BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040326
         (285 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P0C042|Y4597_ARATH Uncharacterized protein At4g15970 OS=Arabidopsis thaliana
           GN=At4g15970 PE=2 SV=1
          Length = 367

 Score =  161 bits (408), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 142/258 (55%), Gaps = 16/258 (6%)

Query: 13  LLQLLRRTTMQDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKA 72
           L ++L     +D+TVIIT + + W+ P S  DLFL SF +G+ TK LL HL++  LD +A
Sbjct: 42  LGKILTEAATEDKTVIITTLNKAWSEPNSTFDLFLHSFHVGKGTKPLLRHLVVACLDEEA 101

Query: 73  FQYCKTVHPH-CFYLSNSSTRYTKKKQLSLPQLRNKFWQEV------IELAYSVVFTEVD 125
           +  C  VHPH C+++      +   K    P      W+ +      ++L Y+ +FT   
Sbjct: 102 YSRCSEVHPHRCYFMKTPGIDFAGDKMFMTPDYLKMMWRRIEFLGTLLKLRYNFIFTI-- 159

Query: 126 VMWLRNPILQVDCLKEMTIACDVYSDDLQNISYVKDGGFFYLKSNAITSEYFKYQDMTRI 185
                 P  ++    +  IACD YS D ++I    +GGF ++K+N  T +++ Y  M+R+
Sbjct: 160 ------PFPRLSKEVDFQIACDRYSGDDKDIHNAVNGGFAFVKANQRTIDFYNYWYMSRL 213

Query: 186 LFPDSQNRTLCEETVVNEELFETLSLRVNYMEQDRYGGFCQQNINMDTICTVRANCCDDT 245
            +PD  ++ + ++ +        + L++ +++   +GGFC+ + ++D +CT+ ANCC   
Sbjct: 214 RYPDRHDQDVLDQ-IKGGGYPAKIGLKMRFLDTKYFGGFCEPSRDLDKVCTMHANCCVGL 272

Query: 246 ESKLHDLKLLLEDWRSFT 263
           E+K+ DL+ ++ DW ++ 
Sbjct: 273 ENKIKDLRQVIVDWENYV 290


>sp|Q3E6Y3|Y1869_ARATH Uncharacterized protein At1g28695 OS=Arabidopsis thaliana
           GN=At1g28695 PE=2 SV=1
          Length = 329

 Score =  131 bits (330), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 136/273 (49%), Gaps = 24/273 (8%)

Query: 23  QDRTVIITMVGQ----EWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKT 78
            ++TVIITMV +    E     ++LDLFLESF  GE T  LL+HL++VA+D  A+  C+ 
Sbjct: 56  NNKTVIITMVNKAYVKEVGRGSTMLDLFLESFWEGEGTLPLLDHLMVVAVDQTAYDRCRF 115

Query: 79  VHPHCFYLSN-------SSTRYTKKKQLSLPQLRNKFWQEVIELAYSVVFTEVDVMWLRN 131
              HC+ +             +  K  + +   R +   +V+   Y+V+FT+ DVMWLR+
Sbjct: 116 KRLHCYKMETEDGVDLEGEKVFMSKDFIEMMWRRTRLILDVLRRGYNVIFTDTDVMWLRS 175

Query: 132 PILQVDCLKEMTIACDVYSDDLQNISYVKDGGFFYLKSNAITSEYF-KYQDMTRILFPDS 190
           P+ +++   +M I+ D  +   Q I    + GF++++SN  T   F K+ DM   L    
Sbjct: 176 PLSRLNMSLDMQISVDRINVGGQLI----NTGFYHVRSNNKTISLFQKWYDMR--LNSTG 229

Query: 191 QNRTLCEETVVNEELFETLSLRVNYMEQDRYGGFCQQNINMDTICTVRANCCDDTESKLH 250
                  + +++   F  L L V ++    + GFCQ + +M  + TV ANCC    +K+ 
Sbjct: 230 MKEQDVLKNLLDSGFFNQLGLNVGFLSTTEFSGFCQDSPHMGVVTTVHANCCLHIPAKVF 289

Query: 251 DLKLLLEDWRSFTKKNSLRGSSPPYTWRAHSIC 283
           DL  +L DW+ +      + S     W  H  C
Sbjct: 290 DLTRVLRDWKRY------KASHVNSKWSPHLKC 316


>sp|Q54RP0|AGTA_DICDI UDP-galactose:fucoside alpha-3-galactosyltransferase
           OS=Dictyostelium discoideum GN=agtA PE=1 SV=1
          Length = 648

 Score = 33.5 bits (75), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 9/83 (10%)

Query: 111 EVIELAYSVVFTEVDVMWLRNPILQVDCLKEMTIACDVYSDDLQNISYVKD-----GGFF 165
           +V++  Y+V++T+ D++W R+P +     +++       +DD  ++   +D      GF+
Sbjct: 120 DVLKKGYNVLWTDTDIVWKRDPFIHF--YQDINQENQFTNDDDIDLYVQQDDDDICAGFY 177

Query: 166 YLKSNAITSEYFKYQDMTRILFP 188
           +++SN  T ++   QD    L P
Sbjct: 178 FIRSNQRTIKFI--QDSINFLNP 198


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.135    0.414 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,794,477
Number of Sequences: 539616
Number of extensions: 3928954
Number of successful extensions: 7904
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7898
Number of HSP's gapped (non-prelim): 6
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)