Citrus Sinensis ID: 040324
Local Sequence Feature Prediction
| Prediction and Method | Result |
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Function Prediction
Annotation transfered from Closely Related SWISS-PROT Entries 
| Annotation | Function Description | Confidence Level | Reference Protein |
| Long chain base biosynthesis protein 2a | Serine palmitoyltransferase (SPT). The heterodimer formed with LCB1 constitutes the catalytic core. Involved in the regulation of the programmed cell death (PCD) signaling pathway. Plays an important role during male gametogenesis and embryogenesis. | confident | Q9LSZ9 |
| Long chain base biosynthesis protein 2a | Serine palmitoyltransferase (SPT). The heterodimer formed with LCB1 constitutes the catalytic core. | confident | Q2R3K3 |
| Serine palmitoyltransferase 2 | Serine palmitoyltransferase (SPT). The heterodimer formed with LCB1/SPTLC1 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SSSPTA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC2-SSSPTB complex displays a preference for C18-CoA substrate. | probable | P97363 |
Prediction of Enzyme Commission Number
| EC Number | Description | Confidence Level | |||||||||
| 2.-.-.- | Transferases. | probable | |||||||||
| 2.3.-.- | Acyltransferases. | probable | |||||||||
| 2.3.1.- | Transferring groups other than amino-acyl groups. | probable | |||||||||
| 2.3.1.50 | Serine C-palmitoyltransferase. | probable |
Spatial Structural Prediction
Structural Models Based on Templates
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Template: 3TQX, chain A Confidence level:very confident Coverage over the Query: 66-83,99-469 View the alignment between query and template View the model in PyMOL |
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Template: 1C4K, chain A Confidence level:confident Coverage over the Query: 40-467 View the alignment between query and template View the model in PyMOL |