BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040328
MGVSFNINPSSSSFAETHSRKHKLLLISNYILLAASSSFIFLTLSLRLFPSLVGFFLILL
HVLTILIAVSSLSVATSSSNKCYAAHMVATVLTGIFQGSVSVLIFASTSDFLGYLKSYVR
EEDGAVILKLAGALSVLIFFLEWVVLALTFLLRYHAFVDGSNSGAAGASRFQEEDSKAWS
RPFQVYV

High Scoring Gene Products

Symbol, full name Information P value
AT5G16250 protein from Arabidopsis thaliana 8.8e-47
AT3G02640 protein from Arabidopsis thaliana 1.5e-44
AT5G36710 protein from Arabidopsis thaliana 1.4e-39
AT5G36800 protein from Arabidopsis thaliana 1.4e-39

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040328
        (187 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2181447 - symbol:AT5G16250 "AT5G16250" species...   490  8.8e-47   1
TAIR|locus:2076849 - symbol:AT3G02640 "AT3G02640" species...   469  1.5e-44   1
TAIR|locus:2147376 - symbol:AT5G36710 "AT5G36710" species...   422  1.4e-39   1
TAIR|locus:2832155 - symbol:AT5G36800 "AT5G36800" species...   422  1.4e-39   1


>TAIR|locus:2181447 [details] [associations]
            symbol:AT5G16250 "AT5G16250" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 EMBL:AL391148 ProtClustDB:CLSN2686142
            EMBL:AK227420 IPI:IPI00548346 PIR:T51495 RefSeq:NP_197129.1
            UniGene:At.22180 STRING:Q9LF03 PRIDE:Q9LF03
            EnsemblPlants:AT5G16250.1 GeneID:831485 KEGG:ath:AT5G16250
            TAIR:At5g16250 InParanoid:Q9LF03 OMA:ESHYHTH PhylomeDB:Q9LF03
            Genevestigator:Q9LF03 Uniprot:Q9LF03
        Length = 183

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 105/178 (58%), Positives = 122/178 (68%)

Query:    10 SSSSFAETHSRKHKLLLISNYILLAASSSFIFLTLSLRLFPSLVGFFLILLHVLTILIXX 69
             SSS   E+H   HK+ L SNYILL A+SS IFLTLSLRL PS+ GF LILLH  TI    
Sbjct:     6 SSSPVEESHYHTHKIFLFSNYILLGAASSCIFLTLSLRLIPSICGFLLILLHATTIAAAV 65

Query:    70 XXXXXXXXXXNKCYAAHMVATVLTGIFQGSVSVLIFASTSDFLGYLKSYVREEDGAVILK 129
                       N+ YAAHMVATVLT IFQGSVSVLIF +TS FLG LKSYVREED AVILK
Sbjct:    66 SGCAAASCGRNRWYAAHMVATVLTAIFQGSVSVLIFTNTSKFLGSLKSYVREEDAAVILK 125

Query:   130 LAGALSVLIFFLEWVVLALTFLLRYHAFVDGSNSGAAGAS-RFQ-EEDSKAWSRPFQV 185
             L G L ++IF L+W+VL   F L+Y+A+VDG +  A   + + Q EE+ K W  PFQV
Sbjct:   126 LGGGLCIVIFCLDWIVLVCAFFLKYYAYVDGGDGVAMKRTGKVQSEENPKDWPWPFQV 183


>TAIR|locus:2076849 [details] [associations]
            symbol:AT3G02640 "AT3G02640" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016572 "histone phosphorylation" evidence=RCA]
            EMBL:AC021640 EMBL:CP002686 GenomeReviews:BA000014_GR
            UniGene:At.18819 ProtClustDB:CLSN2686142 EMBL:AY062624
            EMBL:AY088259 EMBL:AY128811 IPI:IPI00539529 RefSeq:NP_566178.1
            STRING:Q9M878 EnsemblPlants:AT3G02640.1 GeneID:821289
            KEGG:ath:AT3G02640 TAIR:At3g02640 eggNOG:NOG297727
            HOGENOM:HOG000238564 InParanoid:Q9M878 OMA:GSHTHRA PhylomeDB:Q9M878
            ArrayExpress:Q9M878 Genevestigator:Q9M878 Uniprot:Q9M878
        Length = 185

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 101/178 (56%), Positives = 122/178 (68%)

Query:    13 SFAETHSRKHKLLLISNYILLAASSSFIFLTLSLRLFPSLVGFFLILLHVLTILIXXXXX 72
             S  E+H   HKL L +NY+LL ASSS IFLTLSLRL PSL GFFLILLH  TI       
Sbjct:    10 SIQESHYYTHKLFLTANYVLLGASSSCIFLTLSLRLIPSLCGFFLILLHATTIAAAVSGC 69

Query:    73 XXXXXXXNKCYAAHMVATVLTGIFQGSVSVLIFASTSDFLGYLKSYVREEDGAVILKLAG 132
                    N+ YAAHM+ATVLT IFQGSVSVLIF +TS+FL  L SYVRE++ ++ILKLAG
Sbjct:    70 AAASYGKNRWYAAHMIATVLTAIFQGSVSVLIFTNTSNFLESLNSYVREKEASMILKLAG 129

Query:   133 ALSVLIFFLEWVVLALTFLLRYHAFVDGSNSGAA--GASRFQEEDS---KAWSRPFQV 185
              L V+IF LEW+VL L F L+Y+A+VDG N+G A     + Q E++     W+  FQV
Sbjct:   130 GLCVVIFCLEWIVLVLAFFLKYYAYVDGDNNGVAMKRTGKVQSEETLKNSPWA--FQV 185


>TAIR|locus:2147376 [details] [associations]
            symbol:AT5G36710 "AT5G36710" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 EMBL:BT006402 EMBL:AK220601
            EMBL:AK227697 IPI:IPI00530414 RefSeq:NP_198486.2 RefSeq:NP_198496.1
            UniGene:At.30536 UniGene:At.71644 EnsemblPlants:AT5G36710.1
            EnsemblPlants:AT5G36800.1 GeneID:833636 GeneID:833647
            KEGG:ath:AT5G36710 KEGG:ath:AT5G36800 eggNOG:NOG288108 OMA:KGNTHNI
            ProtClustDB:CLSN2686142 Genevestigator:Q84MC5 Uniprot:Q84MC5
        Length = 183

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 94/180 (52%), Positives = 116/180 (64%)

Query:    15 AETHSRKHKLLLISNYILLAASSSFIFLTLSLRLFPSLVGFFLILLHVLTILIXXX---- 70
             +++    H + L+ NYILL ++SS IFLT+SLRLFPSL G  LI L+ LTI         
Sbjct:     4 SKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCSI 63

Query:    71 -XXXXXXXXXNKCYAAHMVATVLTGIFQGSVSVLIFASTSDFLGYLKSYVREEDGAVILK 129
                       ++ Y +HMVATVLT IFQG+VSVLIF  T DFL +LKSYVREEDG VILK
Sbjct:    64 FASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVILK 123

Query:   130 LAGALSVLIFFLEWVVLALTFLLRYHAFVDGSNSGAAGAS-RFQEEDSKAW-SRPFQVYV 187
             L+G L VL+F LEW+VL L FLL+Y  ++D S         R QEED K W S PFQ+ +
Sbjct:   124 LSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRRQEEDLKDWPSYPFQLKI 183


>TAIR|locus:2832155 [details] [associations]
            symbol:AT5G36800 "AT5G36800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] EMBL:CP002688 EMBL:BT006402
            EMBL:AK220601 EMBL:AK227697 IPI:IPI00530414 RefSeq:NP_198486.2
            RefSeq:NP_198496.1 UniGene:At.30536 UniGene:At.71644
            EnsemblPlants:AT5G36710.1 EnsemblPlants:AT5G36800.1 GeneID:833636
            GeneID:833647 KEGG:ath:AT5G36710 KEGG:ath:AT5G36800
            eggNOG:NOG288108 OMA:KGNTHNI ProtClustDB:CLSN2686142
            Genevestigator:Q84MC5 Uniprot:Q84MC5
        Length = 183

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 94/180 (52%), Positives = 116/180 (64%)

Query:    15 AETHSRKHKLLLISNYILLAASSSFIFLTLSLRLFPSLVGFFLILLHVLTILIXXX---- 70
             +++    H + L+ NYILL ++SS IFLT+SLRLFPSL G  LI L+ LTI         
Sbjct:     4 SKSKGNTHNIFLLCNYILLGSASSCIFLTISLRLFPSLSGLSLIFLYTLTIATAVSGCSI 63

Query:    71 -XXXXXXXXXNKCYAAHMVATVLTGIFQGSVSVLIFASTSDFLGYLKSYVREEDGAVILK 129
                       ++ Y +HMVATVLT IFQG+VSVLIF  T DFL +LKSYVREEDG VILK
Sbjct:    64 FASSTSATASDRLYGSHMVATVLTAIFQGAVSVLIFTRTGDFLRFLKSYVREEDGEVILK 123

Query:   130 LAGALSVLIFFLEWVVLALTFLLRYHAFVDGSNSGAAGAS-RFQEEDSKAW-SRPFQVYV 187
             L+G L VL+F LEW+VL L FLL+Y  ++D S         R QEED K W S PFQ+ +
Sbjct:   124 LSGGLCVLMFCLEWIVLVLAFLLKYSDYLDESVVDDDDFKVRRQEEDLKDWPSYPFQLKI 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.139   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      187       175   0.00078  109 3  11 22  0.44    31
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  142 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.72u 0.15s 15.87t   Elapsed:  00:00:00
  Total cpu time:  15.72u 0.15s 15.87t   Elapsed:  00:00:00
  Start:  Fri May 10 14:13:37 2013   End:  Fri May 10 14:13:37 2013

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