
....+++.+++.-|.+.+++++||..|...++..+...++.|+.....|+.+...++ ..|.....+...|++++++
T Consensus 78 t~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~ 157 (409)
T KOG0053|consen 78 TRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILK 157 (409)
T ss_pred chHHHHHHHHHHhCCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHH
Confidence 347899999999999999999999989888889999999888888777777665433 4577777777667777777
Q ss_pred HHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCc
Q 040324 223 VLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDV 302 (488)
Q Consensus 223 ~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~ 302 (488)
.+.+ ++-+|.+|++-++...+.++++++++|+++|+++++|+..+.+.+- ..-+.+.
T Consensus 158 ~i~~-------------~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~----------~pL~lGA 214 (409)
T KOG0053|consen 158 AIKE-------------NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ----------DPLPLGA 214 (409)
T ss_pred hhcc-------------CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc----------ChhhcCC
Confidence 7664 4567888999999999999999999999999999999997622111 1113445
Q ss_pred cEEEcccccccCC----cccEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHH
Q 040324 303 DIMMGTFSKSFGS----YGGYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIREN 377 (488)
Q Consensus 303 di~~~t~sK~~g~----~Gg~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~ 377 (488)
||++.|.+|.||+ .||.++.+ +++...+...... .+...+|..|......|+.+ .-++++..++
T Consensus 215 DIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~--lg~~~~p~~~~ll~Rglktl---------~lRi~~~~en 283 (409)
T KOG0053|consen 215 DIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQED--LGWCEDPFDLFLLSRGLKTL---------HLRINKHSEN 283 (409)
T ss_pred CEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHH--hcCCCCHHHHHHHhcCcchh---------hhhHHHHHHH
Confidence 9999999999986 34888875 7887777665442 33458888877766666654 3345555666
Q ss_pred HHHHHHHHHhC---------CCeecC----------CCCCCeEEEEeCCcchHHHHHHHHHHC--CceEEe----ecCCC
Q 040324 378 SNFFRSKLQKM---------GFEVLG----------DNDSPVMPIMVYNPAKVSSFSRECLKQ--NVAIVT----VGFPA 432 (488)
Q Consensus 378 ~~~l~~~L~~~---------g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~--Gi~v~~----~~~~~ 432 (488)
+..+.+.|++. |++-.+ ...+.++.........+.+|+..|.=- +..+-. +..|+
T Consensus 284 a~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~ 363 (409)
T KOG0053|consen 284 ALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPPA 363 (409)
T ss_pred HHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHHhhhhhhcccCcCccchhhcchh
Confidence 55555555543 222111 111224444455666666666655421 111100 00011
Q ss_pred -------------ccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 433 -------------TPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 433 -------------~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
....++.+|+|+. -|++|.+++.+.++++.+
T Consensus 364 ~mth~~~~e~~~~~Gi~~~LVRvSVG----iEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 364 IMTHASELEEREKFGIDPNLVRVSVG----IEDIEDLIKDFQQALEKA 407 (409)
T ss_pred hhccCCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHHhh
Confidence 0123578999984 577888888888887764
No 355
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.62 E-value=3.6e-13 Score=132.60 Aligned_cols=307 Identities=16% Similarity=0.126 Sum_probs=192.7
Q ss_pred CChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccC-CCcEEEEeCC-------CchH-HHHHHHhcCCeEEEee
Q 040324 143 GTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMG-KGSLIISDSL-------NHNS-IVNGARGSGATIRVFQ 213 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~-~~~~Vl~~~~-------~h~~-~~~~~~~~g~~v~~~~ 213 (488)
+.++-..+|++.+++++|.+.++.+.+|..++..+.+.+++ +++.+.++.. +|.. +...+.++|+.+..+.
T Consensus 71 ~gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~ 150 (467)
T TIGR02617 71 SGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVY 150 (467)
T ss_pred ccCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeeccc
Confidence 44555689999999999999999999999998888888887 5666554332 2333 2344667787766531
Q ss_pred ----------C----C-CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc-CCCCCCCC---ChHHHHHHHHHcCcEEE
Q 040324 214 ----------H----N-TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI-YSMEGELC---KLPEIITICKRYKAYTY 274 (488)
Q Consensus 214 ----------~----~-d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v-~s~~G~~~---~l~~l~~l~~~~g~~li 274 (488)
+ + |+++|++.|++.. +.+...+.+.-+ ++.+|.+. .+++++++|++||+.++
T Consensus 151 ~~ea~~~~~~~~fkG~~dl~~le~~I~~~g---------~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplh 221 (467)
T TIGR02617 151 TKEAFDTGVRYDFKGNFDLEGLERGIEEVG---------PNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVV 221 (467)
T ss_pred chhhcccccCCCCCCCcCHHHHHHHHhhcC---------CCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEE
Confidence 1 1 8999999998631 112333333222 33356555 48899999999999999
Q ss_pred EEcccccc-cc-------CCCCCCcchhcCCCCCCccEEEcccccccCCc-ccEEEeCHH-HH---HHHHhhC----CCC
Q 040324 275 LDEAHSIG-AV-------GKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-GGYIAGSKE-LI---QYLKYNC----PAH 337 (488)
Q Consensus 275 ~DE~~s~g-~~-------g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-Gg~i~~~~~-~~---~~~~~~~----~~~ 337 (488)
+|.+.-+- +. +..+....++..--....|.+..|++|.+|.+ ||+++++++ +. +..+... ...
T Consensus 222 LDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~ 301 (467)
T TIGR02617 222 MDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMGGLLCFKDDSFFDVYTECRTLCVVQEGFP 301 (467)
T ss_pred EEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcccceEEecchhHHHHHHHHHhhcccccCCc
Confidence 99987542 22 34444433331000123478888999999875 799998765 23 3332211 222
Q ss_pred cccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEe----C----Ccc
Q 040324 338 LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMV----Y----NPA 409 (488)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~----~----~~~ 409 (488)
+|+ +++---+.+.-..|+.. ..++.+++-....+||.+.|.+.|++++. .+++.+.+.. + ..-
T Consensus 302 tYG-Glagrd~ea~a~Gl~e~-------~~~~yl~~ri~qv~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~f 372 (467)
T TIGR02617 302 TYG-GLEGGAMERLAVGLYDG-------MNLDWLAYRINQVQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQF 372 (467)
T ss_pred CcC-chhHHHHHHHHhhhhhc-------ccHHHHHHHHHHHHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhC
Confidence 444 23332222222234432 23455555566678999999999999987 6676554422 1 112
Q ss_pred hHHHHHHHHHHC-CceEEeecC------CCccC----CCCeEEEeecCC-CCHHHHHHHHHHHHHHHHHh
Q 040324 410 KVSSFSRECLKQ-NVAIVTVGF------PATPL----LLARARICISAS-HTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 410 ~~~~~~~~l~~~-Gi~v~~~~~------~~~~~----~~~~iRi~~~~~-~t~edid~~l~~l~~~~~~~ 467 (488)
.+..++-+|... ||-.+..|. |.+.. .-..+|+++|-- -|.+++|...+++..+.+.-
T Consensus 373 pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~ 442 (467)
T TIGR02617 373 PAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_pred cHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhhh
Confidence 345677777765 887665332 21111 125799998644 68999999999999987653
No 356
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.62 E-value=1.9e-13 Score=126.49 Aligned_cols=330 Identities=14% Similarity=0.126 Sum_probs=207.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCccc--CCCChhhHHHHHHHHHHHhCCC-CeEEeCCcHHHH-
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRV--DGGTLALHNELEECVARFVGKP-AAIVFGMGYVTN- 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~--~~g~~~~~~~l~~~la~~~g~~-~~i~~~sGs~a~- 174 (488)
|--|||-.| ||.-. +.......+.++++++...-.+.+ .....++.+.+-.++|-++|.. ..++++.++..|
T Consensus 31 ~viyLdgnS---LGa~p-~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl 106 (407)
T COG3844 31 GVIYLDGNS---LGARP-RAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDTTSINL 106 (407)
T ss_pred CeEEeeccc---cccCc-hHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCCcchHH
Confidence 455666432 55442 123334444455665544433333 2334455578899999999974 566666666776
Q ss_pred hhhhhccc--CCCcEE-EEeCCCchHHHHH----HHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc
Q 040324 175 SSILPVLM--GKGSLI-ISDSLNHNSIVNG----ARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE 247 (488)
Q Consensus 175 ~~~~~~~~--~~~~~V-l~~~~~h~~~~~~----~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e 247 (488)
...+.+.. .+++.| +++..++++-... +.+.+......-...+.++++.+.+ ..++|+..
T Consensus 107 ~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~~d-------------d~AvV~L~ 173 (407)
T COG3844 107 FKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAITD-------------DVAVVLLS 173 (407)
T ss_pred HHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHHHHHhhcc-------------ceEEEEec
Confidence 33333322 334444 4555555543222 2222221111112256788877765 68899999
Q ss_pred CcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC-Ccc--cEEEeCH
Q 040324 248 GIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-SYG--GYIAGSK 324 (488)
Q Consensus 248 ~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-~~G--g~i~~~~ 324 (488)
.|...+|...++.+|-++++++|++++.|-+|+.|.+. ..+...++|+-++|..|-++ ++| +++...+
T Consensus 174 ~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp---------~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~ 244 (407)
T COG3844 174 HVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVP---------VDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAP 244 (407)
T ss_pred cccccccceeeHHHHHHHHHhcCceEEeehhcccCCcc---------eeecccCCCeeeeeeceeccCCCCCceeEEecc
Confidence 99999999999999999999999999999999987775 23334567999999999994 456 5565554
Q ss_pred HHHHHHHh--------------------hCCCCcccCCCCH-HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHH
Q 040324 325 ELIQYLKY--------------------NCPAHLYATSISP-PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRS 383 (488)
Q Consensus 325 ~~~~~~~~--------------------~~~~~~~~~~~~p-~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 383 (488)
+..+...+ ......|-.+..| ..+++...+|++..+ -...+++++-....++|.+
T Consensus 245 ~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~----~~i~~lR~kSlaLTd~fie 320 (407)
T COG3844 245 RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFAD----VDITELRKKSLALTDYFIE 320 (407)
T ss_pred ccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhh----cCHHHHHHhhhHHHHHHHH
Confidence 44332211 0000011112333 445555668888732 1367788888888999988
Q ss_pred HHHhC----CCeecCCCC----CCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEee-cCCCCHHHHH
Q 040324 384 KLQKM----GFEVLGDND----SPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICI-SASHTKEDLI 454 (488)
Q Consensus 384 ~L~~~----g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~-~~~~t~edid 454 (488)
-++.. ++.+..+.. +..+....+ ...++.+.|.++||+.-. . ..+.+||.+ |+..+-+|+=
T Consensus 321 LvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp---~~~~V~qaLi~rGVigD~-R------~P~vlRfgftPlY~~~~DVw 390 (407)
T COG3844 321 LVEARCEYYGLTLVTPRAHEERGSQVSLYHP---HGYQVMQALIDRGVIGDF-R------EPDVLRFGFTPLYVSFVDVW 390 (407)
T ss_pred HHHhccccCCcEEeccchhhhccceeeEecC---cHHHHHHHHHHcCccccc-c------CCCeeeecCccceechhHHH
Confidence 88765 556655432 233333222 467899999999998752 2 237899997 5778999999
Q ss_pred HHHHHHHHHHHHhC
Q 040324 455 EALEVISRIGDLVG 468 (488)
Q Consensus 455 ~~l~~l~~~~~~~~ 468 (488)
.+++.|+++++.+.
T Consensus 391 ~AV~~L~evL~t~a 404 (407)
T COG3844 391 DAVDALEEVLDTLA 404 (407)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999998763
No 357
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.62 E-value=3.8e-13 Score=141.20 Aligned_cols=297 Identities=18% Similarity=0.181 Sum_probs=193.4
Q ss_pred hhhHHHHHHHHHHHhCCCCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------
Q 040324 145 LALHNELEECVARFVGKPAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------- 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------- 215 (488)
.....+.++..|+.+|.++.+++++||++ |..++.+.+.+||+|+++..+|-|...++.++|+.++.+...
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g 273 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILG 273 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCCcC
Confidence 34558899999999999999999999775 688888999999999999999999999999999999887521
Q ss_pred --C-----HHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEE-EEEccccc-cccCC
Q 040324 216 --T-----PSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYT-YLDEAHSI-GAVGK 286 (488)
Q Consensus 216 --d-----~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~l-i~DE~~s~-g~~g~ 286 (488)
+ .+.++++|++. |... +.+++||+.+.| .|.+-++++|.++| |+.+ ++||||.. ..|.+
T Consensus 274 ~I~~~~~~~e~I~~~i~~~-----p~~~--~p~~vvit~pTY--dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 274 GIPRREFTRDSIEEKVAAT-----TQAQ--WPVHAVITNSTY--DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred CCChhhccHHHHHHHHHhC-----CCcC--CceEEEEECCCC--CceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 2 37788888763 2111 125788887766 48888999999999 6666 69999972 12222
Q ss_pred CCCCcchhcCC-CCCCccEEEcccccccCCc--ccEEEeCHHHH-HHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccC
Q 040324 287 TGRGVCELLGV-DTSDVDIMMGTFSKSFGSY--GGYIAGSKELI-QYLKYNCPAHLYATSISPPAAEQIISAIQVVIGED 362 (488)
Q Consensus 287 ~g~~~~~~~~v-~p~~~di~~~t~sK~~g~~--Gg~i~~~~~~~-~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~ 362 (488)
.-.......+. .++-+++++-|.+|.+++. ++++-.+..+- +.++..-. ...++|.+-+.+|..-.+.+.+.+
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~-m~~STSPsY~LmASLD~a~~~m~~-- 418 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFM-MHTSTSPSYPIVASVETAAAMLRG-- 418 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHH-HHcCCCcHHHHHHHHHHHHHHHHh--
Confidence 11111111111 1222344488999999763 25553322211 22222111 112344555566655555555432
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHhCC-------CeecCCC--------------C--------------CCe-EEEEeC
Q 040324 363 GSCRGAQKLARIRENSNFFRSKLQKMG-------FEVLGDN--------------D--------------SPV-MPIMVY 406 (488)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~l~~~L~~~g-------~~~~~~~--------------~--------------~~~-~~~~~~ 406 (488)
+..+++.++..+.+..+|+.|.++. +.+..+. . -|. +.+..+
T Consensus 419 --~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~ 496 (713)
T PRK15399 419 --NPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTP 496 (713)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEec
Confidence 1456788888888889999887753 2333210 0 010 111111
Q ss_pred ----------CcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 407 ----------NPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 407 ----------~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.......+.+.|.++||.+...+ .+.+-+.++...|++++++++++|.++-+
T Consensus 497 g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d-------~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 497 GMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG-------PYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred CcccccccccCCCCHHHHHHHHHHcCCEEEecC-------CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 12234578888988899988522 35677888889999999999999987744
No 358
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.62 E-value=2.4e-13 Score=134.78 Aligned_cols=285 Identities=16% Similarity=0.105 Sum_probs=186.9
Q ss_pred ChhhHHHHHHHHHHHhCCC--C-e-EEeCCcHHHHhhhhhccc-CCCcEEEEeCCCchHH-H-HHHHhcCC-eEEEeeCC
Q 040324 144 TLALHNELEECVARFVGKP--A-A-IVFGMGYVTNSSILPVLM-GKGSLIISDSLNHNSI-V-NGARGSGA-TIRVFQHN 215 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~~--~-~-i~~~sGs~a~~~~~~~~~-~~~~~Vl~~~~~h~~~-~-~~~~~~g~-~v~~~~~~ 215 (488)
..+...+..+.|.++++.+ . + ++.+||+.+.++++..+. .+++.|++.. .|+.- . ..++..|. ++..++..
T Consensus 37 F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~ 115 (374)
T TIGR01365 37 GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAE 115 (374)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCC
Confidence 3456688899999999863 2 3 445678888888888877 4788888765 55554 3 45666777 35555432
Q ss_pred -----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCC
Q 040324 216 -----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG 290 (488)
Q Consensus 216 -----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~ 290 (488)
|+++++. + .. +.++ ..=+.+|...|++++.+.+ +++++|+|.+-++|+..
T Consensus 116 ~g~~~~~~~ve~---~------------~~--v~~v-hnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~----- 170 (374)
T TIGR01365 116 YGKLPDLKKVDF---K------------ND--VVFT-WNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQD----- 170 (374)
T ss_pred CCCCCCHHHcCC---C------------CC--EEEe-cCCCchheecccccccccc--CCCcEEEEccchhcCCC-----
Confidence 5555541 1 02 2222 1123357777886655322 58999999999866543
Q ss_pred cchhcCCCCCCccEEEcccccccCCc-c-cEEEeCHHHHHHHHhhCC-----C--------------CcccCCCCH--HH
Q 040324 291 VCELLGVDTSDVDIMMGTFSKSFGSY-G-GYIAGSKELIQYLKYNCP-----A--------------HLYATSISP--PA 347 (488)
Q Consensus 291 ~~~~~~v~p~~~di~~~t~sK~~g~~-G-g~i~~~~~~~~~~~~~~~-----~--------------~~~~~~~~p--~~ 347 (488)
++.+++|+++.+.-|+++++ | ++++.+++..+....... . ....+...| ..
T Consensus 171 ------l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~ 244 (374)
T TIGR01365 171 ------LDYHKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLC 244 (374)
T ss_pred ------CChhHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHH
Confidence 33345899999999999875 4 788888888766543110 0 001111222 33
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCC---CCCCe-EEEEeCCcc------h-----H
Q 040324 348 AEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGD---NDSPV-MPIMVYNPA------K-----V 411 (488)
Q Consensus 348 ~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~---~~~~~-~~~~~~~~~------~-----~ 411 (488)
..+...+|+.+..+ ...+.+.++.+++++.++++++++| +.+... ..++. ..+.+..+. + .
T Consensus 245 l~a~~~~l~~i~~e---gGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~ 321 (374)
T TIGR01365 245 VEDWLDALKWAESI---GGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFA 321 (374)
T ss_pred HHHHHHHHHHHHHc---cCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHH
Confidence 44455666655432 1478899999999999999999999 666542 23443 334443332 2 5
Q ss_pred HHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 412 SSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 412 ~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
.+|.+.|.++||.+.+..++ .....+||..-..++.+|++.+++.|+=+...
T Consensus 322 ~~~~~~l~~~gi~i~~G~~~---~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 322 KELISTLEKEGVAYDIGSYR---DAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred HHHHHHHHHCCEEEeccccc---cCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 78999999999988852222 22378999988899999999999999876653
No 359
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.61 E-value=8.4e-13 Score=134.06 Aligned_cols=290 Identities=16% Similarity=0.151 Sum_probs=184.0
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCC-C--CeEEeCCcHHHHhhhhhccc-------C---
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGK-P--AAIVFGMGYVTNSSILPVLM-------G--- 183 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~-~--~~i~~~sGs~a~~~~~~~~~-------~--- 183 (488)
++...+++...+.+....... ..+......++-..++++++. + ...+++.||++|+.++.+.. .
T Consensus 75 ~~~a~~~~~~~~~~nl~d~~~---~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 75 PPVAAELLVSALNKNLGDPDE---SPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred HHHHHHHHHHHHhhcCCCccc---ChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcc
Confidence 445555555555553222211 113434445555555666665 3 36888899999965443321 0
Q ss_pred ----CCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCC
Q 040324 184 ----KGSLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSME 253 (488)
Q Consensus 184 ----~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~ 253 (488)
....|+++...|.+...+++..|.....++.. |++++++++.+.... . +|+.-.-....
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~---------g--~vV~~aGtT~~ 220 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIG---------G--VVVGTAGTTDT 220 (460)
T ss_pred cccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccC---------c--eEEEEecCCCC
Confidence 01269999999999999999998776665422 899999999984221 1 23333334457
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcch-hcCCCCCCccEEEcccccccCC-cc-cEEEeC-H-HHHH
Q 040324 254 GELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCE-LLGVDTSDVDIMMGTFSKSFGS-YG-GYIAGS-K-ELIQ 328 (488)
Q Consensus 254 G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~-~~~v~p~~~di~~~t~sK~~g~-~G-g~i~~~-~-~~~~ 328 (488)
|.+.|+++|.++|++||+++++|.+++...+- -.+.... .+++ ..+|-+..+++|.+.. .| |+++.+ + ++.+
T Consensus 221 G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~p-f~~~~~~~~f~l--~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~ 297 (460)
T COG0076 221 GSIDDIEELADIAEEYGIWLHVDAAFGGFLLP-FLEPDGRWDFGL--EGVDSITVDGHKYGLAPIGCGVVLFRDEEALRR 297 (460)
T ss_pred CccCCHHHHHHHHHHcCCcEEEEccccceeec-ccCccchhhcCC--CCceEEEECcccccCCCCCceEEEEECHHHhhh
Confidence 99999999999999999999999999832221 1111112 2444 4568888899999754 33 666654 4 3444
Q ss_pred HHHhhCC--------CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCCCC
Q 040324 329 YLKYNCP--------AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDNDSP 399 (488)
Q Consensus 329 ~~~~~~~--------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 399 (488)
.+..... .++-.++-+....++.++.++.+ +.+...++.++..++++++.+.|++.| +++..++..+
T Consensus 298 ~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l----G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~ 373 (460)
T COG0076 298 ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRL----GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELP 373 (460)
T ss_pred hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHh----CHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccc
Confidence 4431111 00111122223455666777776 445678888888999999999999997 8988877778
Q ss_pred eEEEEeCCcch-HHHHHHHHHHCCceEEe
Q 040324 400 VMPIMVYNPAK-VSSFSRECLKQNVAIVT 427 (488)
Q Consensus 400 ~~~~~~~~~~~-~~~~~~~l~~~Gi~v~~ 427 (488)
++.+...+..+ ..+...++.+.|..+..
T Consensus 374 ~V~fr~~~~~~~~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 374 IVAFRLKDDEDTLADLSERLDRRGWQVPA 402 (460)
T ss_pred eEEEEcCCcccchhchHHHHHhcCceeec
Confidence 88777744333 44555666666777664
No 360
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.60 E-value=4.7e-13 Score=146.55 Aligned_cols=279 Identities=15% Similarity=0.154 Sum_probs=185.6
Q ss_pred CCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhcc-cCC--CcEEEEeCCCchHHHHHH----HhcCCeEEEe
Q 040324 142 GGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPVL-MGK--GSLIISDSLNHNSIVNGA----RGSGATIRVF 212 (488)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~-~~~--~~~Vl~~~~~h~~~~~~~----~~~g~~v~~~ 212 (488)
.|..+...++.+.+|+++|.+ ++-+...+|++..+++.++ ..+ ++.|+++...|+++...+ +..|.+++.+
T Consensus 117 QG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~ 196 (954)
T PRK05367 117 QGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG 196 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe
Confidence 355666688999999999987 3455555555555444343 223 489999999999988653 4568888888
Q ss_pred eCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcc
Q 040324 213 QHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVC 292 (488)
Q Consensus 213 ~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~ 292 (488)
+.++ +++ . ...+.+++ .+-+..|.+.++++|.++|+++|+++++|-.+...+....
T Consensus 197 ~~~~--d~~----~------------~~~~~vlv-q~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~----- 252 (954)
T PRK05367 197 DAAK--ALD----H------------DDVFGVLL-QYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTP----- 252 (954)
T ss_pred cCcc--CCC----c------------ccEEEEEE-ecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCC-----
Confidence 7653 111 1 13444444 3346679999999999999999999999997742222211
Q ss_pred hhcCCCCCCccEEEcccccc-----cCCcc-cEEEeCHHHHHHHHhhC----------CCCc-----------cc-CCCC
Q 040324 293 ELLGVDTSDVDIMMGTFSKS-----FGSYG-GYIAGSKELIQYLKYNC----------PAHL-----------YA-TSIS 344 (488)
Q Consensus 293 ~~~~v~p~~~di~~~t~sK~-----~g~~G-g~i~~~~~~~~~~~~~~----------~~~~-----------~~-~~~~ 344 (488)
...-+.||++++..|. +|++| |+++.++++.+.+...- ..+. +- .+.|
T Consensus 253 ----pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsN 328 (954)
T PRK05367 253 ----PGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSN 328 (954)
T ss_pred ----hhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccc
Confidence 1123458999999997 66777 99999998876663110 0011 00 0111
Q ss_pred HHH---HHHHHHHH--HHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHH
Q 040324 345 PPA---AEQIISAI--QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECL 419 (488)
Q Consensus 345 p~~---~aa~~a~L--~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 419 (488)
... +.++++++ ..+ +....+++.+++..++++++++|++.|+++..+.....+.+.+ +.+..++.++|+
T Consensus 329 ict~qaL~a~~a~~y~~~~----g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~--~~~~~~i~~~l~ 402 (954)
T PRK05367 329 ICTAQVLLAVMASMYAVYH----GPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEV--GGDAAAVLARAL 402 (954)
T ss_pred cchHHHHHHHHHHHHHHHH----hhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeC--CCCHHHHHHHHH
Confidence 111 12222221 222 3335677788899999999999988888875442222333332 236778999999
Q ss_pred HCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 420 KQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 420 ~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
++||.+... ..+.+|+|++...|++|||+++++|.
T Consensus 403 ~~gi~~~~~-------~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 403 AAGINLRRV-------DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HCCceeccc-------cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 999988531 13579999999999999999999997
No 361
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.60 E-value=5.3e-13 Score=145.47 Aligned_cols=283 Identities=14% Similarity=0.158 Sum_probs=183.1
Q ss_pred CChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhcc---cCCCcEEEEeCCCchHHHHHHH----hcCCeEEEee
Q 040324 143 GTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPVL---MGKGSLIISDSLNHNSIVNGAR----GSGATIRVFQ 213 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~---~~~~~~Vl~~~~~h~~~~~~~~----~~g~~v~~~~ 213 (488)
|..+...+++..+|+++|.+ ++-++.++|++..+++.+. .++++.|+++...|+++...++ ..|.+++.++
T Consensus 145 G~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~ 224 (993)
T PLN02414 145 GRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVAD 224 (993)
T ss_pred HHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEec
Confidence 55556688999999999986 3555555555554443332 2355889999999999876653 3578888887
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcch
Q 040324 214 HNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCE 293 (488)
Q Consensus 214 ~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~ 293 (488)
..+.+ ... ...+.++ -.+-+..|.+.|+++|.++|+++|+++++ .++.++..+-.
T Consensus 225 ~~~~~----~~~-------------~~v~~vl-vq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~------ 279 (993)
T PLN02414 225 EKDFD----YSS-------------GDVCGVL-VQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLK------ 279 (993)
T ss_pred chhhc----ccc-------------CceEEEE-EecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCC------
Confidence 54311 001 1233444 33445579999999999999999999999 77764332210
Q ss_pred hcCCCCCCccEEEccccccc-----CCcc-cEEEeCHHHHHHHHhh----------CCCCc-----------c-cCCCCH
Q 040324 294 LLGVDTSDVDIMMGTFSKSF-----GSYG-GYIAGSKELIQYLKYN----------CPAHL-----------Y-ATSISP 345 (488)
Q Consensus 294 ~~~v~p~~~di~~~t~sK~~-----g~~G-g~i~~~~~~~~~~~~~----------~~~~~-----------~-~~~~~p 345 (488)
.+..-++||++++..|.. |++. |+++.++++...+... ...+. + -.+.|.
T Consensus 280 --~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNi 357 (993)
T PLN02414 280 --PPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNI 357 (993)
T ss_pred --CHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccch
Confidence 111234589999999987 3333 9999998876644210 01100 0 012333
Q ss_pred HHHHHHHHHHHHH-hccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCce
Q 040324 346 PAAEQIISAIQVV-IGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVA 424 (488)
Q Consensus 346 ~~~aa~~a~L~~i-~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~ 424 (488)
...++..+++..+ ....++...+++.+++.+++.+++++|++.|+++..+.....+.+.+. ...++.++|.++||.
T Consensus 358 ct~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~vt~~~~---~~~~v~~~L~~~gI~ 434 (993)
T PLN02414 358 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTVKVKCS---DADAIADAAAKVGIN 434 (993)
T ss_pred hHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeEEEecC---CHHHHHHHHHHCCCe
Confidence 3333333333211 111133356677888999999999999999987755432233333332 347899999999998
Q ss_pred EEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 425 IVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 425 v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
+.... .+.+|+|++..+|++|||.++++|..
T Consensus 435 l~~~~-------~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 435 LRVVD-------ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred eEEec-------CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 77422 35799999999999999999999963
No 362
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=2.8e-13 Score=121.41 Aligned_cols=283 Identities=18% Similarity=0.156 Sum_probs=192.7
Q ss_pred HHHHHHHHHHhCC-CCeEEeCCcHHHH-hhhhhcccCCC-cEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHH
Q 040324 149 NELEECVARFVGK-PAAIVFGMGYVTN-SSILPVLMGKG-SLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHL 220 (488)
Q Consensus 149 ~~l~~~la~~~g~-~~~i~~~sGs~a~-~~~~~~~~~~~-~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~L 220 (488)
.++...+++--+. .+.+.+..|+... ..++++.+.|| ++|+...|.|+.+.-.+...++.++.++.+ +.+++
T Consensus 72 k~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai 151 (375)
T KOG0633|consen 72 KRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAI 151 (375)
T ss_pred chhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHH
Confidence 4566666654343 3688888898876 78899999888 889999999998887788889999988866 67887
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHc-CcEEEEEccccccccC---CCCCCcchhcC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRY-KAYTYLDEAHSIGAVG---KTGRGVCELLG 296 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~-g~~li~DE~~s~g~~g---~~g~~~~~~~~ 296 (488)
.+.++.. ...+ +++..+..+++|.+.....|.++.+-- +.++++||+|- .|. .+-..+..
T Consensus 152 ~evl~~d----------s~iK-~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYi--dFsg~~S~~~lV~k--- 215 (375)
T KOG0633|consen 152 AEVLELD----------SKIK-CIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYI--DFSGVESRMKLVKK--- 215 (375)
T ss_pred HHHHhcc----------ccce-EEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeE--eeccccccchHhHh---
Confidence 7777652 1134 444556667788888777777777654 78999999996 332 21111222
Q ss_pred CCCCCccEEEcccccccCCcc---cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 040324 297 VDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLAR 373 (488)
Q Consensus 297 v~p~~~di~~~t~sK~~g~~G---g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~ 373 (488)
..+-+++-||||+||.+| |+-+.+.++++.+.....++.-+ .+...+++++|.- ..-+..+..+..
T Consensus 216 ---YpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYNiS----~~~s~~AL~Als~----~n~kkme~~rda 284 (375)
T KOG0633|consen 216 ---YPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYNIS----VAGSVAALAALSD----SNGKKMEDVRDA 284 (375)
T ss_pred ---CCceeehhhhhhhcCcceeEeecccccHHHHHHHHhccCCcccc----chhHHHHHHhcCc----ccchHHHHHHHH
Confidence 233677889999999988 99999999999998887765543 3333444555431 111245677777
Q ss_pred HHHHHHHHHHHHHhCCC--eecCCCCCCeEEEEeCC--cchHHHHHHHHH-HCCceEEeecCCCccCCCCeEEEeecCCC
Q 040324 374 IRENSNFFRSKLQKMGF--EVLGDNDSPVMPIMVYN--PAKVSSFSRECL-KQNVAIVTVGFPATPLLLARARICISASH 448 (488)
Q Consensus 374 ~~~~~~~l~~~L~~~g~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~ 448 (488)
+.+...+|...|.++.+ ...+...+.++.+.+.. ...+..+...+. +.|+.++.-+ ..+.-++++|+++ -
T Consensus 285 iv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrg--se~~c~G~lRitv---G 359 (375)
T KOG0633|consen 285 IVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRG--SEEGCKGYLRITV---G 359 (375)
T ss_pred HHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcC--CccccceeEEEEc---C
Confidence 77777788888888732 13344445666666642 233444444444 4599888422 2333457999987 5
Q ss_pred CHHHHHHHHHHHHHH
Q 040324 449 TKEDLIEALEVISRI 463 (488)
Q Consensus 449 t~edid~~l~~l~~~ 463 (488)
|+|+-+-+++.++++
T Consensus 360 t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 360 TPEENTVLMKCLKQF 374 (375)
T ss_pred CcccchHHHHHHHhh
Confidence 788888888888764
No 363
>PLN02452 phosphoserine transaminase
Probab=99.54 E-value=5.3e-12 Score=125.22 Aligned_cols=324 Identities=14% Similarity=0.126 Sum_probs=200.3
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCC-C----CCcccCCCChhhHHHHHHHHHHHhCCC---CeEEe-CCc
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHS-T----CSSRVDGGTLALHNELEECVARFVGKP---AAIVF-GMG 170 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~-~----~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~-~sG 170 (488)
++.++|+ -|-..-+++|.+++.+.+-++... . .+.| ..-...+..+.++.|.++++.+ +++++ .+|
T Consensus 6 ~~~~~f~----pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHR-s~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsg 80 (365)
T PLN02452 6 GRVFNFS----AGPATLPANVLAKAQAELYNWEGSGMSVMEMSHR-GKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGA 80 (365)
T ss_pred CceEeee----CCCCCCCHHHHHHHHHHHhcccccCccccccCCC-chHHHHHHHHHHHHHHHHhCCCCCceEEEEeCcc
Confidence 3467777 455555678888887776543211 1 1111 1113456689999999999874 35555 566
Q ss_pred HHHHhhhhhcccCCCcEEEE-eCCCchHHH-HHHHhcCCeEEEee--CC---CHHHHHHHHHHHHhcCCCCCCCCCceEE
Q 040324 171 YVTNSSILPVLMGKGSLIIS-DSLNHNSIV-NGARGSGATIRVFQ--HN---TPSHLEEVLREQIAEGQPRTRRPWKKIM 243 (488)
Q Consensus 171 s~a~~~~~~~~~~~~~~Vl~-~~~~h~~~~-~~~~~~g~~v~~~~--~~---d~~~Le~~l~~~~~~~~p~~~~~~~~~~ 243 (488)
+.+.++++..+..+++.+++ ..+.|+.-. .-++..|...+... .. ++.++++ ++.. + ....
T Consensus 81 t~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~----------~-~~~~ 148 (365)
T PLN02452 81 STQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSE-WELT----------P-DAKF 148 (365)
T ss_pred HHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHH-cCCC----------C-CCcE
Confidence 66778887777777665444 455554432 22444454333331 12 1233333 2210 1 1223
Q ss_pred EEEcCcCCCCCC-CCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEE
Q 040324 244 VVVEGIYSMEGE-LCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIA 321 (488)
Q Consensus 244 vi~e~v~s~~G~-~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~ 321 (488)
|.+-.--+.+|. +.+++++. ++++|+|.++++|... .+++ +.++...|..|.+|.+| |+++
T Consensus 149 v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~p---------idv~--~~~v~~~saqK~lGP~Gl~~v~ 211 (365)
T PLN02452 149 VHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKP---------VDVS--KYGVIYAGAQKNVGPSGVTIVI 211 (365)
T ss_pred EEECCCCCCCcEecCcccccC------CCeEEEECCccccCcc---------cCHH--HcCEEEEecccccCCCCeEEEE
Confidence 333222233365 35666654 2899999999965442 2332 23444569999999888 9999
Q ss_pred eCHHHHHHHHhhCC-----------CCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-C
Q 040324 322 GSKELIQYLKYNCP-----------AHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-G 389 (488)
Q Consensus 322 ~~~~~~~~~~~~~~-----------~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 389 (488)
.++++.+....... ...+ .+.+.....+..++|+.+..+ ...+.+.++.+++++++++.|++. |
T Consensus 212 vr~~~l~~~~~~~~~~~~~~~~~~~~s~~-~TP~v~~i~~l~~aL~~l~~~---gGl~~~~~r~~~~a~~l~~~l~~~~G 287 (365)
T PLN02452 212 IRKDLIGNARPITPGMLDYKIHAENDSLY-NTPPCFGIYMCGLVFEDLLAQ---GGLKAMEKRNIRKADLLYDAIDESNG 287 (365)
T ss_pred EcHHHHhhcccCCCchhhHHHHHhcCCcc-CChhHHHHHHHHHHHHHHHHc---cCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99988876532211 1111 124555667777899988532 136788899999999999999985 6
Q ss_pred Ceec-CC--CCC-CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 390 FEVL-GD--NDS-PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 390 ~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+-.. .+ ..+ ..+++.+.......+|.+++.++|+...+ |+... +.+|++.-..++.++++.+++.+++.-+
T Consensus 288 ~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~-G~r~~----gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 288 FYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLK-GHRSV----GGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred cccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccC-Ccccc----CceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 6111 11 123 35666666656778999999999999875 33222 2399999889999999999999998765
Q ss_pred H
Q 040324 466 L 466 (488)
Q Consensus 466 ~ 466 (488)
+
T Consensus 363 ~ 363 (365)
T PLN02452 363 K 363 (365)
T ss_pred h
Confidence 4
No 364
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.49 E-value=9.7e-12 Score=119.61 Aligned_cols=298 Identities=18% Similarity=0.179 Sum_probs=199.4
Q ss_pred CChhhHHHHHHHHHHHhCCCC-eEEeCCcHHHH---hhhhhccc-----CCCcEEEEeCCCchHHHHHHHhcCCeEEEee
Q 040324 143 GTLALHNELEECVARFVGKPA-AIVFGMGYVTN---SSILPVLM-----GKGSLIISDSLNHNSIVNGARGSGATIRVFQ 213 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~-~i~~~sGs~a~---~~~~~~~~-----~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~ 213 (488)
|..+...+|++.|++..|.+. .+-.++|++.- +.+++++- +.++++++++..|+.....+.+.|.+|+.++
T Consensus 106 G~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~ 185 (496)
T COG1003 106 GYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEe
Confidence 556667899999999999876 45566787754 55666653 3567999999999999999999999999999
Q ss_pred CC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC-ChHHHHHHHHHcCcEEEEEccccccccCCC
Q 040324 214 HN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC-KLPEIITICKRYKAYTYLDEAHSIGAVGKT 287 (488)
Q Consensus 214 ~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~-~l~~l~~l~~~~g~~li~DE~~s~g~~g~~ 287 (488)
.+ |+++|++++.+ +.+++++.... .-|... .+.+|+++.+++|..|+.|.+---..+|..
T Consensus 186 ~~~~G~VDlddLk~k~~~-------------~~AalMiTnPs-T~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~ 251 (496)
T COG1003 186 CDENGNVDLDDLRAKAED-------------NLAALMITNPS-TLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLA 251 (496)
T ss_pred cCCCCCccHHHHHHHhcc-------------ceeEEEeccCc-ccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccc
Confidence 76 89999999875 55666653222 225444 599999999999999999999754445532
Q ss_pred CCCcchhcCCCCCCccEEEcccccccC----C--cc-cEEEeCHHHHHHHHh----hCC-CCc------------ccCCC
Q 040324 288 GRGVCELLGVDTSDVDIMMGTFSKSFG----S--YG-GYIAGSKELIQYLKY----NCP-AHL------------YATSI 343 (488)
Q Consensus 288 g~~~~~~~~v~p~~~di~~~t~sK~~g----~--~G-g~i~~~~~~~~~~~~----~~~-~~~------------~~~~~ 343 (488)
-.| .+| .|++-..++|+|. + +| |-|..++++...+-. ... .+. .+.-+
T Consensus 252 rPG---d~G-----~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G 323 (496)
T COG1003 252 RPG---DMG-----FDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG 323 (496)
T ss_pred ccc---ccc-----cceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccC
Confidence 211 122 2666668999983 2 33 667767776665532 000 000 00113
Q ss_pred CHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeE--EEEe------CCcchHHHHH
Q 040324 344 SPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVM--PIMV------YNPAKVSSFS 415 (488)
Q Consensus 344 ~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~--~~~~------~~~~~~~~~~ 415 (488)
|......+++-+..+ +.+..++.-+...-|++|+.++|+.. +++.-....... .+.- .......+++
T Consensus 324 s~~il~~a~~YI~~m----G~~GL~~ase~AvLNANYia~rL~~~-y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvA 398 (496)
T COG1003 324 SASILPIAWAYIRMM----GADGLKQASEVAVLNANYIARRLKGY-YPVPYTGENRVAHECILDARPLKKETGVRALDVA 398 (496)
T ss_pred cchHHHHHHHHHHHH----hHHHHHHHHHHHHHhHHHHHHHhhhc-CccccCCCCcceeEEEeechHhHhhcCCcHHHHH
Confidence 334444455555544 34455666677788899999999873 333111111111 1111 1123566999
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCC
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGI 469 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~ 469 (488)
++|++.|+..-...||-.- .+.+-|-|.-.-|++++|++++++.++.++...
T Consensus 399 KrLlD~GfHaPT~~FPliV--~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 399 KRLLDYGFHAPTMYFPLIV--AGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred HHHHhcCCCCCcccCcccc--ccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999887656666221 356888898889999999999999999877643
No 365
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.48 E-value=7.4e-12 Score=124.93 Aligned_cols=241 Identities=22% Similarity=0.260 Sum_probs=154.6
Q ss_pred HHHHHHHHHHhCCC---------CeEEeCCcHHHHhhhhhccc--------------CCCcEEEEeCCCchHHHHHHHhc
Q 040324 149 NELEECVARFVGKP---------AAIVFGMGYVTNSSILPVLM--------------GKGSLIISDSLNHNSIVNGARGS 205 (488)
Q Consensus 149 ~~l~~~la~~~g~~---------~~i~~~sGs~a~~~~~~~~~--------------~~~~~Vl~~~~~h~~~~~~~~~~ 205 (488)
.++-+.+++++|.+ ..+++++||++|+.++.+.. .+.-.|++++..|.++..++...
T Consensus 82 ~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~l 161 (373)
T PF00282_consen 82 REVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARIL 161 (373)
T ss_dssp HHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHT
T ss_pred HHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhccee
Confidence 44445555666655 26788899999965443321 12346778888999999999999
Q ss_pred CCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccc
Q 040324 206 GATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 206 g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s 280 (488)
|..++.++.+ |+++|+++|++...+|. ...+|+...-....|.+.|+++|.++|++|++||++|.+++
T Consensus 162 Glg~~~I~~~~~~~md~~~L~~~l~~~~~~g~-------~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~g 234 (373)
T PF00282_consen 162 GLGVRKIPTDEDGRMDIEALEKALEKDIANGK-------TPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYG 234 (373)
T ss_dssp TSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTE-------EEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTG
T ss_pred eeEEEEecCCcchhhhHHHhhhhhcccccccc-------cceeeeccCCCcccccccCHHHHhhhccccceeeeeccccc
Confidence 9998888865 78999999998766541 23234433333457999999999999999999999999998
Q ss_pred cccc-CCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCH-HHHH-HHHhhCCCCc---------------cc
Q 040324 281 IGAV-GKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSK-ELIQ-YLKYNCPAHL---------------YA 340 (488)
Q Consensus 281 ~g~~-g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~-~~~~-~~~~~~~~~~---------------~~ 340 (488)
...+ -+..+. -..++ ..+|-+..+.+|.++.+. |+++.+. .... .+... ..+. ++
T Consensus 235 g~~~~~~~~~~--~~~gi--~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~-~~Yl~~~~~~~~~~~~~~~~t 309 (373)
T PF00282_consen 235 GSALLSPEYRH--LLFGI--ERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSIN-ADYLGNDDRESDESYDYGDYT 309 (373)
T ss_dssp GGGGGHCTTGG--GGTTG--GGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEE-ETCTT-S-SSS-GGGCEEEGS
T ss_pred ccccccccccc--ccccc--ccccccccchhhhhcCCccceeEEeecccchHHHhccC-hhhhccccccccccccccccc
Confidence 3112 222222 12344 446888889999998754 6766554 3332 22110 0011 11
Q ss_pred CCCC-HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEe
Q 040324 341 TSIS-PPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMV 405 (488)
Q Consensus 341 ~~~~-p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 405 (488)
..++ ...+.....+|+.+ +.+...+++++..+++++|.+.|++. ++++..++..+++.+.+
T Consensus 310 l~~SR~~~alk~w~~l~~~----G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 310 LQGSRRFRALKLWATLKSL----GREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp SSSSGHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred ccccccchHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 1111 34445566677765 33467788889999999999999998 57887766667666543
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.47 E-value=1.3e-11 Score=124.85 Aligned_cols=284 Identities=18% Similarity=0.203 Sum_probs=179.3
Q ss_pred hHHHHHHHHHHHhCCCCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC----------
Q 040324 147 LHNELEECVARFVGKPAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN---------- 215 (488)
Q Consensus 147 ~~~~l~~~la~~~g~~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~---------- 215 (488)
...+.++..|+.+|.++..|+.+||.+ |..++.+.+++||+|+++..+|-|...++-++|+.++.+...
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~gg 150 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGG 150 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccccccCC
Confidence 347889999999999988888887774 688999999999999999999999999999999998876521
Q ss_pred -CHHHHHHHHHHHHhcCCCCCCCCCc-eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcch
Q 040324 216 -TPSHLEEVLREQIAEGQPRTRRPWK-KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCE 293 (488)
Q Consensus 216 -d~~~Le~~l~~~~~~~~p~~~~~~~-~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~ 293 (488)
+.+.+++.+.++. .. +.+|++-+.| .|...++++|++.++++++|+.+||+|.+ -++..+.. .+
T Consensus 151 I~~~~~~~~l~~~~----------~~~k~~vitnpTY--dGv~~n~~~i~~~~~~~~a~v~~deah~~-~~~~~~~l-~~ 216 (557)
T COG1982 151 IPLETFKEALLAHP----------DAEKLAVITNPTY--DGVCYNLRKIVELLHHYGAWVLYDEAHPA-HFDFSPML-PE 216 (557)
T ss_pred CCHHHHHHHHHhCh----------hhheeEEEecCcc--ceEeecHHHHHHHHhhcCceEEhhhcCcc-cccccccC-cc
Confidence 6788888877642 24 7788887777 38888999999999999999999999973 12222211 11
Q ss_pred hcCCCCCCccEEEcccccccCCc--ccEEEeC-------HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCC
Q 040324 294 LLGVDTSDVDIMMGTFSKSFGSY--GGYIAGS-------KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGS 364 (488)
Q Consensus 294 ~~~v~p~~~di~~~t~sK~~g~~--Gg~i~~~-------~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~ 364 (488)
... ....|++.-|.+|.+++. ++++-.. +.+-+.+... .++|.+-+.+|.. .+-+...+.
T Consensus 217 -~~~-~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h-----~STSPsY~l~ASl-D~Ar~~~~~--- 285 (557)
T COG1982 217 -SAL-NGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMH-----QSTSPSYPLMASL-DVARMQEGN--- 285 (557)
T ss_pred -hhh-hcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHH-----ccCCchHHHHHHH-HHHHHhhhh---
Confidence 111 144588899999999752 2444333 2333333221 2233443444332 222333222
Q ss_pred chHHHH----HHHHHHHHHHHHHHHHhCC-CeecCCCC----------------C----Ce-EEEEe-CCcchHHHHHHH
Q 040324 365 CRGAQK----LARIRENSNFFRSKLQKMG-FEVLGDND----------------S----PV-MPIMV-YNPAKVSSFSRE 417 (488)
Q Consensus 365 ~~~~~~----~~~~~~~~~~l~~~L~~~g-~~~~~~~~----------------~----~~-~~~~~-~~~~~~~~~~~~ 417 (488)
.+..+ .++.-+.++.+++..++.+ +++..+.. . |. +.+.. ........+.+.
T Consensus 286 -~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~ 364 (557)
T COG1982 286 -AGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKY 364 (557)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHH
Confidence 33344 4555555666666666654 45544332 1 11 11111 122345688889
Q ss_pred HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 418 CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 418 l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
|.++|+.....+ .....+-|++....+..+++.+++..+
T Consensus 365 L~e~gii~e~~~-----d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 365 LREHGIIPEETG-----DYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHcCCeeeecC-----CceeeEEeeeccchHHHHHHHHHHHHH
Confidence 999999887422 111233333322455667777766665
No 367
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=2.7e-11 Score=114.78 Aligned_cols=305 Identities=18% Similarity=0.212 Sum_probs=180.7
Q ss_pred hhhHHHHHHHHHHHhCC-------CCeEEeCCcHHHH-hhhhhcc-cCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC
Q 040324 145 LALHNELEECVARFVGK-------PAAIVFGMGYVTN-SSILPVL-MGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (488)
Q Consensus 145 ~~~~~~l~~~la~~~g~-------~~~i~~~sGs~a~-~~~~~~~-~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~ 215 (488)
+....-+++.+|+++.. ++.|++|+|+... ..++..+ .++.+-|+++-|.|+-+...+.+.|+..+.+-.+
T Consensus 112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLd 191 (475)
T KOG0258|consen 112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLD 191 (475)
T ss_pred ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCcccceeec
Confidence 33446677778877743 2567888877654 4444443 4678889999999999999999888877766533
Q ss_pred -------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccC
Q 040324 216 -------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 216 -------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
|.++|++.+.++.....| +++|++.|- +++|.+. .+++|..+|+++|++|+.||||--..+.
T Consensus 192 Ee~~W~ld~~el~~~~~eA~k~i~~-------r~lvvINPG-NPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~ 263 (475)
T KOG0258|consen 192 EESNWSLDVAELERSVDEARKGINP-------RALVVINPG-NPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYT 263 (475)
T ss_pred cccCCCCCHHHHHHHHHHHhccCCc-------eEEEEECCC-CccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccC
Confidence 899999999998744443 455555333 3344333 6999999999999999999999654554
Q ss_pred CCCCC-----cchhcC-CCCCCcc-EEEcccccccC----CcccEEE---eCHHHHHHHHhhCCCCccc-C--------C
Q 040324 286 KTGRG-----VCELLG-VDTSDVD-IMMGTFSKSFG----SYGGYIA---GSKELIQYLKYNCPAHLYA-T--------S 342 (488)
Q Consensus 286 ~~g~~-----~~~~~~-v~p~~~d-i~~~t~sK~~g----~~Gg~i~---~~~~~~~~~~~~~~~~~~~-~--------~ 342 (488)
...+. +....| .-++.+- +-..|.||++- .-|||+- .++++.+.+.+........ . -
T Consensus 264 ~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~ 343 (475)
T KOG0258|consen 264 TGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLV 343 (475)
T ss_pred CCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhcee
Confidence 32221 111122 2222222 22367889873 2448862 2345544443321100000 0 0
Q ss_pred CCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCC-CeEEEEeCCcchHH--------
Q 040324 343 ISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDS-PVMPIMVYNPAKVS-------- 412 (488)
Q Consensus 343 ~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~~~~~~~~-------- 412 (488)
.+|+.- +-.+.+.. ..+.+.+.+.++++++.+.+.++++ |+......+. +.||- +..|.++.
T Consensus 344 VnPP~P--gd~Sy~~~-----~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~-i~lP~kaie~A~~~~~ 415 (475)
T KOG0258|consen 344 VNPPKP--GDPSYDLF-----SSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQ-ISLPPKAIEAAKALGI 415 (475)
T ss_pred cCCCCC--CCcchhhh-----hhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeeccc-ccCCHHHHHHHHHhCC
Confidence 011100 00111111 1144667888899999999999988 7777665554 22332 22232222
Q ss_pred ----HHHHHHHHC-CceEEe-ecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCcc
Q 040324 413 ----SFSRECLKQ-NVAIVT-VGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLVGIKY 471 (488)
Q Consensus 413 ----~~~~~l~~~-Gi~v~~-~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~ 471 (488)
-.|.+|+|. ||.++| .||... .|.-++|.++ .... + ..++.+.++-+++-.+|
T Consensus 416 ~PD~FYc~~LLe~tGIcvVPGSGFGQ~-~GtyH~R~Ti---Lp~~-~-~~i~~~~~fH~~f~~~Y 474 (475)
T KOG0258|consen 416 APDEFYCLKLLEATGICVVPGSGFGQK-EGTYHFRTTI---LPPG-L-EIIEKFKKFHAEFMDEY 474 (475)
T ss_pred CCcHHHHHHHHHhcCeEEecCCCCCCC-CceeEEEEee---cCch-h-HHHHHHHHHHHHHHHhh
Confidence 467788888 999998 444433 3446788876 2222 4 66666666655554433
No 368
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.42 E-value=2.6e-10 Score=108.97 Aligned_cols=304 Identities=17% Similarity=0.196 Sum_probs=164.5
Q ss_pred ccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHh--hhhhcc----c--------CCCcEEEEeCCCchHHHHHH
Q 040324 139 RVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTNS--SILPVL----M--------GKGSLIISDSLNHNSIVNGA 202 (488)
Q Consensus 139 ~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~--~~~~~~----~--------~~~~~Vl~~~~~h~~~~~~~ 202 (488)
|++.|..+...++++..|+++|.+ ..++..+.|-..+ .+..++ . ...-+.+++.|.|-.....+
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~ 141 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT 141 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence 333255566689999999999985 3444444433332 222222 1 23457899999999999999
Q ss_pred HhcCCeEEEeeCC----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC---hHHHHHH-HHHcCcEEE
Q 040324 203 RGSGATIRVFQHN----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK---LPEIITI-CKRYKAYTY 274 (488)
Q Consensus 203 ~~~g~~v~~~~~~----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~---l~~l~~l-~~~~g~~li 274 (488)
...|.+.+++|.+ |++.+|+++.+. +..+.+..+..-.+++|..-- .++++++ +...++.++
T Consensus 142 E~~Giemi~VpM~~dGPDmD~Ve~LV~~D----------~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 142 EHFGIEMIPVPMTEDGPDMDMVEELVAED----------PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp HHCT-EEEEEEEETTEE-HHHHHHHTHTS----------TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred HhhCcEEEecCCCCCCCCHHHHHHHHhcC----------CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 9999999999965 899999988753 234555555444444676554 4444444 245799999
Q ss_pred EEcccccccc-CCCCCC----c---chhcCCCCCCccEEEccccccc-CCcc-cEEEeCHHHHHHHHhhCCCCcccCCCC
Q 040324 275 LDEAHSIGAV-GKTGRG----V---CELLGVDTSDVDIMMGTFSKSF-GSYG-GYIAGSKELIQYLKYNCPAHLYATSIS 344 (488)
Q Consensus 275 ~DE~~s~g~~-g~~g~~----~---~~~~~v~p~~~di~~~t~sK~~-g~~G-g~i~~~~~~~~~~~~~~~~~~~~~~~~ 344 (488)
-|.+|++-.+ +..-.. + ++-.|- | +..++..|+||.- .+.| ++++++++-++.+...... .+ ..
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGn-p-drv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~--~t--Ig 285 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGN-P-DRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSV--QT--IG 285 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT--T-TSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHH--H---S-
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCC-C-CeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcC--ce--eC
Confidence 9999986555 222111 1 222232 3 3457778999964 4555 9999999888877654321 11 22
Q ss_pred HHHHHHHHHHHHHHhccCCCchHH-HHHHHHHHH-----------HHHHHHHHH-hCCC-eecCCCCCCeEEEEeCCcch
Q 040324 345 PPAAEQIISAIQVVIGEDGSCRGA-QKLARIREN-----------SNFFRSKLQ-KMGF-EVLGDNDSPVMPIMVYNPAK 410 (488)
Q Consensus 345 p~~~aa~~a~L~~i~~~~~~~~~~-~~~~~~~~~-----------~~~l~~~L~-~~g~-~~~~~~~~~~~~~~~~~~~~ 410 (488)
|--..+. .-.+.+.+ .+ .+.++.++. .+.|.+.|. ..|+ .+..|.+++++.+...+ ..
T Consensus 286 pdKvNQL-RHvrff~d------~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G~ 357 (425)
T PF12897_consen 286 PDKVNQL-RHVRFFKD------AEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-GT 357 (425)
T ss_dssp --HHHHH-HHHHHHHS------HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T-
T ss_pred ccHHHHH-HHHHHhcC------hhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-Ch
Confidence 2222222 22233321 12 233333333 333444444 3444 67778888998888765 55
Q ss_pred HHHHHHHHHHCCceEEeec--CCCc-cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 411 VSSFSRECLKQNVAIVTVG--FPAT-PLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 411 ~~~~~~~l~~~Gi~v~~~~--~~~~-~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
+.++.+.+.+.||.+.+.| ||.+ ...++.|||+|+ .-+.||++.+++.+.-+++..
T Consensus 358 AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 358 AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCVKLA 416 (425)
T ss_dssp HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999855 4433 123478999996 568999999999998876543
No 369
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.41 E-value=7.3e-11 Score=112.52 Aligned_cols=326 Identities=14% Similarity=0.124 Sum_probs=199.5
Q ss_pred ceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHh-CCC---------CeEEeCC
Q 040324 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFV-GKP---------AAIVFGM 169 (488)
Q Consensus 100 ~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~---------~~i~~~s 169 (488)
..-||++-+.|-.-... ..+..+++++=+...... .+..+ -......++.+.+++++ |.+ ..+-..+
T Consensus 26 ~~KVNLgIGvY~de~Gk-~pvl~aV~~Ae~~l~~~~-~~k~Y-l~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~G 102 (396)
T COG1448 26 PNKVNLGIGVYKDEDGK-TPVLRAVKKAEKRLLEQE-KTKNY-LPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLG 102 (396)
T ss_pred cCeeeeeeeeeeCCCCC-cchhHHHHHHHHHhhccc-ccccc-CCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCC
Confidence 34578764444333322 456667666544432211 11111 11222356666666654 432 2455667
Q ss_pred cHHHHhhhhh--cccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-------CHHHHHHHHHHHHhcCCCCCCCCCc
Q 040324 170 GYVTNSSILP--VLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTRRPWK 240 (488)
Q Consensus 170 Gs~a~~~~~~--~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-------d~~~Le~~l~~~~~~~~p~~~~~~~ 240 (488)
||.|.-.+.. ....+...|.+++|.|+.....+...|.++..+++- |.+.+-+.|++. +.+
T Consensus 103 GTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a----------~~~ 172 (396)
T COG1448 103 GTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTA----------PEG 172 (396)
T ss_pred cchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhC----------CCC
Confidence 8888743333 334677789999999999999999999999988853 555555555543 346
Q ss_pred eEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCCCCCC-c--chhc-CCCCCCccEEEccccccc
Q 040324 241 KIMVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-V--CELL-GVDTSDVDIMMGTFSKSF 313 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-~--~~~~-~v~p~~~di~~~t~sK~~ 313 (488)
.++++-+...+++|.-. ..++|.++.++.+.+-++|=+|- +|+....- + ...+ ...+. -++..||||.|
T Consensus 173 ~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQ--GF~~GleeDa~~lR~~a~~~~~--~lva~S~SKnf 248 (396)
T COG1448 173 SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQ--GFADGLEEDAYALRLFAEVGPE--LLVASSFSKNF 248 (396)
T ss_pred CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhh--hhccchHHHHHHHHHHHHhCCc--EEEEehhhhhh
Confidence 67777799999999644 48899999999999999999998 77643211 1 1111 11122 57779999999
Q ss_pred CCcc------cEEEeCHHHHHHHHh----hCCCCcccCCCCHHHHHHHHHH-HH--HHhccCCCchHHHHHHHHHHHHHH
Q 040324 314 GSYG------GYIAGSKELIQYLKY----NCPAHLYATSISPPAAEQIISA-IQ--VVIGEDGSCRGAQKLARIRENSNF 380 (488)
Q Consensus 314 g~~G------g~i~~~~~~~~~~~~----~~~~~~~~~~~~p~~~aa~~a~-L~--~i~~~~~~~~~~~~~~~~~~~~~~ 380 (488)
|.-| .+++.+++..+.+.. ..+ .+|+ .+|..-++..++ |. .+..+ =.++...+++++.++++.
T Consensus 249 gLYgERVGa~~vva~~~~~a~~v~sqlk~~iR-~~yS--nPP~~Ga~vva~IL~~p~Lra~-W~~El~~Mr~Ri~~mR~~ 324 (396)
T COG1448 249 GLYGERVGALSVVAEDAEEADRVLSQLKAIIR-TNYS--NPPAHGAAVVATILNNPELRAE-WEQELEEMRQRILEMRQA 324 (396)
T ss_pred hhhhhccceeEEEeCCHHHHHHHHHHHHHHHH-hccC--CCchhhHHHHHHHhCCHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 9744 444556665554432 112 2344 444322222221 11 11100 112556788999999999
Q ss_pred HHHHHHhC----CCeecCCCCCCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHHH
Q 040324 381 FRSKLQKM----GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLIE 455 (488)
Q Consensus 381 l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~ 455 (488)
|.+.|++. .+..+....+ +| .+. ....+-..+|+++ ||+++.. + |||+ ..+++..|++
T Consensus 325 lv~~L~~~~~~~~f~~i~~Q~G-MF---sy~-Gls~~QV~rLree~~IY~v~s---------G--Ri~v-aGl~~~ni~~ 387 (396)
T COG1448 325 LVDALKALGAPRNFDFIISQRG-MF---SYT-GLSPEQVDRLREEFGIYLVAS---------G--RINV-AGLNTSNIDY 387 (396)
T ss_pred HHHHHHhhCCCcccchHhhcCc-ee---ecC-CCCHHHHHHHHHhccEEEecC---------C--eeee-ccCChhhHHH
Confidence 99999985 3445544444 22 222 3334555667766 9999831 2 8888 5689999999
Q ss_pred HHHHHHHH
Q 040324 456 ALEVISRI 463 (488)
Q Consensus 456 ~l~~l~~~ 463 (488)
+.++|.++
T Consensus 388 va~ai~~v 395 (396)
T COG1448 388 VAKAIAAV 395 (396)
T ss_pred HHHHHHhh
Confidence 99999876
No 370
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.39 E-value=2.8e-10 Score=122.94 Aligned_cols=278 Identities=15% Similarity=0.164 Sum_probs=176.5
Q ss_pred CCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhcc---cCCCcEEEEeCCCchHHHHHHH----hcCCeEEEe
Q 040324 142 GGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPVL---MGKGSLIISDSLNHNSIVNGAR----GSGATIRVF 212 (488)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~~---~~~~~~Vl~~~~~h~~~~~~~~----~~g~~v~~~ 212 (488)
.|..+..-++...+++++|.+ .+-+...++.+.++++.+. .++++.|++++..|+.+...++ ..|.+++.+
T Consensus 105 QG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~ 184 (939)
T TIGR00461 105 QGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV 184 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE
Confidence 356666678999999999997 3455555555554444332 2345789999999999875544 567777776
Q ss_pred eCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccc-cccCCCCCCc
Q 040324 213 QHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSI-GAVGKTGRGV 291 (488)
Q Consensus 213 ~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~-g~~g~~g~~~ 291 (488)
|+++|++.+ ..+++++... +..|.+.++++|.++++++|++++++--... +.+-+.|
T Consensus 185 ---~~~~l~~~~---------------~~~~v~~q~P-n~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pg--- 242 (939)
T TIGR00461 185 ---DCSDIKKAV---------------DVFGCLLQYP-ATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPG--- 242 (939)
T ss_pred ---cHHHHhhcC---------------CEEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHH---
Confidence 455554433 1344544322 3458888999999999999999999655431 2221111
Q ss_pred chhcCCCCCCccEEEcccccccC------Ccc-cEEEeCHHHHHHHHhh-------C---CCCccc-----------CCC
Q 040324 292 CELLGVDTSDVDIMMGTFSKSFG------SYG-GYIAGSKELIQYLKYN-------C---PAHLYA-----------TSI 343 (488)
Q Consensus 292 ~~~~~v~p~~~di~~~t~sK~~g------~~G-g~i~~~~~~~~~~~~~-------~---~~~~~~-----------~~~ 343 (488)
-+ +.||+++ .+|.|| +++ |+++.+++++..+... . ..+..+ -..
T Consensus 243 --e~-----GaDi~vg-~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAt 314 (939)
T TIGR00461 243 --HY-----GADIVLG-SSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKAT 314 (939)
T ss_pred --Hc-----CCcEEee-CCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccC
Confidence 12 3478764 445443 333 9999998877665210 0 011110 011
Q ss_pred CHHHHHHHHH----H--HHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHH
Q 040324 344 SPPAAEQIIS----A--IQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRE 417 (488)
Q Consensus 344 ~p~~~aa~~a----~--L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (488)
+..+.++++- + +..+ +++..+++.++...++.++.++|++.|+++..+.--.-+.+.+. .....++.++
T Consensus 315 SNICt~qaL~a~~a~~Y~~~~----G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF~~~~v~~~-~~~~~~i~~~ 389 (939)
T TIGR00461 315 SNICTAQVLLANVASSYCVYH----GPKGLKNIARRIHSLTSILANGLENDPHELINKTWFDTLTVKVG-NGISSELLKA 389 (939)
T ss_pred cchhHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCccceEEEEeC-CCCHHHHHHH
Confidence 2222222222 2 2222 44456777888899999999999999988765421112223331 1357789999
Q ss_pred HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 418 CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 418 l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
++++||.+.. ...+.+++|+.-.+|++||+.+++++.
T Consensus 390 ~~~~gi~l~~-------~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 390 AEEFNINLRA-------VDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred HHHCCCeeee-------cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 9999999763 123689999999999999999999995
No 371
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.35 E-value=5.2e-10 Score=105.31 Aligned_cols=320 Identities=18% Similarity=0.178 Sum_probs=192.2
Q ss_pred cchHHHHHHH-HHcCCCCCCcccCCCChhhHHHHH----HHHHHHhCCC-----CeEEeCCcHHHHhhhhhcccCCCcEE
Q 040324 119 YCTPRVIDSL-KKYSHSTCSSRVDGGTLALHNELE----ECVARFVGKP-----AAIVFGMGYVTNSSILPVLMGKGSLI 188 (488)
Q Consensus 119 ~v~~a~~~~l-~~~~~~~~~~~~~~g~~~~~~~l~----~~la~~~g~~-----~~i~~~sGs~a~~~~~~~~~~~~~~V 188 (488)
.+.+|+-..+ .+|..++.+.|++.|+ +...+.| ++.-+.++.+ -.+-.-||+-||+++-.++..|++.|
T Consensus 55 aVmeAlGS~ltNKYSEGyPG~RYYGGn-e~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~Ri 133 (477)
T KOG2467|consen 55 AVMEALGSCLTNKYSEGYPGARYYGGN-EYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERI 133 (477)
T ss_pred HHHHHHhHHhhcccccCCCcccccCcc-hHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCee
Confidence 4555555554 3577788888876654 4443332 2333456654 24556699999999999999999988
Q ss_pred EE---eCCCchHH---HHHHHhcCCeEE----EeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCC
Q 040324 189 IS---DSLNHNSI---VNGARGSGATIR----VFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYS 251 (488)
Q Consensus 189 l~---~~~~h~~~---~~~~~~~g~~v~----~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s 251 (488)
.- +++.|-+. ...-+.+...+. +++.| |.+.||+.-... +..++|+ .+.|+
T Consensus 134 MGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f------------rPk~iiaG~SaY~ 201 (477)
T KOG2467|consen 134 MGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF------------RPKLIIAGTSAYS 201 (477)
T ss_pred eeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc------------CCcEEEeccccch
Confidence 74 34444332 111112211111 11212 888998876653 2234544 56676
Q ss_pred CCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC-CcccEEEeCHH-----
Q 040324 252 MEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG-SYGGYIAGSKE----- 325 (488)
Q Consensus 252 ~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g-~~Gg~i~~~~~----- 325 (488)
.. .+.++++++|++.|++|++|-+|-.|... .|-. .+-| +-.||+..|.+|++- .-||.|.-++-
T Consensus 202 R~---~DYaR~R~Iad~~gA~Lm~DMAHISgLVA-A~vi-psPF----ey~DiVTTTTHKsLRGPRg~mIFyRkGvk~~~ 272 (477)
T KOG2467|consen 202 RL---IDYARFRKIADKVGAYLMADMAHISGLVA-AGVI-PSPF----EYCDIVTTTTHKSLRGPRGAMIFYRKGVKSIK 272 (477)
T ss_pred hh---ccHHHHHHHHHhcCceeehhhhhHHHHHh-cccC-CCcc----cccceeeccccccccCCcceeEEEeccCCcCC
Confidence 54 36899999999999999999999644332 2211 1111 235899999999994 45677765441
Q ss_pred ----------HHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCC
Q 040324 326 ----------LIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGD 395 (488)
Q Consensus 326 ----------~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~ 395 (488)
+-+.+...-.+...+. .+....++...+|+.. .+++..+..+++.+|.+.|.+.|.+.|..++..
T Consensus 273 ~k~g~~i~ydlE~kINfaVFP~lQGG-PHNhtIaalAvALkQa----~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtg 347 (477)
T KOG2467|consen 273 PKQGKEILYDLEDKINFAVFPGLQGG-PHNHTIAALAVALKQA----MTPEFKEYQKQVLKNAKALASALISRGYKLVTG 347 (477)
T ss_pred CCCCCcceechhhhhhhhccccccCC-CCcchHHHHHHHHHhh----CCHHHHHHHHHHHHHHHHHHHHHHHcCceEecC
Confidence 1222222111112221 2223334444556654 455788899999999999999999999987643
Q ss_pred -CCCCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCC--ccCCCCeEEEeecCCCC----HHHHHHHHHHHHHHHH
Q 040324 396 -NDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPA--TPLLLARARICISASHT----KEDLIEALEVISRIGD 465 (488)
Q Consensus 396 -~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~--~~~~~~~iRi~~~~~~t----~edid~~l~~l~~~~~ 465 (488)
.+.+++.+.+........-+++.++. +|.+..-.-|. .....+.+|+.-|+..| ++|.++..+-|.++++
T Consensus 348 GTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 348 GTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 33467777776554444444555554 66554311111 12234569998776554 6888888888887764
No 372
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.33 E-value=1.5e-09 Score=113.43 Aligned_cols=299 Identities=15% Similarity=0.135 Sum_probs=176.7
Q ss_pred cccCCCCCCccchHHHHHHHHH-cCCCCCCcccCCCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhh---hhccc
Q 040324 109 NYLGFAAADEYCTPRVIDSLKK-YSHSTCSSRVDGGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSI---LPVLM 182 (488)
Q Consensus 109 ~~lg~~~~~~~v~~a~~~~l~~-~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~---~~~~~ 182 (488)
.|+|.-.+++.....+.+.+.. ++.+........+.+....++-+.+|+++|.+ ...++++||+||+.+ ++...
T Consensus 85 ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k 164 (608)
T TIGR03811 85 RYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIK 164 (608)
T ss_pred ceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhh
Confidence 4455544444444444443332 22222222222245556667777778888865 368899999999532 22110
Q ss_pred ---------C----------------------------------------------CCcEEEEeCCCchHHHHHHHhcCC
Q 040324 183 ---------G----------------------------------------------KGSLIISDSLNHNSIVNGARGSGA 207 (488)
Q Consensus 183 ---------~----------------------------------------------~~~~Vl~~~~~h~~~~~~~~~~g~ 207 (488)
. +-..+++++..|.|+..++...|.
T Consensus 165 ~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGl 244 (608)
T TIGR03811 165 SLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGI 244 (608)
T ss_pred hccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCC
Confidence 0 001588888899999999999887
Q ss_pred ---eEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHH---HHcCc--EEE
Q 040324 208 ---TIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITIC---KRYKA--YTY 274 (488)
Q Consensus 208 ---~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~---~~~g~--~li 274 (488)
.++.+|.+ |+++|++.|++...+|.| +.+|+.-.-....|.+.|+++|.++| +++|+ +|+
T Consensus 245 G~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p-------~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lH 317 (608)
T TIGR03811 245 GLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTP-------ILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLH 317 (608)
T ss_pred CcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCC-------eEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEe
Confidence 46777754 899999999987666543 33333323334579999999999999 67887 699
Q ss_pred EEccccccccCC----C--CC--------------------------Cc-chhcCCCCCCccEEEcccccccCCcc--c-
Q 040324 275 LDEAHSIGAVGK----T--GR--------------------------GV-CELLGVDTSDVDIMMGTFSKSFGSYG--G- 318 (488)
Q Consensus 275 ~DE~~s~g~~g~----~--g~--------------------------~~-~~~~~v~p~~~di~~~t~sK~~g~~G--g- 318 (488)
+|.|++ ++.. . +. .. ..+-++ ..+|-+...++|.+..+- |
T Consensus 318 VDAAyG--G~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl--e~ADSItvDpHK~g~~Py~~G~ 393 (608)
T TIGR03811 318 VDAAYG--GYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI--SEAESVTIDPHKMGYIPYSAGG 393 (608)
T ss_pred eecccc--chhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC--cCceEEEeCcccccccCCCeEE
Confidence 999998 4321 0 00 00 011233 356888889999986533 5
Q ss_pred EEEeCHHHHHHHHhhCCCCc-------------ccCCCC--HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHH
Q 040324 319 YIAGSKELIQYLKYNCPAHL-------------YATSIS--PPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRS 383 (488)
Q Consensus 319 ~i~~~~~~~~~~~~~~~~~~-------------~~~~~~--p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~ 383 (488)
+++.++++.+.+..... +. ++..++ ...+++...+++.+. .+.+...+++++..++++++.+
T Consensus 394 ll~Rd~~~~~~~~~~a~-Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~--~G~~Gyg~~i~~~i~~A~~~~~ 470 (608)
T TIGR03811 394 IVIQDIRMRDVISYFAT-YVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLP--LNVTGYGKLIGASIEGAHRFYD 470 (608)
T ss_pred EEEeCHHHHHHHhcCcc-hhccccccCcccccccceecCCccHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 44555665554432111 11 111122 233555667777751 1233567888999999999999
Q ss_pred HHHhCC-------Cee--cCCCCCCeEEEEeCCc-----chHHHHHHHHHHC
Q 040324 384 KLQKMG-------FEV--LGDNDSPVMPIMVYNP-----AKVSSFSRECLKQ 421 (488)
Q Consensus 384 ~L~~~g-------~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~ 421 (488)
.|++.+ +++ ..++...++.+.+... ....++-+++.++
T Consensus 471 ~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~ 522 (608)
T TIGR03811 471 FLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDY 522 (608)
T ss_pred HHHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHh
Confidence 998853 333 3344445555544211 2244555555554
No 373
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.33 E-value=1.9e-09 Score=105.98 Aligned_cols=320 Identities=13% Similarity=0.072 Sum_probs=196.2
Q ss_pred EEeccccccCCCCCCccchHHHHHHHHHcCC---CC--CCcccCCCChhhHHHHHHHHHHHhCCC---CeEEeCC-cHHH
Q 040324 103 LNLGSYNYLGFAAADEYCTPRVIDSLKKYSH---ST--CSSRVDGGTLALHNELEECVARFVGKP---AAIVFGM-GYVT 173 (488)
Q Consensus 103 ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~---~~--~~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~s-Gs~a 173 (488)
.||+ -|-+.-|++|.+++++.+-++.. +. .+.|. .-......++++.|.++++.+ +++++.+ |+.+
T Consensus 6 ~nF~----aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs-~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~ 80 (364)
T PRK12462 6 LNFS----GGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRS-SWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQ 80 (364)
T ss_pred ceec----CCCcCCCHHHHHHHHHHHhcccccCcccccccccc-HHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHH
Confidence 4565 45444467888888877766422 11 11111 113456688899999999873 3555554 5555
Q ss_pred HhhhhhcccCCCcEE--EEeCCCchHHHHH-HHhcCCeEEEeeC------CCHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 174 NSSILPVLMGKGSLI--ISDSLNHNSIVNG-ARGSGATIRVFQH------NTPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 174 ~~~~~~~~~~~~~~V--l~~~~~h~~~~~~-~~~~g~~v~~~~~------~d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
.+++...+.++++.+ .+..+.|+.-..- ++..| .+..+.. ..+-+.++ ++.. +....+.
T Consensus 81 ~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~-~~~~----------~d~~~v~ 148 (364)
T PRK12462 81 FSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAE-LDWD----------ARAPFRH 148 (364)
T ss_pred HHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHH-hccC----------CCCcEEE
Confidence 577777788888744 4566666554322 33334 3333321 11111111 1110 1122232
Q ss_pred EE--cCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cEEE
Q 040324 245 VV--EGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIA 321 (488)
Q Consensus 245 i~--e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~ 321 (488)
++ |++. |+..+ ++.+.+++++|+|-+-++++. .++.++.|++..+.-|.+|.+| ++++
T Consensus 149 ~t~NETst---Gv~~~-----~~~~~~~~llvvD~sS~~~s~-----------pid~~~~dvi~agsQKnlgP~Gltvvi 209 (364)
T PRK12462 149 YVSNETVE---GLQFP-----DAAGLPDSPLIADMSSDFMSR-----------PFDVEAYGMVYAHAQKNLGPAGVTVAI 209 (364)
T ss_pred EccCCCCc---eEecC-----cccccCCCeEEEEcCchhhCC-----------CCChHHccEEEeeccccCCCCceEEEE
Confidence 32 4443 54443 333346899999999885432 2233445899999999999888 8888
Q ss_pred eCHHHHHHHHhhC-----------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-
Q 040324 322 GSKELIQYLKYNC-----------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG- 389 (488)
Q Consensus 322 ~~~~~~~~~~~~~-----------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 389 (488)
.+++.++...... ...++. +.+.....+...+|+.|..+.+ ..+.+.++.+++++.+++.+++..
T Consensus 210 vs~~al~~~~~~~p~~ldy~~~~~~~s~~n-TPpv~~iy~l~~~l~~i~~e~G--Gl~~~~~r~~~ka~~ly~~id~~~~ 286 (364)
T PRK12462 210 IRRALLERVPDTLPPMLDFRTHVEHRSNYN-TPPVFAIYVMALVLRWIRDEIG--GVHAMRDINARKAAMLYATLDALNE 286 (364)
T ss_pred ECHHHHhhccccCCchhhHHHHHhcCCCCC-CchHHHHHHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8988876554311 111221 2444566667788888853211 467888899999999999999884
Q ss_pred Cee---cCCCCC-CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 390 FEV---LGDNDS-PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 390 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
+-. .....| .-+++.+.++....+|.+.+.++|+.-.. ||... +.+|.++-.+++.|+++.+++-++++-+
T Consensus 287 ~~~~~~~~~~RS~mnv~f~~~~~~l~~~f~~~a~~~gl~~lk-Ghr~v----gg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 287 VIDCHAHRAARSTMNVAFRFRQPRLDTLFKEQSTEAGFCGLS-GHRSI----GGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred cccCCCChhhcCcceEEEEcCCHHHHHHHHHHHHHCCCcccc-CCccc----CceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 422 222234 23455566777778999999999998763 43332 4599999889999999999998888755
Q ss_pred H
Q 040324 466 L 466 (488)
Q Consensus 466 ~ 466 (488)
+
T Consensus 362 ~ 362 (364)
T PRK12462 362 R 362 (364)
T ss_pred h
Confidence 4
No 374
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.30 E-value=3.6e-09 Score=102.23 Aligned_cols=284 Identities=18% Similarity=0.208 Sum_probs=179.3
Q ss_pred CChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhc---ccCCCcEEEEeCCCchHHHHHHHh----cCCeEEEee
Q 040324 143 GTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPV---LMGKGSLIISDSLNHNSIVNGARG----SGATIRVFQ 213 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~---~~~~~~~Vl~~~~~h~~~~~~~~~----~g~~v~~~~ 213 (488)
|..+..-++...++++.|.+ .+-+.--||.+.++++.+ -..+...++++...|+.+...++- .|.++..++
T Consensus 117 GrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~ 196 (450)
T COG0403 117 GRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVD 196 (450)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEec
Confidence 44444567888899999986 455555565555443332 234468999999999999877553 367788888
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE-EccccccccCCCCCCcc
Q 040324 214 HNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYL-DEAHSIGAVGKTGRGVC 292 (488)
Q Consensus 214 ~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~-DE~~s~g~~g~~g~~~~ 292 (488)
.+|.++|++. .+ .....++++....-++.+.++.++.+.++++|+++++ =+--+.+.+-+.|.
T Consensus 197 ~~d~~~l~~~-~~------------~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe--- 260 (450)
T COG0403 197 ADDLDDLESA-DD------------GDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPGE--- 260 (450)
T ss_pred cchhhhhhhc-cc------------cCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCccc---
Confidence 8889988887 43 2567777766554433666799999999999998764 22333334444443
Q ss_pred hhcCCCCCCccEEEcccc---cccCCcc---cEEEeCHHHHHHHH----------------------------hhCCCCc
Q 040324 293 ELLGVDTSDVDIMMGTFS---KSFGSYG---GYIAGSKELIQYLK----------------------------YNCPAHL 338 (488)
Q Consensus 293 ~~~~v~p~~~di~~~t~s---K~~g~~G---g~i~~~~~~~~~~~----------------------------~~~~~~~ 338 (488)
+| .||++++.. =.+|-+| ||.+.+++++..+. +.+..+.
T Consensus 261 --~G-----ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSN 333 (450)
T COG0403 261 --FG-----ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSN 333 (450)
T ss_pred --cC-----CceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchh
Confidence 23 378887643 3333333 89988887754431 1111000
Q ss_pred ccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC--CCeecCCCCCCeEEEEeCCc-chHHHHH
Q 040324 339 YATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM--GFEVLGDNDSPVMPIMVYNP-AKVSSFS 415 (488)
Q Consensus 339 ~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~--g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 415 (488)
- +.+...+|.+-+..-.+ .+++...++.++..++..++.++|++. |+++... ..+--+.+..+ .....+.
T Consensus 334 I--CTnQaLlA~~As~y~~~---hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~~~~~l~ 406 (450)
T COG0403 334 I--CTNQALLALAASMYAVY---HGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEEVAEALL 406 (450)
T ss_pred h--hHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchhHHHHHH
Confidence 0 01111111111111122 256677888899999999999999966 4766543 22222223222 4455667
Q ss_pred HHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 416 ~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.+....|+-+..+. ...+-+++.-.+|++||+.+++++...
T Consensus 407 ~~~~~~G~~L~~~~-------~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 407 AAAIAGGINLRRVD-------ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred HHHHhcCCceeeec-------CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 77777788887532 246889999999999999999998764
No 375
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.27 E-value=1.6e-09 Score=104.15 Aligned_cols=303 Identities=18% Similarity=0.223 Sum_probs=183.6
Q ss_pred HHHHHHHHHHhCC---CCeEEeCCcHHHHhhhhhccc--------------CCCcEEEEeCCCchHHHHHHHhcC---Ce
Q 040324 149 NELEECVARFVGK---PAAIVFGMGYVTNSSILPVLM--------------GKGSLIISDSLNHNSIVNGARGSG---AT 208 (488)
Q Consensus 149 ~~l~~~la~~~g~---~~~i~~~sGs~a~~~~~~~~~--------------~~~~~Vl~~~~~h~~~~~~~~~~g---~~ 208 (488)
.++-.++.+..|- .+.|+...|+-+|+.++.+.. -|.-++.++.-+|.|+..+++..| -.
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~ 223 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDH 223 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCce
Confidence 4555556666664 378999999999965544321 133345566788999999988887 56
Q ss_pred EEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-cCCCCCCCCChHHHHHHHHHcCcEEEEEcccccc
Q 040324 209 IRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-IYSMEGELCKLPEIITICKRYKAYTYLDEAHSIG 282 (488)
Q Consensus 209 v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g 282 (488)
++.++.+ ++++||+.|.+....| +.. ++++.. --..-|.+.||..|+++|++|+.|+++|.+...|
T Consensus 224 c~~v~t~e~Gkm~~~dLe~kile~k~kg-------~~P-f~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGg 295 (510)
T KOG0629|consen 224 CIKVKTDERGKMIPDDLEKKILEAKAKG-------GVP-FFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGG 295 (510)
T ss_pred eEEecccccCccchHHHHHHHHHHHhcC-------CCC-eEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccc
Confidence 7777765 7999999998876554 122 333311 1112388889999999999999999999998743
Q ss_pred cc-CCCCCCcchhcCCCCCCccEEEcccccccCCcc--cEEEeCHH-HHHHHHhhCCCCcc----------cCCCCHHHH
Q 040324 283 AV-GKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG--GYIAGSKE-LIQYLKYNCPAHLY----------ATSISPPAA 348 (488)
Q Consensus 283 ~~-g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G--g~i~~~~~-~~~~~~~~~~~~~~----------~~~~~p~~~ 348 (488)
.+ .+..+. -..|+++. +-+..+-+|.+|.+- ++.+.+.+ +.+.-.+....+.| -++--.+.|
T Consensus 296 lLmS~k~R~--kl~Giera--~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQC 371 (510)
T KOG0629|consen 296 LLMSRKHRH--KLTGIERA--NSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQC 371 (510)
T ss_pred cccChhhHh--hccCcccc--CceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhc
Confidence 33 222222 33466554 566678899998754 55544433 22222221111111 111111222
Q ss_pred HHHHHH--HHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCC-CeecCCCCCCeEEEEe-CCcc---------------
Q 040324 349 EQIISA--IQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDNDSPVMPIMV-YNPA--------------- 409 (488)
Q Consensus 349 aa~~a~--L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~-~~~~--------------- 409 (488)
..-.-. +-++...++....++.++++.++++||.++|++.+ +..+.....-.+.+.+ +.+.
T Consensus 372 GRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL 451 (510)
T KOG0629|consen 372 GRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRL 451 (510)
T ss_pred CccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHH
Confidence 211111 22233446777888999999999999999999984 3433222111111111 1111
Q ss_pred --hHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeec-CCCCHHHHHHHHHHHHHHHH
Q 040324 410 --KVSSFSRECLKQNVAIVTVGFPATPLLLARARICIS-ASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 410 --~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~-~~~t~edid~~l~~l~~~~~ 465 (488)
-+..+-..|+++|-... +|.-.....+++|+.++ .+.+.+|+|.+++-|+++.+
T Consensus 452 ~kVaPkIK~~Mm~~Gt~Mi--~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 452 VKVAPKIKERMMKKGTTMI--GYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred HhhCcHHHHHHHhccceee--EecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 11256678888887766 33222233467786542 36799999999999987654
No 376
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.27 E-value=2.4e-10 Score=113.50 Aligned_cols=276 Identities=17% Similarity=0.250 Sum_probs=146.7
Q ss_pred CCChhhHHHHHHHHHHHhCCCC--eEEeCCcHHHHhh---hhhcccCCCcEEEEeCCCchHHHHHHHh----cCCeEEEe
Q 040324 142 GGTLALHNELEECVARFVGKPA--AIVFGMGYVTNSS---ILPVLMGKGSLIISDSLNHNSIVNGARG----SGATIRVF 212 (488)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~~--~i~~~sGs~a~~~---~~~~~~~~~~~Vl~~~~~h~~~~~~~~~----~g~~v~~~ 212 (488)
.|..+..-++...++++.|.+- +-+...++.+.++ +.+...+++++|+++...|+.+...++- .|.+++.+
T Consensus 106 QG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~ 185 (429)
T PF02347_consen 106 QGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEV 185 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEe
Confidence 3566666899999999999973 2333333333333 2333334456999999999998875443 46777777
Q ss_pred eCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccc--ccccCCCCCC
Q 040324 213 QHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHS--IGAVGKTGRG 290 (488)
Q Consensus 213 ~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s--~g~~g~~g~~ 290 (488)
+.++-.... . ...++|++.... ..|.+.++++|.++++++|+++|+ .+-- .+++-+.|
T Consensus 186 ~~~~~~~~d----~------------~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pg-- 245 (429)
T PF02347_consen 186 PLDEDGTTD----D------------DDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPG-- 245 (429)
T ss_dssp -BBTTCSB-----S------------TTEEEEEEESS--TTSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GG--
T ss_pred cccccCCcc----c------------cCeEEEEeecCC-CCceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChh--
Confidence 754211111 1 267778776554 347888899999999999999987 5542 22222222
Q ss_pred cchhcCCCCCCccEEEcccccccCC------cc-cEEEeCHHHHHHHHh----------hCCCCc---------------
Q 040324 291 VCELLGVDTSDVDIMMGTFSKSFGS------YG-GYIAGSKELIQYLKY----------NCPAHL--------------- 338 (488)
Q Consensus 291 ~~~~~~v~p~~~di~~~t~sK~~g~------~G-g~i~~~~~~~~~~~~----------~~~~~~--------------- 338 (488)
-+| .||+++. +|.||. |+ |+++.+++++..+.. ...++.
T Consensus 246 ---e~G-----ADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKA 316 (429)
T PF02347_consen 246 ---EYG-----ADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKA 316 (429)
T ss_dssp ---GGT------SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCS
T ss_pred ---hcC-----ccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccch
Confidence 234 3788765 888863 23 899998887665521 001110
Q ss_pred -ccCCCCHHHHH-HHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeE--EEEeCCcchHHH
Q 040324 339 -YATSISPPAAE-QIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVM--PIMVYNPAKVSS 413 (488)
Q Consensus 339 -~~~~~~p~~~a-a~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~--~~~~~~~~~~~~ 413 (488)
...+.+...+| ++..-+..+ +++...++.++...+++|+.++|++. +..+.. .+++ .+.........+
T Consensus 317 tSNIctnqaL~A~~a~~Yl~~~----G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~---~~f~e~v~~~~~~~~~~~ 389 (429)
T PF02347_consen 317 TSNICTNQALLALAAAIYLAYL----GPEGLREIAERIHLNAHYLAERLKKIYGLPFDN---PFFFEFVVVFSKDKEVEE 389 (429)
T ss_dssp TT---SS-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSS---SSBSSEEEEESS-HHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHh----CHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCC---CCceeeeeecCCcHHHHH
Confidence 00012222222 222222232 44567788889999999999999986 333221 2221 111212223334
Q ss_pred HHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHH
Q 040324 414 FSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVI 460 (488)
Q Consensus 414 ~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l 460 (488)
+.+++...|+.. .++ ..+.+-+|+.-.+|+||||+++++|
T Consensus 390 l~~~~~~~gl~~---~~~----~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 390 LLKRGIEGGLNL---RYP----DDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHHTT----EEE---GGG-----SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHHHhcCCCc---ccc----CCCeEEEEccCCCCHHHHHHHHhcC
Confidence 444444555222 222 2348999999999999999999875
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.24 E-value=1.7e-09 Score=105.42 Aligned_cols=327 Identities=15% Similarity=0.164 Sum_probs=209.7
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCe---EEeCCcHHHHhhhhhccc--------CCC
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAA---IVFGMGYVTNSSILPVLM--------GKG 185 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~---i~~~sGs~a~~~~~~~~~--------~~~ 185 (488)
+++..+-+.+.+.++ +......+.+......++-..+|.+++.+.. ..++.||++.+++.+... -..
T Consensus 93 ~~~~~~l~~~~~~k~--N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~ 170 (491)
T KOG1383|consen 93 EPELDKLIMEAYNKF--NPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDK 170 (491)
T ss_pred CcchhhHHHHHHhhc--CccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCC
Confidence 567788888888886 2332233344555667777788888876432 334456666443322211 122
Q ss_pred cEEEEeCCCchHHHHHHHhcCCeEEEeeCC------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCCh
Q 040324 186 SLIISDSLNHNSIVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKL 259 (488)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l 259 (488)
..+++....|.++...++..+.+++.++.. |+..+.+.+.+ +++.++.+.-+.+.|.+.+.
T Consensus 171 p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~e-------------Nti~lv~~~~~~p~G~~e~v 237 (491)
T KOG1383|consen 171 PNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDE-------------NTIMLVGSLPNFPTGEIEDV 237 (491)
T ss_pred ccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhcc-------------ceEEEEEEcCCCCccchhhH
Confidence 457788889999999999888888887755 77777777765 67788888888889999999
Q ss_pred HHHHHHHHH-cCcEEEEEccccccccCCC-CCCcchhcCCCCCCccEEEcccccc-cCCcc-cEEEe-CHHHHH-HH---
Q 040324 260 PEIITICKR-YKAYTYLDEAHSIGAVGKT-GRGVCELLGVDTSDVDIMMGTFSKS-FGSYG-GYIAG-SKELIQ-YL--- 330 (488)
Q Consensus 260 ~~l~~l~~~-~g~~li~DE~~s~g~~g~~-g~~~~~~~~v~p~~~di~~~t~sK~-~g~~G-g~i~~-~~~~~~-~~--- 330 (488)
++|.++.-+ +++.+.+|.+-+ +|=-. +-.....||..-..+.-+..+.+|- |...| ++++- ++++.. .+
T Consensus 238 e~l~~l~~e~w~ipiHvDa~~G--gFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~ 315 (491)
T KOG1383|consen 238 EKLADLLLEIWDIPIHVDACLG--GFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFH 315 (491)
T ss_pred HHHHHHHHHHhCCceeecccCc--cccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEe
Confidence 999999999 999999999866 55422 2222223454323333333445553 33445 66654 343321 11
Q ss_pred ----HhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCeEEEEe
Q 040324 331 ----KYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMV 405 (488)
Q Consensus 331 ----~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 405 (488)
.....+.+...+-+....++.+++|-.+ +.+...+..+++.++.+.|++++++. ++.+++. |.+.+..
T Consensus 316 ~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l----G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk---p~vs~~~ 388 (491)
T KOG1383|consen 316 TDWLGGIYASPTLNGSRPGSQVAAQWAALMSL----GEEGYRENTQNIVETARKLREGIENIKGIKIVGK---PLVSFIL 388 (491)
T ss_pred ccccCccccCcccccCCcccHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhhhccccceecCC---CcEEEEE
Confidence 1111112222223344555666666555 33456778888999999999999987 6667655 4444434
Q ss_pred CCc--chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHH-HHHHHHHHHHHHHHhCCccCC
Q 040324 406 YNP--AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKED-LIEALEVISRIGDLVGIKYFP 473 (488)
Q Consensus 406 ~~~--~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~ed-id~~l~~l~~~~~~~~~~~~~ 473 (488)
... ...-++.+.|.++|..+-..-+| ..+.+|+...++.++ .|+++.-|+++++++.....+
T Consensus 389 ~~s~~~~i~elsd~l~~~GW~lnalq~P------~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~~ 453 (491)
T KOG1383|consen 389 FGSNDVNIFELSDLLRKKGWILNALQFP------AAIHICVTRVHAREDVADRFVADIRKVVEELKSLPES 453 (491)
T ss_pred ccCCccchhhhhHHHHhcCcCccccCCC------CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 332 34558899999999888643333 257788777787777 588888999999888655433
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.24 E-value=9.1e-10 Score=106.81 Aligned_cols=228 Identities=18% Similarity=0.177 Sum_probs=152.7
Q ss_pred cCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEE
Q 040324 111 LGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIIS 190 (488)
Q Consensus 111 lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~ 190 (488)
+|-+--+|+..+++.+.++.+-.- -..........-...+.+.++...+.+++.+++.-+.|++.++.++..++.+|+.
T Consensus 34 lG~s~~~~e~iea~~~~~~~~v~L-e~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis 112 (395)
T COG1921 34 LGRSLYSPEAIEAMKEAMRAPVEL-ETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVS 112 (395)
T ss_pred CCCccCCHHHHHHHHHHhccccee-eeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEE
Confidence 333333678888888887764221 1111111122222456666666667788999999988888888888776555553
Q ss_pred e----CCCchHHHHHHHhcCCeEEEeeCC---CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCCCCCCCCChHHH
Q 040324 191 D----SLNHNSIVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYSMEGELCKLPEI 262 (488)
Q Consensus 191 ~----~~~h~~~~~~~~~~g~~v~~~~~~---d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s~~G~~~~l~~l 262 (488)
- +++|+++...+++.|++.+.+..- ...+++.+|.+. +..++=+ .+=|...| ..+++++
T Consensus 113 ~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~------------ta~llkV~s~~~~f~~-~l~~~~l 179 (395)
T COG1921 113 RGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINEN------------TALLLKVHSSNYGFTG-MLSEEEL 179 (395)
T ss_pred ccccccCCCCChhHHHHHcCCEEEEecccCcCCHHHHHHHhccC------------CeeEEEEeeccccccc-cccHHHH
Confidence 2 168999999999999999887633 678888888762 2222222 22222222 1268889
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCc-ccEEEeCHHHHHHHHhhCCCCcccC
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-GGYIAGSKELIQYLKYNCPAHLYAT 341 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~-Gg~i~~~~~~~~~~~~~~~~~~~~~ 341 (488)
+++|+++|+++|+|.+-. ..-+.-....++.. .+.|+++.|..|.||++ +|.|+|++++++.+....- -++.
T Consensus 180 ~~ia~~~~lpvivD~aSg--~~v~~e~~l~~~la---~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l--~Ral 252 (395)
T COG1921 180 VEIAHEKGLPVIVDLASG--ALVDKEPDLREALA---LGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPL--KRAL 252 (395)
T ss_pred HHHHHHcCCCEEEecCCc--cccccccchhHHHh---cCCCEEEEecchhcCCCccceEechHHHHHHHHhhhh--hhhh
Confidence 999999999999999875 32111111222322 34589999999999875 4999999999998876543 3444
Q ss_pred CCCHHHHHHHHHHHHHHh
Q 040324 342 SISPPAAEQIISAIQVVI 359 (488)
Q Consensus 342 ~~~p~~~aa~~a~L~~i~ 359 (488)
...+..+++..++|+.+.
T Consensus 253 rv~K~tla~l~~aLe~y~ 270 (395)
T COG1921 253 RVDKETLAALEAALELYL 270 (395)
T ss_pred hcCcHhHHHHHHHHHHHc
Confidence 477888899999999874
No 379
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.18 E-value=1.5e-08 Score=96.42 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=145.2
Q ss_pred CCChh-hHHHHHHHHHHHhCCCCeEE---eCCcHHHHhhhhhcccCCCcEEEEeCCC-chHHHHHHHh----------cC
Q 040324 142 GGTLA-LHNELEECVARFVGKPAAIV---FGMGYVTNSSILPVLMGKGSLIISDSLN-HNSIVNGARG----------SG 206 (488)
Q Consensus 142 ~g~~~-~~~~l~~~la~~~g~~~~i~---~~sGs~a~~~~~~~~~~~~~~Vl~~~~~-h~~~~~~~~~----------~g 206 (488)
||+.+ ..+.|++-.|+.++.|++++ +.|||.|...++..++.|||.++.-... |-.....+-. .|
T Consensus 49 YGY~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~G 128 (403)
T PF06838_consen 49 YGYDDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFG 128 (403)
T ss_dssp T-TT-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT
T ss_pred CCCCCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhC
Confidence 34444 44789999999999999887 5699999999999999999998875433 3333333322 23
Q ss_pred CeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCCCCC--CCCChHHHHHHHHHc--CcEEEEE
Q 040324 207 ATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYSMEG--ELCKLPEIITICKRY--KAYTYLD 276 (488)
Q Consensus 207 ~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s~~G--~~~~l~~l~~l~~~~--g~~li~D 276 (488)
.....++.. |.+.+++.++. .++.+.|= ..-|+.-- ++..+++++++.|+. ++++++|
T Consensus 129 i~Y~~v~L~~dg~~D~~~i~~~~~~------------~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVD 196 (403)
T PF06838_consen 129 IKYREVPLTEDGTIDWEAIKKALKP------------NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVD 196 (403)
T ss_dssp -EEEE--B-TTSSB-HHHHHHHHHT------------TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ceeEEEeecCCCCcCHHHHHHhhcc------------CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEe
Confidence 444455432 78888888874 24444442 33333221 122477777777775 7899999
Q ss_pred ccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC----cccEEEeCHHHHHHHHhh--CCCCcccCCCCHHHHHH
Q 040324 277 EAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS----YGGYIAGSKELIQYLKYN--CPAHLYATSISPPAAEQ 350 (488)
Q Consensus 277 E~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~----~Gg~i~~~~~~~~~~~~~--~~~~~~~~~~~p~~~aa 350 (488)
.+|+ -|-.+-. . .. -..|++.+|+=|-.|+ .||||++++++++..... +.+..-..+.+......
T Consensus 197 NCYG--EFvE~~E-P---~~---vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e~G~t~~~~R~ 267 (403)
T PF06838_consen 197 NCYG--EFVETQE-P---TE---VGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKEVGATLGTNRL 267 (403)
T ss_dssp -TTT--TTTSSS--G---GG---GT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGGSS--TTTHHH
T ss_pred CCcc--eeccccC-c---cc---cchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccccccCcchHHH
Confidence 9998 5532211 1 11 2348999999999875 469999999999877532 22211111111112222
Q ss_pred HHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC---C-CeEEEEeCCcchHHHHHHHHHHC
Q 040324 351 IISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND---S-PVMPIMVYNPAKVSSFSRECLKQ 421 (488)
Q Consensus 351 ~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~l~~~ 421 (488)
....|-+ .+....+..+-+-....-++++|+++.+... + -+..+.+.++++...||+...+.
T Consensus 268 ~~QGlFl---------AP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~~e~l~~FC~~iQ~~ 333 (403)
T PF06838_consen 268 MFQGLFL---------APHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGSPEKLIAFCQGIQAA 333 (403)
T ss_dssp HHHHHHH---------HHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SSHHHHHHHHHHHHHT
T ss_pred HHhHHhh---------chHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCCHHHHHHHHHHHHhc
Confidence 3333322 2445555555556667777889999875432 2 46678889999999999998875
No 380
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.16 E-value=1.4e-08 Score=98.64 Aligned_cols=289 Identities=17% Similarity=0.188 Sum_probs=156.1
Q ss_pred HHHHhCCC---CeEEeCCcHHHH-hhhhhcc--cCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC--------CHHHH
Q 040324 155 VARFVGKP---AAIVFGMGYVTN-SSILPVL--MGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN--------TPSHL 220 (488)
Q Consensus 155 la~~~g~~---~~i~~~sGs~a~-~~~~~~~--~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~--------d~~~L 220 (488)
+-+..|.. .++++...+.-. ...+.++ ..+.+.|+.+...|.+...++...|.+++.++.. |.+.+
T Consensus 65 ~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~i 144 (389)
T PF05889_consen 65 ALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAI 144 (389)
T ss_dssp HHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHH
T ss_pred HHHHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHH
Confidence 33445653 467776554433 2222222 3567899999999999999999999998888732 68888
Q ss_pred HHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC-hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCC
Q 040324 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK-LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 221 e~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~-l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
|+++++... ....+|+. .+-...|..++ +.+|.++|++||+..++-.||++=.- ..-.-..+.+. -
T Consensus 145 e~~i~~~G~---------~~iLcvlt-ttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~-~~~~~i~~a~~--~ 211 (389)
T PF05889_consen 145 EAKIEELGA---------DNILCVLT-TTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS-KCMHLIQQAWR--V 211 (389)
T ss_dssp HHHHHHHCG---------GGEEEEEE-ESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H-HHHHHHHHHHH--H
T ss_pred HHHHHHhCC---------CCeEEEEE-ecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH-HHHHHHHHHHh--c
Confidence 888876421 23444443 33333444555 99999999999999999999983000 00000000000 0
Q ss_pred CCccEEEcccccccC--CcccEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 300 SDVDIMMGTFSKSFG--SYGGYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 300 ~~~di~~~t~sK~~g--~~Gg~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
..+|+++-|+.|-|= .+|+.++++ +..+..+...-.+- .+.+|.. - ...+|..+ +......++....+
T Consensus 212 GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~YpGR---as~sp~l-d-~~itLl~L----G~~g~~~ll~~r~~ 282 (389)
T PF05889_consen 212 GRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYPGR---ASASPSL-D-LFITLLSL----GCTGYGALLKERKA 282 (389)
T ss_dssp STCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSHSH---BTSHHHH-H-HHHHHHHH----HHHHHHHHHHHHHH
T ss_pred CCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhhhh---hhcccch-H-HHHHHHHH----hhhHHHHHHHHHHH
Confidence 123677779999883 344555554 56777776532221 1233321 1 12222222 11133455566666
Q ss_pred HHHHHHHHHHhC----CCeecCCCCCCeE-EEEeCC--c---chHHHHHHHHHHCCce---EEeecCCCc-----cCCCC
Q 040324 377 NSNFFRSKLQKM----GFEVLGDNDSPVM-PIMVYN--P---AKVSSFSRECLKQNVA---IVTVGFPAT-----PLLLA 438 (488)
Q Consensus 377 ~~~~l~~~L~~~----g~~~~~~~~~~~~-~~~~~~--~---~~~~~~~~~l~~~Gi~---v~~~~~~~~-----~~~~~ 438 (488)
...++.++|+++ +-.+...+..++. .+.+.. . .....|...|..|||. ++....+.. .....
T Consensus 283 ~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~ 362 (389)
T PF05889_consen 283 SFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCP 362 (389)
T ss_dssp HHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSS
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchH
Confidence 667777777654 4333333333333 222221 1 2356889999998554 332111110 01126
Q ss_pred eEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 439 RARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 439 ~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
++-++-...+|+||+|.++++|+++++
T Consensus 363 Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 363 YLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp EEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 788877788999999999999999874
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.07 E-value=1.3e-07 Score=89.31 Aligned_cols=338 Identities=17% Similarity=0.173 Sum_probs=189.7
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhh
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSIL 178 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~ 178 (488)
+.-+||+-+- .|.+ .+.+....++-.....+++++.. ..|++.+.+.+|.+..+-+.-|-.|-..++
T Consensus 45 edv~IDLLTD--SGTg----ams~~qwaamm~GDEAYagsrs~-------~~L~~avkdifGfq~~iPthQGRgAE~Il~ 111 (471)
T COG3033 45 EDVFIDLLTD--SGTG----AMTDKQWAAMMRGDEAYAGSRSY-------YALADAVKDIFGFQYTIPTHQGRGAENILI 111 (471)
T ss_pred cceEEEeecc--CCcc----cccHHHHHHHhccchhhcccccH-------HHHHHHHHHhcCceeeeeccCCccHHHHHH
Confidence 4667887421 1222 33444444444434455555532 578899999999866666665655533333
Q ss_pred hcc-----cCCCcEEEEeCCCchHHHHH-HHhcCCeEEEee--------------CC-CHHHHHHHHHHHHhcCCCCCCC
Q 040324 179 PVL-----MGKGSLIISDSLNHNSIVNG-ARGSGATIRVFQ--------------HN-TPSHLEEVLREQIAEGQPRTRR 237 (488)
Q Consensus 179 ~~~-----~~~~~~Vl~~~~~h~~~~~~-~~~~g~~v~~~~--------------~~-d~~~Le~~l~~~~~~~~p~~~~ 237 (488)
..+ ..||.+....+.+|..+..+ ....|+.++-+. -| |++.|++.|++...+
T Consensus 112 ~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~------- 184 (471)
T COG3033 112 PILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD------- 184 (471)
T ss_pred HHHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc-------
Confidence 322 24566666666777666555 445565544332 11 899999999885433
Q ss_pred CCceE-EEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccc-c-cc------CCCCCCcchhcCCCCCCccEE
Q 040324 238 PWKKI-MVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSI-G-AV------GKTGRGVCELLGVDTSDVDIM 305 (488)
Q Consensus 238 ~~~~~-~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~-g-~~------g~~g~~~~~~~~v~p~~~di~ 305 (488)
++. ++++-..++.+|..+ .++++.++|++||+.++.|.+... . .| |.....+.++..-.-.-.|-.
T Consensus 185 --nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~ 262 (471)
T COG3033 185 --NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGC 262 (471)
T ss_pred --cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhh
Confidence 232 333445666677655 689999999999999999998641 0 11 111111111100000112333
Q ss_pred Ecccccc-cCCcccEEEeCHH----HHHHHHhhC---CC-CcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHH
Q 040324 306 MGTFSKS-FGSYGGYIAGSKE----LIQYLKYNC---PA-HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376 (488)
Q Consensus 306 ~~t~sK~-~g~~Gg~i~~~~~----~~~~~~~~~---~~-~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~ 376 (488)
..|.-|- +-..||+++.+++ +....+... .+ -+|+ ++..-.+.+....|..-. + .+.+++-.+
T Consensus 263 ~mS~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYG-gl~GrdmealAvGL~e~~------~-~~yl~~Rv~ 334 (471)
T COG3033 263 TMSAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYG-GLAGRDMEALAVGLREGV------N-FDYLAHRVA 334 (471)
T ss_pred eeeccccceeccccEEEecCccHHHHHHHHHhheEeeccccccC-cccchhHHHHHHHHHHhc------C-cHHHHHHHH
Confidence 3355554 3456899988765 333333221 11 1232 122222222222333211 1 233333344
Q ss_pred HHHHHHHHHHhCCCeecCCCCCCeEEEEeC---C----c-chHHHHHHHHHHC-CceEEeecCCC---cc-------CCC
Q 040324 377 NSNFFRSKLQKMGFEVLGDNDSPVMPIMVY---N----P-AKVSSFSRECLKQ-NVAIVTVGFPA---TP-------LLL 437 (488)
Q Consensus 377 ~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~---~----~-~~~~~~~~~l~~~-Gi~v~~~~~~~---~~-------~~~ 437 (488)
..+||.++|.+.|++++.+.+++.+.+... + . -.+..++-+|..+ ||-.+..|--. .+ ...
T Consensus 335 Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~ 414 (471)
T COG3033 335 QVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPA 414 (471)
T ss_pred HHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCch
Confidence 568999999999999988888876555431 0 0 1344677777766 88887643211 11 112
Q ss_pred CeEEEeecC-CCCHHHHHHHHHHHHHHHHH
Q 040324 438 ARARICISA-SHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 438 ~~iRi~~~~-~~t~edid~~l~~l~~~~~~ 466 (488)
..+|+++|- .-|.+.+|..+++++++.+.
T Consensus 415 elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 415 ELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred heeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 579999864 46899999999999988765
No 382
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.05 E-value=3.8e-10 Score=108.58 Aligned_cols=252 Identities=19% Similarity=0.199 Sum_probs=58.9
Q ss_pred CccchHHHHHHHHHcCCCCCCcccCCC-ChhhHHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCC--
Q 040324 117 DEYCTPRVIDSLKKYSHSTCSSRVDGG-TLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSL-- 193 (488)
Q Consensus 117 ~~~v~~a~~~~l~~~~~~~~~~~~~~g-~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~-- 193 (488)
++++.+++.+.+..|..--. ....| ....+..+++.++.+.|.++++++++.+.|+..++.++...+ .|+++..
T Consensus 19 ~~~a~~a~~~~a~~Y~nLE~--dl~~G~Rg~R~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~~~-EvIvsRGel 95 (367)
T PF03841_consen 19 SEEAIEAVAEVASGYSNLEY--DLETGKRGSRYAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAKGK-EVIVSRGEL 95 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence 57777787777766532110 00001 112235788899999999999999999888887777776443 4444332
Q ss_pred ----CchHHHHHHHhcCCeEEEeeCC---CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc-CcCCCCCC--CCChHHHH
Q 040324 194 ----NHNSIVNGARGSGATIRVFQHN---TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE-GIYSMEGE--LCKLPEII 263 (488)
Q Consensus 194 ----~h~~~~~~~~~~g~~v~~~~~~---d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e-~v~s~~G~--~~~l~~l~ 263 (488)
....+...++.+|++.+.+-.. .+.|.+++|.+. +.+++-+- +=|...|. -+++++++
T Consensus 96 VeiGgsFRip~vm~~sGa~lvEVGttN~t~~~Dye~AI~e~------------Ta~ll~Vh~Sn~~i~GFt~~~~~~el~ 163 (367)
T PF03841_consen 96 VEIGGSFRIPDVMRQSGARLVEVGTTNRTHLSDYEKAITEN------------TAALLKVHTSNFRIQGFTGEVSLEELA 163 (367)
T ss_dssp -----------------------------------------------------------------------------HHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccc------------ccccccccccccccccccccccHHHHH
Confidence 2223455677788888776533 477778887652 33333332 22222231 23799999
Q ss_pred HHHHHcCcEEEEEcccccc----ccCCCCCC-cchhcCCCCCCccEEEcccccccCCcc-cEEEeCHHHHHHHHhhCCCC
Q 040324 264 TICKRYKAYTYLDEAHSIG----AVGKTGRG-VCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQYLKYNCPAH 337 (488)
Q Consensus 264 ~l~~~~g~~li~DE~~s~g----~~g~~g~~-~~~~~~v~p~~~di~~~t~sK~~g~~G-g~i~~~~~~~~~~~~~~~~~ 337 (488)
+++++|++++|+|-.-+.. .+|-.... +.++ -..++|+++.|-.|.+|++- |.|+|++++++.++...-.
T Consensus 164 ~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~---~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~pl~- 239 (367)
T PF03841_consen 164 ELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEY---LAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHPLG- 239 (367)
T ss_dssp HHHHHHT--EEEE-TTHHHHHHHTT----------C---CCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHHHT-
T ss_pred HHHhhcCCcEEEECCCCCCcCcccccCccccHHHHH---hhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCCCc-
Confidence 9999999999999886310 12222222 2222 23567999999999999865 9999999999999865322
Q ss_pred cccCCCCHHHHHHHHHHHHHHhccCCC-c------hHHHHHHHHHHHHHHHHHHHHhC
Q 040324 338 LYATSISPPAAEQIISAIQVVIGEDGS-C------RGAQKLARIRENSNFFRSKLQKM 388 (488)
Q Consensus 338 ~~~~~~~p~~~aa~~a~L~~i~~~~~~-~------~~~~~~~~~~~~~~~l~~~L~~~ 388 (488)
-..-..-..+++..++|+.....+.. + ....-.+.++++++.|...|+..
T Consensus 240 -RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 240 -RALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp -TT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred -ceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 22336778888888999876431111 1 12233445555566666665543
No 383
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.04 E-value=6.1e-08 Score=104.56 Aligned_cols=276 Identities=15% Similarity=0.209 Sum_probs=166.3
Q ss_pred CCChhhHHHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhc--cc-CCCcEEEEeCCCchHHHHHHH----hcCCeEEEe
Q 040324 142 GGTLALHNELEECVARFVGKP--AAIVFGMGYVTNSSILPV--LM-GKGSLIISDSLNHNSIVNGAR----GSGATIRVF 212 (488)
Q Consensus 142 ~g~~~~~~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~--~~-~~~~~Vl~~~~~h~~~~~~~~----~~g~~v~~~ 212 (488)
.|..+..-++...++++.|.+ .+-+.--++.+.++++.+ .. .+...|+++...|+.+...++ ..|.+++.
T Consensus 120 QG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~- 198 (954)
T PRK12566 120 QGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV- 198 (954)
T ss_pred hHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-
Confidence 355666678999999999987 344554555444332222 22 335689999999999876543 33555543
Q ss_pred eCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccc--cccccCCCCCC
Q 040324 213 QHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAH--SIGAVGKTGRG 290 (488)
Q Consensus 213 ~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~--s~g~~g~~g~~ 290 (488)
+++++.+.+ ..+.|++.... ..|.+.++++|.+++++.|+++| +.+. +.+.+-+.|.
T Consensus 199 -----~~~~~~~~~-------------~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~~Pge- 257 (954)
T PRK12566 199 -----DAVDNLAAH-------------AVFGALLQYPD-THGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLTPPGE- 257 (954)
T ss_pred -----cchhhcCCC-------------CEEEEEEECCC-CceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCCChhh-
Confidence 344443322 45666663322 34888899999999999999866 3332 3334433332
Q ss_pred cchhcCCCCCCccEEEcc---cccccCCcc---cEEEeCHHHHHHHHhh----------CCCCccc----------C-CC
Q 040324 291 VCELLGVDTSDVDIMMGT---FSKSFGSYG---GYIAGSKELIQYLKYN----------CPAHLYA----------T-SI 343 (488)
Q Consensus 291 ~~~~~~v~p~~~di~~~t---~sK~~g~~G---g~i~~~~~~~~~~~~~----------~~~~~~~----------~-~~ 343 (488)
+| .||++++ |+=.+|.+| |+++.+++++..+... ..++..+ . ..
T Consensus 258 ----~G-----ADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAt 328 (954)
T PRK12566 258 ----LG-----ADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKAN 328 (954)
T ss_pred ----cC-----CcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhcccc
Confidence 33 3788652 333333333 9999988776654210 0000000 0 00
Q ss_pred CHHHHHHH----HHHHH-HHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEE-EEeCCcchHHHHHHH
Q 040324 344 SPPAAEQI----ISAIQ-VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMP-IMVYNPAKVSSFSRE 417 (488)
Q Consensus 344 ~p~~~aa~----~a~L~-~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 417 (488)
+.++.+++ .+++- .+ .+++...++.++...++.+|.++|++.|+++... ++|- +.+.......++.++
T Consensus 329 SNICT~qaL~A~~a~~Y~~~---~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~---~fF~~~~v~~~~~~~~~~~~ 402 (954)
T PRK12566 329 SNICTAQVLLANIAGFYAVY---HGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR---HFFDTLTLEVGGAQAAIIES 402 (954)
T ss_pred chhhHHHHHHHHHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CccceEEEEccCCHHHHHHH
Confidence 11111221 12211 22 2444566777788889999999999999887543 3221 112122146688889
Q ss_pred HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 418 CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 418 l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
.+++||-++.+. .+.+.+++.-.+|.+|++.+++++.
T Consensus 403 a~~~~~n~r~~~-------~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 403 AEAARINLRILG-------RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred HHHCCCeeEEeC-------CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 999999888532 3579999999999999999999995
No 384
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.04 E-value=1.6e-08 Score=101.67 Aligned_cols=296 Identities=17% Similarity=0.197 Sum_probs=189.9
Q ss_pred CChhhHHHHHHHHHHHhCCCC-eEEeCCcHHHH---hhhhhccc-----CCCcEEEEeCCCchHHHHHHHhcCCeEEEee
Q 040324 143 GTLALHNELEECVARFVGKPA-AIVFGMGYVTN---SSILPVLM-----GKGSLIISDSLNHNSIVNGARGSGATIRVFQ 213 (488)
Q Consensus 143 g~~~~~~~l~~~la~~~g~~~-~i~~~sGs~a~---~~~~~~~~-----~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~ 213 (488)
|+.+...+|++.|++..|.+. ++--+||++.- +.+++++. +...+.+++-..|+.....+.+.|.+++++.
T Consensus 579 GY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~ 658 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVG 658 (1001)
T ss_pred hHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEee
Confidence 667777899999999999876 56677887643 56677764 2345778899999999999999999999987
Q ss_pred CC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC-ChHHHHHHHHHcCcEEEEEccccccccC--
Q 040324 214 HN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC-KLPEIITICKRYKAYTYLDEAHSIGAVG-- 285 (488)
Q Consensus 214 ~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~-~l~~l~~l~~~~g~~li~DE~~s~g~~g-- 285 (488)
.. |+.+|+++.+++.. .-+++++.-. |..|... .+++++++.++||.-+++|.+-.-...|
T Consensus 659 ~~~~G~id~~dLk~kaekh~~----------~Laa~MvTYP-ST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc 727 (1001)
T KOG2040|consen 659 CDANGNIDMVDLKAKAEKHKD----------NLAALMVTYP-STHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLC 727 (1001)
T ss_pred ccCCCCccHHHHHHHHHHhhh----------hhheeEEecc-cccccccccHHHHHHHHHhcCCEEEecCCCccceeccc
Confidence 43 89999999887533 4455555211 2235555 4999999999999999999986432333
Q ss_pred CCCCCcchhcCCCCCCccEEEccccccc----CC--cc-cEEEeCHHHHHHHHhhC---------CCCcccCCC----CH
Q 040324 286 KTGRGVCELLGVDTSDVDIMMGTFSKSF----GS--YG-GYIAGSKELIQYLKYNC---------PAHLYATSI----SP 345 (488)
Q Consensus 286 ~~g~~~~~~~~v~p~~~di~~~t~sK~~----g~--~G-g~i~~~~~~~~~~~~~~---------~~~~~~~~~----~p 345 (488)
+.|. +| .|+.-..++|.| |+ +| |-|...+.+...+.... .....+.+. +.
T Consensus 728 ~pGd-----~G-----aDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa 797 (1001)
T KOG2040|consen 728 RPGD-----IG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSA 797 (1001)
T ss_pred CCcc-----cc-----ccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcc
Confidence 2221 12 244444788887 33 23 55666666655553211 000111112 22
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEE---EEeC-----CcchHHHHHHH
Q 040324 346 PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMP---IMVY-----NPAKVSSFSRE 417 (488)
Q Consensus 346 ~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~---~~~~-----~~~~~~~~~~~ 417 (488)
..+...++-++.+ +.....+.-+-..-|++|+.++|+..--.++....+.+.. +.+. ....+.+++++
T Consensus 798 ~ILpISwaYikmM----G~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKR 873 (1001)
T KOG2040|consen 798 LILPISWAYIKMM----GSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKR 873 (1001)
T ss_pred eeehhHHHHHHHh----cccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHH
Confidence 3333345556654 2233444444556688999999987632333333332211 1111 12346689999
Q ss_pred HHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHh
Q 040324 418 CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467 (488)
Q Consensus 418 l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~ 467 (488)
|++.|+..-...+|.. +.+-|-|.-.-+++|+|++++++-.+-+++
T Consensus 874 L~DYgFHaPTmswPV~----gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 874 LMDYGFHAPTMSWPVA----GTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred HHhccCCCCccccccC----CceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 9999987654444432 678898988888999999999998776654
No 385
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.99 E-value=2.1e-07 Score=86.04 Aligned_cols=334 Identities=14% Similarity=0.113 Sum_probs=192.8
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHHcCCCCCCcccCCCChhhH---HHHHHHHHHHhCCC-CeEEeCCcHHHH
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALH---NELEECVARFVGKP-AAIVFGMGYVTN 174 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~---~~l~~~la~~~g~~-~~i~~~sGs~a~ 174 (488)
.+..+-|++|. +|+- +....+.+.+-++++....... ...|-.++. +..-..++...|.. +.+.+.+.-.+|
T Consensus 65 d~~~iYlcGNS-LGLm--PK~t~~~~~~eLDkWak~av~g-H~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvN 140 (465)
T KOG3846|consen 65 DKPVIYLCGNS-LGLM--PKSTRNSINAELDKWAKCAVEG-HFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVN 140 (465)
T ss_pred CCCeEEEeccc-cccC--chhhHhHHHHHHHHHHhhhhhc-ccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhH
Confidence 46677777543 6766 4455666666677642211000 111322222 45666777888863 445555555566
Q ss_pred hh-hhhccc---CCCcEEEEeCCCchH----HHHHHHhcCCeE----EEeeCC------CHHHHHHHHHHHHhcCCCCCC
Q 040324 175 SS-ILPVLM---GKGSLIISDSLNHNS----IVNGARGSGATI----RVFQHN------TPSHLEEVLREQIAEGQPRTR 236 (488)
Q Consensus 175 ~~-~~~~~~---~~~~~Vl~~~~~h~~----~~~~~~~~g~~v----~~~~~~------d~~~Le~~l~~~~~~~~p~~~ 236 (488)
.. ++..+. .++-+|+.....+++ +...+++.|..+ +.+... -.+++-+.|++.
T Consensus 141 lh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkn--------- 211 (465)
T KOG3846|consen 141 LHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKN--------- 211 (465)
T ss_pred HHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhc---------
Confidence 43 333333 344567777655544 555566666542 112211 234444555543
Q ss_pred CCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCC-
Q 040324 237 RPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS- 315 (488)
Q Consensus 237 ~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~- 315 (488)
+...++|...+|+--+|...++.+|-..-+..|+++=.|-+|++|-..- -+...++|+.+.+--|-+..
T Consensus 212 -gDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL---------~LHdWgVDFACWCSYKYlnaG 281 (465)
T KOG3846|consen 212 -GDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPL---------QLHDWGVDFACWCSYKYLNAG 281 (465)
T ss_pred -CCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCce---------EEeecCCceEEEeeecccccC
Confidence 2367888889999999999999999987788899999999998654431 11125568888888898732
Q ss_pred -cc--cEEEeCHHHHHHHHhhC---------------------CCCcccCCCCHH-HHHHHHHHHHHHhccCCCchHHHH
Q 040324 316 -YG--GYIAGSKELIQYLKYNC---------------------PAHLYATSISPP-AAEQIISAIQVVIGEDGSCRGAQK 370 (488)
Q Consensus 316 -~G--g~i~~~~~~~~~~~~~~---------------------~~~~~~~~~~p~-~~aa~~a~L~~i~~~~~~~~~~~~ 370 (488)
+| |..+-.+...+...... ....|.-+.+|+ ..++..++|+++.. -..+++
T Consensus 282 aGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q----~~~~~l 357 (465)
T KOG3846|consen 282 AGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQ----FNINEL 357 (465)
T ss_pred CCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHH----hhHHHH
Confidence 22 55554433222221100 001122234554 44556678888731 123444
Q ss_pred HHHHHHHHHHHHHHHHhC-C-----------CeecCC----CCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCcc
Q 040324 371 LARIRENSNFFRSKLQKM-G-----------FEVLGD----NDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATP 434 (488)
Q Consensus 371 ~~~~~~~~~~l~~~L~~~-g-----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 434 (488)
+.+-.-...|+..-++.. | +.+..+ ..+....+.+.. ....+.++|.++|+.+..
T Consensus 358 RkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss--p~~~vfqeL~krGv~~Dk------- 428 (465)
T KOG3846|consen 358 RKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS--PTPKVFQELHKRGVIGDK------- 428 (465)
T ss_pred hhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC--CchHHHHHHHHcCeeccc-------
Confidence 444444445554444432 2 112222 123333344433 345799999999998863
Q ss_pred CCCCeEEEee-cCCCCHHHHHHHHHHHHHHHHHhC
Q 040324 435 LLLARARICI-SASHTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 435 ~~~~~iRi~~-~~~~t~edid~~l~~l~~~~~~~~ 468 (488)
...|.||+.| |+..|-.|+-.++++|.+++..+.
T Consensus 429 R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 429 RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 2247899996 788999999999999999988763
No 386
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.79 E-value=3e-06 Score=82.84 Aligned_cols=298 Identities=14% Similarity=0.121 Sum_probs=169.9
Q ss_pred ChhhHHHHHHHHHHHhCC---------------CCeEEeCCcHHHHhhhhhccc-------C------------CCcEEE
Q 040324 144 TLALHNELEECVARFVGK---------------PAAIVFGMGYVTNSSILPVLM-------G------------KGSLII 189 (488)
Q Consensus 144 ~~~~~~~l~~~la~~~g~---------------~~~i~~~sGs~a~~~~~~~~~-------~------------~~~~Vl 189 (488)
.+|...|||.-+.+|+++ .-.++..|.+++++.++.+.. + ..-++.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 455667888777777653 236777888898844332211 1 123566
Q ss_pred EeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC--CCCChHHH
Q 040324 190 SDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG--ELCKLPEI 262 (488)
Q Consensus 190 ~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G--~~~~l~~l 262 (488)
+.+-.|.++..++...+.+.+.++.+ ..+.|+++|++.+..|- +-++++ ..++.+| ...+|.+|
T Consensus 187 ~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGl--------IPf~v~-at~GTT~~ca~D~l~el 257 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGL--------IPFFVC-ATLGTTSSCAFDELEEL 257 (511)
T ss_pred ecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCC--------ccEEEE-EeecCccccccccHHHh
Confidence 77889999999999998888877754 68999999999877652 223333 2223333 24479999
Q ss_pred HHHHHHcCcEEEEEccccccccCCCCCCcchhc-----CCCCCCccEEEcccccccCCc----c-----c-----EEEeC
Q 040324 263 ITICKRYKAYTYLDEAHSIGAVGKTGRGVCELL-----GVDTSDVDIMMGTFSKSFGSY----G-----G-----YIAGS 323 (488)
Q Consensus 263 ~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~-----~v~p~~~di~~~t~sK~~g~~----G-----g-----~i~~~ 323 (488)
..+|+++|+||++|.+|+...+. |+.+ |++ .+|-+-...+|.+-.- . | +.-.+
T Consensus 258 g~Vc~~~glWLHVDAAYAGsa~i------CpE~r~l~rGie--~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vd 329 (511)
T KOG0628|consen 258 GPVCREEGLWLHVDAAYAGSAFI------CPEFRYLMRGIE--YADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVD 329 (511)
T ss_pred cchhhhcCEEEEeehhhcccccc------CHHHHHHhhcch--hhccccCChhheeEEeeeeecceeecCceeeeeeecC
Confidence 99999999999999999843332 2221 332 2344555667765210 0 1 11122
Q ss_pred HHHHHHHHhhC-CCCcccCCCCHH----HHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCC
Q 040324 324 KELIQYLKYNC-PAHLYATSISPP----AAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDND 397 (488)
Q Consensus 324 ~~~~~~~~~~~-~~~~~~~~~~p~----~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~ 397 (488)
+...++-.... ..+.+- .-|. -.--..-+++.+ +.+...+.+.+..+.++.|.+-+.+- .|++..+.-
T Consensus 330 p~yL~h~~~~~~~Dyrhw--qipl~rRfRSLKlWfv~R~~----Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~ 403 (511)
T KOG0628|consen 330 PLYLKHAYQGSAPDYRHW--QIPLGRRFRSLKLWFVLRSY----GVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRI 403 (511)
T ss_pred hHhhcchhhccCCCcccc--ccccccchhhHHHHHHHHHH----hHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccc
Confidence 22222221111 111100 1111 111122334443 22223333333344444444444332 456654433
Q ss_pred CCeEEEEeCC-cchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCC-CCHHHHHHHHHHHHHHHHHhC
Q 040324 398 SPVMPIMVYN-PAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISAS-HTKEDLIEALEVISRIGDLVG 468 (488)
Q Consensus 398 ~~~~~~~~~~-~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~-~t~edid~~l~~l~~~~~~~~ 468 (488)
-.++.+.+.. ......+.+++... .|.+++.. -.+.-.+|+++... .+.+|+++.-+.|.+....+.
T Consensus 404 lgLvcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~----l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 404 LGLVCFRLKGDNEINEALLNRLNSSGRIHLVPAS----LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred cceeEEeecCCcHHHHHHHHHHHhcCcEEEEEee----ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 3334444433 33455788888777 77777533 34456899998554 567899999999999887753
No 387
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.50 E-value=1e-05 Score=75.34 Aligned_cols=276 Identities=13% Similarity=0.112 Sum_probs=155.4
Q ss_pred EEeCCcHHHHhhh---hhcccCCCcEEEEeCCCchHHHHHHHhcC-CeEEEeeCC-------CHHHHHHHHHHHHhcCCC
Q 040324 165 IVFGMGYVTNSSI---LPVLMGKGSLIISDSLNHNSIVNGARGSG-ATIRVFQHN-------TPSHLEEVLREQIAEGQP 233 (488)
Q Consensus 165 i~~~sGs~a~~~~---~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g-~~v~~~~~~-------d~~~Le~~l~~~~~~~~p 233 (488)
+-.-||+.|+-.. +..... ...|.++.|.+......+.-.| .++..+++- |++.+-..|+.+
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A------ 175 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA------ 175 (410)
T ss_pred eeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC------
Confidence 4445788887332 233334 4569999999999988888887 445555432 566666555543
Q ss_pred CCCCCCceEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCCCCCC-----cchhcCCCCCCccEE
Q 040324 234 RTRRPWKKIMVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG-----VCELLGVDTSDVDIM 305 (488)
Q Consensus 234 ~~~~~~~~~~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~-----~~~~~~v~p~~~di~ 305 (488)
|...++++....++++|.=+ ....|.++-++.+..-++|-+|- ||. +|.. +..+| ++...--++
T Consensus 176 ----Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQ--GfA-SGD~~~DawAiR~f-V~~g~e~fv 247 (410)
T KOG1412|consen 176 ----PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQ--GFA-SGDLDADAWAIRYF-VEQGFELFV 247 (410)
T ss_pred ----CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhc--ccc-cCCccccHHHHHHH-HhcCCeEEE
Confidence 33444555566688887533 47889999999999999999998 553 2222 22222 221111467
Q ss_pred EcccccccCCcc------cEEEeCHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCC-c---hHHHHHHHHH
Q 040324 306 MGTFSKSFGSYG------GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGS-C---RGAQKLARIR 375 (488)
Q Consensus 306 ~~t~sK~~g~~G------g~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~-~---~~~~~~~~~~ 375 (488)
.-||+|-||..+ -+++-++..+..+.....-..-+.-.||++..|- -+-+++...... + ....+-.|+.
T Consensus 248 ~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGAr-IV~kvL~tP~lre~W~~sik~MssRI~ 326 (410)
T KOG1412|consen 248 CQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGAR-IVHKVLSTPELREQWIQSIKTMSSRIK 326 (410)
T ss_pred EhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhH-HHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 789999999744 5556666665544322110011111233332221 122333211110 1 1233445667
Q ss_pred HHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHC-CceEEeecCCCccCCCCeEEEeecCCCCHHHHH
Q 040324 376 ENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPATPLLLARARICISASHTKEDLI 454 (488)
Q Consensus 376 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid 454 (488)
+++..|++.|..++-+-.-+.-...+.++.+.. ....-.+.|.++ .|++.+ .+ ||+++ ..+...+|
T Consensus 327 ~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTG-Ltp~qV~~li~~h~vyLl~---------~G--RInis-GLN~~Nve 393 (410)
T KOG1412|consen 327 KMRTALRDHLVALKTPGTWDHITQQIGMFSYTG-LTPAQVDHLIENHKVYLLS---------DG--RINIS-GLNMKNVE 393 (410)
T ss_pred HHHHHHHHHHHhcCCCCcHHHHHhhccceeecC-CCHHHHHHHHHhceEEEec---------CC--cEeee-ccccccHH
Confidence 777777777777642211000001111222222 233556677776 888873 12 55553 46778899
Q ss_pred HHHHHHHHHHHHhCC
Q 040324 455 EALEVISRIGDLVGI 469 (488)
Q Consensus 455 ~~l~~l~~~~~~~~~ 469 (488)
+..++|+++++.+..
T Consensus 394 yVAkAIde~Vr~~~~ 408 (410)
T KOG1412|consen 394 YVAKAIDETVRAIKS 408 (410)
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999887753
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.49 E-value=5.5e-05 Score=72.58 Aligned_cols=321 Identities=15% Similarity=0.135 Sum_probs=182.5
Q ss_pred eEEeccccccCCCCCCccchHHHHHHHHHc-CCCC----CCcccCCCChhhHHHHHHHHHHHhCCCC---eEEeCCcHHH
Q 040324 102 CLNLGSYNYLGFAAADEYCTPRVIDSLKKY-SHST----CSSRVDGGTLALHNELEECVARFVGKPA---AIVFGMGYVT 173 (488)
Q Consensus 102 ~ld~~s~~~lg~~~~~~~v~~a~~~~l~~~-~~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sGs~a 173 (488)
..||+ .|-+.-+|++.+.+++-+..+ |.+. .+.|... ....+.+.++.+.++++.++ ++|+..|..+
T Consensus 6 ~~nFs----aGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~-~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~ 80 (365)
T COG1932 6 VYNFS----AGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKE-FKNVLEEAEKDLRELLNIPDDYKVLFLQGGATG 80 (365)
T ss_pred CCCCC----CCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCccHH
Confidence 45666 344444677777777766553 2221 1122221 23455788889999998863 5555555444
Q ss_pred H-hhhhhcccCCCcEEEEeCCCchHHHHH-HHhcCCeEEEe-------eCCCHHHHHHHHHHHHhcCCCCCCCCCceE-E
Q 040324 174 N-SSILPVLMGKGSLIISDSLNHNSIVNG-ARGSGATIRVF-------QHNTPSHLEEVLREQIAEGQPRTRRPWKKI-M 243 (488)
Q Consensus 174 ~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~-~~~~g~~v~~~-------~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~-~ 243 (488)
- .++...+.+++..-.++..+|...... ++..+..+... .+..+.++.+.-- ..+.+ +
T Consensus 81 qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~~------------~~~~ayv 148 (365)
T COG1932 81 QFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWDF------------SDNDAYV 148 (365)
T ss_pred HHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhccc------------CCCccEE
Confidence 3 444444444433213445555544322 22222111111 0111112211100 01222 2
Q ss_pred EEE--cCcCCCCCCCCC-hHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccCCcc-cE
Q 040324 244 VVV--EGIYSMEGELCK-LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GY 319 (488)
Q Consensus 244 vi~--e~v~s~~G~~~~-l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~~G-g~ 319 (488)
.++ |++. |+-.+ .+.+- . +.++++|-.-. .+++ .++-.+.|++..+--|-+|+.| +.
T Consensus 149 ~~~~NeTi~---Gv~v~~~p~~~---~--~~~~v~D~SS~--ilsr---------~iDvsk~dviyagaQKnlGpaGltv 209 (365)
T COG1932 149 HFCWNETIS---GVEVPELPDIG---S--DGLLVADASSA--ILSR---------PIDVSKYDVIYAGAQKNLGPAGLTV 209 (365)
T ss_pred EEecCCccc---ceEccCCCCCC---C--CceEEEecccH--HhcC---------CCChhHcceEEEehhhccCccceEE
Confidence 222 4444 33222 22221 1 28899998877 4442 3444556888889999999988 88
Q ss_pred EEeCHHHHHHHHhhC------------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHh
Q 040324 320 IAGSKELIQYLKYNC------------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK 387 (488)
Q Consensus 320 i~~~~~~~~~~~~~~------------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 387 (488)
++.++++.++..... ...+|. +.+..+......+++.+.... ..+.+.++-+++++.|.+.+.+
T Consensus 210 vIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yN-TPptfa~y~~~lv~~Wlk~~G---Gl~~~~~rn~~ka~~LY~~id~ 285 (365)
T COG1932 210 VIVRPDLLERAESYTLPSIFDYLTHADNGSMYN-TPPTFAWYLLGLVFKWLKSQG---GLEALEARNQAKAQLLYDWIDK 285 (365)
T ss_pred EEEcHHHHhcccccCCchHhhchhhhccCCccC-CcHHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHHHHHHHHh
Confidence 899999888775431 112222 122223334556777775332 4567788889999999999988
Q ss_pred CCCe---ecCCCCC-CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 388 MGFE---VLGDNDS-PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 388 ~g~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
.++- +.....+ .-+++.+.+......|..++.++|+.... |+... +.+|+++-.++..|+++.+++-++.+
T Consensus 286 s~fy~~~v~~~~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lk-Ghr~v----gGmRasiynA~~~e~veaL~~fm~~f 360 (365)
T COG1932 286 SDFYRNLVAKANRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLK-GHRSV----GGLRASIYNAVPLEDVEALTDFMDWF 360 (365)
T ss_pred CCccccccchhhccceeEEEEcCcHHHHHHHHHHHHHcCCceec-cccCC----CceeeeeecCCCHHHHHHHHHHHHHH
Confidence 7542 2222233 33456666666677899999999887763 32222 34999999999999999999999988
Q ss_pred HHHh
Q 040324 464 GDLV 467 (488)
Q Consensus 464 ~~~~ 467 (488)
.++.
T Consensus 361 ~~~~ 364 (365)
T COG1932 361 EETY 364 (365)
T ss_pred HHhh
Confidence 7654
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.47 E-value=2.9e-05 Score=72.02 Aligned_cols=249 Identities=17% Similarity=0.223 Sum_probs=147.4
Q ss_pred CChh-hHHHHHHHHHHHhCCCCeEE---eCCcHHHHhhhhhcccCCCcEEEEeCCC-chHHHHHHHhc----------CC
Q 040324 143 GTLA-LHNELEECVARFVGKPAAIV---FGMGYVTNSSILPVLMGKGSLIISDSLN-HNSIVNGARGS----------GA 207 (488)
Q Consensus 143 g~~~-~~~~l~~~la~~~g~~~~i~---~~sGs~a~~~~~~~~~~~~~~Vl~~~~~-h~~~~~~~~~~----------g~ 207 (488)
|+.+ ..+.|++-.|+.+|.|.+++ +-||+.|...++..++.|||..+.-... |......+-+. |.
T Consensus 61 GydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi 140 (416)
T COG4100 61 GYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGI 140 (416)
T ss_pred CccccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCc
Confidence 4444 33678888999999987554 5699999999999999999987764433 33333322222 22
Q ss_pred eEEEeeCC-----CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCCCC--CCCCChHHHHHHHHHc--CcEEEEEc
Q 040324 208 TIRVFQHN-----TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYSME--GELCKLPEIITICKRY--KAYTYLDE 277 (488)
Q Consensus 208 ~v~~~~~~-----d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s~~--G~~~~l~~l~~l~~~~--g~~li~DE 277 (488)
....++.. |.+.++..+.+ .++.+-|- ..-|+.- =.+..+++++.+.|+- ++++++|.
T Consensus 141 ~Y~~v~Lt~~gkiD~~~v~~~i~~------------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDN 208 (416)
T COG4100 141 KYKAVPLTADGKIDIQAVKTAISD------------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDN 208 (416)
T ss_pred ceeecccccCCcccHHHHHHhcCc------------cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEec
Confidence 33333322 78888877764 13433332 2223222 1233578888888875 68999999
Q ss_pred cccccccCCCCCCcchhcCCCCCCccEEEcccccccCC----cccEEEeCHHHHHHHHhhC-CCCcccCCCCHHHHHHHH
Q 040324 278 AHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGS----YGGYIAGSKELIQYLKYNC-PAHLYATSISPPAAEQII 352 (488)
Q Consensus 278 ~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g~----~Gg~i~~~~~~~~~~~~~~-~~~~~~~~~~p~~~aa~~ 352 (488)
+|+ -|-.+-. -.. -..|++.+|+-|.-|+ .|||+++++++++.-...- .+.+....+ +.+
T Consensus 209 CYG--EFvE~~E----Pt~---vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~G------at~ 273 (416)
T COG4100 209 CYG--EFVEEKE----PTH---VGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGG------ATL 273 (416)
T ss_pred cch--hhhhccC----ccc---cchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCCcccccc------ccH
Confidence 998 5532111 111 2348999999998875 4599999999988653211 111111111 222
Q ss_pred HHHHH-HhccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCC----CCeEEEEeCCcchHHHHHHHHHHC
Q 040324 353 SAIQV-VIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDND----SPVMPIMVYNPAKVSSFSRECLKQ 421 (488)
Q Consensus 353 a~L~~-i~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 421 (488)
-+++. .++-. ..+....+..+-......-|.++|+++.+... ..+-.+.+.+..++-+||+.+...
T Consensus 274 ~~l~~myqGlF---lAPhvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf~~~eKmIaFcqaiQ~a 344 (416)
T COG4100 274 YSLREMYQGLF---LAPHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKFGSKEKMIAFCQAIQAA 344 (416)
T ss_pred HHHHHHHhhhc---cchHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheecCCHHHHHHHHHHHhhc
Confidence 22222 22111 12344444444455556667778887754322 244567788888999999988754
No 390
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.35 E-value=4.4e-06 Score=79.43 Aligned_cols=279 Identities=15% Similarity=0.131 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHh---CC----CCeEEeCCcHHHH-hhhhhcc------cCCCcEEEEeCCCchHHHHHHHhcCCeEEEee
Q 040324 148 HNELEECVARFV---GK----PAAIVFGMGYVTN-SSILPVL------MGKGSLIISDSLNHNSIVNGARGSGATIRVFQ 213 (488)
Q Consensus 148 ~~~l~~~la~~~---g~----~~~i~~~sGs~a~-~~~~~~~------~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~ 213 (488)
..+|++.|-++. |- ++-|++.+|+.-. .+++-++ ..+...|+...|+|+++.............+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 367777776655 32 4789999998865 3333333 23456899999999999877544332222222
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcch
Q 040324 214 HNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCE 293 (488)
Q Consensus 214 ~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~ 293 (488)
- |...+. .+. .+ ..-+=++.+.++++|.+- +. +++.-+.-+|.|-||-.--+
T Consensus 125 G-da~~~~---~~~---------~~-~~~IElVTSPNNPDG~lr--~~---V~~g~~~k~I~D~AYYWPhy--------- 176 (363)
T PF04864_consen 125 G-DASNFK---NSD---------NP-SPYIELVTSPNNPDGQLR--EA---VLNGSSGKVIHDLAYYWPHY--------- 176 (363)
T ss_dssp E-ECCCGT---T-S----------C-CGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTT---------
T ss_pred c-cHHhhc---cCC---------CC-CCeEEEEeCCCCCccccc--ch---hcCCCCcceeeeeeeecccc---------
Confidence 1 111111 110 01 222333456666776432 11 23555667899999862222
Q ss_pred hcCCC-CCCccEEEcccccccCCcc---cEEEeC-HHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCC----
Q 040324 294 LLGVD-TSDVDIMMGTFSKSFGSYG---GYIAGS-KELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGS---- 364 (488)
Q Consensus 294 ~~~v~-p~~~di~~~t~sK~~g~~G---g~i~~~-~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~---- 364 (488)
..+. |.|-||++.|+||.=|-+| ||.+.+ +++.+.+.....-.+.+ .+--.+.-++..|+.+.+....
T Consensus 177 -TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiG--vS~dsQLRa~kiLk~v~~~~~~~~~~ 253 (363)
T PF04864_consen 177 -TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIG--VSRDSQLRALKILKVVLDGYGTEKGT 253 (363)
T ss_dssp -S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS----HHHHHHHHHHHHHHHHHCCHHTTT
T ss_pred -cccCCCCCCceEEEEEecccCccccccceeeecCHHHHHHHHHHHHHhccc--CcHHHHHHHHHHHHHHHhcccCCCCc
Confidence 1221 4556999999999988777 887665 56666555433322233 4444445555666665432111
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHhCCC-eec-------------CCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeec
Q 040324 365 -CRGAQKLARIRENSNFFRSKLQKMGF-EVL-------------GDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVG 429 (488)
Q Consensus 365 -~~~~~~~~~~~~~~~~l~~~L~~~g~-~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~ 429 (488)
+..+=-.+.++++-+.|++.+..-+. .+. .++...+.|+.+..++ ..+-...|++.||+.+...
T Consensus 254 ~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee-d~DC~~~l~~~~I~tr~G~ 332 (363)
T PF04864_consen 254 EDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE-DEDCYAVLREAKIITRSGV 332 (363)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG-GSSHHHHHHCTTEEEEEGG
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc-cccHHHHHHhCCcccCCCC
Confidence 12222344556677777777765421 111 1112245677665443 2233444667799988621
Q ss_pred CCCccCCCCeEEEeecCCCCHHHHHHHHHHHHH
Q 040324 430 FPATPLLLARARICISASHTKEDLIEALEVISR 462 (488)
Q Consensus 430 ~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~ 462 (488)
.++ .+..++|+|+ ..++++.|.++++|..
T Consensus 333 -~fg-a~~ryVRlSm--l~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 333 -LFG-ADSRYVRLSM--LKRDDDFDQLLERLSK 361 (363)
T ss_dssp -GGT-S-TTEEEEES--SS-HHHHHHHHHHHHC
T ss_pred -ccC-CCCCeEEEec--cCCHHHHHHHHHHHHh
Confidence 222 2357999977 8999999999999875
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.99 E-value=0.0015 Score=66.82 Aligned_cols=278 Identities=13% Similarity=0.167 Sum_probs=156.2
Q ss_pred HHHHHHHHHHhCCC--CeEEeCCcHHHHhhhhhc-ccCCCcEEEEeCCCchHHHHHHHhc--CCeEEEeeCCCHHHHHHH
Q 040324 149 NELEECVARFVGKP--AAIVFGMGYVTNSSILPV-LMGKGSLIISDSLNHNSIVNGARGS--GATIRVFQHNTPSHLEEV 223 (488)
Q Consensus 149 ~~l~~~la~~~g~~--~~i~~~sGs~a~~~~~~~-~~~~~~~Vl~~~~~h~~~~~~~~~~--g~~v~~~~~~d~~~Le~~ 223 (488)
..+...++++.|.+ .+-++.-|+.|.+++..+ -..++.+++++...|+.+...++-. +..+. +...|++.....
T Consensus 166 lNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-v~~~~~~~~~~s 244 (1001)
T KOG2040|consen 166 LNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-VVVSDIKEADYS 244 (1001)
T ss_pred hhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhcccccccee-EEecCHHHhhcc
Confidence 34456677777764 566677788777543333 3456666999999999988765432 22222 122233322211
Q ss_pred HHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEE-ccccccccCCCCCCcchhcCCCCCCc
Q 040324 224 LREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLD-EAHSIGAVGKTGRGVCELLGVDTSDV 302 (488)
Q Consensus 224 l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~D-E~~s~g~~g~~g~~~~~~~~v~p~~~ 302 (488)
.+..+.+++.-. ..+|.+.+..++++++++.|.++++- +--+.-.+.+.| .|| .
T Consensus 245 --------------~~~v~gvlvQYP-~t~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrpPg-----efG-----a 299 (1001)
T KOG2040|consen 245 --------------SKDVSGVLVQYP-DTEGSVLDFDELVELAHANGSLVVMATDLLALTILRPPG-----EFG-----A 299 (1001)
T ss_pred --------------ccceeEEEEEcC-CCCCcccCHHHHHHHhhccCceEEEeehhhHHHccCChh-----hcC-----c
Confidence 124555665322 23588889999999999999876542 222221232222 234 3
Q ss_pred cEEEccc---ccccCCcc---cEEEeCHHHHHHHHhh----------------------CCCCcccCCCCHHHHHHHHHH
Q 040324 303 DIMMGTF---SKSFGSYG---GYIAGSKELIQYLKYN----------------------CPAHLYATSISPPAAEQIISA 354 (488)
Q Consensus 303 di~~~t~---sK~~g~~G---g~i~~~~~~~~~~~~~----------------------~~~~~~~~~~~p~~~aa~~a~ 354 (488)
||.++|- +=.+|.+| |+.+.++++...+... .|--.--.+.|--.++|.++.
T Consensus 300 DIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLAN 379 (1001)
T KOG2040|consen 300 DIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLAN 379 (1001)
T ss_pred eeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHH
Confidence 7887763 33344334 5554444433222100 000000001222222333332
Q ss_pred HHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCc
Q 040324 355 IQVVI-GEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPAT 433 (488)
Q Consensus 355 L~~i~-~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~ 433 (488)
+.-+- =.-+++..+++.+++......|..+|+..|.++.... .+-.+.+.......++..+..+++|-++-+
T Consensus 380 maAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k~--fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~----- 452 (1001)
T KOG2040|consen 380 MAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHKP--FFDTLKIRCGCSAEEVLDRAAKRQINLRLV----- 452 (1001)
T ss_pred HHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhcccc--ccceEEEEecCcHHHHHHHHHhhcCceEEe-----
Confidence 22110 0125556777888888889999999999887665332 222233333335678888888887766532
Q ss_pred cCCCCeEEEeecCCCCHHHHHHHHHHHH
Q 040324 434 PLLLARARICISASHTKEDLIEALEVIS 461 (488)
Q Consensus 434 ~~~~~~iRi~~~~~~t~edid~~l~~l~ 461 (488)
.++.+-+++--+.+++|+|.++.++.
T Consensus 453 --ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 453 --EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred --ecCceEEeecccccHHHHHHHHHHHc
Confidence 23678888888999999999999986
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.94 E-value=8.2e-05 Score=70.38 Aligned_cols=284 Identities=13% Similarity=0.137 Sum_probs=158.1
Q ss_pred HHHHHHHHHHh-CC------C-Ce--EEeCCcHHHH--hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-
Q 040324 149 NELEECVARFV-GK------P-AA--IVFGMGYVTN--SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN- 215 (488)
Q Consensus 149 ~~l~~~la~~~-g~------~-~~--i~~~sGs~a~--~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~- 215 (488)
.++.+..+++. |. + +. +-.-||+.|. .+.+.+..-++..|.++.|.|+.........|..+..+++-
T Consensus 98 ~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd 177 (427)
T KOG1411|consen 98 AEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYD 177 (427)
T ss_pred HHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecc
Confidence 56666666654 33 1 22 2223677665 33333334567889999999999888888889888777754
Q ss_pred ------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCC---ChHHHHHHHHHcCcEEEEEccccccccCC
Q 040324 216 ------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC---KLPEIITICKRYKAYTYLDEAHSIGAVGK 286 (488)
Q Consensus 216 ------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~---~l~~l~~l~~~~g~~li~DE~~s~g~~g~ 286 (488)
|.+.+-+-+.+. |....+++-....+++|.=+ ..++|.++-++.+.+-++|-+|- +|.
T Consensus 178 ~~t~gld~~g~ledl~~~----------p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQ--Gfa- 244 (427)
T KOG1411|consen 178 PKTRGLDFKGMLEDLGEA----------PEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQ--GFA- 244 (427)
T ss_pred ccccccchHHHHHHHhcC----------CCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhc--ccc-
Confidence 333333333321 33444555566667776433 58899999999999999999998 553
Q ss_pred CCCCc-----chhcCCCCCCcc-EEEcccccccCCcc------cEEEeCHHHHHHHHh----hCCCCcccCCCCHHHHHH
Q 040324 287 TGRGV-----CELLGVDTSDVD-IMMGTFSKSFGSYG------GYIAGSKELIQYLKY----NCPAHLYATSISPPAAEQ 350 (488)
Q Consensus 287 ~g~~~-----~~~~~v~p~~~d-i~~~t~sK~~g~~G------g~i~~~~~~~~~~~~----~~~~~~~~~~~~p~~~aa 350 (488)
.|... ..+|- .+... ++.-||+|-+|..| .+++.+.+....+.. ..++ .|+ .+|+--|.
T Consensus 245 SG~~d~DA~avR~F~--~~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRp-mYS--nPP~hGAr 319 (427)
T KOG1411|consen 245 SGDLDKDAQAVRLFV--EDGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRP-MYS--NPPLHGAR 319 (427)
T ss_pred cCCchhhHHHHHHHH--HcCCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcc-ccc--CCCccchh
Confidence 22211 12221 12223 44579999999755 445666655544432 2222 343 44443333
Q ss_pred HHHHHHHHhccC-CC---chHHHHHHHHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHC-CceE
Q 040324 351 IISAIQVVIGED-GS---CRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAI 425 (488)
Q Consensus 351 ~~a~L~~i~~~~-~~---~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v 425 (488)
..+. ++.+.. .. .+.....+++...++.|.+.|+..|-...-..-...+..+.+..... +-.+.|.++ .|++
T Consensus 320 Iv~~--Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p-eQv~~l~ke~~iYm 396 (427)
T KOG1411|consen 320 IVAT--ILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP-EQVDWLTKEYHIYL 396 (427)
T ss_pred hhhh--ccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH-HHHHHHHhhheeee
Confidence 2222 111100 00 12344556666677777777776543220000001112223333322 444556555 8888
Q ss_pred EeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHHH
Q 040324 426 VTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGD 465 (488)
Q Consensus 426 ~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~ 465 (488)
.. --||+++ ..+...++++.++|.++..
T Consensus 397 T~-----------dGRiS~a-G~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 397 TK-----------DGRISMA-GLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred cc-----------CceEeec-cccccCCcccchhhHhHhc
Confidence 72 2577774 5677788888888877653
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.65 E-value=0.0028 Score=58.03 Aligned_cols=303 Identities=15% Similarity=0.143 Sum_probs=147.6
Q ss_pred HHHHHHHHHHhCC---CCeEEeCCcHHHH--hh--hhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC------
Q 040324 149 NELEECVARFVGK---PAAIVFGMGYVTN--SS--ILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN------ 215 (488)
Q Consensus 149 ~~l~~~la~~~g~---~~~i~~~sGs~a~--~~--~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~------ 215 (488)
.++....-.+.|. ..++++...+... +. .++.-..+...|+-..-...+....+--.|..++.+..-
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l 139 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDEL 139 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHH
Confidence 4555555555564 4677766443322 21 222222334556655555555555666667766665421
Q ss_pred --CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcc
Q 040324 216 --TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVC 292 (488)
Q Consensus 216 --d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~ 292 (488)
|++.+++++++.. +....+|.. .+.+. .-....+++|..+|..|++.-|+..+|+.-.- .+-+...
T Consensus 140 ~tdleav~~~iee~g---------~dcilci~sttscfa-pr~pd~leaiaaica~~diphivnnayglqse-e~i~~ia 208 (432)
T KOG3843|consen 140 ITDLEAVEAIIEELG---------EDCILCIHSTTSCFA-PRSPDNLEAIAAICAAHDIPHIVNNAYGLQSE-ECIHKIA 208 (432)
T ss_pred HHhHHHHHHHHHHhC---------CceEEEEeecccccC-CCCCchHHHHHHHHHccCchhhhccccccchH-HHHHHHH
Confidence 7888888887731 222322222 12221 12333699999999999999999999862100 0000011
Q ss_pred hhcCCCCCCccEEEcccccccCC-cccEEE-e-CHHHHHHHHhhCCCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHH
Q 040324 293 ELLGVDTSDVDIMMGTFSKSFGS-YGGYIA-G-SKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQ 369 (488)
Q Consensus 293 ~~~~v~p~~~di~~~t~sK~~g~-~Gg~i~-~-~~~~~~~~~~~~~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~ 369 (488)
. +..-..+|-++-|+.|.|-. .||+++ + ++..++.+.+.-.+- .+ +.+..-... .-|. + +.....+
T Consensus 209 a--~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypgr-as-a~ps~dlli--tll~-~----gqn~f~e 277 (432)
T KOG3843|consen 209 A--AAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPGR-AS-ASPSLDLLI--TLLS-L----GQNAFKE 277 (432)
T ss_pred H--HhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCCc-cc-cCccHHHHH--HHHH-h----chhHHHH
Confidence 1 11123456677899999864 345543 3 456667666543321 11 122211111 1111 0 1111222
Q ss_pred HHHHHHHHHHHHHHHHHh----CCCeecCCCCC---CeEEEEeCCcchH---HHHHHHHHHCCc---eEEeecCCCc---
Q 040324 370 KLARIRENSNFFRSKLQK----MGFEVLGDNDS---PVMPIMVYNPAKV---SSFSRECLKQNV---AIVTVGFPAT--- 433 (488)
Q Consensus 370 ~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~l~~~Gi---~v~~~~~~~~--- 433 (488)
...+-+++--+++..+.+ .|-.+...+.. ..+.+...++.+. ..|...|..+|| .+++.+...+
T Consensus 278 ~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttie 357 (432)
T KOG3843|consen 278 LFGEQKEMFLKLRNKIIKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIE 357 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeee
Confidence 222223333333333322 23222222222 2222222333333 345556666654 4554332211
Q ss_pred ------------cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHHhCCccCC
Q 040324 434 ------------PLLLARARICISASHTKEDLIEALEVISRIGDLVGIKYFP 473 (488)
Q Consensus 434 ------------~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~~~~~~~~ 473 (488)
..-..++-...+..+++.|+|++++++++.+..+..+..+
T Consensus 358 g~ef~~f~sht~e~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke~ak 409 (432)
T KOG3843|consen 358 GCEFIGFGSHTNEQHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKELAK 409 (432)
T ss_pred ceEEeccccccCcCchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 0111244455566789999999999999988776554433
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=94.50 E-value=4.3 Score=38.23 Aligned_cols=323 Identities=15% Similarity=0.147 Sum_probs=170.4
Q ss_pred cceeEEeccccccCCCCCCccchHHHHHHHHH-cCCCC----CCcccCCCChhhHHHHHHHHHHHhCCCC---eEEeCCc
Q 040324 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSLKK-YSHST----CSSRVDGGTLALHNELEECVARFVGKPA---AIVFGMG 170 (488)
Q Consensus 99 g~~~ld~~s~~~lg~~~~~~~v~~a~~~~l~~-~~~~~----~~~~~~~g~~~~~~~l~~~la~~~g~~~---~i~~~sG 170 (488)
-.+.+||+ .|.+.-+..+...+++-+-. .+.+. .+.|.- -...+..+-+..+.+++..++ ++++-.|
T Consensus 5 ~~~vvnFa----aGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk-~f~kii~~tes~lreLlniPdn~~vlf~QGG 79 (370)
T KOG2790|consen 5 PERVVNFA----AGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSK-DFAKIINDTESLLRELLNIPDNYKVLFLQGG 79 (370)
T ss_pred ccceeecC----CCcccCCHHHHHHHHHHhhccCCCcceEEEecccch-hHHHHHHHHHHHHHHHHcCCCceeEEEEeCC
Confidence 46789987 55554444444444443333 22222 122211 134456777888888887753 4555433
Q ss_pred HHHHhhhh-hccc----C-CCcEEEEeCCCchHHHHHHHhcCCeEEEeeC--------CCHHHHHHHHHHHHhcCCCCCC
Q 040324 171 YVTNSSIL-PVLM----G-KGSLIISDSLNHNSIVNGARGSGATIRVFQH--------NTPSHLEEVLREQIAEGQPRTR 236 (488)
Q Consensus 171 s~a~~~~~-~~~~----~-~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~--------~d~~~Le~~l~~~~~~~~p~~~ 236 (488)
...-.+++ ..+. + .-|-|++-.-.--+...+-+......+..+. .|.+.|+..
T Consensus 80 Gt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~------------- 146 (370)
T KOG2790|consen 80 GTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELN------------- 146 (370)
T ss_pred CcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhcccC-------------
Confidence 33222211 1122 1 2345555443333344444443332222221 144444321
Q ss_pred CCCceEEEEE--cCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcchhcCCCCCCccEEEcccccccC
Q 040324 237 RPWKKIMVVV--EGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG 314 (488)
Q Consensus 237 ~~~~~~~vi~--e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~~~~~v~p~~~di~~~t~sK~~g 314 (488)
|+..-+..+ |.|.+.+=. +++ +-.-+|+++++|-..- -+.| -+++ .+.++++..--|..|
T Consensus 147 -~da~yvyyCaNETVHGVEf~--~~P----~~~~~~~vlVaDmSSn--flSr-------pvDv--sk~gvi~aGAQKN~G 208 (370)
T KOG2790|consen 147 -PDASYVYYCANETVHGVEFD--FIP----VNDPKGAVLVADMSSN--FLSR-------PVDV--SKFGVIFAGAQKNVG 208 (370)
T ss_pred -CCccEEEEecCceeeceecC--CCC----CCCCCCceEEEecccc--hhcC-------Cccc--hhcceEEeccccccC
Confidence 223334444 677755411 222 3345789999997654 2221 1233 333667778889999
Q ss_pred Ccc-cEEEeCHHHHHHHHhhC-----------CCCcccCCCCHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHH
Q 040324 315 SYG-GYIAGSKELIQYLKYNC-----------PAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFR 382 (488)
Q Consensus 315 ~~G-g~i~~~~~~~~~~~~~~-----------~~~~~~~~~~p~~~aa~~a~L~~i~~~~~~~~~~~~~~~~~~~~~~l~ 382 (488)
..| -.++.+++++....... ..+.|. +.+.....+.--+++.|.+.. ....+.+.-.+.++.+.
T Consensus 209 ~aG~Tvvivr~dllg~~~~~tP~v~dyk~~~~NnSlyN-TpP~f~iy~~~Lv~~~il~~G---Gl~a~e~~n~~KskllY 284 (370)
T KOG2790|consen 209 PAGVTVVIVRKDLLGNALDITPSVLDYKIMDKNNSLYN-TPPCFGIYVMGLVFEWILEKG---GLAAMEKLNQEKSKLLY 284 (370)
T ss_pred ccccEEEEEehhhhcccccCCccccceeeecccccccc-CCCeeeeeehhhHHHHHHhcc---cHHHHHHHHHHHHHHHH
Confidence 888 55556666654332211 111222 123333444555667664322 23444445577888899
Q ss_pred HHHHhC-CCeecC---CCCC-CeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHH
Q 040324 383 SKLQKM-GFEVLG---DNDS-PVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEAL 457 (488)
Q Consensus 383 ~~L~~~-g~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l 457 (488)
+.+.+. |+-... ...+ .-+++.+...+...+|..+..++++.-.. |+-.+ +.+|-++--++|-++.++++
T Consensus 285 d~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~~mv~LK-GhRSV----GGiRASlYNAisv~~~q~L~ 359 (370)
T KOG2790|consen 285 DAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKEHMVQLK-GHRSV----GGIRASLYNAISVEEVQKLA 359 (370)
T ss_pred HHHHhcCCeEEcccchhhhhhcccceeecchHHHHHHHHHHHHhhhhccc-ccccc----ccchhhhhccccHHHHHHHH
Confidence 999876 553321 1122 23456666666677888888888765442 32222 45999988889999999999
Q ss_pred HHHHHHHHH
Q 040324 458 EVISRIGDL 466 (488)
Q Consensus 458 ~~l~~~~~~ 466 (488)
+-++++.+.
T Consensus 360 ~~m~~F~k~ 368 (370)
T KOG2790|consen 360 AFMKEFQKK 368 (370)
T ss_pred HHHHHHHHh
Confidence 988887654
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=94.28 E-value=0.14 Score=44.16 Aligned_cols=48 Identities=19% Similarity=0.331 Sum_probs=36.5
Q ss_pred HHHHHHHHHHh----C--C---CCeEEeCCcHHH-HhhhhhcccCCCcEEEEeCCCch
Q 040324 149 NELEECVARFV----G--K---PAAIVFGMGYVT-NSSILPVLMGKGSLIISDSLNHN 196 (488)
Q Consensus 149 ~~l~~~la~~~----g--~---~~~i~~~sGs~a-~~~~~~~~~~~~~~Vl~~~~~h~ 196 (488)
.+|++++|+++ | . ++.|++++|+.. +..++.+++.+||.|+++.|+|+
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 56777777766 3 1 245777777665 57888999999999999999986
No 396
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=81.83 E-value=23 Score=33.22 Aligned_cols=57 Identities=19% Similarity=0.225 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc-CcCCCCCC---CCChHHHHHHHHHcCcEEEEEcccc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE-GIYSMEGE---LCKLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e-~v~s~~G~---~~~l~~l~~l~~~~g~~li~DE~~s 280 (488)
++++++.+++.....| +.-+++++ ++.+-.-. ..+|..|..+.++++..+|+|-.|+
T Consensus 134 t~~e~~~A~e~i~~~G--------n~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs 194 (250)
T PRK13397 134 TIEEYLGALSYLQDTG--------KSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHS 194 (250)
T ss_pred CHHHHHHHHHHHHHcC--------CCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCC
Confidence 5666666666544433 22366676 55333222 4568888888888999999999998
No 397
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=79.52 E-value=26 Score=34.69 Aligned_cols=56 Identities=18% Similarity=0.175 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-c------CCCCCCCCChHHHHHHHHHcCcEEEEEccccc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-I------YSMEGELCKLPEIITICKRYKAYTYLDEAHSI 281 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v------~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~ 281 (488)
+++++..+++.....| +.-+++++. + |+ -...+|..|..+.+.++..+|+|-.|+.
T Consensus 220 t~ee~~~A~e~i~~~G--------n~~viL~erG~rtf~s~y~--~~~~dl~ai~~lk~~~~lPVi~DpsH~~ 282 (352)
T PRK13396 220 TIDEWLMAAEYILAAG--------NPNVILCERGIRTFDRQYT--RNTLDLSVIPVLRSLTHLPIMIDPSHGT 282 (352)
T ss_pred CHHHHHHHHHHHHHcC--------CCeEEEEecCCccCcCCCC--CCCcCHHHHHHHHHhhCCCEEECCcccC
Confidence 7788877777655444 223555543 2 32 2345799999998888999999999984
No 398
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=74.37 E-value=40 Score=33.60 Aligned_cols=79 Identities=11% Similarity=0.185 Sum_probs=49.2
Q ss_pred CCchHHHHHHHhcCCeEEEeeC---CCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc-CcCCC--CC-CCCChHHHHHH
Q 040324 193 LNHNSIVNGARGSGATIRVFQH---NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE-GIYSM--EG-ELCKLPEIITI 265 (488)
Q Consensus 193 ~~h~~~~~~~~~~g~~v~~~~~---~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e-~v~s~--~G-~~~~l~~l~~l 265 (488)
..+......+...|.. +.++. .++++++.+++.....| +.-+++++ ++.+- .+ .-.+|..|..+
T Consensus 212 ~~n~~LL~~~a~~gkP-Vilk~G~~~t~~e~~~Ave~i~~~G--------n~~i~L~erg~s~yp~~~~~~ldl~~i~~l 282 (360)
T PRK12595 212 MQNFELLKAAGRVNKP-VLLKRGLSATIEEFIYAAEYIMSQG--------NGQIILCERGIRTYEKATRNTLDISAVPIL 282 (360)
T ss_pred ccCHHHHHHHHccCCc-EEEeCCCCCCHHHHHHHHHHHHHCC--------CCCEEEECCccCCCCCCCCCCcCHHHHHHH
Confidence 3444444444444443 34442 37888888877655444 22366676 44331 11 12379999999
Q ss_pred HHHcCcEEEEEcccc
Q 040324 266 CKRYKAYTYLDEAHS 280 (488)
Q Consensus 266 ~~~~g~~li~DE~~s 280 (488)
.++++..+++|-.|+
T Consensus 283 k~~~~~PV~~d~~Hs 297 (360)
T PRK12595 283 KQETHLPVMVDVTHS 297 (360)
T ss_pred HHHhCCCEEEeCCCC
Confidence 999999999999998
No 399
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=71.41 E-value=54 Score=31.04 Aligned_cols=58 Identities=14% Similarity=0.156 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcC-c--C-CCCCCCCChHHHHHHHHHcCcEEEEEccccc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEG-I--Y-SMEGELCKLPEIITICKRYKAYTYLDEAHSI 281 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~-v--~-s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~ 281 (488)
++++++.+++.....| +.-+++++. + | +..-...+|..|..+.++++..+++|--|+.
T Consensus 144 t~~e~~~Ave~i~~~G--------n~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~ 205 (260)
T TIGR01361 144 TIEEWLYAAEYILSSG--------NGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAA 205 (260)
T ss_pred CHHHHHHHHHHHHHcC--------CCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCC
Confidence 5777777766644433 222444542 3 3 2222345799999999999999999999983
No 400
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=60.17 E-value=68 Score=29.35 Aligned_cols=95 Identities=18% Similarity=0.186 Sum_probs=63.2
Q ss_pred eEEeCCcHHHHhhhhhccc-------------CCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHH
Q 040324 164 AIVFGMGYVTNSSILPVLM-------------GKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLR 225 (488)
Q Consensus 164 ~i~~~sGs~a~~~~~~~~~-------------~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~ 225 (488)
+.+++.|=..+.++..++. ..+|-.....+++......++..|..+..+... ..++|.+.|+
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l~ 83 (223)
T COG2102 4 IALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEALR 83 (223)
T ss_pred EEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHHH
Confidence 4566777666654443332 223445555566666666677778877766543 4777888777
Q ss_pred HHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 226 EQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 226 ~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
.. +.-.|+.+.|+|.. ....+..+|++.|+-++
T Consensus 84 ~l------------~~d~iv~GaI~s~y----qk~rve~lc~~lGl~~~ 116 (223)
T COG2102 84 RL------------KVDGIVAGAIASEY----QKERVERLCEELGLKVY 116 (223)
T ss_pred hC------------cccEEEEchhhhHH----HHHHHHHHHHHhCCEEe
Confidence 63 34478889999887 78999999999987643
No 401
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=56.24 E-value=40 Score=33.98 Aligned_cols=43 Identities=23% Similarity=0.390 Sum_probs=27.0
Q ss_pred CCceEEEEE-cCcCCCCCCCCChHHHHHHHHHcC--cEEEEEccccccccC
Q 040324 238 PWKKIMVVV-EGIYSMEGELCKLPEIITICKRYK--AYTYLDEAHSIGAVG 285 (488)
Q Consensus 238 ~~~~~~vi~-e~v~s~~G~~~~l~~l~~l~~~~g--~~li~DE~~s~g~~g 285 (488)
|..+.+.|+ |..-+. .++.+..-..+++ .++++||+|+..-+|
T Consensus 112 p~~K~LYITPE~AAt~-----~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQWG 157 (641)
T KOG0352|consen 112 PTIKMLYITPEGAATD-----GFQKLLNGLANRDVLRYIVVDEAHCVSQWG 157 (641)
T ss_pred CceeEEEEchhhhhhh-----hHHHHHHHHhhhceeeeEEechhhhHhhhc
Confidence 557777776 222221 3555555555555 469999999966666
No 402
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=51.92 E-value=1.3e+02 Score=26.34 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=56.0
Q ss_pred HHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCc-hHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhc
Q 040324 152 EECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNH-NSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAE 230 (488)
Q Consensus 152 ~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h-~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~ 230 (488)
.+.|.+.++.+-+-+-.||++-..++..+....+.+.++..++. ........+.|.++..++.++.++++..+.+...+
T Consensus 45 a~~lr~~~~iPVV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~~~~~ 124 (176)
T PF06506_consen 45 AELLRKHVSIPVVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYDSEEEIEAAIKQAKAE 124 (176)
T ss_dssp HHHHHCC-SS-EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEESSHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEECCHHHHHHHHHHHHHc
Confidence 34444444444344444555544444443333333433333333 33455566678999999999999999999987654
Q ss_pred CCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcc
Q 040324 231 GQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 231 ~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~ 278 (488)
| . =+++++. -..++|+++|+.-+.-+.
T Consensus 125 G---------~-~viVGg~-----------~~~~~A~~~gl~~v~i~s 151 (176)
T PF06506_consen 125 G---------V-DVIVGGG-----------VVCRLARKLGLPGVLIES 151 (176)
T ss_dssp T------------EEEESH-----------HHHHHHHHTTSEEEESS-
T ss_pred C---------C-cEEECCH-----------HHHHHHHHcCCcEEEEEe
Confidence 3 2 2334332 246888999887665433
No 403
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=49.12 E-value=17 Score=38.90 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=32.9
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCCcc
Q 040324 251 SMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVC 292 (488)
Q Consensus 251 s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~~~ 292 (488)
+.=|....++++++-|+++||-+|+|=|+. -|++.+.+..
T Consensus 208 sryGtPedfk~fVD~aH~~GIgViLD~V~~--HF~~d~~~L~ 247 (628)
T COG0296 208 SRYGTPEDFKALVDAAHQAGIGVILDWVPN--HFPPDGNYLA 247 (628)
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEecCC--cCCCCcchhh
Confidence 333666679999999999999999999999 8888766543
No 404
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=48.87 E-value=2e+02 Score=28.39 Aligned_cols=57 Identities=21% Similarity=0.245 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEc-Cc--C-CCCCCCCChHHHHHHHHHcCcEEEEEcccc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVE-GI--Y-SMEGELCKLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e-~v--~-s~~G~~~~l~~l~~l~~~~g~~li~DE~~s 280 (488)
+++++..+.+.....| +.-+++++ ++ | +..-...++..+..+.+..+..+|+|-.|+
T Consensus 212 ti~E~l~A~e~i~~~G--------N~~viL~erG~~tf~~~~~~~ldl~ai~~lk~~~~lPVi~d~sH~ 272 (335)
T PRK08673 212 TIEEWLMAAEYILAEG--------NPNVILCERGIRTFETATRNTLDLSAVPVIKKLTHLPVIVDPSHA 272 (335)
T ss_pred CHHHHHHHHHHHHHcC--------CCeEEEEECCCCCCCCcChhhhhHHHHHHHHHhcCCCEEEeCCCC
Confidence 6777777766644444 22245554 23 3 112223468899999888899999999998
No 405
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.59 E-value=1.5e+02 Score=28.09 Aligned_cols=24 Identities=17% Similarity=0.196 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHcCcEEEEEccccc
Q 040324 258 KLPEIITICKRYKAYTYLDEAHSI 281 (488)
Q Consensus 258 ~l~~l~~l~~~~g~~li~DE~~s~ 281 (488)
++..+..+.++++..+++|-.|+.
T Consensus 184 dl~~i~~lk~~~~~pV~~D~sHs~ 207 (266)
T PRK13398 184 DLAAVAVIKELSHLPIIVDPSHAT 207 (266)
T ss_pred HHHHHHHHHhccCCCEEEeCCCcc
Confidence 578888888888999999999984
No 406
>PF06877 RraB: Regulator of ribonuclease activity B; InterPro: IPR009671 This entry occurs in several hypothetical bacterial proteins of around 120 residues in length. The function of these proteins is unknown. The protein structure has been determined for one member of this group, the hypothetical protein VCO424 from Vibrio cholerae; it has an alpha+beta sandwich fold.; PDB: 1NXI_A.
Probab=44.02 E-value=1.2e+02 Score=23.79 Aligned_cols=89 Identities=11% Similarity=0.009 Sum_probs=49.4
Q ss_pred HHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCceEEeecCCCccCCCC--eEEEeecCCCCHHHHHHHHH
Q 040324 381 FRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLA--RARICISASHTKEDLIEALE 458 (488)
Q Consensus 381 l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~--~iRi~~~~~~t~edid~~l~ 458 (488)
+.+.|.+.|.....+ ..--+++.+.+..++..|+..+.+.|.-+..... ....+.. .+.++..-.++.+.|.....
T Consensus 9 vl~~L~~~Gddl~~~-r~ieh~~~f~~~~~~~~f~~~~~~~g~~v~~~~~-~~~d~~~~~~~~~~~~~~~~~~~I~~~~~ 86 (104)
T PF06877_consen 9 VLEALEEDGDDLSKP-RPIEHWFYFEDEEDAEKFAEELEKLGYEVESAEE-DEEDGDGPYCLDISREMVLDYEDINAITQ 86 (104)
T ss_dssp HHHHHHHHT--TTS--EEEEEEEEES-HHHHHHHHHHHHHHS---B-----B-SS-SSBEEEEEEEEE-S-HHHHHHHHH
T ss_pred HHHHHHhcCCCCCCC-eEEEEEEEeCCHHHHHHHHHHHHHCCCEEEEeec-ccCCCCceEEEEEEEecCCCHHHHHHHHH
Confidence 344455556543222 1112345567778888999999999988764221 0112222 46666666788999999999
Q ss_pred HHHHHHHHhCCcc
Q 040324 459 VISRIGDLVGIKY 471 (488)
Q Consensus 459 ~l~~~~~~~~~~~ 471 (488)
.|.+..++++-.|
T Consensus 87 ~l~~lA~~~~g~Y 99 (104)
T PF06877_consen 87 ELEDLAKEFGGEY 99 (104)
T ss_dssp HHHHHHHHHT-EE
T ss_pred HHHHHHHHhCcEe
Confidence 9999998887554
No 407
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=40.67 E-value=38 Score=27.27 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=36.0
Q ss_pred CcchHHHHHHHHHHCCceEEeecCCCc--cCCCCeEEEeecCCCCHHHHHHHHHHHHHHHHH
Q 040324 407 NPAKVSSFSRECLKQNVAIVTVGFPAT--PLLLARARICISASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 407 ~~~~~~~~~~~l~~~Gi~v~~~~~~~~--~~~~~~iRi~~~~~~t~edid~~l~~l~~~~~~ 466 (488)
...++..+.+.|.++|+.+......++ ..+...+-+ ...++++|++++.|++..++
T Consensus 9 qd~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlli----Gvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 9 QDEDADDLSDALNENGFRVTKLSSTGGFLREGNTTLLI----GVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEE----EEEGGGHHHHHHHHHHHH--
T ss_pred cHhhHHHHHHHHHHCCceEEEEecccceeccCCEEEEE----EecHHHHHHHHHHHHHhhcC
Confidence 456778899999999999876332211 122223434 35899999999999997754
No 408
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=40.58 E-value=1.1e+02 Score=25.77 Aligned_cols=53 Identities=19% Similarity=0.208 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCCh----HHH-HHHHHHc-CcEE-EEEcccc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKL----PEI-ITICKRY-KAYT-YLDEAHS 280 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l----~~l-~~l~~~~-g~~l-i~DE~~s 280 (488)
+.+.|.+++++. ....|+++-..++.|...+. .+. .++.+++ ++.+ .+||-+|
T Consensus 39 ~~~~l~~li~~~------------~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY------------QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC------------CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh------------CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 788888888873 55678888888888877752 222 2344555 7754 6999987
No 409
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=40.37 E-value=3e+02 Score=25.32 Aligned_cols=42 Identities=21% Similarity=0.415 Sum_probs=27.5
Q ss_pred ceEEEEEcCcCCC--CCCCCChHHHHHHHHHcCcEEEEEccccccccC
Q 040324 240 KKIMVVVEGIYSM--EGELCKLPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 240 ~~~~vi~e~v~s~--~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
+-.+|+++..++. .|...--.++.++++++|+-. +++.|+++
T Consensus 84 ~Dliil~Gd~Q~~~~~gqyel~~~~Ld~a~e~g~~~----IyTLGGy~ 127 (258)
T COG2047 84 RDLIILVGDTQATSSEGQYELTGKILDIAKEFGARM----IYTLGGYG 127 (258)
T ss_pred CcEEEEeccccccCcchhHHHHHHHHHHHHHcCCcE----EEEecCcc
Confidence 3456666655543 354444678899999998764 46777775
No 410
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=38.85 E-value=41 Score=30.20 Aligned_cols=35 Identities=23% Similarity=0.267 Sum_probs=28.8
Q ss_pred ceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 040324 240 KKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYL 275 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~ 275 (488)
..+.||+|-+. .+|.....+++.+++++||+.+|.
T Consensus 156 ~Pa~VicEi~~-~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMN-DDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeC-CCccccChHHHHHHHHHcCCcEEE
Confidence 45778877554 489999999999999999998763
No 411
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=38.04 E-value=2e+02 Score=27.83 Aligned_cols=121 Identities=14% Similarity=0.123 Sum_probs=63.1
Q ss_pred EEeCCcHHHH-hhhhhcccC--C-CcEEEEeCCCchHHHHHHHhc-C-CeEEEee--CCCHHHHHHHHHHHHhcCCCCCC
Q 040324 165 IVFGMGYVTN-SSILPVLMG--K-GSLIISDSLNHNSIVNGARGS-G-ATIRVFQ--HNTPSHLEEVLREQIAEGQPRTR 236 (488)
Q Consensus 165 i~~~sGs~a~-~~~~~~~~~--~-~~~Vl~~~~~h~~~~~~~~~~-g-~~v~~~~--~~d~~~Le~~l~~~~~~~~p~~~ 236 (488)
+++|.|+.=+ +..++-+.+ + ..++.++...|.+....++.. + .....++ ..|.+.+.+++.+.
T Consensus 3 iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~--------- 73 (340)
T COG1088 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY--------- 73 (340)
T ss_pred EEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc---------
Confidence 5566665543 444444432 2 236888999998877664432 2 2333333 34778888888763
Q ss_pred CCCceEEEEE---c-----CcCCCCCCC----CChHHHHHHHHHcCc-----EEEEEccccccccCCCCCCcchhcCCCC
Q 040324 237 RPWKKIMVVV---E-----GIYSMEGEL----CKLPEIITICKRYKA-----YTYLDEAHSIGAVGKTGRGVCELLGVDT 299 (488)
Q Consensus 237 ~~~~~~~vi~---e-----~v~s~~G~~----~~l~~l~~l~~~~g~-----~li~DE~~s~g~~g~~g~~~~~~~~v~p 299 (488)
..-+|+. | ++.++.--+ .----|.+.+++|.. .+=.||||+ .++.+.....|.....|
T Consensus 74 ---~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG--~l~~~~~~FtE~tp~~P 148 (340)
T COG1088 74 ---QPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYG--DLGLDDDAFTETTPYNP 148 (340)
T ss_pred ---CCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccc--cccCCCCCcccCCCCCC
Confidence 1112332 2 222222100 013467778888873 234799998 55544333334444444
No 412
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=37.02 E-value=74 Score=31.94 Aligned_cols=51 Identities=16% Similarity=0.331 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~ 278 (488)
+.+.|-+.+++.+.+ -.++|+.+ | .-|.+.+.+.++++|++.|+++++|-=
T Consensus 129 ~~~~ll~~~~~~l~~---------~~~vVLSD--Y-~KG~L~~~q~~I~~ar~~~~pVLvDPK 179 (467)
T COG2870 129 DENKLLEKIKNALKS---------FDALVLSD--Y-AKGVLTNVQKMIDLAREAGIPVLVDPK 179 (467)
T ss_pred hHHHHHHHHHHHhhc---------CCEEEEec--c-ccccchhHHHHHHHHHHcCCcEEECCC
Confidence 344555555554432 45666664 2 236666899999999999999999944
No 413
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=36.61 E-value=1.6e+02 Score=26.78 Aligned_cols=75 Identities=15% Similarity=0.088 Sum_probs=43.6
Q ss_pred cEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHH
Q 040324 186 SLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITI 265 (488)
Q Consensus 186 ~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l 265 (488)
.+.+............++..|+.++..+.+|.+.|.++++. ..+++++-+... .........+++.
T Consensus 24 ~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g-------------~d~v~~~~~~~~-~~~~~~~~~li~A 89 (233)
T PF05368_consen 24 SVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKG-------------VDAVFSVTPPSH-PSELEQQKNLIDA 89 (233)
T ss_dssp CEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTT-------------CSEEEEESSCSC-CCHHHHHHHHHHH
T ss_pred CcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcC-------------CceEEeecCcch-hhhhhhhhhHHHh
Confidence 33333443333344445667899988888899999998875 233444433332 2122236788999
Q ss_pred HHHcCcEEE
Q 040324 266 CKRYKAYTY 274 (488)
Q Consensus 266 ~~~~g~~li 274 (488)
|++.|+-.+
T Consensus 90 a~~agVk~~ 98 (233)
T PF05368_consen 90 AKAAGVKHF 98 (233)
T ss_dssp HHHHT-SEE
T ss_pred hhccccceE
Confidence 999886544
No 414
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=36.10 E-value=3.4e+02 Score=24.73 Aligned_cols=109 Identities=10% Similarity=0.038 Sum_probs=52.7
Q ss_pred HHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHHHH
Q 040324 153 ECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQ 227 (488)
Q Consensus 153 ~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~~~ 227 (488)
+.+.+-+|.+..-+.+.-..-....+..+ +.++|.+..+.-.-...++.. +..+..-|+. ++++..+.+...
T Consensus 52 ~~l~~~yg~~gv~i~~~np~~l~~~V~k~--~~~vv~V~GGd~~vNR~AvE~-~VDVL~~P~~~Rkd~g~dHVLAKlAa~ 128 (216)
T PRK03892 52 KELKKEYGKVAILLVTPKPSLIREVKQRF--LNYLIYVQGGDLRVNRYAIER-GVDAIISPWVGRKDPGIDHVLARMAAK 128 (216)
T ss_pred HHHHHhcCcceEEEecCCHHHHHHHHHhc--cceEEEEECCcHHHHHHHHhc-ccceeecccccCcCCCccHHHHHHHHH
Confidence 34444445443333333333233333333 455555555444444444333 4444333322 355554444431
Q ss_pred HhcCCCCCCCCCceEEEEE-cCcCCCCC-C----CCChHHHHHHHHHcCcEEEE
Q 040324 228 IAEGQPRTRRPWKKIMVVV-EGIYSMEG-E----LCKLPEIITICKRYKAYTYL 275 (488)
Q Consensus 228 ~~~~~p~~~~~~~~~~vi~-e~v~s~~G-~----~~~l~~l~~l~~~~g~~li~ 275 (488)
+.+++=+. .++.-..| . +..++++.+|+++|++++++
T Consensus 129 -----------n~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VI 171 (216)
T PRK03892 129 -----------RGVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFI 171 (216)
T ss_pred -----------cCeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 23443332 44443333 2 33588999999999998765
No 415
>TIGR00162 conserved hypothetical protein TIGR00162. This ortholog set includes MJ1210 from Methanococcus jannaschii and AF0525 from Archaeoglobus fulgidus, but not MJ0106 or AF1251.
Probab=35.39 E-value=2.6e+02 Score=24.99 Aligned_cols=42 Identities=26% Similarity=0.455 Sum_probs=25.9
Q ss_pred ceEEEEEcCcCC--CCCCCCChHHHHHHHHHcCcEEEEEccccccccC
Q 040324 240 KKIMVVVEGIYS--MEGELCKLPEIITICKRYKAYTYLDEAHSIGAVG 285 (488)
Q Consensus 240 ~~~~vi~e~v~s--~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g 285 (488)
...+++.+..++ +++....-.++.++++++|+ +.+.++|++.
T Consensus 15 ~~illl~g~e~~~~p~~~~e~a~~vld~a~~~gv----~~iitLgG~~ 58 (188)
T TIGR00162 15 TDLIILVGNTQSLSPEGQYELVNAIIDVAKKYGA----RMIYTLGGYG 58 (188)
T ss_pred CCEEEEEcCCCCCChhhHHHHHHHHHHHHHHcCC----CEEEEecCCc
Confidence 345666665533 34444457899999999997 3444555543
No 416
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=35.24 E-value=4.2e+02 Score=25.61 Aligned_cols=109 Identities=10% Similarity=0.045 Sum_probs=58.6
Q ss_pred HHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCC--CcEEEEeC--CCchHHHHHHH--hcCCeEEEeeCCCHHHHHHHHH
Q 040324 152 EECVARFVGKPAAIVFGMGYVTNSSILPVLMGK--GSLIISDS--LNHNSIVNGAR--GSGATIRVFQHNTPSHLEEVLR 225 (488)
Q Consensus 152 ~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~--~~~Vl~~~--~~h~~~~~~~~--~~g~~v~~~~~~d~~~Le~~l~ 225 (488)
+..--+.+...+++++-+.+.++...+.....+ .-.|++.+ |+.-....+.. ..|.+...++ |.. +-+++.
T Consensus 153 a~Qa~ehihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~--daa-VfA~Ms 229 (353)
T KOG1465|consen 153 AVQAIEHIHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP--DAA-VFAMMS 229 (353)
T ss_pred HHHHHHHhccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec--cHH-HHHHhh
Confidence 333334555556666666666776666665544 22344433 22222233333 3456555554 332 223333
Q ss_pred HHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC--hHHHHHHHHHcCcEEEE
Q 040324 226 EQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK--LPEIITICKRYKAYTYL 275 (488)
Q Consensus 226 ~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~--l~~l~~l~~~~g~~li~ 275 (488)
+. +++++-+-.++..+|...+ ...++..+++|-.++|+
T Consensus 230 rV------------nKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~V 269 (353)
T KOG1465|consen 230 RV------------NKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIV 269 (353)
T ss_pred hc------------ceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEE
Confidence 31 4555556677777776555 66777778888887765
No 417
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=34.25 E-value=3.3e+02 Score=27.44 Aligned_cols=143 Identities=13% Similarity=0.153 Sum_probs=78.2
Q ss_pred CCCccchHHHHHHHHHcCCCCC----CcccCCCChhhHHHHHHHHHHHhCC-CCeEEeCCcHHHH-hh-hhhcccCCCcE
Q 040324 115 AADEYCTPRVIDSLKKYSHSTC----SSRVDGGTLALHNELEECVARFVGK-PAAIVFGMGYVTN-SS-ILPVLMGKGSL 187 (488)
Q Consensus 115 ~~~~~v~~a~~~~l~~~~~~~~----~~~~~~g~~~~~~~l~~~la~~~g~-~~~i~~~sGs~a~-~~-~~~~~~~~~~~ 187 (488)
|..|...+.+.+.++++..... ......| ....-+|..++.++.. ++++++.+|.=.. .. ++.. .+..-.
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~g--sGt~amEAav~sl~~pgdkVLv~~nG~FG~R~~~ia~~-~g~~v~ 107 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSG--SGTLAMEAAVASLVEPGDKVLVVVNGKFGERFAEIAER-YGAEVV 107 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcC--CcHHHHHHHHHhccCCCCeEEEEeCChHHHHHHHHHHH-hCCceE
Confidence 4456766666666655321111 1111111 1225788899999875 5788888885433 22 2222 222222
Q ss_pred EEEeCCCchH----HHHHHH-hcCCeEEEeeCC--------CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCC
Q 040324 188 IISDSLNHNS----IVNGAR-GSGATIRVFQHN--------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254 (488)
Q Consensus 188 Vl~~~~~h~~----~~~~~~-~~g~~v~~~~~~--------d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G 254 (488)
++-.+...+- +...+. -...+.+.+.|+ +++.+.++++++ -+++|++.|-|.+|
T Consensus 108 ~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~-------------g~l~iVDaVsS~Gg 174 (383)
T COG0075 108 VLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH-------------GALLIVDAVSSLGG 174 (383)
T ss_pred EEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHc-------------CCEEEEEecccCCC
Confidence 2222222211 222233 123556666665 678887777763 46889999999998
Q ss_pred CCCChHHHHHHHHHcCcEEEEEcccc
Q 040324 255 ELCKLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 255 ~~~~l~~l~~l~~~~g~~li~DE~~s 280 (488)
...++. +.|+=+++=..|-
T Consensus 175 ~~~~vd-------~wgiDv~itgSQK 193 (383)
T COG0075 175 EPLKVD-------EWGIDVAITGSQK 193 (383)
T ss_pred cccchh-------hcCccEEEecCch
Confidence 766554 4466666666664
No 418
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=33.49 E-value=28 Score=33.58 Aligned_cols=27 Identities=19% Similarity=0.544 Sum_probs=22.2
Q ss_pred ChHHHHHHH-HHcCcEEEEEcccccccc
Q 040324 258 KLPEIITIC-KRYKAYTYLDEAHSIGAV 284 (488)
Q Consensus 258 ~l~~l~~l~-~~~g~~li~DE~~s~g~~ 284 (488)
.|++|+++| +.++.++|+||+|.....
T Consensus 160 Rl~ql~~W~g~dfdgvivfDEcH~akn~ 187 (303)
T PF13872_consen 160 RLDQLVDWCGEDFDGVIVFDECHKAKNL 187 (303)
T ss_pred hHHHHHHHHhcCCCceEEeccchhcCCC
Confidence 699999999 457889999999975444
No 419
>smart00642 Aamy Alpha-amylase domain.
Probab=33.21 E-value=31 Score=30.16 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=23.2
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEcccc
Q 040324 254 GELCKLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 254 G~~~~l~~l~~l~~~~g~~li~DE~~s 280 (488)
|+...++++++.|+++|+-+|+|-|..
T Consensus 67 Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 67 GTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 444469999999999999999999975
No 420
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.25 E-value=2.2e+02 Score=22.07 Aligned_cols=65 Identities=11% Similarity=0.133 Sum_probs=38.6
Q ss_pred chHHHHHHHhcCCeEEEe--eCC---CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHc
Q 040324 195 HNSIVNGARGSGATIRVF--QHN---TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRY 269 (488)
Q Consensus 195 h~~~~~~~~~~g~~v~~~--~~~---d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~ 269 (488)
-..+...+...|.+.... +.. ....+++.+.+. ..++++++.+ |-. -...+.+.|+++
T Consensus 12 ~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~a------------D~VIv~t~~v-sH~----~~~~vk~~akk~ 74 (97)
T PF10087_consen 12 ERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKA------------DLVIVFTDYV-SHN----AMWKVKKAAKKY 74 (97)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCC------------CEEEEEeCCc-ChH----HHHHHHHHHHHc
Confidence 344555667778887777 211 122356555441 3334444433 333 478999999999
Q ss_pred CcEEEEE
Q 040324 270 KAYTYLD 276 (488)
Q Consensus 270 g~~li~D 276 (488)
|++++.=
T Consensus 75 ~ip~~~~ 81 (97)
T PF10087_consen 75 GIPIIYS 81 (97)
T ss_pred CCcEEEE
Confidence 9988754
No 421
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=32.00 E-value=40 Score=27.94 Aligned_cols=47 Identities=17% Similarity=0.265 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE 277 (488)
+.+...+.+++.... ...++|++.+.. +-+.++++|+++++.|+.=.
T Consensus 66 ~~~~r~~~l~~l~~~--------~~P~iIvt~~~~-------~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 66 DEEERKERLEKLFSY--------NPPCIIVTRGLE-------PPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp -HHHHCCHHHHHCTT--------T-S-EEEETTT----------HHHHHHHHHCT--EEEES
T ss_pred CHHHHHHHHHHHhCC--------CCCEEEEECcCC-------CCHHHHHHHHHhCCcEEEcC
Confidence 445555555554332 245667665553 77999999999999887543
No 422
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=30.38 E-value=96 Score=33.07 Aligned_cols=114 Identities=20% Similarity=0.287 Sum_probs=56.7
Q ss_pred CCCeEEeCCcHH-HHhhhhhcccCCCcEEEEeCCCchHH---HHHHHhcCCeEEEeeCC-CHHHHHHHHHHHHhcCCCCC
Q 040324 161 KPAAIVFGMGYV-TNSSILPVLMGKGSLIISDSLNHNSI---VNGARGSGATIRVFQHN-TPSHLEEVLREQIAEGQPRT 235 (488)
Q Consensus 161 ~~~~i~~~sGs~-a~~~~~~~~~~~~~~Vl~~~~~h~~~---~~~~~~~g~~v~~~~~~-d~~~Le~~l~~~~~~~~p~~ 235 (488)
.+..++..+|.. ..-.-++++..+|-.+++...= .-. ...++..|.....+... +.++-...+... ..|
T Consensus 33 ~d~lvvmPTGgGKSlCyQiPAll~~G~TLVVSPLi-SLM~DQV~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l-~~g---- 106 (590)
T COG0514 33 KDTLVVMPTGGGKSLCYQIPALLLEGLTLVVSPLI-SLMKDQVDQLEAAGIRAAYLNSTLSREERQQVLNQL-KSG---- 106 (590)
T ss_pred CcEEEEccCCCCcchHhhhHHHhcCCCEEEECchH-HHHHHHHHHHHHcCceeehhhcccCHHHHHHHHHHH-hcC----
Confidence 334445555544 3455677777778666665431 111 12244445444333322 455555555442 221
Q ss_pred CCCCceEEEEE-cCcCCCCCCCCChHHHHHHHHHcCcEEEEEccccccccCCCCCC
Q 040324 236 RRPWKKIMVVV-EGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRG 290 (488)
Q Consensus 236 ~~~~~~~~vi~-e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g~~ 290 (488)
.-+.+.+. |...++ .+.+..+ +-.-.++++||||++.-+|..-|.
T Consensus 107 ---~~klLyisPErl~~~-----~f~~~L~--~~~i~l~vIDEAHCiSqWGhdFRP 152 (590)
T COG0514 107 ---QLKLLYISPERLMSP-----RFLELLK--RLPISLVAIDEAHCISQWGHDFRP 152 (590)
T ss_pred ---ceeEEEECchhhcCh-----HHHHHHH--hCCCceEEechHHHHhhcCCccCH
Confidence 23444443 333332 2222222 334568999999998888754443
No 423
>PRK13028 tryptophan synthase subunit beta; Provisional
Probab=30.17 E-value=5.9e+02 Score=25.87 Aligned_cols=59 Identities=20% Similarity=0.184 Sum_probs=37.0
Q ss_pred HHHhCCCCeEE-eCCcHHHH-hhhhhcccCCCcEEEEeCCCch---HHHHHHHhcCCeEEEeeC
Q 040324 156 ARFVGKPAAIV-FGMGYVTN-SSILPVLMGKGSLIISDSLNHN---SIVNGARGSGATIRVFQH 214 (488)
Q Consensus 156 a~~~g~~~~i~-~~sGs~a~-~~~~~~~~~~~~~Vl~~~~~h~---~~~~~~~~~g~~v~~~~~ 214 (488)
++..|....++ .++|..+. .+++-+..+-.+.|+++...-. .....++..|++++.++.
T Consensus 105 A~~~G~~~vI~etgsGnhG~A~A~aaa~~Gl~~~I~m~~~d~~~q~~nv~~mr~~GAeVi~v~~ 168 (402)
T PRK13028 105 AKRMGKKRLIAETGAGQHGVATATAAALFGLECEIYMGEVDIERQHPNVFRMKLLGAEVVPVTR 168 (402)
T ss_pred HHHcCCCeEEEecCcHHHHHHHHHHHHHcCCCEEEEECCCcchhhHHHHHHHHHcCCEEEEEcC
Confidence 44455544554 34565554 3444455677788888764333 345568899999999975
No 424
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=28.80 E-value=77 Score=23.67 Aligned_cols=44 Identities=23% Similarity=0.293 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCeEEeCCcHHHH-hhhhhcccCCCcEEEEeC
Q 040324 149 NELEECVARFVGKPAAIVFGMGYVTN-SSILPVLMGKGSLIISDS 192 (488)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sGs~a~-~~~~~~~~~~~~~Vl~~~ 192 (488)
++|++.+.+.+|.+..+-++|...-. ..++.-+.++|+.|-.++
T Consensus 21 ~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~kgKfi~~~~ 65 (77)
T TIGR03853 21 ESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKKGKFIESDG 65 (77)
T ss_pred HHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHCCCEeecCC
Confidence 78999999999988777777764433 456666677887776644
No 425
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=28.68 E-value=77 Score=23.80 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhCCCCeEEeCCcHHHH-hhhhhcccCCCcEEEEeC
Q 040324 149 NELEECVARFVGKPAAIVFGMGYVTN-SSILPVLMGKGSLIISDS 192 (488)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sGs~a~-~~~~~~~~~~~~~Vl~~~ 192 (488)
++|.+.+.+.+|.+..+.++|+..-. ..++.-+..+|+.+..++
T Consensus 23 ~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rgKfi~~~~ 67 (78)
T PF10678_consen 23 EELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERGKFIPSDD 67 (78)
T ss_pred HHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcCCEeecCC
Confidence 78999999999988878777764432 445666677777776544
No 426
>PLN03244 alpha-amylase; Provisional
Probab=27.85 E-value=66 Score=35.44 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=27.2
Q ss_pred CCCCChHHHHHHHHHcCcEEEEEccccccccCCCC
Q 040324 254 GELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTG 288 (488)
Q Consensus 254 G~~~~l~~l~~l~~~~g~~li~DE~~s~g~~g~~g 288 (488)
|+...|+.+++.|++.|+-+|+|=|++ -+++.+
T Consensus 438 GTPeDLK~LVD~aH~~GI~VILDvV~N--H~~~d~ 470 (872)
T PLN03244 438 GTPDDFKRLVDEAHGLGLLVFLDIVHS--YAAADE 470 (872)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEecCc--cCCCcc
Confidence 444469999999999999999999997 666544
No 427
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=27.58 E-value=2.1e+02 Score=25.77 Aligned_cols=25 Identities=8% Similarity=0.017 Sum_probs=19.7
Q ss_pred CCCCCCCChHHHHHHHHHcCcEEEE
Q 040324 251 SMEGELCKLPEIITICKRYKAYTYL 275 (488)
Q Consensus 251 s~~G~~~~l~~l~~l~~~~g~~li~ 275 (488)
|..|.-..+.++.+.++++|+.+|.
T Consensus 117 S~SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 117 STRGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred eCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 4445555799999999999998774
No 428
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=27.54 E-value=5.5e+02 Score=24.54 Aligned_cols=111 Identities=13% Similarity=0.069 Sum_probs=56.6
Q ss_pred HHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc--CCCcEEEEeC--CCchHHHHH--HHhcCCeEEEeeCCCHHHHHHH
Q 040324 150 ELEECVARFVGKPAAIVFGMGYVTNSSILPVLM--GKGSLIISDS--LNHNSIVNG--ARGSGATIRVFQHNTPSHLEEV 223 (488)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~--~~~~~Vl~~~--~~h~~~~~~--~~~~g~~v~~~~~~d~~~Le~~ 223 (488)
+..+.-++++...+.+++-+.+.+....++... ++.-.|++.+ |.......+ +...|..+..+..+....+
T Consensus 98 ~I~~~a~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~~~GI~vtlI~Dsa~~~~--- 174 (275)
T PRK08335 98 EIGNIGSELIDDGDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELEFLGIEFEVITDAQLGLF--- 174 (275)
T ss_pred HHHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHHHCCCCEEEEeccHHHHH---
Confidence 333444555555566665555555555554443 3444556554 443332223 3345777777665543333
Q ss_pred HHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC--hHHHHHHHHHcCcEEEE
Q 040324 224 LREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK--LPEIITICKRYKAYTYL 275 (488)
Q Consensus 224 l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~--l~~l~~l~~~~g~~li~ 275 (488)
+.+. +++++=.+.|...++.+-. --.+.-+|+.|++.+++
T Consensus 175 m~~v------------d~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 175 AKEA------------TLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred HHhC------------CEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 3221 2322223556554433332 34567778999998775
No 429
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=27.41 E-value=1.6e+02 Score=24.55 Aligned_cols=53 Identities=26% Similarity=0.251 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChH----HHH-HHHHHcCcE-EEEEcccc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLP----EII-TICKRYKAY-TYLDEAHS 280 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~----~l~-~l~~~~g~~-li~DE~~s 280 (488)
+.+.|.+.+++. ....|+++-..++.|...+.. +.. +|.+++++. ..+||-+|
T Consensus 36 ~~~~l~~~i~~~------------~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 36 DWSRIEELLKEW------------TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHc------------CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 466777777663 455788888888988877621 222 233445654 56899987
No 430
>TIGR00196 yjeF_cterm yjeF C-terminal region, hydroxyethylthiazole kinase-related. The present model may hit hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis.
Probab=27.38 E-value=2.7e+02 Score=26.27 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=23.1
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEc
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDE 277 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE 277 (488)
.++++..++.+.. .+.++++.+++++..+|+|-
T Consensus 94 davvig~Gl~~~~----~~~~l~~~~~~~~~pvVlDa 126 (272)
T TIGR00196 94 DVVVIGPGLGQDP----SFKKAVEEVLELDKPVVLDA 126 (272)
T ss_pred CEEEEcCCCCCCH----HHHHHHHHHHhcCCCEEEEh
Confidence 4455544444332 37888999999999999995
No 431
>COG0133 TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism]
Probab=27.04 E-value=4.1e+02 Score=26.09 Aligned_cols=92 Identities=16% Similarity=0.136 Sum_probs=50.3
Q ss_pred HHHHHhCCCCeEEeCC-cHHHH-hhhhhcccCCCcEEEEeCCCc---hHHHHHHHhcCCeEEEeeCCC---HHHHHHHHH
Q 040324 154 CVARFVGKPAAIVFGM-GYVTN-SSILPVLMGKGSLIISDSLNH---NSIVNGARGSGATIRVFQHNT---PSHLEEVLR 225 (488)
Q Consensus 154 ~la~~~g~~~~i~~~s-Gs~a~-~~~~~~~~~~~~~Vl~~~~~h---~~~~~~~~~~g~~v~~~~~~d---~~~Le~~l~ 225 (488)
.||+.+|+.+.|.=|. |-..+ .+++-++.+-.+.|..-...- .....-+++.|++|+++.... -++..++++
T Consensus 96 LLAkrMGK~riIAETGAGQHGVAtAta~A~fgl~C~iYMGa~Dv~RQ~~NVfRM~LlGA~V~pV~sGs~TLKDA~neAlR 175 (396)
T COG0133 96 LLAKRMGKTRIIAETGAGQHGVATATAAALFGLECVIYMGAEDVERQALNVFRMRLLGAEVVPVTSGSGTLKDAINEALR 175 (396)
T ss_pred HHHHHhCCceEEeecCCCcccHHHHHHHHHhCCceEEEecchhhhhcccchhhhhhcCceEEEeccCCchHHHHHHHHHH
Confidence 4567777765554432 22222 333444556566665532211 112344778899999987652 345556666
Q ss_pred HHHhcCCCCCCCCCceEEEEEcCcCCCC
Q 040324 226 EQIAEGQPRTRRPWKKIMVVVEGIYSME 253 (488)
Q Consensus 226 ~~~~~~~p~~~~~~~~~~vi~e~v~s~~ 253 (488)
++..+- ...-.+++++.++.
T Consensus 176 dWvtn~--------~~ThY~iGsa~GPH 195 (396)
T COG0133 176 DWVTNV--------EDTHYLIGSAAGPH 195 (396)
T ss_pred HHHhcc--------ccceEEEeeccCCC
Confidence 654431 33456777777766
No 432
>PRK04346 tryptophan synthase subunit beta; Validated
Probab=26.96 E-value=6.8e+02 Score=25.39 Aligned_cols=71 Identities=23% Similarity=0.234 Sum_probs=42.1
Q ss_pred HHHhCCCCeEE-eCCcHHHH-hhhhhcccCCCcEEEEeCCCch---HHHHHHHhcCCeEEEeeCC--CHH-HHHHHHHH
Q 040324 156 ARFVGKPAAIV-FGMGYVTN-SSILPVLMGKGSLIISDSLNHN---SIVNGARGSGATIRVFQHN--TPS-HLEEVLRE 226 (488)
Q Consensus 156 a~~~g~~~~i~-~~sGs~a~-~~~~~~~~~~~~~Vl~~~~~h~---~~~~~~~~~g~~v~~~~~~--d~~-~Le~~l~~ 226 (488)
|+..|....+. .++|..+. .+.+-+..+-.+.|+++...-. .....++..|++++.++.. +++ ...+.++.
T Consensus 101 A~~~Gk~~vIaetgaGnhG~A~A~~aa~~Gl~c~I~mp~~d~~rq~~nv~~m~~lGA~Vv~v~~g~~~l~da~~ea~~~ 179 (397)
T PRK04346 101 AKRMGKKRIIAETGAGQHGVATATAAALLGLECVIYMGAEDVERQALNVFRMKLLGAEVVPVTSGSRTLKDAVNEALRD 179 (397)
T ss_pred HHHcCCCeEEEecCcHHHHHHHHHHHHHcCCcEEEEecCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 44556555555 35566555 3444455677788888764322 2345588899999998753 343 34444443
No 433
>PRK11633 cell division protein DedD; Provisional
Probab=26.96 E-value=2.2e+02 Score=26.31 Aligned_cols=57 Identities=23% Similarity=0.326 Sum_probs=40.6
Q ss_pred eCCcchHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHH
Q 040324 405 VYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463 (488)
Q Consensus 405 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~ 463 (488)
|.+..++..+...|...|+-.... +..+.+..+.|+.+....++++++.++..|++.
T Consensus 157 f~n~~~A~~l~~kL~~~G~~Ay~~--~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 157 LKNADKVNEIVAKLRLSGYRVYTV--PSTPVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred cCCHHHHHHHHHHHHHCCCeeEEE--eeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 445667889999999998876531 111122245666666699999999999999774
No 434
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=26.73 E-value=2.7e+02 Score=22.75 Aligned_cols=47 Identities=19% Similarity=0.153 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc-CCCCCCCCChHHHHHHHHHcCcEEEE
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI-YSMEGELCKLPEIITICKRYKAYTYL 275 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v-~s~~G~~~~l~~l~~l~~~~g~~li~ 275 (488)
+.+.+.+.+++.... ..+++++... +-.. + -+++++.|++++++||.
T Consensus 57 ~~~~~~~~i~~L~~~---------~~agL~i~~~~~~~~--i--P~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEK---------GAAGLGIKTGRYLDE--I--PEEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHC---------CCeEEEEeccCcccc--C--CHHHHHHHHHcCCCEEE
Confidence 556677777765433 3444544322 2221 2 28999999999998773
No 435
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=26.51 E-value=5.4e+02 Score=24.11 Aligned_cols=123 Identities=17% Similarity=0.217 Sum_probs=65.4
Q ss_pred HHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCc-EEEEeCCCchHHHHHHHhcCCeEEE----eeCC-----CHH
Q 040324 149 NELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGS-LIISDSLNHNSIVNGARGSGATIRV----FQHN-----TPS 218 (488)
Q Consensus 149 ~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~-~Vl~~~~~h~~~~~~~~~~g~~v~~----~~~~-----d~~ 218 (488)
.+.++..|+++...+.+++.+|+. +..++..+.+..+ .|++.+..+...... ..+..+.. +..+ ...
T Consensus 79 ~~IA~~Aa~lI~~g~~ifld~GTT-~~~la~~L~~~~~ltviTNsl~ia~~l~~--~~~~~vi~~GG~~~~~~~~~~G~~ 155 (253)
T COG1349 79 RAIAKAAATLIEDGDTIFLDAGTT-TLALARALPDDNNLTVITNSLNIAAALLE--KPNIEVILLGGTVRKKSGSFVGPL 155 (253)
T ss_pred HHHHHHHHhhCCCCCEEEECCCcH-HHHHHHHhCcCCCeEEEeCCHHHHHHHHh--CCCCeEEEeCcEEEcCCCeEEcHH
Confidence 577788888888789999999965 4556666665553 455544433332221 11222211 1111 122
Q ss_pred HHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHH-----HHcCcEEEEEccccccccCCCCC
Q 040324 219 HLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITIC-----KRYKAYTYLDEAHSIGAVGKTGR 289 (488)
Q Consensus 219 ~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~-----~~~g~~li~DE~~s~g~~g~~g~ 289 (488)
-.+.++... -.++++=+.++....|...+-..-.++. .....++++| |+ -||+.+.
T Consensus 156 -a~~~l~~~~----------~d~aFig~~gi~~~~g~~~~~~~ea~~k~~~~~~a~~~~ll~D--~s--Kf~~~~~ 216 (253)
T COG1349 156 -AEEFLRQFN----------FDKAFIGADGIDLEGGLTTFNEEEAEVKRAMIEAAREVILLAD--SS--KFGRVAP 216 (253)
T ss_pred -HHHHHHhCc----------ccEEEEeccccCCCCCcCcCCHHHHHHHHHHHHhhCcEEEEEc--CC--ccCCcee
Confidence 223343321 1455665677776666655422222211 1235789999 66 7776543
No 436
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=25.60 E-value=98 Score=28.57 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=27.6
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
.+.+++|- .+.+|....++++.+++++||+.+|
T Consensus 173 P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~ii 205 (230)
T PRK00014 173 PAGVLCEL-MNADGTMMRGASLERYAAKEGLVAL 205 (230)
T ss_pred ceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcEE
Confidence 46777765 5567999999999999999999876
No 437
>COG3962 Acetolactate synthase [Amino acid transport and metabolism]
Probab=25.54 E-value=1.8e+02 Score=29.91 Aligned_cols=64 Identities=17% Similarity=0.172 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEE-cCcCCCCCCCCChHHHHHHHHHcCcEEEEEcc----------cccccc
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVV-EGIYSMEGELCKLPEIITICKRYKAYTYLDEA----------HSIGAV 284 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~-e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~----------~s~g~~ 284 (488)
|...|+.++.-.... ++-+||+ +++.-.+ --++|+++++.+|++++.-.+ ..+|+.
T Consensus 215 d~~eL~~A~~lik~a---------k~PlIvaGGGv~YS~----A~~~L~af~E~~~iPv~ETQaGKsal~~dhplNlG~v 281 (617)
T COG3962 215 DERELADAAALIKSA---------KKPLIVAGGGVLYSG----AREALRAFAETHGIPVVETQAGKSALAWDHPLNLGGV 281 (617)
T ss_pred CHHHHHHHHHHHHhc---------CCCEEEecCceeech----HHHHHHHHHHhcCCceEeccCCcccccccCccccccc
Confidence 666666655432111 2335555 5555444 578999999999999986544 345677
Q ss_pred CCCCCCcc
Q 040324 285 GKTGRGVC 292 (488)
Q Consensus 285 g~~g~~~~ 292 (488)
|-||..+.
T Consensus 282 GvTGt~AA 289 (617)
T COG3962 282 GVTGTLAA 289 (617)
T ss_pred cccchHHH
Confidence 77776543
No 438
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=25.24 E-value=1e+02 Score=27.80 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=28.1
Q ss_pred ceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 240 KKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
..+.+++|-+ +.+|.....+++.+++++|++.+|
T Consensus 157 ~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 157 KPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 3467777764 458999999999999999999886
No 439
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=24.44 E-value=1e+02 Score=27.76 Aligned_cols=35 Identities=14% Similarity=0.216 Sum_probs=27.4
Q ss_pred ceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 040324 240 KKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYL 275 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~ 275 (488)
..+.+++|-+ +.+|.....+++.+++++|++.++.
T Consensus 152 ~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 3467777766 4589999999999999999998873
No 440
>PF10750 DUF2536: Protein of unknown function (DUF2536); InterPro: IPR019686 This entry represents proteins with unknown function appears to be restricted to Bacillus spp.
Probab=24.29 E-value=1.6e+02 Score=21.20 Aligned_cols=24 Identities=29% Similarity=0.468 Sum_probs=20.4
Q ss_pred CeEEEeeCCCHHHHHHHHHHHHhc
Q 040324 207 ATIRVFQHNTPSHLEEVLREQIAE 230 (488)
Q Consensus 207 ~~v~~~~~~d~~~Le~~l~~~~~~ 230 (488)
-++..|..+|+..||+.|.+.+..
T Consensus 10 dKVEfFEA~~l~~LEkkIneqIe~ 33 (68)
T PF10750_consen 10 DKVEFFEANDLQTLEKKINEQIEH 33 (68)
T ss_pred eeeeEEecchHHHHHHHHHHHHhc
Confidence 467778889999999999998775
No 441
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=23.62 E-value=1.2e+02 Score=27.90 Aligned_cols=34 Identities=26% Similarity=0.275 Sum_probs=27.9
Q ss_pred ceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 240 KKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 240 ~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
..+.+++|-+ +.+|....++++.+++++||+.+|
T Consensus 168 ~p~~vicEil-~~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 168 QPAGVLCELT-NPDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred CceEEEEEEe-cCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3467777764 457999999999999999999886
No 442
>COG2961 ComJ Protein involved in catabolism of external DNA [General function prediction only]
Probab=23.15 E-value=6e+02 Score=23.95 Aligned_cols=87 Identities=8% Similarity=-0.004 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHhCCCeecCCCCCCeEEEEeCCcchHHHHHHHHHHCCc---e-----EEeecCCCccCCCCeEEEee
Q 040324 373 RIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNV---A-----IVTVGFPATPLLLARARICI 444 (488)
Q Consensus 373 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi---~-----v~~~~~~~~~~~~~~iRi~~ 444 (488)
.+.+..+.+++.++.. ..+...+|.-+.+-.....|.+.|..-|| + +.|..-+-.-.+.+.+-|.|
T Consensus 171 eY~rvv~~l~~~~kRf------~~g~yaiWYPik~r~~~~~f~~~L~~~~i~kiL~iEL~VrP~~d~~gm~gSGMivINP 244 (279)
T COG2961 171 EYQRVVEALAEAYKRF------ATGTYAIWYPIKDRRQIRRFLRALEALGIRKILQIELAVRPDSDPRGMNGSGMIVINP 244 (279)
T ss_pred HHHHHHHHHHHHHHhh------cCceEEEEEeecchHHHHHHHHHHhhcCccceeeeEEEecCCCCCCCccceeEEEECC
Confidence 3444555566666654 22345555555566667788888887666 1 22211111223556788888
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 040324 445 SASHTKEDLIEALEVISRIGDL 466 (488)
Q Consensus 445 ~~~~t~edid~~l~~l~~~~~~ 466 (488)
|... ++++..++..|.+.+..
T Consensus 245 Pwtl-e~ql~~~LP~L~~~L~~ 265 (279)
T COG2961 245 PWTL-EQQLRAALPWLTTLLAQ 265 (279)
T ss_pred CccH-HHHHHHHHHHHHHHhcc
Confidence 7654 67888888888877644
No 443
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=22.86 E-value=7e+02 Score=24.13 Aligned_cols=116 Identities=11% Similarity=0.160 Sum_probs=59.2
Q ss_pred HHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc--CCCcEEEEeC--CCchHHHH--HHHhcCCeEEEeeCCCHHHHHHH
Q 040324 150 ELEECVARFVGKPAAIVFGMGYVTNSSILPVLM--GKGSLIISDS--LNHNSIVN--GARGSGATIRVFQHNTPSHLEEV 223 (488)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~--~~~~~Vl~~~--~~h~~~~~--~~~~~g~~v~~~~~~d~~~Le~~ 223 (488)
.+.+..++++...+.+++-+.|.++...+..+. ++.-.|++.+ |....... .+...|..+..++.+ .+-..
T Consensus 104 ~I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~Ds---a~~~~ 180 (301)
T TIGR00511 104 RIGEIGAKRIRDGDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVDS---AVRYF 180 (301)
T ss_pred HHHHHHHHHcCCCCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEehh---HHHHH
Confidence 333444455555566666555666655544432 3444455543 33333222 234457777776543 22233
Q ss_pred HHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC--hHHHHHHHHHcCcEEEE-Ecccc
Q 040324 224 LREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK--LPEIITICKRYKAYTYL-DEAHS 280 (488)
Q Consensus 224 l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~--l~~l~~l~~~~g~~li~-DE~~s 280 (488)
+.+. +++++=.+.|...+|.+.. -..++-+|+.+++.+++ =|.+.
T Consensus 181 m~~v------------d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a~~~K 228 (301)
T TIGR00511 181 MKEV------------DHVVVGADAITANGALINKIGTSQLALAAREARVPFMVAAETYK 228 (301)
T ss_pred HHhC------------CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEcccce
Confidence 3331 3333334666665544433 35677788999998775 45554
No 444
>COG2089 SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane]
Probab=22.85 E-value=3.6e+02 Score=26.39 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=40.3
Q ss_pred cCCCcEEEEeCCCchHHHHHHHhcCCeEEEee---CCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC
Q 040324 182 MGKGSLIISDSLNHNSIVNGARGSGATIRVFQ---HNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK 258 (488)
Q Consensus 182 ~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~---~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~ 258 (488)
+.+..++.+.+|+-.....-+...+....-+. .+++.-++.+.+. .+-+|+..++.+++ .
T Consensus 99 a~~~Gi~~~SSPfd~~svd~l~~~~~~ayKIaS~E~~~~plik~iA~~-------------~kPiIlSTGma~~~----e 161 (347)
T COG2089 99 ARKRGIIFFSSPFDLTAVDLLESLNPPAYKIASGEINDLPLIKYIAKK-------------GKPIILSTGMATIE----E 161 (347)
T ss_pred HHHcCeEEEecCCCHHHHHHHHhcCCCeEEecCccccChHHHHHHHhc-------------CCCEEEEcccccHH----H
Confidence 34445555555555444444444444333333 3455555444332 33466666666666 7
Q ss_pred hHHHHHHHHHcCcE
Q 040324 259 LPEIITICKRYKAY 272 (488)
Q Consensus 259 l~~l~~l~~~~g~~ 272 (488)
+++.+++|+++|..
T Consensus 162 i~~av~~~r~~g~~ 175 (347)
T COG2089 162 IEEAVAILRENGNP 175 (347)
T ss_pred HHHHHHHHHhcCCC
Confidence 78888888887654
No 445
>PF02639 DUF188: Uncharacterized BCR, YaiI/YqxD family COG1671; InterPro: IPR003791 This entry describes proteins of unknown function.
Probab=22.64 E-value=2.6e+02 Score=23.30 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=26.6
Q ss_pred CeEEeCCcHHHHhhhhhcccCCCcEEEEeC
Q 040324 163 AAIVFGMGYVTNSSILPVLMGKGSLIISDS 192 (488)
Q Consensus 163 ~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~ 192 (488)
+.+++.+|.++....+-..+.++|+|++.+
T Consensus 30 ~~i~Vd~g~DaaD~~I~~~~~~gDiVITqD 59 (130)
T PF02639_consen 30 EMIVVDSGFDAADFYIVNHAKPGDIVITQD 59 (130)
T ss_pred EEEEECCCCChHHHHHHHcCCCCCEEEECC
Confidence 588899999999888888889999999877
No 446
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=22.55 E-value=7.2e+02 Score=24.15 Aligned_cols=116 Identities=12% Similarity=0.142 Sum_probs=59.1
Q ss_pred HHHHHHHHHhCCCCeEEeCCcHHHHhhhhhccc--CCCcEEEEeC--CCchHHH--HHHHhcCCeEEEeeCCCHHHHHHH
Q 040324 150 ELEECVARFVGKPAAIVFGMGYVTNSSILPVLM--GKGSLIISDS--LNHNSIV--NGARGSGATIRVFQHNTPSHLEEV 223 (488)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~--~~~~~Vl~~~--~~h~~~~--~~~~~~g~~v~~~~~~d~~~Le~~ 223 (488)
...+.-++++...+.+++-+.|.++...+..+. ++.-.|++.+ |...... .-+...|..+..+..+.+.. .
T Consensus 109 ~I~~~a~~~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~Dsav~~---~ 185 (310)
T PRK08535 109 KIGEIGAKRIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVDSAVRY---F 185 (310)
T ss_pred HHHHHHHHHcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEehhHHHH---H
Confidence 333344455555566666555666655554443 3444455543 3322222 22344577777776543333 3
Q ss_pred HHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCC--hHHHHHHHHHcCcEEEE-Ecccc
Q 040324 224 LREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCK--LPEIITICKRYKAYTYL-DEAHS 280 (488)
Q Consensus 224 l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~--l~~l~~l~~~~g~~li~-DE~~s 280 (488)
+.+. +++++=.+.|...+|.+.. -..++-+|+.|++.+++ =|.+.
T Consensus 186 m~~v------------d~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a~~~K 233 (310)
T PRK08535 186 MKDV------------DKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAAETYK 233 (310)
T ss_pred HHhC------------CEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEecccce
Confidence 3321 2333324566655544332 35677788999998775 34444
No 447
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=22.29 E-value=1.8e+02 Score=30.03 Aligned_cols=53 Identities=23% Similarity=0.404 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCc-CCCCCCCCChHHHHHHHHHcC-cEEEEE
Q 040324 216 TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI-YSMEGELCKLPEIITICKRYK-AYTYLD 276 (488)
Q Consensus 216 d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v-~s~~G~~~~l~~l~~l~~~~g-~~li~D 276 (488)
|...+++.|++....| ++-++++.-| -+..|....+-+|+++|+++. .||..-
T Consensus 275 Dhh~feKiideDlaag--------kkPLilia~iGasi~GqnDmi~kildi~eahakfWLHas 329 (838)
T KOG0630|consen 275 DHHLFEKIIDEDLAAG--------KKPLILIADIGASICGQNDMILKILDICEAHAKFWLHAS 329 (838)
T ss_pred cHHHHHHHHHHHHhCC--------CCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeec
Confidence 6778999999877664 3334444222 233477778999999999996 777653
No 448
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=22.16 E-value=3e+02 Score=19.54 Aligned_cols=49 Identities=4% Similarity=0.033 Sum_probs=35.0
Q ss_pred chHHHHHHHHHHCCceEEeecCCCccCCCCeEEEeecCCCCHHHHHHHHHHHHHHH
Q 040324 409 AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIG 464 (488)
Q Consensus 409 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~iRi~~~~~~t~edid~~l~~l~~~~ 464 (488)
.-..++.+.|.+.||-+....+. .+-+++++ ...++|.++++++|.+.+
T Consensus 16 gv~~ki~~~L~~~~I~v~~i~~~-----~s~~~is~--~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 16 GVLARGLAALAEAGIEPIAAHQS-----MRNVDVQF--VVDRDDYDNAIKALHAAL 64 (66)
T ss_pred hHHHHHHHHHHHCCCCEEEEEec-----CCeeEEEE--EEEHHHHHHHHHHHHHHH
Confidence 34567888888889988543321 23466655 678999999999998764
No 449
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=21.81 E-value=71 Score=29.16 Aligned_cols=20 Identities=10% Similarity=0.464 Sum_probs=16.5
Q ss_pred hHHHHHHHHHcCcEEEEEcc
Q 040324 259 LPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 259 l~~l~~l~~~~g~~li~DE~ 278 (488)
.++++++|++|++.||+++=
T Consensus 54 a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 54 AEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHHHhCCeEEecCc
Confidence 57899999999998776553
No 450
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=21.74 E-value=3.7e+02 Score=27.60 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=45.8
Q ss_pred HHHHHhCCCCeEEeCCcHHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC
Q 040324 154 CVARFVGKPAAIVFGMGYVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (488)
Q Consensus 154 ~la~~~g~~~~i~~~sGs~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~ 215 (488)
+.-+++....++..|+|..+. .+.+.+..+-..+|+++...-..-...++..|++++.++.+
T Consensus 145 ~~~~~~~~~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~ 207 (431)
T TIGR02035 145 KFKDFFSRYSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESD 207 (431)
T ss_pred hhhhcccCceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 344555555677888888876 44455556777888888888888888889999998887754
No 451
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=21.62 E-value=3.3e+02 Score=25.75 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=28.1
Q ss_pred eEEEEEcCcCCCCC-CCCChHHHHHHHHHcCcEEEEEcc
Q 040324 241 KIMVVVEGIYSMEG-ELCKLPEIITICKRYKAYTYLDEA 278 (488)
Q Consensus 241 ~~~vi~e~v~s~~G-~~~~l~~l~~l~~~~g~~li~DE~ 278 (488)
.-+++++|-.+.+- ....+++|.+.+++.++.+++|.=
T Consensus 102 lhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 102 LHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred eeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 34666777777652 222488999999999999999953
No 452
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=21.51 E-value=44 Score=31.90 Aligned_cols=23 Identities=13% Similarity=0.213 Sum_probs=21.3
Q ss_pred ChHHHHHHHHHcCcEEEEEcccc
Q 040324 258 KLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 258 ~l~~l~~l~~~~g~~li~DE~~s 280 (488)
.++++++.|+++|+-||+|-|..
T Consensus 53 d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 53 DFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhccccccceEEEeeecc
Confidence 59999999999999999999975
No 453
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=21.44 E-value=1.3e+02 Score=27.44 Aligned_cols=33 Identities=21% Similarity=0.383 Sum_probs=27.7
Q ss_pred eEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 241 KIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 241 ~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
.+.+++|-+ +.+|....++++.+++++||+.++
T Consensus 168 p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 168 EAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred ceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEE
Confidence 467777764 567999999999999999999886
No 454
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=21.43 E-value=7e+02 Score=23.60 Aligned_cols=45 Identities=7% Similarity=0.237 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCC-CcEEEEeCC
Q 040324 148 HNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGK-GSLIISDSL 193 (488)
Q Consensus 148 ~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~-~~~Vl~~~~ 193 (488)
..+.++..++++...+.+|+.+|+.+. .+++.+... +-.|++.+.
T Consensus 93 K~~IA~~Aa~~I~dgd~Ifld~GtT~~-~la~~L~~~~~ltVvTnsl 138 (269)
T PRK09802 93 KRSVAKAAVELIQPGHRVILDSGTTTF-EIARLMRKHTDVIAMTNGM 138 (269)
T ss_pred HHHHHHHHHhhCCCCCEEEECCchHHH-HHHHhcCcCCCeEEEeCCH
Confidence 357778888888888999999998764 344454432 355666554
No 455
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=21.28 E-value=3.7e+02 Score=22.55 Aligned_cols=65 Identities=15% Similarity=0.326 Sum_probs=36.0
Q ss_pred eEEeCCcHHHH-hhhhhcccCCCc-EEEEeCCC-----chHHHHHHHhcCCeEEEeeC--CCHHHHHHHHHHHH
Q 040324 164 AIVFGMGYVTN-SSILPVLMGKGS-LIISDSLN-----HNSIVNGARGSGATIRVFQH--NTPSHLEEVLREQI 228 (488)
Q Consensus 164 ~i~~~sGs~a~-~~~~~~~~~~~~-~Vl~~~~~-----h~~~~~~~~~~g~~v~~~~~--~d~~~Le~~l~~~~ 228 (488)
.++++.|+... ..+++.+...+. .|+....+ .......+...+.++..++. .+.+++++.+++..
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccc
Confidence 35566666665 556666655533 44433333 12222233444666666664 48888888888755
No 456
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=21.25 E-value=4.3e+02 Score=26.87 Aligned_cols=59 Identities=12% Similarity=0.140 Sum_probs=44.2
Q ss_pred HHhCCCCeEEeCCcHHHH-hhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCC
Q 040324 157 RFVGKPAAIVFGMGYVTN-SSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHN 215 (488)
Q Consensus 157 ~~~g~~~~i~~~sGs~a~-~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~ 215 (488)
+.+....++..|+|..+. .+..-...+-...|+++...-..-...++..|++++.++.+
T Consensus 130 ~~~~~~~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~ 189 (404)
T cd06447 130 KLFSQYSIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETD 189 (404)
T ss_pred hcccCCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCC
Confidence 333344577788888776 44555567778889999888888888899999999988743
No 457
>PLN02672 methionine S-methyltransferase
Probab=20.56 E-value=9.5e+02 Score=28.02 Aligned_cols=117 Identities=15% Similarity=0.167 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhCC--------CCeEEeCCcHHHHhhhhhcccCCCcEEEEe----CCCchHHHHHHHhcC--------Ce
Q 040324 149 NELEECVARFVGK--------PAAIVFGMGYVTNSSILPVLMGKGSLIISD----SLNHNSIVNGARGSG--------AT 208 (488)
Q Consensus 149 ~~l~~~la~~~g~--------~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~----~~~h~~~~~~~~~~g--------~~ 208 (488)
..++..+|.|++. +.++++.+-..|+..+++.+.-+ ..+++ ..-+..+...+...+ ..
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (1082)
T PLN02672 429 KRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPR--LAIVDEHLTRWLPKKWLTSLAIENATSDSKSDDV 506 (1082)
T ss_pred hHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChH--HHhhhhhhhccCCHHHHhHhhhhcccccCccCCe
Confidence 6788888888753 46788888888876666554211 01111 111222222222221 22
Q ss_pred EEEe--eCCCHHHHHHHHHHHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEEEcccc
Q 040324 209 IRVF--QHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHS 280 (488)
Q Consensus 209 v~~~--~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~DE~~s 280 (488)
+..+ |+. .+-+.+++++. +.-+|+++......-+..-++.|.+.+++.|+.|+.|+.--
T Consensus 507 ~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1082)
T PLN02672 507 ITVIEAPRQ-SDLVIELIKKL------------KPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDH 567 (1082)
T ss_pred EEEEeCCCc-chHHHHHHHhC------------CCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhh
Confidence 2222 222 23444555542 23355553322221111248899999999999999999853
No 458
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=20.47 E-value=5.7e+02 Score=22.30 Aligned_cols=101 Identities=16% Similarity=0.248 Sum_probs=52.9
Q ss_pred HHHHHHHHHhCCCCeEEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHh
Q 040324 150 ELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIA 229 (488)
Q Consensus 150 ~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~ 229 (488)
+..+.+.+.+|+ .++++..|++-...+.-++.... -|. .+--...+..+|.-.-+.|.++++....
T Consensus 73 ~i~~sle~iyGK-RvIiiGGGAqVsqVA~GAIsEAD--------RHN-----iRGERISvDTiPlVGEE~laEAVkAV~r 138 (218)
T COG1707 73 EIHRSLEEIYGK-RVIIIGGGAQVSQVARGAISEAD--------RHN-----IRGERISVDTIPLVGEEELAEAVKAVAR 138 (218)
T ss_pred eecchHHHHhCc-EEEEECCchhHHHHHHhhcchhh--------hcc-----cccceeeeecccccChHHHHHHHHHHhc
Confidence 334445566665 57778888765544444432111 010 0100112333444445666666654211
Q ss_pred cCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEEEE
Q 040324 230 EGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYL 275 (488)
Q Consensus 230 ~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~li~ 275 (488)
-|..-++|+.++..+ |.+ -+++.++.++||+.+|.
T Consensus 139 -------LpRv~iLVLAGslMG--GkI--teaVk~lr~~hgI~VIS 173 (218)
T COG1707 139 -------LPRVGILVLAGSLMG--GKI--TEAVKELREEHGIPVIS 173 (218)
T ss_pred -------cccceeEEEeccccc--chH--HHHHHHHHHhcCCeEEE
Confidence 122445666677664 433 46778888999999885
No 459
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=20.34 E-value=6.8e+02 Score=23.04 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=53.8
Q ss_pred eEEeCCcHHHHhhhhhcccCCCcEEEE-------------eCCCchHHHHHHHhcCCeEEEeeCC-----CHHHHHHHHH
Q 040324 164 AIVFGMGYVTNSSILPVLMGKGSLIIS-------------DSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLR 225 (488)
Q Consensus 164 ~i~~~sGs~a~~~~~~~~~~~~~~Vl~-------------~~~~h~~~~~~~~~~g~~v~~~~~~-----d~~~Le~~l~ 225 (488)
++.+++|=..+.++..+... .+++.. ..+.+.-+...+...|...+.++.. ..++|.+.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l~ 82 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGILH 82 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHHH
Confidence 45667777777665555444 333222 1112223334455667766554432 3556666665
Q ss_pred HHHhcCCCCCCCCCceEEEEEcCcCCCCCCCCChHHHHHHHHHcCcEE
Q 040324 226 EQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYT 273 (488)
Q Consensus 226 ~~~~~~~p~~~~~~~~~~vi~e~v~s~~G~~~~l~~l~~l~~~~g~~l 273 (488)
+. ..-.|+++.+.+.. ....+-.+|.+.|+-.
T Consensus 83 ~~------------gv~~vv~GdI~s~~----qr~~~e~v~~~lgl~~ 114 (223)
T TIGR00290 83 TL------------DVEAVVFGAIYSEY----QKTRIERVCRELGLKS 114 (223)
T ss_pred Hc------------CCCEEEECCcccHH----HHHHHHHHHHhcCCEE
Confidence 53 23467788888766 6778888998887654
No 460
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=20.02 E-value=4.9e+02 Score=24.43 Aligned_cols=95 Identities=19% Similarity=0.183 Sum_probs=43.5
Q ss_pred EEeCCcHHHHhhhhhcccCCCcEEEEeCCCchHHHHHHHhcCCeEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 040324 165 IVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMV 244 (488)
Q Consensus 165 i~~~sGs~a~~~~~~~~~~~~~~Vl~~~~~h~~~~~~~~~~g~~v~~~~~~d~~~Le~~l~~~~~~~~p~~~~~~~~~~v 244 (488)
|++-.||...-.++..+...+..++.-...|+.-.......+..++.=+..|.+++++.++++ .. -.
T Consensus 3 ILvlgGTtE~r~la~~L~~~g~v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~------------~i-~~ 69 (249)
T PF02571_consen 3 ILVLGGTTEGRKLAERLAEAGYVIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLREN------------GI-DA 69 (249)
T ss_pred EEEEechHHHHHHHHHHHhcCCEEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhC------------CC-cE
Confidence 444556665555555666666522222333333221111112233332344777777777652 22 23
Q ss_pred EEcCcCCCCCCCCChHHHHHHHHHcCcEEE
Q 040324 245 VVEGIYSMEGELCKLPEIITICKRYKAYTY 274 (488)
Q Consensus 245 i~e~v~s~~G~~~~l~~l~~l~~~~g~~li 274 (488)
|++..+.-.-. =-+.+.+.|++.|+..+
T Consensus 70 vIDATHPfA~~--is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 70 VIDATHPFAAE--ISQNAIEACRELGIPYL 97 (249)
T ss_pred EEECCCchHHH--HHHHHHHHHhhcCcceE
Confidence 33433311000 13456677777777654
Done!