RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 040324
(488 letters)
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase
{Escherichia coli [TaxId: 562]}
Length = 401
Score = 254 bits (649), Expect = 1e-80
Identities = 106/376 (28%), Positives = 180/376 (47%), Gaps = 17/376 (4%)
Query: 95 RTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEEC 154
+ S +N + NYLG A + + S R GT H ELE+
Sbjct: 40 TVADGSHVINFCANNYLGLAN-HPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQK 98
Query: 155 VARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQH 214
+A F+G AI++ + N + L+G IISD+LNH SI++G R A + +
Sbjct: 99 LAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN 158
Query: 215 NTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTY 274
N LE L+E + +++ +G++SM+G + L + + +Y A
Sbjct: 159 NDMQELEARLKEAR-------EAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVM 211
Query: 275 LDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY-GGYIAGSKELIQYLKYN 333
+D++H++G VG+ GRG E V VDI+ GT K+ G GGY A KE++++L+
Sbjct: 212 VDDSHAVGFVGENGRGSHEYCDVM-GRVDIITGTLGKALGGASGGYTAARKEVVEWLRQR 270
Query: 334 CPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVL 393
+L++ S++P I +++V + R+ N+ FR ++ GF L
Sbjct: 271 SRPYLFSNSLAPAIVAASIKVLEMVEAGS------ELRDRLWANARQFREQMSAAGFT-L 323
Query: 394 GDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDL 453
D ++P+M+ + F+RE K+ + + +P P AR R +SA+HT E +
Sbjct: 324 AGADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQI 383
Query: 454 IEALEVISRIGDLVGI 469
A+E +RIG +G+
Sbjct: 384 TRAVEAFTRIGKQLGV 399
>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase
(8-amino-7-oxonanoate synthase, AONS) {Escherichia coli
[TaxId: 562]}
Length = 383
Score = 219 bits (557), Expect = 2e-67
Identities = 95/364 (26%), Positives = 175/364 (48%), Gaps = 19/364 (5%)
Query: 101 RCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVG 160
+ LN S +YLG + +++ + S G +H LEE +A ++G
Sbjct: 39 QYLNFSSNDYLGLSH-HPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG 97
Query: 161 KPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHL 220
A++F G+ N +++ +M K I +D L+H S++ A S + +R F HN +HL
Sbjct: 98 YSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHL 157
Query: 221 EEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHS 280
+L + MVV EG++SM+G+ L EI + +++ + +D+AH
Sbjct: 158 ARLLA----------SPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHG 207
Query: 281 IGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYA 340
G +G+ GRG C L V ++++ TF K FG G + S + YL +Y+
Sbjct: 208 TGVIGEQGRGSCWLQKVKP---ELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYS 264
Query: 341 TSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPV 400
TS+ P A+ + +++ V+ S G + ++ FR+ +Q + F L D+ S +
Sbjct: 265 TSMPPAQAQALRASLAVIR----SDEGDARREKLAALITRFRAGVQDLPFT-LADSCSAI 319
Query: 401 MPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVI 460
P++V + ++ + + +Q + + P P AR R+ ++A+H +D+ LEV+
Sbjct: 320 QPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVL 379
Query: 461 SRIG 464
G
Sbjct: 380 HGNG 383
>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter
capsulatus [TaxId: 1061]}
Length = 396
Score = 192 bits (488), Expect = 5e-57
Identities = 99/390 (25%), Positives = 172/390 (44%), Gaps = 21/390 (5%)
Query: 79 FDVVERYSNDNNKT--LKRTNNVSRCLNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTC 136
F +ER K + +YLG + ++L+ +
Sbjct: 22 FIDIEREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQ-HPVVLAAMHEALEAVGAGSG 80
Query: 137 SSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM--GKGSLIISDSLN 194
+R GT A H LE +A K AA+VF Y N + L L G +I SDSLN
Sbjct: 81 GTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLN 140
Query: 195 HNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254
H S++ G + + R+F+HN +HL E P ++ E +YSM+G
Sbjct: 141 HASMIEGIKRNAGPKRIFRHNDVAHLRE---------LIAADDPAAPKLIAFESVYSMDG 191
Query: 255 ELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFG 314
+ + EI I + + A TY+DE H++G G G GV E G+ +DI GT +K++G
Sbjct: 192 DFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMH-RIDIFNGTLAKAYG 250
Query: 315 SYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARI 374
+GGYIA S ++ ++ P +++TS+ P A ++I + +G
Sbjct: 251 VFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKL----RDAQ 306
Query: 375 RENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIVTVGFPAT 433
+ ++ + +L+ +G ++ D+ S ++P+++ +P + S L V + + FP
Sbjct: 307 QMHAKVLKMRLKALGMPII-DHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTV 365
Query: 434 PLLLARARICISASHTKEDLIEALEVISRI 463
P R R S H + + + + +
Sbjct: 366 PRGTERLRFTPSPVHDLKQIDGLVHAMDLL 395
>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS)
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 364
Score = 101 bits (252), Expect = 3e-24
Identities = 50/355 (14%), Positives = 119/355 (33%), Gaps = 20/355 (5%)
Query: 120 CTPRVIDSLKKY------SHSTCSSRVD-GGTLALHNELEECVARFVGKPAAIVFGMGYV 172
T +L ++ + R+D T +H+ + + +F+G A V
Sbjct: 14 LTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCDVARVTNGARE 73
Query: 173 TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQ 232
+++ L K + ++ D H S A +G I + E A+
Sbjct: 74 AKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITP-ENFAQTI 132
Query: 233 PRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVC 292
T++ + ++ ++ G L + +I +C Y ++ A++IG + + + +
Sbjct: 133 EETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIG 192
Query: 293 ELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQII 352
D + G S + G + +E + + + +
Sbjct: 193 A-------DFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGA 245
Query: 353 SAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVS 412
+ I ++ ++ E + F ++++K+G + LGDN +M ++ +
Sbjct: 246 TIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLGIKQLGDNPHNH-DLMFFHAEVLY 304
Query: 413 SFSRECLKQNVAIVTV----GFPATPLLLARARICISASHTKEDLIEALEVISRI 463
S++ + L R + + E++ L I
Sbjct: 305 EISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEI 359
>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Thermotoga maritima [TaxId: 2336]}
Length = 343
Score = 99.9 bits (247), Expect = 9e-24
Identities = 42/318 (13%), Positives = 87/318 (27%), Gaps = 15/318 (4%)
Query: 148 HNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGA 207
NELE A GK AA+ G + N + +G +I ++ +H +
Sbjct: 36 INELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEVGAMAVL 95
Query: 208 TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIIT-IC 266
+ + + + +PR + ++ +E ++ G E I IC
Sbjct: 96 SGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEIC 155
Query: 267 KRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKEL 326
K + + + +M G + G ++
Sbjct: 156 TIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDF 215
Query: 327 IQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQ 386
I+ + + A A ++ R + R + +
Sbjct: 216 IERARKARKMLGGGMRQAGVLA-----AAGIIALTKMVDRLKEDHENARFLALKLKEIGY 270
Query: 387 KMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISA 446
+ E + N V+ F V V R+
Sbjct: 271 SVNPEDVKTN--MVILRTDNLKVNAHGFIEALRNSGVLANAVSDT-------EIRLVTHK 321
Query: 447 SHTKEDLIEALEVISRIG 464
++ D+ EAL + ++
Sbjct: 322 DVSRNDIEEALNIFEKLF 339
>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas
putida [TaxId: 303]}
Length = 345
Score = 90.7 bits (223), Expect = 1e-20
Identities = 46/366 (12%), Positives = 95/366 (25%), Gaps = 33/366 (9%)
Query: 103 LNLGSYNYLGFAAADEYCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP 162
L S N G +P V +L K+S GT L +++ +
Sbjct: 5 LGFSSDNIAG-------ASPEVAQALVKHSSGQAGPY---GTDELTAQVKRKFCEIFERD 54
Query: 163 AAIVF-GMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSH-- 219
+ G N+ L + I +H + +
Sbjct: 55 VEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAA 114
Query: 220 ---LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLD 276
+ + + + + L ++ I +CK ++D
Sbjct: 115 KLDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMD 174
Query: 277 EAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPA 336
+ A+ G E+ + G + + + L + Y
Sbjct: 175 GSRFANALVSLGCSPAEM-TWKAGVDALSFGATKNGVLAAEAIVLFNTSLATEMSYRRKR 233
Query: 337 HLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDN 396
+ +S + QI + + + + + + G EVLG
Sbjct: 234 AGHLSSKMRFLSAQIDAYLTDDLWLRNARK------ANAAAQRLAQGLEGLGGVEVLGGT 287
Query: 397 DSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEA 456
++ ++ + + LK GF R S + T ED+
Sbjct: 288 EANILFCRLDSA-----MIDALLKAGF-----GFYHDRWGPNVVRFVTSFATTAEDVDHL 337
Query: 457 LEVISR 462
L +
Sbjct: 338 LNQVRL 343
>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain
{Lactobacillus sp., strain 30a [TaxId: 1591]}
Length = 462
Score = 91.6 bits (226), Expect = 2e-20
Identities = 54/425 (12%), Positives = 110/425 (25%), Gaps = 59/425 (13%)
Query: 79 FDVVERYSNDNNKTL-----KRTNNVSR-CLNLGSYNYLGFAAADEYCTPRVIDSLKKYS 132
F ++ Y + + + Y++ G +
Sbjct: 4 FKSLKEYVSRYLIQFDCPGHQGGQYYRKHPAGREFYDFFGETV---------------FR 48
Query: 133 HSTCSSRVDGGTLALHN----ELEECVARFVGKPAAIVF-GMGYVTNSSILPVLMGKGSL 187
C++ V G L +H E+ AR G N+++ L+ G L
Sbjct: 49 ADLCNADVALGDLLIHEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDL 108
Query: 188 IISDSLNHNSIVNGARGSGATIRVFQHN------------TPSHLEEVLREQIAEGQPRT 235
++ D NH S+ N A V+ E+ +RE A+ P
Sbjct: 109 VLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPER 168
Query: 236 RRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELL 295
+ + + V + + +G + E++ Y D A L
Sbjct: 169 AKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPL 228
Query: 296 GVDTSD----VDIMMGTFSKSFGSYGG--YIAGSKELIQYLKYNCPAHLYATSISP---- 345
+D I++ + K + I I+ C + S +
Sbjct: 229 LIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMST 288
Query: 346 PAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIM 404
+ +A+ V G + + + R KL K
Sbjct: 289 SPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKW 348
Query: 405 VYNPAKVSSFSRECLKQNVAIVTVGFPA----------TPLLLARARICISASHTKEDLI 454
+ + + + + + +L I ++ +
Sbjct: 349 EDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGV 408
Query: 455 EALEV 459
A V
Sbjct: 409 PATIV 413
>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase)
{Escherichia coli [TaxId: 562]}
Length = 467
Score = 88.1 bits (217), Expect = 3e-19
Identities = 53/434 (12%), Positives = 103/434 (23%), Gaps = 58/434 (13%)
Query: 101 RCLNLGSYNYLGFAAADEY-----CTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECV 155
+ N + D + + + + G+ + L E V
Sbjct: 25 EAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAFSGS-RSYYALAESV 83
Query: 156 ARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG---------ARGSG 206
G I G +PVL+ K + + ++ +G
Sbjct: 84 KNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQING 143
Query: 207 ATIRVFQHNTPSHLEEVLR----------EQIAEGQPRTRRPWKKIMVVVEGIYSMEGEL 256
T+R E+ E P+ + L
Sbjct: 144 CTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL 203
Query: 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDV--------DIMMGT 308
L + +I K+Y +D A + E + D++ +
Sbjct: 204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMS 263
Query: 309 FSKSFGSYGGY-IAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRG 367
K G + + + C P A++ +
Sbjct: 264 AKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN 323
Query: 368 AQKLARIRENSNFFRSKLQKM--------GFEVLGDNDSPVMPIMVYNPAKVSSFSRECL 419
LA + L+++ G D + I +
Sbjct: 324 LDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYK 383
Query: 420 KQNVAIVTVGFPATPLLLARA----------RICISA-SHTKEDL---IEAL-EVISRIG 464
+ V +G R+ I ++T+ + IEA V
Sbjct: 384 VAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443
Query: 465 DLVGIKYFPAEPKK 478
++ G+ F EPK
Sbjct: 444 NIKGLT-FTYEPKV 456
>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS)
{Methanococcus maripaludis [TaxId: 39152]}
Length = 434
Score = 77.3 bits (189), Expect = 7e-16
Identities = 47/398 (11%), Positives = 114/398 (28%), Gaps = 48/398 (12%)
Query: 99 VSRCLNLGSYNYLGFAAADEYC----TPRVIDSLKKYSHSTCSS--------RVDGGTL- 145
+ + + E + + + H S + G ++
Sbjct: 52 LKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIM 111
Query: 146 -ALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLM-----GKGSLIISDSLNHNSIV 199
AL N++ E + +G T SI L +++I +H S +
Sbjct: 112 YALTNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI 170
Query: 200 NGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKL 259
G +R+ + V E I + + V+ + +
Sbjct: 171 KAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDI 230
Query: 260 PEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGY 319
EI IC+ Y ++ A++I + VD ++ + K+ + G
Sbjct: 231 VEIAKICENYDIPHIINGAYAIQNNYYLEKLKK----AFKYRVDAVVSSSDKNLLTPIGG 286
Query: 320 IAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSN 379
+++K ++ S +P + +G + + +
Sbjct: 287 GLVYSTDAEFIKEISLSYPGRASATPV---VNTLVSLLSMGSKNYLELVK---NQKNSKK 340
Query: 380 FFRSKLQKMG---FEVLGDNDSPVMPIMVYN--PAKVSSFSRECLKQNVAIVT------- 427
L + D +SP+ + N P ++++ +
Sbjct: 341 LLDELLNDLSKKTGGKFLDVESPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGN 400
Query: 428 --VGFPATPLLLARARICISASHTKEDLIEALEVISRI 463
+G + + + ED++ ++ + +I
Sbjct: 401 CYLGTYTHDYI----VMNAAIGVRTEDIVNSVSKLEKI 434
>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola
[TaxId: 549]}
Length = 456
Score = 73.3 bits (179), Expect = 2e-14
Identities = 38/377 (10%), Positives = 99/377 (26%), Gaps = 58/377 (15%)
Query: 149 NELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGAT 208
LE+ V G + G + + + + G + + + + +
Sbjct: 78 YHLEKTVKELFGFKHIVPTHQGRGAENLLSQLAIKPGQYVAGNMYFTTTRFHQEKNGATF 137
Query: 209 IRVF--------------QHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG 254
+ + + L +++E+ AE +
Sbjct: 138 VDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAENIAYICLAVTVNL-----AGGQPV 192
Query: 255 ELCKLPEIITICKRYKAYTYLDEAHSIGAV--------GKTGRGVCELLGVDTSDVDIMM 306
+ + + + Y + D + G + +++ S D
Sbjct: 193 SMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCT 252
Query: 307 GTFSKSFGSYGGYIA--GSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGS 364
+ K G +E+ K + S A + A+ + + E
Sbjct: 253 MSGKKDCLVNIGGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDME-AMAIGLRE--- 308
Query: 365 CRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPI---MVYNPAKVSSFSRE---- 417
+ + + + KL++ G ++ + + F +
Sbjct: 309 AMQYEYIEHRVKQVRYLGDKLREAGVPIVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAA 368
Query: 418 --CLKQNVAIVTVGFPATPLLLA----------RARICISAS-HTKEDL---IEAL-EVI 460
++ V + G + R+ I +T + + + ++
Sbjct: 369 SIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLY 428
Query: 461 SRIGDLVGIKYFPAEPK 477
D+ G+ F EPK
Sbjct: 429 QHKEDIRGLT-FVYEPK 444
>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase
{Leishmania major [TaxId: 5664]}
Length = 340
Score = 65.7 bits (158), Expect = 2e-12
Identities = 42/346 (12%), Positives = 103/346 (29%), Gaps = 19/346 (5%)
Query: 120 CTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVF--GMGYVTNSSI 177
P+++D + + + + + G + + + + +P A V G TN
Sbjct: 12 MHPKILDLMARDNMTQHAGY---GQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIA 68
Query: 178 LPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRR 237
+ + +I+ L H S +V P V + A + R+
Sbjct: 69 CSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEH 128
Query: 238 PWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGV 297
+V + + + K + YL + A + L
Sbjct: 129 MVIPKLVYISNTTEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLAD 188
Query: 298 DTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQV 357
D+ +K+ G +G + + ++ + A +
Sbjct: 189 IARLTDMFYIGATKAGGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMK 248
Query: 358 VIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRE 417
+ K+A ++ L+ G + + S + ++ ++ + +
Sbjct: 249 DNLFFELGAHSNKMA------AILKAGLEACGIRLAWPSASNQLFPIL-ENTMIAELNND 301
Query: 418 CLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463
V + G R+C S + +++ +EV+ R+
Sbjct: 302 FDMYTVEPLKDG-------TCIMRLCTSWATEEKECHRFVEVLKRL 340
>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 445
Score = 62.3 bits (150), Expect = 5e-11
Identities = 59/420 (14%), Positives = 123/420 (29%), Gaps = 71/420 (16%)
Query: 99 VSRCLNLGSYNYLGFAAADEYCTPRVIDSL-----KKYSHSTCSS--------RVDGGTL 145
+ + S N+LG E RV +L ++ H S + G +L
Sbjct: 33 LHELAVMDSNNFLGNCGVGER-EGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL 91
Query: 146 --ALHNELEECVARFVGKPA-AIVFGMGYVTNSSILPVLM------GKGSLIISDSLNHN 196
+ N L V + G + A F + T S+ + K II ++
Sbjct: 92 LNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQK 151
Query: 197 SIVNGARGSGATIR----VFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSM 252
S +G V + + + + +I E P + +
Sbjct: 152 SCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPE-----HILCLHSTTACFA 206
Query: 253 EGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKS 312
+L E+ IC Y ++ A+ + + G +D + + K+
Sbjct: 207 PRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ---GARVGRIDAFVQSLDKN 263
Query: 313 FGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLA 372
F G + +++ + S SP + + + G + L
Sbjct: 264 FMVPVGGAIIAGFNEPFIQDISKMYPGRASASP------SLDVLITLLSLGCSGYRKLLK 317
Query: 373 RIRENSNFFRSKLQKM----GFEVLGDNDSPVMPIMVYN---------PAKVSSFSREC- 418
+E + ++L+K+ +L +P+ M ++ S
Sbjct: 318 ERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQ 377
Query: 419 -----------LKQNVAIVTVGFPATPLLLARARICISAS--HTKED---LIEALEVISR 462
++ GF + A + +A+ +D I+ L+
Sbjct: 378 VSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLN 437
>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase)
{Proteus vulgaris [TaxId: 585]}
Length = 465
Score = 56.1 bits (134), Expect = 5e-09
Identities = 44/380 (11%), Positives = 92/380 (24%), Gaps = 53/380 (13%)
Query: 149 NELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNH-------NSIVNG 201
+L++ I G + + PVL+ ++
Sbjct: 78 YDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAH 137
Query: 202 ARGSGATIR------VFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGE 255
+G F T + + + + +V + G
Sbjct: 138 VELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGG 197
Query: 256 LC----KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMG---- 307
L E+ I K++ + +D A + +V M
Sbjct: 198 QPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD 257
Query: 308 --TFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGED 362
T S G +A + + ++
Sbjct: 258 ALTMSAKKDPLLNIGGLVAIRDNEEIFTLAR--QRCVPMEGFVTYGGLAGRDMAAMVQGL 315
Query: 363 GSCRGAQKLARIRENSNFFRSKLQKMGFEVL---GDNDSPVMPIMVYNPAKVSSF----- 414
+ L + +L++ G + G + V + F
Sbjct: 316 EEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAV 375
Query: 415 -SRECLKQNVAIVTVGFPATPLLLAR----------ARICISA-SHTKEDL---IEAL-E 458
+ L+ V V +G A R+ I+ +T + + +AL
Sbjct: 376 INALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIG 435
Query: 459 VISRIGDLVGIKYFPAEPKK 478
+ + L G++ F EP
Sbjct: 436 LKEKFATLKGLE-FEYEPPV 454
>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 49.2 bits (116), Expect = 6e-07
Identities = 58/391 (14%), Positives = 127/391 (32%), Gaps = 57/391 (14%)
Query: 110 YLGFAAADEYCTPRVIDSLKKY-----SHSTCSSRVDGGTLALHNELEEC---VARFVG- 160
YL ++A PRV + + ++ + +SR ++ +A VG
Sbjct: 5 YLDYSAT-TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGA 63
Query: 161 KPAAIVFGMGYVTNSSILPVLMG-------KGSLIISDSLNHNSIVNGAR---GSGATIR 210
P IVF G S + G KG II+ H ++++ R G +
Sbjct: 64 DPREIVFTSG--ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVT 121
Query: 211 VFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYK 270
++ L+E A + T +V + + + G + + I +C+
Sbjct: 122 YLAPQRNGIID--LKELEAAMRDDTI------LVSIMHVNNEIGVVQDIAAIGEMCRARG 173
Query: 271 AYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIAGSKELIQY 329
++D S+G + + VD+M + K +G G G + ++
Sbjct: 174 IIYHVDATQSVG---------KLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVR 224
Query: 330 LKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK-M 388
++ + + A ++ R+R N + ++
Sbjct: 225 IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDIE 284
Query: 389 GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLAR--------- 439
+ GD + I+ + V S +++A+ + + L
Sbjct: 285 EVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLN 344
Query: 440 -------ARICISASHTKEDLIEALEVISRI 463
R + T+E++ +E++ +
Sbjct: 345 DELAHSSIRFSLGRFTTEEEIDYTIELVRKS 375
>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium
lapideum [TaxId: 32060]}
Length = 388
Score = 48.2 bits (114), Expect = 1e-06
Identities = 49/375 (13%), Positives = 108/375 (28%), Gaps = 48/375 (12%)
Query: 111 LGFAAADEYCTPRVIDSLKK--------YSHSTCSSRVDGGTLALHNELEECVARFVGKP 162
D ++++ K Y + G L + + + R G
Sbjct: 35 FSAGEPDFNTPKHIVEAAKAALEQGKTRYGPA-------AGEPRLREAIAQKLQRDNGLC 87
Query: 163 AA---IVFGMGYV-TNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPS 218
I+ G + +++ ++ G +I + S + + T + +
Sbjct: 88 YGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVET 147
Query: 219 HLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICK---RYKAYTYL 275
+ + P+T+ ++V + G + E+ I + +
Sbjct: 148 QFKVSPEQIRQAITPKTK------LLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLS 201
Query: 276 DEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---GYIAGSKELIQYLKY 332
DE + + + ++ F+K++ G G++AG L++
Sbjct: 202 DEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATK 261
Query: 333 NCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKM-GFE 391
E+ + LA E + L M G E
Sbjct: 262 IQGHSTSNVCTFAQYGAIAAY-------ENSQDCVQEMLAAFAERRRYMLDALNAMPGLE 314
Query: 392 VLGDNDSPVMPIMVYNPAKVSS-FSRECLKQ-NVAIVT-VGFPATPLLLARARICISASH 448
+ + M + + S F E L Q VA V F A + R+ +
Sbjct: 315 CPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCI----RLSYATD- 369
Query: 449 TKEDLIEALEVISRI 463
+ + +E + +
Sbjct: 370 -LDTIKRGMERLEKF 383
>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus
thermophilus [TaxId: 274]}
Length = 382
Score = 47.8 bits (113), Expect = 2e-06
Identities = 38/213 (17%), Positives = 75/213 (35%), Gaps = 21/213 (9%)
Query: 257 CKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSY 316
L + + + Y DE + G G + + + +K+F
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIY----EHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMT 239
Query: 317 G---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLAR 373
G GY G KE+I+ + + ++ SP Q + + E
Sbjct: 240 GWRIGYACGPKEVIKAMA----SVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295
Query: 374 IRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSS--FSRECLKQNVAIVT-VGF 430
R + L +G + + + + + +M +P + L+ VA+V F
Sbjct: 296 YRRRRDLLLEGLTALGLKAVRPSGAFYV-LMDTSPIAPDEVRAAERLLEAGVAVVPGTDF 354
Query: 431 PATPLLLARARICISASHTKEDLIEALEVISRI 463
A + R+ + S +E+L +ALE +R+
Sbjct: 355 AAFGHV----RLSYATS--EENLRKALERFARV 381
>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 405
Score = 46.1 bits (109), Expect = 6e-06
Identities = 54/312 (17%), Positives = 102/312 (32%), Gaps = 27/312 (8%)
Query: 109 NYLGFAAADEYCTPRVIDSL-----KKYSHSTCSSRVDGGTLALHNELEE-CVAR----F 158
+ A++ + + V+++ KY+ R GG + +EE R F
Sbjct: 24 AKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVD-IVEELARERAKQLF 82
Query: 159 VGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPS 218
+ A + G N ++ ++ G ++ +L+H + + +
Sbjct: 83 GAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYG 142
Query: 219 HLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEA 278
E + + + R K++V Y + K EI AY +D A
Sbjct: 143 VDPETHVIDYDDVREKARLHRPKLIVAAASAYPRIIDFAKFREI---ADEVGAYLMVDMA 199
Query: 279 HSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSF-GSYGGYIAGSKELIQYLKYNCPAH 337
H G V L + T K+ G GG I ++ + +
Sbjct: 200 HIAGLV------AAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCQEQFAKQIDKAIFPG 253
Query: 338 LYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFE-VLGDN 396
+ + I+A V GE R+ +N+ S LQ GF V G
Sbjct: 254 IQGGPLMHV-----IAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEGFTLVSGGT 308
Query: 397 DSPVMPIMVYNP 408
D+ ++ + +
Sbjct: 309 DNHLLLVDLRPQ 320
>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum)
[TaxId: 4682]}
Length = 425
Score = 42.4 bits (99), Expect = 8e-05
Identities = 21/184 (11%), Positives = 52/184 (28%), Gaps = 28/184 (15%)
Query: 303 DIMMGTFSKSF---GSYGGYIAGSKELI--QYLKYNCPAHLYATSISPPAAEQIISAIQV 357
DI++ T SK GS G+ E + L Y + + +++ +
Sbjct: 243 DILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVA 302
Query: 358 VIGE---DGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSP-------------VM 401
++ ++RE + L + +
Sbjct: 303 MVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPS 362
Query: 402 PIMVYNPAKVSSFSRECL-KQNVAIVT-VGFPATPLLLARARICISASHTKEDLIEALEV 459
V + + + VGF A+ + R+ + + ++D + +
Sbjct: 363 YAWVKCEWEEDKDCYQTFQNGRINTQNGVGFEASSRYV---RLSLIKT--QDDFDQLMYY 417
Query: 460 ISRI 463
+ +
Sbjct: 418 LKDM 421
>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 476
Score = 39.8 bits (92), Expect = 7e-04
Identities = 46/346 (13%), Positives = 92/346 (26%), Gaps = 42/346 (12%)
Query: 142 GGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNG 201
+ A + AR G +T ++L L+ + H+S+
Sbjct: 147 SASEA--TLVALLAARTKVVRRLQAASPG-LTQGAVLEKLV-----AYASDQAHSSVERA 198
Query: 202 ARGSGATIRVFQHNTPSHLE-EVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLP 260
G ++ + + L+E + + P VV + L
Sbjct: 199 GLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIP---FFVVATLGTTSCCSFDNLL 255
Query: 261 EIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYI 320
E+ IC + ++D A G+ L GV+ D K
Sbjct: 256 EVGPICHEEDIWLHVD-AAYAGSAFICPEFRHLLNGVE--FADSFNFNPHKWLLVNFDCS 312
Query: 321 AGSKELIQYLKYNCPAHLYATSISPPAAEQIIS---------------AIQVVIGEDGSC 365
A + L S + I + V G
Sbjct: 313 AMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVK 372
Query: 366 RGAQKLARIRENSNFFRSKLQKM-GFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVA 424
+ + + S+ F + + + FEV + + ++ + + L+
Sbjct: 373 GLQAYIRKHVQLSHEFEAFVLQDPRFEVCAE---VTLGLVCFRLKGSDGLNEALLE---R 426
Query: 425 IVTVG--FPATPLLLARA--RICISASHTKEDLIE-ALEVISRIGD 465
I + L + R I + + + A E I +
Sbjct: 427 INSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAA 472
>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase
(aminotransferase) {Synechococcus sp., strain GR6
[TaxId: 1131]}
Length = 427
Score = 39.4 bits (91), Expect = 7e-04
Identities = 66/379 (17%), Positives = 106/379 (27%), Gaps = 57/379 (15%)
Query: 119 YCTPRVIDSLKKYSHSTCSSRVDGGTLALHNELEECVARFVGKP--------------AA 164
+ P VI++LK S AL N L E V V A
Sbjct: 68 HAHPEVIEALKVAMEKGTSFGAPC---ALENVLAEMVNDAVPSIEMVRFVNSGTEACMAV 124
Query: 165 IVFGMGYVTNSSIL-----PVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSH 219
+ Y I+ L+ + S + + G TP +
Sbjct: 125 LRLMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN 184
Query: 220 LEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEG----ELCKLPEIITICKRYKAYTYL 275
E ++ AE V++E I G + L + I + A
Sbjct: 185 DLEAVKALFAENPGEI------AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVF 238
Query: 276 DEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCP 335
DE + GV E GV D+ G G G +E++Q + P
Sbjct: 239 DEVMT--GFRIAYGGVQEKFGVTP---DLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGP 293
Query: 336 AHLYATSISPPAAEQIISAIQVVIGEDGSC-----------RGAQKLARIRENSNFFRSK 384
+ T P A ++ + G+ G +A+ ++
Sbjct: 294 MYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQV 353
Query: 385 LQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICI 444
GF + K S F R L+Q + + F
Sbjct: 354 SGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF---------EAGFT 404
Query: 445 SASHTKEDLIEALEVISRI 463
S +HT+ED+ L +
Sbjct: 405 SLAHTEEDIDATLAAARTV 423
>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase,
GABA-aminotransferase {Escherichia coli [TaxId: 562]}
Length = 425
Score = 39.4 bits (91), Expect = 8e-04
Identities = 37/239 (15%), Positives = 78/239 (32%), Gaps = 38/239 (15%)
Query: 243 MVVVEGIYSMEG----ELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVD 298
+V+E + G + + +C + DE GA E +GV
Sbjct: 201 AIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE-VQSGAGRTGTLFAMEQMGVA 259
Query: 299 TSDVDIMMGTFSKSFGSYGGY----IAGSKELIQYLKYNCPAHLYATSISPPAAEQIISA 354
+ TF+KS GG+ + G E++ + YA + P A +
Sbjct: 260 PD-----LTTFAKSIA--GGFPLAGVTGRAEVMDAVAPGGLGGTYAGN--PIACVAALEV 310
Query: 355 IQVVIGEDGSCRGAQKLARIRENSNFFRSKLQK----------MGFEVLGDNDSPVMPIM 404
++V E+ + ++++ K + + E+ D D
Sbjct: 311 LKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDH-----N 365
Query: 405 VYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463
+ + + + +++ G L RI + + + + LE+IS+
Sbjct: 366 KPDAKLTAEIVARARDKGLILLSCGPYYNVL-----RILVPLTIEDAQIRQGLEIISQC 419
>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB
{Escherichia coli [TaxId: 562]}
Length = 450
Score = 38.7 bits (89), Expect = 0.001
Identities = 28/300 (9%), Positives = 66/300 (22%), Gaps = 26/300 (8%)
Query: 187 LIISDSLNHNSIVNGARGSGA---TIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIM 243
++ AR I + + + E E T
Sbjct: 154 NLVCGP-VQICWHKFARYWDVELREIPMRPGQLFMDPKR-MIEACDE---NTIGVVPTFG 208
Query: 244 VVVEGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVD 303
V G Y L + ++D A + + V
Sbjct: 209 VTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLP--RVK 266
Query: 304 IMMGTFSKSFGSY---GGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIG 360
+ + K + G I +E + +L + + +
Sbjct: 267 SISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 326
Query: 361 EDGSCRGAQKLAR----IRENSNFFRSKLQKMG-FEVLGDNDS-PVMPIMVYNPAKVSS- 413
+ G + + + + + ++ K+G +E + +P + +
Sbjct: 327 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDP 386
Query: 414 ------FSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRIGDLV 467
S + + + RI + LE +
Sbjct: 387 GYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYL 446
>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase
{Escherichia coli [TaxId: 562]}
Length = 405
Score = 37.6 bits (86), Expect = 0.002
Identities = 63/412 (15%), Positives = 131/412 (31%), Gaps = 64/412 (15%)
Query: 100 SRCLNLGSYNYLGFAAADEYCTPRVIDSLKKY---SHSTCSSRVDGGTLALHNELEEC-- 154
SR +N YL AA+ +VID+ ++ ++ + + ++E
Sbjct: 15 SREVNGLPLAYLDSAAS-AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRK 73
Query: 155 -VARFVGKPAAIVFGMGYVTNSSILPVLMG-------KGSLIISDSLNHNSIVNGARG-- 204
+ F+ +A T I V G II + H++ + +
Sbjct: 74 RASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLC 133
Query: 205 --SGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLPEI 262
GA +RV N L+ L +TR ++ + + ++ G L E+
Sbjct: 134 ARVGAELRVIPLNPDGTLQ--LETLPTLFDEKTR------LLAITHVSNVLGTENPLAEM 185
Query: 263 ITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG-GYIA 321
IT+ ++ A +D A ++ + + V D D + + K +G G G +
Sbjct: 186 ITLAHQHGAKVLVDGAQAV---------MHHPVDVQALDCDFYVFSGHKLYGPTGIGILY 236
Query: 322 GSKELIQ--------------------YLKYNCPAHLYATSISPPAAEQIISAIQVVIGE 361
+ L+Q P A + + + +A++ V
Sbjct: 237 VKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSAL 296
Query: 362 DGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ 421
+ + + + + G + +
Sbjct: 297 GLNNIAEYEQNLMHYALSQLE---SVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNY 353
Query: 422 NVAIVTVGFPATPLLLAR-----ARICISASHTKEDLIEALEVISRIGDLVG 468
+A+ T A PL+ R ++ +T E++ + + RI L+G
Sbjct: 354 GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLLG 405
>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 388
Score = 37.1 bits (85), Expect = 0.004
Identities = 45/326 (13%), Positives = 92/326 (28%), Gaps = 22/326 (6%)
Query: 146 ALHNELEECVARFVGKPAAIVFGMGYVTNSSILP-VLMGKGSLIISDSLNHNSIVNGARG 204
A+ +L++ I+ +G + + G ++ + S
Sbjct: 70 AIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVIL 129
Query: 205 SGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELC---KLPE 261
+G + E +TR +++ + G + L E
Sbjct: 130 AGGKPVEVPTYEEDEFRLNVDELKKYVTDKTR------ALIINSPCNPTGAVLTKKDLEE 183
Query: 262 IITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYG---G 318
I + DE + + R + I + FSK+F G G
Sbjct: 184 IADFVVEHDLIVISDEVYEH-FIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLG 242
Query: 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRENS 378
++A + + P +A + + E +
Sbjct: 243 FVA-----APSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRR 297
Query: 379 NFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSS-FSRECLKQNVAIVTVGFPATPLLL 437
+L +MG + + + + + S FS LK+ V G
Sbjct: 298 KLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGE 357
Query: 438 ARARICISASHTKEDLIEALEVISRI 463
RI + + E L EA++ + R+
Sbjct: 358 GYVRISYATA--YEKLEEAMDRMERV 381
>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus
furiosus [TaxId: 2261]}
Length = 395
Score = 35.7 bits (81), Expect = 0.011
Identities = 20/167 (11%), Positives = 49/167 (29%), Gaps = 14/167 (8%)
Query: 304 IMMGTFSKSFGSYG-----GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVV 358
I+M SK + + G Y + + ++ L + P Q + +
Sbjct: 230 IVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAI-DRLARIRLCPNTPAQFAAIAGLT 288
Query: 359 IGEDGSCRGAQKLARIRENSNFFRSKLQKMG-FEVLGDNDSPVMPIMVYNPAKVSS--FS 415
D + + +++E ++ +L ++ + + + + F
Sbjct: 289 GPMDYL---KEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFV 345
Query: 416 RECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462
+ L + G R E L EA++ +
Sbjct: 346 LDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPP--IEILEEAMDRFEK 390
>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp.
[TaxId: 1143]}
Length = 381
Score = 34.1 bits (76), Expect = 0.032
Identities = 11/78 (14%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 389 GFEVLGDND--SPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISA 446
L + + ++ V +P + ++ +Q + + T+ P R C
Sbjct: 309 HVHCLATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIADPDC------IRACCHY 362
Query: 447 SHTKEDLIEALEVISRIG 464
+E++ L ++ G
Sbjct: 363 ITDEEEINHLLARLADFG 380
>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium
yoelii yoelii [TaxId: 73239]}
Length = 404
Score = 34.0 bits (77), Expect = 0.037
Identities = 39/235 (16%), Positives = 59/235 (25%), Gaps = 40/235 (17%)
Query: 244 VVVEGIYSMEGELCK----LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDT 299
+VE I G + L + ICK+Y DE + G V
Sbjct: 190 FIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNV-- 246
Query: 300 SDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVV- 358
D++ K+ I+ + P +T P A I V
Sbjct: 247 -KPDVI--LLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVL 303
Query: 359 -------IGEDGSCRGAQKLARIRENSNFFRSKLQK---MGFEVLGDNDSPVMPIMVYNP 408
E + L R ++S R K E
Sbjct: 304 INEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIE------------FKNEL 351
Query: 409 AKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISRI 463
V + + + V R+ TKE L E E+I +
Sbjct: 352 VNVLDICLKLKENGLITRDVHDKTI-------RLTPPLCITKEQLDECTEIIVKT 399
>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase
{Pseudomonas cepacia [TaxId: 292]}
Length = 431
Score = 32.7 bits (73), Expect = 0.095
Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 26/237 (10%)
Query: 240 KKIMVVVEGIYSMEGELC----KLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELL 295
+ E I S G + + + C+ LDEA + G C+
Sbjct: 201 NLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTMFACQRD 259
Query: 296 GVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAI 355
GV DI+ + + G I S + + P A + +
Sbjct: 260 GVTP---DILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVL 316
Query: 356 QVVIGEDGSCRGAQKLARIRENSNFFRSKLQK----------MGFEVLGDNDSPVMPIMV 405
VV + R R+R + +G E++ D +
Sbjct: 317 DVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRT-----KE 371
Query: 406 YNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALEVISR 462
+ +REC+ +++ V P + RI + +++++ L ++ +
Sbjct: 372 PADGLGAKITRECMNLGLSMNIVQLPGMGGVF---RIAPPLTVSEDEIDLGLSLLGQ 425
>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating)
subunit 1 {Thermus thermophilus [TaxId: 274]}
Length = 437
Score = 32.1 bits (72), Expect = 0.15
Identities = 45/356 (12%), Positives = 99/356 (27%), Gaps = 37/356 (10%)
Query: 132 SHSTCSSRVDGGTLALHNELEECVARFVGKPAAIVFGMGYVTNSSILPVLMGKGSLIISD 191
+++ V G L E + +A G + N+S+ ++
Sbjct: 94 AYTPYQPEVSQGVLQATFEYQTMIAELAGLE---------IANASMYDGATALAEGVLLA 144
Query: 192 SLNHNSIVNGARGS--GATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGI 249
+ V + + ++L + G+ +++ VV
Sbjct: 145 LRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPEVGEEVGAVVVQN 204
Query: 250 YSMEGELCKLPEIITICKRYKAYTYLD-EAHSIGAVGKTGRGVCELLGVDTSDVDIMMGT 308
+ G L L A + S+G + G ++ D + + MG
Sbjct: 205 PNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMGF 264
Query: 309 FSKSFGSYGG-----------------YIAGSKELIQYLKYNCPAHLYATSISPPAAEQI 351
FG + G + I L+ A + S
Sbjct: 265 GGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQ 324
Query: 352 ISA-IQVVIGEDGSCRGAQKLA-RIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPA 409
++A + + G +++A + E ++ + L ++ + P
Sbjct: 325 LTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPK 384
Query: 410 KVSSFSRECLKQNVAIVTVGFPATP--LLLARARICISASHTKEDLIEALEVISRI 463
+ R ++ T L L + H +EDL+ E + +
Sbjct: 385 DPEAVRRALAERGFHGATPVPREYGENLAL----FAATELHEEEDLLALREALKEV 436
>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium
[TaxId: 90371]}
Length = 376
Score = 31.9 bits (71), Expect = 0.17
Identities = 34/146 (23%), Positives = 50/146 (34%), Gaps = 23/146 (15%)
Query: 148 HNELEECVARFVGKPAAIVFGMGYVTNSSILPVL-MGKGSLIISDSLNHNSIVNGARGSG 206
+ ELE R G A+ L L +G+G +I+ S+ S +N G
Sbjct: 33 NQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTLNMIVLLG 92
Query: 207 ATIRVFQHN------TPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSMEGELCKLP 260
A + + TP H+E + Q K I+ V G L
Sbjct: 93 ANPVMVDVDRDTLMVTPEHIEAAITPQT-----------KAIIPV-----HYAGAPADLD 136
Query: 261 EIITICKRYKAYTYLDEAHSIGAVGK 286
I + +RY D AH+ G K
Sbjct: 137 AIYALGERYGIPVIEDAAHATGTSYK 162
>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga
maritima [TaxId: 2336]}
Length = 375
Score = 30.8 bits (68), Expect = 0.36
Identities = 38/218 (17%), Positives = 68/218 (31%), Gaps = 19/218 (8%)
Query: 248 GIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMG 307
+ L ++ + K+ Y DE + + T L + D + +
Sbjct: 172 NPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDS--LVYTDEFTSILDVSEGFDRIVYIN 229
Query: 308 TFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRG 367
FSKS G + + + TS A+
Sbjct: 230 GFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALE-------VDN 282
Query: 368 AQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQ-NVAIV 426
+ + +E NF +L+KMG + + + + F L++ VA+V
Sbjct: 283 SYMVQTFKERKNFVVERLKKMGVKFVEPEGA--FYLFFKVRGDDVKFCERLLEEKKVALV 340
Query: 427 TVGFPATPLLLARA-RICISASHTKEDLIEALEVISRI 463
P + L R+ + S E L EAL+ I
Sbjct: 341 ----PGSAFLKPGFVRLSFATS--IERLTEALDRIEDF 372
>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 404
Score = 30.1 bits (67), Expect = 0.59
Identities = 29/210 (13%), Positives = 61/210 (29%), Gaps = 27/210 (12%)
Query: 259 LPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGG 318
L + +C R++ DE + G + V DI+ K+ GG
Sbjct: 211 LMGVRELCTRHQVLFIADEIQT-GLARTGRWLAVDYENVRP---DIV--LLGKALS--GG 262
Query: 319 YIAGSKELI--QYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLARIRE 376
S L + P ++T P ++ A V+ E+ +
Sbjct: 263 LYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAE------NADK 316
Query: 377 NSNFFRSKLQKMGFEVLGDNDSPVMPIMV----YNPAKVSSFSRECLKQNVAIVTVGFPA 432
R++L K+ +V+ + + +
Sbjct: 317 LGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDI 376
Query: 433 TPLLLARARICISASHTKEDLIEALEVISR 462
R +++L E++E+I++
Sbjct: 377 -------IRFAPPLVIKEDELRESIEIINK 399
>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL
{Escherichia coli [TaxId: 562]}
Length = 382
Score = 28.9 bits (63), Expect = 1.5
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 414 FSRECLKQ-NVAIVT-VGFPATPLLLARARICISASHTKEDLIEALEVISRI 463
F + ++ VA + F A P R+C + + L+ A E + ++
Sbjct: 333 FCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKK--ESTLLAAAERLRQL 382
>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma
cruzi [TaxId: 5693]}
Length = 412
Score = 28.3 bits (61), Expect = 2.2
Identities = 20/168 (11%), Positives = 46/168 (27%), Gaps = 16/168 (9%)
Query: 305 MMGTFSKSFGSYG---GYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGE 361
++G +K+ G G++ + + P + + ++
Sbjct: 244 ILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNT 303
Query: 362 DGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDS----PVMPIMVYNPAKVSS-FSR 416
+ + +G + + + Y K F
Sbjct: 304 PQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFE 363
Query: 417 ECLKQ-NVAIVT-VGFPATPLLLARARICISASHTKEDLIEALEVISR 462
+ L++ NV ++ F A R+ + E EA+E I
Sbjct: 364 KLLEEENVQVLPGTIFHAPGFT----RLTTTRP--VEVYREAVERIKA 405
>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus
thermophilus [TaxId: 274]}
Length = 368
Score = 28.2 bits (61), Expect = 2.4
Identities = 28/229 (12%), Positives = 64/229 (27%), Gaps = 15/229 (6%)
Query: 238 PWKKIMVVV--EGIYSMEGELCKLPEIITICKRYKAYTYLDEAHSIGAVGKTGRGVCELL 295
P + +++ + +L I + + + + DE + G+ R + E
Sbjct: 151 PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLRE-- 208
Query: 296 GVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAI 355
+ +G+ K + G + +++ + +
Sbjct: 209 --FAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLA--GMRQWTSFSAPTPLQAGVA 264
Query: 356 QVVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFS 415
+ + R + L+ MG V P +
Sbjct: 265 EALKLARREGFYEALREGYRRRRDLLAGGLRAMGLRVY----VPEGTYFLMAELPGWDAF 320
Query: 416 RECLKQNVAIVT-VGFPATPLLLARARICISASHTKEDLIEALEVISRI 463
R + VA++ F R + +E+L ALE + R+
Sbjct: 321 RLVEEARVALIPASAFYLEDPPKDLFRFAFCKT--EEELHLALERLGRV 367
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas
vaginalis, MGL2 [TaxId: 5722]}
Length = 331
Score = 27.1 bits (59), Expect = 4.7
Identities = 48/307 (15%), Positives = 88/307 (28%), Gaps = 29/307 (9%)
Query: 151 LEECVARFVGKPAAIVF--GMGYVTNSSILPVLMGKGSLIISDSLNHNSIVNGARGSGAT 208
LE +A+ A GMG + +S+ L LI D L G T
Sbjct: 3 LEGKIAKLEHAEACAATASGMGAIA-ASVWTFLKAGDHLISDDCL-----------YGCT 50
Query: 209 IRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKIMVVVEGIYSME-GELCKLPEIITICK 267
+F+H EV +A + +V + ++ + + + +
Sbjct: 51 HALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQAR 110
Query: 268 RYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELI 327
+ K + + + VDI++ + +K + +AG
Sbjct: 111 KQKDILVIVDNTFASPILTN---------PLDLGVDIVVHSATKYINGHTDVVAGLVCSR 161
Query: 328 QYLKYNCPA----HLYATSISPPAAEQIISAIQVVIG-EDGSCRGAQKLARIRENSNFFR 382
+ + + ISP A I + + AQK+A +
Sbjct: 162 ADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVK 221
Query: 383 SKLQKMGFEVLGDNDSPVMPIMVYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARI 442
+ G + M + E K+ + V A L + I
Sbjct: 222 KVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPESLI 281
Query: 443 CISASHT 449
AS T
Sbjct: 282 QHPASMT 288
>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus
aurantiacus [TaxId: 1108]}
Length = 164
Score = 26.6 bits (58), Expect = 5.1
Identities = 27/174 (15%), Positives = 50/174 (28%), Gaps = 28/174 (16%)
Query: 291 VCELLGVDTSDVDIMMGTFSKSFGSYGGYIAGSKELIQYLKYNCPAHLYATSISPPAAEQ 350
+ GV DV M+ GG+ G + + + I+P Q
Sbjct: 13 IAMEAGVSVKDVQAML---------MGGH--GDEMVPLPRFSTISGIPVSEFIAPDRLAQ 61
Query: 351 IISAIQ------VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPIM 404
I+ + V + + GS A A + + K + M + I
Sbjct: 62 IVERTRKGGGEIVNLLKTGSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIY 121
Query: 405 VYNPAKVSSFSRECLKQNVAIVTVGFPATPLLLARARICISASHTKEDLIEALE 458
P + V + + P A + SA + ++ L+
Sbjct: 122 FGVPVILG-------AGGVEKI-LELPLNE--EEMALLNASAKAVRA-TLDTLK 164
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602
[TaxId: 244966]}
Length = 297
Score = 26.8 bits (58), Expect = 5.7
Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 34 DWWSTDNLQGYAPICLGLED---FYIRRLYNRVQDCFGRPLSSAPDAWFDVVERYSNDNN 90
W+ D++Q + ED + +++ L+ A D W ++ +
Sbjct: 57 GQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDSIASLNRAVDYWIEMRSALIGKED 116
Query: 91 KTLKRTNN 98
+ N
Sbjct: 117 TVIINIAN 124
>d1d9ca_ a.26.1.3 (A:) Interferon-gamma {Cow (Bos taurus) [TaxId:
9913]}
Length = 121
Score = 25.4 bits (56), Expect = 7.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 125 IDSLKKYSHSTCSSRVDGGTLALH 148
I++LK+Y +++ GG L
Sbjct: 8 IENLKEYFNASSPDVAKGGPLFSE 31
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent
phosphofructokinase {Lyme disease spirochete (Borrelia
burgdorferi) [TaxId: 139]}
Length = 550
Score = 26.6 bits (58), Expect = 7.8
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 357 VVIGEDGSCRGAQKLARIRENSNFFRSKLQKMGFEVLGDNDSPVMPI 403
++IG D S A LA + + +Q +G D D I
Sbjct: 168 IIIGGDDSNTNAAILAEYFKKNGE---NIQVIGVPKTIDADLRNDHI 211
>d1qjwa_ c.6.1.1 (A:) Cellobiohydrolase II (Cel6) {Trichoderma
reesei, Cel6a [TaxId: 51453]}
Length = 362
Score = 26.4 bits (58), Expect = 8.3
Identities = 21/115 (18%), Positives = 33/115 (28%), Gaps = 7/115 (6%)
Query: 263 ITICKRYKAYTYLDEAHS--IGAVGKTGRGVCELLGV--DTSDVDIMMGTFSKSFGSYGG 318
+T YLD H+ +G V + S + G + + +Y G
Sbjct: 165 VTQLNLPNVAMYLDAGHAGWLGWPANQDPAAQLFANVYKNASSPRALRG-LATNVANYNG 223
Query: 319 YIAGSKELIQYLKYNCPAHLYATSISPPAAEQIISAIQVVIGEDGSCRGAQKLAR 373
+ S LY +I P A S + D G Q +
Sbjct: 224 WNITSPPSYTQGNAVYNEKLYIHAIGPLLANHGWSNAFFIT--DQGRSGKQPTGQ 276
>d1buca1 a.29.3.1 (A:233-383) Butyryl-CoA dehydrogenase, C-domain
{Megasphaera elsdenii [TaxId: 907]}
Length = 151
Score = 25.7 bits (55), Expect = 9.3
Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 10/75 (13%)
Query: 183 GKGSLIISDSLNHNSIVNGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTRRPWKKI 242
GKG I +L+ I A+ G + + + +P K
Sbjct: 1 GKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQ----------RVQFGKPLCKF 50
Query: 243 MVVVEGIYSMEGELC 257
+ + M+ ++
Sbjct: 51 QSISFKLADMKMQIE 65
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.413
Gapped
Lambda K H
0.267 0.0442 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,873,123
Number of extensions: 91016
Number of successful extensions: 316
Number of sequences better than 10.0: 1
Number of HSP's gapped: 298
Number of HSP's successfully gapped: 43
Length of query: 488
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 399
Effective length of database: 1,185,626
Effective search space: 473064774
Effective search space used: 473064774
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.7 bits)