Query 040326
Match_columns 285
No_of_seqs 143 out of 335
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 11:36:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040326.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040326hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ll2_A Glycogenin-1; protein-s 97.9 0.00011 3.7E-09 68.1 12.3 152 26-198 5-169 (333)
2 3u2u_A Glycogenin-1, GN-1, GN1 97.8 0.00017 5.7E-09 64.7 11.6 148 31-198 11-170 (263)
3 1g9r_A Glycosyl transferase; a 97.4 0.0019 6.3E-08 58.8 12.2 175 28-219 3-206 (311)
4 3tzt_A Glycosyl transferase fa 96.6 0.011 3.6E-07 53.0 9.7 175 28-218 8-210 (276)
5 2c0n_A A197; thermophil protei 64.7 6 0.0002 33.6 4.0 89 72-169 17-125 (203)
6 3ioh_A Histo-blood group ABO s 45.3 61 0.0021 29.1 7.4 101 16-131 48-163 (298)
7 2pz0_A Glycerophosphoryl diest 42.7 1.5E+02 0.0052 24.9 11.2 68 9-81 98-165 (252)
8 1o7q_A N-acetyllactosaminide a 39.9 48 0.0016 29.6 5.8 174 24-221 47-259 (289)
9 4ayl_A BOGT-metal-independent 29.2 42 0.0014 29.3 3.6 102 29-145 6-120 (246)
10 1qg8_A Protein (spore coat pol 26.5 2.5E+02 0.0087 22.6 9.4 107 26-145 4-124 (255)
11 3kcq_A Phosphoribosylglycinami 24.6 2.7E+02 0.0094 23.3 7.9 67 40-122 19-88 (215)
12 3ks6_A Glycerophosphoryl diest 23.4 2.7E+02 0.0091 23.4 7.8 70 8-81 83-153 (250)
13 4ds3_A Phosphoribosylglycinami 23.3 3.1E+02 0.011 22.8 8.0 71 40-122 18-92 (209)
14 3bcv_A Putative glycosyltransf 21.4 2.8E+02 0.0097 22.0 7.4 100 26-145 8-119 (240)
No 1
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=97.89 E-value=0.00011 Score=68.08 Aligned_cols=152 Identities=15% Similarity=0.156 Sum_probs=89.7
Q ss_pred eEEEEEeCccccCCcchHHHHHHHhccccccccc-cccEEEEEeC---HHHHHHHHHhCCcEEEeecCccc------ccc
Q 040326 26 TVIITMVGQEWASPGSVLDLFLESFCIGEETKHL-LNHLLIVALD---SKAFQYCKTVHPHCFYLSNSSTR------YTK 95 (285)
Q Consensus 26 tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~D---~~~~~~c~~~~~~c~~~~~~g~~------~~s 95 (285)
.-|+.++|.+|+. -+..-+.|++ +.. -..++|+..| ++..+.+++.+........-... ...
T Consensus 5 a~vt~~~d~~Yl~---~a~vl~~SL~-----~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~ 76 (333)
T 1ll2_A 5 AFVTLTTNDAYAK---GALVLGSSLK-----QHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMK 76 (333)
T ss_dssp EEEEEESSHHHHH---HHHHHHHHHH-----HTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHH
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHH-----HhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhccccc
Confidence 3444457888887 6677778886 222 2345555443 56667777777554444321110 001
Q ss_pred cccccchhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCCCCeEEecCCCCCCCCCCCCccceEEEEEEeChhHH
Q 040326 96 KKQLSLPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCLKEMTIACDVYSDDLQNISYVKDGGFFYLKSNAITS 174 (285)
Q Consensus 96 ~~~~~~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~aDi~~~~D~~~~~~~~~~~~~NsGf~~~R~t~~t~ 174 (285)
......++.|..+.. + ..|+ ||+.|+|++.++|+-+.|.-+ .+...-|. ..+..+|+|+|.++++..+
T Consensus 77 ~~~~~~t~~Kl~i~~-l--~~ydrvlYLDaD~lv~~di~eLf~~~-~~aAv~d~------~~~~~fNsGvmlin~~~~~- 145 (333)
T 1ll2_A 77 RPELGVTLTKLHCWS-L--TQYSKCVFMDADTLVLANIDDLFERE-ELSAAPDP------GWPDCFNSGVFVYQPSVET- 145 (333)
T ss_dssp CGGGHHHHHHGGGGG-C--TTCSEEEEECTTEEECSCCGGGGGSC-SSEEEECS------SSTTSEEEEEEEECCCHHH-
T ss_pred ccchHHHHHHHHHhH-h--cCCCeEEEEeCCEEeccCHHHHhCCC-ceeEEecC------CCCcceeeeEEEEeCCHHH-
Confidence 122345666666554 2 3444 999999999999998888644 33333342 1246799999999997544
Q ss_pred HHHHHHHHHHhcCC--CCCChhhhhH
Q 040326 175 EYFKYQDMTRILFP--DSQNRTLCEE 198 (285)
Q Consensus 175 ~~~~~w~~~~~~~~--~~~DQ~~fn~ 198 (285)
++.+.+...... ...||.++|.
T Consensus 146 --~~~l~~~~~~~~~~~~~DQ~~LN~ 169 (333)
T 1ll2_A 146 --YNQLLHVASEQGSFDGGDQGLLNT 169 (333)
T ss_dssp --HHHHHHHHHHTCCTTSSHHHHHHH
T ss_pred --HHHHHHHHHhcCCCCCCCHHHHHH
Confidence 333333211111 3479999994
No 2
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=97.80 E-value=0.00017 Score=64.73 Aligned_cols=148 Identities=16% Similarity=0.167 Sum_probs=89.8
Q ss_pred EeCccccCCcchHHHHHHHhccccccccc-cccEEEEE---eCHHHHHHHHHhCCcEEEeecCcc------c-ccccccc
Q 040326 31 MVGQEWASPGSVLDLFLESFCIGEETKHL-LNHLLIVA---LDSKAFQYCKTVHPHCFYLSNSST------R-YTKKKQL 99 (285)
Q Consensus 31 ~~n~~~~~~~s~l~~fl~s~r~g~~t~~l-~~~~lVvA---~D~~~~~~c~~~~~~c~~~~~~g~------~-~~s~~~~ 99 (285)
.+|.+|+. -+...+.|++ +.. -..++|+. ++++..+.+++.+......+.-.. . ...+. .
T Consensus 11 ~td~~Yl~---ga~vL~~SL~-----~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~-~ 81 (263)
T 3u2u_A 11 TTNDAYAK---GALVLGSSLK-----QHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPE-L 81 (263)
T ss_dssp ESSHHHHH---HHHHHHHHHH-----HTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTT-G
T ss_pred EECHHHHH---HHHHHHHHHH-----HhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcc-h
Confidence 46788887 6777778887 222 12334443 355777788888765544432110 1 11222 2
Q ss_pred cchhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCCCCeEEecCCCCCCCCCCCCccceEEEEEEeChhHHHHHH
Q 040326 100 SLPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCLKEMTIACDVYSDDLQNISYVKDGGFFYLKSNAITSEYFK 178 (285)
Q Consensus 100 ~~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~aDi~~~~D~~~~~~~~~~~~~NsGf~~~R~t~~t~~~~~ 178 (285)
..++.|..+... + .|+ ||+.|+|++.++|.-+.|..+ .+....|. ..+..+|+|+|.+.++..+-+-+-
T Consensus 82 ~~~~~kl~~~~l-~--~~~~vlylD~D~~v~~~~~~Lf~~~-~~aA~~d~------~~~~~fNsGv~li~p~~~~~~~l~ 151 (263)
T 3u2u_A 82 GVTLTKLHCWSL-T--QYSKCVFMDADTLVLANIDDLFDRE-ELSAAPDP------GWPDCFNSGVFVYQPSVETYNQLL 151 (263)
T ss_dssp GGGGGGGGGGGC-T--TCSEEEEECTTEEECSCCGGGGGSC-SSEEEECT------TSTTSEEEEEEEECCCHHHHHHHH
T ss_pred hHHhHHHHhccc-c--CcceEEEEcCCEeeccCHHHHhCCC-cceEeccC------CCCccccCeEEEEcccHHHHHHHH
Confidence 467777766652 2 465 999999999999998887654 34444442 123579999999999864433333
Q ss_pred HHHHHHhcCCCCCChhhhhH
Q 040326 179 YQDMTRILFPDSQNRTLCEE 198 (285)
Q Consensus 179 ~w~~~~~~~~~~~DQ~~fn~ 198 (285)
+...... .-...||.++|.
T Consensus 152 ~~~~~~~-~~~~~DQd~LN~ 170 (263)
T 3u2u_A 152 HLASEQG-SFDGGDQGILNT 170 (263)
T ss_dssp HHHHHHC-CTTSSHHHHHHH
T ss_pred HHHHhcC-CCCcccHHHHHH
Confidence 3333212 223579999994
No 3
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=97.35 E-value=0.0019 Score=58.79 Aligned_cols=175 Identities=10% Similarity=0.061 Sum_probs=97.1
Q ss_pred EEEEeCccccCCcchHHHHHHHh-ccccccccccccEEEEEeC--HHHHHHHHHh----CCcEEEeecCcc---ccc--c
Q 040326 28 IITMVGQEWASPGSVLDLFLESF-CIGEETKHLLNHLLIVALD--SKAFQYCKTV----HPHCFYLSNSST---RYT--K 95 (285)
Q Consensus 28 ilt~~n~~~~~~~s~l~~fl~s~-r~g~~t~~l~~~~lVvA~D--~~~~~~c~~~----~~~c~~~~~~g~---~~~--s 95 (285)
|+.++|.+|.. .+...+.|+ .. .+.. --++.|++.| ++..+.+++. +........+.. .+. .
T Consensus 3 I~~~~d~~Y~~---~~~vli~Sl~l~--~~~~-~~~f~il~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 76 (311)
T 1g9r_A 3 IVFAADDNYAA---YLCVAAKSVEAA--HPDT-EIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNI 76 (311)
T ss_dssp EEEEECGGGHH---HHHHHHHHHHHT--CTTS-CCEEEEEESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCC
T ss_pred EEEECCHhHHH---HHHHHHHHHHHH--cCCC-CceEEEEECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCcccc
Confidence 56678999998 788889998 31 1111 1244455544 6666666655 433322222211 111 1
Q ss_pred cccccchhhHHHHHHHHHHhcce-EEEEeccEEEecCcccccCCC---CCeEEecCCCCC-C-------CC-CCCCccce
Q 040326 96 KKQLSLPQLRNKFWQEVIELAYS-VVFTEVDVMWLRNPILQVDCL---KEMTIACDVYSD-D-------LQ-NISYVKDG 162 (285)
Q Consensus 96 ~~~~~~~~~K~~~i~~vL~lGy~-vl~sDvDvVWlrnP~~~~~~~---aDi~~~~D~~~~-~-------~~-~~~~~~Ns 162 (285)
..+...+..|..+ -++|. .++ ||+.|+|++.++|.-+.+.-+ .-+....|.+.. . .. ......||
T Consensus 77 ~~~s~~~y~Rl~l-~~ll~-~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNs 154 (311)
T 1g9r_A 77 RHISITTYARLKL-GEYIA-DCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNA 154 (311)
T ss_dssp TTCCGGGGGGGGH-HHHCC-SCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEE
T ss_pred ccCCHHHHHHHHH-HHHhh-hcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEee
Confidence 2233456666654 33443 444 999999999999988877532 234433454311 0 00 13457999
Q ss_pred EEEEEEeCh----hHHHHHHHHHHHHhcCCCCCChhhhhHHhhccccccCCCeEEEEeccC
Q 040326 163 GFFYLKSNA----ITSEYFKYQDMTRILFPDSQNRTLCEETVVNEELFETLSLRVNYMEQD 219 (285)
Q Consensus 163 Gf~~~R~t~----~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~ 219 (285)
|+|.+.++. ...+-+.+|.......-...||.++| .+-++ ++..||..
T Consensus 155 Gv~linl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN--~~f~~-------~~~~Lp~~ 206 (311)
T 1g9r_A 155 GVLLINLKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILN--GLFKG-------GVCYANSR 206 (311)
T ss_dssp EEEEECHHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHH--HHHTT-------SEEEECGG
T ss_pred eeeeeeHHHHHhcchHHHHHHHHHhccCcCccCCcCHHH--HHHcC-------CEEEcChh
Confidence 999998763 22233344544322222357999999 44221 35666654
No 4
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=96.56 E-value=0.011 Score=53.00 Aligned_cols=175 Identities=6% Similarity=0.076 Sum_probs=84.4
Q ss_pred EEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEe--CHHHHHHHHHh----CCcEEEeecCcccc----cccc
Q 040326 28 IITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVAL--DSKAFQYCKTV----HPHCFYLSNSSTRY----TKKK 97 (285)
Q Consensus 28 ilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~--D~~~~~~c~~~----~~~c~~~~~~g~~~----~s~~ 97 (285)
|+.++|..|.. .+..-+.|+.. .++.--=++.|++. .++..+.+++. +........+...+ .+..
T Consensus 8 I~~~~d~~Y~~---~~~v~i~Sl~~--~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 82 (276)
T 3tzt_A 8 LLLTLDENYIP---QMKVLMTSIYI--NNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKVTDR 82 (276)
T ss_dssp EEEECCGGGHH---HHHHHHHHHHH--HSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC------------
T ss_pred EEEEeCHhHHH---HHHHHHHHHHH--hCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCccccc
Confidence 56888999998 77778888751 11110112334433 34555544443 32222222211111 1122
Q ss_pred cccchhhHHHHHHHHHHhcc-eEEEEeccEEEecCcccccCCC---CCeEEecCCCCCCC--------C-CCCCccceEE
Q 040326 98 QLSLPQLRNKFWQEVIELAY-SVVFTEVDVMWLRNPILQVDCL---KEMTIACDVYSDDL--------Q-NISYVKDGGF 164 (285)
Q Consensus 98 ~~~~~~~K~~~i~~vL~lGy-~vl~sDvDvVWlrnP~~~~~~~---aDi~~~~D~~~~~~--------~-~~~~~~NsGf 164 (285)
|...+..|..+ -+++...+ .||+.|+|++.++|.-+.+.-+ .-+....|+..... . .....+|+|+
T Consensus 83 ~s~~~~~rl~~-~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNsGV 161 (276)
T 3tzt_A 83 YPKEMYYRLLA-GEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNSGL 161 (276)
T ss_dssp -CHHHHHHHTH-HHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEEEE
T ss_pred cCHHHHHHHHH-HHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEeeE
Confidence 33344444332 33443345 5999999999999998887532 23444445432210 0 1137899999
Q ss_pred EEEEeCh-----hHHHHHHHHHHHHhcCCCCCChhhhhHHhhccccccCCCeEEEEecc
Q 040326 165 FYLKSNA-----ITSEYFKYQDMTRILFPDSQNRTLCEETVVNEELFETLSLRVNYMEQ 218 (285)
Q Consensus 165 ~~~R~t~-----~t~~~~~~w~~~~~~~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~ 218 (285)
+.+-.+. .+.+++ .|.......-...||+++| .+-++ ++..||.
T Consensus 162 ~linl~~~R~~~~~~~~~-~~~~~~~~~~~~~DQd~LN--~~f~~-------~~~~Lp~ 210 (276)
T 3tzt_A 162 LLINLKRAREEIDPDEIF-SFVEDNHMNLLLPDQDILN--AMYGD-------RIYPLDD 210 (276)
T ss_dssp EEEEHHHHHHHCCHHHHH-HHHHHC--------CHHHH--HHHGG-------GEEEEEH
T ss_pred EEEEHHHHHhhhHHHHHH-HHHHhccccccCCChhHHH--HHHhC-------CEEECCc
Confidence 9998864 222333 3433211111357999999 44322 4788885
No 5
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=64.67 E-value=6 Score=33.64 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=55.2
Q ss_pred HHHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHH-hcce-EEEEeccEEEec-Cc---ccccCCCCCeEEe
Q 040326 72 AFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIE-LAYS-VVFTEVDVMWLR-NP---ILQVDCLKEMTIA 145 (285)
Q Consensus 72 ~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~-lGy~-vl~sDvDvVWlr-nP---~~~~~~~aDi~~~ 145 (285)
....|.+.|++......+ .-+...|..++.++|+ .||+ ++|.|+|||=+. || ...+..++||++.
T Consensus 17 l~~~l~~~gi~~~l~~~~---------SlI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~g~DVV~G 87 (203)
T 2c0n_A 17 LIDFLVKNDIEYVILSRR---------NHVAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNEGYDVVCG 87 (203)
T ss_dssp HHHHHHHTTCCEEEECCC---------SCHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhCCCeEEEEccc---------cchHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHHhCCCCEEEE
Confidence 345566677776655442 2355689999999888 7988 788999966444 44 1223467899886
Q ss_pred cCCCCC--C-----C-------CCCCCccceEEEEEEe
Q 040326 146 CDVYSD--D-----L-------QNISYVKDGGFFYLKS 169 (285)
Q Consensus 146 ~D~~~~--~-----~-------~~~~~~~NsGf~~~R~ 169 (285)
+=...+ . . ...-...-|||+.+|-
T Consensus 88 sYp~K~~~~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR 125 (203)
T 2c0n_A 88 YYYLKTLRGYSVYRKDWEKEIFDGEVNGCGLGFTFIKR 125 (203)
T ss_dssp ECBCTTSSSBSEESSSBCSSCCCEECSEECSSEEEEEH
T ss_pred EeeccCCCccchHHHHHHHhccCceeeeccccEEEEhH
Confidence 521111 0 0 0123456789998876
No 6
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=45.32 E-value=61 Score=29.05 Aligned_cols=101 Identities=20% Similarity=0.266 Sum_probs=57.8
Q ss_pred HHHHHhc-CCCeEEEEE-eCccccCCcchHHHHHHHhccccccccc----cccEEEEEeCHHHHHHHHHhCC----cEEE
Q 040326 16 LLRRTTM-QDRTVIITM-VGQEWASPGSVLDLFLESFCIGEETKHL----LNHLLIVALDSKAFQYCKTVHP----HCFY 85 (285)
Q Consensus 16 ll~~~A~-~d~tVilt~-~n~~~~~~~s~l~~fl~s~r~g~~t~~l----~~~~lVvA~D~~~~~~c~~~~~----~c~~ 85 (285)
+|++.-. .|=||-||+ +-..|.. |++.|++|.. +.+ --++.|++-+.+..-.. ++++ ..+.
T Consensus 48 il~~~y~~~n~tIGl~vfA~GkY~~---fl~~Fl~SAe-----k~Fm~g~~V~YYVFTD~~~~vP~v-~l~~~r~~~V~~ 118 (298)
T 3ioh_A 48 ILNEQFRLQNTTIGLTVFAIKKYVA---FLKLFLETAE-----KHFMVGHRVHYYVFTDQPAAVPRV-TLGTGRQLSVLE 118 (298)
T ss_dssp HHHHHHHHTTCEEEEEEEECGGGGG---GHHHHHHHHH-----HHBSTTSEEEEEEEESCGGGSCCC-CCCTTEEEEEEE
T ss_pred HHHHHHHHhCCcEEEEEEEeCcHHH---HHHHHHHhHH-----HhccCCceEEEEEEeCChhhCCcc-ccCCCCeEEEEE
Confidence 4444433 344554444 5556888 9999999965 333 24666777665542110 0111 1111
Q ss_pred eecCcccccccccccchhhHHHHHHHHHH----hcce-EEEEeccEEEecC
Q 040326 86 LSNSSTRYTKKKQLSLPQLRNKFWQEVIE----LAYS-VVFTEVDVMWLRN 131 (285)
Q Consensus 86 ~~~~g~~~~s~~~~~~~~~K~~~i~~vL~----lGy~-vl~sDvDvVWlrn 131 (285)
.. ....|..++..|.+.+....+ .-+| +++.|+|.++..+
T Consensus 119 v~------~~~~Wqd~sm~Rm~~i~~~~~~~~~~EvDyLfc~dvd~~F~~~ 163 (298)
T 3ioh_A 119 VR------AYKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDH 163 (298)
T ss_dssp CC------CCSSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEEESSEEECSC
T ss_pred ec------cccCCccccHHHHHHHHHHHHHHHhhcCCEEEEecCCCeeccC
Confidence 11 234667777788888877654 3456 5566999987653
No 7
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=42.66 E-value=1.5e+02 Score=24.93 Aligned_cols=68 Identities=12% Similarity=0.171 Sum_probs=43.2
Q ss_pred CCchHHHHHHHHhcCCCeEEEEEeCccccCCcchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCC
Q 040326 9 INNSLLQLLRRTTMQDRTVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHP 81 (285)
Q Consensus 9 ~~~~L~~ll~~~A~~d~tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~ 81 (285)
+-+.|+++|+.+...+-.+.+=.=......+ .+.+..++-++ .....++++|.+.|.++.+.+++..+
T Consensus 98 ~iPtL~evL~~~~~~~~~l~iEiK~~~~~~~-~~~~~v~~~l~----~~~~~~~vii~SF~~~~l~~~~~~~p 165 (252)
T 2pz0_A 98 RIPTLYEVFELIGDKDFLVNIEIKSGIVLYP-GIEEKLIKAIK----EYNFEERVIISSFNHYSLRDVKKMAP 165 (252)
T ss_dssp CCCBHHHHHHHHTTSCCEEEEEECCSSCCCT-THHHHHHHHHH----HTTCTTTEEEEESBHHHHHHHHHHCT
T ss_pred cCCCHHHHHHHhhhcCCeEEEEeCCCCcccH-HHHHHHHHHHH----hcCCCCCEEEEeCCHHHHHHHHHHCC
Confidence 3478999999886322233333222111111 26667777665 23346789999999999999999864
No 8
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=39.92 E-value=48 Score=29.61 Aligned_cols=174 Identities=12% Similarity=0.045 Sum_probs=89.7
Q ss_pred CCeEEEE-EeCcccc-CCcchHHHHHHHhccccccccc----cccEEEEEeCHHHHHHHHHhCC----cEEEeecCcccc
Q 040326 24 DRTVIIT-MVGQEWA-SPGSVLDLFLESFCIGEETKHL----LNHLLIVALDSKAFQYCKTVHP----HCFYLSNSSTRY 93 (285)
Q Consensus 24 d~tVilt-~~n~~~~-~~~s~l~~fl~s~r~g~~t~~l----~~~~lVvA~D~~~~~~c~~~~~----~c~~~~~~g~~~ 93 (285)
+-||-|| ++-..|. . |++.|++|.. +.+ --++.|++-+.+..-.. .+++ ..+.. .
T Consensus 47 n~tIGl~vfa~GkY~~~---fl~~Fl~SAE-----k~Fm~g~~v~YYVFTD~~~~~p~v-~l~~~r~~~V~~i------~ 111 (289)
T 1o7q_A 47 KITVGLTVFAVGRYIEH---YLEEFLTSAN-----KHFMVGHPVIFYIMVDDVSRMPLI-ELGPLRSFKVFKI------K 111 (289)
T ss_dssp TCCEEEEEEECTTHHHH---HHHHHHHHHH-----HHBSTTSCEEEEEEESCGGGCCCC-CCCTTEEEEEEEC------C
T ss_pred CCeEEEEEEEecccHHH---HHHHHHHHHH-----HhccCCCeEEEEEEeCChhhCCcc-ccCCCCeEEEEEe------c
Confidence 4455444 4555677 6 9999999964 332 34666777776553211 1111 11111 1
Q ss_pred cccccccchhhHHHHHHHHHH----hcce-EEEEeccEEEecCcccccCCCCCeEEec-CCCCC----------CC----
Q 040326 94 TKKKQLSLPQLRNKFWQEVIE----LAYS-VVFTEVDVMWLRNPILQVDCLKEMTIAC-DVYSD----------DL---- 153 (285)
Q Consensus 94 ~s~~~~~~~~~K~~~i~~vL~----lGy~-vl~sDvDvVWlrnP~~~~~~~aDi~~~~-D~~~~----------~~---- 153 (285)
....|..++..|.+.+....+ ..+| +.+.|+|.++..+=-.-+. .|++.+- -.+.+ +|
T Consensus 112 ~~~~W~d~sm~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E~L--g~lv~~lHp~~y~~~~~~fpYERrp~S~A 189 (289)
T 1o7q_A 112 PEKRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVETL--GESVAQLQAWWYKADPNDFTYERRKESAA 189 (289)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEECSCBCGGGC--SSEEEEECTTTTTSCGGGSCCCCCTTSTT
T ss_pred cccCCchhHHHHHHHHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHHHH--HHHHHccCHHHhCCCCCCCCCCCCcCcee
Confidence 234577788888988888762 3566 4556999997763222222 3444442 12221 11
Q ss_pred ---CCCCCccceEEEEEEeChhHHHHHHHHHHHHhc------CCCCCChhhhhHHhhccccccCCCeEEEEeccCCC
Q 040326 154 ---QNISYVKDGGFFYLKSNAITSEYFKYQDMTRIL------FPDSQNRTLCEETVVNEELFETLSLRVNYMEQDRY 221 (285)
Q Consensus 154 ---~~~~~~~NsGf~~~R~t~~t~~~~~~w~~~~~~------~~~~~DQ~~fn~~~v~~~~~~~~gl~v~~Ld~~~F 221 (285)
.+.+...-.|=++=-......+|.+...+.... ...-||-+-+|.-.+.|. ..++|++.|.
T Consensus 190 yIp~~eGdfYY~Ga~fGGt~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~K-------PtKvLSPEY~ 259 (289)
T 1o7q_A 190 YIPFGEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEAQWHDESHLNKYFLLNK-------PTKILSPEYC 259 (289)
T ss_dssp CCCTTCCSCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHSC-------CSEEECGGGS
T ss_pred eecCCCCCEEEEceeeCCcHHHHHHHHHHHHHHHHHHHhCCeEEEecchhhhhHHHhhcC-------CCEEECHHHC
Confidence 122222223333334456667777766543221 123468888885222221 1256888764
No 9
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=29.21 E-value=42 Score=29.27 Aligned_cols=102 Identities=7% Similarity=0.011 Sum_probs=55.4
Q ss_pred EEEeCccccCCcchHHHHHHHhccccccccc------cccEEEEEeCHHHHHHHHHhCCcEEEeecCcccccccccccch
Q 040326 29 ITMVGQEWASPGSVLDLFLESFCIGEETKHL------LNHLLIVALDSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLP 102 (285)
Q Consensus 29 lt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l------~~~~lVvA~D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~ 102 (285)
+.++-..|.. |++.|++|.. +.+ +-++.|++-+.+....-. . ...+.... ....|..++
T Consensus 6 ~vfA~GkY~~---fl~~Fl~SAe-----k~Fm~g~~~~V~yYVFTD~~~~vp~~~-~-~~v~~~~~-----~~~~Wqd~s 70 (246)
T 4ayl_A 6 LYICTGKYDI---FWKDFYLSAE-----RYFMQDQSFIIEYYVFTDSPKLYDEEN-N-KHIHRIKQ-----KNLGWPDNT 70 (246)
T ss_dssp EEECCGGGGG---GHHHHHHHHH-----HHBSCSTTSEEEEEEEESCSCCTTTTT-C-TTEEEEEC-----CCCCTTHHH
T ss_pred EEEEeCcHHH---HHHHHHHhHH-----HhccCCCccceEEEEEeCChhhCCcCC-C-ceEEEEeC-----CcCCCcccc
Confidence 3345556777 9999999964 222 257778877766543211 1 11111111 123455566
Q ss_pred hhHHHHHHHHHH---hcce-EEEEeccEEEecCcc-cccCCC--CCeEEe
Q 040326 103 QLRNKFWQEVIE---LAYS-VVFTEVDVMWLRNPI-LQVDCL--KEMTIA 145 (285)
Q Consensus 103 ~~K~~~i~~vL~---lGy~-vl~sDvDvVWlrnP~-~~~~~~--aDi~~~ 145 (285)
..|.+++....+ .-.| +++.|+|.++..+== +-+.+. .+++.+
T Consensus 71 m~Rm~~i~~~~~~~~~evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~ 120 (246)
T 4ayl_A 71 LKRFHIFLRIKEQLERETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGT 120 (246)
T ss_dssp HTHHHHHHTTHHHHHHHCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEE
T ss_pred hHHHHHHHHHHHHHHhhCCEEEEEeCCceeeccCCHHHcccCCCCCEEEE
Confidence 667766655432 2356 556799999765432 233233 355555
No 10
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=26.52 E-value=2.5e+02 Score=22.62 Aligned_cols=107 Identities=9% Similarity=0.207 Sum_probs=53.4
Q ss_pred eEEEEEeCccccCCcchHHHHHHHhccccccccccccE-EEEE---eCHHHHHHHHHh--CCcEEEeecC--cccccccc
Q 040326 26 TVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHL-LIVA---LDSKAFQYCKTV--HPHCFYLSNS--STRYTKKK 97 (285)
Q Consensus 26 tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~-lVvA---~D~~~~~~c~~~--~~~c~~~~~~--g~~~~s~~ 97 (285)
+||+.+-|.+ + ++...|+|+. .....++ +||. .++++.+.+++. .+..-....+ +.. ....
T Consensus 4 SViIp~yn~~--~---~l~~~l~Sl~-----~q~~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~i~~~~~~~~-~~~~ 72 (255)
T 1qg8_A 4 SVIMTSYNKS--D---YVAKSISSIL-----SQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDISGVK-ERTE 72 (255)
T ss_dssp EEEEEESSCT--T---THHHHHHHHH-----TCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCCCSHH-HHHS
T ss_pred EEEEEcCCCH--H---HHHHHHHHHH-----hccCCceEEEEEECCCCchHHHHHHHHhhcCCEEEEeccccccc-cccc
Confidence 4777777765 5 8899999986 2222333 3333 335677777765 2322222211 000 0000
Q ss_pred cccchhhHHHHHHHHHHhcceEEEEeccEEEecCccccc------CCCCCeEEe
Q 040326 98 QLSLPQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQV------DCLKEMTIA 145 (285)
Q Consensus 98 ~~~~~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~------~~~aDi~~~ 145 (285)
..-....+...+.. ..|==++|.|.|.+|-.|=+..+ .++.+++..
T Consensus 73 n~G~~~a~N~gi~~--a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~ 124 (255)
T 1qg8_A 73 KTRYAALINQAIEM--AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYS 124 (255)
T ss_dssp SCHHHHHHHHHHHH--CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEE
T ss_pred ccCHHHHHHHHHHH--cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEe
Confidence 11112233333332 25666899999999855544433 235566544
No 11
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=24.62 E-value=2.7e+02 Score=23.25 Aligned_cols=67 Identities=10% Similarity=0.112 Sum_probs=40.6
Q ss_pred cchHHHHHHHhccccccccc-cccEEEEEe--CHHHHHHHHHhCCcEEEeecCcccccccccccchhhHHHHHHHHHHhc
Q 040326 40 GSVLDLFLESFCIGEETKHL-LNHLLIVAL--DSKAFQYCKTVHPHCFYLSNSSTRYTKKKQLSLPQLRNKFWQEVIELA 116 (285)
Q Consensus 40 ~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~--D~~~~~~c~~~~~~c~~~~~~g~~~~s~~~~~~~~~K~~~i~~vL~lG 116 (285)
||.+...++.++.| .+ .+=.+|++- |....+++++.|+|++..+... | ....++..+-+.+
T Consensus 19 gsnl~all~~~~~~----~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~~~~-------~-----~~~~~~~~L~~~~ 82 (215)
T 3kcq_A 19 GSNLEALAKAFSTE----ESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKP-------L-----DIEHISTVLREHD 82 (215)
T ss_dssp CHHHHHHHHHTCCC-----CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTT-------B-----CHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHcC----CCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeCccc-------C-----ChHHHHHHHHHhC
Confidence 45778888887622 22 222334442 3446778999999999875531 1 1145666666677
Q ss_pred ceEEEE
Q 040326 117 YSVVFT 122 (285)
Q Consensus 117 y~vl~s 122 (285)
.|++++
T Consensus 83 ~Dlivl 88 (215)
T 3kcq_A 83 VDLVCL 88 (215)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 776665
No 12
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=23.45 E-value=2.7e+02 Score=23.38 Aligned_cols=70 Identities=6% Similarity=-0.052 Sum_probs=44.8
Q ss_pred cCCchHHHHHHHHhcCCCeEEEEEeCc-cccCCcchHHHHHHHhccccccccccccEEEEEeCHHHHHHHHHhCC
Q 040326 8 KINNSLLQLLRRTTMQDRTVIITMVGQ-EWASPGSVLDLFLESFCIGEETKHLLNHLLIVALDSKAFQYCKTVHP 81 (285)
Q Consensus 8 ~~~~~L~~ll~~~A~~d~tVilt~~n~-~~~~~~s~l~~fl~s~r~g~~t~~l~~~~lVvA~D~~~~~~c~~~~~ 81 (285)
.+-+.|+++|+.+...+-.+.+=.=.. .-.....+.+..++-++ ...+.++++|.+.|.++.+.+++..|
T Consensus 83 ~~iptL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~----~~~~~~~v~~~SF~~~~l~~~~~~~p 153 (250)
T 3ks6_A 83 SHPMTLEELCALYVDSHVNFRCEIKPGVDGLPYEGFVALVIAGLE----RHSMLERTTFSSFLLASMDELWKATT 153 (250)
T ss_dssp CCCEEHHHHHHHHTTCSCEEEEEECCCTTSCCCTTHHHHHHHHHH----HTTCGGGEEEEESCHHHHHHHHHHCC
T ss_pred ccCcCHHHHHHHHhccCcEEEEEeCCCcccCcchHHHHHHHHHHH----hcCCCCCEEEEeCCHHHHHHHHHHCC
Confidence 356889999999873232333322111 00011127777777776 23346889999999999999999864
No 13
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=23.27 E-value=3.1e+02 Score=22.83 Aligned_cols=71 Identities=6% Similarity=0.104 Sum_probs=41.8
Q ss_pred cchHHHHHHHhccccccccc-cccEEEEEe--CHHHHHHHHHhCCcEEEeecCccccccc-ccccchhhHHHHHHHHHHh
Q 040326 40 GSVLDLFLESFCIGEETKHL-LNHLLIVAL--DSKAFQYCKTVHPHCFYLSNSSTRYTKK-KQLSLPQLRNKFWQEVIEL 115 (285)
Q Consensus 40 ~s~l~~fl~s~r~g~~t~~l-~~~~lVvA~--D~~~~~~c~~~~~~c~~~~~~g~~~~s~-~~~~~~~~K~~~i~~vL~l 115 (285)
||.+...++.++.| .+ .+=.+|++- |....+++++.|++++..+... |.++ .| -..++..+-+.
T Consensus 18 gsnl~all~~~~~~----~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~~~~--~~~r~~~------d~~~~~~l~~~ 85 (209)
T 4ds3_A 18 GSNMEALIRAAQAP----GFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFKRKD--FASKEAH------EDAILAALDVL 85 (209)
T ss_dssp CHHHHHHHHHHTST----TCSEEEEEEEESCTTCTHHHHHHHTTCCEEECCGGG--SSSHHHH------HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcC----CCCcEEEEEEECCcccHHHHHHHHcCCCEEEeCccc--cCCHHHH------HHHHHHHHHhc
Confidence 45788888887622 22 222344542 3345678999999999876531 2111 11 13566666677
Q ss_pred cceEEEE
Q 040326 116 AYSVVFT 122 (285)
Q Consensus 116 Gy~vl~s 122 (285)
+.|++++
T Consensus 86 ~~Dliv~ 92 (209)
T 4ds3_A 86 KPDIICL 92 (209)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 7777665
No 14
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=21.41 E-value=2.8e+02 Score=22.00 Aligned_cols=100 Identities=15% Similarity=0.184 Sum_probs=52.2
Q ss_pred eEEEEEeCccccCCcchHHHHHHHhccccccccccccE-EEEEeC---HHHHHHHHHh---CCcEEEeecCccccccccc
Q 040326 26 TVIITMVGQEWASPGSVLDLFLESFCIGEETKHLLNHL-LIVALD---SKAFQYCKTV---HPHCFYLSNSSTRYTKKKQ 98 (285)
Q Consensus 26 tVilt~~n~~~~~~~s~l~~fl~s~r~g~~t~~l~~~~-lVvA~D---~~~~~~c~~~---~~~c~~~~~~g~~~~s~~~ 98 (285)
+||+.+-|.. + ++...|+|+. ..-..++ ||+.-| +++.+.+++. .+.......+..
T Consensus 8 sViIp~yn~~--~---~l~~~l~Sl~-----~q~~~~~eiIvvDd~S~d~t~~~~~~~~~~~~~i~~i~~~n~------- 70 (240)
T 3bcv_A 8 SVIVPIYNVE--K---YLDQCVQALL-----AQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKKNA------- 70 (240)
T ss_dssp EEEEEESSCT--T---THHHHHHHHH-----TCSSSSEEEEEEECCCSSSHHHHHHHHHHHCSSEEEEECCCC-------
T ss_pred EEEEecCCCH--H---HHHHHHHHHH-----hCcCCCeEEEEEECCCCcCHHHHHHHHHhhCCCEEEEECCCC-------
Confidence 5777777765 5 8899999986 2222333 333322 4556666554 233222222210
Q ss_pred ccchhhHHHHHHHHHHhcceEEEEeccEEEecCcccccC-----CCCCeEEe
Q 040326 99 LSLPQLRNKFWQEVIELAYSVVFTEVDVMWLRNPILQVD-----CLKEMTIA 145 (285)
Q Consensus 99 ~~~~~~K~~~i~~vL~lGy~vl~sDvDvVWlrnP~~~~~-----~~aDi~~~ 145 (285)
-....+...+.. ..|==|+|.|.|.+|-.+=+..+. .+.|+++.
T Consensus 71 -G~~~a~N~g~~~--a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~ 119 (240)
T 3bcv_A 71 -GLGMACNSGLDV--ATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFT 119 (240)
T ss_dssp -CHHHHHHHHHHH--CCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC
T ss_pred -ChHHHHHHHHHH--cCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 112233333332 256669999999987554444432 25677654
Done!