Query 040326
Match_columns 285
No_of_seqs 143 out of 335
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 07:21:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040326.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040326hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF03407 Nucleotid_trans: Nucl 100.0 5.2E-42 1.1E-46 301.6 16.3 193 58-252 1-212 (212)
2 cd02537 GT8_Glycogenin Glycoge 98.2 4.6E-05 1E-09 68.5 13.8 184 32-240 8-206 (240)
3 cd04194 GT8_A4GalT_like A4GalT 97.9 0.00017 3.8E-09 64.6 12.6 197 28-240 3-240 (248)
4 cd00505 Glyco_transf_8 Members 97.9 0.0012 2.6E-08 59.3 17.0 201 27-241 3-239 (246)
5 PF05637 Glyco_transf_34: gala 97.8 2.5E-05 5.4E-10 70.5 4.9 164 73-242 34-232 (239)
6 PLN03182 xyloglucan 6-xylosylt 97.8 0.001 2.2E-08 63.8 15.1 159 74-242 158-359 (429)
7 PLN00176 galactinol synthase 97.7 0.0021 4.7E-08 60.7 16.8 219 24-264 21-292 (333)
8 PLN03181 glycosyltransferase; 97.6 0.0014 3E-08 63.0 13.6 173 23-224 127-327 (453)
9 cd06914 GT8_GNT1 GNT1 is a fun 97.4 0.0021 4.5E-08 59.3 12.1 108 102-222 80-190 (278)
10 PF01501 Glyco_transf_8: Glyco 97.3 0.0021 4.5E-08 56.5 10.7 195 28-241 2-241 (250)
11 cd06431 GT8_LARGE_C LARGE cata 96.7 0.038 8.3E-07 51.0 12.8 153 108-269 89-274 (280)
12 cd06430 GT8_like_2 GT8_like_2 96.6 0.014 3.1E-07 54.5 9.8 148 109-263 90-276 (304)
13 COG1442 RfaJ Lipopolysaccharid 94.5 0.42 9E-06 45.2 10.7 135 28-167 5-162 (325)
14 cd06429 GT8_like_1 GT8_like_1 92.2 0.65 1.4E-05 42.4 7.9 121 100-241 99-235 (257)
15 PRK15171 lipopolysaccharide 1, 91.8 3.7 8E-05 38.8 12.7 201 25-240 25-264 (334)
16 PF03314 DUF273: Protein of un 91.7 0.52 1.1E-05 41.8 6.3 92 99-198 25-123 (222)
17 cd06432 GT8_HUGT1_C_like The C 90.3 1.2 2.6E-05 40.3 7.6 124 108-241 87-239 (248)
18 PLN02829 Probable galacturonos 88.4 1.8 3.9E-05 44.1 7.7 142 109-264 450-626 (639)
19 KOG4748 Subunit of Golgi manno 85.8 17 0.00037 34.8 12.3 179 73-266 132-350 (364)
20 PLN02659 Probable galacturonos 77.0 16 0.00035 36.7 9.1 158 93-266 321-522 (534)
21 cd02515 Glyco_transf_6 Glycosy 76.7 10 0.00022 34.9 7.1 103 15-131 23-139 (271)
22 PLN02910 polygalacturonate 4-a 74.1 24 0.00052 36.3 9.6 159 92-264 451-644 (657)
23 PF11051 Mannosyl_trans3: Mann 72.0 20 0.00044 32.7 8.0 33 117-167 92-124 (271)
24 PLN02870 Probable galacturonos 69.3 17 0.00036 36.7 7.2 138 93-240 320-496 (533)
25 PLN02523 galacturonosyltransfe 65.4 1.6E+02 0.0036 29.9 13.2 144 109-265 370-547 (559)
26 PLN02867 Probable galacturonos 59.7 36 0.00078 34.4 7.5 161 92-264 321-522 (535)
27 PLN02742 Probable galacturonos 59.4 64 0.0014 32.6 9.1 151 102-265 340-523 (534)
28 PLN02718 Probable galacturonos 57.9 47 0.001 34.1 8.0 151 102-265 405-591 (603)
29 cd08579 GDPD_memb_like Glycero 55.8 1.2E+02 0.0026 26.3 9.6 107 8-122 80-196 (220)
30 PF00535 Glycos_transf_2: Glyc 54.4 1E+02 0.0022 23.9 9.3 93 26-135 1-98 (169)
31 PRK05647 purN phosphoribosylgl 49.6 1.3E+02 0.0027 26.3 8.6 80 25-122 3-86 (200)
32 PF03414 Glyco_transf_6: Glyco 47.5 43 0.00093 31.9 5.5 95 24-133 98-205 (337)
33 cd08563 GDPD_TtGDE_like Glycer 45.8 2E+02 0.0044 25.0 10.2 69 9-82 87-155 (230)
34 TIGR00639 PurN phosphoribosylg 44.4 2.1E+02 0.0045 24.7 9.3 71 41-122 12-85 (190)
35 PLN02331 phosphoribosylglycina 44.1 2.2E+02 0.0049 25.0 9.4 72 40-122 10-84 (207)
36 PF02484 Rhabdo_NV: Rhabdoviru 40.0 34 0.00074 26.3 3.0 31 101-131 10-40 (111)
37 cd08555 PI-PLCc_GDPD_SF Cataly 34.5 2.8E+02 0.006 23.2 10.8 97 8-123 57-178 (179)
38 KOG3916 UDP-Gal:glucosylcerami 33.3 37 0.00079 32.5 2.7 36 92-127 191-227 (372)
39 cd08564 GDPD_GsGDE_like Glycer 33.3 3.5E+02 0.0077 24.1 9.3 103 9-120 106-227 (265)
40 PLN02769 Probable galacturonos 30.9 6.3E+02 0.014 26.3 12.9 139 93-240 429-594 (629)
41 cd02071 MM_CoA_mut_B12_BD meth 30.1 2.3E+02 0.0051 22.2 6.7 73 6-86 32-108 (122)
42 cd04185 GT_2_like_b Subfamily 28.6 1.9E+02 0.0041 23.9 6.2 93 27-136 1-100 (202)
43 cd05017 SIS_PGI_PMI_1 The memb 25.4 2.9E+02 0.0064 21.3 6.4 58 23-89 42-99 (119)
44 PF13704 Glyco_tranf_2_4: Glyc 25.4 2.7E+02 0.0059 20.3 8.5 78 41-132 5-88 (97)
45 PRK06027 purU formyltetrahydro 25.2 1.5E+02 0.0032 27.4 5.3 46 40-89 100-146 (286)
46 PF13653 GDPD_2: Glycerophosph 24.6 81 0.0018 19.1 2.3 20 104-123 8-27 (30)
47 PF12804 NTP_transf_3: MobA-li 24.5 1.1E+02 0.0025 24.5 4.0 90 40-146 24-122 (160)
48 cd02511 Beta4Glucosyltransfera 24.3 3E+02 0.0065 23.6 6.9 88 26-136 3-92 (229)
49 COG1216 Predicted glycosyltran 23.4 4.7E+02 0.01 23.8 8.3 83 42-136 17-105 (305)
50 PRK13010 purU formyltetrahydro 21.8 1.9E+02 0.004 26.9 5.2 71 40-122 104-175 (289)
51 PF07905 PucR: Purine cataboli 21.4 3.7E+02 0.0079 21.2 6.3 65 23-89 41-108 (123)
52 COG1438 ArgR Arginine represso 21.3 2.2E+02 0.0047 24.0 5.0 62 14-79 82-145 (150)
53 cd06423 CESA_like CESA_like is 20.9 1.9E+02 0.0041 22.3 4.5 22 115-136 78-99 (180)
54 cd01994 Alpha_ANH_like_IV This 20.8 4.9E+02 0.011 22.4 7.4 55 59-126 88-147 (194)
55 TIGR03679 arCOG00187 arCOG0018 20.8 4.4E+02 0.0096 23.1 7.2 55 59-126 86-145 (218)
56 PF10111 Glyco_tranf_2_2: Glyc 20.2 1.9E+02 0.0041 26.1 4.9 23 115-137 88-110 (281)
No 1
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=100.00 E-value=5.2e-42 Score=301.61 Aligned_cols=193 Identities=26% Similarity=0.511 Sum_probs=164.9
Q ss_pred cccccEEEEEeCHHHHHHHHHhCCcEEEeecC-------cccccccccccchhhHHHHHHHHHHhcceEEEEeccEEEec
Q 040326 58 HLLNHLLIVALDSKAFQYCKTVHPHCFYLSNS-------STRYTKKKQLSLPQLRNKFWQEVIELAYSVVFTEVDVMWLR 130 (285)
Q Consensus 58 ~l~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~-------g~~~~s~~~~~~~~~K~~~i~~vL~lGy~vl~sDvDvVWlr 130 (285)
++++|++|+|+|+++++.|++++++|+..... +..|+++.|..++|.|+.+++++|++||+|+|+|+||||+|
T Consensus 1 ~~~~~~lv~a~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~ 80 (212)
T PF03407_consen 1 HLIDNFLVVALDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLR 80 (212)
T ss_pred CccccEEEEEECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEec
Confidence 46899999999999999999999998887653 12899999999999999999999999999999999999999
Q ss_pred Cccccc-CCCCCeEEecCCCCCCC-CCCCCccceEEEEEEeChhHHHHHHHHHHHHhcCCCCCChhhhhHHhhccccc-c
Q 040326 131 NPILQV-DCLKEMTIACDVYSDDL-QNISYVKDGGFFYLKSNAITSEYFKYQDMTRILFPDSQNRTLCEETVVNEELF-E 207 (285)
Q Consensus 131 nP~~~~-~~~aDi~~~~D~~~~~~-~~~~~~~NsGf~~~R~t~~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v~~~~~-~ 207 (285)
||+++| .+++|+++++|+..+.+ ......+|+||||+|||++|++|+++|.......++.+||.+||+ +.++.. .
T Consensus 81 dp~~~~~~~~~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~--~l~~~~~~ 158 (212)
T PF03407_consen 81 DPLPYFENPDADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNE--LLREQAAR 158 (212)
T ss_pred CcHHhhccCCCceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHH--HHHhcccC
Confidence 999999 88999999999877642 334566799999999999999999999987777778889999995 443433 2
Q ss_pred CCCeEEEEeccCCCC-C---ccc-ccC-C---CCceEEEeccccCChhhhHHHH
Q 040326 208 TLSLRVNYMEQDRYG-G---FCQ-QNI-N---MDTICTVRANCCDDTESKLHDL 252 (285)
Q Consensus 208 ~~gl~v~~Ld~~~F~-g---~~~-~~~-d---~~~~~~vHan~~~G~~~K~~~l 252 (285)
..++++++||+..|| | |++ ... . ..+|++||+||+.|.++|++||
T Consensus 159 ~~~~~~~~L~~~~f~~g~~~f~~~~~~~~~~~~~~p~~vH~n~~~g~~~K~~~~ 212 (212)
T PF03407_consen 159 YGGLRVRFLPPSLFPNGHGYFCQSRDWAWVPTKNKPYIVHANCCDGKEGKRQRF 212 (212)
T ss_pred CcCcEEEEeCHHHeeccccceeecchhhhhccccccceEEEcCCCChHhHHhhC
Confidence 279999999999997 2 455 111 1 2479999999999999999886
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=98.18 E-value=4.6e-05 Score=68.52 Aligned_cols=184 Identities=15% Similarity=0.037 Sum_probs=105.5
Q ss_pred eCccccCCcchHHHHHHHhccccccccc-cccEEEEE---eCHHHHHHHHHhCCcEEEeecCcc----cccccccccchh
Q 040326 32 VGQEWASPGSVLDLFLESFCIGEETKHL-LNHLLIVA---LDSKAFQYCKTVHPHCFYLSNSST----RYTKKKQLSLPQ 103 (285)
Q Consensus 32 ~n~~~~~~~s~l~~fl~s~r~g~~t~~l-~~~~lVvA---~D~~~~~~c~~~~~~c~~~~~~g~----~~~s~~~~~~~~ 103 (285)
+|.+|+. -+..-+.|++. .. -.+++|+. +.++..+.+++.+..+.....-.. ......+...+|
T Consensus 8 ~~~~Y~~---~a~vl~~SL~~-----~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 8 TNDDYLP---GALVLGYSLRK-----VGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred cChhHHH---HHHHHHHHHHh-----cCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 5667877 56667778762 21 12444443 345666778888766554432111 112345566778
Q ss_pred hHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCCCCeEEecCCCCCCCCCCCCccceEEEEEEeChhHHHHHHHHHH
Q 040326 104 LRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCLKEMTIACDVYSDDLQNISYVKDGGFFYLKSNAITSEYFKYQDM 182 (285)
Q Consensus 104 ~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~aDi~~~~D~~~~~~~~~~~~~NsGf~~~R~t~~t~~~~~~w~~ 182 (285)
.|..+.. + .+|+ ||+.|+|++.++|+-+.|..+..+....|.. ....+|+|||.++++....+-+.+...
T Consensus 80 ~kl~~~~-l--~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~------~~~~fNsGv~l~~~~~~~~~~~~~~~~ 150 (240)
T cd02537 80 TKLRLWN-L--TEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCG------WPDLFNSGVFVLKPSEETFNDLLDALQ 150 (240)
T ss_pred HHHHhcc-c--cccceEEEEeCCeeEccCHHHHhCCCCceeeecccC------ccccccceEEEEcCCHHHHHHHHHHHh
Confidence 8866655 2 2564 9999999999999988886522233333321 135799999999998655444433333
Q ss_pred HHhcCCCCCChhhhhHHhhccccccCCCeEEEEeccCC-CC-Ccccc----cCCCCceEEEecc
Q 040326 183 TRILFPDSQNRTLCEETVVNEELFETLSLRVNYMEQDR-YG-GFCQQ----NINMDTICTVRAN 240 (285)
Q Consensus 183 ~~~~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F~-g~~~~----~~d~~~~~~vHan 240 (285)
.... ....||.++|. +-++. + .+..||..+ +. +.... ......+.++|-.
T Consensus 151 ~~~~-~~~~DQdiLN~--~~~~~----~-~~~~l~~~yN~~~~~~~~~~~~~~~~~~~~iiHf~ 206 (240)
T cd02537 151 DTPS-FDGGDQGLLNS--YFSDR----G-IWKRLPFTYNALKPLRYLHPEALWFGDEIKVVHFI 206 (240)
T ss_pred ccCC-CCCCCHHHHHH--HHcCC----C-CEeECCcceeeehhhhccCchhhcccCCcEEEEEe
Confidence 1111 24589999994 42211 1 466676653 21 22211 1223467888854
No 3
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=97.93 E-value=0.00017 Score=64.59 Aligned_cols=197 Identities=10% Similarity=0.115 Sum_probs=109.3
Q ss_pred EEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeC--HHHHHHHHHh----CCcEEEeecCc--c-cc--ccc
Q 040326 28 IITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALD--SKAFQYCKTV----HPHCFYLSNSS--T-RY--TKK 96 (285)
Q Consensus 28 ilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D--~~~~~~c~~~----~~~c~~~~~~g--~-~~--~s~ 96 (285)
|+.++|..|.. -+..-+.|+..- .+...-++.|++.| ++..+.+++. +..+-....+. . .. .+.
T Consensus 3 I~~~~d~~y~~---~~~~~l~Sl~~~--~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~~~~ 77 (248)
T cd04194 3 IVFAIDDNYAP---YLAVTIKSILAN--NSKRDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFFPATTD 77 (248)
T ss_pred EEEEecHhhHH---HHHHHHHHHHhc--CCCCceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcCCcccc
Confidence 67888999988 677777787511 11112355566654 6667777665 22221111110 0 11 234
Q ss_pred ccccchhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCC---CCeEEecCCCCCC---------CCCCCCccceE
Q 040326 97 KQLSLPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCL---KEMTIACDVYSDD---------LQNISYVKDGG 163 (285)
Q Consensus 97 ~~~~~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~---aDi~~~~D~~~~~---------~~~~~~~~NsG 163 (285)
.|..++..|..+ -.++. +|+ ||+.|+|++.++|+-+.+..+ .-+.+..|..... .......+|+|
T Consensus 78 ~~~~~~y~rl~l-~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsG 155 (248)
T cd04194 78 HISYATYYRLLI-PDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSG 155 (248)
T ss_pred cccHHHHHHHHH-HHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeec
Confidence 454555555544 34444 676 999999999999998877643 2233344543210 11234579999
Q ss_pred EEEEEeChh-HHHHHHHHHHHHhcCC---CCCChhhhhHHhhccccccCCCeEEEEeccCC-C-CCccccc---------
Q 040326 164 FFYLKSNAI-TSEYFKYQDMTRILFP---DSQNRTLCEETVVNEELFETLSLRVNYMEQDR-Y-GGFCQQN--------- 228 (285)
Q Consensus 164 f~~~R~t~~-t~~~~~~w~~~~~~~~---~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F-~g~~~~~--------- 228 (285)
+|.+..+.- ...+.+.+.+.....+ ...||.++| .+-.+ ++..||..+ + ++.+...
T Consensus 156 v~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN--~~~~~-------~~~~L~~~~N~~~~~~~~~~~~~~~~~~ 226 (248)
T cd04194 156 VLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILN--AVLKD-------KILYLPPRYNFQTGFYYLLKKKSKEEQE 226 (248)
T ss_pred chheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHH--HHHhC-------CeEEcCcccccchhHhHHhhccchhHHH
Confidence 999987642 2233444433222222 458999999 44222 267777553 2 2322221
Q ss_pred --CCCCceEEEecc
Q 040326 229 --INMDTICTVRAN 240 (285)
Q Consensus 229 --~d~~~~~~vHan 240 (285)
.....+.++|-+
T Consensus 227 ~~~~~~~~~iiHf~ 240 (248)
T cd04194 227 LEEARKNPVIIHYT 240 (248)
T ss_pred HHHHhcCCEEEEeC
Confidence 224568889976
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=97.87 E-value=0.0012 Score=59.29 Aligned_cols=201 Identities=9% Similarity=0.066 Sum_probs=109.2
Q ss_pred EEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeC--HHHHHHHHHhC----CcE-E-EeecCcc-ccc--c
Q 040326 27 VIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALD--SKAFQYCKTVH----PHC-F-YLSNSST-RYT--K 95 (285)
Q Consensus 27 Vilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D--~~~~~~c~~~~----~~c-~-~~~~~g~-~~~--s 95 (285)
|++.+++.+|+. .+.--+.|+.. .+.. .-++.|++.| ++..+.+++.. ..+ | ....... ... .
T Consensus 3 i~~~a~d~~y~~---~~~v~i~Sl~~--~~~~-~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 76 (246)
T cd00505 3 IVIVATGDEYLR---GAIVLMKSVLR--HRTK-PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHLK 76 (246)
T ss_pred EEEEecCcchhH---HHHHHHHHHHH--hCCC-CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcchhhhhc
Confidence 455566668888 66666777651 1111 3455566543 34444554431 111 1 1111111 111 1
Q ss_pred cccccchhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCC---CCeEEecCCCCC---C-------CCCCCCccc
Q 040326 96 KKQLSLPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCL---KEMTIACDVYSD---D-------LQNISYVKD 161 (285)
Q Consensus 96 ~~~~~~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~---aDi~~~~D~~~~---~-------~~~~~~~~N 161 (285)
+.+...+..|.. +-++|. .++ ||+.|+|++.++|.-+.+.-+ .-+.+..|.... . .......+|
T Consensus 77 ~~~~~~~y~RL~-i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfN 154 (246)
T cd00505 77 RPIKIVTLTKLH-LPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFN 154 (246)
T ss_pred CccccceeHHHH-HHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCcee
Confidence 334455556654 445566 785 999999999999998887533 223333343210 0 011245799
Q ss_pred eEEEEEEeChhH-HHHHHHHHHHHh---cCCCCCChhhhhHHhhccccccCCCeEEEEeccCC-CC-Cccccc-----CC
Q 040326 162 GGFFYLKSNAIT-SEYFKYQDMTRI---LFPDSQNRTLCEETVVNEELFETLSLRVNYMEQDR-YG-GFCQQN-----IN 230 (285)
Q Consensus 162 sGf~~~R~t~~t-~~~~~~w~~~~~---~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F~-g~~~~~-----~d 230 (285)
+|+|.+..+.-. ..+++....... ......||+++| .+-. ..+..+..||... +. +.+... ..
T Consensus 155 sGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN--~~~~----~~~~~i~~L~~~wN~~~~~~~~~~~~~~~~ 228 (246)
T cd00505 155 SGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLN--TFFK----QVPFIVKSLPCIWNVRLTGCYRSLNCFKAF 228 (246)
T ss_pred eeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHH--HHHh----cCCCeEEECCCeeeEEecCccccccchhhh
Confidence 999999999774 555554433211 123568999999 4422 2235677777653 21 222221 23
Q ss_pred CCceEEEeccc
Q 040326 231 MDTICTVRANC 241 (285)
Q Consensus 231 ~~~~~~vHan~ 241 (285)
..++.++|-+.
T Consensus 229 ~~~~~iiHy~g 239 (246)
T cd00505 229 VKNAKVIHFNG 239 (246)
T ss_pred cCCCEEEEeCC
Confidence 55789999664
No 5
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=97.81 E-value=2.5e-05 Score=70.47 Aligned_cols=164 Identities=8% Similarity=0.082 Sum_probs=33.8
Q ss_pred HHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhcc--e-EEEEeccEEEecCcccc---cC-CCC-----
Q 040326 73 FQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELAY--S-VVFTEVDVMWLRNPILQ---VD-CLK----- 140 (285)
Q Consensus 73 ~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lGy--~-vl~sDvDvVWlrnP~~~---~~-~~a----- 140 (285)
.++|+..|-.++...... +.. .-...+|.|+-++++.+..=- + |++.|.|++...-=++. +. +..
T Consensus 34 ~~Ya~~HgY~~~~~~~~~--~~~-~~~~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~ 110 (239)
T PF05637_consen 34 VDYARRHGYDLYYRNIQE--YDD-PERPGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLL 110 (239)
T ss_dssp HHHHHHHT-EEEEE-S----S---SHHHHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE---------------------
T ss_pred HHHHHhcCCEEEEEChHH--cCC-CCCChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEeccccccccccccccccccc
Confidence 578999998887754431 111 223446999999999997532 2 89999999875422331 11 100
Q ss_pred --CeE-EecCCCCC-------C-----CCCCCCccceEEEEEEeChhHHHHHHHHHHHHhcCC-----CCCChhhhhHHh
Q 040326 141 --EMT-IACDVYSD-------D-----LQNISYVKDGGFFYLKSNAITSEYFKYQDMTRILFP-----DSQNRTLCEETV 200 (285)
Q Consensus 141 --Di~-~~~D~~~~-------~-----~~~~~~~~NsGf~~~R~t~~t~~~~~~w~~~~~~~~-----~~~DQ~~fn~~~ 200 (285)
|.. +.-+...+ + .......+|+|+|++|.++-|+.|++.|..-+.... ...||.+|.+.+
T Consensus 111 ~r~~~~~p~~~~~~~~~~~~~~~~~li~t~d~~gLNtGsFliRns~ws~~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll 190 (239)
T PF05637_consen 111 LRDVPIVPPDSIIKTYSVIDGNDIHLIITQDWNGLNTGSFLIRNSPWSRDFLDAWADPLYRNYDWDQLEFDEQSALEHLL 190 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 100 01111110 0 112367799999999999999999999976443222 246999999522
Q ss_pred hccccccCCCeEEEEeccCCCCCccccc---CCCCceEEEecccc
Q 040326 201 VNEELFETLSLRVNYMEQDRYGGFCQQN---INMDTICTVRANCC 242 (285)
Q Consensus 201 v~~~~~~~~gl~v~~Ld~~~F~g~~~~~---~d~~~~~~vHan~~ 242 (285)
..++.. .-++.++|+..|-.+.... ...+...++|.--|
T Consensus 191 ~~~~~~---~~~~~~vpq~~~nsy~~~~~~~~~~~GDfvvhfaGC 232 (239)
T PF05637_consen 191 QWHPEI---LSKVALVPQRWFNSYPEDECNYQYKEGDFVVHFAGC 232 (239)
T ss_dssp ---------------------------------------------
T ss_pred cccccc---cccccccccccccccccccccccccccccccccccc
Confidence 223322 2345677776665322221 12233467776555
No 6
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=97.76 E-value=0.001 Score=63.78 Aligned_cols=159 Identities=8% Similarity=0.017 Sum_probs=98.5
Q ss_pred HHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhcce---EEEEeccEEEecCccc----ccCCCCCeEEec
Q 040326 74 QYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELAYS---VVFTEVDVMWLRNPIL----QVDCLKEMTIAC 146 (285)
Q Consensus 74 ~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lGy~---vl~sDvDvVWlrnP~~----~~~~~aDi~~~~ 146 (285)
++|+..|..+|+. .. .+. +. ..-.|.|+-+++.++...-+ +.+.|.|.+.+--+++ .+ .+.++++-
T Consensus 158 dYAr~HGY~~fyn-~~--~ld-~~-~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery-~~~NlVih- 230 (429)
T PLN03182 158 DYCRLHGIEIFYN-MA--HLD-AE-MAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKY-EGYNLVIH- 230 (429)
T ss_pred HHHHHhCCEEEee-hh--hcC-cC-CCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHc-CCcCeeec-
Confidence 6788888777762 21 111 11 23569999999999987433 7889999998653333 22 12223321
Q ss_pred CCCCCC--CCCCCCccceEEEEEEeChhHHHHHHHHHHHHh-----------------c--CCCCCChhhhhHHhhcccc
Q 040326 147 DVYSDD--LQNISYVKDGGFFYLKSNAITSEYFKYQDMTRI-----------------L--FPDSQNRTLCEETVVNEEL 205 (285)
Q Consensus 147 D~~~~~--~~~~~~~~NsGf~~~R~t~~t~~~~~~w~~~~~-----------------~--~~~~~DQ~~fn~~~v~~~~ 205 (285)
++... ...-...+|+|.|++|.++-+++|++.|..+.. . .+...||.++- .++...
T Consensus 231 -g~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlv--yLl~~~ 307 (429)
T PLN03182 231 -GWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALV--YLLLTQ 307 (429)
T ss_pred -cchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHH--HHHHhc
Confidence 11111 011245699999999999999999999976432 1 22468999998 443222
Q ss_pred ccCCCeEEEEeccCCCCCccc--------------cc-CCCCceEEEecccc
Q 040326 206 FETLSLRVNYMEQDRYGGFCQ--------------QN-INMDTICTVRANCC 242 (285)
Q Consensus 206 ~~~~gl~v~~Ld~~~F~g~~~--------------~~-~d~~~~~~vHan~~ 242 (285)
-...+-++.+-+..+|-|+-. ++ -|.+.|++.|-.-|
T Consensus 308 ~~~w~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~Gc 359 (429)
T PLN03182 308 RERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGC 359 (429)
T ss_pred chhhccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeeccc
Confidence 233456777777777877531 11 33456888887654
No 7
>PLN00176 galactinol synthase
Probab=97.73 E-value=0.0021 Score=60.68 Aligned_cols=219 Identities=11% Similarity=0.121 Sum_probs=119.1
Q ss_pred CCeEEEE--EeCccccCCcchHHHHHHHhccccccccc-cccEEEEEeCH---HHHHHHHHhCCcEEEeec----Ccc-c
Q 040326 24 DRTVIIT--MVGQEWASPGSVLDLFLESFCIGEETKHL-LNHLLIVALDS---KAFQYCKTVHPHCFYLSN----SST-R 92 (285)
Q Consensus 24 d~tVilt--~~n~~~~~~~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~D~---~~~~~c~~~~~~c~~~~~----~g~-~ 92 (285)
.+..-|| ++|..|.. =+.....|+| +.. ...++|+..++ +..+.+++.|......+. +.. .
T Consensus 21 ~~~AyVT~L~~n~~Y~~---Ga~vL~~SLr-----~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~ 92 (333)
T PLN00176 21 AKRAYVTFLAGNGDYVK---GVVGLAKGLR-----KVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQ 92 (333)
T ss_pred CceEEEEEEecCcchHH---HHHHHHHHHH-----HhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccc
Confidence 4566666 45778887 5566678887 333 34555555554 445666666644332211 111 2
Q ss_pred ccccccccchhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCCCC-eEEecCCCCCC------------------
Q 040326 93 YTKKKQLSLPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCLKE-MTIACDVYSDD------------------ 152 (285)
Q Consensus 93 ~~s~~~~~~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~aD-i~~~~D~~~~~------------------ 152 (285)
+. ..+..+.+.|..+...+ .|+ ||+.|+|++-++|--+.|.-..+ +....|++...
T Consensus 93 ~~-~~~~~i~~tKl~iw~l~---~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~ 168 (333)
T PLN00176 93 FA-MAYYVINYSKLRIWEFV---EYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPD 168 (333)
T ss_pred cc-cchhhhhhhhhhhcccc---ccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchh
Confidence 22 23556677788765532 464 99999999999998777753222 33333443210
Q ss_pred ----CCC----CCCccceEEEEEEeChhHHHHHHHHHHHHhcCCCCCChhhhhHHhhccccccCCCeEEEEeccCC-CC-
Q 040326 153 ----LQN----ISYVKDGGFFYLKSNAITSEYFKYQDMTRILFPDSQNRTLCEETVVNEELFETLSLRVNYMEQDR-YG- 222 (285)
Q Consensus 153 ----~~~----~~~~~NsGf~~~R~t~~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F~- 222 (285)
|.. ....+|+|+|.+.|+..+-+-+-+....... -...||++||. +-++ ++..||..+ +.
T Consensus 169 ~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~-~~f~DQD~LN~--~F~~-------~~~~Lp~~YN~~~ 238 (333)
T PLN00176 169 KVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKITPP-TPFAEQDFLNM--FFRD-------IYKPIPPVYNLVL 238 (333)
T ss_pred hccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCC-CCCCCHHHHHH--HHcC-------cEEECCchhcCch
Confidence 000 1347999999999997774433333321111 13479999994 4222 345565433 11
Q ss_pred Ccc--cc-cCCCCceEEEeccc------c-CC--hhhhHHHHHHHHHHHHhhhc
Q 040326 223 GFC--QQ-NINMDTICTVRANC------C-DD--TESKLHDLKLLLEDWRSFTK 264 (285)
Q Consensus 223 g~~--~~-~~d~~~~~~vHan~------~-~G--~~~K~~~lr~~l~dw~~~~~ 264 (285)
... ++ ..+..++.+||-.. . .| ..-.+.+.+.+++-|=....
T Consensus 239 ~~~~~~~~~~~~~~vkIIHY~~~~~KPW~~~~~~~~~~~~~~~~~~~~Ww~~~~ 292 (333)
T PLN00176 239 AMLWRHPENVELDKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWWDIYN 292 (333)
T ss_pred hhhhhChhhcccCCcEEEEeeCCCCCCCCCCCcccCCChHHHHHHHHHHHHHhc
Confidence 111 11 11245677888642 1 11 11245677777766544433
No 8
>PLN03181 glycosyltransferase; Provisional
Probab=97.61 E-value=0.0014 Score=63.04 Aligned_cols=173 Identities=11% Similarity=0.179 Sum_probs=99.8
Q ss_pred CCCeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCCcEEEeecCcccccccccccch
Q 040326 23 QDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLP 102 (285)
Q Consensus 23 ~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~ 102 (285)
+.+.||||..+-.=-+ +..-+.+|..+. +.=.++|+..|..+|..... ..+ -....
T Consensus 127 ~prVViVT~Sdp~~C~-~~~gD~~Llrii------------------kNR~dYArrHGY~lf~~~a~----Ld~-~~p~~ 182 (453)
T PLN03181 127 EERVVMVTGSQPTPCK-NPIGDHLLLRFF------------------KNKVDYCRIHGYDIFYNNAL----LHP-KMNSY 182 (453)
T ss_pred CCCEEEEECCCCCCCC-CcccHHHHHHHH------------------HHHHHHHHHhCCcEEEeccc----cCc-cCchh
Confidence 6789999998721000 112334443322 01136788888887766542 111 13568
Q ss_pred hhHHHHHHHHHHhcce---EEEEeccEEEecCccccc--CC--CCCeEEecCCCCCC--CCCCCCccceEEEEEEeChhH
Q 040326 103 QLRNKFWQEVIELAYS---VVFTEVDVMWLRNPILQV--DC--LKEMTIACDVYSDD--LQNISYVKDGGFFYLKSNAIT 173 (285)
Q Consensus 103 ~~K~~~i~~vL~lGy~---vl~sDvDvVWlrnP~~~~--~~--~aDi~~~~D~~~~~--~~~~~~~~NsGf~~~R~t~~t 173 (285)
|.|+-+++..+..=-+ |.+.|.|.+.. ||-.-+ +. +..+++- ++... ...--..+|+|.|++|.++-+
T Consensus 183 WaKipalRaAM~a~PeAEWfWWLDsDALIM-Np~~sLPl~ry~~~NLvvh--g~p~~vy~~qdw~GlN~GsFLIRNcqWS 259 (453)
T PLN03181 183 WAKLPVVRAAMLAHPEAEWIWWVDSDAVFT-DMDFKLPLHRYRDHNLVVH--GWPKLIYEKRSWTALNAGVFLIRNCQWS 259 (453)
T ss_pred hhHHHHHHHHHHHCCCceEEEEecCCceee-cCCCCCCHhhcCCcccccc--CCcccccccccccccceeeeEEecCHHH
Confidence 9999999998776322 88999999876 552211 11 1122221 11100 011246799999999999999
Q ss_pred HHHHHHHHHHH--------------h-----cCCCCCChhhhhHHhhccccccCCCeEEEEeccCCCCCc
Q 040326 174 SEYFKYQDMTR--------------I-----LFPDSQNRTLCEETVVNEELFETLSLRVNYMEQDRYGGF 224 (285)
Q Consensus 174 ~~~~~~w~~~~--------------~-----~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~F~g~ 224 (285)
.+|++.|..+- . ..+...||.++--.++.+ -.+-+-+|.+=...+|-|+
T Consensus 260 l~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~--~~~w~~k~ylE~~yy~~Gy 327 (453)
T PLN03181 260 LDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKH--KEKWGDKIYLEGEYYFEGY 327 (453)
T ss_pred HHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhc--cchhccceeeecceeeeee
Confidence 99999997621 0 133568999988422222 1223445554455555553
No 9
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=97.44 E-value=0.0021 Score=59.35 Aligned_cols=108 Identities=9% Similarity=0.019 Sum_probs=67.7
Q ss_pred hhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCC-CCeEEecCCCCCCCCCCCCccceEEEEEEeChhHHHHHHH
Q 040326 102 PQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCL-KEMTIACDVYSDDLQNISYVKDGGFFYLKSNAITSEYFKY 179 (285)
Q Consensus 102 ~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~-aDi~~~~D~~~~~~~~~~~~~NsGf~~~R~t~~t~~~~~~ 179 (285)
++.|..+... ..|+ ||+.|+|++-++|.-+.|.-. ..-+.+-+ ....+|||+|.+.|+..+-.=+.+
T Consensus 80 ~~tKl~~~~l---~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~--------~~~~FNSGvmvi~ps~~~~~~l~~ 148 (278)
T cd06914 80 SLTKLRAFNQ---TEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPR--------AYWKFASHLMVIKPSKEAFKELMT 148 (278)
T ss_pred HHHHHHhccc---cceeeEEEecCChhhhcChHHHhcCCcccceeeec--------CcceecceeEEEeCCHHHHHHHHH
Confidence 4677776655 3575 999999999999887777533 11111111 123799999999999877443333
Q ss_pred HHHHHhc-CCCCCChhhhhHHhhccccccCCCeEEEEeccCCCC
Q 040326 180 QDMTRIL-FPDSQNRTLCEETVVNEELFETLSLRVNYMEQDRYG 222 (285)
Q Consensus 180 w~~~~~~-~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~F~ 222 (285)
-...... ..+..||.++|. +-.+.......++.+||...+.
T Consensus 149 ~~~~~~~~~~~~~DQdiLN~--~~~~~~~~~~~~~~~Lp~~~y~ 190 (278)
T cd06914 149 EILPAYLNKKNEYDMDLINE--EFYNSKQLFKPSVLVLPHRQYG 190 (278)
T ss_pred HHHHhcccCCCCCChHHHHH--HHhCCccccCcceEEcCccccc
Confidence 3322222 335689999994 4333322244567788876544
No 10
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=97.35 E-value=0.0021 Score=56.50 Aligned_cols=195 Identities=9% Similarity=0.033 Sum_probs=105.1
Q ss_pred EEEEeCccccCCcchHHHHHHHhcccccccccc--ccE--EEEE--eCHHHHHHHHHhCCc-----EEEeecC-------
Q 040326 28 IITMVGQEWASPGSVLDLFLESFCIGEETKHLL--NHL--LIVA--LDSKAFQYCKTVHPH-----CFYLSNS------- 89 (285)
Q Consensus 28 ilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~--~~~--lVvA--~D~~~~~~c~~~~~~-----c~~~~~~------- 89 (285)
|+.++|..|.. -+..-+.|++ +..- .++ .|+. ..++..+.+++.... .......
T Consensus 2 i~~~~d~~y~~---~~~v~i~Sl~-----~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (250)
T PF01501_consen 2 IVLACDDNYLE---GAAVLIKSLL-----KNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQ 73 (250)
T ss_dssp EEEECSGGGHH---HHHHHHHHHH-----HTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--T
T ss_pred EEEEeCHHHHH---HHHHHHHHHH-----HhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhh
Confidence 67788999988 6777778876 2221 333 3333 234455555555422 1111110
Q ss_pred cccccccccccchhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCC--C-CeEEecCC-----CCC-------CC
Q 040326 90 STRYTKKKQLSLPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCL--K-EMTIACDV-----YSD-------DL 153 (285)
Q Consensus 90 g~~~~s~~~~~~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~--a-Di~~~~D~-----~~~-------~~ 153 (285)
........+..++..|..+...+ ..|+ ||+.|+|++.++|+-+.|.-+ . -+....|. ... ..
T Consensus 74 ~~~~~~~~~~~~~~~rl~i~~ll--~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 151 (250)
T PF01501_consen 74 FNSPSKRHFSPATFARLFIPDLL--PDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQ 151 (250)
T ss_dssp TS-HCCTCGGGGGGGGGGHHHHS--TTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECE
T ss_pred hcccccccccHHHHHHhhhHHHH--hhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhccc
Confidence 11233455667778888555544 5666 999999999999998877522 2 23333340 000 01
Q ss_pred CCCCCccceEEEEEEeChhHHHHHHHH-HHHHhcCC---CCCChhhhhHHhhccccccCCCeEEEEeccCCCC--Ccc--
Q 040326 154 QNISYVKDGGFFYLKSNAITSEYFKYQ-DMTRILFP---DSQNRTLCEETVVNEELFETLSLRVNYMEQDRYG--GFC-- 225 (285)
Q Consensus 154 ~~~~~~~NsGf~~~R~t~~t~~~~~~w-~~~~~~~~---~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~F~--g~~-- 225 (285)
......+|+|++.+.++.-...-+... ........ ...||.++| .+-. -++..||..+-- +..
T Consensus 152 ~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln--~~~~-------~~~~~L~~~~N~~~~~~~~ 222 (250)
T PF01501_consen 152 PGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILN--IVFY-------GNIKPLPCRYNCQPSWYNQ 222 (250)
T ss_dssp STTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHH--HHHT-------TGEEEEEGGGSEEHHHHHH
T ss_pred CcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHh--hhcc-------ceeEEECchhccccccccc
Confidence 134788999999999987765444333 33222222 368999999 4422 346677765321 222
Q ss_pred ---cccCCCCceEEEeccc
Q 040326 226 ---QQNINMDTICTVRANC 241 (285)
Q Consensus 226 ---~~~~d~~~~~~vHan~ 241 (285)
.......++.++|-+-
T Consensus 223 ~~~~~~~~~~~~~iiHy~g 241 (250)
T PF01501_consen 223 SDDYFNPILEDAKIIHYSG 241 (250)
T ss_dssp THHHHHHHGCC-SEEE--S
T ss_pred cchhhHhhcCCeEEEEeCC
Confidence 1123345677888654
No 11
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=96.67 E-value=0.038 Score=51.02 Aligned_cols=153 Identities=8% Similarity=0.050 Sum_probs=78.6
Q ss_pred HHHHHHHhcc-eEEEEeccEEEecCcccccCC-----CCCeEEec-CC---CCCC------C-CCCCCccceEEEEEEeC
Q 040326 108 FWQEVIELAY-SVVFTEVDVMWLRNPILQVDC-----LKEMTIAC-DV---YSDD------L-QNISYVKDGGFFYLKSN 170 (285)
Q Consensus 108 ~i~~vL~lGy-~vl~sDvDvVWlrnP~~~~~~-----~aDi~~~~-D~---~~~~------~-~~~~~~~NsGf~~~R~t 170 (285)
++-++|..-+ .||+.|+|+|...|.-+.+.- +.-+.... |. +... + ......+|+|+|++--.
T Consensus 89 ~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVmlinL~ 168 (280)
T cd06431 89 VLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVILLDLD 168 (280)
T ss_pred HHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeeeeeeHH
Confidence 3555665445 599999999999999887643 11222222 21 1110 1 11234799999998654
Q ss_pred h-hHHHHHHHHHHH---Hh---cCCCCCChhhhhHHhhccccccCCCeEEEEeccCC-CC-Cccc-c---cCCCCceEEE
Q 040326 171 A-ITSEYFKYQDMT---RI---LFPDSQNRTLCEETVVNEELFETLSLRVNYMEQDR-YG-GFCQ-Q---NINMDTICTV 237 (285)
Q Consensus 171 ~-~t~~~~~~w~~~---~~---~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F~-g~~~-~---~~d~~~~~~v 237 (285)
. |-..+.+.|... .. ......||+++| .+.++.. -.+..||... +. +... . -.....|.++
T Consensus 169 ~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN--~v~~~~~----~~~~~L~~~wN~~~~~~~~~~~~~~~~~~p~II 242 (280)
T cd06431 169 KLRKMKWESMWRLTAERELMSMLSTSLADQDIFN--AVIKQNP----FLVYQLPCAWNVQLSDHTRSEQCYRDVSDLKVI 242 (280)
T ss_pred HHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHH--HHHcCCc----ceeEECCCccccccCccchHhHhhcCcCCCEEE
Confidence 2 112233333221 11 123468999999 5543210 0134455432 21 1110 0 0123568999
Q ss_pred eccccCC--hhh-hHHHHHHHHHHHHhhhccCCCC
Q 040326 238 RANCCDD--TES-KLHDLKLLLEDWRSFTKKNSLR 269 (285)
Q Consensus 238 Han~~~G--~~~-K~~~lr~~l~dw~~~~~~~~~~ 269 (285)
|-+...- ..+ +.+.+|+ .|.+|..++++.
T Consensus 243 Hf~g~~KPW~~~~~~~~~~~---~~~~~~~~~~~~ 274 (280)
T cd06431 243 HWNSPKKLRVKNKHVEFFRN---LYLTFLEYDGNL 274 (280)
T ss_pred EeCCCCCCCCcCCCChHHHH---HHHHHHhcCchh
Confidence 9874311 123 3377774 466676655443
No 12
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=96.64 E-value=0.014 Score=54.47 Aligned_cols=148 Identities=9% Similarity=0.098 Sum_probs=89.5
Q ss_pred HHHHHHhcc-eEEEEeccEEEecCcccccCC--C-CC--eEEec-CCCC----------CCCCCCCCccceEEEEEEeCh
Q 040326 109 WQEVIELAY-SVVFTEVDVMWLRNPILQVDC--L-KE--MTIAC-DVYS----------DDLQNISYVKDGGFFYLKSNA 171 (285)
Q Consensus 109 i~~vL~lGy-~vl~sDvDvVWlrnP~~~~~~--~-aD--i~~~~-D~~~----------~~~~~~~~~~NsGf~~~R~t~ 171 (285)
+-++|. -+ .||+.|+||+.++|.-+.+.- + .+ +.... |... ..+......+|||+|++-=+.
T Consensus 90 ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVmLmNL~~ 168 (304)
T cd06430 90 LPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVMLMNLTR 168 (304)
T ss_pred HHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccceeeeeHHH
Confidence 445555 44 699999999999988776543 1 11 22221 2111 112222235999999986543
Q ss_pred hH------------HHHHHHHHHHHhcCC---CCCChhhhhHHhhccccccCCCeEEEEeccCC-C-CCccccc-----C
Q 040326 172 IT------------SEYFKYQDMTRILFP---DSQNRTLCEETVVNEELFETLSLRVNYMEQDR-Y-GGFCQQN-----I 229 (285)
Q Consensus 172 ~t------------~~~~~~w~~~~~~~~---~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F-~g~~~~~-----~ 229 (285)
-- ..+.+.|.....++. ...||++|| .+.++ ..-++.+||..+ | |..|.++ +
T Consensus 169 wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN--~v~~~----~p~~~~~Lp~~wN~~~d~~~y~~~~~~~ 242 (304)
T cd06430 169 MRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLIN--IIFHH----NPEMLYVFPCHWNYRPDHCMYGSNCKAA 242 (304)
T ss_pred HHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHH--HHHcC----CCCeEEEcCccccCCccceeeccccccc
Confidence 21 223444444222332 257999999 55432 123567777642 2 3566543 3
Q ss_pred CCCceEEEeccccCChhhhHHHHHHHHHHHHhhh
Q 040326 230 NMDTICTVRANCCDDTESKLHDLKLLLEDWRSFT 263 (285)
Q Consensus 230 d~~~~~~vHan~~~G~~~K~~~lr~~l~dw~~~~ 263 (285)
+...+.++|.|=..=+.+|.-.+|.+-..-+.|.
T Consensus 243 ~~~~~~~~H~n~~~~~~~~~~~f~~~~~~~~~~~ 276 (304)
T cd06430 243 EEEGVFILHGNRGVYHSDKQPAFRAVYEAIREYT 276 (304)
T ss_pred ccccceEEEcCCCCCCCccchHHHHHHHHHHhcc
Confidence 3457889999976557899999999987777777
No 13
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=94.50 E-value=0.42 Score=45.20 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=80.2
Q ss_pred EEEEeCccccCC-cchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCC--cEE----EeecCcc-cc--cccc
Q 040326 28 IITMVGQEWASP-GSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHP--HCF----YLSNSST-RY--TKKK 97 (285)
Q Consensus 28 ilt~~n~~~~~~-~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~--~c~----~~~~~g~-~~--~s~~ 97 (285)
|+-+++.+|+.| |.-+..-|++-+ ....-=|.++.-+++|-.+.+++.-. .++ ....+.. .+ -++.
T Consensus 5 Iv~a~D~nY~~~~gvsI~SiL~~n~----~~~~~fhil~~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~~~~~~~~ 80 (325)
T COG1442 5 IAFAFDKNYLIPAGVSIYSLLEHNR----KIFYKFHILVDGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFLDYPPFTKR 80 (325)
T ss_pred EEEEcccccchhHHHHHHHHHHhCc----cccEEEEEEecCCCHHHHHHHHHHHHhhccceeeEEEechhhhcccccccc
Confidence 667788899996 444555555533 11233478888899998888876621 111 1111110 22 3567
Q ss_pred cccchhhHHHHHHHHHHhcceEEEEeccEEEecCcccccCCC--C-CeEEecCCCCC----------CCCCCCCccceEE
Q 040326 98 QLSLPQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQVDCL--K-EMTIACDVYSD----------DLQNISYVKDGGF 164 (285)
Q Consensus 98 ~~~~~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~~~~--a-Di~~~~D~~~~----------~~~~~~~~~NsGf 164 (285)
|..|+..|.- +-+++...=.+|+.|+|||..++=-+.|.-+ . =+.+.-|.... .+...+..+|+|+
T Consensus 81 ~s~~v~~R~f-iadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG~ 159 (325)
T COG1442 81 FSKMVLVRYF-LADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAGV 159 (325)
T ss_pred hHHHHHHHHH-HHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccce
Confidence 7777776654 3445555567999999999999876655321 1 12222343321 1223567799999
Q ss_pred EEE
Q 040326 165 FYL 167 (285)
Q Consensus 165 ~~~ 167 (285)
+++
T Consensus 160 lli 162 (325)
T COG1442 160 LLI 162 (325)
T ss_pred eee
Confidence 996
No 14
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=92.20 E-value=0.65 Score=42.36 Aligned_cols=121 Identities=12% Similarity=-0.011 Sum_probs=64.2
Q ss_pred cchhhHHHHHHHHHHhcceEEEEeccEEEecCcccccCCCC--CeEEecCCCCCCCCCCCCccceEEEEEEe-----Chh
Q 040326 100 SLPQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQVDCLK--EMTIACDVYSDDLQNISYVKDGGFFYLKS-----NAI 172 (285)
Q Consensus 100 ~~~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~~~~a--Di~~~~D~~~~~~~~~~~~~NsGf~~~R~-----t~~ 172 (285)
.++..|..+-.-+=+. =.||+.|+|||-.+|=-+.+..+- .+..... ...|+|++++-. ..-
T Consensus 99 ~~~y~Rl~ip~llp~~-~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~----------dyfNsGV~linl~~wr~~~i 167 (257)
T cd06429 99 LLNFARFYLPELFPKL-EKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVE----------TSWNPGVNVVNLTEWRRQNV 167 (257)
T ss_pred HHHHHHHHHHHHhhhh-CeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEh----------hhcccceEEEeHHHHHhccH
Confidence 3444454433222222 269999999999998777765322 1222211 168999999865 333
Q ss_pred HHHHHHHHHHHHh----cCCCCCChhhhhHHhhccccccCCCeEEEEeccCC--CC-Ccccc--cCCCCceEEEeccc
Q 040326 173 TSEYFKYQDMTRI----LFPDSQNRTLCEETVVNEELFETLSLRVNYMEQDR--YG-GFCQQ--NINMDTICTVRANC 241 (285)
Q Consensus 173 t~~~~~~w~~~~~----~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~--F~-g~~~~--~~d~~~~~~vHan~ 241 (285)
+.+++ .|..... ......||+++| .+..+ ++..||... ++ |.... ......+.++|-+-
T Consensus 168 ~~~~~-~~~~~~~~~~~~~~~~~dqd~ln--~~~~~-------~~~~L~~~wN~~~l~~~~~~~~~~~~~~~IIHy~G 235 (257)
T cd06429 168 TETYE-KWMELNQEEEVTLWKLITLPPGL--IVFYG-------LTSPLDPSWHVRGLGYNYGIRPQDIKAAAVLHFNG 235 (257)
T ss_pred HHHHH-HHHHHhhhcccchhhcCCccHHH--HHccC-------eeEECChHHcccCCcccccccccccCCcEEEEECC
Confidence 33443 3433211 123456899999 44322 355555431 11 21111 12244688999763
No 15
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=91.79 E-value=3.7 Score=38.85 Aligned_cols=201 Identities=7% Similarity=-0.020 Sum_probs=96.6
Q ss_pred CeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEE--eCHHHHHHHHHh----CCcEEEeecCcc---cc-c
Q 040326 25 RTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVA--LDSKAFQYCKTV----HPHCFYLSNSST---RY-T 94 (285)
Q Consensus 25 ~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA--~D~~~~~~c~~~----~~~c~~~~~~g~---~~-~ 94 (285)
..=|+.++|.+|+. -+..-+.|+-.-. +..-=++-|++ +.++..+.+++. +..+-....+.. .+ .
T Consensus 25 ~i~Iv~~~D~ny~~---~~~vsi~Sil~nn--~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~~id~~~~~~~~~ 99 (334)
T PRK15171 25 SLDIAYGIDKNFLF---GCGVSIASVLLNN--PDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIYLINCERLKSLPS 99 (334)
T ss_pred ceeEEEECcHhhHH---HHHHHHHHHHHhC--CCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeCHHHHhCCcc
Confidence 34478889999988 5666666653110 11111333443 444555554443 333222211110 11 1
Q ss_pred ccccccchhhHHHHHHHHHHhcc-eEEEEeccEEEecCcccccCCCC--C-eEEe-cCCCC----------CCCCCCCCc
Q 040326 95 KKKQLSLPQLRNKFWQEVIELAY-SVVFTEVDVMWLRNPILQVDCLK--E-MTIA-CDVYS----------DDLQNISYV 159 (285)
Q Consensus 95 s~~~~~~~~~K~~~i~~vL~lGy-~vl~sDvDvVWlrnP~~~~~~~a--D-i~~~-~D~~~----------~~~~~~~~~ 159 (285)
+..+...+..|.. +-++|...+ .||+.|+|||-.+|--+.+.-+- + +... .|... +.+......
T Consensus 100 ~~~~s~atY~Rl~-ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~Y 178 (334)
T PRK15171 100 TKNWTYATYFRFI-IADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGY 178 (334)
T ss_pred cCcCCHHHHHHHH-HHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccc
Confidence 2233333444432 334554456 49999999999998877775432 2 2222 23211 001112347
Q ss_pred cceEEEEEEeCh-hHHHHHHHHHHHHhc-----CCCCCChhhhhHHhhccccccCCCeEEEEeccCC-CC-Ccccc----
Q 040326 160 KDGGFFYLKSNA-ITSEYFKYQDMTRIL-----FPDSQNRTLCEETVVNEELFETLSLRVNYMEQDR-YG-GFCQQ---- 227 (285)
Q Consensus 160 ~NsGf~~~R~t~-~t~~~~~~w~~~~~~-----~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F~-g~~~~---- 227 (285)
+|+|+|++--.. +-..+.+.+.+.... .-...||++|| .+.++ ++..||..+ +. +....
T Consensus 179 FNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN--~~~~~-------~~~~L~~~wN~~~~~~~~~~~~ 249 (334)
T PRK15171 179 FNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLN--ILLAG-------KVKFIDAKYNTQFSLNYELKDS 249 (334)
T ss_pred eecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHH--HHHcC-------CeEECCHhhCCccchhHHHHhc
Confidence 999999985432 111122222221111 11347999999 55332 466676532 21 21110
Q ss_pred --cCCCCceEEEecc
Q 040326 228 --NINMDTICTVRAN 240 (285)
Q Consensus 228 --~~d~~~~~~vHan 240 (285)
..-...|.++|-+
T Consensus 250 ~~~~~~~~p~IIHy~ 264 (334)
T PRK15171 250 VINPVNDETVFIHYI 264 (334)
T ss_pred ccccccCCCEEEEEC
Confidence 0112357899977
No 16
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=91.72 E-value=0.52 Score=41.76 Aligned_cols=92 Identities=13% Similarity=0.129 Sum_probs=67.0
Q ss_pred ccchhhHHHHHHHHHHhcceEEEEeccEEEecCccc----ccCCCCCeEEecCCCCCCCCCCCCccceEEEEEEeChhHH
Q 040326 99 LSLPQLRNKFWQEVIELAYSVVFTEVDVMWLRNPIL----QVDCLKEMTIACDVYSDDLQNISYVKDGGFFYLKSNAITS 174 (285)
Q Consensus 99 ~~~~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~----~~~~~aDi~~~~D~~~~~~~~~~~~~NsGf~~~R~t~~t~ 174 (285)
...+.+|--++..+|..===|||.|+||.- -||-- ++.+..|+++- |-+. ...+.+|-|++|.|+.++
T Consensus 25 kd~fFrRHCvva~~L~~~~~vlflDaDigV-vNp~~~iEefid~~~Di~fy-dR~~------n~Ei~agsYlvkNT~~~~ 96 (222)
T PF03314_consen 25 KDKFFRRHCVVAKILPEYDWVLFLDADIGV-VNPNRRIEEFIDEGYDIIFY-DRFF------NWEIAAGSYLVKNTEYSR 96 (222)
T ss_pred hhHHHHHHHHHHHHhccCCEEEEEcCCcee-ecCcccHHHhcCCCCcEEEE-eccc------chhhhhccceeeCCHHHH
Confidence 456778888899999854459999999864 37844 34566788775 3222 356889999999999999
Q ss_pred HHHHHHHHHHhcCCC---CCChhhhhH
Q 040326 175 EYFKYQDMTRILFPD---SQNRTLCEE 198 (285)
Q Consensus 175 ~~~~~w~~~~~~~~~---~~DQ~~fn~ 198 (285)
+|+..|...-.+-|. ..|-.++..
T Consensus 97 ~fl~~~a~~E~~lP~sfhGtDNGAlH~ 123 (222)
T PF03314_consen 97 DFLKEWADYEFKLPNSFHGTDNGALHI 123 (222)
T ss_pred HHHHHHhhhCccCCCccccCccHHHHH
Confidence 999999874344453 357777763
No 17
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=90.31 E-value=1.2 Score=40.30 Aligned_cols=124 Identities=11% Similarity=0.031 Sum_probs=64.0
Q ss_pred HHHHHHHhcc-eEEEEeccEEEecCcccccCCCC-C-eEE-ecCCCCCC-----C---------C-CCCCccceEEEEEE
Q 040326 108 FWQEVIELAY-SVVFTEVDVMWLRNPILQVDCLK-E-MTI-ACDVYSDD-----L---------Q-NISYVKDGGFFYLK 168 (285)
Q Consensus 108 ~i~~vL~lGy-~vl~sDvDvVWlrnP~~~~~~~a-D-i~~-~~D~~~~~-----~---------~-~~~~~~NsGf~~~R 168 (285)
++..+|...+ .||+.|+|+|...|=-+.+.-+- | +.. ..|+-... . . ......|||+|++-
T Consensus 87 ~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVmliN 166 (248)
T cd06432 87 FLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYVVD 166 (248)
T ss_pred HHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEEEe
Confidence 3444787777 59999999999875555443211 1 222 22321100 0 0 11236899999974
Q ss_pred e-----ChhHHHHHHHHHHHHhcCC---CCCChhhhhHHhhccccccCCCeEEEEeccCC-CC-CcccccCCCCceEEEe
Q 040326 169 S-----NAITSEYFKYQDMTRILFP---DSQNRTLCEETVVNEELFETLSLRVNYMEQDR-YG-GFCQQNINMDTICTVR 238 (285)
Q Consensus 169 ~-----t~~t~~~~~~w~~~~~~~~---~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~-F~-g~~~~~~d~~~~~~vH 238 (285)
= ..-+.++.+ .++.....+ ..+||+++| .+.+ +.++..||... +. ++|-... ..++-++|
T Consensus 167 L~~wR~~~i~~~~~~-~~~~l~~~~~~l~~~DQDiLN--~v~~------~~~i~~Lp~~w~~~~~~~~~~~-~~~~~~~~ 236 (248)
T cd06432 167 LKRFRRIAAGDRLRG-QYQQLSQDPNSLANLDQDLPN--NMQH------QVPIFSLPQEWLWCETWCSDES-KKKAKTID 236 (248)
T ss_pred HHHHHHHhHHHHHHH-HHHHHhcCCCccccCCchhhH--HHhc------cCCeEECChHHHHHHHHhcccc-cCccceee
Confidence 3 222222221 111112222 247999999 5542 23377888764 11 4554332 34455777
Q ss_pred ccc
Q 040326 239 ANC 241 (285)
Q Consensus 239 an~ 241 (285)
-.|
T Consensus 237 ~~~ 239 (248)
T cd06432 237 LCN 239 (248)
T ss_pred ccc
Confidence 655
No 18
>PLN02829 Probable galacturonosyltransferase
Probab=88.36 E-value=1.8 Score=44.10 Aligned_cols=142 Identities=11% Similarity=0.092 Sum_probs=76.9
Q ss_pred HHHHHHhcc-eEEEEeccEEEecCcccccCCC--CCeE-EecCCCC-----------CCC-----CC-CCCccceEEEEE
Q 040326 109 WQEVIELAY-SVVFTEVDVMWLRNPILQVDCL--KEMT-IACDVYS-----------DDL-----QN-ISYVKDGGFFYL 167 (285)
Q Consensus 109 i~~vL~lGy-~vl~sDvDvVWlrnP~~~~~~~--aDi~-~~~D~~~-----------~~~-----~~-~~~~~NsGf~~~ 167 (285)
+-+++. .+ .||+.|.|||-.+|--+.+.-+ .-+. +..|+.. .+| .+ .....|+|++++
T Consensus 450 LPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFNSGVmVI 528 (639)
T PLN02829 450 LPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWAYGMNVF 528 (639)
T ss_pred HHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCcccceecceEEE
Confidence 334555 34 6999999999999887776422 1122 2223311 011 01 233588999987
Q ss_pred -----EeChhHHHHHHHHHHHHhcCCCCCChhhhhHHhhc-cccccCCCeEEEEeccCC-C-C-Cccc--ccCCCCceEE
Q 040326 168 -----KSNAITSEYFKYQDMTRILFPDSQNRTLCEETVVN-EELFETLSLRVNYMEQDR-Y-G-GFCQ--QNINMDTICT 236 (285)
Q Consensus 168 -----R~t~~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v~-~~~~~~~gl~v~~Ld~~~-F-~-g~~~--~~~d~~~~~~ 236 (285)
|-..-|..+. .|... ......|||.++|-.++. .+ +++.||... + + |... ...+...+.+
T Consensus 529 NL~~WRe~nITe~y~-~wm~~-n~~r~L~dlgaLPp~Ll~F~g-------~i~~LD~rWNv~GLGy~~~v~~~~i~~aaI 599 (639)
T PLN02829 529 DLDEWKRQNITEVYH-SWQKL-NHDRQLWKLGTLPPGLITFWK-------RTYPLDRSWHVLGLGYNPNVNQRDIERAAV 599 (639)
T ss_pred eHHHHHHhChHHHHH-HHHHH-ccCCccccccCCChHHHHhcC-------ceEecChhheecCCCCCcccchhcccCCeE
Confidence 4555555555 77653 223356999999942221 22 245555432 2 2 2211 1245667889
Q ss_pred EeccccCCh---hhhHHHHHHHHHHHHhhhc
Q 040326 237 VRANCCDDT---ESKLHDLKLLLEDWRSFTK 264 (285)
Q Consensus 237 vHan~~~G~---~~K~~~lr~~l~dw~~~~~ 264 (285)
+|.|-. ++ +..++.+| ..|.+|..
T Consensus 600 IHynG~-~KPWle~~i~~yr---~lW~kYl~ 626 (639)
T PLN02829 600 IHYNGN-MKPWLEIGIPKYR---NYWSKYVD 626 (639)
T ss_pred EEECCC-CCccccCCcccch---HHHHHHHh
Confidence 997742 11 12223455 55777765
No 19
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=85.75 E-value=17 Score=34.85 Aligned_cols=179 Identities=11% Similarity=0.067 Sum_probs=103.8
Q ss_pred HHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhcce---EEEEeccEEEecCcccc-----cC-------
Q 040326 73 FQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELAYS---VVFTEVDVMWLRNPILQ-----VD------- 137 (285)
Q Consensus 73 ~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lGy~---vl~sDvDvVWlrnP~~~-----~~------- 137 (285)
-++|+..|..-++..+... ....=....|.|+-+|++.+..=-+ +.+.|.|.+.+ ||-.- +.
T Consensus 132 idYA~rHgy~~~~~~~~~~--~~~~e~~~~W~KiP~Ir~tM~kyP~AeWIWWlD~DAlim-n~~lsL~~~ilk~~~L~~~ 208 (364)
T KOG4748|consen 132 IDYARRHGYEFEYKNATLD--KRYHELPGVWAKLPAIRQTMLKYPDAEWIWWLDQDALIM-NPDLSLQDHILKPENLVTH 208 (364)
T ss_pred HHHHHHhCCeEEEEecccc--cccccccchhHHhHHHHHHHHHCCCCcEEEEecccchhh-CcccchhHHhcCHHHHHHh
Confidence 3789988888777665421 1112345689999999999887666 78889998764 33111 11
Q ss_pred --C-CCCeEEecC-------CCCCC-CC-------CCCCccceEEEEEEeChhHHHHHHHHHHHHhcC--CCCCChhhhh
Q 040326 138 --C-LKEMTIACD-------VYSDD-LQ-------NISYVKDGGFFYLKSNAITSEYFKYQDMTRILF--PDSQNRTLCE 197 (285)
Q Consensus 138 --~-~aDi~~~~D-------~~~~~-~~-------~~~~~~NsGf~~~R~t~~t~~~~~~w~~~~~~~--~~~~DQ~~fn 197 (285)
+ +.-.+.... .+.-+ ++ ...+.+|+|=+++|.++-+..+++.|-+....+ -+..||.++-
T Consensus 209 l~~nd~~~~~~~n~~~~~~~~~~~d~~~~~~~ii~qD~nG~naGSfLirns~~~~~llD~w~dp~l~~~~~~~~Eq~al~ 288 (364)
T KOG4748|consen 209 LLRNDQKSINPLNIFRLRPRTPSLDDLEDIAFIIPQDCNGINAGSFLIRNSEWGRLLLDAWNDPLLYELLWGQKEQDALG 288 (364)
T ss_pred hccccccccccCCccccccccccccchhhhceecccCCCCccccceEEecCccchhHHHhccCHHHHhhccchHHHHHHH
Confidence 1 110110000 00000 00 124559999999999999999999996643322 2457999988
Q ss_pred HHhh-ccccccCCCeEEEEeccCC---CC-CcccccCCCCceEEEeccccCChhhhHHHHHHHHHHHHhhhccC
Q 040326 198 ETVV-NEELFETLSLRVNYMEQDR---YG-GFCQQNINMDTICTVRANCCDDTESKLHDLKLLLEDWRSFTKKN 266 (285)
Q Consensus 198 ~~~v-~~~~~~~~gl~v~~Ld~~~---F~-g~~~~~~d~~~~~~vHan~~~G~~~K~~~lr~~l~dw~~~~~~~ 266 (285)
. ++ .|.... -.+.+|+..+ |+ |.|.++.+ .-..++|---|-+. ..+++.|.+|..+-
T Consensus 289 ~-~~e~h~~l~---~~vgilp~r~ins~~~~~~~~g~~-egdlvvhFaGC~~~-------~~C~~~~~~y~~~~ 350 (364)
T KOG4748|consen 289 H-FLENHPQLH---SHVGILPLRYINSYPNGAPGYGYE-EGDLVVHFAGCYVR-------NRCLEEMEKYFNLI 350 (364)
T ss_pred H-HHhhchhhh---hheeeccHHHHhcCCCCCCCCccc-cCCeEEEecccccH-------hHHHHHHHHHHHHH
Confidence 4 33 333221 2466676654 44 55544433 23567777666222 24666666666543
No 20
>PLN02659 Probable galacturonosyltransferase
Probab=77.04 E-value=16 Score=36.74 Aligned_cols=158 Identities=15% Similarity=0.124 Sum_probs=81.3
Q ss_pred ccccccccc-hhhHHHHHHHHHH-hcceEEEEeccEEEecCcccccCCCC--CeEEe-cCC-----CC-----------C
Q 040326 93 YTKKKQLSL-PQLRNKFWQEVIE-LAYSVVFTEVDVMWLRNPILQVDCLK--EMTIA-CDV-----YS-----------D 151 (285)
Q Consensus 93 ~~s~~~~~~-~~~K~~~i~~vL~-lGy~vl~sDvDvVWlrnP~~~~~~~a--Di~~~-~D~-----~~-----------~ 151 (285)
+..+.|..| +..|+.+ -++|. ++ .||+.|.|||-.+|=-+.+.-+- .+... .|+ +. .
T Consensus 321 ~~~p~ylS~~nY~RL~I-PeLLP~Ld-KVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s 398 (534)
T PLN02659 321 ALSPKYNSVMNHIRIHL-PELFPSLN-KVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFS 398 (534)
T ss_pred cCCccceeHHHHHHHHH-HHHhhhcC-eEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhccc
Confidence 456777665 3455544 33444 33 69999999999987666654221 12222 232 10 0
Q ss_pred CCC-----C-CCCccceEEEEE-----EeChhHHHHHHHHHHHHh-cCCCCCChhhhhHH-hhccccccCCCeEEEEecc
Q 040326 152 DLQ-----N-ISYVKDGGFFYL-----KSNAITSEYFKYQDMTRI-LFPDSQNRTLCEET-VVNEELFETLSLRVNYMEQ 218 (285)
Q Consensus 152 ~~~-----~-~~~~~NsGf~~~-----R~t~~t~~~~~~w~~~~~-~~~~~~DQ~~fn~~-~v~~~~~~~~gl~v~~Ld~ 218 (285)
+|. + .....|+|++++ |-..-|.+++ .|++... ..-..+||.++|.. .+..+ ++..||.
T Consensus 399 ~p~i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l-~~l~~n~~~~l~l~DQdaLp~~LivF~g-------~v~~LD~ 470 (534)
T PLN02659 399 HPLIAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYH-HWLEENLKSDLSLWQLGTLPPGLIAFHG-------HVHVIDP 470 (534)
T ss_pred chhhhhccCccccceecceeEeeHHHHHhcChHHHHH-HHHHhcccccccccccccchHHHHHhcC-------CEEECCh
Confidence 010 1 133678899987 4444454444 3433211 22245899999632 22222 3566665
Q ss_pred CC--CC-Ccccc--cCCCCceEEEecc-----ccCChhhhHHHHHHHHHHHHhhhccC
Q 040326 219 DR--YG-GFCQQ--NINMDTICTVRAN-----CCDDTESKLHDLKLLLEDWRSFTKKN 266 (285)
Q Consensus 219 ~~--F~-g~~~~--~~d~~~~~~vHan-----~~~G~~~K~~~lr~~l~dw~~~~~~~ 266 (285)
.. ++ |.... ..+...+.++|-| |.... ++..| ..|.+|....
T Consensus 471 rWN~~gLg~~~~~~~~~i~~paIIHYnG~~KPW~~~~---~~~yr---~~W~kYl~~s 522 (534)
T PLN02659 471 FWHMLGLGYQENTSLADAESAGVVHFNGRAKPWLDIA---FPQLR---PLWAKYIDSS 522 (534)
T ss_pred hheecCCcccccccccccCCcEEEEECCCCCcccccc---CCcch---hHHHHHhccC
Confidence 32 33 22111 1234678899976 33222 23334 4678877643
No 21
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=76.69 E-value=10 Score=34.89 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=61.7
Q ss_pred HHHHHHhcCCC-eEEEE-EeCccccCCcchHHHHHHHhccccccccc----cccEEEEEeCHHHHHHHH---HhCCcEEE
Q 040326 15 QLLRRTTMQDR-TVIIT-MVGQEWASPGSVLDLFLESFCIGEETKHL----LNHLLIVALDSKAFQYCK---TVHPHCFY 85 (285)
Q Consensus 15 ~ll~~~A~~d~-tVilt-~~n~~~~~~~s~l~~fl~s~r~g~~t~~l----~~~~lVvA~D~~~~~~c~---~~~~~c~~ 85 (285)
++|++.-.+.+ ||-+| ++-..|.. |++.|++|.. +.+ -.++.|++-+.......+ ...+..+.
T Consensus 23 ~~l~~~y~~~n~tIgl~vfatGkY~~---f~~~F~~SAE-----k~Fm~g~~v~YyVFTD~~~~~p~v~lg~~r~~~V~~ 94 (271)
T cd02515 23 DVLDEYYRKQNITIGLTVFAVGKYTE---FLERFLESAE-----KHFMVGYRVIYYIFTDKPAAVPEVELGPGRRLTVLK 94 (271)
T ss_pred HHHHHHHHhcCCEEEEEEEEeccHHH---HHHHHHHHHH-----HhccCCCeeEEEEEeCCcccCcccccCCCceeEEEE
Confidence 35555553333 44444 35567888 9999999965 333 247777777665533221 11123333
Q ss_pred eecCcccccccccccchhhHHHHHHHHHH--h--cce-EEEEeccEEEecC
Q 040326 86 LSNSSTRYTKKKQLSLPQLRNKFWQEVIE--L--AYS-VVFTEVDVMWLRN 131 (285)
Q Consensus 86 ~~~~g~~~~s~~~~~~~~~K~~~i~~vL~--l--Gy~-vl~sDvDvVWlrn 131 (285)
... ...|..++..|.+++....+ . .+| +.+.|+|.++.++
T Consensus 95 v~~------~~~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ 139 (271)
T cd02515 95 IAE------ESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGP 139 (271)
T ss_pred ecc------ccCCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeec
Confidence 322 24677778888888877766 3 456 4556999997663
No 22
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=74.11 E-value=24 Score=36.28 Aligned_cols=159 Identities=13% Similarity=0.110 Sum_probs=83.3
Q ss_pred cccccccccc-hhhHHHHHHHHHHhcceEEEEeccEEEecCcccccCCC--CCeE-EecCCCCC-----------CCC--
Q 040326 92 RYTKKKQLSL-PQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQVDCL--KEMT-IACDVYSD-----------DLQ-- 154 (285)
Q Consensus 92 ~~~s~~~~~~-~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~~~~--aDi~-~~~D~~~~-----------~~~-- 154 (285)
.|..+.|..+ +..|+. +-++|..=-.||+.|.|||-.+|--+.+.-+ ..+. +..|+... +|.
T Consensus 451 k~r~p~ylS~lnY~Rf~-LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~ 529 (657)
T PLN02910 451 KYRNPKYLSMLNHLRFY-LPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKIS 529 (657)
T ss_pred ccCCcchhhHHHHHHHH-HHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhh
Confidence 3444555443 234443 4445552125999999999999987776422 1122 22233210 111
Q ss_pred ----CCCCccceEEEEE-----EeChhHHHHHHHHHHHHhcCCCCCChhhhhHHhh-ccccccCCCeEEEEeccCC--CC
Q 040326 155 ----NISYVKDGGFFYL-----KSNAITSEYFKYQDMTRILFPDSQNRTLCEETVV-NEELFETLSLRVNYMEQDR--YG 222 (285)
Q Consensus 155 ----~~~~~~NsGf~~~-----R~t~~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v-~~~~~~~~gl~v~~Ld~~~--F~ 222 (285)
...-..|+|++++ |-..-|. .++.|.+. ......|||.++|--++ -.+ ++..||... .+
T Consensus 530 ~yFNs~aCyfNsGVmVIDL~~WRe~nITe-~ye~w~el-n~~~~L~dqgsLPpgLLvF~g-------~i~pLD~rWNv~G 600 (657)
T PLN02910 530 ENFDPNACGWAFGMNMFDLKEWRKRNITG-IYHYWQDL-NEDRTLWKLGSLPPGLITFYN-------LTYPLDRSWHVLG 600 (657)
T ss_pred hccCCCCceeecccEEEeHHHHHHhhHHH-HHHHHHHh-cccccccccCCCChHHHHHhC-------ceeecCchheecC
Confidence 0133456799987 3444444 77778663 33446799999993122 122 244555432 22
Q ss_pred -Ccc--cccCCCCceEEEeccccCCh---hhhHHHHHHHHHHHHhhhc
Q 040326 223 -GFC--QQNINMDTICTVRANCCDDT---ESKLHDLKLLLEDWRSFTK 264 (285)
Q Consensus 223 -g~~--~~~~d~~~~~~vHan~~~G~---~~K~~~lr~~l~dw~~~~~ 264 (285)
|.- ........+.++|.|-. ++ +..++..| +.|.+|..
T Consensus 601 LGyd~~v~~~~i~~AAVLHynG~-~KPWl~l~i~~Yr---~~W~kYl~ 644 (657)
T PLN02910 601 LGYDPALNQTEIENAAVVHYNGN-YKPWLDLAIAKYK---PYWSRYVQ 644 (657)
T ss_pred CCCCcccccccccCcEEEEeCCC-CCcccccCcccch---HHHHHHcc
Confidence 211 11234567899997732 11 12224444 56888866
No 23
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=72.00 E-value=20 Score=32.68 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=26.2
Q ss_pred ceEEEEeccEEEecCcccccCCCCCeEEecCCCCCCCCCCCCccceEEEEE
Q 040326 117 YSVVFTEVDVMWLRNPILQVDCLKEMTIACDVYSDDLQNISYVKDGGFFYL 167 (285)
Q Consensus 117 y~vl~sDvDvVWlrnP~~~~~~~aDi~~~~D~~~~~~~~~~~~~NsGf~~~ 167 (285)
=.|||.|+|.|-++||-.+|. ......+|.+|+
T Consensus 92 eevllLDaD~vpl~~p~~lF~------------------~~~yk~tG~lfw 124 (271)
T PF11051_consen 92 EEVLLLDADNVPLVDPEKLFE------------------SEEYKKTGALFW 124 (271)
T ss_pred ceEEEEcCCcccccCHHHHhc------------------CccccccCEEEE
Confidence 349999999999999988884 124467788888
No 24
>PLN02870 Probable galacturonosyltransferase
Probab=69.32 E-value=17 Score=36.66 Aligned_cols=138 Identities=16% Similarity=0.082 Sum_probs=70.9
Q ss_pred ccccccccc-hhhHHHHHHHHHH-hcceEEEEeccEEEecCcccccCCCC--CeEEe-cCCCCC----------------
Q 040326 93 YTKKKQLSL-PQLRNKFWQEVIE-LAYSVVFTEVDVMWLRNPILQVDCLK--EMTIA-CDVYSD---------------- 151 (285)
Q Consensus 93 ~~s~~~~~~-~~~K~~~i~~vL~-lGy~vl~sDvDvVWlrnP~~~~~~~a--Di~~~-~D~~~~---------------- 151 (285)
+.++.|..+ ...|+.+- +++. +. .||+.|.|||-.+|--+.+.-+- -+... .|+...
T Consensus 320 ~~~p~ylS~lny~Rl~LP-elLP~Ld-KVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs 397 (533)
T PLN02870 320 ARSPKYISLLNHLRIYLP-ELFPNLD-KVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFS 397 (533)
T ss_pred cCCccccCHHHHHHHHHH-HHhhhcC-eEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccc
Confidence 344555443 33454443 3444 33 69999999999998877765321 12222 232111
Q ss_pred CCC------CCCCccceEEEEE-----EeChhHHHHHHHHHHHH-hcCCCCCChhhhhHH-hhccccccCCCeEEEEecc
Q 040326 152 DLQ------NISYVKDGGFFYL-----KSNAITSEYFKYQDMTR-ILFPDSQNRTLCEET-VVNEELFETLSLRVNYMEQ 218 (285)
Q Consensus 152 ~~~------~~~~~~NsGf~~~-----R~t~~t~~~~~~w~~~~-~~~~~~~DQ~~fn~~-~v~~~~~~~~gl~v~~Ld~ 218 (285)
+|. ......|+|++++ |-..-|.+++ .|.... .+.-..+||.+++.. .+..+ ++..||.
T Consensus 398 ~p~i~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~-~~l~~n~~~~l~l~DQdaLp~~livf~g-------~v~~LD~ 469 (533)
T PLN02870 398 HPLIAKNLDPEECAWAYGMNIFDLRAWRKTNIRETYH-SWLKENLKSNLTMWKLGTLPPALIAFKG-------HVHPIDP 469 (533)
T ss_pred cchhhcccCcccceeeccchhccHHHHHHcChHHHHH-HHHHhhhhcCceecccccccHhHHHhcC-------ceEECCh
Confidence 010 1133567999986 4444444444 343321 222356999999621 22121 3566665
Q ss_pred CC--CC-Cccc--ccCCCCceEEEecc
Q 040326 219 DR--YG-GFCQ--QNINMDTICTVRAN 240 (285)
Q Consensus 219 ~~--F~-g~~~--~~~d~~~~~~vHan 240 (285)
.. ++ |... .......+.++|-|
T Consensus 470 rWN~~gLgy~~~~~~~~i~~aaIIHY~ 496 (533)
T PLN02870 470 SWHMLGLGYQSKTNIESVKKAAVIHYN 496 (533)
T ss_pred HHhcCCCCCcccccccccCCcEEEEEC
Confidence 42 33 2211 11335568899976
No 25
>PLN02523 galacturonosyltransferase
Probab=65.38 E-value=1.6e+02 Score=29.93 Aligned_cols=144 Identities=9% Similarity=0.062 Sum_probs=74.7
Q ss_pred HHHHHHhcceEEEEeccEEEecCcccccCCCC-C-eE-EecCCCC-----------CCCCCCCCccce-------EEEEE
Q 040326 109 WQEVIELAYSVVFTEVDVMWLRNPILQVDCLK-E-MT-IACDVYS-----------DDLQNISYVKDG-------GFFYL 167 (285)
Q Consensus 109 i~~vL~lGy~vl~sDvDvVWlrnP~~~~~~~a-D-i~-~~~D~~~-----------~~~~~~~~~~Ns-------Gf~~~ 167 (285)
+-+++..==.||+.|.|||-.+|--+.+.-+- + +. ...|+.. ++|. ....+|+ |++++
T Consensus 370 IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~-i~~yFNs~aC~wnsGVmlI 448 (559)
T PLN02523 370 LPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPL-IKEKFNPKACAWAYGMNIF 448 (559)
T ss_pred HHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchh-hhhCcCCCcccccCCcEEE
Confidence 34455532259999999999999877775321 1 22 2234421 0111 1124555 99987
Q ss_pred -----EeChhHHHHHHHHHHHHhcCCCCCChhhhhHHhh-ccccccCCCeEEEEeccCC-CC--Cccc--ccCCCCceEE
Q 040326 168 -----KSNAITSEYFKYQDMTRILFPDSQNRTLCEETVV-NEELFETLSLRVNYMEQDR-YG--GFCQ--QNINMDTICT 236 (285)
Q Consensus 168 -----R~t~~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v-~~~~~~~~gl~v~~Ld~~~-F~--g~~~--~~~d~~~~~~ 236 (285)
|-..-|.++ ..|.. .......|||.++|-.++ -.+ ++..||... +. |.-. ...+..++.+
T Consensus 449 NL~~WRe~nITek~-~~w~~-ln~~~~l~DqdaLpp~LivF~g-------ri~~LD~rWNvlglGy~~~i~~~~i~~paI 519 (559)
T PLN02523 449 DLDAWRREKCTEQY-HYWQN-LNENRTLWKLGTLPPGLITFYS-------TTKPLDKSWHVLGLGYNPSISMDEIRNAAV 519 (559)
T ss_pred eHHHHHHhchHHHH-HHHHH-hccccccccccccchHHHHhcC-------ceEecCchhhccCCccCCCccccccCCCEE
Confidence 445555554 56654 333346799999983111 111 355565442 22 2211 1234567899
Q ss_pred EeccccCCh--hhhHHHHHHHHHHHHhhhcc
Q 040326 237 VRANCCDDT--ESKLHDLKLLLEDWRSFTKK 265 (285)
Q Consensus 237 vHan~~~G~--~~K~~~lr~~l~dw~~~~~~ 265 (285)
+|-|-..-- +......| +.|.+|...
T Consensus 520 IHYnG~~KPWle~~i~~yr---~~W~kYl~~ 547 (559)
T PLN02523 520 IHFNGNMKPWLDIAMNQFK---PLWTKYVDY 547 (559)
T ss_pred EEECCCCCccccCCCCcch---HHHHHHHcc
Confidence 997732100 12223334 457777653
No 26
>PLN02867 Probable galacturonosyltransferase
Probab=59.72 E-value=36 Score=34.38 Aligned_cols=161 Identities=13% Similarity=0.078 Sum_probs=80.7
Q ss_pred cccccccccc-hhhHHHHHHHHHHhcc-eEEEEeccEEEecCcccccCCCC--CeEE-ecCCCC----------------
Q 040326 92 RYTKKKQLSL-PQLRNKFWQEVIELAY-SVVFTEVDVMWLRNPILQVDCLK--EMTI-ACDVYS---------------- 150 (285)
Q Consensus 92 ~~~s~~~~~~-~~~K~~~i~~vL~lGy-~vl~sDvDvVWlrnP~~~~~~~a--Di~~-~~D~~~---------------- 150 (285)
.+.++.|..+ +..|+.+ -+++. -+ .||+.|.|||-.+|--+.+.-+- -+.. -.|.+.
T Consensus 321 ~~~~pkylS~lnYlRflI-PeLLP-~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNf 398 (535)
T PLN02867 321 EALSPSCLSLLNHLRIYI-PELFP-DLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNF 398 (535)
T ss_pred hhcChhhhhHHHHHHHHH-HHHhh-ccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccc
Confidence 4455666554 3455544 34444 23 69999999999998877765321 1111 112110
Q ss_pred CCCC------CCCCccceEEEEEE-----eChhHHHHHHHHHHHHh-cCCCCCChhhhhHHhhccccccCCCeEEEEecc
Q 040326 151 DDLQ------NISYVKDGGFFYLK-----SNAITSEYFKYQDMTRI-LFPDSQNRTLCEETVVNEELFETLSLRVNYMEQ 218 (285)
Q Consensus 151 ~~~~------~~~~~~NsGf~~~R-----~t~~t~~~~~~w~~~~~-~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~ 218 (285)
.+|. ......|+|++.+- -..-|.++ ..|.+... .....+||+++|..++. . .=++..||.
T Consensus 399 snp~i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~-~~~Le~n~~~~~~l~dqd~LN~~Llv---F---~g~v~~LD~ 471 (535)
T PLN02867 399 SHPLISSNLDQERCAWLYGMNVFDLKAWRRTNITEAY-HKWLKLSLNSGLQLWQPGALPPALLA---F---KGHVHPIDP 471 (535)
T ss_pred cchhhhccCCCCCcceecceeeeeHHHHHHhcHHHHH-HHHHHhchhcccccccccccchHHHH---h---cCcEEECCh
Confidence 0110 11335789999873 34333333 34544211 12356899999953221 1 113566665
Q ss_pred CC-C-C-Ccccc---cCCCCceEEEeccccCC--hhhhHHHHHHHHHHHHhhhc
Q 040326 219 DR-Y-G-GFCQQ---NINMDTICTVRANCCDD--TESKLHDLKLLLEDWRSFTK 264 (285)
Q Consensus 219 ~~-F-~-g~~~~---~~d~~~~~~vHan~~~G--~~~K~~~lr~~l~dw~~~~~ 264 (285)
.. + + |.... ......+.++|-|-..- ++.-.+++| +.|.+|..
T Consensus 472 rWNv~gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~~~~yR---~~W~kyl~ 522 (535)
T PLN02867 472 SWHVAGLGSRPPEVPREILESAAVLHFSGPAKPWLEIGFPEVR---SLWYRHVN 522 (535)
T ss_pred hhcccCCCcccccchhhhcCCcEEEEECCCCCcccccCCCchh---HHHHHhcC
Confidence 42 2 2 22111 12245788999873210 011233455 45777665
No 27
>PLN02742 Probable galacturonosyltransferase
Probab=59.44 E-value=64 Score=32.65 Aligned_cols=151 Identities=11% Similarity=0.075 Sum_probs=78.8
Q ss_pred hhhHHHHHHHHHHhcceEEEEeccEEEecCcccccCCCC--CeE-EecCC------CC-----CCCC------CCCCccc
Q 040326 102 PQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQVDCLK--EMT-IACDV------YS-----DDLQ------NISYVKD 161 (285)
Q Consensus 102 ~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~~~~a--Di~-~~~D~------~~-----~~~~------~~~~~~N 161 (285)
+..|+.+- +++..==.||+.|+|||-..|--+.+.-+- -+. ..-|+ +. .+|. ...-..|
T Consensus 340 ~y~R~~lP-~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~~~aC~fN 418 (534)
T PLN02742 340 NHLRFYIP-EIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHFDPDACGWA 418 (534)
T ss_pred HHHHHHHH-HHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccCCCCccccc
Confidence 34555443 345421269999999999999877765321 122 22344 11 0111 1234578
Q ss_pred eEEEEE-----EeChhHHHHHHHHHHHHhcCCCCCChhhhhHHhh-ccccccCCCeEEEEeccCC-C-C-Cccc--ccCC
Q 040326 162 GGFFYL-----KSNAITSEYFKYQDMTRILFPDSQNRTLCEETVV-NEELFETLSLRVNYMEQDR-Y-G-GFCQ--QNIN 230 (285)
Q Consensus 162 sGf~~~-----R~t~~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v-~~~~~~~~gl~v~~Ld~~~-F-~-g~~~--~~~d 230 (285)
+|++.+ |-..-|. .+..|.+ .......+||.++|-.++ -.+ ++..||... . + |+.. ....
T Consensus 419 sGV~ViDL~~WRe~nITe-~~~~w~e-~n~~~~l~d~gaLpp~LLaF~g-------~~~~LD~rWNv~gLG~~~~v~~~~ 489 (534)
T PLN02742 419 FGMNVFDLVAWRKANVTA-IYHYWQE-QNVDRTLWKLGTLPPGLLTFYG-------LTEPLDRRWHVLGLGYDTNIDPRL 489 (534)
T ss_pred cCcEEEeHHHHHhhcHHH-HHHHHHH-hccccccccccccchHHHHHcC-------cceecChhheecccccccccchhh
Confidence 999987 4444444 6667776 333446799999994322 122 234444332 2 2 2211 1134
Q ss_pred CCceEEEeccccCCh--hhhHHHHHHHHHHHHhhhcc
Q 040326 231 MDTICTVRANCCDDT--ESKLHDLKLLLEDWRSFTKK 265 (285)
Q Consensus 231 ~~~~~~vHan~~~G~--~~K~~~lr~~l~dw~~~~~~ 265 (285)
...+.++|-|-..-- +.-+++.| ..|.+|...
T Consensus 490 i~~aaILHynG~~KPWl~~~i~~yr---~~W~kYl~~ 523 (534)
T PLN02742 490 IESAAVLHFNGNMKPWLKLAIERYK---PLWERYVNY 523 (534)
T ss_pred ccCCeEEEECCCCCcccccCCcccc---hHHHHHHcc
Confidence 567789997742111 11123344 367777663
No 28
>PLN02718 Probable galacturonosyltransferase
Probab=57.86 E-value=47 Score=34.07 Aligned_cols=151 Identities=9% Similarity=-0.009 Sum_probs=77.9
Q ss_pred hhhHHHHHHHHHHhcceEEEEeccEEEecCcccccCCCC--CeE-EecCCCCC--------------CCC-----C-CCC
Q 040326 102 PQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQVDCLK--EMT-IACDVYSD--------------DLQ-----N-ISY 158 (285)
Q Consensus 102 ~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~~~~a--Di~-~~~D~~~~--------------~~~-----~-~~~ 158 (285)
+..|+.+-. ++..==.||+.|+|||-..|--+.+.-+- -+. +..|+... +|. + ..-
T Consensus 405 ~y~Rl~ipe-llp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~C 483 (603)
T PLN02718 405 NHARFYLPD-IFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKAC 483 (603)
T ss_pred HHHHHHHHH-HhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCcc
Confidence 444554433 44421269999999999999877764321 111 22333211 000 0 123
Q ss_pred ccceEEEEEE-----eChhHHHHHHHHHHHHhcCCCCCChhhhhHHhh-ccccccCCCeEEEEeccCC--CC-Cccc--c
Q 040326 159 VKDGGFFYLK-----SNAITSEYFKYQDMTRILFPDSQNRTLCEETVV-NEELFETLSLRVNYMEQDR--YG-GFCQ--Q 227 (285)
Q Consensus 159 ~~NsGf~~~R-----~t~~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v-~~~~~~~~gl~v~~Ld~~~--F~-g~~~--~ 227 (285)
..|+|++.+- -..-|.. +..|.... .....+||.++|-.++ -. =++..||... .+ |+.. .
T Consensus 484 yfNsGVlLIDLk~WReenITe~-~~~~l~~n-~~~~l~dqdaLpp~LlvF~-------gri~~LD~rWNv~gLG~~~~i~ 554 (603)
T PLN02718 484 TWAFGMNLFDLEEWRRQKLTSV-YHKYLQLG-VKRPLWKAGSLPIGWLTFY-------NQTVALDKRWHVLGLGHESGVG 554 (603)
T ss_pred ccccceEEEeHHHHHhcChHHH-HHHHHHhc-cCccccCcccccHHHHHhc-------CceeecChHHhccCcccccccc
Confidence 4679999863 3444433 44565532 2225689999982111 11 1356666542 23 2211 1
Q ss_pred cCCCCceEEEeccccCC--hhhhHHHHHHHHHHHHhhhcc
Q 040326 228 NINMDTICTVRANCCDD--TESKLHDLKLLLEDWRSFTKK 265 (285)
Q Consensus 228 ~~d~~~~~~vHan~~~G--~~~K~~~lr~~l~dw~~~~~~ 265 (285)
..+...+.++|-|-..- .+.-+.+.| .-|.+|...
T Consensus 555 ~~~i~~aaIIHYnG~~KPWle~~i~~yr---~~W~k~v~~ 591 (603)
T PLN02718 555 ASDIEQAAVIHYDGVMKPWLDIGIGKYK---RYWNIHVPY 591 (603)
T ss_pred ccccCCCEEEEECCCCCccccCChhhHH---HHHHhhcCC
Confidence 23456788999774211 122345556 458888763
No 29
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=55.81 E-value=1.2e+02 Score=26.29 Aligned_cols=107 Identities=13% Similarity=0.187 Sum_probs=59.4
Q ss_pred cCCchHHHHHHHHhcCCCeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCCc---EE
Q 040326 8 KINNSLLQLLRRTTMQDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHPH---CF 84 (285)
Q Consensus 8 ~~~~~L~~ll~~~A~~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~~---c~ 84 (285)
.+-+.|+++|+.....+-.+.+=.=.... .+..+++..+.-++ .....++++|.+.|.+..+.+++..+. +|
T Consensus 80 ~~iptL~evl~~~~~~~~~l~iEiK~~~~-~~~~~~~~v~~~l~----~~~~~~~v~v~Sf~~~~l~~~~~~~p~~~~~~ 154 (220)
T cd08579 80 AKIPSLDEYLALAKGLKQKLLIELKPHGH-DSPDLVEKFVKLYK----QNLIENQHQVHSLDYRVIEKVKKLDPKIKTGY 154 (220)
T ss_pred CcCCCHHHHHHHhhccCCeEEEEECCCCC-CCHHHHHHHHHHHH----HcCCCcCeEEEeCCHHHHHHHHHHCCCCeEEE
Confidence 35689999999876322233333322221 22236666666665 123457899999999999999887553 23
Q ss_pred EeecC-c------ccccccccccchhhHHHHHHHHHHhcceEEEE
Q 040326 85 YLSNS-S------TRYTKKKQLSLPQLRNKFWQEVIELAYSVVFT 122 (285)
Q Consensus 85 ~~~~~-g------~~~~s~~~~~~~~~K~~~i~~vL~lGy~vl~s 122 (285)
..... + ..+-+..| ......+++.+-+.|..|..-
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~G~~v~~w 196 (220)
T cd08579 155 ILPFNIGNLPKTNVDFYSIEY---STLNKEFIRQAHQNGKKVYVW 196 (220)
T ss_pred EEecccCcccccCceEEeeeh---hhcCHHHHHHHHHCCCEEEEE
Confidence 33211 0 00001111 112346777777788876644
No 30
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=54.43 E-value=1e+02 Score=23.93 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=49.7
Q ss_pred eEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeCH--HHHHHHHHh---CCcEEEeecCccccccccccc
Q 040326 26 TVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDS--KAFQYCKTV---HPHCFYLSNSSTRYTKKKQLS 100 (285)
Q Consensus 26 tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~--~~~~~c~~~---~~~c~~~~~~g~~~~s~~~~~ 100 (285)
+||+.+-|. .+ .+...|+|++. .......++|+--.. ++.+.+++. +.+......+. ...
T Consensus 1 Svvip~~n~--~~---~l~~~l~sl~~---q~~~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~-------n~g 65 (169)
T PF00535_consen 1 SVVIPTYNE--AE---YLERTLESLLK---QTDPDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPE-------NLG 65 (169)
T ss_dssp EEEEEESS---TT---THHHHHHHHHH---HSGCEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCC-------CSH
T ss_pred CEEEEeeCC--HH---HHHHHHHHHhh---ccCCCEEEEEeccccccccccccccccccccccccccccc-------ccc
Confidence 588888888 35 88999999871 112234444443222 577778776 33433333221 001
Q ss_pred chhhHHHHHHHHHHhcceEEEEeccEEEecCcccc
Q 040326 101 LPQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQ 135 (285)
Q Consensus 101 ~~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~ 135 (285)
....+...+.. ..|-=+++.|.|.+|..+=+..
T Consensus 66 ~~~~~n~~~~~--a~~~~i~~ld~D~~~~~~~l~~ 98 (169)
T PF00535_consen 66 FSAARNRGIKH--AKGEYILFLDDDDIISPDWLEE 98 (169)
T ss_dssp HHHHHHHHHHH----SSEEEEEETTEEE-TTHHHH
T ss_pred ccccccccccc--cceeEEEEeCCCceEcHHHHHH
Confidence 12223333333 2344699999999997774443
No 31
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=49.61 E-value=1.3e+02 Score=26.29 Aligned_cols=80 Identities=13% Similarity=0.210 Sum_probs=44.8
Q ss_pred CeEEEEEeCccccCCcchHHHHHHHhccccccccc-cccEEEEEe--CHHHHHHHHHhCCcEEEeecCcccccc-ccccc
Q 040326 25 RTVIITMVGQEWASPGSVLDLFLESFCIGEETKHL-LNHLLIVAL--DSKAFQYCKTVHPHCFYLSNSSTRYTK-KKQLS 100 (285)
Q Consensus 25 ~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~--D~~~~~~c~~~~~~c~~~~~~g~~~~s-~~~~~ 100 (285)
|.+|++..| ||++...++.++. ..+ ..-.+|++- |..+.++|++.|+||+..+... +.+ ..|
T Consensus 3 ki~vl~sg~------gs~~~~ll~~~~~----~~~~~~I~~vvs~~~~~~~~~~a~~~gIp~~~~~~~~--~~~~~~~-- 68 (200)
T PRK05647 3 RIVVLASGN------GSNLQAIIDACAA----GQLPAEIVAVISDRPDAYGLERAEAAGIPTFVLDHKD--FPSREAF-- 68 (200)
T ss_pred eEEEEEcCC------ChhHHHHHHHHHc----CCCCcEEEEEEecCccchHHHHHHHcCCCEEEECccc--cCchhHh--
Confidence 345555554 3477888888762 222 333344444 3457788999999998865431 000 001
Q ss_pred chhhHHHHHHHHHHhcceEEEE
Q 040326 101 LPQLRNKFWQEVIELAYSVVFT 122 (285)
Q Consensus 101 ~~~~K~~~i~~vL~lGy~vl~s 122 (285)
-..++..+.+.+.|++++
T Consensus 69 ----~~~~~~~l~~~~~D~iv~ 86 (200)
T PRK05647 69 ----DAALVEALDAYQPDLVVL 86 (200)
T ss_pred ----HHHHHHHHHHhCcCEEEh
Confidence 123444455677777665
No 32
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=47.47 E-value=43 Score=31.86 Aligned_cols=95 Identities=18% Similarity=0.230 Sum_probs=50.9
Q ss_pred CCeEEEE-EeCccccCCcchHHHHHHHhccccccccc----cccEEEEEeCHHHHHHHHHh---CCcEEEeecCcccccc
Q 040326 24 DRTVIIT-MVGQEWASPGSVLDLFLESFCIGEETKHL----LNHLLIVALDSKAFQYCKTV---HPHCFYLSNSSTRYTK 95 (285)
Q Consensus 24 d~tVilt-~~n~~~~~~~s~l~~fl~s~r~g~~t~~l----~~~~lVvA~D~~~~~~c~~~---~~~c~~~~~~g~~~~s 95 (285)
+=||-|| ++-..|.. |++.|++|.. +.+ --++.|++-+.+..-.+.-. .+..+... ..
T Consensus 98 n~tIGL~vfA~GkY~~---fl~~Fl~SAe-----k~Fm~g~~V~YYVFTD~p~~vP~i~l~~~r~~~V~~v~------~~ 163 (337)
T PF03414_consen 98 NITIGLTVFATGKYIV---FLKDFLESAE-----KHFMVGHRVIYYVFTDQPSKVPRIELGPGRRLKVFEVQ------EE 163 (337)
T ss_dssp T-EEEEEEEE-CCHHH---HHHHHHHHHH-----HHBSTTSEEEEEEEES-GGGS------TTEEEEEEE-S------GG
T ss_pred CceEEEEEEecccHHH---HHHHHHHhHH-----HhccCCcEEEEEEEeCchhhCCccccCCCceeEEEEec------cc
Confidence 3344443 35567888 9999999964 333 34666777776654332211 11222221 12
Q ss_pred cccccchhhHHHHHHHHHH----hcceE-EEEeccEEEecCcc
Q 040326 96 KKQLSLPQLRNKFWQEVIE----LAYSV-VFTEVDVMWLRNPI 133 (285)
Q Consensus 96 ~~~~~~~~~K~~~i~~vL~----lGy~v-l~sDvDvVWlrnP~ 133 (285)
..+..++..|.+.+....+ ..+|. ++.|+|.++ +|++
T Consensus 164 ~~Wqd~sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F-~~~v 205 (337)
T PF03414_consen 164 KRWQDISMMRMEMISEHIEQHIQHEVDYLFCMDVDMVF-QDHV 205 (337)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE--S-B
T ss_pred CCCccchhHHHHHHHHHHHHHHhhcCCEEEEEecceEE-eccc
Confidence 4666777788888877543 45674 556999995 6664
No 33
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=45.83 E-value=2e+02 Score=24.98 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=43.3
Q ss_pred CCchHHHHHHHHhcCCCeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCCc
Q 040326 9 INNSLLQLLRRTTMQDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHPH 82 (285)
Q Consensus 9 ~~~~L~~ll~~~A~~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~~ 82 (285)
+-+.|+++|+.+..++-.+++=.=+..+. ..++.+..+.-++ ...+.+++++.+.|.++.+.+++..+.
T Consensus 87 ~iptL~evl~~~~~~~~~l~leiK~~~~~-~~~~~~~l~~~l~----~~~~~~~v~~~Sf~~~~l~~~~~~~p~ 155 (230)
T cd08563 87 KIPTLEEVLDLLKDKDLLLNIEIKTDVIH-YPGIEKKVLELVK----EYNLEDRVIFSSFNHESLKRLKKLDPK 155 (230)
T ss_pred cCCCHHHHHHHHHhcCcEEEEEECCCCCc-ChhHHHHHHHHHH----HcCCCCCEEEEcCCHHHHHHHHHHCCC
Confidence 35789999998763222233333222221 1125556666655 123568899999999999999998753
No 34
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=44.42 E-value=2.1e+02 Score=24.71 Aligned_cols=71 Identities=13% Similarity=0.186 Sum_probs=38.7
Q ss_pred chHHHHHHHhccccccccccccEEEE-Ee--CHHHHHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhcc
Q 040326 41 SVLDLFLESFCIGEETKHLLNHLLIV-AL--DSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELAY 117 (285)
Q Consensus 41 s~l~~fl~s~r~g~~t~~l~~~~lVv-A~--D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lGy 117 (285)
|.+...++.+.. ..+.-++.++ +- |..+.+++++.|++++..+... +.++. -.-..++..+.+.+.
T Consensus 12 s~~~~ll~~~~~----~~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~~~~~--~~~~~-----~~~~~~~~~l~~~~~ 80 (190)
T TIGR00639 12 SNLQAIIDACKE----GKIPASVVLVISNKPDAYGLERAAQAGIPTFVLSLKD--FPSRE-----AFDQAIIEELRAHEV 80 (190)
T ss_pred hhHHHHHHHHHc----CCCCceEEEEEECCccchHHHHHHHcCCCEEEECccc--cCchh-----hhhHHHHHHHHhcCC
Confidence 477778877762 2232334433 33 2444588999999998765431 11100 001245555666777
Q ss_pred eEEEE
Q 040326 118 SVVFT 122 (285)
Q Consensus 118 ~vl~s 122 (285)
|++++
T Consensus 81 D~iv~ 85 (190)
T TIGR00639 81 DLVVL 85 (190)
T ss_pred CEEEE
Confidence 77665
No 35
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=44.12 E-value=2.2e+02 Score=24.98 Aligned_cols=72 Identities=8% Similarity=0.089 Sum_probs=41.6
Q ss_pred cchHHHHHHHhccccccccc-cccEEEEEeCH--HHHHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhc
Q 040326 40 GSVLDLFLESFCIGEETKHL-LNHLLIVALDS--KAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELA 116 (285)
Q Consensus 40 ~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~D~--~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lG 116 (285)
||-+...+..++.| .+ ..-.+|++-.+ .+.++|++.|++++..+... +.++... =..++..+-+.+
T Consensus 10 Gsn~~al~~~~~~~----~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~~~~--~~~~~~~-----~~~~~~~l~~~~ 78 (207)
T PLN02331 10 GSNFRAIHDACLDG----RVNGDVVVVVTNKPGCGGAEYARENGIPVLVYPKTK--GEPDGLS-----PDELVDALRGAG 78 (207)
T ss_pred ChhHHHHHHHHHcC----CCCeEEEEEEEeCCCChHHHHHHHhCCCEEEecccc--CCCcccc-----hHHHHHHHHhcC
Confidence 34677788777622 23 34455666644 44789999999998765431 1111111 124455566667
Q ss_pred ceEEEE
Q 040326 117 YSVVFT 122 (285)
Q Consensus 117 y~vl~s 122 (285)
.|++++
T Consensus 79 ~Dliv~ 84 (207)
T PLN02331 79 VDFVLL 84 (207)
T ss_pred CCEEEE
Confidence 766665
No 36
>PF02484 Rhabdo_NV: Rhabdovirus Non-virion protein; InterPro: IPR003490 Infectious hematopoietic necrosis virus (IHNV) is a member of the family Rhabdoviridae. The non-virion protein (NV) is coded for by one of the six genes of the IHNV genome [], but is absent in vesiculovirus-like rhabdovirus [].
Probab=39.98 E-value=34 Score=26.28 Aligned_cols=31 Identities=16% Similarity=0.372 Sum_probs=22.5
Q ss_pred chhhHHHHHHHHHHhcceEEEEeccEEEecC
Q 040326 101 LPQLRNKFWQEVIELAYSVVFTEVDVMWLRN 131 (285)
Q Consensus 101 ~~~~K~~~i~~vL~lGy~vl~sDvDvVWlrn 131 (285)
|-..|-.+-+.+--.|+.+||-|.|+||-.+
T Consensus 10 ~~al~~~lryk~~va~hgflfddg~~vw~e~ 40 (111)
T PF02484_consen 10 MEALRDALRYKNEVARHGFLFDDGDIVWSED 40 (111)
T ss_pred HHHHHHHHHHHhhccccceEecCCcEEEecC
Confidence 4444555555555679999999999999664
No 37
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=34.50 E-value=2.8e+02 Score=23.22 Aligned_cols=97 Identities=12% Similarity=0.154 Sum_probs=53.8
Q ss_pred cCCchHHHHHHHHhcC----CCeEEEEEeCccccC-CcchHHHHHHHhcccccccc---ccccEEEEE------------
Q 040326 8 KINNSLLQLLRRTTMQ----DRTVIITMVGQEWAS-PGSVLDLFLESFCIGEETKH---LLNHLLIVA------------ 67 (285)
Q Consensus 8 ~~~~~L~~ll~~~A~~----d~tVilt~~n~~~~~-~~s~l~~fl~s~r~g~~t~~---l~~~~lVvA------------ 67 (285)
...+.|+++|+.+..- +..+++..=.+.-.. .-.+....+.-++. .. +.+++++..
T Consensus 57 ~~~ptl~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~i~sf~~~~~~~~~~~ 132 (179)
T cd08555 57 ILPPTLEEVLELIADYLKNPDYTIILSLEIKQDSPEYDEFLAKVLKELRV----YFDYDLRGKVVLSSFNALGVDYYNFS 132 (179)
T ss_pred CCCCCHHHHHHHHHhhhhcCCCceEEEEEeCCCCCcchHHHHHHHHHHHH----cCCcccCCCEEEEeecccCCChhccc
Confidence 3567888888877621 245555543332111 01144555544431 11 222333322
Q ss_pred ----eCHHHHHHHHHhCCcEEEeecCcccccccccccchhhH-HHHHHHHHHhcceEEEEe
Q 040326 68 ----LDSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLR-NKFWQEVIELAYSVVFTE 123 (285)
Q Consensus 68 ----~D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K-~~~i~~vL~lGy~vl~sD 123 (285)
.+++..+.+.+.|..++..... + +..++.++++|.+-++||
T Consensus 133 ~~~~~~~~~v~~~~~~g~~v~~wtvn---------------~~~~~~~~l~~~Gvd~i~TD 178 (179)
T cd08555 133 SKLIKDTELIASANKLGLLSRIWTVN---------------DNNEIINKFLNLGVDGLITD 178 (179)
T ss_pred chhhcCHHHHHHHHHCCCEEEEEeeC---------------ChHHHHHHHHHcCCCEEeCC
Confidence 3555556666666666555443 3 778889999999999988
No 38
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=33.31 E-value=37 Score=32.46 Aligned_cols=36 Identities=17% Similarity=0.318 Sum_probs=30.0
Q ss_pred cccccccccchhhHHHHHHHHHHhcce-EEEEeccEE
Q 040326 92 RYTKKKQLSLPQLRNKFWQEVIELAYS-VVFTEVDVM 127 (285)
Q Consensus 92 ~~~s~~~~~~~~~K~~~i~~vL~lGy~-vl~sDvDvV 127 (285)
++|.+.|++-+-.-+.++-.+-..|++ |+|.|||.+
T Consensus 191 Q~g~~~FNRakL~NVGf~eAlkd~~wdCfIFHDVDll 227 (372)
T KOG3916|consen 191 QAGNKPFNRAKLLNVGFLEALKDYGWDCFIFHDVDLL 227 (372)
T ss_pred ecCCCcccHHHhhhhHHHHHHHhcCCCEEEEeccccc
Confidence 677888988777777777777779999 889999997
No 39
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=33.30 E-value=3.5e+02 Score=24.14 Aligned_cols=103 Identities=11% Similarity=0.075 Sum_probs=59.2
Q ss_pred CCchHHHHHHHHhcCCCeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeCH-HHHHHHHHhCCc-----
Q 040326 9 INNSLLQLLRRTTMQDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDS-KAFQYCKTVHPH----- 82 (285)
Q Consensus 9 ~~~~L~~ll~~~A~~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~-~~~~~c~~~~~~----- 82 (285)
+-+.|+++|+.+. ++..+.-=.-... .++.+..+.-++ ...+.++++|.+.|. +..+.|++..+.
T Consensus 106 ~iptL~evl~~~~--~~~~l~iEiK~~~---~~~~~~v~~~l~----~~~~~~~v~i~SF~~~~~l~~~~~~~~~~~~~~ 176 (265)
T cd08564 106 KIPTLEDVLVTFK--DKLKYNIELKGRE---VGLGERVLNLVE----KYGMILQVHFSSFLHYDRLDLLKALRPNKLNVP 176 (265)
T ss_pred cCCCHHHHHHHhc--cCcEEEEEeCCCc---hhHHHHHHHHHH----HcCCCCCEEEEecCchhHHHHHHHhCcCCCCce
Confidence 4579999999876 2322221111111 125666666665 233468899999999 999999887654
Q ss_pred -EEEeecCc----c-------ccccccc-ccchhhHHHHHHHHHHhcceEE
Q 040326 83 -CFYLSNSS----T-------RYTKKKQ-LSLPQLRNKFWQEVIELAYSVV 120 (285)
Q Consensus 83 -c~~~~~~g----~-------~~~s~~~-~~~~~~K~~~i~~vL~lGy~vl 120 (285)
++...... . ..+-... ....+....++..+.+.|..|.
T Consensus 177 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~Gl~v~ 227 (265)
T cd08564 177 IALLFNEVKSPSPLDFLEQAKYYNATWVNFSYDFWTEEFVKKAHENGLKVM 227 (265)
T ss_pred EEEEecCCCCcccccHHHHHHhcCCceeeechhhhhHHHHHHHHHcCCEEE
Confidence 33332211 0 0110000 0123346788899999999875
No 40
>PLN02769 Probable galacturonosyltransferase
Probab=30.93 E-value=6.3e+02 Score=26.29 Aligned_cols=139 Identities=12% Similarity=-0.003 Sum_probs=69.3
Q ss_pred ccccccccc-hhhHHHHHHHHHHhcceEEEEeccEEEecCcccccCCCC--CeEEe-cCCCC--C--------CCCC-CC
Q 040326 93 YTKKKQLSL-PQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQVDCLK--EMTIA-CDVYS--D--------DLQN-IS 157 (285)
Q Consensus 93 ~~s~~~~~~-~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~~~~a--Di~~~-~D~~~--~--------~~~~-~~ 157 (285)
+.++.|..+ ...|+. |=+++..==.||+.|.|||-.+|--+.+.-+- -+... .|+.. + ...+ ..
T Consensus 429 ~~~~eyiS~~nh~Rfy-IPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~ 507 (629)
T PLN02769 429 QMRTEYLSVFSHSHFL-LPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNS 507 (629)
T ss_pred ccCcccccHHHHHHHH-HHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCccc
Confidence 334555444 335554 44455521269999999999999877775321 12222 23211 0 0001 12
Q ss_pred CccceEEEEEE-----eChhHHHHHHHHHHHHhc-CCCCCChhhhhHH-hhccccccCCCeEEEEeccCC-CC--Cccc-
Q 040326 158 YVKDGGFFYLK-----SNAITSEYFKYQDMTRIL-FPDSQNRTLCEET-VVNEELFETLSLRVNYMEQDR-YG--GFCQ- 226 (285)
Q Consensus 158 ~~~NsGf~~~R-----~t~~t~~~~~~w~~~~~~-~~~~~DQ~~fn~~-~v~~~~~~~~gl~v~~Ld~~~-F~--g~~~- 226 (285)
...|+|++++- -..-|..++ .|.+.... ....++|.++|-. ++-. =++..||... +. |...
T Consensus 508 CyFNSGVLLINL~~WRk~nITe~~~-~~~~~~~~~~~~~~~~~~Lp~lnlvF~-------g~v~~LD~rWNv~gLG~~~~ 579 (629)
T PLN02769 508 CAWMSGLNVIDLDKWRELDVTETYL-KLLQKFSKDGEESLRAAALPASLLTFQ-------DLIYPLDDRWVLSGLGHDYG 579 (629)
T ss_pred cccccCeeEeeHHHHHHhCHHHHHH-HHHHHhhhcccccccccCcCHHHHHhc-------CeEEECCHHHcccccccccc
Confidence 34699999974 334444443 34332222 2244666666621 1211 1466666543 22 2211
Q ss_pred -ccCCCCceEEEecc
Q 040326 227 -QNINMDTICTVRAN 240 (285)
Q Consensus 227 -~~~d~~~~~~vHan 240 (285)
.......+.++|-|
T Consensus 580 i~~~~i~~paIIHYn 594 (629)
T PLN02769 580 IDEQAIKKAAVLHYN 594 (629)
T ss_pred ccccccCCcEEEEEC
Confidence 12335578999976
No 41
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=30.09 E-value=2.3e+02 Score=22.18 Aligned_cols=73 Identities=7% Similarity=0.108 Sum_probs=46.0
Q ss_pred cccCCchHHHHHHHHhcCC-CeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEe---CHHHHHHHHHhCC
Q 040326 6 KIKINNSLLQLLRRTTMQD-RTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVAL---DSKAFQYCKTVHP 81 (285)
Q Consensus 6 ~~~~~~~L~~ll~~~A~~d-~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~---D~~~~~~c~~~~~ 81 (285)
..+++.+.+++++.+...+ ..|.+...+..+.. .+..+++.++ +.+.+++.|++- =++..+...+.|+
T Consensus 32 ~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~---~~~~~~~~L~-----~~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 32 YTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMT---LFPEVIELLR-----ELGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred ECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHH---HHHHHHHHHH-----hcCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 4556777788877776444 45666667666666 7888888887 344434443333 3444677778887
Q ss_pred cEEEe
Q 040326 82 HCFYL 86 (285)
Q Consensus 82 ~c~~~ 86 (285)
..|..
T Consensus 104 d~~~~ 108 (122)
T cd02071 104 AEIFG 108 (122)
T ss_pred CEEEC
Confidence 65444
No 42
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=28.64 E-value=1.9e+02 Score=23.92 Aligned_cols=93 Identities=10% Similarity=0.137 Sum_probs=45.9
Q ss_pred EEEEEeCccccCCcchHHHHHHHhcccccccccc-ccEEEEE--eCHHHHHHHHHhCCcE--EEeec-Cccccccccccc
Q 040326 27 VIITMVGQEWASPGSVLDLFLESFCIGEETKHLL-NHLLIVA--LDSKAFQYCKTVHPHC--FYLSN-SSTRYTKKKQLS 100 (285)
Q Consensus 27 Vilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~-~~~lVvA--~D~~~~~~c~~~~~~c--~~~~~-~g~~~~s~~~~~ 100 (285)
||+.+-|.. + .+...|+|+.. .... ..++|+- .++++.+.+++.+... ..... +.. .
T Consensus 1 viI~~~n~~--~---~l~~~l~sl~~----q~~~~~eiiivD~~s~d~t~~~~~~~~~~~~i~~~~~~~n~--------g 63 (202)
T cd04185 1 AVVVTYNRL--D---LLKECLDALLA----QTRPPDHIIVIDNASTDGTAEWLTSLGDLDNIVYLRLPENL--------G 63 (202)
T ss_pred CEEEeeCCH--H---HHHHHHHHHHh----ccCCCceEEEEECCCCcchHHHHHHhcCCCceEEEECcccc--------c
Confidence 355555654 3 78888889861 1121 2333332 1234666676665321 12211 111 0
Q ss_pred chhhHHHHHHHHHHhcce-EEEEeccEEEecCccccc
Q 040326 101 LPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQV 136 (285)
Q Consensus 101 ~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~ 136 (285)
....+...+...++.+++ ++|.|.|.++-.+-+..+
T Consensus 64 ~~~~~n~~~~~a~~~~~d~v~~ld~D~~~~~~~l~~l 100 (202)
T cd04185 64 GAGGFYEGVRRAYELGYDWIWLMDDDAIPDPDALEKL 100 (202)
T ss_pred hhhHHHHHHHHHhccCCCEEEEeCCCCCcChHHHHHH
Confidence 111223333433444554 788999999866555544
No 43
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=25.44 E-value=2.9e+02 Score=21.30 Aligned_cols=58 Identities=7% Similarity=0.043 Sum_probs=40.2
Q ss_pred CCCeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCCcEEEeecC
Q 040326 23 QDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHPHCFYLSNS 89 (285)
Q Consensus 23 ~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~ 89 (285)
..+.+++....++... -+..-++..+ +.+. .++.++-+.+..+.|.+.|.+|+..+.+
T Consensus 42 ~~~dl~I~iS~SG~t~---e~i~~~~~a~-----~~g~-~iI~IT~~~~l~~~~~~~~~~~~~~p~~ 99 (119)
T cd05017 42 DRKTLVIAVSYSGNTE---ETLSAVEQAK-----ERGA-KIVAITSGGKLLEMAREHGVPVIIIPKG 99 (119)
T ss_pred CCCCEEEEEECCCCCH---HHHHHHHHHH-----HCCC-EEEEEeCCchHHHHHHHcCCcEEECCCC
Confidence 4567777788877665 4555556655 3333 5667777888888898888888887553
No 44
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=25.43 E-value=2.7e+02 Score=20.30 Aligned_cols=78 Identities=14% Similarity=0.231 Sum_probs=44.4
Q ss_pred chHHHHHHHhccccccccccccEEEEEe--CHHHHHHHHHhC-CcEEEeecCcccccccccccchhhHHHHHHHHHH--h
Q 040326 41 SVLDLFLESFCIGEETKHLLNHLLIVAL--DSKAFQYCKTVH-PHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIE--L 115 (285)
Q Consensus 41 s~l~~fl~s~r~g~~t~~l~~~~lVvA~--D~~~~~~c~~~~-~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~--l 115 (285)
.++.-||...+ ..++++++|+-- ++++.+.|++.. +..+....+ |.. .. ........+++ .
T Consensus 5 ~~L~~wl~~~~-----~lG~d~i~i~d~~s~D~t~~~l~~~~~v~i~~~~~~---~~~-~~-----~~~~~~~~~~~~~~ 70 (97)
T PF13704_consen 5 DYLPEWLAHHL-----ALGVDHIYIYDDGSTDGTREILRALPGVGIIRWVDP---YRD-ER-----RQRAWRNALIERAF 70 (97)
T ss_pred HHHHHHHHHHH-----HcCCCEEEEEECCCCccHHHHHHhCCCcEEEEeCCC---ccc-hH-----HHHHHHHHHHHhCC
Confidence 38889999875 556899888633 356788888773 222222211 111 11 11222222332 2
Q ss_pred cce-EEEEeccEEEecCc
Q 040326 116 AYS-VVFTEVDVMWLRNP 132 (285)
Q Consensus 116 Gy~-vl~sDvDvVWlrnP 132 (285)
+.+ +++.|+|=++.-+|
T Consensus 71 ~~dWvl~~D~DEfl~~~~ 88 (97)
T PF13704_consen 71 DADWVLFLDADEFLVPPP 88 (97)
T ss_pred CCCEEEEEeeeEEEecCC
Confidence 445 88899998877665
No 45
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=25.15 E-value=1.5e+02 Score=27.42 Aligned_cols=46 Identities=9% Similarity=0.047 Sum_probs=30.7
Q ss_pred cchHHHHHHHhccccccccc-cccEEEEEeCHHHHHHHHHhCCcEEEeecC
Q 040326 40 GSVLDLFLESFCIGEETKHL-LNHLLIVALDSKAFQYCKTVHPHCFYLSNS 89 (285)
Q Consensus 40 ~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~ 89 (285)
||=++..++..+.| .+ .+=.+|++--+.+...+++.|++|+..+..
T Consensus 100 gsnl~al~~~~~~~----~~~~~i~~visn~~~~~~lA~~~gIp~~~~~~~ 146 (286)
T PRK06027 100 DHCLGDLLWRWRSG----ELPVEIAAVISNHDDLRSLVERFGIPFHHVPVT 146 (286)
T ss_pred CCCHHHHHHHHHcC----CCCcEEEEEEEcChhHHHHHHHhCCCEEEeccC
Confidence 55677788776622 22 344455565557888889999999987543
No 46
>PF13653 GDPD_2: Glycerophosphoryl diester phosphodiesterase family; PDB: 3RLG_A 2F9R_B 1XX1_A 3RLH_A.
Probab=24.64 E-value=81 Score=19.05 Aligned_cols=20 Identities=20% Similarity=0.529 Sum_probs=16.0
Q ss_pred hHHHHHHHHHHhcceEEEEe
Q 040326 104 LRNKFWQEVIELAYSVVFTE 123 (285)
Q Consensus 104 ~K~~~i~~vL~lGy~vl~sD 123 (285)
.+...++.+|.+|.+-+.||
T Consensus 8 d~~~~~~~~l~~GVDgI~Td 27 (30)
T PF13653_consen 8 DKPASWRELLDLGVDGIMTD 27 (30)
T ss_dssp -SHHHHHHHHHHT-SEEEES
T ss_pred CCHHHHHHHHHcCCCEeeCC
Confidence 45778899999999999987
No 47
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=24.50 E-value=1.1e+02 Score=24.50 Aligned_cols=90 Identities=8% Similarity=0.137 Sum_probs=55.8
Q ss_pred cchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHH---hc
Q 040326 40 GSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIE---LA 116 (285)
Q Consensus 40 ~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~---lG 116 (285)
.+|++.-++.++ ....++++|++-+++.++.+...++.++.....+. |. ..-++..++ ..
T Consensus 24 ~~li~~~l~~l~-----~~~~~~Ivvv~~~~~~~~~~~~~~~~~v~~~~~~~--G~----------~~sl~~a~~~~~~~ 86 (160)
T PF12804_consen 24 KPLIERVLEALR-----EAGVDDIVVVTGEEEIYEYLERYGIKVVVDPEPGQ--GP----------LASLLAALSQLPSS 86 (160)
T ss_dssp EEHHHHHHHHHH-----HHTESEEEEEESTHHHHHHHTTTTSEEEE-STSSC--SH----------HHHHHHHHHTSTTS
T ss_pred ccHHHHHHHHhh-----ccCCceEEEecChHHHHHHHhccCceEEEeccccC--Ch----------HHHHHHHHHhcccC
Confidence 458888888886 44579999999998888888888888877754311 00 111222222 35
Q ss_pred ceEEEEeccEEEec-CcccccC-----CCCCeEEec
Q 040326 117 YSVVFTEVDVMWLR-NPILQVD-----CLKEMTIAC 146 (285)
Q Consensus 117 y~vl~sDvDvVWlr-nP~~~~~-----~~aDi~~~~ 146 (285)
=.|++.-+|+.|+. +-+..+. ...|+++.+
T Consensus 87 ~~vlv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~ 122 (160)
T PF12804_consen 87 EPVLVLPCDQPFLSPELLRRLLEALEKSPADIVVPV 122 (160)
T ss_dssp SEEEEEETTETTS-HHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCcEEEeCCccccCHHHHHHHHHHHhccCCcEEEEE
Confidence 67999999997744 2233321 245776654
No 48
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=24.26 E-value=3e+02 Score=23.64 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=50.6
Q ss_pred eEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEe--CHHHHHHHHHhCCcEEEeecCcccccccccccchh
Q 040326 26 TVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVAL--DSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQ 103 (285)
Q Consensus 26 tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~--D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~ 103 (285)
+||+.+-|.+ + .+...|+|+. ...+.++|+-- .+.|.+.+++.+...+.....| + ..
T Consensus 3 svii~~~Ne~--~---~l~~~l~sl~------~~~~eiivvD~gStD~t~~i~~~~~~~v~~~~~~g--~--------~~ 61 (229)
T cd02511 3 SVVIITKNEE--R---NIERCLESVK------WAVDEIIVVDSGSTDRTVEIAKEYGAKVYQRWWDG--F--------GA 61 (229)
T ss_pred EEEEEeCCcH--H---HHHHHHHHHh------cccCEEEEEeCCCCccHHHHHHHcCCEEEECCCCC--h--------HH
Confidence 4677777766 3 7888899986 12245555531 2457788887776655442221 1 11
Q ss_pred hHHHHHHHHHHhcceEEEEeccEEEecCccccc
Q 040326 104 LRNKFWQEVIELAYSVVFTEVDVMWLRNPILQV 136 (285)
Q Consensus 104 ~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~ 136 (285)
.+...+.. ..|==|++.|+|-++-.+.++.+
T Consensus 62 ~~n~~~~~--a~~d~vl~lDaD~~~~~~~~~~l 92 (229)
T cd02511 62 QRNFALEL--ATNDWVLSLDADERLTPELADEI 92 (229)
T ss_pred HHHHHHHh--CCCCEEEEEeCCcCcCHHHHHHH
Confidence 22222221 23446889999998765555544
No 49
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=23.41 E-value=4.7e+02 Score=23.77 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=50.8
Q ss_pred hHHHHHHHhccccccccccccEEEEEeCH----HHHHHHHHh-CCcEEEeecCcccccccccccchhhHHHHHHHHHHhc
Q 040326 42 VLDLFLESFCIGEETKHLLNHLLIVALDS----KAFQYCKTV-HPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELA 116 (285)
Q Consensus 42 ~l~~fl~s~r~g~~t~~l~~~~lVvA~D~----~~~~~c~~~-~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lG 116 (285)
.+...|+++. ........|+..|. .+.+.+++. .+........+..-...+++ ..+...+..|
T Consensus 17 ~l~~~l~~l~-----~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~~~~NlG~agg~n-------~g~~~a~~~~ 84 (305)
T COG1216 17 DLVECLASLA-----AQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIENGENLGFAGGFN-------RGIKYALAKG 84 (305)
T ss_pred HHHHHHHHHh-----cCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEEcCCCccchhhhh-------HHHHHHhcCC
Confidence 7888888886 33323333335554 444555665 45665665543322233443 6778888999
Q ss_pred ce-EEEEeccEEEecCccccc
Q 040326 117 YS-VVFTEVDVMWLRNPILQV 136 (285)
Q Consensus 117 y~-vl~sDvDvVWlrnP~~~~ 136 (285)
++ +++.+-|++.-.|=+.-+
T Consensus 85 ~~~~l~LN~D~~~~~~~l~~l 105 (305)
T COG1216 85 DDYVLLLNPDTVVEPDLLEEL 105 (305)
T ss_pred CcEEEEEcCCeeeChhHHHHH
Confidence 98 999999988755544443
No 50
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=21.77 E-value=1.9e+02 Score=26.89 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=41.4
Q ss_pred cchHHHHHHHhccccccccc-cccEEEEEeCHHHHHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhcce
Q 040326 40 GSVLDLFLESFCIGEETKHL-LNHLLIVALDSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELAYS 118 (285)
Q Consensus 40 ~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lGy~ 118 (285)
||=+...+...+.| .+ .+=.+|++--+.+.+++++.|+|++..+.... ++. -.-..++..+.+.+.+
T Consensus 104 g~nl~al~~~~~~~----~l~~~i~~visn~~~~~~~A~~~gIp~~~~~~~~~---~~~-----~~~~~~~~~l~~~~~D 171 (289)
T PRK13010 104 DHCLNDLLYRWRMG----ELDMDIVGIISNHPDLQPLAVQHDIPFHHLPVTPD---TKA-----QQEAQILDLIETSGAE 171 (289)
T ss_pred CccHHHHHHHHHCC----CCCcEEEEEEECChhHHHHHHHcCCCEEEeCCCcc---ccc-----chHHHHHHHHHHhCCC
Confidence 33566677776622 23 45555666666889999999999998754311 100 0112345556666666
Q ss_pred EEEE
Q 040326 119 VVFT 122 (285)
Q Consensus 119 vl~s 122 (285)
++++
T Consensus 172 livl 175 (289)
T PRK13010 172 LVVL 175 (289)
T ss_pred EEEE
Confidence 5554
No 51
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=21.43 E-value=3.7e+02 Score=21.15 Aligned_cols=65 Identities=8% Similarity=0.038 Sum_probs=42.0
Q ss_pred CCCeEEEEEeCccccCCcchHHHHHHHhccccccccc---cccEEEEEeCHHHHHHHHHhCCcEEEeecC
Q 040326 23 QDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHL---LNHLLIVALDSKAFQYCKTVHPHCFYLSNS 89 (285)
Q Consensus 23 ~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l---~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~ 89 (285)
..+.+++|+.-.--.++...+..|++.+... ++.++ ...++- .+.++..+.|++.+.|-+..+.+
T Consensus 41 ~~gElvlttg~~~~~~~~~~~~~~i~~L~~~-~~agL~i~~~~~~~-~iP~~~i~~A~~~~lPli~ip~~ 108 (123)
T PF07905_consen 41 RGGELVLTTGYALRDDDEEELREFIRELAEK-GAAGLGIKTGRYLD-EIPEEIIELADELGLPLIEIPWE 108 (123)
T ss_pred CCCeEEEECCcccCCCCHHHHHHHHHHHHHC-CCeEEEEeccCccc-cCCHHHHHHHHHcCCCEEEeCCC
Confidence 5788888875433221223588889888621 12222 222322 78899999999999998888764
No 52
>COG1438 ArgR Arginine repressor [Transcription]
Probab=21.27 E-value=2.2e+02 Score=23.97 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=42.9
Q ss_pred HHHHHHHhcCCCeEEEEEeCccccCCcchHHHHHHHhccc--cccccccccEEEEEeCHHHHHHHHHh
Q 040326 14 LQLLRRTTMQDRTVIITMVGQEWASPGSVLDLFLESFCIG--EETKHLLNHLLIVALDSKAFQYCKTV 79 (285)
Q Consensus 14 ~~ll~~~A~~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g--~~t~~l~~~~lVvA~D~~~~~~c~~~ 79 (285)
.+++-.+- .++.+|+--++-+.++ .+-++|.++..- .||-.+-+-.+|+|-|+++.+.|.+.
T Consensus 82 ~~~v~~vd-~~~~~ivlkT~PG~A~---~ia~~lD~~~~~eIlGTIaGdDTilVi~r~~~~a~~l~~~ 145 (150)
T COG1438 82 KDLVLSID-RNGNLIVLKTSPGAAQ---LIARLLDSLAKDEILGTIAGDDTILVICRSEETAKELYEE 145 (150)
T ss_pred HHHheeec-cCCcEEEEEeCCchHH---HHHHHHHhcCchhhheeeeCCCeEEEEecCchhHHHHHHH
Confidence 34444454 4566666666667777 888888886531 23556688999999999998887653
No 53
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=20.90 E-value=1.9e+02 Score=22.25 Aligned_cols=22 Identities=14% Similarity=0.176 Sum_probs=16.2
Q ss_pred hcceEEEEeccEEEecCccccc
Q 040326 115 LAYSVVFTEVDVMWLRNPILQV 136 (285)
Q Consensus 115 lGy~vl~sDvDvVWlrnP~~~~ 136 (285)
.|=-|+|.|.|..|-.+-+..+
T Consensus 78 ~~~~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 78 KGDIVVVLDADTILEPDALKRL 99 (180)
T ss_pred CCCEEEEECCCCCcChHHHHHH
Confidence 3445899999998866656555
No 54
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=20.77 E-value=4.9e+02 Score=22.38 Aligned_cols=55 Identities=13% Similarity=0.225 Sum_probs=38.0
Q ss_pred ccccEEEEEeCHHHH-----HHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhcceEEEEeccE
Q 040326 59 LLNHLLIVALDSKAF-----QYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELAYSVVFTEVDV 126 (285)
Q Consensus 59 l~~~~lVvA~D~~~~-----~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lGy~vl~sDvDv 126 (285)
+++.++-.+.+.+.. +.|.+.|+.++.. -|+. ..-.+++++++.|+.++++=++.
T Consensus 88 g~~~vv~G~i~sd~~~~~~e~~~~~~gl~~~~P-----LW~~--------~~~~ll~e~~~~g~~~~iv~v~~ 147 (194)
T cd01994 88 GVDAVVFGAILSEYQRTRVERVCERLGLEPLAP-----LWGR--------DQEELLREMIEAGFKAIIIKVAA 147 (194)
T ss_pred CCCEEEECccccHHHHHHHHHHHHHcCCEEEec-----ccCC--------CHHHHHHHHHHcCCeEEEEEecc
Confidence 577777777765544 4488888766544 2222 23569999999999999976665
No 55
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=20.77 E-value=4.4e+02 Score=23.06 Aligned_cols=55 Identities=13% Similarity=0.240 Sum_probs=36.9
Q ss_pred ccccEEEEEeCHHH-----HHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhcceEEEEeccE
Q 040326 59 LLNHLLIVALDSKA-----FQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELAYSVVFTEVDV 126 (285)
Q Consensus 59 l~~~~lVvA~D~~~-----~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lGy~vl~sDvDv 126 (285)
+++.++..+.+.+- ...|.+.++.++..-- .+.|-.+++++++.|+..+++-++.
T Consensus 86 g~~~vv~G~i~sd~~~~~~e~v~~~~gl~~~~PLw-------------~~~~~el~~~~~~~G~~~~i~~v~~ 145 (218)
T TIGR03679 86 GVEGIVTGAIASRYQKSRIERICEELGLKVFAPLW-------------GRDQEEYLRELVERGFRFIIVSVSA 145 (218)
T ss_pred CCCEEEECCcccHhHHHHHHHHHHhCCCeEEeehh-------------cCCHHHHHHHHHHCCCEEEEEEEec
Confidence 67777776665432 1345556665544321 2367889999999999999987765
No 56
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=20.18 E-value=1.9e+02 Score=26.10 Aligned_cols=23 Identities=13% Similarity=0.076 Sum_probs=17.5
Q ss_pred hcceEEEEeccEEEecCcccccC
Q 040326 115 LAYSVVFTEVDVMWLRNPILQVD 137 (285)
Q Consensus 115 lGy~vl~sDvDvVWlrnP~~~~~ 137 (285)
.|==|+|.|+|+++-.+.+..+.
T Consensus 88 ~~d~l~flD~D~i~~~~~i~~~~ 110 (281)
T PF10111_consen 88 RGDYLIFLDADCIPSPDFIEKLL 110 (281)
T ss_pred CCCEEEEEcCCeeeCHHHHHHHH
Confidence 56669999999999666665543
Done!