Query 040329
Match_columns 164
No_of_seqs 107 out of 1126
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 07:23:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040329.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040329hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02378 glutathione S-transfe 100.0 2.2E-34 4.7E-39 205.4 15.5 164 1-164 21-185 (213)
2 PLN02817 glutathione dehydroge 100.0 3.2E-34 6.8E-39 209.7 16.3 164 1-164 74-237 (265)
3 TIGR00862 O-ClC intracellular 100.0 3.4E-32 7.3E-37 195.3 15.0 163 1-164 20-206 (236)
4 PRK09481 sspA stringent starva 100.0 5E-32 1.1E-36 193.0 14.5 158 1-164 20-188 (211)
5 KOG0406 Glutathione S-transfer 100.0 6.1E-31 1.3E-35 185.1 14.5 164 1-164 19-197 (231)
6 KOG1422 Intracellular Cl- chan 100.0 4.6E-29 1E-33 170.7 14.6 164 1-164 22-191 (221)
7 PRK15113 glutathione S-transfe 100.0 5.5E-29 1.2E-33 177.7 15.5 154 1-163 17-193 (214)
8 PRK13972 GSH-dependent disulfi 100.0 5.9E-29 1.3E-33 177.6 13.5 155 1-164 10-191 (215)
9 PLN02473 glutathione S-transfe 100.0 1.1E-28 2.5E-33 176.0 14.0 160 1-164 12-197 (214)
10 TIGR01262 maiA maleylacetoacet 100.0 7.6E-29 1.6E-33 176.4 12.9 158 1-164 9-190 (210)
11 COG0625 Gst Glutathione S-tran 100.0 1.1E-28 2.4E-33 175.8 12.2 157 1-164 10-190 (211)
12 PRK10542 glutathionine S-trans 100.0 1.2E-28 2.7E-33 174.2 12.2 156 2-164 10-183 (201)
13 PLN02395 glutathione S-transfe 100.0 2.2E-28 4.8E-33 174.6 13.1 160 1-164 11-196 (215)
14 KOG0868 Glutathione S-transfer 100.0 1.9E-27 4.1E-32 158.9 13.0 140 2-141 16-176 (217)
15 PRK10357 putative glutathione 99.9 6.9E-27 1.5E-31 165.4 12.7 159 1-164 10-186 (202)
16 PRK11752 putative S-transferas 99.9 7.4E-27 1.6E-31 171.4 13.1 161 1-164 53-244 (264)
17 PRK10387 glutaredoxin 2; Provi 99.9 1.3E-26 2.8E-31 164.8 12.2 153 1-164 10-199 (210)
18 PTZ00057 glutathione s-transfe 99.9 2.5E-26 5.4E-31 163.0 11.9 153 1-163 14-184 (205)
19 TIGR02182 GRXB Glutaredoxin, G 99.9 5.4E-25 1.2E-29 156.5 12.2 152 1-164 9-198 (209)
20 KOG0867 Glutathione S-transfer 99.9 2.4E-24 5.3E-29 154.6 12.6 160 1-164 12-195 (226)
21 KOG1695 Glutathione S-transfer 99.9 8.8E-23 1.9E-27 142.9 12.6 139 3-142 15-168 (206)
22 cd03061 GST_N_CLIC GST_N famil 99.9 2.4E-21 5.1E-26 119.1 7.9 67 1-67 23-89 (91)
23 KOG4420 Uncharacterized conser 99.8 2.5E-20 5.4E-25 131.7 8.8 160 3-163 38-272 (325)
24 PF13417 GST_N_3: Glutathione 99.8 6.5E-20 1.4E-24 110.0 5.8 67 1-67 8-74 (75)
25 PLN02907 glutamate-tRNA ligase 99.8 6.6E-19 1.4E-23 143.4 12.3 138 2-164 12-152 (722)
26 cd03052 GST_N_GDAP1 GST_N fami 99.8 1.5E-18 3.3E-23 103.4 6.9 61 1-61 10-73 (73)
27 cd03059 GST_N_SspA GST_N famil 99.8 2.6E-18 5.6E-23 102.4 7.5 64 1-64 10-73 (73)
28 cd03048 GST_N_Ure2p_like GST_N 99.7 7.3E-18 1.6E-22 102.5 7.7 66 1-66 10-81 (81)
29 cd03058 GST_N_Tau GST_N family 99.7 8.5E-18 1.8E-22 100.5 7.6 64 1-64 10-74 (74)
30 cd03060 GST_N_Omega_like GST_N 99.7 9.4E-18 2E-22 99.5 7.0 60 1-60 10-70 (71)
31 cd03076 GST_N_Pi GST_N family, 99.7 8.9E-18 1.9E-22 100.1 5.7 62 1-62 11-72 (73)
32 cd03050 GST_N_Theta GST_N fami 99.7 2.3E-17 5.1E-22 99.0 7.6 64 1-64 10-76 (76)
33 cd03053 GST_N_Phi GST_N family 99.7 2.1E-17 4.5E-22 99.2 7.2 63 1-63 11-76 (76)
34 cd03043 GST_N_1 GST_N family, 99.7 1.9E-17 4E-22 98.7 6.8 61 1-61 11-73 (73)
35 PF13409 GST_N_2: Glutathione 99.7 1.2E-17 2.7E-22 98.6 6.0 63 1-63 3-70 (70)
36 cd03046 GST_N_GTT1_like GST_N 99.7 3E-17 6.5E-22 98.5 7.7 65 1-65 9-76 (76)
37 cd03045 GST_N_Delta_Epsilon GS 99.7 2.9E-17 6.2E-22 98.1 7.2 62 1-62 10-74 (74)
38 cd03041 GST_N_2GST_N GST_N fam 99.7 4.3E-17 9.2E-22 98.2 6.7 64 1-64 11-77 (77)
39 cd03044 GST_N_EF1Bgamma GST_N 99.7 5.4E-17 1.2E-21 97.2 6.7 62 1-62 10-74 (75)
40 cd03057 GST_N_Beta GST_N famil 99.7 9.2E-17 2E-21 96.7 7.3 64 2-65 10-77 (77)
41 cd03038 GST_N_etherase_LigE GS 99.7 8.3E-17 1.8E-21 98.5 6.6 64 1-65 17-84 (84)
42 cd03039 GST_N_Sigma_like GST_N 99.7 6.1E-17 1.3E-21 96.2 5.7 62 1-62 10-72 (72)
43 cd03047 GST_N_2 GST_N family, 99.7 1.1E-16 2.5E-21 95.3 6.9 61 1-61 10-73 (73)
44 cd03056 GST_N_4 GST_N family, 99.7 1.5E-16 3.3E-21 94.6 7.0 61 1-61 10-73 (73)
45 PF02798 GST_N: Glutathione S- 99.7 1.4E-16 3E-21 95.7 6.7 61 2-62 11-76 (76)
46 cd03049 GST_N_3 GST_N family, 99.7 1.6E-16 3.5E-21 94.6 6.4 61 1-61 10-73 (73)
47 cd03080 GST_N_Metaxin_like GST 99.7 1.9E-16 4.2E-21 94.8 6.4 58 1-65 18-75 (75)
48 KOG4244 Failed axon connection 99.7 5.2E-16 1.1E-20 110.4 9.5 153 1-164 62-268 (281)
49 cd03042 GST_N_Zeta GST_N famil 99.7 2.4E-16 5.3E-21 93.7 6.8 61 1-61 10-73 (73)
50 cd03075 GST_N_Mu GST_N family, 99.7 2.8E-16 6E-21 95.7 6.9 64 1-64 10-82 (82)
51 cd03055 GST_N_Omega GST_N fami 99.7 2.4E-16 5.2E-21 97.5 6.7 61 1-61 28-89 (89)
52 cd03037 GST_N_GRX2 GST_N famil 99.7 4.1E-16 8.8E-21 92.4 6.3 61 1-62 10-71 (71)
53 cd03051 GST_N_GTT2_like GST_N 99.6 4.9E-16 1.1E-20 92.5 6.3 61 1-61 10-74 (74)
54 cd03077 GST_N_Alpha GST_N fami 99.6 1.9E-15 4E-20 91.4 7.2 62 1-65 11-77 (79)
55 cd03040 GST_N_mPGES2 GST_N fam 99.6 3.3E-15 7.2E-20 89.8 5.6 63 1-65 11-77 (77)
56 cd03054 GST_N_Metaxin GST_N fa 99.6 8.9E-15 1.9E-19 86.8 6.1 56 1-63 17-72 (72)
57 cd00570 GST_N_family Glutathio 99.5 3.7E-14 8.1E-19 83.0 6.9 61 1-61 10-71 (71)
58 KOG3029 Glutathione S-transfer 99.5 2E-13 4.3E-18 98.1 10.0 157 1-163 100-349 (370)
59 cd03079 GST_N_Metaxin2 GST_N f 99.5 9.3E-14 2E-18 82.2 6.6 57 1-63 18-74 (74)
60 cd03201 GST_C_DHAR GST_C famil 99.5 1.4E-13 3E-18 89.8 7.7 94 71-164 3-96 (121)
61 cd03198 GST_C_CLIC GST_C famil 99.4 1.3E-12 2.8E-17 86.1 7.3 89 76-164 5-110 (134)
62 PF13410 GST_C_2: Glutathione 99.3 3.7E-12 8E-17 74.8 3.3 64 97-164 5-68 (69)
63 COG2999 GrxB Glutaredoxin 2 [P 99.2 3.9E-11 8.5E-16 80.9 7.6 139 1-143 10-185 (215)
64 KOG2903 Predicted glutathione 99.2 4.9E-11 1.1E-15 85.0 6.9 125 39-164 123-273 (319)
65 cd03200 GST_C_JTV1 GST_C famil 99.2 7.9E-11 1.7E-15 73.7 6.5 91 57-164 1-91 (96)
66 COG0435 ECM4 Predicted glutath 99.2 4.6E-11 9.9E-16 85.9 5.5 160 1-163 61-271 (324)
67 cd03203 GST_C_Lambda GST_C fam 99.2 6.7E-11 1.4E-15 77.0 5.6 92 72-164 2-97 (120)
68 PF00043 GST_C: Glutathione S- 99.2 5.8E-11 1.3E-15 73.9 5.1 62 97-164 27-89 (95)
69 cd03184 GST_C_Omega GST_C fami 99.1 2.9E-10 6.2E-15 74.4 7.7 72 93-164 27-99 (124)
70 cd03186 GST_C_SspA GST_N famil 99.1 1.6E-10 3.5E-15 73.5 6.0 62 97-164 34-95 (107)
71 cd03190 GST_C_ECM4_like GST_C 99.1 1.3E-10 2.8E-15 77.9 5.4 66 98-164 37-104 (142)
72 cd03196 GST_C_5 GST_C family, 99.1 2.5E-10 5.4E-15 73.8 6.4 65 96-164 39-103 (115)
73 PF14497 GST_C_3: Glutathione 99.1 6E-11 1.3E-15 74.6 3.0 62 96-164 33-95 (99)
74 KOG3027 Mitochondrial outer me 99.1 5.7E-09 1.2E-13 72.2 11.4 152 3-163 37-242 (257)
75 cd03185 GST_C_Tau GST_C family 99.0 5.3E-10 1.2E-14 73.1 6.0 66 97-164 34-101 (126)
76 cd03078 GST_N_Metaxin1_like GS 99.0 1.1E-09 2.3E-14 65.0 5.9 56 1-63 17-72 (73)
77 cd03177 GST_C_Delta_Epsilon GS 99.0 1.2E-09 2.7E-14 70.7 6.3 65 94-164 34-98 (118)
78 cd03202 GST_C_etherase_LigE GS 99.0 8.6E-10 1.9E-14 72.2 5.5 64 96-164 56-119 (124)
79 cd00299 GST_C_family Glutathio 99.0 1.1E-09 2.4E-14 68.2 4.6 64 97-164 35-98 (100)
80 cd03182 GST_C_GTT2_like GST_C 99.0 1.3E-09 2.9E-14 70.2 5.1 61 98-164 49-109 (117)
81 cd03183 GST_C_Theta GST_C fami 98.9 1.9E-09 4.1E-14 70.6 5.2 62 98-164 45-106 (126)
82 cd03188 GST_C_Beta GST_C famil 98.9 1.4E-09 3E-14 69.7 4.4 60 98-164 43-102 (114)
83 cd03193 GST_C_Metaxin GST_C fa 98.9 4.4E-10 9.5E-15 69.1 1.9 64 98-164 19-85 (88)
84 cd03204 GST_C_GDAP1 GST_C fami 98.9 2.5E-09 5.4E-14 68.4 5.2 66 97-164 28-103 (111)
85 cd03209 GST_C_Mu GST_C family, 98.9 2E-09 4.2E-14 70.1 4.7 60 99-164 36-95 (121)
86 TIGR02190 GlrX-dom Glutaredoxi 98.9 3.8E-09 8.3E-14 63.6 5.6 61 1-61 19-79 (79)
87 cd03189 GST_C_GTT1_like GST_C 98.9 2.1E-09 4.5E-14 69.6 4.6 58 100-164 56-113 (119)
88 cd03210 GST_C_Pi GST_C family, 98.9 1.8E-09 3.9E-14 70.8 4.3 62 98-164 35-98 (126)
89 cd03180 GST_C_2 GST_C family, 98.9 2.2E-09 4.9E-14 68.3 4.6 60 98-164 43-102 (110)
90 cd03187 GST_C_Phi GST_C family 98.9 1.5E-09 3.3E-14 70.0 3.7 61 99-164 46-106 (118)
91 cd03208 GST_C_Alpha GST_C fami 98.9 2.6E-09 5.7E-14 71.1 4.6 58 102-164 43-101 (137)
92 cd03178 GST_C_Ure2p_like GST_C 98.9 2.9E-09 6.2E-14 68.3 4.6 61 98-164 40-100 (113)
93 cd03179 GST_C_1 GST_C family, 98.9 2.1E-09 4.6E-14 67.9 3.9 60 98-164 43-102 (105)
94 cd03206 GST_C_7 GST_C family, 98.9 3.6E-09 7.9E-14 66.5 4.8 61 97-164 32-92 (100)
95 cd03207 GST_C_8 GST_C family, 98.9 3.4E-09 7.4E-14 66.9 4.7 60 97-164 29-88 (103)
96 cd03192 GST_C_Sigma_like GST_C 98.9 2.6E-09 5.5E-14 67.6 3.7 63 98-164 39-102 (104)
97 cd03197 GST_C_mPGES2 GST_C fam 98.8 1.7E-08 3.7E-13 67.4 6.4 109 48-164 29-141 (149)
98 cd03191 GST_C_Zeta GST_C famil 98.8 9.2E-09 2E-13 66.8 5.0 59 100-164 46-105 (121)
99 cd03211 GST_C_Metaxin2 GST_C f 98.8 6E-09 1.3E-13 68.4 3.4 72 92-164 51-123 (126)
100 cd03029 GRX_hybridPRX5 Glutare 98.7 4.2E-08 9.1E-13 57.9 6.1 61 1-61 12-72 (72)
101 PRK10638 glutaredoxin 3; Provi 98.7 3.8E-08 8.3E-13 59.8 5.7 60 1-60 13-73 (83)
102 cd03181 GST_C_EFB1gamma GST_C 98.6 2.3E-08 5E-13 65.0 2.9 63 98-164 40-102 (123)
103 cd03194 GST_C_3 GST_C family, 98.5 2.3E-07 5.1E-12 59.7 5.9 60 96-164 39-100 (114)
104 cd03205 GST_C_6 GST_C family, 98.5 2E-07 4.3E-12 58.3 4.5 60 98-164 37-96 (98)
105 cd03195 GST_C_4 GST_C family, 98.5 3.1E-07 6.8E-12 59.1 5.5 58 97-163 41-98 (114)
106 KOG3028 Translocase of outer m 98.4 2.4E-06 5.3E-11 62.9 9.4 153 1-163 18-228 (313)
107 cd03212 GST_C_Metaxin1_3 GST_C 98.4 9.3E-08 2E-12 63.6 1.8 66 96-164 62-130 (137)
108 cd03027 GRX_DEP Glutaredoxin ( 98.3 1.7E-06 3.8E-11 51.1 5.4 57 1-57 12-69 (73)
109 cd02066 GRX_family Glutaredoxi 98.3 2.1E-06 4.5E-11 50.0 5.2 59 1-59 11-70 (72)
110 PRK10329 glutaredoxin-like pro 98.2 2.5E-06 5.5E-11 51.5 4.6 50 1-50 12-61 (81)
111 cd02976 NrdH NrdH-redoxin (Nrd 98.2 3.8E-06 8.2E-11 49.1 5.3 52 1-52 11-63 (73)
112 TIGR02196 GlrX_YruB Glutaredox 98.2 5.9E-06 1.3E-10 48.3 5.3 60 1-60 11-73 (74)
113 PF10568 Tom37: Outer mitochon 98.1 1.3E-05 2.9E-10 47.2 5.2 53 1-60 15-71 (72)
114 COG0695 GrxC Glutaredoxin and 98.0 2.5E-05 5.5E-10 47.0 6.0 59 1-59 12-73 (80)
115 cd03418 GRX_GRXb_1_3_like Glut 98.0 1.9E-05 4.1E-10 46.7 5.2 60 1-60 11-72 (75)
116 TIGR02181 GRX_bact Glutaredoxi 98.0 2.5E-05 5.5E-10 46.7 5.6 61 1-61 10-71 (79)
117 TIGR02194 GlrX_NrdH Glutaredox 97.9 1.6E-05 3.5E-10 46.7 3.9 48 1-48 10-57 (72)
118 PF00462 Glutaredoxin: Glutare 97.8 1E-05 2.2E-10 45.9 1.7 50 1-50 10-60 (60)
119 TIGR02183 GRXA Glutaredoxin, G 97.8 0.00013 2.8E-09 44.5 6.1 65 1-65 11-83 (86)
120 cd03419 GRX_GRXh_1_2_like Glut 97.7 0.00018 3.9E-09 43.1 6.5 62 1-62 11-76 (82)
121 PRK11200 grxA glutaredoxin 1; 97.7 0.00016 3.4E-09 43.9 6.0 65 1-65 12-84 (85)
122 TIGR02189 GlrX-like_plant Glut 97.7 0.00031 6.7E-09 44.0 6.9 59 1-59 19-81 (99)
123 cd03028 GRX_PICOT_like Glutare 97.6 0.0002 4.4E-09 44.0 5.7 59 1-59 24-83 (90)
124 TIGR00365 monothiol glutaredox 97.6 0.00023 5.1E-09 44.4 5.7 59 1-59 28-87 (97)
125 TIGR02200 GlrX_actino Glutared 97.6 0.00011 2.3E-09 43.4 3.8 54 1-54 11-67 (77)
126 PF14834 GST_C_4: Glutathione 97.6 2.5E-05 5.4E-10 49.6 0.9 67 96-163 41-112 (117)
127 PHA03050 glutaredoxin; Provisi 97.5 0.00048 1E-08 43.9 6.5 58 1-58 24-88 (108)
128 TIGR02180 GRX_euk Glutaredoxin 97.5 0.00073 1.6E-08 40.5 7.0 61 1-61 10-76 (84)
129 cd03031 GRX_GRX_like Glutaredo 97.0 0.0025 5.4E-08 42.8 5.6 59 1-59 17-80 (147)
130 PRK10824 glutaredoxin-4; Provi 96.6 0.0091 2E-07 38.4 5.8 59 1-59 31-90 (115)
131 KOG1752 Glutaredoxin and relat 96.4 0.028 6E-07 35.5 7.1 59 1-59 25-87 (104)
132 KOG1147 Glutamyl-tRNA syntheta 95.9 0.01 2.2E-07 47.5 3.9 84 45-139 43-128 (712)
133 PTZ00062 glutaredoxin; Provisi 95.8 0.032 7E-07 39.6 5.7 58 1-58 129-187 (204)
134 PRK12759 bifunctional gluaredo 95.8 0.029 6.3E-07 44.1 5.9 58 1-58 13-79 (410)
135 cd03199 GST_C_GRX2 GST_C famil 95.6 0.1 2.2E-06 34.2 7.0 59 97-164 59-117 (128)
136 cd03030 GRX_SH3BGR Glutaredoxi 95.5 0.064 1.4E-06 33.1 5.5 56 3-58 19-79 (92)
137 PF04399 Glutaredoxin2_C: Glut 94.6 0.069 1.5E-06 35.2 4.0 58 98-164 59-116 (132)
138 PF11287 DUF3088: Protein of u 93.2 0.34 7.4E-06 30.8 5.0 51 16-66 43-109 (112)
139 cd02973 TRX_GRX_like Thioredox 93.1 0.25 5.4E-06 28.0 4.2 48 1-51 12-64 (67)
140 PF11801 Tom37_C: Tom37 C-term 89.2 0.72 1.6E-05 31.7 3.9 38 103-141 113-154 (168)
141 PF09635 MetRS-N: MetRS-N bind 89.0 0.4 8.7E-06 31.0 2.4 29 38-66 34-64 (122)
142 cd03036 ArsC_like Arsenate Red 87.0 0.75 1.6E-05 29.3 2.8 25 1-25 10-34 (111)
143 cd02977 ArsC_family Arsenate R 86.0 1.1 2.5E-05 28.0 3.2 24 1-24 10-33 (105)
144 cd01659 TRX_superfamily Thiore 83.8 1.8 3.8E-05 22.9 3.1 43 1-45 10-59 (69)
145 TIGR00412 redox_disulf_2 small 83.0 6 0.00013 23.1 5.2 46 1-50 11-60 (76)
146 PRK01655 spxA transcriptional 81.6 1.8 4E-05 28.4 2.9 24 1-24 11-34 (131)
147 cd03032 ArsC_Spx Arsenate Redu 78.9 2.6 5.7E-05 26.9 2.9 23 1-23 11-33 (115)
148 TIGR01617 arsC_related transcr 78.0 2.3 5E-05 27.2 2.4 23 1-23 10-32 (117)
149 PF13192 Thioredoxin_3: Thiore 75.7 8.1 0.00018 22.5 4.2 49 1-53 11-63 (76)
150 PF04908 SH3BGR: SH3-binding, 75.0 5.9 0.00013 24.8 3.6 51 3-53 20-80 (99)
151 PRK12559 transcriptional regul 74.6 4.1 8.9E-05 26.8 3.0 25 1-25 11-35 (131)
152 PRK13344 spxA transcriptional 71.9 5.8 0.00013 26.1 3.2 25 1-25 11-35 (132)
153 COG0278 Glutaredoxin-related p 68.9 22 0.00047 22.3 4.9 59 2-60 32-92 (105)
154 cd03035 ArsC_Yffb Arsenate Red 65.0 9.6 0.00021 23.9 3.0 23 2-24 11-33 (105)
155 TIGR00411 redox_disulf_1 small 63.2 25 0.00055 20.1 4.6 47 1-48 12-62 (82)
156 KOG2824 Glutaredoxin-related p 61.2 14 0.0003 27.6 3.6 56 3-58 150-210 (281)
157 cd03026 AhpF_NTD_C TRX-GRX-lik 61.0 22 0.00049 21.4 4.1 48 1-51 25-77 (89)
158 cd03033 ArsC_15kD Arsenate Red 58.5 15 0.00033 23.4 3.1 22 2-23 12-33 (113)
159 KOG1668 Elongation factor 1 be 57.2 12 0.00026 27.2 2.6 33 104-137 10-42 (231)
160 TIGR01616 nitro_assoc nitrogen 57.2 18 0.00039 23.6 3.3 21 3-23 14-34 (126)
161 PRK10853 putative reductase; P 52.2 16 0.00035 23.5 2.5 21 3-23 13-33 (118)
162 PRK09266 hypothetical protein; 50.4 22 0.00049 26.1 3.3 60 9-68 200-262 (266)
163 PHA02125 thioredoxin-like prot 49.7 34 0.00073 19.6 3.4 41 2-45 12-52 (75)
164 COG1393 ArsC Arsenate reductas 49.3 30 0.00064 22.3 3.3 21 3-23 14-34 (117)
165 PF05768 DUF836: Glutaredoxin- 48.3 55 0.0012 19.2 6.5 44 2-47 12-57 (81)
166 PF03960 ArsC: ArsC family; I 46.7 18 0.00039 22.7 2.1 21 3-23 9-29 (110)
167 PRK10026 arsenate reductase; P 43.4 37 0.00081 22.7 3.2 21 3-23 15-35 (141)
168 cd04911 ACT_AKiii-YclM-BS_1 AC 42.4 25 0.00055 20.8 2.1 22 2-23 17-38 (76)
169 TIGR02681 phage_pRha phage reg 42.4 27 0.00059 22.1 2.3 26 40-65 2-28 (108)
170 cd03034 ArsC_ArsC Arsenate Red 42.1 29 0.00062 22.0 2.5 21 3-23 12-32 (112)
171 TIGR00014 arsC arsenate reduct 41.1 43 0.00093 21.2 3.2 21 3-23 12-32 (114)
172 TIGR01764 excise DNA binding d 35.3 64 0.0014 16.2 3.1 25 37-61 24-48 (49)
173 PF08159 NUC153: NUC153 domain 32.4 37 0.0008 16.2 1.4 21 18-38 9-29 (30)
174 PF09314 DUF1972: Domain of un 30.0 50 0.0011 23.2 2.3 18 48-65 156-173 (185)
175 KOG0911 Glutaredoxin-related p 29.5 1.7E+02 0.0038 21.3 4.9 58 2-59 156-214 (227)
176 PRK15371 effector protein YopJ 28.3 1.2E+02 0.0026 23.0 4.1 42 98-141 23-64 (287)
177 PF13344 Hydrolase_6: Haloacid 27.3 92 0.002 19.2 3.0 63 3-68 19-82 (101)
178 PF12728 HTH_17: Helix-turn-he 26.8 1E+02 0.0023 15.9 3.3 27 37-63 24-50 (51)
179 PF10022 DUF2264: Uncharacteri 26.5 2.1E+02 0.0045 22.5 5.3 101 40-141 98-214 (361)
180 PHA02776 E7 protein; Provision 24.1 32 0.0007 21.6 0.4 13 121-133 1-13 (101)
181 PF00731 AIRC: AIR carboxylase 24.0 62 0.0014 21.9 1.8 24 1-24 14-37 (150)
182 COG2176 PolC DNA polymerase II 23.9 3.8E+02 0.0082 25.1 6.7 92 48-139 797-905 (1444)
183 TIGR01162 purE phosphoribosyla 23.2 1E+02 0.0023 21.0 2.8 25 1-25 12-36 (156)
184 COG4545 Glutaredoxin-related p 22.6 1.8E+02 0.004 17.3 4.3 50 2-51 14-77 (85)
185 cd00449 PLPDE_IV PyridoxaL 5'- 21.6 83 0.0018 22.8 2.3 54 9-62 196-254 (256)
186 PF15643 Tox-PL-2: Papain fold 21.6 1.6E+02 0.0036 18.4 3.2 30 2-31 24-53 (100)
187 PF06603 UpxZ: UpxZ family of 21.4 2.3E+02 0.0049 17.9 4.1 59 56-114 34-92 (106)
188 cd05565 PTS_IIB_lactose PTS_II 21.3 1.6E+02 0.0034 18.3 3.1 23 3-25 17-39 (99)
189 PF15608 PELOTA_1: PELOTA RNA 20.7 97 0.0021 19.4 2.1 20 1-20 67-86 (100)
No 1
>PLN02378 glutathione S-transferase DHAR1
Probab=100.00 E-value=2.2e-34 Score=205.40 Aligned_cols=164 Identities=65% Similarity=1.146 Sum_probs=136.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCCChHHHhhhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRTPPEKASVGS 80 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~~~ 80 (164)
|||+|++++|+++|++|+.+.+|+..++++|+++||.|++|+|++||.+|+||.+|++||+++++...+.++.+++++.+
T Consensus 21 p~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~l~inP~G~VPvL~~~~~~l~ES~aI~~YL~~~~~~~~l~~~~~~a~i~~ 100 (213)
T PLN02378 21 PFSQRALLTLEEKSLTYKIHLINLSDKPQWFLDISPQGKVPVLKIDDKWVTDSDVIVGILEEKYPDPPLKTPAEFASVGS 100 (213)
T ss_pred cchHHHHHHHHHcCCCCeEEEeCcccCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 89999999999999999999999988888999999999999999999999999999999999998766666778888887
Q ss_pred hhHHHHHhhhcCCCCCchHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhh
Q 040329 81 KIFSMFIGFLKSKDPSDGSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHV 159 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l 159 (164)
.++..+..+.......+.....+.+.+..+|++|.+ +++|++|+++|+||+++++++.++....+.+.++...+.+|+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~~~~~~~~p~l 180 (213)
T PLN02378 101 NIFGTFGTFLKSKDSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKSWSVPESFPHV 180 (213)
T ss_pred HHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcCCCchhHhHHH
Confidence 776655544444333445556788899999999963 5799999999999999999998876543434444455889999
Q ss_pred hhhcC
Q 040329 160 KSYMK 164 (164)
Q Consensus 160 ~~w~~ 164 (164)
.+|++
T Consensus 181 ~~w~~ 185 (213)
T PLN02378 181 HNYMK 185 (213)
T ss_pred HHHHH
Confidence 99974
No 2
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=100.00 E-value=3.2e-34 Score=209.67 Aligned_cols=164 Identities=89% Similarity=1.437 Sum_probs=140.9
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCCChHHHhhhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRTPPEKASVGS 80 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~~~ 80 (164)
|||+|++++|+++|++|+.+.+++.+++++|+++||.|++|+|+++|.+|+||.+|++||+++++.+.+.++.+++++.+
T Consensus 74 p~s~rV~i~L~ekgi~ye~~~vdl~~~~~~fl~iNP~GkVPvL~~d~~~L~ES~aI~~YL~e~~p~~~L~~~~era~i~~ 153 (265)
T PLN02817 74 PFCQRVLLTLEEKHLPYDMKLVDLTNKPEWFLKISPEGKVPVVKLDEKWVADSDVITQALEEKYPDPPLATPPEKASVGS 153 (265)
T ss_pred cHHHHHHHHHHHcCCCCEEEEeCcCcCCHHHHhhCCCCCCCEEEECCEEEecHHHHHHHHHHHCCCCCCCCHHHHHHHHH
Confidence 89999999999999999999999988889999999999999999999999999999999999999877777888999998
Q ss_pred hhHHHHHhhhcCCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhh
Q 040329 81 KIFSMFIGFLKSKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVK 160 (164)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~ 160 (164)
+++..+..+.......+...+.+.+.+..+|+.|+++++|++|+++|+||+++++.+.++......+.++...+.+|+|.
T Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~~~~~~~~i~~~~P~L~ 233 (265)
T PLN02817 154 KIFSTFIGFLKSKDPGDGTEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIALGHYKNWSVPDSLPFVK 233 (265)
T ss_pred HHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCccccCHHHH
Confidence 88777665555444344455678889999999997557999999999999999999988875444445566668899999
Q ss_pred hhcC
Q 040329 161 SYMK 164 (164)
Q Consensus 161 ~w~~ 164 (164)
+|++
T Consensus 234 ~w~~ 237 (265)
T PLN02817 234 SYMK 237 (265)
T ss_pred HHHH
Confidence 9974
No 3
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=100.00 E-value=3.4e-32 Score=195.29 Aligned_cols=163 Identities=27% Similarity=0.512 Sum_probs=129.4
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCC---CCCCCh--HH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDP---PLRTPP--EK 75 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~---~~~~~~--~~ 75 (164)
|||+|+|++|.++|++|+.+.+|+..++++|+++||.|++|+|+++|.+|+||.+|++||+++++.+ .+.+.. .+
T Consensus 20 p~~~rv~i~L~ekgi~~e~~~vd~~~~~~~fl~inP~g~vPvL~~~g~~l~ES~aI~eYL~e~~~~~~~p~l~p~~~~~~ 99 (236)
T TIGR00862 20 PFSQRLFMILWLKGVVFNVTTVDLKRKPEDLQNLAPGTHPPFLTYNTEVKTDVNKIEEFLEETLCPPRYPKLSPKHPESN 99 (236)
T ss_pred HhHHHHHHHHHHcCCCcEEEEECCCCCCHHHHHHCcCCCCCEEEECCEEeecHHHHHHHHHHHcCCCCCCCCCCCCHHHH
Confidence 7999999999999999999999999888999999999999999999999999999999999999753 223321 22
Q ss_pred HhhhhhhHHHHHhhhcCCCC--CchHHHHHHHHHHHHHHhhhh-----------------cCCcccCCCCCcchhhhhhh
Q 040329 76 ASVGSKIFSMFIGFLKSKDP--SDGSEQALLNELNSFNDYIKE-----------------NGPFIIGGKVSAADLSLGPK 136 (164)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~le~~L~~-----------------~~~~l~G~~~t~aD~~l~~~ 136 (164)
+.. ..++..+..+..+... .+...+.+.+.+..+|+.|.+ +++|+.|+++|+|||++++.
T Consensus 100 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~ 178 (236)
T TIGR00862 100 TAG-LDIFAKFSAYIKNSNPEANDNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPK 178 (236)
T ss_pred HHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHH
Confidence 211 2233444333333221 233445688999999999962 57999999999999999999
Q ss_pred hHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 137 FYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+.++.....++.++++.+++|+|++|++
T Consensus 179 l~~l~~~~~~~~~~~i~~~~p~l~~w~~ 206 (236)
T TIGR00862 179 LHIVKVVAKKYRNFDIPAEFTGVWRYLS 206 (236)
T ss_pred HHHHHHHHHHHhCcCccccCchHHHHHH
Confidence 9999876555677777899999999984
No 4
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=100.00 E-value=5e-32 Score=192.99 Aligned_cols=158 Identities=21% Similarity=0.416 Sum_probs=125.4
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCC--ChHHHhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRT--PPEKASV 78 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~--~~~~~~~ 78 (164)
|+|+++|++|+++|++|+.+.+|..+++++|+++||.|++|+|++||.+|+||.||++||+++++...+.| +.+++++
T Consensus 20 ~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~nP~g~VPvL~~~g~~l~ES~AIl~YL~~~~~~~~l~p~~~~~ra~~ 99 (211)
T PRK09481 20 IYSHQVRIVLAEKGVSVEIEQVEKDNLPQDLIDLNPYQSVPTLVDRELTLYESRIIMEYLDERFPHPPLMPVYPVARGES 99 (211)
T ss_pred hhHHHHHHHHHHCCCCCEEEeCCcccCCHHHHHhCCCCCCCEEEECCEEeeCHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 68999999999999999999999988888999999999999999999999999999999999998766665 4567777
Q ss_pred hhhhHHH---HHhh---hcCCC--CCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC
Q 040329 79 GSKIFSM---FIGF---LKSKD--PSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW 150 (164)
Q Consensus 79 ~~~~~~~---~~~~---~~~~~--~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~ 150 (164)
..|+... +... ..... ..+...+.+.+.+..+|++|. +++|++|+++|+||+++++.+.++... +.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~-~~~~l~G~~~t~AD~~l~~~~~~~~~~-----~~ 173 (211)
T PRK09481 100 RLMMHRIEKDWYSLMNKIVNGSASEADAARKQLREELLAIAPVFG-EKPYFMSEEFSLVDCYLAPLLWRLPVL-----GI 173 (211)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhc-cCCcccCCCccHHHHHHHHHHHHHHhc-----CC
Confidence 7665421 1111 11111 123445678888999999996 679999999999999999999776532 22
Q ss_pred CCC-CCchhhhhhcC
Q 040329 151 SVP-DSLPHVKSYMK 164 (164)
Q Consensus 151 ~~~-~~~p~l~~w~~ 164 (164)
+.. +.+|+|.+|++
T Consensus 174 ~~~~~~~p~l~~w~~ 188 (211)
T PRK09481 174 ELSGPGAKELKGYMT 188 (211)
T ss_pred CCCCCCChhHHHHHH
Confidence 232 57899999974
No 5
>KOG0406 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=6.1e-31 Score=185.13 Aligned_cols=164 Identities=24% Similarity=0.453 Sum_probs=135.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcC-CCCCCceEEeCCeeecchHHHHHHHHhhCC-CCCCCC--ChHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKIS-PEGKVPVIKLDEKWLPDSDVITQSLEEKYP-DPPLRT--PPEKA 76 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~-p~~~~P~L~~~~~~i~es~aI~~yL~~~~~-~~~~~~--~~~~~ 76 (164)
||++|+||+|+++||+|+.+..|+.++++++++.| +.+++|||+++|++|.||..|++||++.++ +++++| +.+|+
T Consensus 19 Pfa~R~~iaL~~KgI~yE~veedl~~Ks~~ll~~np~hkKVPvL~Hn~k~i~ESliiveYiDe~w~~~~~iLP~DPy~Ra 98 (231)
T KOG0406|consen 19 PFAQRVRIALKLKGIPYEYVEEDLTNKSEWLLEKNPVHKKVPVLEHNGKPICESLIIVEYIDETWPSGPPILPSDPYERA 98 (231)
T ss_pred hHHHHHHHHHHhcCCceEEEecCCCCCCHHHHHhccccccCCEEEECCceehhhHHHHHHHHhhccCCCCCCCCCHHHHH
Confidence 89999999999999999999999999999999999 689999999999999999999999999999 588876 56777
Q ss_pred hhhhhhH---HH----HHhhhc--CCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhcc
Q 040329 77 SVGSKIF---SM----FIGFLK--SKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHY 147 (164)
Q Consensus 77 ~~~~~~~---~~----~~~~~~--~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~ 147 (164)
+.+.|+. .. ...... .....+...+.+.+.|..+|+.|.++++|+.|+++++.|+++++++..+......+
T Consensus 99 ~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi~~~p~~~~~~~~~~~~ 178 (231)
T KOG0406|consen 99 QARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDIAIGPSFERWLAVLEKF 178 (231)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhhhHHhhHHHHHHHHHHh
Confidence 7776652 11 111122 22345667788999999999999768899999999999999998887776555444
Q ss_pred C--CCCCCCCchhhhhhcC
Q 040329 148 K--NWSVPDSLPHVKSYMK 164 (164)
Q Consensus 148 ~--~~~~~~~~p~l~~w~~ 164 (164)
. .....+.+|+|.+|++
T Consensus 179 ~~~~~~~~~~~P~L~~W~~ 197 (231)
T KOG0406|consen 179 GGVKFIIEEETPKLIKWIK 197 (231)
T ss_pred cCcccCCCCCCccHHHHHH
Confidence 4 3344588999999974
No 6
>KOG1422 consensus Intracellular Cl- channel CLIC, contains GST domain [Inorganic ion transport and metabolism]
Probab=99.97 E-value=4.6e-29 Score=170.71 Aligned_cols=164 Identities=52% Similarity=0.918 Sum_probs=151.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCC--ChHHHhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRT--PPEKASV 78 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~--~~~~~~~ 78 (164)
||||++.|.|.++|++|+...||+..++++|+++.|.|++|+|..|+..++||..|.++|++.++.+.... +.|.+.+
T Consensus 22 pf~qr~~m~L~~k~~~f~vttVd~~~kp~~f~~~sp~~~~P~l~~d~~~~tDs~~Ie~~Lee~l~~p~~~~~~~~E~asa 101 (221)
T KOG1422|consen 22 PFCQRLFMTLELKGVPFKVTTVDLSRKPEWFLDISPGGKPPVLKFDEKWVTDSDKIEEFLEEKLPPPKLPTLAPPESASA 101 (221)
T ss_pred hhHHHHHHHHHHcCCCceEEEeecCCCcHHHHhhCCCCCCCeEEeCCceeccHHHHHHHHHHhcCCCCCcccCCHHHHhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999776543 8899999
Q ss_pred hhhhHHHHHhhhcCCCC--CchHHHHHHHHHHHHHHhhhh--cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCC
Q 040329 79 GSKIFSMFIGFLKSKDP--SDGSEQALLNELNSFNDYIKE--NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPD 154 (164)
Q Consensus 79 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~le~~L~~--~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~ 154 (164)
...++..+..++....+ .+..+..+.+.|..|+++|+. .++|+.||++|.|||.+++-|+.++.+.++|++|.+++
T Consensus 102 g~diF~kF~~fi~ksk~~~n~~~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~k~yk~~~IP~ 181 (221)
T KOG1422|consen 102 GSDIFAKFSAFIKKSKDAANDGLEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAAKHYKNFEIPA 181 (221)
T ss_pred HHHHHHHHHHHHhCchhhccchHHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHHHHhcCCCCch
Confidence 99999999999755443 467788999999999999983 58999999999999999999999999999999999999
Q ss_pred CchhhhhhcC
Q 040329 155 SLPHVKSYMK 164 (164)
Q Consensus 155 ~~p~l~~w~~ 164 (164)
+++++++|++
T Consensus 182 ~lt~V~rYl~ 191 (221)
T KOG1422|consen 182 SLTGVWRYLK 191 (221)
T ss_pred hhhHHHHHHH
Confidence 9999999973
No 7
>PRK15113 glutathione S-transferase; Provisional
Probab=99.97 E-value=5.5e-29 Score=177.70 Aligned_cols=154 Identities=20% Similarity=0.310 Sum_probs=118.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCC---CCC--C
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPP---LRT--P 72 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~---~~~--~ 72 (164)
|||+|++++|+++||+|+.+.++..+ ..++|+++||.|++|+|++||.+|+||.||++||+++++... +.| +
T Consensus 17 ~~~~rv~~~l~e~gi~~e~~~v~~~~~~~~~~~~~~~nP~g~VP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~~l~p~~~ 96 (214)
T PRK15113 17 PYVMSAFVALQEKGLPFELKTVDLDAGEHLQPTYQGYSLTRRVPTLQHDDFELSESSAIAEYLEERFAPPAWERIYPADL 96 (214)
T ss_pred chHHHHHHHHHHcCCCCeEEEeCCCCccccCHHHHhcCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCCCccccCCCCH
Confidence 68999999999999999999999764 457899999999999999999999999999999999998654 665 4
Q ss_pred hHHHhhhhhhHHH---HHh---------hhcC---CCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhh
Q 040329 73 PEKASVGSKIFSM---FIG---------FLKS---KDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKF 137 (164)
Q Consensus 73 ~~~~~~~~~~~~~---~~~---------~~~~---~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l 137 (164)
.+++++.+|+... +.. +... ....+...+.+.+.+..+|++|.++++|++|+ +|+||+++++.+
T Consensus 97 ~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l 175 (214)
T PRK15113 97 QARARARQIQAWLRSDLMPLREERPTDVVFAGAKKAPLSEAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALML 175 (214)
T ss_pred HHHHHHHHHHHHHHhhhHHHhccCccchhccCCCCCcccHHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHH
Confidence 5778888776432 111 0111 11124456678899999999997445799996 999999999999
Q ss_pred HHHHHhhhccCCCCCCCCchhhhhhc
Q 040329 138 YHLEIALGHYKNWSVPDSLPHVKSYM 163 (164)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~p~l~~w~ 163 (164)
.++... +... .|+|.+|+
T Consensus 176 ~~~~~~-----~~~~---~p~l~~~~ 193 (214)
T PRK15113 176 NRLVLH-----GDEV---PERLADYA 193 (214)
T ss_pred HHHHHc-----CCCC---CHHHHHHH
Confidence 876531 1111 17777775
No 8
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=99.96 E-value=5.9e-29 Score=177.63 Aligned_cols=155 Identities=25% Similarity=0.280 Sum_probs=116.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEe-----CC--eeecchHHHHHHHHhhCCCCCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKL-----DE--KWLPDSDVITQSLEEKYPDPPLR 70 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~-----~~--~~i~es~aI~~yL~~~~~~~~~~ 70 (164)
|+|+|++++|+++||+|+.+.+++.. ..++|+++||.|++|+|++ || .+|+||.||++||+++++. +.
T Consensus 10 ~~~~~v~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~iNP~gkVP~L~~~~~~d~g~~~~L~ES~AI~~YL~~~~~~--l~ 87 (215)
T PRK13972 10 PNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFLRISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGL--FL 87 (215)
T ss_pred CChHHHHHHHHHcCCCcEEEEecCcccccCCHHHHhhCcCCCCCEEEeCCCCCCCCceeEEcHHHHHHHHHHhcCC--CC
Confidence 68999999999999999999998754 3578999999999999997 45 4799999999999999862 33
Q ss_pred C--ChHHHhhhhhhHHHH---Hhhh------c--CCC-C---CchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhh
Q 040329 71 T--PPEKASVGSKIFSMF---IGFL------K--SKD-P---SDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSL 133 (164)
Q Consensus 71 ~--~~~~~~~~~~~~~~~---~~~~------~--~~~-~---~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l 133 (164)
| +.+++++.+|+.... .... . ... . .+.....+.+.+..+|++|. +++|++|+++|+||+++
T Consensus 88 p~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~Gd~~t~ADi~l 166 (215)
T PRK13972 88 SHETRERAATLQWLFWQVGGLGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLE-NSPWLGGENYSIADIAC 166 (215)
T ss_pred CCCHHHHHHHHHHHHHHhhccCcceeeeeeeeccCCCCCchHHHHHHHHHHHHHHHHHHHhc-cCccccCCCCCHHHHHH
Confidence 3 567888888874321 1110 0 011 1 12234567788999999996 67999999999999999
Q ss_pred hhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 134 GPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 134 ~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
++.+..+... ... .+.+|+|.+|++
T Consensus 167 ~~~~~~~~~~-----~~~-~~~~P~l~~w~~ 191 (215)
T PRK13972 167 WPWVNAWTRQ-----RID-LAMYPAVKNWHE 191 (215)
T ss_pred HHHHHHHhhc-----CCc-chhCHHHHHHHH
Confidence 8877544321 122 378999999974
No 9
>PLN02473 glutathione S-transferase
Probab=99.96 E-value=1.1e-28 Score=176.00 Aligned_cols=160 Identities=23% Similarity=0.254 Sum_probs=120.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCC--CCCC--Ch
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDP--PLRT--PP 73 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~--~~~~--~~ 73 (164)
|+|+|++++|+++|++|+.+.++..+ ..++++++||.|++|+|++||.+|+||.||++||+++++.. ++.| +.
T Consensus 12 ~~~~rv~~~L~e~gi~ye~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~ 91 (214)
T PLN02473 12 ANPQRVLLCFLEKGIEFEVIHVDLDKLEQKKPEHLLRQPFGQVPAIEDGDLKLFESRAIARYYATKYADQGTDLLGKTLE 91 (214)
T ss_pred CchHHHHHHHHHcCCCceEEEecCcccccCCHHHHhhCCCCCCCeEEECCEEEEehHHHHHHHHHHcCCcCCCCCCCCHH
Confidence 68999999999999999999998763 56778999999999999999999999999999999999743 4555 35
Q ss_pred HHHhhhhhhHHH---H---------Hhhhc--CCCCC-----chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhh
Q 040329 74 EKASVGSKIFSM---F---------IGFLK--SKDPS-----DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLG 134 (164)
Q Consensus 74 ~~~~~~~~~~~~---~---------~~~~~--~~~~~-----~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~ 134 (164)
+++++.+|+... + ...+. ..... +.....+.+.++.+|+.|+ +++|++|+++|+||++++
T Consensus 92 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~Gd~~t~ADi~~~ 170 (214)
T PLN02473 92 HRAIVDQWVEVENNYFYAVALPLVINLVFKPRLGEPCDVALVEELKVKFDKVLDVYENRLA-TNRYLGGDEFTLADLTHM 170 (214)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHhcccccCCCChHHHHHHHHHHHHHHHHHHHHhc-cCCcccCCCCCHHHHHHH
Confidence 677777765311 1 01111 11111 2234567788999999996 578999999999999999
Q ss_pred hhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 135 PKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 135 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+.+.++..... .....+.+|+|.+|++
T Consensus 171 ~~~~~~~~~~~---~~~~~~~~P~l~~w~~ 197 (214)
T PLN02473 171 PGMRYIMNETS---LSGLVTSRENLNRWWN 197 (214)
T ss_pred HHHHHHHhccc---cHHHHhcCHHHHHHHH
Confidence 99876543211 1113478999999974
No 10
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=99.96 E-value=7.6e-29 Score=176.35 Aligned_cols=158 Identities=26% Similarity=0.443 Sum_probs=121.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC----CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCC--ChH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG----NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRT--PPE 74 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~----~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~--~~~ 74 (164)
|+|+++|++|+++||+|+.+.++.. ..+++++++||.|++|+|++||.+|+||.+|++||+++++...+.| +.+
T Consensus 9 ~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~ES~aI~~yl~~~~~~~~l~p~~~~~ 88 (210)
T TIGR01262 9 SCSYRVRIALALKGIDYEYVPVNLLRDGEQRSPEFLALNPQGLVPTLDIDGEVLTQSLAIIEYLEETYPDPPLLPADPIK 88 (210)
T ss_pred CchHHHHHHHHHCCCCceEEecccccccccCChhhhhcCCCCcCCEEEECCEEeecHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 7899999999999999999999862 2467799999999999999999999999999999999998766655 457
Q ss_pred HHhhhhhhHHH---H--------HhhhcCC-CC-C----chHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhh
Q 040329 75 KASVGSKIFSM---F--------IGFLKSK-DP-S----DGSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPK 136 (164)
Q Consensus 75 ~~~~~~~~~~~---~--------~~~~~~~-~~-~----~~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~ 136 (164)
++++.+|+... + ....... .. . +...+.+.+.++.+|++|.+ +++|++|+++|+||++++++
T Consensus 89 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~ 168 (210)
T TIGR01262 89 RARVRALALLIACDIHPLNNLRVLQYLREKLGVEEEARNRWYQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQ 168 (210)
T ss_pred HHHHHHHHHHHhcccChhhhhhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHH
Confidence 77777775321 1 1111111 11 1 12334578889999999974 35799999999999999999
Q ss_pred hHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 137 FYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+.++... .. ..+.+|+|++|++
T Consensus 169 l~~~~~~-----~~-~~~~~p~l~~~~~ 190 (210)
T TIGR01262 169 VYNAERF-----GV-DLTPYPTLRRIAA 190 (210)
T ss_pred HHHHHHc-----CC-CcccchHHHHHHH
Confidence 9876421 11 2378999999974
No 11
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.1e-28 Score=175.79 Aligned_cols=157 Identities=29% Similarity=0.549 Sum_probs=121.3
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC--CCchhhhhcCCCCCCceEEeCCe-eecchHHHHHHHHhhCCCCCCCCCh----
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG--NKPEWFLKISPEGKVPVIKLDEK-WLPDSDVITQSLEEKYPDPPLRTPP---- 73 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~--~~~~~~~~~~p~~~~P~L~~~~~-~i~es~aI~~yL~~~~~~~~~~~~~---- 73 (164)
|||+|++++|.++|++|+.+.++.. ..+++|+++||.|++|+|++++. +|+||.||++||+++|+..++.|..
T Consensus 10 p~~~kv~l~l~e~g~~ye~~~v~~~~~~~~~~~~~~nP~gkVPvL~~~~~~~l~ES~AI~~YL~~~~~~~~l~p~~~~~r 89 (211)
T COG0625 10 PYSRKVRLALEEKGLPYEIVLVDLDAEQKPPDFLALNPLGKVPALVDDDGEVLTESGAILEYLAERYPGPPLLPADPLAR 89 (211)
T ss_pred cchHHHHHHHHHcCCCceEEEeCcccccCCHHHHhcCCCCCCCEEeeCCCCeeecHHHHHHHHHhhCCCCCcCCCCchhH
Confidence 7999999999999999999999987 47788999999999999998776 8999999999999999976555522
Q ss_pred -HHHhhhhhhHHH-------HHhhhcC----CCC-----CchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhh
Q 040329 74 -EKASVGSKIFSM-------FIGFLKS----KDP-----SDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPK 136 (164)
Q Consensus 74 -~~~~~~~~~~~~-------~~~~~~~----~~~-----~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~ 136 (164)
+++.+..|+... +...... ... .+...+.+.+.++.+|+.|+ +++|++|+++|+||+++++.
T Consensus 90 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~tiAD~~~~~~ 168 (211)
T COG0625 90 RARALLLWWLFFAASDLHPVIGQRRRALLGSEPELLEAALEAARAEIRALLALLEALLA-DGPYLAGDRFTIADIALAPL 168 (211)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHhc-cCCcccCCCCCHHHHHHHHH
Confidence 555555664321 1111111 111 12345578888999999996 58999999999999999999
Q ss_pred hHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 137 FYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+.++... +... +.+|+|.+|++
T Consensus 169 ~~~~~~~-----~~~~-~~~p~l~~w~~ 190 (211)
T COG0625 169 LWRLALL-----GEEL-ADYPALKAWYE 190 (211)
T ss_pred HHHhhhc-----Cccc-ccChHHHHHHH
Confidence 9875432 1122 78999999974
No 12
>PRK10542 glutathionine S-transferase; Provisional
Probab=99.96 E-value=1.2e-28 Score=174.19 Aligned_cols=156 Identities=20% Similarity=0.300 Sum_probs=120.0
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCC----CchhhhhcCCCCCCceEE-eCCeeecchHHHHHHHHhhCCCCCCC-C--Ch
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGN----KPEWFLKISPEGKVPVIK-LDEKWLPDSDVITQSLEEKYPDPPLR-T--PP 73 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~----~~~~~~~~~p~~~~P~L~-~~~~~i~es~aI~~yL~~~~~~~~~~-~--~~ 73 (164)
++++++++|+++||+|+.+.+++.. .+++++++||.|++|+|+ +||.+|+||.+|++||+++++...+. + +.
T Consensus 10 ~~~~~~~~L~~~gi~~e~~~v~~~~~~~~~~~~~~~~nP~g~vPvL~~~~g~~l~eS~aI~~YL~~~~~~~~l~~p~~~~ 89 (201)
T PRK10542 10 CSLASHITLRESGLDFTLVSVDLAKKRLENGDDYLAINPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVGSL 89 (201)
T ss_pred HHHHHHHHHHHcCCCceEEEeecccccccCChHHHHhCcCCCCCeEEeCCCcEeecHHHHHHHHHHhCcccccCCCCCcH
Confidence 5889999999999999999998753 346899999999999998 57899999999999999999866544 3 45
Q ss_pred HHHhhhhhhHHHH---H----hhhcCCCCC---chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHh
Q 040329 74 EKASVGSKIFSMF---I----GFLKSKDPS---DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIA 143 (164)
Q Consensus 74 ~~~~~~~~~~~~~---~----~~~~~~~~~---~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~ 143 (164)
+++++.+|+.... . ..+...... +.....+.+.+..+|+.|. +++|++|+++|+||+++++.+.+....
T Consensus 90 ~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~s~ADi~l~~~~~~~~~~ 168 (201)
T PRK10542 90 SRYHTIEWLNYIATELHKGFTPLFRPDTPEEYKPTVRAQLEKKFQYVDEALA-DEQWICGQRFTIADAYLFTVLRWAYAV 168 (201)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhccCCCChHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCCCcHHhHHHHHHHHHhhcc
Confidence 7777777764321 1 122111111 2334678888999999996 678999999999999999998776431
Q ss_pred hhccCCCCCCCCchhhhhhcC
Q 040329 144 LGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 144 ~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+.. .+.+|+|.+|++
T Consensus 169 -----~~~-~~~~p~l~~w~~ 183 (201)
T PRK10542 169 -----KLN-LEGLEHIAAYMQ 183 (201)
T ss_pred -----CCC-cccchHHHHHHH
Confidence 222 367999999974
No 13
>PLN02395 glutathione S-transferase
Probab=99.96 E-value=2.2e-28 Score=174.58 Aligned_cols=160 Identities=24% Similarity=0.261 Sum_probs=120.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCC--CCCC--Ch
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDP--PLRT--PP 73 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~--~~~~--~~ 73 (164)
++++|++++|+++|++|+.+.++.. ..+++++++||.|++|+|+++|.+|+||.+|++||+++++.. ++.| +.
T Consensus 11 ~~~~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~ES~aI~~YL~~~~~~~~~~l~p~~~~ 90 (215)
T PLN02395 11 ASPKRALVTLIEKGVEFETVPVDLMKGEHKQPEYLALQPFGVVPVIVDGDYKIFESRAIMRYYAEKYRSQGPDLLGKTIE 90 (215)
T ss_pred CcHHHHHHHHHHcCCCceEEEeccccCCcCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHHHcCCCCcCcCCCChh
Confidence 3689999999999999999999875 356789999999999999999999999999999999999742 4555 45
Q ss_pred HHHhhhhhhHHH-------HHh-----hhc----CCCC---CchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhh
Q 040329 74 EKASVGSKIFSM-------FIG-----FLK----SKDP---SDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLG 134 (164)
Q Consensus 74 ~~~~~~~~~~~~-------~~~-----~~~----~~~~---~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~ 134 (164)
+++++.+|+... +.. .+. .... .+...+.+.+.+..+|+.|+ +++|++|+++|+||++++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~s~ADi~l~ 169 (215)
T PLN02395 91 ERGQVEQWLDVEATSYHPPLLNLTLHILFASKMGFPADEKVIKESEEKLAKVLDVYEARLS-KSKYLAGDFVSLADLAHL 169 (215)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCcCHHHHHHH
Confidence 677777775421 111 011 1111 12345567888999999996 578999999999999999
Q ss_pred hhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 135 PKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 135 ~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+++.++.... ......+.+|+|.+|++
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~p~L~~w~~ 196 (215)
T PLN02395 170 PFTEYLVGPI---GKAYLIKDRKHVSAWWD 196 (215)
T ss_pred HHHHHHhccc---chhhhhccCchHHHHHH
Confidence 9887664211 11123477899999974
No 14
>KOG0868 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.9e-27 Score=158.91 Aligned_cols=140 Identities=29% Similarity=0.503 Sum_probs=112.1
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCC----CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCC--ChHH
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGN----KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRT--PPEK 75 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~----~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~--~~~~ 75 (164)
+++|+|++|+.+||+|+.+.+++-. ...+|+++||++++|+|++||.+|+||.||++||++.+|.++++| +..|
T Consensus 16 CswRVRiALaLK~iDYey~PvnLlk~~~q~~~ef~~iNPm~kVP~L~i~g~tl~eS~AII~YLeEt~P~ppLLP~d~~KR 95 (217)
T KOG0868|consen 16 CSWRVRIALALKGIDYEYKPVNLLKEEDQSDSEFKEINPMEKVPTLVIDGLTLTESLAIIEYLEETYPDPPLLPKDPHKR 95 (217)
T ss_pred chHHHHHHHHHcCCCcceeehhhhcchhhhhhHHhhcCchhhCCeEEECCEEeehHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 6899999999999999999999764 345799999999999999999999999999999999999999887 4456
Q ss_pred HhhhhhhHH-----------HHHhhhcCCCCC---chHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHH
Q 040329 76 ASVGSKIFS-----------MFIGFLKSKDPS---DGSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHL 140 (164)
Q Consensus 76 ~~~~~~~~~-----------~~~~~~~~~~~~---~~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~ 140 (164)
+...+...- .+..+...+... .=....+.+.|..+|+.|.. .|.|.+||++|+||+++.+.++..
T Consensus 96 A~~r~i~~~i~sgIQPlQNl~vl~~l~ek~~~~~~~W~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA 175 (217)
T KOG0868|consen 96 AKARAISLLIASGIQPLQNLSVLKMLNEKEPGYGDQWAQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNA 175 (217)
T ss_pred HHHHHHHHHHHhCCCcchhhHHHHHhcccccchhhHHHHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhh
Confidence 665544321 122233333331 22345678889999999975 679999999999999999999766
Q ss_pred H
Q 040329 141 E 141 (164)
Q Consensus 141 ~ 141 (164)
.
T Consensus 176 ~ 176 (217)
T KOG0868|consen 176 N 176 (217)
T ss_pred h
Confidence 4
No 15
>PRK10357 putative glutathione S-transferase; Provisional
Probab=99.95 E-value=6.9e-27 Score=165.42 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=118.0
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEE-eCCeeecchHHHHHHHHhhCCCCCCCC--ChHHHh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIK-LDEKWLPDSDVITQSLEEKYPDPPLRT--PPEKAS 77 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~-~~~~~i~es~aI~~yL~~~~~~~~~~~--~~~~~~ 77 (164)
|+++++|++|+++||+|+.+.++....++++.+.||.|++|+|+ ++|.+++||.+|++||+++++...+.| +.++++
T Consensus 10 ~~~~~v~~~L~~~gv~ye~~~~~~~~~~~~~~~~nP~g~vP~L~~~~g~~l~eS~aI~~yL~~~~~~~~l~p~~~~~~a~ 89 (202)
T PRK10357 10 PFVRKISILLLEKGITFEFVNELPYNADNGVAQYNPLGKVPALVTEEGECWFDSPIIAEYIELLNVAPAMLPRDPLAALR 89 (202)
T ss_pred chHHHHHHHHHHcCCCCeEEecCCCCCchhhhhcCCccCCCeEEeCCCCeeecHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 78999999999999999999988766667788899999999998 678999999999999999987666665 345666
Q ss_pred hhhhhHHH---H---H---h--hhcCCCCC----chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHH
Q 040329 78 VGSKIFSM---F---I---G--FLKSKDPS----DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEI 142 (164)
Q Consensus 78 ~~~~~~~~---~---~---~--~~~~~~~~----~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~ 142 (164)
+.+|.... + . . ........ +.....+.+.++.+|+.|. +++ ++|+++|+||+++++.+.++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~le~~L~-~~~-l~Gd~~t~ADi~l~~~l~~~~~ 167 (202)
T PRK10357 90 VRQLEALADGIMDAALVSVREQARPAAQQSEDELLRQREKINRSLDALEGYLV-DGT-LKTDTVNLATIAIACAVGYLNF 167 (202)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHHHHHHhhc-cCc-ccCCCcCHHHHHHHHHHHHHHh
Confidence 65553211 0 0 0 11111111 2344578888999999996 466 9999999999999999987643
Q ss_pred hhhccCCCCCCCCchhhhhhcC
Q 040329 143 ALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 143 ~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
... +......+|+|.+|++
T Consensus 168 ~~~---~~~~~~~~p~l~~~~~ 186 (202)
T PRK10357 168 RRV---APGWCVDRPHLVKLVE 186 (202)
T ss_pred ccc---CcchhhcChHHHHHHH
Confidence 111 1112367899999974
No 16
>PRK11752 putative S-transferase; Provisional
Probab=99.95 E-value=7.4e-27 Score=171.40 Aligned_cols=161 Identities=20% Similarity=0.264 Sum_probs=118.9
Q ss_pred ChhHHHHHHHHhc------CCCCceEecCCCC---CchhhhhcCCCCCCceEEeC----CeeecchHHHHHHHHhhCCCC
Q 040329 1 PFCQRVLLTIEEK------HLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLD----EKWLPDSDVITQSLEEKYPDP 67 (164)
Q Consensus 1 P~~~~~r~~L~~~------gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~----~~~i~es~aI~~yL~~~~~~~ 67 (164)
|+|+|++++|+++ |++|+.+.+++.. .+++|+++||.|++|+|+++ |.+|+||.||++||+++++.
T Consensus 53 ~~~~rV~i~L~e~~~~~~~gl~ye~~~v~~~~~~~~~~e~~~iNP~GkVP~Lv~~dg~~~~~L~ES~AIl~YL~~~~~~- 131 (264)
T PRK11752 53 PNGQKVTIMLEELLALGVKGAEYDAWLIRIGEGDQFSSGFVEINPNSKIPALLDRSGNPPIRVFESGAILLYLAEKFGA- 131 (264)
T ss_pred CchHHHHHHHHHHHhccCCCCceEEEEecCccccccCHHHHhhCCCCCCCEEEeCCCCCCeEEEcHHHHHHHHHHhcCC-
Confidence 7899999999997 9999999998754 46789999999999999975 36899999999999999873
Q ss_pred CCCC--ChHHHhhhhhhHHHH----------Hhhh-cCCCCC----chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcch
Q 040329 68 PLRT--PPEKASVGSKIFSMF----------IGFL-KSKDPS----DGSEQALLNELNSFNDYIKENGPFIIGGKVSAAD 130 (164)
Q Consensus 68 ~~~~--~~~~~~~~~~~~~~~----------~~~~-~~~~~~----~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD 130 (164)
+.| +.+++++..|+.... .... ..+... +.....+.+.|..+|++|. +++|++|+++|+||
T Consensus 132 -L~P~~~~era~v~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~le~~L~-~~~fl~Gd~~TlAD 209 (264)
T PRK11752 132 -FLPKDLAARTETLNWLFWQQGSAPFLGGGFGHFYAYAPEKIEYAINRFTMEAKRQLDVLDKQLA-EHEYIAGDEYTIAD 209 (264)
T ss_pred -cCCCCHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhc-cCCCCCCCccCHHH
Confidence 444 467888888764211 0111 112211 2233467788999999996 67899999999999
Q ss_pred hhhhhhhHHHHHhhhc-cCCCCCCCCchhhhhhcC
Q 040329 131 LSLGPKFYHLEIALGH-YKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 131 ~~l~~~l~~~~~~~~~-~~~~~~~~~~p~l~~w~~ 164 (164)
|++++.+.++...... .......+.+|+|.+|++
T Consensus 210 i~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~ 244 (264)
T PRK11752 210 IAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAK 244 (264)
T ss_pred HHHHHHHHHHhhccccccccccCcccCHHHHHHHH
Confidence 9999988766431100 011112478999999974
No 17
>PRK10387 glutaredoxin 2; Provisional
Probab=99.94 E-value=1.3e-26 Score=164.84 Aligned_cols=153 Identities=20% Similarity=0.376 Sum_probs=113.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceE-EeCCeeecchHHHHHHHHhhCCCCCCCCChHHHhhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVI-KLDEKWLPDSDVITQSLEEKYPDPPLRTPPEKASVG 79 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L-~~~~~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~~ 79 (164)
|||+|+|++|+++|++|+.+.++..+... ..+.||.|++|+| .+||.+|+||.+|++||+++|+.+.+. ..+++.+.
T Consensus 10 p~~~kv~~~L~~~gi~y~~~~~~~~~~~~-~~~~~p~~~VPvL~~~~g~~l~eS~aI~~yL~~~~~~~~l~-~~~~~~~~ 87 (210)
T PRK10387 10 PFCVKARMIFGLKNIPVELIVLANDDEAT-PIRMIGQKQVPILQKDDGSYMPESLDIVHYIDELDGKPLLT-GKRSPAIE 87 (210)
T ss_pred chHHHHHHHHHHcCCCeEEEEcCCCchhh-HHHhcCCcccceEEecCCeEecCHHHHHHHHHHhCCCccCC-CcccHHHH
Confidence 89999999999999999998887554332 3578999999999 578999999999999999999865443 33566777
Q ss_pred hhhHHHHH-------hhhcCC---C--------------------------CCchHHHHHHHHHHHHHHhhhhcCCcccC
Q 040329 80 SKIFSMFI-------GFLKSK---D--------------------------PSDGSEQALLNELNSFNDYIKENGPFIIG 123 (164)
Q Consensus 80 ~~~~~~~~-------~~~~~~---~--------------------------~~~~~~~~~~~~l~~le~~L~~~~~~l~G 123 (164)
+|+..... ..+... . ..+...+.+.+.|..+|++|. + +|++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~-~-~~l~G 165 (210)
T PRK10387 88 EWLRKVFGYLNKLLYPRFAKADLPEFATPSARQYFIDKKEASIGDFDALLAHTPGLIKEINADLRALDPLIV-K-PNAVN 165 (210)
T ss_pred HHHHHHHHHhhcchhcccccCCCcccCCHHHHHHHHHhHHhccCCHHHHHhcCHHHHHHHHHHHHHHHHHhc-C-ccccC
Confidence 76542211 100000 0 012334567788999999995 4 99999
Q ss_pred CCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 124 GKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 124 ~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+++|+||+++++.+.++... .+. +.+|+|.+|++
T Consensus 166 ~~~s~ADi~l~~~l~~~~~~----~~~---~~~p~l~~w~~ 199 (210)
T PRK10387 166 GELSTDDIHLFPILRNLTLV----KGI---EWPPRVADYRD 199 (210)
T ss_pred CCCCHHHHHHHHHHhcceee----cCC---CCCHHHHHHHH
Confidence 99999999999999887642 111 33699999974
No 18
>PTZ00057 glutathione s-transferase; Provisional
Probab=99.94 E-value=2.5e-26 Score=163.01 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=107.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhh--------hcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFL--------KISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRTP 72 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~--------~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~~ 72 (164)
+.++++|++|+++|++|+.+.++.. .+ ++. +.||+|++|+|++||.+|+||.||++||+++++.. +.
T Consensus 14 ~~~~~vrl~L~~~gi~ye~~~~~~~-~~-~~~~~~~~~~~~~nP~g~vP~L~~~~~~l~eS~AI~~YLa~~~~~~---~~ 88 (205)
T PTZ00057 14 GKAELIRLIFAYLGIEYTDKRFGEN-GD-AFIEFKNFKKEKDTPFEQVPILEMDNIIFAQSQAIVRYLSKKYKIC---GE 88 (205)
T ss_pred cchHHHHHHHHHcCCCeEEEecccc-ch-HHHHHHhccccCCCCCCCCCEEEECCEEEecHHHHHHHHHHHcCCC---CC
Confidence 4689999999999999999977532 22 332 47999999999999999999999999999999743 23
Q ss_pred hHHHhhhhhhHHH-HHhhh----c----CCCCCchHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHH
Q 040329 73 PEKASVGSKIFSM-FIGFL----K----SKDPSDGSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEI 142 (164)
Q Consensus 73 ~~~~~~~~~~~~~-~~~~~----~----~~~~~~~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~ 142 (164)
.+++++..|+... ...+. . .....+...+.+.+.+..+|+.|++ +++|++|+++|+||+++++.+.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~ 168 (205)
T PTZ00057 89 SELNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIET 168 (205)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHH
Confidence 3344433332211 10110 0 0111123456788889999999974 34899999999999999999877653
Q ss_pred hhhccCCCCCCCCchhhhhhc
Q 040329 143 ALGHYKNWSVPDSLPHVKSYM 163 (164)
Q Consensus 143 ~~~~~~~~~~~~~~p~l~~w~ 163 (164)
..+ ...+.+|+|.+|+
T Consensus 169 ~~~-----~~l~~~P~l~~~~ 184 (205)
T PTZ00057 169 KYP-----NSLKNFPLLKAHN 184 (205)
T ss_pred hCh-----hhhccChhHHHHH
Confidence 211 1236778888775
No 19
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=99.93 E-value=5.4e-25 Score=156.54 Aligned_cols=152 Identities=16% Similarity=0.307 Sum_probs=109.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEE-eCCeeecchHHHHHHHHhhCCCCCCCCChHHHhhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIK-LDEKWLPDSDVITQSLEEKYPDPPLRTPPEKASVG 79 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~-~~~~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~~ 79 (164)
|||+|+|++|+++|++|+.+.++..+.. ...+.||.|++|+|+ +||.+++||.+|++||+++|+.+. .++..++++.
T Consensus 9 p~~~kvr~~L~~~gl~~e~~~~~~~~~~-~~~~~np~g~vP~l~~~~g~~l~es~~I~~yL~~~~~~~~-~~~~~~~~~~ 86 (209)
T TIGR02182 9 PFCVRARMIFGLKNIPVEKHVLLNDDEE-TPIRMIGAKQVPILQKDDGRAMPESLDIVAYFDKLDGEPL-LTGKVSPEIE 86 (209)
T ss_pred ChHHHHHHHHHHcCCCeEEEECCCCcch-hHHHhcCCCCcceEEeeCCeEeccHHHHHHHHHHhCCCcc-CCCCChHHHH
Confidence 8999999999999999999877654433 347889999999998 889999999999999999998643 3333445555
Q ss_pred hhhHH-------HHHhhhcCC-----------------------------CCCchHHHHHHHHHHHHHHhhhhcCCcccC
Q 040329 80 SKIFS-------MFIGFLKSK-----------------------------DPSDGSEQALLNELNSFNDYIKENGPFIIG 123 (164)
Q Consensus 80 ~~~~~-------~~~~~~~~~-----------------------------~~~~~~~~~~~~~l~~le~~L~~~~~~l~G 123 (164)
.|+.. .+...+... ...+...+.+.+.|+.+|++|. +++|++|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~le~~L~-~~~~l~g 165 (209)
T TIGR02182 87 AWLRKVTGYANKLLLPRFAKSDLPEFATQSARKYFTDKKEASAGNFSALLNHTPGLLEEINADLEELDKLID-GPNAVNG 165 (209)
T ss_pred HHHHHHHHHhhhhhccccccCCCcccCCHHHHHHHHHHHHHhcCCHHHHHccCHHHHHHHHHHHHHHHHHHh-CccccCC
Confidence 55421 111111100 0013445667888999999996 7899965
Q ss_pred CCCCcchhhhhhhhHHHHHhhhccCCCCCCCCch-hhhhhcC
Q 040329 124 GKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLP-HVKSYMK 164 (164)
Q Consensus 124 ~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p-~l~~w~~ 164 (164)
++|+||+++++.+.++.... + ..+| +|.+|++
T Consensus 166 -~~TiADi~l~~~l~~~~~~~----~----~~~p~~l~~w~~ 198 (209)
T TIGR02182 166 -ELSEDDILVFPLLRNLTLVA----G----INWPSRVADYLD 198 (209)
T ss_pred -CCCHHHHHHHHHhcCeeeec----C----CCCChHHHHHHH
Confidence 69999999999998765311 1 1256 9999974
No 20
>KOG0867 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=2.4e-24 Score=154.62 Aligned_cols=160 Identities=26% Similarity=0.292 Sum_probs=126.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCC-CCC-CCC--Ch
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYP-DPP-LRT--PP 73 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~-~~~-~~~--~~ 73 (164)
|.|+++.++++++|++|+.+.++.. +.+++|+++||.|++|+|+|+|..++||.||+.||.++|+ ... +++ ..
T Consensus 12 ~~~r~vl~~~~~~~l~~e~~~v~~~~ge~~~pefl~~nP~~kVP~l~d~~~~l~eS~AI~~Yl~~ky~~~~~~l~p~~~~ 91 (226)
T KOG0867|consen 12 PPARAVLIAAKELGLEVELKPVDLVKGEQKSPEFLKLNPLGKVPALEDGGLTLWESHAILRYLAEKYGPLGGILLPKDLK 91 (226)
T ss_pred cchHHHHHHHHHcCCceeEEEeeccccccCCHHHHhcCcCCCCCeEecCCeEEeeHHHHHHHHHHHcCCCCcccCCcCHH
Confidence 5799999999999999999977765 4788899999999999999999999999999999999997 222 443 46
Q ss_pred HHHhhhhhhHHHHHhhhc-----------------CCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhh
Q 040329 74 EKASVGSKIFSMFIGFLK-----------------SKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPK 136 (164)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~ 136 (164)
.++.+++|+......+.. +.....+...++.+.++.+|..|. ++.|+.|+++|+||+.+.+.
T Consensus 92 ~ra~v~~~l~~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~-~~~yl~g~~~tlADl~~~~~ 170 (226)
T KOG0867|consen 92 ERAIVDQWLEFENGVLDPVTFERPILAPLLVGLPLNPTAVKELEAKLRKALDNLERFLK-TQVYLAGDQLTLADLSLAST 170 (226)
T ss_pred HHHHHHHHHHhhhcccccccccceeeecceecccCcchhhHHHHHHHHHHHHHHHHHHc-cCCcccCCcccHHHHHHhhH
Confidence 788888887532111111 112235677889999999999996 58999999999999999999
Q ss_pred hHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 137 FYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+..+... . .......++|++.+|++
T Consensus 171 ~~~~~~~--~-~~~~~~~~~p~v~~W~~ 195 (226)
T KOG0867|consen 171 LSQFQGK--F-ATEKDFEKYPKVARWYE 195 (226)
T ss_pred HHHHhHh--h-hhhhhhhhChHHHHHHH
Confidence 9887411 1 11224588999999974
No 21
>KOG1695 consensus Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.90 E-value=8.8e-23 Score=142.89 Aligned_cols=139 Identities=21% Similarity=0.234 Sum_probs=107.8
Q ss_pred hHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCCChHHHhhhhhh
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRTPPEKASVGSKI 82 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~~~~~ 82 (164)
+..+|++++.+|++||++++...+.-+.++...|+|++|+|..||..|.||.||++||+++++-.+ .++.+.+++++..
T Consensus 15 ae~iR~lf~~a~v~fEd~r~~~~~~w~~~K~~~pfgqlP~l~vDg~~i~QS~AI~RyLArk~gl~G-kt~~E~a~vD~i~ 93 (206)
T KOG1695|consen 15 AEPIRLLFAYAGVSFEDKRITMEDAWEELKDKMPFGQLPVLEVDGKKLVQSRAILRYLARKFGLAG-KTEEEEAWVDMIV 93 (206)
T ss_pred HHHHHHHHHhcCCCcceeeeccccchhhhcccCCCCCCCEEeECCEeeccHHHHHHHHHHHhCcCC-CCHHHHHHHHHHH
Confidence 567899999999999999999887323367779999999999999999999999999999998544 4677888887654
Q ss_pred H------HH-HHhhhcC---CCCCc----hHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHH
Q 040329 83 F------SM-FIGFLKS---KDPSD----GSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEI 142 (164)
Q Consensus 83 ~------~~-~~~~~~~---~~~~~----~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~ 142 (164)
. .. +...+.. ....+ .......+.+..+++.|.+ ++.|++||++|+||+.++..+..+..
T Consensus 94 d~~~D~~~~~~~~~~~~~~~g~~~~~~~~~~~Pa~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~ 168 (206)
T KOG1695|consen 94 DQFKDFRWEIFRQPYTAPEAGKSEEELDKLYLPAKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEE 168 (206)
T ss_pred HhhhhHHHHHHHHhhhhhhhccchhhhhhhhccchHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHH
Confidence 2 22 1222221 11112 2334667789999999973 56799999999999999999988876
No 22
>cd03061 GST_N_CLIC GST_N family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division and apoptosis. They can exist in both water-soluble and membrane-bound states, and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and it adopts a fold similar to GSTs, containing an N-terminal domain with a TRX fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. The CLI
Probab=99.86 E-value=2.4e-21 Score=119.05 Aligned_cols=67 Identities=28% Similarity=0.522 Sum_probs=64.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDP 67 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~ 67 (164)
|||+|+||+|+++||+|+.+.+|+.+++++|+++||.|++|+|+++|.+|+||.+|++||+++++.+
T Consensus 23 pf~~rvrl~L~eKgi~ye~~~vd~~~~p~~~~~~nP~g~vPvL~~~~~~i~eS~~I~eYLde~~~~~ 89 (91)
T cd03061 23 PFCQRLFMVLWLKGVVFNVTTVDMKRKPEDLKDLAPGTQPPFLLYNGEVKTDNNKIEEFLEETLCPP 89 (91)
T ss_pred hhHHHHHHHHHHCCCceEEEEeCCCCCCHHHHHhCCCCCCCEEEECCEEecCHHHHHHHHHHHccCC
Confidence 7999999999999999999999999999999999999999999999999999999999999998754
No 23
>KOG4420 consensus Uncharacterized conserved protein (Ganglioside-induced differentiation associated protein 1, GDAP1) [Function unknown]
Probab=99.83 E-value=2.5e-20 Score=131.69 Aligned_cols=160 Identities=24% Similarity=0.373 Sum_probs=109.4
Q ss_pred hHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCC-CCCCChH---H
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDP-PLRTPPE---K 75 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~-~~~~~~~---~ 75 (164)
|||+|++++|+||+|+...|++.+ .++||..+||.|.+|||++++.+|.++..|+.|+++.+-+. .+.|... .
T Consensus 38 sQkVrlvi~EK~id~~~y~V~l~~geh~epwFmrlNp~gevPVl~~g~~II~d~tqIIdYvErtf~ger~l~pe~~S~~~ 117 (325)
T KOG4420|consen 38 SQKVRLVIAEKGIDCEEYDVSLPQGEHKEPWFMRLNPGGEVPVLIHGDNIISDYTQIIDYVERTFTGERVLMPEVGSLQH 117 (325)
T ss_pred cceeeeehhhcccccceeeccCccccccCchheecCCCCCCceEecCCeecccHHHHHHHHHHhhccccccccccccccc
Confidence 799999999999999999998764 68899999999999999999999999999999999988643 3444221 1
Q ss_pred Hhh------------hhhhH-----H-----------------------HHHhhhcCCCC--C-----------------
Q 040329 76 ASV------------GSKIF-----S-----------------------MFIGFLKSKDP--S----------------- 96 (164)
Q Consensus 76 ~~~------------~~~~~-----~-----------------------~~~~~~~~~~~--~----------------- 96 (164)
.++ +.|-+ . .+........+ +
T Consensus 118 d~~l~~e~~l~~lpm~~~t~g~~lh~eL~~~s~iP~~~~iR~~~~k~~~~v~~l~~~e~pdla~ay~akqkkl~~kl~~h 197 (325)
T KOG4420|consen 118 DRVLQYEELLDALPMDAYTHGCILHPELTTDSMIPKYAEIRRHLAKATTDVMKLDHEEEPDLAEAYLAKQKKLMAKLLEH 197 (325)
T ss_pred HHHHHHHHHHHhcCcchhhccccccchhhccccCcccHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHHHHHhc
Confidence 111 01100 0 00000000100 0
Q ss_pred ------chHHHHHHHHHHHHHHhhhh---cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhc
Q 040329 97 ------DGSEQALLNELNSFNDYIKE---NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYM 163 (164)
Q Consensus 97 ------~~~~~~~~~~l~~le~~L~~---~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~ 163 (164)
..+...+...|..+|+.|.+ ...|+||+.+|+||+++.+.|+++....-.-..| -....|||.+|+
T Consensus 198 dd~s~lkkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e~~yw-~~gsrpnle~Yf 272 (325)
T KOG4420|consen 198 DDVSYLKKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLEKKYW-EDGSRPNLESYF 272 (325)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccHHHhc-ccCCCccHHHHH
Confidence 11223444456667777752 2589999999999999999999997653221222 225789999886
No 24
>PF13417 GST_N_3: Glutathione S-transferase, N-terminal domain; PDB: 3ERG_B 3IBH_A 3ERF_A 3UBL_A 3UBK_A 3IR4_A 3M8N_B 2R4V_A 2PER_A 2R5G_A ....
Probab=99.81 E-value=6.5e-20 Score=109.96 Aligned_cols=67 Identities=48% Similarity=0.798 Sum_probs=64.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDP 67 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~ 67 (164)
|||+|+|++|+++||+|+.+.++..++.+++++.||.|++|+|++||.+++||.+|++||+++++++
T Consensus 8 p~~~kv~~~l~~~~i~~~~~~v~~~~~~~~~~~~~p~~~vPvL~~~g~~l~dS~~I~~yL~~~~~~~ 74 (75)
T PF13417_consen 8 PYSQKVRLALEEKGIPYELVPVDPEEKRPEFLKLNPKGKVPVLVDDGEVLTDSAAIIEYLEERYPGP 74 (75)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEBTTSTSHHHHHHSTTSBSSEEEETTEEEESHHHHHHHHHHHSTSS
T ss_pred hHHHHHHHHHHHcCCeEEEeccCcccchhHHHhhcccccceEEEECCEEEeCHHHHHHHHHHHcCCC
Confidence 7999999999999999999999988888899999999999999999999999999999999999864
No 25
>PLN02907 glutamate-tRNA ligase
Probab=99.80 E-value=6.6e-19 Score=143.44 Aligned_cols=138 Identities=12% Similarity=0.179 Sum_probs=105.9
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEe-CCeeecchHHHHHHHHhhCCCCCCCC--ChHHHhh
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKL-DEKWLPDSDVITQSLEEKYPDPPLRT--PPEKASV 78 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~-~~~~i~es~aI~~yL~~~~~~~~~~~--~~~~~~~ 78 (164)
.+.++.++|++.|++|+.+. .+|.|++|+|++ ||.+++||.||++||++.++...+.+ +.+++++
T Consensus 12 ~~~~v~~~L~~lgv~~e~~~------------~~p~GkVPvLv~ddG~~L~ES~AIl~YLa~~~p~~~L~p~d~~erAqV 79 (722)
T PLN02907 12 PPLAVIAAAKVAGVPLTIDP------------SLKSGSAPTLLFSSGEKLTGTNVLLRYIARSASLPGFYGQDAFESSQV 79 (722)
T ss_pred ChHHHHHHHHHcCCCcEEee------------cCCCCCCcEEEECCCCEEECHHHHHHHHHHhCCCcCCCCCCHHHHHHH
Confidence 36789999999999998864 258999999984 78999999999999999998766665 4578888
Q ss_pred hhhhHHHHHhhhcCCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchh
Q 040329 79 GSKIFSMFIGFLKSKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPH 158 (164)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~ 158 (164)
.+|+..... +. ....+.+.++.+|++|+ +++||+|+++|+||+++++.+...... +........+|+
T Consensus 80 ~qWL~~~~~-~~--------~~~~l~~~L~~LE~~L~-~rtYLvGd~lTLADIaL~~~L~~~~~~---~~~~~~~~~yPn 146 (722)
T PLN02907 80 DEWLDYAPT-FS--------SGSEFENACEYVDGYLA-SRTFLVGYSLTIADIAIWSGLAGSGQR---WESLRKSKKYQN 146 (722)
T ss_pred HHHHHHHhh-cc--------cHHHHHHHHHHHHHHhc-cCCeecCCCCCHHHHHHHHHHHhhhhh---hhcccccccCHH
Confidence 888854321 10 01246678999999996 689999999999999999988654211 111113478999
Q ss_pred hhhhcC
Q 040329 159 VKSYMK 164 (164)
Q Consensus 159 l~~w~~ 164 (164)
|.+|++
T Consensus 147 L~RW~e 152 (722)
T PLN02907 147 LVRWFN 152 (722)
T ss_pred HHHHHH
Confidence 999974
No 26
>cd03052 GST_N_GDAP1 GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal TRX-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=99.77 E-value=1.5e-18 Score=103.38 Aligned_cols=61 Identities=33% Similarity=0.504 Sum_probs=56.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+|+|+|++|+++|++|+.+.++.. ..+++++++||.|++|+|++||.+++||.+|++||+
T Consensus 10 ~~s~rv~~~L~e~gl~~e~~~v~~~~~~~~~~~~~~inP~g~vP~L~~~g~~l~Es~aI~~yLe 73 (73)
T cd03052 10 FSSQKVRLVIAEKGLRCEEYDVSLPLSEHNEPWFMRLNPTGEVPVLIHGDNIICDPTQIIDYLE 73 (73)
T ss_pred ccHHHHHHHHHHcCCCCEEEEecCCcCccCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 6899999999999999999998874 356789999999999999999999999999999984
No 27
>cd03059 GST_N_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal TRX-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.76 E-value=2.6e-18 Score=102.35 Aligned_cols=64 Identities=28% Similarity=0.469 Sum_probs=60.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKY 64 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~ 64 (164)
|+|++++++|+++|++|+.+.++..+..+++++.||.|++|+|+++|..++||.+|++||++++
T Consensus 10 ~~~~~v~~~l~~~gi~~~~~~v~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~~~ 73 (73)
T cd03059 10 VYSHRVRIVLAEKGVSVEIIDVDPDNPPEDLAELNPYGTVPTLVDRDLVLYESRIIMEYLDERF 73 (73)
T ss_pred hhHHHHHHHHHHcCCccEEEEcCCCCCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 7899999999999999999999988888889999999999999999999999999999999875
No 28
>cd03048 GST_N_Ure2p_like GST_N family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The N-terminal TRX-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. Characterized GSTs in this subfamily include Aspergillus fumigatus GSTs 1 and 2, and
Probab=99.75 E-value=7.3e-18 Score=102.47 Aligned_cols=66 Identities=36% Similarity=0.538 Sum_probs=60.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeC---CeeecchHHHHHHHHhhCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLD---EKWLPDSDVITQSLEEKYPD 66 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~---~~~i~es~aI~~yL~~~~~~ 66 (164)
|+|+++|++|+++|++|+.+.++.. ..++++++.||.|++|+|+++ |..|+||.+|++||++++++
T Consensus 10 ~~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~g~~l~eS~aI~~yL~~~~~~ 81 (81)
T cd03048 10 PNGFKVSIMLEELGLPYEIHPVDISKGEQKKPEFLKINPNGRIPAIVDHNGTPLTVFESGAILLYLAEKYDK 81 (81)
T ss_pred CChHHHHHHHHHcCCCcEEEEecCcCCcccCHHHHHhCcCCCCCEEEeCCCCceEEEcHHHHHHHHHHHhCC
Confidence 7999999999999999999999864 356789999999999999987 79999999999999999863
No 29
>cd03058 GST_N_Tau GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropionate herbicides. In addition, Tau GSTs play important roles in intracellular signalling, biosynthesis of anthocyanin,
Probab=99.74 E-value=8.5e-18 Score=100.46 Aligned_cols=64 Identities=34% Similarity=0.565 Sum_probs=59.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCC-CCCceEEeCCeeecchHHHHHHHHhhC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPE-GKVPVIKLDEKWLPDSDVITQSLEEKY 64 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~-~~~P~L~~~~~~i~es~aI~~yL~~~~ 64 (164)
|+|+|+|++|+++|++|+.+.++...+++++++.||. |++|+|+++|.+++||.+|++||++++
T Consensus 10 p~~~~v~~~l~~~gl~~~~~~~~~~~~~~~~~~~~p~~~~vP~l~~~~~~l~eS~aI~~yL~~~~ 74 (74)
T cd03058 10 PFVLRVRIALALKGVPYEYVEEDLGNKSELLLASNPVHKKIPVLLHNGKPICESLIIVEYIDEAW 74 (74)
T ss_pred chHHHHHHHHHHcCCCCEEEEeCcccCCHHHHHhCCCCCCCCEEEECCEEeehHHHHHHHHHhhC
Confidence 7999999999999999999999887777889999995 999999999999999999999999864
No 30
>cd03060 GST_N_Omega_like GST_N family, Omega-like subfamily; composed of uncharacterized proteins with similarity to class Omega GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. Like Omega enzymes, proteins in this subfamily contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a r
Probab=99.74 E-value=9.4e-18 Score=99.48 Aligned_cols=60 Identities=28% Similarity=0.441 Sum_probs=56.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeC-CeeecchHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLD-EKWLPDSDVITQSL 60 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~-~~~i~es~aI~~yL 60 (164)
|||+|++++|+++|++|+.+.++..+++++++++||.|++|+|+++ |..++||.+|++|+
T Consensus 10 p~~~rv~~~L~~~gl~~e~~~v~~~~~~~~~~~~np~~~vP~L~~~~g~~l~eS~aI~~y~ 70 (71)
T cd03060 10 PYAMRARMALLLAGITVELREVELKNKPAEMLAASPKGTVPVLVLGNGTVIEESLDIMRWA 70 (71)
T ss_pred cHHHHHHHHHHHcCCCcEEEEeCCCCCCHHHHHHCCCCCCCEEEECCCcEEecHHHHHHhh
Confidence 7999999999999999999999988777889999999999999985 89999999999997
No 31
>cd03076 GST_N_Pi GST_N family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an increase in JNK activity, thereby promoting apoptosis. GSTP1 is expressed in various tumors and is the predominant GST in a w
Probab=99.73 E-value=8.9e-18 Score=100.12 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=57.4
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEE 62 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~ 62 (164)
|+|+++|++|+++|++|+.+.++..++.+++++.||.|++|+|+++|.+++||.||++||++
T Consensus 11 ~~~~~v~~~L~~~~i~~e~~~v~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 72 (73)
T cd03076 11 GRAEAIRLLLADQGISWEEERVTYEEWQESLKPKMLFGQLPCFKDGDLTLVQSNAILRHLGR 72 (73)
T ss_pred chHHHHHHHHHHcCCCCEEEEecHHHhhhhhhccCCCCCCCEEEECCEEEEcHHHHHHHHhc
Confidence 57999999999999999999998766666799999999999999999999999999999976
No 32
>cd03050 GST_N_Theta GST_N family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenation of dihalomethanes. This is an essential process in methylotrophic bacteria to enable them to use chloromethane and DC
Probab=99.73 E-value=2.3e-17 Score=99.05 Aligned_cols=64 Identities=28% Similarity=0.380 Sum_probs=58.0
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKY 64 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~ 64 (164)
|+|++++++|+++|++|+.+.++..+ ..+++.+.||.|++|+|+++|.+++||.||++||++++
T Consensus 10 ~~~~~v~~~l~~~g~~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~eS~aI~~Yl~~~~ 76 (76)
T cd03050 10 QPSRAVYIFLKLNKIPFEECPIDLRKGEQLTPEFKKINPFGKVPAIVDGDFTLAESVAILRYLARKF 76 (76)
T ss_pred hhHHHHHHHHHHcCCCcEEEEecCCCCCcCCHHHHHhCcCCCCCEEEECCEEEEcHHHHHHHHHhhC
Confidence 57899999999999999999998754 34679999999999999999999999999999999875
No 33
>cd03053 GST_N_Phi GST_N family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Phi GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes are highly reactive toward chloroacetanilide and thiocarbamate herbicides. Some Phi GSTs have other functions including t
Probab=99.72 E-value=2.1e-17 Score=99.24 Aligned_cols=63 Identities=37% Similarity=0.494 Sum_probs=57.4
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEK 63 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~ 63 (164)
|+|+++|++|+++|++|+.+.++.. ..++++++.||.|++|+|+++|..++||.||++||+++
T Consensus 11 ~~s~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~P~~~vP~l~~~g~~l~es~aI~~yL~~~ 76 (76)
T cd03053 11 TCVRRVLLCLEEKGVDYELVPVDLTKGEHKSPEHLARNPFGQIPALEDGDLKLFESRAITRYLAEK 76 (76)
T ss_pred hhHHHHHHHHHHcCCCcEEEEeCccccccCCHHHHhhCCCCCCCEEEECCEEEEcHHHHHHHHhhC
Confidence 6899999999999999999988875 34578999999999999999999999999999999863
No 34
>cd03043 GST_N_1 GST_N family, unknown subfamily 1; composed of uncharacterized proteins, predominantly from bacteria, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.72 E-value=1.9e-17 Score=98.70 Aligned_cols=61 Identities=30% Similarity=0.375 Sum_probs=56.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC--CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN--KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~--~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+|+++|++|+++|++|+.+.++..+ ..+++++.||.|++|+|+++|.+++||.+|++||+
T Consensus 11 ~~s~~v~~~L~~~gl~~e~~~v~~~~~~~~~~~~~~nP~g~vP~L~~~g~~l~eS~aI~~YL~ 73 (73)
T cd03043 11 SWSLRPWLLLKAAGIPFEEILVPLYTPDTRARILEFSPTGKVPVLVDGGIVVWDSLAICEYLA 73 (73)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCccccHHHHhhCCCCcCCEEEECCEEEEcHHHHHHHhC
Confidence 68999999999999999999998754 45779999999999999999999999999999984
No 35
>PF13409 GST_N_2: Glutathione S-transferase, N-terminal domain; PDB: 3C8E_B 3M1G_A 3R3E_A 3O3T_A 1RK4_A 1K0O_B 1K0N_A 3QR6_A 3SWL_A 3TGZ_B ....
Probab=99.72 E-value=1.2e-17 Score=98.64 Aligned_cols=63 Identities=46% Similarity=0.755 Sum_probs=55.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCC----CCCchhhhhcCCCCCCceEEe-CCeeecchHHHHHHHHhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDL----GNKPEWFLKISPEGKVPVIKL-DEKWLPDSDVITQSLEEK 63 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~----~~~~~~~~~~~p~~~~P~L~~-~~~~i~es~aI~~yL~~~ 63 (164)
|||+|++++|+++|++|+...++. ...++++.+.||.|++|+|++ +|.+++||.+|++||+++
T Consensus 3 P~a~Rv~i~l~~~gl~~~~~~v~~~~~~~~~~~~~~~~~p~~~VP~L~~~~g~vi~eS~~I~~yL~~~ 70 (70)
T PF13409_consen 3 PFAHRVRIALEEKGLPYEIKVVPLIPKGEQKPPEFLALNPRGKVPVLVDPDGTVINESLAILEYLEEQ 70 (70)
T ss_dssp HHHHHHHHHHHHHTGTCEEEEEETTTTBCTTCHBHHHHSTT-SSSEEEETTTEEEESHHHHHHHHHHT
T ss_pred hHhHHHHHHHHHhCCCCEEEEEeeecCccccChhhhccCcCeEEEEEEECCCCEeeCHHHHHHHHhcC
Confidence 899999999999999999988843 234578999999999999997 789999999999999864
No 36
>cd03046 GST_N_GTT1_like GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pomb
Probab=99.72 E-value=3e-17 Score=98.48 Aligned_cols=65 Identities=40% Similarity=0.579 Sum_probs=59.4
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~ 65 (164)
++++++|++|+++|++|+.+.++.. ...+++++.||.+++|+|+++|.+++||.+|++||+++++
T Consensus 9 ~~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~g~~l~es~aI~~yL~~~~~ 76 (76)
T cd03046 9 SRSFRILWLLEELGLPYELVLYDRGPGEQAPPEYLAINPLGKVPVLVDGDLVLTESAAIILYLAEKYG 76 (76)
T ss_pred CChHHHHHHHHHcCCCcEEEEeCCCCCccCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHHHHhCc
Confidence 4789999999999999999999874 4567899999999999999999999999999999999874
No 37
>cd03045 GST_N_Delta_Epsilon GST_N family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites that are easily excreted. They are also implicated in protection against cellular damage by oxidative stress.
Probab=99.72 E-value=2.9e-17 Score=98.09 Aligned_cols=62 Identities=34% Similarity=0.398 Sum_probs=56.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEE 62 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~ 62 (164)
|+|+++|++|+++|++|+.+.++..+ ..+++++.||.|++|+|+++|.+++||.||++||++
T Consensus 10 ~~~~~v~~~l~~~gi~~e~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~~ 74 (74)
T cd03045 10 PPCRAVLLTAKALGLELNLKEVNLMKGEHLKPEFLKLNPQHTVPTLVDNGFVLWESHAILIYLVE 74 (74)
T ss_pred CcHHHHHHHHHHcCCCCEEEEecCccCCcCCHHHHhhCcCCCCCEEEECCEEEEcHHHHHHHHhC
Confidence 68999999999999999999998643 457899999999999999999999999999999974
No 38
>cd03041 GST_N_2GST_N GST_N family, 2 repeats of the N-terminal domain of soluble GSTs (2 GST_N) subfamily; composed of uncharacterized proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.70 E-value=4.3e-17 Score=98.16 Aligned_cols=64 Identities=25% Similarity=0.288 Sum_probs=56.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEe--CCeeecchHHHHHHHHhhC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKL--DEKWLPDSDVITQSLEEKY 64 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~--~~~~i~es~aI~~yL~~~~ 64 (164)
|||+|++++|.++|++|+.+.++... ..+++++.||.|++|+|++ +|.+++||.+|++||+++|
T Consensus 11 p~~~kv~~~L~~~gi~y~~~~v~~~~~~~~~~~~~~p~~~vP~l~~~~~~~~l~es~~I~~yL~~~~ 77 (77)
T cd03041 11 PFCRLVREVLTELELDVILYPCPKGSPKRDKFLEKGGKVQVPYLVDPNTGVQMFESADIVKYLFKTY 77 (77)
T ss_pred chHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHhCCCCcccEEEeCCCCeEEEcHHHHHHHHHHhC
Confidence 79999999999999999999886543 3567999999999999987 4689999999999999875
No 39
>cd03044 GST_N_EF1Bgamma GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal TRX-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role in prot
Probab=99.70 E-value=5.4e-17 Score=97.22 Aligned_cols=62 Identities=29% Similarity=0.335 Sum_probs=56.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC--CCchhhhhcCCCCCCceEEe-CCeeecchHHHHHHHHh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG--NKPEWFLKISPEGKVPVIKL-DEKWLPDSDVITQSLEE 62 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~--~~~~~~~~~~p~~~~P~L~~-~~~~i~es~aI~~yL~~ 62 (164)
|+|+++|++|+++|++|+.+.++.. +..++++++||.|++|+|++ +|.+++||.||++||++
T Consensus 10 ~~~~~~~~~l~~~gi~~~~~~v~~~~~~~~~~~~~~nP~~~vP~L~~~~g~~l~es~aI~~yL~~ 74 (75)
T cd03044 10 PRSLKILAAAKYNGLDVEIVDFQPGKENKTPEFLKKFPLGKVPAFEGADGFCLFESNAIAYYVAN 74 (75)
T ss_pred ccHHHHHHHHHHcCCceEEEecccccccCCHHHHHhCCCCCCCEEEcCCCCEEeeHHHHHHHHhh
Confidence 6899999999999999999999875 46778999999999999997 58899999999999975
No 40
>cd03057 GST_N_Beta GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site forms a covalent bond with GSH.
Probab=99.70 E-value=9.2e-17 Score=96.66 Aligned_cols=64 Identities=34% Similarity=0.527 Sum_probs=58.0
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeC-CeeecchHHHHHHHHhhCC
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLD-EKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~-~~~i~es~aI~~yL~~~~~ 65 (164)
+++++|++|+++|++|+.+.++..+ ..++++++||.|++|+|+++ |..++||.+|++||+++++
T Consensus 10 ~~~~v~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~np~~~vP~l~~~~g~~l~eS~aI~~yL~~~~p 77 (77)
T cd03057 10 CSLAPHIALEELGLPFELVRVDLRTKTQKGADYLAINPKGQVPALVLDDGEVLTESAAILQYLADLHP 77 (77)
T ss_pred chHHHHHHHHHcCCCceEEEEecccCccCCHhHHHhCCCCCCCEEEECCCcEEEcHHHHHHHHHHhCc
Confidence 5789999999999999999988754 46789999999999999987 8999999999999999875
No 41
>cd03038 GST_N_etherase_LigE GST_N family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF.
Probab=99.69 E-value=8.3e-17 Score=98.48 Aligned_cols=64 Identities=30% Similarity=0.341 Sum_probs=56.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCc---hhhhhcCCCCCCceEEeC-CeeecchHHHHHHHHhhCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKP---EWFLKISPEGKVPVIKLD-EKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~---~~~~~~~p~~~~P~L~~~-~~~i~es~aI~~yL~~~~~ 65 (164)
|||+|+|++|+++|++|+.+.++..+.. .++ +.||.|++|+|+++ |.+++||.+|++||+++++
T Consensus 17 p~~~kv~~~L~~~~i~~~~~~~~~~~~~~~~~~~-~~~p~~~vP~L~~~~~~~l~eS~aI~~yL~~~~p 84 (84)
T cd03038 17 PNVWKTRLALNHKGLEYKTVPVEFPDIPPILGEL-TSGGFYTVPVIVDGSGEVIGDSFAIAEYLEEAYP 84 (84)
T ss_pred ChhHHHHHHHHhCCCCCeEEEecCCCcccccccc-cCCCCceeCeEEECCCCEEeCHHHHHHHHHHhCc
Confidence 7999999999999999999998866432 234 78999999999998 8999999999999999875
No 42
>cd03039 GST_N_Sigma_like GST_N family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition of platelet aggregation, bronchoconstriction, vasodilation and mediation of allergy and inflammation. Other class Sigma
Probab=99.69 E-value=6.1e-17 Score=96.23 Aligned_cols=62 Identities=21% Similarity=0.288 Sum_probs=55.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCc-hhhhhcCCCCCCceEEeCCeeecchHHHHHHHHh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKP-EWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEE 62 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~-~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~ 62 (164)
|+|+++|++|+++|++|+.+.++..+.. .++.+.||.|++|+|+++|.+++||.||++||++
T Consensus 10 ~~~~~v~~~l~~~gi~~e~~~~~~~~~~~~~~~~~~p~~~vP~L~~~~~~l~es~aI~~yL~~ 72 (72)
T cd03039 10 GRGEPIRLLLADAGVEYEDVRITYEEWPELDLKPTLPFGQLPVLEIDGKKLTQSNAILRYLAR 72 (72)
T ss_pred chHHHHHHHHHHCCCCcEEEEeCHHHhhhhhhccCCcCCCCCEEEECCEEEEecHHHHHHhhC
Confidence 5789999999999999999998875432 3488899999999999999999999999999974
No 43
>cd03047 GST_N_2 GST_N family, unknown subfamily 2; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The sequence from Burkholderia cepacia was identified as part of a gene cluster involved in the degradation of 2,4,5-trichlorophenoxyacetic acid. Some GSTs (e.g. Class Zeta and Delta) are known to catalyze dechlorination reactions.
Probab=99.69 E-value=1.1e-16 Score=95.30 Aligned_cols=61 Identities=30% Similarity=0.374 Sum_probs=55.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+++++|++|+++|++|+.+.++.. ...+++++.||.|++|+|+++|..|+||.||++||+
T Consensus 10 ~~~~~v~~~L~~~~l~~~~~~~~~~~~~~~~~~~~~~nP~~~vP~L~~~~~~l~eS~aI~~YL~ 73 (73)
T cd03047 10 INVQKVLWLLDELGLPYERIDAGGQFGGLDTPEFLAMNPNGRVPVLEDGDFVLWESNAILRYLA 73 (73)
T ss_pred cchHHHHHHHHHcCCCCEEEEeccccccccCHHHHhhCCCCCCCEEEECCEEEECHHHHHHHhC
Confidence 6889999999999999999988753 245779999999999999999999999999999984
No 44
>cd03056 GST_N_4 GST_N family, unknown subfamily 4; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.68 E-value=1.5e-16 Score=94.58 Aligned_cols=61 Identities=33% Similarity=0.551 Sum_probs=55.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+|+++|++|+++|++|+.+.++... ..+++++.||.|++|+|+++|.+++||.+|++||+
T Consensus 10 ~~~~~v~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~i~es~aI~~yl~ 73 (73)
T cd03056 10 GNCYKVRLLLALLGIPYEWVEVDILKGETRTPEFLALNPNGEVPVLELDGRVLAESNAILVYLA 73 (73)
T ss_pred ccHHHHHHHHHHcCCCcEEEEecCCCcccCCHHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 68999999999999999999998642 56789999999999999999999999999999984
No 45
>PF02798 GST_N: Glutathione S-transferase, N-terminal domain; InterPro: IPR004045 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of Cephalopoda is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Soluble GSTs activate glutathione (GSH) to GS-. In many GSTs, this is accomplished by a Tyr at H-bonding distance from the sulphur of GSH. These enzymes catalyse nucleophilic attack by reduced glutathione (GSH) on nonpolar compounds that contain an electrophillic carbon, nitrogen, or sulphur atom []. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold, with each monomer composed of two distinct domains []. The N-terminal domain forms a thioredoxin-like fold that binds the glutathione moiety, while the C-terminal domain contains several hydrophobic alpha-helices that specifically bind hydrophobic substrates. This entry represents the N-terminal domain of GST.; GO: 0005515 protein binding; PDB: 2VCT_H 2WJU_B 4ACS_A 1BYE_D 1AXD_B 2VCV_P 1TDI_A 1JLV_D 1Y6E_A 1U88_B ....
Probab=99.68 E-value=1.4e-16 Score=95.68 Aligned_cols=61 Identities=33% Similarity=0.451 Sum_probs=54.0
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCC-CCCceEEeC-CeeecchHHHHHHHHh
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPE-GKVPVIKLD-EKWLPDSDVITQSLEE 62 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~-~~~P~L~~~-~~~i~es~aI~~yL~~ 62 (164)
.+.++|++|+++|++|+.+.++... +.+++++.||. |++|+|+++ |..++||.||++||++
T Consensus 11 ~~~~~r~~l~~~gv~~e~~~v~~~~~~~~~~e~~~~~p~~g~vP~l~~~~~~~l~es~AI~~YLa~ 76 (76)
T PF02798_consen 11 RSERIRLLLAEKGVEYEDVRVDFEKGEHKSPEFLAINPMFGKVPALEDGDGFVLTESNAILRYLAR 76 (76)
T ss_dssp TTHHHHHHHHHTT--EEEEEEETTTTGGGSHHHHHHTTTSSSSSEEEETTTEEEESHHHHHHHHHH
T ss_pred chHHHHHHHHHhcccCceEEEecccccccchhhhhcccccceeeEEEECCCCEEEcHHHHHHHhCC
Confidence 5789999999999999999999754 34889999999 999999999 9999999999999985
No 46
>cd03049 GST_N_3 GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.67 E-value=1.6e-16 Score=94.60 Aligned_cols=61 Identities=31% Similarity=0.462 Sum_probs=56.4
Q ss_pred ChhHHHHHHHHh--cCCCCceEecCCCCCchhhhhcCCCCCCceEEe-CCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEE--KHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKL-DEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~--~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~-~~~~i~es~aI~~yL~ 61 (164)
|+|+|+|++|++ +|++|+.+.++..++.+++++.||.|++|+|++ ||..++||.||++||+
T Consensus 10 ~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~g~~l~es~aI~~yLe 73 (73)
T cd03049 10 PYVRKVRVAAHETGLGDDVELVLVNPWSDDESLLAVNPLGKIPALVLDDGEALFDSRVICEYLD 73 (73)
T ss_pred cHHHHHHHHHHHhCCCCCcEEEEcCcccCChHHHHhCCCCCCCEEEECCCCEEECHHHHHhhhC
Confidence 789999999999 899999999998777788999999999999984 7899999999999984
No 47
>cd03080 GST_N_Metaxin_like GST_N family, Metaxin subfamily, Metaxin-like proteins; a heterogenous group of proteins, predominantly uncharacterized, with similarity to metaxins and GSTs. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. One characterized member of this subgroup is a novel GST from Rhodococcus with toluene o-monooxygenase and gamma-glutamylcysteine synthetase activities. Also members are the cadmium-inducible lysosomal protein CDR-1 and its homologs from C. elegans, and the failed axon connections (fax) protein from Drosophila. CDR-1 is an integral membrane protein that functions to protect against cadmium toxicity and may also have a role in osmoregulation to maintain salt balance in C. ele
Probab=99.67 E-value=1.9e-16 Score=94.79 Aligned_cols=58 Identities=41% Similarity=0.723 Sum_probs=53.4
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~ 65 (164)
|||+|++++|+++|++|+.+.++. ++.||.|++|+|+++|.+++||.+|++||+++|+
T Consensus 18 p~~~~v~~~L~~~gi~~~~~~~~~-------~~~~p~g~vPvl~~~g~~l~eS~~I~~yL~~~~~ 75 (75)
T cd03080 18 PFCLKVETFLRMAGIPYENKFGGL-------AKRSPKGKLPFIELNGEKIADSELIIDHLEEKYG 75 (75)
T ss_pred HHHHHHHHHHHHCCCCcEEeecCc-------ccCCCCCCCCEEEECCEEEcCHHHHHHHHHHHcC
Confidence 789999999999999999988774 3679999999999999999999999999999875
No 48
>KOG4244 consensus Failed axon connections (fax) protein/glutathione S-transferase-like protein [Signal transduction mechanisms]
Probab=99.67 E-value=5.2e-16 Score=110.37 Aligned_cols=153 Identities=20% Similarity=0.431 Sum_probs=110.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCCCCCChHHHhhhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPPLRTPPEKASVGS 80 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~~~ 80 (164)
|||+|+...|+..+||||.+...+ +..++.|++|.++.||.-|.+|.-|...|.++++-+..+++.++++...
T Consensus 62 PfClKvEt~lR~~~IpYE~~~~~~-------~~rSr~G~lPFIELNGe~iaDS~~I~~~L~~hf~~~~~L~~e~~a~s~A 134 (281)
T KOG4244|consen 62 PFCLKVETFLRAYDIPYEIVDCSL-------KRRSRNGTLPFIELNGEHIADSDLIEDRLRKHFKIPDDLSAEQRAQSRA 134 (281)
T ss_pred hHHHHHHHHHHHhCCCceeccccc-------eeeccCCCcceEEeCCeeccccHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 899999999999999999886653 2445679999999999999999999999999998665466666665221
Q ss_pred ----------------------hhH-------------HHHHhhh---------c-------CCCCCchHHHHHHHHHHH
Q 040329 81 ----------------------KIF-------------SMFIGFL---------K-------SKDPSDGSEQALLNELNS 109 (164)
Q Consensus 81 ----------------------~~~-------------~~~~~~~---------~-------~~~~~~~~~~~~~~~l~~ 109 (164)
|+. ..+..++ . +.-..++..+-+.+-++.
T Consensus 135 l~rm~dnhL~~~l~y~k~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~IG~f~~~Ei~ell~rDlr~ 214 (281)
T KOG4244|consen 135 LSRMADNHLFWILLYYKGADDAWLNTDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGAIGDFESAEIDELLHRDLRA 214 (281)
T ss_pred HHHHHHHHHHHHHHHhhhcchHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHhhccccCcCHHHHHHHHHHHHHH
Confidence 110 0000011 0 001223466677888999
Q ss_pred HHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC--C-CCCCchhhhhhcC
Q 040329 110 FNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW--S-VPDSLPHVKSYMK 164 (164)
Q Consensus 110 le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~--~-~~~~~p~l~~w~~ 164 (164)
+++.|+ +++||.||++|-+|+++++.|.++-. + ++.. + +.+++|||.+|++
T Consensus 215 i~~~Lg-~KkflfGdkit~~DatvFgqLa~v~Y-P--~~~~i~d~le~d~p~l~eYce 268 (281)
T KOG4244|consen 215 ISDYLG-DKKFLFGDKITPADATVFGQLAQVYY-P--FRSHISDLLEGDFPNLLEYCE 268 (281)
T ss_pred HHHHhC-CCccccCCCCCcceeeehhhhhheec-c--CCCcHHHHHhhhchHHHHHHH
Confidence 999995 78999999999999999999987753 1 1110 1 1277999999874
No 49
>cd03042 GST_N_Zeta GST_N family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates but display modest GSH peroxidase activity. They are also implicated in the detoxification of the carcinogen dichloroacetic acid by catalyzing its dechlorination to glyoxylic acid.
Probab=99.67 E-value=2.4e-16 Score=93.73 Aligned_cols=61 Identities=26% Similarity=0.359 Sum_probs=55.9
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC---CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG---NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~---~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+|+++|++|+++|++|+.+.++.. .+.+++++.||.|++|+|+++|..++||.||++||+
T Consensus 10 ~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~l~es~aI~~yL~ 73 (73)
T cd03042 10 SASYRVRIALNLKGLDYEYVPVNLLKGEQLSPAYRALNPQGLVPTLVIDGLVLTQSLAIIEYLD 73 (73)
T ss_pred cchHHHHHHHHHcCCCCeEEEecCccCCcCChHHHHhCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 6899999999999999999999874 356789999999999999999999999999999984
No 50
>cd03075 GST_N_Mu GST_N family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the most abundant GSTs in human liver, skeletal muscle and brain, and are believed to provide protection against diseases inc
Probab=99.67 E-value=2.8e-16 Score=95.66 Aligned_cols=64 Identities=20% Similarity=0.194 Sum_probs=53.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCC----chhhhh-----cCCCCCCceEEeCCeeecchHHHHHHHHhhC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNK----PEWFLK-----ISPEGKVPVIKLDEKWLPDSDVITQSLEEKY 64 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~----~~~~~~-----~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~ 64 (164)
+.|+++|++|+++|++|+.+.+++.+. .+++.+ .+|+|++|+|++||.+++||.||++||++++
T Consensus 10 ~~~~~~~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~~~~~~~~~P~g~vP~L~~~g~~l~ES~AIl~YLa~~~ 82 (82)
T cd03075 10 GLAQPIRLLLEYTGEKYEEKRYELGDAPDYDRSQWLNEKFKLGLDFPNLPYYIDGDVKLTQSNAILRYIARKH 82 (82)
T ss_pred cccHHHHHHHHHcCCCcEEEEeccCCccccchHhhhccchhcCCcCCCCCEEEECCEEEeehHHHHHHHhhcC
Confidence 468999999999999999999997642 233432 2399999999999999999999999999864
No 51
>cd03055 GST_N_Omega GST_N family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a redox active residue capable of reducing GSH mixed disulfides in a monothiol mechanism. Polymorphisms of the class Omega
Probab=99.67 E-value=2.4e-16 Score=97.46 Aligned_cols=61 Identities=36% Similarity=0.767 Sum_probs=57.0
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeC-CeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLD-EKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~-~~~i~es~aI~~yL~ 61 (164)
|||++++++|+++|++|+.+.++.....+++++.||.+++|+|+++ |..++||.+|++||+
T Consensus 28 p~~~kv~~~L~~~gl~~~~~~v~~~~~~~~~~~~np~~~vPvL~~~~g~~l~eS~aI~~yLe 89 (89)
T cd03055 28 PYAQRARLVLAAKNIPHEVININLKDKPDWFLEKNPQGKVPALEIDEGKVVYESLIICEYLD 89 (89)
T ss_pred chHHHHHHHHHHcCCCCeEEEeCCCCCcHHHHhhCCCCCcCEEEECCCCEEECHHHHHHhhC
Confidence 7999999999999999999999987777779999999999999986 899999999999985
No 52
>cd03037 GST_N_GRX2 GST_N family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD, compared with other GRXs which are 9-12kD in size. GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=99.65 E-value=4.1e-16 Score=92.39 Aligned_cols=61 Identities=18% Similarity=0.412 Sum_probs=53.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeC-CeeecchHHHHHHHHh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLD-EKWLPDSDVITQSLEE 62 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~-~~~i~es~aI~~yL~~ 62 (164)
|||+|+|++|+++|++|+.+.++..... ...+.+|.+++|+|+++ |..++||.+|++||++
T Consensus 10 p~~~rvr~~L~~~gl~~~~~~~~~~~~~-~~~~~~~~~~vP~L~~~~~~~l~es~aI~~yL~~ 71 (71)
T cd03037 10 PFCVKARMIAGLKNIPVEQIILQNDDEA-TPIRMIGAKQVPILEKDDGSFMAESLDIVAFIDE 71 (71)
T ss_pred cHhHHHHHHHHHcCCCeEEEECCCCchH-HHHHhcCCCccCEEEeCCCeEeehHHHHHHHHhC
Confidence 8999999999999999999988865333 35678999999999976 8999999999999974
No 53
>cd03051 GST_N_GTT2_like GST_N family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensitivity to heat shock.
Probab=99.65 E-value=4.9e-16 Score=92.54 Aligned_cols=61 Identities=34% Similarity=0.501 Sum_probs=54.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEe-CCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKL-DEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~-~~~~i~es~aI~~yL~ 61 (164)
|+|+|+|++|+++|++|+.+.++... ..+++.+.||.+++|+|++ +|..++||.+|++||+
T Consensus 10 ~~~~~~~~~L~~~~l~~~~~~v~~~~~~~~~~~~~~~~p~~~vP~l~~~~~~~l~es~aI~~yLe 74 (74)
T cd03051 10 PNPRRVRIFLAEKGIDVPLVTVDLAAGEQRSPEFLAKNPAGTVPVLELDDGTVITESVAICRYLE 74 (74)
T ss_pred cchHHHHHHHHHcCCCceEEEeecccCccCCHHHHhhCCCCCCCEEEeCCCCEEecHHHHHHHhC
Confidence 78999999999999999999988643 4567999999999999985 7789999999999985
No 54
>cd03077 GST_N_Alpha GST_N family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. The class Alpha subfamily is composed of eukaryotic GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GSTA3-3 catalyzes the isomerization of intermediates in steroid hormone biosynthesis. GSTA4-4 preferentially catalyzes the
Probab=99.62 E-value=1.9e-15 Score=91.40 Aligned_cols=62 Identities=16% Similarity=0.253 Sum_probs=52.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcC-----CCCCCceEEeCCeeecchHHHHHHHHhhCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKIS-----PEGKVPVIKLDEKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~-----p~~~~P~L~~~~~~i~es~aI~~yL~~~~~ 65 (164)
+.|+++||+|+++|++|+.+.++.. +++.+.+ |.|++|+|++||.+|+||.||++||+++++
T Consensus 11 ~~~~~v~~~l~~~gi~~e~~~v~~~---~~~~~~~~~~~~~~g~vP~L~~~g~~l~ES~AI~~YL~~~~~ 77 (79)
T cd03077 11 GRMESIRWLLAAAGVEFEEKFIESA---EDLEKLKKDGSLMFQQVPMVEIDGMKLVQTRAILNYIAGKYN 77 (79)
T ss_pred ChHHHHHHHHHHcCCCcEEEEeccH---HHHHhhccccCCCCCCCCEEEECCEEEeeHHHHHHHHHHHcC
Confidence 4678999999999999999988853 2233333 589999999999999999999999999886
No 55
>cd03040 GST_N_mPGES2 GST_N family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated, and a C-terminal soluble domain with a GST-like structure.
Probab=99.58 E-value=3.3e-15 Score=89.82 Aligned_cols=63 Identities=29% Similarity=0.481 Sum_probs=53.9
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeC----CeeecchHHHHHHHHhhCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLD----EKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~----~~~i~es~aI~~yL~~~~~ 65 (164)
|||+|+|++|.++|++|+.+.++.... .++ +.||.+++|+|+++ |.+|+||.+|++||++..+
T Consensus 11 p~c~kv~~~L~~~gi~y~~~~~~~~~~-~~~-~~~~~~~vP~l~~~~~~~~~~l~eS~~I~~yL~~~~~ 77 (77)
T cd03040 11 PFCCKVRAFLDYHGIPYEVVEVNPVSR-KEI-KWSSYKKVPILRVESGGDGQQLVDSSVIISTLKTYLG 77 (77)
T ss_pred HHHHHHHHHHHHCCCceEEEECCchhH-HHH-HHhCCCccCEEEECCCCCccEEEcHHHHHHHHHHHcC
Confidence 799999999999999999998876433 233 56999999999965 7899999999999998753
No 56
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=99.56 E-value=8.9e-15 Score=86.84 Aligned_cols=56 Identities=29% Similarity=0.506 Sum_probs=51.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEK 63 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~ 63 (164)
|||++++++|+++|++|+.+.++.. ..+|.|++|+|+++|..++||.+|++||+++
T Consensus 17 p~~~~v~~~L~~~~i~~~~~~~~~~-------~~~p~g~vP~l~~~g~~l~es~~I~~yL~~~ 72 (72)
T cd03054 17 PECLKVETYLRMAGIPYEVVFSSNP-------WRSPTGKLPFLELNGEKIADSEKIIEYLKKK 72 (72)
T ss_pred HHHHHHHHHHHhCCCceEEEecCCc-------ccCCCcccCEEEECCEEEcCHHHHHHHHhhC
Confidence 7999999999999999999988753 2789999999999999999999999999864
No 57
>cd00570 GST_N_family Glutathione S-transferase (GST) family, N-terminal domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK subfamily, a member of the DsbA family). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal TRX-fold domain and a C-terminal alpha helical doma
Probab=99.53 E-value=3.7e-14 Score=82.98 Aligned_cols=61 Identities=43% Similarity=0.607 Sum_probs=55.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCch-hhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPE-WFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~-~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+|+++|++|+++|++|+.+.++..+... ++++.+|.+++|+|+++|..++||.+|++||+
T Consensus 10 ~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~es~~I~~yl~ 71 (71)
T cd00570 10 PRSLRVRLALEEKGLPYELVPVDLGEGEQEEFLALNPLGKVPVLEDGGLVLTESLAILEYLA 71 (71)
T ss_pred ccHHHHHHHHHHcCCCcEEEEeCCCCCCCHHHHhcCCCCCCCEEEECCEEEEcHHHHHHHhC
Confidence 79999999999999999999998765433 48889999999999999999999999999984
No 58
>KOG3029 consensus Glutathione S-transferase-related protein [General function prediction only]
Probab=99.51 E-value=2e-13 Score=98.09 Aligned_cols=157 Identities=22% Similarity=0.273 Sum_probs=100.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHh--------------hCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEE--------------KYPD 66 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~--------------~~~~ 66 (164)
|||-|+|.+|..-|++|+.++||+-.. .+++- +...++|+|..+|..++||.+|+.-|+- .||.
T Consensus 100 PFCcKVrAFLDyhgisY~VVEVnpV~r-~eIk~-SsykKVPil~~~Geqm~dSsvIIs~laTyLq~~~q~l~eiiq~yPa 177 (370)
T KOG3029|consen 100 PFCCKVRAFLDYHGISYAVVEVNPVLR-QEIKW-SSYKKVPILLIRGEQMVDSSVIISLLATYLQDKRQDLGEIIQMYPA 177 (370)
T ss_pred chHHHHHHHHhhcCCceEEEEecchhh-hhccc-cccccccEEEeccceechhHHHHHHHHHHhccCCCCHHHHHHhccc
Confidence 899999999999999999999997432 22332 3578999999888889999999987732 3341
Q ss_pred CCCCCC----------------------------hHHHhhhhhhHHHHHhh-----------------------------
Q 040329 67 PPLRTP----------------------------PEKASVGSKIFSMFIGF----------------------------- 89 (164)
Q Consensus 67 ~~~~~~----------------------------~~~~~~~~~~~~~~~~~----------------------------- 89 (164)
-...+. .+.-..++|....+.++
T Consensus 178 ~~~~ne~GK~v~~~~NKyflM~~e~d~~~~ke~~~eerkWR~WvDn~lVHLiSPNvYrn~~EsletFewf~q~G~w~~~F 257 (370)
T KOG3029|consen 178 TSFFNEDGKEVNDILNKYFLMYREHDPGVSKETDEEERKWRSWVDNHLVHLISPNVYRNMGESLETFEWFSQAGEWDVHF 257 (370)
T ss_pred cccccccccchhhcchhheeeeeccCCCccccchHHHhHHHHHHhhhhhhhcCcccccChhhHHHHHHHHHHcCCccccC
Confidence 111110 01111223332111111
Q ss_pred ----------------------hcCCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhcc
Q 040329 90 ----------------------LKSKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHY 147 (164)
Q Consensus 90 ----------------------~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~ 147 (164)
...+....+.++.+.+..+.|-..|+..++|+.|++|++||+.+++.|..++.... +
T Consensus 258 pawEr~lavY~GAtAM~lisK~LKkkhni~D~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~a-f 336 (370)
T KOG3029|consen 258 PAWERDLAVYCGATAMYLISKMLKKKHNISDEREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQA-F 336 (370)
T ss_pred chHHHHHHHHhhHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhhH-H
Confidence 11111122244556666777777786688999999999999999999988864321 1
Q ss_pred CCCCCCCCchhhhhhc
Q 040329 148 KNWSVPDSLPHVKSYM 163 (164)
Q Consensus 148 ~~~~~~~~~p~l~~w~ 163 (164)
. ..-+..+|.+|+
T Consensus 337 k---d~~q~t~I~eW~ 349 (370)
T KOG3029|consen 337 K---DCLQNTSIGEWY 349 (370)
T ss_pred H---HHHhcchHHHHH
Confidence 1 124456777775
No 59
>cd03079 GST_N_Metaxin2 GST_N family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=99.50 E-value=9.3e-14 Score=82.16 Aligned_cols=57 Identities=28% Similarity=0.455 Sum_probs=47.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEK 63 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~ 63 (164)
|+|.|++++|++.|++|+.+... .. ...+|.|++|+|++||.+|+||.||+.||+++
T Consensus 18 ~~~~kv~~~L~elglpye~~~~~--~~----~~~~P~GkVP~L~~dg~vI~eS~aIl~yL~~~ 74 (74)
T cd03079 18 ASCLAVQTFLKMCNLPFNVRCRA--NA----EFMSPSGKVPFIRVGNQIVSEFGPIVQFVEAK 74 (74)
T ss_pred CCHHHHHHHHHHcCCCcEEEecC--Cc----cccCCCCcccEEEECCEEEeCHHHHHHHHhcC
Confidence 68999999999999999888332 11 12577899999999999999999999999763
No 60
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=99.49 E-value=1.4e-13 Score=89.79 Aligned_cols=94 Identities=78% Similarity=1.227 Sum_probs=76.8
Q ss_pred CChHHHhhhhhhHHHHHhhhcCCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC
Q 040329 71 TPPEKASVGSKIFSMFIGFLKSKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW 150 (164)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~ 150 (164)
.+.+.+.+.+.+...+..+..++...+...+.+.+.+..+|+.|.++++|++||++|+||+++++.+.++....+.+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~ 82 (121)
T cd03201 3 TPPEKASVGSKIFSTFVGFLKSKDSNDGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIALGHYKNW 82 (121)
T ss_pred CcHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHHHHhcCC
Confidence 45678888888888888888877766777788999999999999644799999999999999999988776544444455
Q ss_pred CCCCCchhhhhhcC
Q 040329 151 SVPDSLPHVKSYMK 164 (164)
Q Consensus 151 ~~~~~~p~l~~w~~ 164 (164)
...+.+|+|.+|++
T Consensus 83 ~~~~~~P~l~~w~~ 96 (121)
T cd03201 83 SVPESLTSVKSYMK 96 (121)
T ss_pred CCcccchHHHHHHH
Confidence 45589999999974
No 61
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=99.40 E-value=1.3e-12 Score=86.14 Aligned_cols=89 Identities=27% Similarity=0.577 Sum_probs=70.2
Q ss_pred HhhhhhhHHHHHhhhcCC--CCCchHHHHHHHHHHHHHHhhhh---------------cCCcccCCCCCcchhhhhhhhH
Q 040329 76 ASVGSKIFSMFIGFLKSK--DPSDGSEQALLNELNSFNDYIKE---------------NGPFIIGGKVSAADLSLGPKFY 138 (164)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~le~~L~~---------------~~~~l~G~~~t~aD~~l~~~l~ 138 (164)
+.+.+.++..+..+..+. ...+..++.+.+.|..||++|.+ +++|++|+++|+|||++++.+.
T Consensus 5 ~~~~~~~f~~~~~~~~~~~~~~~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~ 84 (134)
T cd03198 5 NTAGEDIFAKFSAYIKNSNPALNENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLH 84 (134)
T ss_pred hhhHHHHHHHHHHHHcCCChhhhHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHH
Confidence 446677788888888775 34577788999999999999974 2679999999999999999998
Q ss_pred HHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 139 HLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
++..+...+.++.+++++|+|.+|++
T Consensus 85 ~~~~~~~~~~g~~i~~~~P~L~aw~~ 110 (134)
T cd03198 85 IVKVVAKKYRNFEIPADLTGLWRYLK 110 (134)
T ss_pred HHHHHHHhhcCCCccccCHHHHHHHH
Confidence 87654333335555688999999974
No 62
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.27 E-value=3.7e-12 Score=74.79 Aligned_cols=64 Identities=22% Similarity=0.563 Sum_probs=51.3
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+...+.+.+.++.+|+.|+ +++|++|+++|+||+++++.+.++...... ....+.+|+|.+|++
T Consensus 5 ~~~~~~~~~~l~~le~~L~-~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~---~~~~~~~p~l~~w~~ 68 (69)
T PF13410_consen 5 ERARAQLEAALDALEDHLA-DGPFLFGDRPSLADIALAPFLWRLRFVGPD---FDLLEAYPNLRAWYE 68 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TSSBTTBSS--HHHHHHHHHHHHHHHCTHT---CCHHTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-hCCCCCCCCCCHHHHHHHHHHHHHHHhCcC---cCccccCHHHHHHHh
Confidence 4567788999999999997 567999999999999999999999876432 234589999999984
No 63
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=3.9e-11 Score=80.93 Aligned_cols=139 Identities=17% Similarity=0.329 Sum_probs=90.0
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEE-eCCeeecchHHHHHHHHhhCCCCCCCCChHHHhhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIK-LDEKWLPDSDVITQSLEEKYPDPPLRTPPEKASVG 79 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~-~~~~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~~ 79 (164)
|||.|+||+...+|||++....+.++... -..+-...++|+|+ ++|..+.||..|++|+++..+++- .....+..+.
T Consensus 10 Pfcvrarmi~Gl~nipve~~vL~nDDe~T-p~rmiG~KqVPiL~Kedg~~m~ESlDIV~y~d~~~~~~~-lt~~~~pai~ 87 (215)
T COG2999 10 PFCVRARMIFGLKNIPVELHVLLNDDEET-PIRMIGQKQVPILQKEDGRAMPESLDIVHYVDELDGKPL-LTGKVRPAIE 87 (215)
T ss_pred hHHHHHHHHhhccCCChhhheeccCcccC-hhhhhcccccceEEccccccchhhhHHHHHHHHhcCchh-hccCcCHHHH
Confidence 89999999999999999998887554222 12233367999997 688999999999999999987552 2223333344
Q ss_pred hhhHH-----------HHH-------------hhhcCCCC------------CchHHHHHHHHHHHHHHhhhhcCCcccC
Q 040329 80 SKIFS-----------MFI-------------GFLKSKDP------------SDGSEQALLNELNSFNDYIKENGPFIIG 123 (164)
Q Consensus 80 ~~~~~-----------~~~-------------~~~~~~~~------------~~~~~~~~~~~l~~le~~L~~~~~~l~G 123 (164)
.|+.. .+. .++..+.. .......+...++.++..+.+ ..-+-|
T Consensus 88 ~wlrkv~~y~nkll~PR~~k~~l~EF~T~sA~~yf~~KKe~s~g~F~~~l~~t~~~~~~i~~dl~~l~~Li~~-~s~~n~ 166 (215)
T COG2999 88 AWLRKVNGYLNKLLLPRFAKSALPEFATPSARKYFTDKKEASEGSFESLLNHTAQYLKRIQADLRALDKLIVG-PSAVNG 166 (215)
T ss_pred HHHHHhcchHhhhhhhhHhhcCCccccCHHHHHHHHhhhhhccccHHHHHhchHHHHHHHHHHHHHHHHHhcC-cchhcc
Confidence 44321 111 11111111 112233455567777777753 232333
Q ss_pred CCCCcchhhhhhhhHHHHHh
Q 040329 124 GKVSAADLSLGPKFYHLEIA 143 (164)
Q Consensus 124 ~~~t~aD~~l~~~l~~~~~~ 143 (164)
..+.-|+.+++.|+.+-.+
T Consensus 167 -~l~~ddi~vFplLRnlt~v 185 (215)
T COG2999 167 -ELSEDDILVFPLLRNLTLV 185 (215)
T ss_pred -ccchhhhhhhHHhccceec
Confidence 5999999999999887543
No 64
>KOG2903 consensus Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=4.9e-11 Score=85.01 Aligned_cols=125 Identities=15% Similarity=0.264 Sum_probs=84.3
Q ss_pred CCceEEeC---CeeecchHHHHHHHHhhCC---------CCCCCCChHHHhhhh---hhHHHHHh------hhcCCCCCc
Q 040329 39 KVPVIKLD---EKWLPDSDVITQSLEEKYP---------DPPLRTPPEKASVGS---KIFSMFIG------FLKSKDPSD 97 (164)
Q Consensus 39 ~~P~L~~~---~~~i~es~aI~~yL~~~~~---------~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~ 97 (164)
+||||-|- ..+-.||..|++.+-..+. .-.+.|+.-++++++ |++..+.. +....+.-+
T Consensus 123 TVPVLWD~k~ktIVnNES~eIIr~fNs~f~ef~~~~e~~~lDL~P~~L~~~Ide~N~wvy~~INNGVYk~GFA~~~e~Ye 202 (319)
T KOG2903|consen 123 TVPVLWDLKTKTIVNNESSEIIRMFNSAFDEFNGIAENPVLDLYPSSLRAQIDETNSWVYDKINNGVYKCGFAEKQEAYE 202 (319)
T ss_pred EEEEEEccccceeecCchHHHHHHHhhhhhhhhccccCCccccCCHHHHHHHhhhhceecccccCceeeeccccccchHH
Confidence 79999874 3455999999999984332 123457777888765 45444321 222222334
Q ss_pred hHHHHHHHHHHHHHHhhhhcCC--cccCCCCCcchhhhhhhhHHHHHhhhccCC---CCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGP--FIIGGKVSAADLSLGPKFYHLEIALGHYKN---WSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~--~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~---~~~~~~~p~l~~w~~ 164 (164)
.....+-+.|+.+|++|++ +. |++|+++|-||+.+++.+.++..+....-. ..+++++|+|..|++
T Consensus 203 ~~V~~lfe~LDr~E~vL~~-~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn~~~ir~~Yp~l~~~lk 273 (319)
T KOG2903|consen 203 EEVNQLFEALDRCEDVLGK-NRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCNKKTIRDEYPNLHNWLK 273 (319)
T ss_pred HHHHHHHHHHHHHHHHHhc-ccceEeeccccchhheeeeeeEEeehhhhheeeecchhhhhccCcHHHHHHH
Confidence 5556677889999999973 44 999999999999999999877644321111 123479999999963
No 65
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=99.19 E-value=7.9e-11 Score=73.67 Aligned_cols=91 Identities=14% Similarity=0.250 Sum_probs=64.9
Q ss_pred HHHHHhhCCCCCCCCChHHHhhhhhhHHHHHhhhcCCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhh
Q 040329 57 TQSLEEKYPDPPLRTPPEKASVGSKIFSMFIGFLKSKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPK 136 (164)
Q Consensus 57 ~~yL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~ 136 (164)
+|||++..+-. ..++.+.+.+++|+......+.. .....+.+.+..+|++|. +++|++|+++|+|||++++.
T Consensus 1 ~r~~~~~~~~~-~~~~~~~~~vd~~~d~~~~~l~~------~~~~~~~~~l~~le~~L~-~~~fl~Gd~~tiADi~l~~~ 72 (96)
T cd03200 1 ARFLYRLLGPA-PNAPNAATNIDSWVDTAIFQLAE------GSSKEKAAVLRALNSALG-RSPWLVGSEFTVADIVSWCA 72 (96)
T ss_pred CchHHHHhccc-CCCchHHHHHHHHHHHHHHHHhc------CCHHHHHHHHHHHHHHHc-CCCccCCCCCCHHHHHHHHH
Confidence 47888883211 13567889999998743322221 134556688889999996 67999999999999999988
Q ss_pred hHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 137 FYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 137 l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+.+. +. ..+.+|+|.+|++
T Consensus 73 l~~~--------~~-~~~~~p~l~~w~~ 91 (96)
T cd03200 73 LLQT--------GL-ASAAPANVQRWLK 91 (96)
T ss_pred HHHc--------cc-ccccChHHHHHHH
Confidence 7532 11 2267999999974
No 66
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=4.6e-11 Score=85.88 Aligned_cols=160 Identities=15% Similarity=0.310 Sum_probs=102.7
Q ss_pred ChhHHHHHHHHhcCCCC--ceEecCC--CCC------c----------------hhhhhcCC----CCCCceEEeCC--e
Q 040329 1 PFCQRVLLTIEEKHLPY--DMKLVDL--GNK------P----------------EWFLKISP----EGKVPVIKLDE--K 48 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~--~~~~~~~--~~~------~----------------~~~~~~~p----~~~~P~L~~~~--~ 48 (164)
||++|..++=+.+|++= ....+++ .+. + +-|..-.| .-+||||.|.. +
T Consensus 61 PWAHRTLI~R~LkgLE~~Isvsvv~~~m~~~GW~F~~~~~g~t~dpl~g~~~L~~~Y~~adP~YsgRvTVPVLwDk~~~t 140 (324)
T COG0435 61 PWAHRTLIFRALKGLEPVISVSVVHPLMDENGWTFDPEFPGATGDPLYGIERLSQLYTRADPDYSGRVTVPVLWDKKTQT 140 (324)
T ss_pred chHHHHHHHHHHhcccccceEEEecccccCCCceEcCCCCCCCCCcccchhHHHHHHhhcCCCCCCceeEEEEEecCCCe
Confidence 89999999999999742 1111221 110 0 00112223 34799998743 3
Q ss_pred -eecchHHHHHHHHhhCCC-----CCCCCChHHHhhhhh---hHHHHH-hhhcCC-----CCCchHHHHHHHHHHHHHHh
Q 040329 49 -WLPDSDVITQSLEEKYPD-----PPLRTPPEKASVGSK---IFSMFI-GFLKSK-----DPSDGSEQALLNELNSFNDY 113 (164)
Q Consensus 49 -~i~es~aI~~yL~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~-~~~~~~-----~~~~~~~~~~~~~l~~le~~ 113 (164)
+-.||..|++.+-..+.. ..+.|..-+.+++.+ ++..+. +.+... +.-++.-..+-+.|+.+|+.
T Consensus 141 IVnNES~eIirm~N~aFde~~~~~~dlyP~~Lr~eId~~n~~Iy~~vNNGVYk~GFA~tq~aYeea~~~lF~~Ld~lE~~ 220 (324)
T COG0435 141 IVNNESAEIIRMFNSAFDEFGASAVDLYPEALRTEIDELNKWIYDTVNNGVYKAGFATTQEAYEEAVKKLFEALDKLEQI 220 (324)
T ss_pred eecCCcHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHhhhcccccCceeeecccchHHHHHHHHHHHHHHHHHHHHH
Confidence 339999999999877652 235676666666644 444332 222222 11234445677788999999
Q ss_pred hhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCC----CCCchhhhhhc
Q 040329 114 IKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSV----PDSLPHVKSYM 163 (164)
Q Consensus 114 L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~----~~~~p~l~~w~ 163 (164)
|+ .+.|++||++|-||+-+++.|.++..+. ...+.+ +.++|+|..|+
T Consensus 221 L~-~~ryl~Gd~lTEAD~RLftTlvRFD~VY--vgHFKCN~~rI~dypnL~~yL 271 (324)
T COG0435 221 LS-ERRYLTGDQLTEADIRLFTTLVRFDPVY--VGHFKCNLRRIRDYPNLWGYL 271 (324)
T ss_pred hh-cCeeeccccchHhhhhhhheeEeecceE--EeeeecccchhhcCchHHHHH
Confidence 96 6899999999999999999998776432 222323 46699999986
No 67
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=99.16 E-value=6.7e-11 Score=77.03 Aligned_cols=92 Identities=17% Similarity=0.355 Sum_probs=59.4
Q ss_pred ChHHHhhhhhhHH--HHHhhhcCCCCCchHHHHHHHHHHHHHHhhhh--cCCcccCCCCCcchhhhhhhhHHHHHhhhcc
Q 040329 72 PPEKASVGSKIFS--MFIGFLKSKDPSDGSEQALLNELNSFNDYIKE--NGPFIIGGKVSAADLSLGPKFYHLEIALGHY 147 (164)
Q Consensus 72 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~--~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~ 147 (164)
+..|+++++++.. .+......+.-.....+.+.+.++.+|+.|++ +++|++| ++|+||+++++++.++.......
T Consensus 2 ~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~~ 80 (120)
T cd03203 2 PAKREFADELLAYTDAFTKALYSSLIKGDPSAEAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSEL 80 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHHh
Confidence 4567888887644 22211111100001133557788889999963 5799999 99999999999998775432222
Q ss_pred CCCCCCCCchhhhhhcC
Q 040329 148 KNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 148 ~~~~~~~~~p~l~~w~~ 164 (164)
.++...+.+|+|.+|++
T Consensus 81 ~~~~~~~~~P~l~~W~~ 97 (120)
T cd03203 81 FNYDITEGRPNLAAWIE 97 (120)
T ss_pred cCccccccCcHHHHHHH
Confidence 34444578999999974
No 68
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.16 E-value=5.8e-11 Score=73.86 Aligned_cols=62 Identities=23% Similarity=0.448 Sum_probs=50.6
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCC-CCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVP-DSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~-~~~p~l~~w~~ 164 (164)
+.....+.+.+..+|+.|+ +++|++|+++|+||+++++.+.++...... .. +++|+|.+|++
T Consensus 27 ~~~~~~~~~~l~~le~~l~-~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~-----~~~~~~P~l~~w~~ 89 (95)
T PF00043_consen 27 EEARAKVPRYLEVLEKRLK-GGPYLVGDKLTIADIALFPMLDWLERLGPD-----FLFEKFPKLKKWYE 89 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TSSSSSBSS-CHHHHHHHHHHHHHHHHTTT-----TTHTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-CCCeeeccCCchhHHHHHHHHHHHHHhCCC-----cccccCHHHHHHHH
Confidence 3445678888999999997 899999999999999999999988764332 33 89999999974
No 69
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=99.14 E-value=2.9e-10 Score=74.40 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=55.1
Q ss_pred CCCCchHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 93 KDPSDGSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 93 ~~~~~~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+...+...+.+.+.+..+|+.|.+ +++|++|+++|+||+++++++.++.............+.+|+|++|++
T Consensus 27 ~~~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~w~~ 99 (124)
T cd03184 27 PSDREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLLGYEFPLDRFPKLKKWMD 99 (124)
T ss_pred cccchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhccccCCcccChHHHHHHH
Confidence 444567778899999999999974 479999999999999999999877644321111123488999999974
No 70
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=99.13 E-value=1.6e-10 Score=73.51 Aligned_cols=62 Identities=19% Similarity=0.403 Sum_probs=48.9
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+...+.+.+.+..+|+.|+ +++|++|+++|+|||++++.+..+.. .++.....+|+|++|++
T Consensus 34 ~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aDi~~~~~~~~~~~-----~~~~~~~~~p~l~~w~~ 95 (107)
T cd03186 34 EKARKELRESLLALAPVFA-HKPYFMSEEFSLVDCALAPLLWRLPA-----LGIELPKQAKPLKDYME 95 (107)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCCcccCCCCcHHHHHHHHHHHHHHH-----cCCCCcccchHHHHHHH
Confidence 3455678889999999996 68999999999999999999865542 22333467999999974
No 71
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=99.11 E-value=1.3e-10 Score=77.86 Aligned_cols=66 Identities=14% Similarity=0.402 Sum_probs=49.6
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhc-c-CCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGH-Y-KNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~-~-~~~~~~~~~p~l~~w~~ 164 (164)
.....+.+.+..+|+.|. +++|++|+++|+||+++++.+.++...... . .+....+.+|+|.+|++
T Consensus 37 ~~~~~l~~~l~~LE~~L~-~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~ 104 (142)
T cd03190 37 EAVDELFEALDRLEELLS-DRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLR 104 (142)
T ss_pred HHHHHHHHHHHHHHHHHc-cCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHH
Confidence 455678888999999996 679999999999999999999876432111 1 11223468999999974
No 72
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.11 E-value=2.5e-10 Score=73.77 Aligned_cols=65 Identities=15% Similarity=0.305 Sum_probs=50.3
Q ss_pred CchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 96 SDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 96 ~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.+...+.+.+.+..+|+.|+ +++|++|+++|+||+++++.+.++.... ......+.+|+|.+|++
T Consensus 39 ~~~~~~~i~~~l~~le~~L~-~~~yl~Gd~~tlADi~l~~~l~~~~~~~---~~~~~~~~~P~L~~w~~ 103 (115)
T cd03196 39 EEEYRQQAEAFLKDLEARLQ-QHSYLLGDKPSLADWAIFPFVRQFAHVD---PKWFDQSPYPRLRRWLN 103 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHc-cCCccCCCCccHHHHHHHHHHHHHHHhh---hcccCcccCHHHHHHHH
Confidence 34556788999999999996 5789999999999999999887664321 11122488999999974
No 73
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.10 E-value=6e-11 Score=74.60 Aligned_cols=62 Identities=24% Similarity=0.403 Sum_probs=47.2
Q ss_pred CchHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 96 SDGSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 96 ~~~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.+...+.+.+.+..+|++|+. +++|++|++||+||+++++.|..+... . ..+++|+|.+|++
T Consensus 33 ~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~--~-----~~~~~p~L~~w~~ 95 (99)
T PF14497_consen 33 GDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA--D-----FPKDYPNLVRWYE 95 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC--H-----HTTTCHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc--c-----cccccHHHHHHHH
Confidence 456677899999999999974 334999999999999999999666521 1 1168999999974
No 74
>KOG3027 consensus Mitochondrial outer membrane protein Metaxin 2, Metaxin 1-binding protein [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.06 E-value=5.7e-09 Score=72.21 Aligned_cols=152 Identities=15% Similarity=0.247 Sum_probs=104.9
Q ss_pred hHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCC-CCCCCChHHHhhhhh
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPD-PPLRTPPEKASVGSK 81 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~-~~~~~~~~~~~~~~~ 81 (164)
|..+.-+|..+++||..+.-+- .+| ++|.|++|.|..|.++++|-..|+.+..++--. .++.....++.++..
T Consensus 37 cLAVqtfLrMcnLPf~v~~~~N----aef--mSP~G~vPllr~g~~~~aef~pIV~fVeak~~~l~s~lsE~qkadmra~ 110 (257)
T KOG3027|consen 37 CLAVQTFLRMCNLPFNVRQRAN----AEF--MSPGGKVPLLRIGKTLFAEFEPIVDFVEAKGVTLTSWLSEDQKADMRAY 110 (257)
T ss_pred HHHHHHHHHHcCCCceeeecCC----ccc--cCCCCCCceeeecchhhhhhhHHHHHHHHhccchhhhhhhHHHHHHHHH
Confidence 6788899999999998875442 122 578999999999999999999999999987532 334455555543321
Q ss_pred hH-------------------------------------HH-------------HHhhhcCCCCCchHHHHHHHHHHHHH
Q 040329 82 IF-------------------------------------SM-------------FIGFLKSKDPSDGSEQALLNELNSFN 111 (164)
Q Consensus 82 ~~-------------------------------------~~-------------~~~~~~~~~~~~~~~~~~~~~l~~le 111 (164)
+. .+ +..+.++....+...+.+.+..+.++
T Consensus 111 vslVen~~t~aEl~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLs 190 (257)
T KOG3027|consen 111 VSLVENLLTTAELYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALS 190 (257)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHH
Confidence 10 00 01111223334566677888899999
Q ss_pred HhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC---CCCCCchhhhhhc
Q 040329 112 DYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW---SVPDSLPHVKSYM 163 (164)
Q Consensus 112 ~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~---~~~~~~p~l~~w~ 163 (164)
..|+ .++||.|++||=.|..+++.+..+-..- .++- ...+.|+||-+++
T Consensus 191 a~L~-~q~yf~g~~P~elDAlvFGHlytilTt~--Lpn~ela~~lkkys~Llefc 242 (257)
T KOG3027|consen 191 AQLG-SQPYFTGDQPTELDALVFGHLYTILTTR--LPNMELANILKKYSNLLEFC 242 (257)
T ss_pred HHhc-CCCccCCCCccHHHHHHHhhhHHhhhhc--CCcHHHHHHHHHhHHHHHHH
Confidence 9995 7899999999999999999997775321 1111 1236677776654
No 75
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=99.05 E-value=5.3e-10 Score=73.08 Aligned_cols=66 Identities=14% Similarity=0.265 Sum_probs=50.8
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCC--CCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWS--VPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~--~~~~~p~l~~w~~ 164 (164)
+.....+.+.+..+|+.|. +++|++|+++|+||+++++.+.++..... ..+.. ..+.+|++.+|++
T Consensus 34 ~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~ADi~l~~~~~~~~~~~~-~~~~~~~~~~~~p~l~~w~~ 101 (126)
T cd03185 34 EKAKEEALEALKVLEEELG-GKPFFGGDTIGYVDIALGSFLGWFRAYEE-VGGVKLLDEEKTPLLAAWAE 101 (126)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHHHHHHHHH-HcCccccCcccCchHHHHHH
Confidence 3456678889999999996 57999999999999999999988754322 12222 2377999999974
No 76
>cd03078 GST_N_Metaxin1_like GST_N family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins including Tom37 from fungi. Mammalian metaxin (or metaxin 1) and the fungal protein Tom37 are components of preprotein import complexes of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals.
Probab=99.02 E-value=1.1e-09 Score=65.00 Aligned_cols=56 Identities=21% Similarity=0.298 Sum_probs=47.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEK 63 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~ 63 (164)
|+|.|+.+.|+.+|++|+.+..+- -...|.|++|+|+++|..+.+|..|++||.++
T Consensus 17 p~clk~~~~Lr~~~~~~~v~~~~n-------~~~sp~gkLP~l~~~~~~i~d~~~Ii~~L~~~ 72 (73)
T cd03078 17 PECLAVLAYLKFAGAPLKVVPSNN-------PWRSPTGKLPALLTSGTKISGPEKIIEYLRKQ 72 (73)
T ss_pred HHHHHHHHHHHcCCCCEEEEecCC-------CCCCCCCccCEEEECCEEecChHHHHHHHHHc
Confidence 799999999999999998774331 12357899999999999999999999999864
No 77
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=99.00 E-value=1.2e-09 Score=70.70 Aligned_cols=65 Identities=22% Similarity=0.459 Sum_probs=51.9
Q ss_pred CCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 94 DPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 94 ~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+...+.+.+.+..+|+.|+ +++|++|+++|+||+++++.+.++.... +.. ...+|+|.+|++
T Consensus 34 ~~~~~~~~~~~~~l~~le~~L~-~~~~l~G~~~s~aDi~l~~~~~~~~~~~----~~~-~~~~p~l~~w~~ 98 (118)
T cd03177 34 EPPEEKLDKLEEALDFLETFLE-GSDYVAGDQLTIADLSLVATVSTLEALL----PLD-LSKYPNVRAWLE 98 (118)
T ss_pred CCCHHHHHHHHHHHHHHHHHHc-cCCeeCCCCcCHHHHHHHHHHHHHHHhc----CCC-hhhCchHHHHHH
Confidence 3456677789999999999995 5789999999999999999998885311 122 367999999974
No 78
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.00 E-value=8.6e-10 Score=72.18 Aligned_cols=64 Identities=16% Similarity=0.215 Sum_probs=52.6
Q ss_pred CchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 96 SDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 96 ~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.+...+.+.+.++.+|+.|+ +++|+.|+++|+||+++++.+.+..... +....+++|+|.+|++
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~-~~~fl~Gd~~t~AD~~l~~~l~~~~~~~----~~~~~~~~p~l~~W~~ 119 (124)
T cd03202 56 REAALANFRAALEPLRATLK-GQPFLGGAAPNYADYIVFGGFQWARIVS----PFPLLEEDDPVYDWFE 119 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHc-CCCccCCCCCchhHHHHHHHHHHHHHcC----cccccccCChHHHHHH
Confidence 45667789999999999996 6889999999999999999998876421 2234578999999974
No 79
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.96 E-value=1.1e-09 Score=68.22 Aligned_cols=64 Identities=19% Similarity=0.443 Sum_probs=51.7
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+...+.+.+.++.+|+.|+ +++|++|+++|+||+++++++.++....... + ..+.+|+|.+|++
T Consensus 35 ~~~~~~~~~~~~~l~~~L~-~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~~-~--~~~~~p~l~~~~~ 98 (100)
T cd00299 35 EEAREELAAALAALEKLLA-GRPYLAGDRFSLADIALAPVLARLDLLGPLL-G--LLDEYPRLAAWYD 98 (100)
T ss_pred HHHHHHHHHHHHHHHHHHc-cCCCCCCCCcCHHHHHHHHHHHHHHHhhhhh-h--hhccCccHHHHHH
Confidence 3456678889999999996 6789999999999999999999987643321 1 3478999999974
No 80
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=98.96 E-value=1.3e-09 Score=70.25 Aligned_cols=61 Identities=16% Similarity=0.375 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.+..+|+.|+ +++|++|+++|+||+++++.+.++... +.+....+|+|.+|++
T Consensus 49 ~~~~~l~~~l~~le~~L~-~~~~l~gd~~t~aDi~l~~~~~~~~~~-----~~~~~~~~p~l~~w~~ 109 (117)
T cd03182 49 RSKARAADFLAYLDTRLA-GSPYVAGDRFTIADITAFVGLDFAKVV-----KLRVPEELTHLRAWYD 109 (117)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCcccCCCCCHHHHHHHHHhHHHHhc-----CCCCccccHHHHHHHH
Confidence 345678889999999996 678999999999999999999877542 2233468999999974
No 81
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=98.93 E-value=1.9e-09 Score=70.58 Aligned_cols=62 Identities=26% Similarity=0.460 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.+..+|+.|.++++|++|+++|+||+++++.+.+... .+.+.++.+|+|.+|++
T Consensus 45 ~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~-----~~~~~~~~~p~l~~w~~ 106 (126)
T cd03183 45 KAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEA-----AGYDVFEGRPKLAAWRK 106 (126)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHh-----cCCcccccCchHHHHHH
Confidence 344568888999999753457899999999999999998866642 12223588999999974
No 82
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=98.93 E-value=1.4e-09 Score=69.74 Aligned_cols=60 Identities=18% Similarity=0.345 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.+..+|+.|. +++|++|+++|+|||++++.+.++... +.. .+.+|+|.+|++
T Consensus 43 ~~~~~~~~~l~~le~~l~-~~~~l~G~~~t~aDi~~~~~~~~~~~~-----~~~-~~~~p~l~~w~~ 102 (114)
T cd03188 43 AARERLAARLAYLDAQLA-GGPYLLGDRFSVADAYLFVVLRWAPGV-----GLD-LSDWPNLAAYLA 102 (114)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCeeeCCCcchHHHHHHHHHHHHhhc-----CCC-hhhChHHHHHHH
Confidence 345678888999999996 678999999999999999999876531 122 367999999974
No 83
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=98.93 E-value=4.4e-10 Score=69.06 Aligned_cols=64 Identities=16% Similarity=0.232 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC---CCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW---SVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~---~~~~~~p~l~~w~~ 164 (164)
...+.+.+.+..+|+.|+ +++|++|+++|+|||++++.+.++.... +... ...+++|+|.+|++
T Consensus 19 ~~~~~~~~~l~~le~~L~-~~~yl~Gd~~t~aDi~l~~~l~~~~~~~--~~~~~~~~~~~~~p~l~~~~~ 85 (88)
T cd03193 19 EIYSLAKKDLKALSDLLG-DKKFFFGDKPTSLDATVFGHLASILYAP--LPNSALQLILKEYPNLVEYCE 85 (88)
T ss_pred HHHHHHHHHHHHHHHHhC-CCCccCCCCCCHHHHHHHHHHHHHHhcC--CCChHHHHHHHhCcHHHHHHH
Confidence 556788999999999996 6789999999999999999998775321 0110 12367999999974
No 84
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.92 E-value=2.5e-09 Score=68.43 Aligned_cols=66 Identities=17% Similarity=0.270 Sum_probs=48.7
Q ss_pred chHHHHHHHHHHHHHHhhhhc---------CCcccCCCCCcchhhhhhhhHHHHHhhhccCC-CCCCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKEN---------GPFIIGGKVSAADLSLGPKFYHLEIALGHYKN-WSVPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~---------~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~-~~~~~~~p~l~~w~~ 164 (164)
+.....+.+.+..+|+.|.+. ++|++|+++|+||+++++.+.++.... +.. ......+|+|.+|++
T Consensus 28 ~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~--~~~~~~~~~~~P~l~~w~~ 103 (111)
T cd03204 28 KKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLG--LSRRYWGNGKRPNLEAYFE 103 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcC--ccccccccccChHHHHHHH
Confidence 345567888899999999632 159999999999999999998876421 111 001367999999974
No 85
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=98.91 E-value=2e-09 Score=70.11 Aligned_cols=60 Identities=22% Similarity=0.424 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 99 SEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 99 ~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
..+.+.+.+..+|+.|. +++|++|+++|+||+++++.+.++..... ...+.+|+|.+|++
T Consensus 36 ~~~~~~~~l~~le~~L~-~~~~l~G~~~T~aDi~l~~~~~~~~~~~~-----~~~~~~P~l~~~~~ 95 (121)
T cd03209 36 YLAKLPDKLKLFSDFLG-DRPWFAGDKITYVDFLLYEALDQHRIFEP-----DCLDAFPNLKDFLE 95 (121)
T ss_pred HHHHHHHHHHHHHHHhC-CCCCcCCCCccHHHHHHHHHHHHHHHhCc-----cccccChHHHHHHH
Confidence 45567888999999996 67899999999999999999988864211 23478999999963
No 86
>TIGR02190 GlrX-dom Glutaredoxin-family domain. This C-terminal domain with homology to glutaredoxin is fused to an N-terminal peroxiredoxin-like domain.
Probab=98.91 E-value=3.8e-09 Score=63.62 Aligned_cols=61 Identities=20% Similarity=0.335 Sum_probs=53.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|||.+++.+|...|++|+.+.++-.....++...++..++|++..||..|.++..|.+||+
T Consensus 19 p~C~~ak~~L~~~gi~y~~idi~~~~~~~~~~~~~g~~~vP~i~i~g~~igG~~~l~~~l~ 79 (79)
T TIGR02190 19 PFCAKAKATLKEKGYDFEEIPLGNDARGRSLRAVTGATTVPQVFIGGKLIGGSDELEAYLA 79 (79)
T ss_pred HhHHHHHHHHHHcCCCcEEEECCCChHHHHHHHHHCCCCcCeEEECCEEEcCHHHHHHHhC
Confidence 7999999999999999999888755444557777788999999999999999999999984
No 87
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=98.91 E-value=2.1e-09 Score=69.58 Aligned_cols=58 Identities=17% Similarity=0.351 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 100 EQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 100 ~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+..+|+.|. +++|++|+++|+||+++++.+.++... +. ..+.+|+|.+|++
T Consensus 56 ~~~~~~~l~~le~~L~-~~~~l~Gd~~t~ADi~l~~~~~~~~~~-----~~-~~~~~p~l~~w~~ 113 (119)
T cd03189 56 NPELKKHLDFLEDRLA-KKGYFVGDKLTAADIMMSFPLEAALAR-----GP-LLEKYPNIAAYLE 113 (119)
T ss_pred hHHHHHHHHHHHHHHc-cCCCCCCCCCCHHHHHHHHHHHHHHHc-----Cc-ccccCchHHHHHH
Confidence 3468888999999996 679999999999999999888776431 11 3478999999974
No 88
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=98.90 E-value=1.8e-09 Score=70.80 Aligned_cols=62 Identities=23% Similarity=0.348 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHHHHhhhh--cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKE--NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~--~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.+..+|+.|.+ +++|++|+++|+||+++++.+.++..... ...+.+|+|.+|++
T Consensus 35 ~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~~-----~~~~~~P~l~~~~~ 98 (126)
T cd03210 35 DYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLAP-----GCLDAFPLLKAFVE 98 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhCh-----HhhhcChHHHHHHH
Confidence 3445677889999999974 46899999999999999999987764211 12478899999974
No 89
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.90 E-value=2.2e-09 Score=68.31 Aligned_cols=60 Identities=20% Similarity=0.340 Sum_probs=47.5
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.++.+|+.|. +++|++|+++|+||+++++.+...... +. ..+.+|+|.+|++
T Consensus 43 ~~~~~~~~~l~~lE~~L~-~~~~l~g~~~t~aDi~~~~~~~~~~~~-----~~-~~~~~p~l~~~~~ 102 (110)
T cd03180 43 ASLAAWAKLMAILDAQLA-GRPYLAGDRFTLADIPLGCSAYRWFEL-----PI-ERPPLPHLERWYA 102 (110)
T ss_pred HHHHHHHHHHHHHHHHhC-CCCcccCCCCCHHHHHHHHHHHHHHHc-----cc-ccccCchHHHHHH
Confidence 345678899999999996 578999999999999999998544221 11 2488999999974
No 90
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=98.90 E-value=1.5e-09 Score=70.00 Aligned_cols=61 Identities=26% Similarity=0.362 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 99 SEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 99 ~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
....+.+.++.+|+.|+ +++|++|+++|+||+++++.+.++... . .....+.+|+|.+|++
T Consensus 46 ~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aDi~l~~~~~~~~~~-~---~~~~~~~~p~l~~~~~ 106 (118)
T cd03187 46 NEEKLKKVLDVYEARLS-KSKYLAGDSFTLADLSHLPYLQYLMAT-P---FAKLFDSRPHVKAWWE 106 (118)
T ss_pred HHHHHHHHHHHHHHHcc-cCcccCCCCccHHHHHHHHHHHHHHHc-c---chhhhhcCchHHHHHH
Confidence 45578888999999996 679999999999999999999877531 1 1112468999999974
No 91
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=98.89 E-value=2.6e-09 Score=71.11 Aligned_cols=58 Identities=22% Similarity=0.325 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 102 ALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 102 ~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.+.+.+..+|+.|.+ +++|++|+++|+||+++++.+.++..... ...+.+|+|.+|++
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~~-----~~l~~~P~l~~~~~ 101 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELDP-----SLLSDFPLLQAFKT 101 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhch-----hhhccChHHHHHHH
Confidence 457889999999963 56899999999999999999988754221 23478899998863
No 92
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=98.88 E-value=2.9e-09 Score=68.26 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.....+.+.++.+|+.|+ +++|++|+++|+||+++++.+.+.... +....+.+|+|.+|++
T Consensus 40 ~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aDi~l~~~~~~~~~~-----~~~~~~~~p~l~~w~~ 100 (113)
T cd03178 40 RYTNEAKRLYGVLDKRLA-GRDYLAGDEYSIADIAIFPWVRRLEWI-----GIDDLDDFPNVKRWLD 100 (113)
T ss_pred HHHHHHHHHHHHHHHHHc-cCCcccCCCCCeeeeeHHHHHHHHHhc-----cccchhhchHHHHHHH
Confidence 345678888999999996 679999999999999999999887542 1223478999999974
No 93
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.88 E-value=2.1e-09 Score=67.90 Aligned_cols=60 Identities=12% Similarity=0.230 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.++.+|+.|+ +++|++|+++|+||+++++.+.++.. .+.+ ...+|+|.+|++
T Consensus 43 ~~~~~~~~~l~~le~~L~-~~~~l~g~~~slaDi~~~~~~~~~~~-----~~~~-~~~~p~l~~~~~ 102 (105)
T cd03179 43 FLRERGHAALAVLEAHLA-GRDFLVGDALTIADIALAAYTHVADE-----GGFD-LADYPAIRAWLA 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHc-cCccccCCCCCHHHHHHHHHHHhccc-----cCCC-hHhCccHHHHHH
Confidence 455678888999999995 67899999999999999999987753 1222 477999999974
No 94
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.88 E-value=3.6e-09 Score=66.48 Aligned_cols=61 Identities=10% Similarity=0.189 Sum_probs=48.4
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+.....+.+.+..+|+.|+ +++|++|+++|+||+++++++.+... .. ...+.+|+|.+|++
T Consensus 32 ~~~~~~~~~~l~~le~~L~-~~~~l~G~~~t~aDi~~~~~~~~~~~-----~~-~~~~~~p~l~~~~~ 92 (100)
T cd03206 32 ETAIARAHRLLRLLEEHLA-GRDWLAGDRPTIADVAVYPYVALAPE-----GG-VDLEDYPAIRRWLA 92 (100)
T ss_pred HHHHHHHHHHHHHHHHHHc-cCCccCCCCCCHHHHHHHHHHHHHhc-----cC-CChhhCcHHHHHHH
Confidence 4556788999999999996 67899999999999999998865432 11 12378999999974
No 95
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.87 E-value=3.4e-09 Score=66.89 Aligned_cols=60 Identities=17% Similarity=0.300 Sum_probs=49.4
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+...+.+.+.+..+|+.|+ +++|++|+++|+||+++++.+.+.... + ..+.+|+|.+|++
T Consensus 29 ~~~~~~~~~~l~~le~~l~-~~~~l~g~~~t~aDi~~~~~~~~~~~~-----~--~~~~~p~l~~w~~ 88 (103)
T cd03207 29 MAGFGSYDDVLAALEQALA-KGPYLLGERFTAADVLVGSPLGWGLQF-----G--LLPERPAFDAYIA 88 (103)
T ss_pred hhhhhhHHHHHHHHHHHHc-cCCcccCCccCHHHHHHHHHHHHHHHc-----C--CCCCChHHHHHHH
Confidence 3445678999999999996 678999999999999999999887632 1 2378999999974
No 96
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.86 E-value=2.6e-09 Score=67.55 Aligned_cols=63 Identities=21% Similarity=0.251 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.+..+|+.|.+ +++|++|+++|+||+++++++.++...... .....+|+|.+|++
T Consensus 39 ~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~~~----~~~~~~p~l~~~~~ 102 (104)
T cd03192 39 FLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLDPK----LLLKKYPKLKALRE 102 (104)
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhCch----hhHHhChhHHHHHH
Confidence 3455678889999999963 278999999999999999999888643211 11478999999975
No 97
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.81 E-value=1.7e-08 Score=67.39 Aligned_cols=109 Identities=15% Similarity=0.089 Sum_probs=69.3
Q ss_pred eeecchHHHHHHHHhhCCCCCCCCChHHHhh---hhhhHHHHHhhhcCCCCC-chHHHHHHHHHHHHHHhhhhcCCcccC
Q 040329 48 KWLPDSDVITQSLEEKYPDPPLRTPPEKASV---GSKIFSMFIGFLKSKDPS-DGSEQALLNELNSFNDYIKENGPFIIG 123 (164)
Q Consensus 48 ~~i~es~aI~~yL~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~le~~L~~~~~~l~G 123 (164)
....|+.+-..|+..... ++..++..+ ....+..+......+... ++.++.+-..++.+-+.+.++++|++|
T Consensus 29 rt~~ea~~~f~yi~~~~~----f~~~er~~~~~~Ga~aM~~isk~lkk~~~i~~D~r~~L~~a~~~w~~~~~~~~~FlaG 104 (149)
T cd03197 29 RTWSEALASFDYITPSGY----FGYWEKFFAKYVGAAAMYLISKYLKKPRLLQDDVREWLYDALNTWVAALGKDRQFHGG 104 (149)
T ss_pred CCHHHHHHhhhhHhcCCC----ccHHHHHHHHHhhHHHHHHHHHHhccccCCCchHHHHHHHHHHHHHHHhcCCCCccCC
Confidence 345677777777764322 222232221 122223333333333333 556778888888777777556789999
Q ss_pred CCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 124 GKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 124 ~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
+++|+||+++++.+..+... .++....++|+|.+|++
T Consensus 105 d~ptIADisvyg~l~s~e~~----~~~~Dl~~~p~I~~W~e 141 (149)
T cd03197 105 SKPNLADLAVYGVLRSVEGH----PAFKDMVEETKIGEWYE 141 (149)
T ss_pred CCCCHHHHHHHHHHHHHHHh----ccccchhhCcCHHHHHH
Confidence 99999999999999877643 23323478999999984
No 98
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=98.80 E-value=9.2e-09 Score=66.79 Aligned_cols=59 Identities=15% Similarity=0.322 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHhhhh-cCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 100 EQALLNELNSFNDYIKE-NGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 100 ~~~~~~~l~~le~~L~~-~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.+.+.+.+..+|+.|++ +++|++|+++|+||+++++.+.+.... +.. .+.+|+|.+|++
T Consensus 46 ~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~-----~~~-~~~~p~l~~w~~ 105 (121)
T cd03191 46 RHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRF-----GVD-LSPYPTIARINE 105 (121)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHh-----CCC-cccCcHHHHHHH
Confidence 34578889999999964 357999999999999999998765431 222 378999999974
No 99
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=98.78 E-value=6e-09 Score=68.38 Aligned_cols=72 Identities=6% Similarity=0.114 Sum_probs=53.6
Q ss_pred CCCCCchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC-CCCCCchhhhhhcC
Q 040329 92 SKDPSDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW-SVPDSLPHVKSYMK 164 (164)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~-~~~~~~p~l~~w~~ 164 (164)
+....++..+...+.+..+++.|+ +++||+||+||.+|+++++.+..+......-... ...+++|||.+|++
T Consensus 51 gr~~~ee~~~~~~~~l~aLs~~Lg-~~~~l~Gd~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~ 123 (126)
T cd03211 51 DDKTLDQVIEEVDQCCQALSQRLG-TQPYFFGDQPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCR 123 (126)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHH
Confidence 344556777888999999999995 6899999999999999999987775321100011 12478999999974
No 100
>cd03029 GRX_hybridPRX5 Glutaredoxin (GRX) family, PRX5 hybrid subfamily; composed of hybrid proteins containing peroxiredoxin (PRX) and GRX domains, which is found in some pathogenic bacteria and cyanobacteria. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins. PRX-GRX hybrid proteins from Haemophilus influenza and Neisseria meningitis exhibit GSH-dependent peroxidase activity. The flow of reducing equivalents in the catalytic cycle of the hybrid protein goes from NADPH - GSH reductase - GSH - GRX domain of hybrid - PRX domain of hybrid - peroxide substrate.
Probab=98.74 E-value=4.2e-08 Score=57.91 Aligned_cols=61 Identities=18% Similarity=0.333 Sum_probs=52.0
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|||.+++.+|...|++|+.+.++......++.......++|++..||..+.++..|.+||+
T Consensus 12 p~C~~ak~~L~~~~i~~~~~~v~~~~~~~~~~~~~g~~~vP~ifi~g~~igg~~~l~~~l~ 72 (72)
T cd03029 12 PFCARAKAALQENGISYEEIPLGKDITGRSLRAVTGAMTVPQVFIDGELIGGSDDLEKYFA 72 (72)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCChhHHHHHHHhCCCCcCeEEECCEEEeCHHHHHHHhC
Confidence 7999999999999999999888755433445566677899999999999999999999974
No 101
>PRK10638 glutaredoxin 3; Provisional
Probab=98.73 E-value=3.8e-08 Score=59.77 Aligned_cols=60 Identities=25% Similarity=0.341 Sum_probs=51.9
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSL 60 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL 60 (164)
|||++++.+|++.|++|+.+.++... ..+++.+.++.+++|++..||..|.....+..+-
T Consensus 13 p~C~~a~~~L~~~gi~y~~~dv~~~~~~~~~l~~~~g~~~vP~i~~~g~~igG~~~~~~~~ 73 (83)
T PRK10638 13 PFCHRAKALLNSKGVSFQEIPIDGDAAKREEMIKRSGRTTVPQIFIDAQHIGGCDDLYALD 73 (83)
T ss_pred hhHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHHHHH
Confidence 79999999999999999999887653 4566888999999999999999998887777653
No 102
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=98.63 E-value=2.3e-08 Score=65.00 Aligned_cols=63 Identities=11% Similarity=0.188 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
...+.+.+.+..+|+.|+ +++|++|+++|+||+++++.+.++..... +....+.+|++.+|++
T Consensus 40 ~~~~~~~~~l~~le~~l~-~~~~l~G~~~siaDi~l~~~~~~~~~~~~---~~~~~~~~p~l~~w~~ 102 (123)
T cd03181 40 AALEELDRVLGVLEERLL-KRTYLVGERLTLADIFVAGALLLGFTYVF---DKEWRAKYPNVTRWFN 102 (123)
T ss_pred HHHHHHHHHHHHHHHHHc-cCceeccCCccHHHHHHHHHHHHHHHHHc---CHHHHHhChHHHHHHH
Confidence 345677888999999996 67899999999999999999987643211 1112367899999873
No 103
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.55 E-value=2.3e-07 Score=59.73 Aligned_cols=60 Identities=18% Similarity=0.402 Sum_probs=43.9
Q ss_pred CchHHHHHHHHHHHHHHhhh--hcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 96 SDGSEQALLNELNSFNDYIK--ENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 96 ~~~~~~~~~~~l~~le~~L~--~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.+...+.+.+.+..+|..+. ++++|++|+ +|+||+++++.+.++... +.+. .|+|.+|++
T Consensus 39 ~~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~-----~~~~---~P~l~~~~~ 100 (114)
T cd03194 39 SEAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTY-----GLPL---SPAAQAYVD 100 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHc-----CCCC---CHHHHHHHH
Confidence 45666777888888888875 257899999 999999999998877531 1111 278877763
No 104
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.50 E-value=2e-07 Score=58.32 Aligned_cols=60 Identities=10% Similarity=0.191 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.....+.+.+..+|+.|+ +++| +++|+||+++++.+.+...... +....+++|+|.+|++
T Consensus 37 ~~~~~~~~~l~~le~~L~-~~~~---d~~TlADi~l~~~l~~~~~~~~---~~~~~~~~p~l~~w~~ 96 (98)
T cd03205 37 RQRGKIERALDALEAELA-KLPL---DPLDLADIAVACALGYLDFRHP---DLDWRAAHPALAAWYA 96 (98)
T ss_pred HHHHHHHHHHHHHHHhhh-hCCC---CCCCHHHHHHHHHHHHHHhHcc---CcchhhhChHHHHHHH
Confidence 455678889999999996 5788 8999999999999988864221 1223478999999974
No 105
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.50 E-value=3.1e-07 Score=59.13 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=43.9
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhc
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYM 163 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~ 163 (164)
+...+.+.+.+..+|..|.++++|++| ++|+||+++++.+.++... +.+. . |++.+|+
T Consensus 41 ~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~-----g~~l-~--p~l~ay~ 98 (114)
T cd03195 41 EAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLN-----GDPV-P--ERLRDYA 98 (114)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHc-----CCCC-C--HHHHHHH
Confidence 456667788899999999645589999 5999999999999888642 2222 2 6777665
No 106
>KOG3028 consensus Translocase of outer mitochondrial membrane complex, subunit TOM37/Metaxin 1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.44 E-value=2.4e-06 Score=62.91 Aligned_cols=153 Identities=18% Similarity=0.128 Sum_probs=92.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeC-CeeecchHHHHHHHHhhCCCCCC---CCChHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLD-EKWLPDSDVITQSLEEKYPDPPL---RTPPEKA 76 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~-~~~i~es~aI~~yL~~~~~~~~~---~~~~~~~ 76 (164)
|-|..+.+.++.++-+.+.+..+-.. ..|.|++|+|+.+ |..++.-..|+.+|.....+-.+ ......+
T Consensus 18 ~~sL~~l~y~kl~~~~l~v~~ssN~~-------~s~sg~LP~l~~~ng~~va~~~~iv~~L~k~~~ky~~d~dl~~kq~a 90 (313)
T KOG3028|consen 18 PDSLAALIYLKLAGAPLKVVVSSNPW-------RSPSGKLPYLITDNGTKVAGPVKIVQFLKKNTKKYNLDADLSAKQLA 90 (313)
T ss_pred hhHHHHHHHHHHhCCCceeEeecCCC-------CCCCCCCCeEEecCCceeccHHHHHHHHHHhcccCCcCccHHHHHHH
Confidence 45788999999999665555443221 3568999999865 59999999999999984221111 1112222
Q ss_pred hhh-------hhhHHHHHh------------------------------------------hhcCCCC--CchHHHHHHH
Q 040329 77 SVG-------SKIFSMFIG------------------------------------------FLKSKDP--SDGSEQALLN 105 (164)
Q Consensus 77 ~~~-------~~~~~~~~~------------------------------------------~~~~~~~--~~~~~~~~~~ 105 (164)
... .++...+.. ...+... .+.......+
T Consensus 91 ~~~a~~sll~~~l~~a~~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Ask 170 (313)
T KOG3028|consen 91 DTLAFMSLLEENLEPALLYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASK 170 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHH
Confidence 211 111110000 0011111 2344556677
Q ss_pred HHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCC---CCCchhhhhhc
Q 040329 106 ELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSV---PDSLPHVKSYM 163 (164)
Q Consensus 106 ~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~---~~~~p~l~~w~ 163 (164)
.+..+++.|+ .+.|++||++|--|+.+++.+..+-... .|+-.+ ...++||.+|+
T Consensus 171 a~~~LS~~Lg-s~kffFgd~psslDa~lfs~la~~~~~~--Lp~~~Lq~~l~~~~NL~~~~ 228 (313)
T KOG3028|consen 171 ALNLLSTLLG-SKKFFFGDKPSSLDALLFSYLAILLQVA--LPNDSLQVHLLAHKNLVRYV 228 (313)
T ss_pred HHHHHHHHhc-CceEeeCCCCchHHHHHHHHHHHHHhcc--CCchhHHHHHHhcchHHHHH
Confidence 8888999995 7899999999999999999998732211 122111 24477777664
No 107
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=98.44 E-value=9.3e-08 Score=63.62 Aligned_cols=66 Identities=14% Similarity=0.084 Sum_probs=49.3
Q ss_pred CchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC---CCCCCchhhhhhcC
Q 040329 96 SDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW---SVPDSLPHVKSYMK 164 (164)
Q Consensus 96 ~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~---~~~~~~p~l~~w~~ 164 (164)
.++..+...+.+..+++.|. +++|++|+++|.+|+++++.+..+.... .+.. .....+|||.+|++
T Consensus 62 ~~~~~~~a~~~l~~l~~~L~-~~~~~~Gd~~t~~D~~~~~~l~~~~~~~--~~~~~l~~~~~~~pnL~~~~~ 130 (137)
T cd03212 62 EAEIYRDAKECLNLLSQRLG-ESQFFFGDTPTSLDALVFGYLAPLLKAP--LPNNKLQNHLKQCPNLCRFCD 130 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCCcCCCCCCcHHHHHHHHHHHHHHhcc--CCChHHHHHHHHCcHHHHHHH
Confidence 34556677888999999995 6899999999999999999987664211 1110 12477999999874
No 108
>cd03027 GRX_DEP Glutaredoxin (GRX) family, Dishevelled, Egl-10, and Pleckstrin (DEP) subfamily; composed of uncharacterized proteins containing a GRX domain and additional domains DEP and DUF547, both of which have unknown functions. GRX is a glutathione (GSH) dependent reductase containing a redox active CXXC motif in a TRX fold. It has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. By altering the redox state of target proteins, GRX is involved in many cellular functions.
Probab=98.33 E-value=1.7e-06 Score=51.06 Aligned_cols=57 Identities=25% Similarity=0.263 Sum_probs=46.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVIT 57 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~ 57 (164)
|+|++++.+|++.|++|+.+.++-.. ..+++++.++.+++|++..||..|..-....
T Consensus 12 ~~C~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~~g~~~vP~v~i~~~~iGg~~~~~ 69 (73)
T cd03027 12 EDCTAVRLFLREKGLPYVEINIDIFPERKAELEERTGSSVVPQIFFNEKLVGGLTDLK 69 (73)
T ss_pred hhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEeCHHHHH
Confidence 79999999999999999998876432 3456888899999999999998886655443
No 109
>cd02066 GRX_family Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which
Probab=98.29 E-value=2.1e-06 Score=49.95 Aligned_cols=59 Identities=17% Similarity=0.244 Sum_probs=49.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|+|++++.+|...|++|+.+.++... ...++.+.++..++|++..+|..+.++..|.+.
T Consensus 11 p~C~~~~~~L~~~~i~~~~~di~~~~~~~~~l~~~~~~~~~P~~~~~~~~igg~~~~~~~ 70 (72)
T cd02066 11 PYCKRAKRLLESLGIEFEEIDILEDGELREELKELSGWPTVPQIFINGEFIGGYDDLKAL 70 (72)
T ss_pred HHHHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHhCCCCcCEEEECCEEEecHHHHHHh
Confidence 79999999999999999887776443 345577788899999999999999998887654
No 110
>PRK10329 glutaredoxin-like protein; Provisional
Probab=98.23 E-value=2.5e-06 Score=51.51 Aligned_cols=50 Identities=16% Similarity=0.182 Sum_probs=38.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeee
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWL 50 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i 50 (164)
|||.+++-+|.++||+|+.+.++-.....+....++..++|+++.++..+
T Consensus 12 p~C~~ak~~L~~~gI~~~~idi~~~~~~~~~~~~~g~~~vPvv~i~~~~~ 61 (81)
T PRK10329 12 VQCHATKRAMESRGFDFEMINVDRVPEAAETLRAQGFRQLPVVIAGDLSW 61 (81)
T ss_pred HhHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCCCcCEEEECCEEE
Confidence 79999999999999999999887543222223346888999999888655
No 111
>cd02976 NrdH NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, cou
Probab=98.23 E-value=3.8e-06 Score=49.05 Aligned_cols=52 Identities=23% Similarity=0.440 Sum_probs=42.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecc
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPD 52 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~e 52 (164)
|+|.+++.+|.+.|++|..+.++... ..+++.+.+|.+++|++.++|..+.+
T Consensus 11 ~~c~~~~~~l~~~~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~i~~~~~~i~g 63 (73)
T cd02976 11 PYCKATKRFLDERGIPFEEVDVDEDPEALEELKKLNGYRSVPVVVIGDEHLSG 63 (73)
T ss_pred hhHHHHHHHHHHCCCCeEEEeCCCCHHHHHHHHHHcCCcccCEEEECCEEEec
Confidence 68999999999999999988887542 23468888999999999998876643
No 112
>TIGR02196 GlrX_YruB Glutaredoxin-like protein, YruB-family. This glutaredoxin-like protein family contains the conserved CxxC motif and includes the Clostridium pasteurianum protein YruB which has been cloned from a rubredoxin operon. Somewhat related to NrdH, it is unknown whether this protein actually interacts with glutathione/glutathione reducatase, or, like NrdH, some other reductant system.
Probab=98.17 E-value=5.9e-06 Score=48.31 Aligned_cols=60 Identities=25% Similarity=0.354 Sum_probs=46.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeee--cchHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWL--PDSDVITQSL 60 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i--~es~aI~~yL 60 (164)
|+|++++.+|++.|++|..+.++-.. ..+++.+.++.+.+|++.++|..+ .+..+|.++|
T Consensus 11 ~~C~~~~~~l~~~~i~~~~vdi~~~~~~~~~~~~~~~~~~vP~~~~~~~~~~g~~~~~i~~~i 73 (74)
T TIGR02196 11 PPCKKAKEYLTSKGIAFEEIDVEKDSAAREEVLKVLGQRGVPVIVIGHKIIVGFDPEKLDQLL 73 (74)
T ss_pred hhHHHHHHHHHHCCCeEEEEeccCCHHHHHHHHHHhCCCcccEEEECCEEEeeCCHHHHHHHh
Confidence 78999999999999999877665432 223467778889999999988777 6666666654
No 113
>PF10568 Tom37: Outer mitochondrial membrane transport complex protein; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=98.06 E-value=1.3e-05 Score=47.15 Aligned_cols=53 Identities=21% Similarity=0.391 Sum_probs=44.2
Q ss_pred ChhHHHHHHHHhcCCC---CceEecCCCCCchhhhhcCCCCCCceEEe-CCeeecchHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLP---YDMKLVDLGNKPEWFLKISPEGKVPVIKL-DEKWLPDSDVITQSL 60 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~---~~~~~~~~~~~~~~~~~~~p~~~~P~L~~-~~~~i~es~aI~~yL 60 (164)
|-|..+.++|+.++.+ |+.+..+-. .+.|.|++|+|.+ ++..+.+-..|++||
T Consensus 15 ~ecLa~~~yl~~~~~~~~~~~vv~s~n~-------~~Sptg~LP~L~~~~~~~vsg~~~Iv~yL 71 (72)
T PF10568_consen 15 PECLAVIAYLKFAGAPEQQFKVVPSNNP-------WLSPTGELPALIDSGGTWVSGFRNIVEYL 71 (72)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEEcCCC-------CcCCCCCCCEEEECCCcEEECHHHHHHhh
Confidence 4688999999999999 666654421 2578899999999 899999999999998
No 114
>COG0695 GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=98.02 E-value=2.5e-05 Score=46.98 Aligned_cols=59 Identities=20% Similarity=0.294 Sum_probs=45.0
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC--Cchh-hhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN--KPEW-FLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~--~~~~-~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|||.++.-+|..+|++|+.+.++... ...+ .+..++..++|++..||..+.....+-++
T Consensus 12 PyC~~ak~~L~~~g~~~~~i~~~~~~~~~~~~~~~~~~g~~tvP~I~i~~~~igg~~d~~~~ 73 (80)
T COG0695 12 PYCKRAKRLLDRKGVDYEEIDVDDDEPEEAREMVKRGKGQRTVPQIFIGGKHVGGCDDLDAL 73 (80)
T ss_pred chHHHHHHHHHHcCCCcEEEEecCCcHHHHHHHHHHhCCCCCcCEEEECCEEEeCcccHHHH
Confidence 89999999999999999999888665 2223 44455889999999999777554443333
No 115
>cd03418 GRX_GRXb_1_3_like Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known i
Probab=98.00 E-value=1.9e-05 Score=46.67 Aligned_cols=60 Identities=22% Similarity=0.269 Sum_probs=46.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCC-CCceEEeCCeeecchHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEG-KVPVIKLDEKWLPDSDVITQSL 60 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~-~~P~L~~~~~~i~es~aI~~yL 60 (164)
|+|.+++-+|...|++|+.+.++... ...++....... .+|++..+|..+.....+.++-
T Consensus 11 p~C~~ak~~L~~~~i~~~~i~i~~~~~~~~~~~~~~~~~~~vP~v~i~g~~igg~~~~~~~~ 72 (75)
T cd03418 11 PYCVRAKALLDKKGVDYEEIDVDGDPALREEMINRSGGRRTVPQIFIGDVHIGGCDDLYALE 72 (75)
T ss_pred hHHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCccCEEEECCEEEeChHHHHHHH
Confidence 79999999999999999998887541 122344444444 8999999999998888877663
No 116
>TIGR02181 GRX_bact Glutaredoxin, GrxC family. This family of glutaredoxins includes the E. coli protein GrxC (Grx3) which appears to have a secondary role in reducing ribonucleotide reductase (in the absence of GrxA) possibly indicating a role in the reduction of other protein disulfides.
Probab=97.99 E-value=2.5e-05 Score=46.68 Aligned_cols=61 Identities=18% Similarity=0.234 Sum_probs=49.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+|.+++-+|++.|++|+.+.++... ...++.+.+....+|++..+|..+.....+..+-.
T Consensus 10 p~C~~a~~~L~~~~i~~~~~di~~~~~~~~~~~~~~g~~~vP~i~i~g~~igg~~~~~~~~~ 71 (79)
T TIGR02181 10 PYCTRAKALLSSKGVTFTEIRVDGDPALRDEMMQRSGRRTVPQIFIGDVHVGGCDDLYALDR 71 (79)
T ss_pred hhHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHHhCCCCcCEEEECCEEEcChHHHHHHHH
Confidence 79999999999999999999887542 23446666667899999999999888777766543
No 117
>TIGR02194 GlrX_NrdH Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.
Probab=97.93 E-value=1.6e-05 Score=46.74 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=36.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCe
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEK 48 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~ 48 (164)
|+|++++-+|.+.|++|+.+.++-.....+.....+...+|+++.+|.
T Consensus 10 p~C~~ak~~L~~~~i~~~~~di~~~~~~~~~~~~~g~~~vP~v~~~g~ 57 (72)
T TIGR02194 10 VQCKMTKKALEEHGIAFEEINIDEQPEAIDYVKAQGFRQVPVIVADGD 57 (72)
T ss_pred HHHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHcCCcccCEEEECCC
Confidence 799999999999999999988875432222333346779999998664
No 118
>PF00462 Glutaredoxin: Glutaredoxin; InterPro: IPR002109 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This entry represents Glutaredoxin.; GO: 0009055 electron carrier activity, 0015035 protein disulfide oxidoreductase activity, 0045454 cell redox homeostasis; PDB: 1QFN_A 1GRX_A 1EGO_A 1EGR_A 3RHC_A 3RHB_A 3IPZ_A 1NHO_A 3GX8_A 3D5J_A ....
Probab=97.82 E-value=1e-05 Score=45.86 Aligned_cols=50 Identities=28% Similarity=0.515 Sum_probs=41.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC-CCchhhhhcCCCCCCceEEeCCeee
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG-NKPEWFLKISPEGKVPVIKLDEKWL 50 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~-~~~~~~~~~~p~~~~P~L~~~~~~i 50 (164)
|+|.+++-+|...|++|+.+.++.. +..+++++.+...++|++..||..|
T Consensus 10 ~~C~~~~~~L~~~~i~y~~~dv~~~~~~~~~l~~~~g~~~~P~v~i~g~~I 60 (60)
T PF00462_consen 10 PYCKKAKEFLDEKGIPYEEVDVDEDEEAREELKELSGVRTVPQVFIDGKFI 60 (60)
T ss_dssp HHHHHHHHHHHHTTBEEEEEEGGGSHHHHHHHHHHHSSSSSSEEEETTEEE
T ss_pred cCHHHHHHHHHHcCCeeeEcccccchhHHHHHHHHcCCCccCEEEECCEEC
Confidence 7899999999999999999988865 2344566666778999999988754
No 119
>TIGR02183 GRXA Glutaredoxin, GrxA family. This model includes the E. coli glyutaredoxin GrxA which appears to have primary responsibility for the reduction of ribonucleotide reductase.
Probab=97.77 E-value=0.00013 Score=44.50 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=48.5
Q ss_pred ChhHHHHHHHHhcC-----CCCceEecCCCC-CchhhhhcCCC--CCCceEEeCCeeecchHHHHHHHHhhCC
Q 040329 1 PFCQRVLLTIEEKH-----LPYDMKLVDLGN-KPEWFLKISPE--GKVPVIKLDEKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 1 P~~~~~r~~L~~~g-----i~~~~~~~~~~~-~~~~~~~~~p~--~~~P~L~~~~~~i~es~aI~~yL~~~~~ 65 (164)
|||.+++-+|...+ ++|+.+.++... ...++...... ..+|++..||..+.++..|..++.++++
T Consensus 11 p~C~~ak~~L~~~~~~~~~i~~~~idi~~~~~~~~~l~~~~g~~~~tVP~ifi~g~~igG~~dl~~~~~~~~~ 83 (86)
T TIGR02183 11 PYCVRAKQLAEKLAIERADFEFRYIDIHAEGISKADLEKTVGKPVETVPQIFVDEKHVGGCTDFEQLVKENFD 83 (86)
T ss_pred ccHHHHHHHHHHhCcccCCCcEEEEECCCCHHHHHHHHHHhCCCCCCcCeEEECCEEecCHHHHHHHHHhccc
Confidence 89999999999985 556666555322 12335444432 6899999999999999999999888764
No 120
>cd03419 GRX_GRXh_1_2_like Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins similar to human GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH - GSH reductase - GSH - GRX - protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes
Probab=97.75 E-value=0.00018 Score=43.09 Aligned_cols=62 Identities=15% Similarity=0.320 Sum_probs=51.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCc----hhhhhcCCCCCCceEEeCCeeecchHHHHHHHHh
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKP----EWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEE 62 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~----~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~ 62 (164)
|+|.+++-+|...+++|+.+.++..+.. ..+.+.+....+|++..+|..+.+...+.++..+
T Consensus 11 p~C~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~~~P~v~~~g~~igg~~~~~~~~~~ 76 (82)
T cd03419 11 PYCKRAKSLLKELGVKPAVVELDQHEDGSEIQDYLQELTGQRTVPNVFIGGKFIGGCDDLMALHKS 76 (82)
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHHc
Confidence 7999999999999999999988876542 2355666678999999999999999988887654
No 121
>PRK11200 grxA glutaredoxin 1; Provisional
Probab=97.72 E-value=0.00016 Score=43.91 Aligned_cols=65 Identities=18% Similarity=0.237 Sum_probs=51.0
Q ss_pred ChhHHHHHHHHh-----cCCCCceEecCCCC-CchhhhhcCC--CCCCceEEeCCeeecchHHHHHHHHhhCC
Q 040329 1 PFCQRVLLTIEE-----KHLPYDMKLVDLGN-KPEWFLKISP--EGKVPVIKLDEKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 1 P~~~~~r~~L~~-----~gi~~~~~~~~~~~-~~~~~~~~~p--~~~~P~L~~~~~~i~es~aI~~yL~~~~~ 65 (164)
|+|.+++-+|.. .|++|+.+.++... ..+++..... ...+|++..||..+.....|..++...++
T Consensus 12 ~~C~~a~~~L~~l~~~~~~i~~~~idi~~~~~~~~el~~~~~~~~~~vP~ifi~g~~igg~~~~~~~~~~~~~ 84 (85)
T PRK11200 12 PYCVRAKELAEKLSEERDDFDYRYVDIHAEGISKADLEKTVGKPVETVPQIFVDQKHIGGCTDFEAYVKENLG 84 (85)
T ss_pred hhHHHHHHHHHhhcccccCCcEEEEECCCChHHHHHHHHHHCCCCCcCCEEEECCEEEcCHHHHHHHHHHhcc
Confidence 799999999999 89999888887432 1233444332 25899999999999999999999988764
No 122
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=97.67 E-value=0.00031 Score=44.02 Aligned_cols=59 Identities=10% Similarity=0.082 Sum_probs=46.7
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCch----hhhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPE----WFLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~----~~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|||.+++-+|...|++|+.+.+|...... ++...+...++|.+..+|..|.....+...
T Consensus 19 p~C~~ak~~L~~~~i~~~~vdid~~~~~~~~~~~l~~~tg~~tvP~Vfi~g~~iGG~ddl~~l 81 (99)
T TIGR02189 19 CMCHVVKRLLLTLGVNPAVHEIDKEPAGKDIENALSRLGCSPAVPAVFVGGKLVGGLENVMAL 81 (99)
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCCCccHHHHHHHHHHhcCCCCcCeEEECCEEEcCHHHHHHH
Confidence 89999999999999999999888543322 355566778999999999888777665553
No 123
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=97.64 E-value=0.0002 Score=44.01 Aligned_cols=59 Identities=8% Similarity=0.135 Sum_probs=46.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|||.+++-+|...|++|+.+.++-.. ...++.+.+...++|.+..+|..|.....+...
T Consensus 24 p~C~~ak~~L~~~~i~y~~idv~~~~~~~~~l~~~~g~~tvP~vfi~g~~iGG~~~l~~l 83 (90)
T cd03028 24 GFSRKVVQILNQLGVDFGTFDILEDEEVRQGLKEYSNWPTFPQLYVNGELVGGCDIVKEM 83 (90)
T ss_pred cHHHHHHHHHHHcCCCeEEEEcCCCHHHHHHHHHHhCCCCCCEEEECCEEEeCHHHHHHH
Confidence 79999999999999999998876432 223456666677999999999988888777664
No 124
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=97.61 E-value=0.00023 Score=44.40 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=45.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|||.+++-+|...|++|+.+.++-.. ...++.+.+...++|.+..||..|.....+...
T Consensus 28 p~C~~ak~lL~~~~i~~~~~di~~~~~~~~~l~~~tg~~tvP~vfi~g~~iGG~ddl~~l 87 (97)
T TIGR00365 28 GFSARAVQILKACGVPFAYVNVLEDPEIRQGIKEYSNWPTIPQLYVKGEFVGGCDIIMEM 87 (97)
T ss_pred chHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHhCCCCCCEEEECCEEEeChHHHHHH
Confidence 89999999999999999887775221 123455667677999999999888777666554
No 125
>TIGR02200 GlrX_actino Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.
Probab=97.58 E-value=0.00011 Score=43.40 Aligned_cols=54 Identities=15% Similarity=0.418 Sum_probs=40.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCC-chhhhhcC-CCCCCceEEe-CCeeecchH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNK-PEWFLKIS-PEGKVPVIKL-DEKWLPDSD 54 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~-~~~~~~~~-p~~~~P~L~~-~~~~i~es~ 54 (164)
|+|++++.+|.+.|++|+.+.++-... ...+.+.| +...+|+++. +|..+.+..
T Consensus 11 ~~C~~~~~~L~~~~~~~~~idi~~~~~~~~~~~~~~~~~~~vP~i~~~~g~~l~~~~ 67 (77)
T TIGR02200 11 GYCAQLMRTLDKLGAAYEWVDIEEDEGAADRVVSVNNGNMTVPTVKFADGSFLTNPS 67 (77)
T ss_pred hhHHHHHHHHHHcCCceEEEeCcCCHhHHHHHHHHhCCCceeCEEEECCCeEecCCC
Confidence 689999999999999998877664432 34456676 8899999974 666765543
No 126
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=97.57 E-value=2.5e-05 Score=49.56 Aligned_cols=67 Identities=18% Similarity=0.201 Sum_probs=43.5
Q ss_pred CchHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCC-----CCCCCchhhhhhc
Q 040329 96 SDGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNW-----SVPDSLPHVKSYM 163 (164)
Q Consensus 96 ~~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~-----~~~~~~p~l~~w~ 163 (164)
.+.......+.+...+..|..|++||.|+ +||||..+++++.++.......|.. ...-+.|.+++|+
T Consensus 41 s~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~gd~vP~~l~~Ya~~qwqrpsVQ~Wl 112 (117)
T PF14834_consen 41 SEAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTYGDPVPERLADYAERQWQRPSVQRWL 112 (117)
T ss_dssp -HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTTT----HHHHHHHHHHHT-HHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCHHHHHHH
Confidence 45667788888999999998789999996 9999999999999886322111110 0014568888886
No 127
>PHA03050 glutaredoxin; Provisional
Probab=97.55 E-value=0.00048 Score=43.88 Aligned_cols=58 Identities=17% Similarity=0.335 Sum_probs=45.7
Q ss_pred ChhHHHHHHHHhcCC---CCceEecCCCCC----chhhhhcCCCCCCceEEeCCeeecchHHHHH
Q 040329 1 PFCQRVLLTIEEKHL---PYDMKLVDLGNK----PEWFLKISPEGKVPVIKLDEKWLPDSDVITQ 58 (164)
Q Consensus 1 P~~~~~r~~L~~~gi---~~~~~~~~~~~~----~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~ 58 (164)
|||.+++-+|...|+ +|+.+.++-... ..++.+.+...++|.+..+|..|.....+..
T Consensus 24 PyC~~ak~~L~~~~i~~~~~~~i~i~~~~~~~~~~~~l~~~tG~~tVP~IfI~g~~iGG~ddl~~ 88 (108)
T PHA03050 24 PFCRNALDILNKFSFKRGAYEIVDIKEFKPENELRDYFEQITGGRTVPRIFFGKTSIGGYSDLLE 88 (108)
T ss_pred hHHHHHHHHHHHcCCCcCCcEEEECCCCCCCHHHHHHHHHHcCCCCcCEEEECCEEEeChHHHHH
Confidence 899999999999999 788888874322 3457777777899999999988877665554
No 128
>TIGR02180 GRX_euk Glutaredoxin. This model represents eukaryotic glutaredoxins and includes sequences from fungi, plants and metazoans as well as viruses.
Probab=97.53 E-value=0.00073 Score=40.50 Aligned_cols=61 Identities=15% Similarity=0.355 Sum_probs=49.0
Q ss_pred ChhHHHHHHHHhcCCC--CceEecCCCCCch----hhhhcCCCCCCceEEeCCeeecchHHHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLP--YDMKLVDLGNKPE----WFLKISPEGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~--~~~~~~~~~~~~~----~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
|+|.+++-+|...+++ |+.+.++..+... .+.+.+....+|.+..+|..+..+..+.++..
T Consensus 10 p~C~~~~~~L~~~~i~~~~~~~~v~~~~~~~~~~~~l~~~~g~~~vP~v~i~g~~igg~~~~~~~~~ 76 (84)
T TIGR02180 10 PYCKKAKEILAKLNVKPAYEVVELDQLSNGSEIQDYLEEITGQRTVPNIFINGKFIGGCSDLLALYK 76 (84)
T ss_pred hhHHHHHHHHHHcCCCCCCEEEEeeCCCChHHHHHHHHHHhCCCCCCeEEECCEEEcCHHHHHHHHH
Confidence 8999999999999999 8888887654332 24555666789999999999999888877654
No 129
>cd03031 GRX_GRX_like Glutaredoxin (GRX) family, GRX-like domain containing protein subfamily; composed of uncharacterized eukaryotic proteins containing a GRX-like domain having only one conserved cysteine, aligning to the C-terminal cysteine of the CXXC motif of GRXs. This subfamily is predominantly composed of plant proteins. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins via a redox active CXXC motif using a similar dithiol mechanism employed by TRXs. GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. Proteins containing only the C-terminal cysteine are generally redox inactive.
Probab=97.00 E-value=0.0025 Score=42.83 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=45.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCC----CCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISP----EGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p----~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|+|.+++-+|+..||+|+.+.+++.. ..+++++... ...+|.+..+|..|.....+.+.
T Consensus 17 ~~C~~ak~iL~~~~V~~~e~DVs~~~~~~~EL~~~~g~~~~~~tvPqVFI~G~~IGG~del~~L 80 (147)
T cd03031 17 EDCNNVRAILESFRVKFDERDVSMDSGFREELRELLGAELKAVSLPRVFVDGRYLGGAEEVLRL 80 (147)
T ss_pred hhHHHHHHHHHHCCCcEEEEECCCCHHHHHHHHHHhCCCCCCCCCCEEEECCEEEecHHHHHHH
Confidence 79999999999999999998887642 2344555533 36899999999888777766653
No 130
>PRK10824 glutaredoxin-4; Provisional
Probab=96.63 E-value=0.0091 Score=38.41 Aligned_cols=59 Identities=8% Similarity=0.063 Sum_probs=46.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|||.++.-+|...|++|..+.++-.. -..++...+-..++|-+..+|.-|.....+...
T Consensus 31 pyc~~ak~lL~~~~i~~~~idi~~d~~~~~~l~~~sg~~TVPQIFI~G~~IGG~ddl~~l 90 (115)
T PRK10824 31 GFSAQAVQALSACGERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEM 90 (115)
T ss_pred chHHHHHHHHHHcCCCceEEEecCCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHHH
Confidence 79999999999999999888776431 223466667778999999999988777666654
No 131
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=96.45 E-value=0.028 Score=35.51 Aligned_cols=59 Identities=14% Similarity=0.257 Sum_probs=47.9
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchh----hhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEW----FLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~----~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|||.++.-+|...|+.+..+++|-.....+ +.+..-..++|.+..+|+-|.....+..+
T Consensus 25 ~~c~~~k~ll~~~~v~~~vvELD~~~~g~eiq~~l~~~tg~~tvP~vFI~Gk~iGG~~dl~~l 87 (104)
T KOG1752|consen 25 PYCHRAKELLSDLGVNPKVVELDEDEDGSEIQKALKKLTGQRTVPNVFIGGKFIGGASDLMAL 87 (104)
T ss_pred chHHHHHHHHHhCCCCCEEEEccCCCCcHHHHHHHHHhcCCCCCCEEEECCEEEcCHHHHHHH
Confidence 799999999999999999999987765444 33455567999999999998777776654
No 132
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=95.95 E-value=0.01 Score=47.51 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=58.9
Q ss_pred eCCeeecchHHHHHHHHhhCCC-CCCCC-ChHHHhhhhhhHHHHHhhhcCCCCCchHHHHHHHHHHHHHHhhhhcCCccc
Q 040329 45 LDEKWLPDSDVITQSLEEKYPD-PPLRT-PPEKASVGSKIFSMFIGFLKSKDPSDGSEQALLNELNSFNDYIKENGPFII 122 (164)
Q Consensus 45 ~~~~~i~es~aI~~yL~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L~~~~~~l~ 122 (164)
-+|..+..+..+..|.++.... +.+++ ..++.+++.|+..... .....+...+..++..|. -..||+
T Consensus 43 ~d~~~l~~a~~~~~~~~~~~~~~~~lf~~~~d~~~vd~w~~~s~~----------~~~~~~s~~~~~ld~~l~-~~t~lv 111 (712)
T KOG1147|consen 43 LDGRKLNGATEPVVYSAALAKADPKLFGNNIDRSQVDHWVSFSST----------FSFDEISSSLSELDKFLV-LRTFLV 111 (712)
T ss_pred cccccccCCccchhhhhhhcccCHhHcCCcccHHHHHHHHHHhhh----------cchHHHHHHHHHHHhhhh-HHHHhh
Confidence 3456666666677776643332 22443 4788999998854432 223456777888888886 578999
Q ss_pred CCCCCcchhhhhhhhHH
Q 040329 123 GGKVSAADLSLGPKFYH 139 (164)
Q Consensus 123 G~~~t~aD~~l~~~l~~ 139 (164)
|.++|+||+++|+.+..
T Consensus 112 g~sls~Ad~aiw~~l~~ 128 (712)
T KOG1147|consen 112 GNSLSIADFAIWGALHS 128 (712)
T ss_pred ccchhHHHHHHHHHHhc
Confidence 99999999999999964
No 133
>PTZ00062 glutaredoxin; Provisional
Probab=95.81 E-value=0.032 Score=39.62 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=44.3
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQ 58 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~ 58 (164)
|||.++.-+|...|++|+...++-.. ....+++.+...++|.+..+|..|.....+.+
T Consensus 129 ~~C~~~k~~L~~~~i~y~~~DI~~d~~~~~~l~~~sg~~TvPqVfI~G~~IGG~d~l~~ 187 (204)
T PTZ00062 129 RFSNAVVNMLNSSGVKYETYNIFEDPDLREELKVYSNWPTYPQLYVNGELIGGHDIIKE 187 (204)
T ss_pred hhHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHhCCCCCCeEEECCEEEcChHHHHH
Confidence 78999999999999999887776332 22345566666799999999988877766555
No 134
>PRK12759 bifunctional gluaredoxin/ribonucleoside-diphosphate reductase subunit beta; Provisional
Probab=95.79 E-value=0.029 Score=44.13 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=42.5
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCCCCchhhh-h--------cCCCCCCceEEeCCeeecchHHHHH
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLGNKPEWFL-K--------ISPEGKVPVIKLDEKWLPDSDVITQ 58 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~-~--------~~p~~~~P~L~~~~~~i~es~aI~~ 58 (164)
|||.++.-+|...||+|+.+.++-.....++. . .+....+|++..||..|..-..+..
T Consensus 13 p~C~~aK~~L~~~gi~~~~idi~~~~~~~~~~~~~~~~~~~~~~g~~tvP~ifi~~~~igGf~~l~~ 79 (410)
T PRK12759 13 PFCDLAKSWFGANDIPFTQISLDDDVKRAEFYAEVNKNILLVEEHIRTVPQIFVGDVHIGGYDNLMA 79 (410)
T ss_pred HHHHHHHHHHHHCCCCeEEEECCCChhHHHHHHHHhhccccccCCCCccCeEEECCEEEeCchHHHH
Confidence 89999999999999999998887332222222 2 1356689999999988866665544
No 135
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=95.63 E-value=0.1 Score=34.20 Aligned_cols=59 Identities=25% Similarity=0.377 Sum_probs=40.7
Q ss_pred chHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 97 DGSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 97 ~~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
......+...|..++..+. .+-.++.++|+-|+.+++.|+.+..+. +...+ |++..|++
T Consensus 59 ~~~i~~l~~~L~~l~~ll~--~~~~~n~~ls~DDi~lFp~LR~Lt~vk----gi~~P---~~V~~Y~~ 117 (128)
T cd03199 59 PQYIAALNALLEELDPLIL--SSEAVNGQLSTDDIILFPILRNLTLVK----GLVFP---PKVKAYLE 117 (128)
T ss_pred HHHHHHHHHHHHHHHHHHc--CccccCCcCCHHHHHHHHHHhhhhhhc----CCCCC---HHHHHHHH
Confidence 3455667777788888884 233355679999999999999887542 33333 67777763
No 136
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=95.48 E-value=0.064 Score=33.06 Aligned_cols=56 Identities=18% Similarity=0.315 Sum_probs=40.5
Q ss_pred hHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCC----CCCCceEEeCCeeecchHHHHH
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISP----EGKVPVIKLDEKWLPDSDVITQ 58 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p----~~~~P~L~~~~~~i~es~aI~~ 58 (164)
|++++.+|..+||+|+.+.++... ...++.+..+ ...+|-+..++.-+.+...+.+
T Consensus 19 ~~~v~~lL~~k~I~f~eiDI~~d~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ddl~~ 79 (92)
T cd03030 19 QQEVLGFLEAKKIEFEEVDISMNEENRQWMRENVPNENGKPLPPQIFNGDEYCGDYEAFFE 79 (92)
T ss_pred HHHHHHHHHHCCCceEEEecCCCHHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCHHHHHH
Confidence 788999999999999999988653 2234444433 4789988888887766654443
No 137
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=94.57 E-value=0.069 Score=35.21 Aligned_cols=58 Identities=28% Similarity=0.453 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHHHhhhccCCCCCCCCchhhhhhcC
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLEIALGHYKNWSVPDSLPHVKSYMK 164 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~~~~~~~~~~~~~~~~p~l~~w~~ 164 (164)
.....+...|..+|..+. .+...+.++|+-|+.+++.|+.+..+ ++...+ |++.+|++
T Consensus 59 ~~i~~l~~~L~~Le~ll~--~~~~~n~~LS~dDi~lFp~LR~Ltiv----kgi~~P---~~V~~Y~~ 116 (132)
T PF04399_consen 59 ELIAELNADLEELEPLLA--SPNAVNGELSIDDIILFPILRSLTIV----KGIQWP---PKVRAYMD 116 (132)
T ss_dssp HHHHHHHHHHHHHHHH-S--CTTBTTSS--HHHHHHHHHHHHHCTC----TTS------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc--cccccCCCCCHHHHHHHHHHhhhhhc----cCCcCC---HHHHHHHH
Confidence 344566666777777775 34444448999999999999988643 333333 77877763
No 138
>PF11287 DUF3088: Protein of unknown function (DUF3088); InterPro: IPR021439 This family of proteins with unknown function appears to be restricted to Proteobacteria.
Probab=93.18 E-value=0.34 Score=30.80 Aligned_cols=51 Identities=20% Similarity=0.309 Sum_probs=36.1
Q ss_pred CCceEecCCCCCchhhhhcC--CCCCCceEEeC-C-------------eeecchHHHHHHHHhhCCC
Q 040329 16 PYDMKLVDLGNKPEWFLKIS--PEGKVPVIKLD-E-------------KWLPDSDVITQSLEEKYPD 66 (164)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~--p~~~~P~L~~~-~-------------~~i~es~aI~~yL~~~~~~ 66 (164)
..+.+.|+......+..+.- ....+|+|+.+ | ..|+++..|++||+++|+-
T Consensus 43 ~ldV~rV~f~RPR~~vi~llGE~~QslPvLVL~~~~~~~~~~~~~~~~rfi~d~~~I~~~La~r~g~ 109 (112)
T PF11287_consen 43 RLDVRRVDFPRPRQAVIALLGEANQSLPVLVLADGAPSPDDAGSHGGRRFIDDPRRILRYLAERHGF 109 (112)
T ss_pred cccEEEeCCCCchHHHHHHhChhccCCCEEEeCCCCCCcccccccCCeEEeCCHHHHHHHHHHHcCC
Confidence 34556777765555555432 25789999853 2 2789999999999999984
No 139
>cd02973 TRX_GRX_like Thioredoxin (TRX)-Glutaredoxin (GRX)-like family; composed of archaeal and bacterial proteins that show similarity to both TRX and GRX, including the C-terminal TRX-fold subdomain of Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). All members contain a redox-active CXXC motif and may function as PDOs. The archaeal proteins Mj0307 and Mt807 show structures more similar to GRX, but activities more similar to TRX. Some members of the family are similar to PfPDO in that they contain a second CXXC motif located in a second TRX-fold subdomain at the N-terminus; the superimposable N- and C-terminal TRX subdomains form a compact structure. PfPDO is postulated to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI). The C-terminal CXXC motif of PfPDO is required for its oxidase, reductase and isomerase activities. Also included in the family is the C-terminal TRX-fold subdomain of the N-terminal domain (NTD) of bacteri
Probab=93.10 E-value=0.25 Score=27.97 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=30.2
Q ss_pred ChhHHHHHHHHhc-----CCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeec
Q 040329 1 PFCQRVLLTIEEK-----HLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLP 51 (164)
Q Consensus 1 P~~~~~r~~L~~~-----gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~ 51 (164)
|+|.+++-+|++. ++++..+ |..+. +++.+......+|++..+|+.+.
T Consensus 12 ~~C~~~~~~l~~l~~~~~~i~~~~i--d~~~~-~~l~~~~~i~~vPti~i~~~~~~ 64 (67)
T cd02973 12 PYCPDAVQAANRIAALNPNISAEMI--DAAEF-PDLADEYGVMSVPAIVINGKVEF 64 (67)
T ss_pred CCcHHHHHHHHHHHHhCCceEEEEE--EcccC-HhHHHHcCCcccCEEEECCEEEE
Confidence 6888888888765 4555444 44333 33444444557999998887653
No 140
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=89.17 E-value=0.72 Score=31.75 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhhhcC---CcccCCC-CCcchhhhhhhhHHHH
Q 040329 103 LLNELNSFNDYIKENG---PFIIGGK-VSAADLSLGPKFYHLE 141 (164)
Q Consensus 103 ~~~~l~~le~~L~~~~---~~l~G~~-~t~aD~~l~~~l~~~~ 141 (164)
-.+++..+++.|+ +. .|+.|+. +|-.||.+++.|..+.
T Consensus 113 a~~~l~~L~~~L~-~~~~~~~~f~~~~psslD~L~~ayL~l~l 154 (168)
T PF11801_consen 113 AMECLSLLEELLG-EWEEARYFFGDSKPSSLDCLAFAYLALLL 154 (168)
T ss_pred HHHHHHHHHHHHh-hccccccccCCCCCCHHHHHHHHHHHHHh
Confidence 4567888999996 45 7888877 9999999999987654
No 141
>PF09635 MetRS-N: MetRS-N binding domain; InterPro: IPR018285 This entry represents the N-terminal domain of methionyl-tRNA synthetase (MetRS). This N-terminal appended domain mediates non-catalytic complex formation through its interaction with a domain in the tRNA aminoacylation cofactor Arc1p. The interacting domains of MetRS, GluRS (glutamyl-tRNA synthetase) and Arc1p form a ternary complex resembling a classical GST homo-dimer []. Domain-swapping between symmetrically related MetRS-N and Arc1p-N domains generates a 2:2 tetramer held together by van der Waals forces. This domain is necessary for formation of the aminoacyl-tRNA synthetase complex necessary for tRNA nuclear export and shuttling as part of the translational apparatus. ; PDB: 2HSN_A.
Probab=89.00 E-value=0.4 Score=30.99 Aligned_cols=29 Identities=17% Similarity=0.218 Sum_probs=13.8
Q ss_pred CCCceEEe--CCeeecchHHHHHHHHhhCCC
Q 040329 38 GKVPVIKL--DEKWLPDSDVITQSLEEKYPD 66 (164)
Q Consensus 38 ~~~P~L~~--~~~~i~es~aI~~yL~~~~~~ 66 (164)
..-|-|.+ +|+.++|++||++|+..-|.+
T Consensus 34 ~~~~~L~~~~~gF~L~e~NAIvrYl~nDF~~ 64 (122)
T PF09635_consen 34 ESGPLLKDKKSGFELFEPNAIVRYLANDFEG 64 (122)
T ss_dssp --S--EEE-S--S----HHHHHHHHTT--TT
T ss_pred cccceeeecCCceEEecccHHHHHHHhhcCC
Confidence 34588854 679999999999999887653
No 142
>cd03036 ArsC_like Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.
Probab=86.98 E-value=0.75 Score=29.26 Aligned_cols=25 Identities=12% Similarity=0.179 Sum_probs=21.8
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG 25 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~ 25 (164)
|+|++++-+|++.|++|+.+.+.-.
T Consensus 10 ~~c~ka~~~L~~~~i~~~~idi~~~ 34 (111)
T cd03036 10 STCRKAKKWLDEHGVDYTAIDIVEE 34 (111)
T ss_pred HHHHHHHHHHHHcCCceEEecccCC
Confidence 6899999999999999988877543
No 143
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=86.03 E-value=1.1 Score=27.96 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=21.4
Q ss_pred ChhHHHHHHHHhcCCCCceEecCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDL 24 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~ 24 (164)
|+|++++-+|.+.|++|+.+.+.-
T Consensus 10 ~~c~ka~~~L~~~~i~~~~idi~~ 33 (105)
T cd02977 10 STSRKALAWLEEHGIEYEFIDYLK 33 (105)
T ss_pred HHHHHHHHHHHHcCCCcEEEeecc
Confidence 689999999999999999888753
No 144
>cd01659 TRX_superfamily Thioredoxin (TRX) superfamily; a large, diverse group of proteins containing a TRX-fold. Many members contain a classic TRX domain with a redox active CXXC motif. They function as protein disulfide oxidoreductases (PDOs), altering the redox state of target proteins via the reversible oxidation of their active site dithiol. The PDO members of this superfamily include TRX, protein disulfide isomerase (PDI), tlpA-like, glutaredoxin, NrdH redoxin, and the bacterial Dsb (DsbA, DsbC, DsbG, DsbE, DsbDgamma) protein families. Members of the superfamily that do not function as PDOs but contain a TRX-fold domain include phosducins, peroxiredoxins and glutathione (GSH) peroxidases, SCO proteins, GSH transferases (GST, N-terminal domain), arsenic reductases, TRX-like ferredoxins and calsequestrin, among others.
Probab=83.80 E-value=1.8 Score=22.90 Aligned_cols=43 Identities=28% Similarity=0.500 Sum_probs=26.1
Q ss_pred ChhHHHHHHHH-----hcCCCCceEecCCCCCchhhh--hcCCCCCCceEEe
Q 040329 1 PFCQRVLLTIE-----EKHLPYDMKLVDLGNKPEWFL--KISPEGKVPVIKL 45 (164)
Q Consensus 1 P~~~~~r~~L~-----~~gi~~~~~~~~~~~~~~~~~--~~~p~~~~P~L~~ 45 (164)
|+|++.+..+. ..++.+ ..++......... ..++...+|+++.
T Consensus 10 ~~c~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 59 (69)
T cd01659 10 PFCQALRPVLAELALLNKGVKF--EAVDVDEDPALEKELKRYGVGGVPTLVV 59 (69)
T ss_pred hhHHhhhhHHHHHHhhCCCcEE--EEEEcCCChHHhhHHHhCCCccccEEEE
Confidence 57888888887 345555 4444443333222 3567789998874
No 145
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=83.02 E-value=6 Score=23.07 Aligned_cols=46 Identities=17% Similarity=0.229 Sum_probs=30.1
Q ss_pred ChhHHH----HHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeee
Q 040329 1 PFCQRV----LLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWL 50 (164)
Q Consensus 1 P~~~~~----r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i 50 (164)
|.|..+ .-++++.|++++.+.+| + ..+..+. -...+|++..||..+
T Consensus 11 ~~C~~~~~~~~~~~~e~~~~~~~~~v~--~-~~~a~~~-~v~~vPti~i~G~~~ 60 (76)
T TIGR00412 11 ANCQMTEKNVKKAVEELGIDAEFEKVT--D-MNEILEA-GVTATPGVAVDGELV 60 (76)
T ss_pred cCHHHHHHHHHHHHHHcCCCeEEEEeC--C-HHHHHHc-CCCcCCEEEECCEEE
Confidence 445555 45677888888888887 1 2223333 356899999888655
No 146
>PRK01655 spxA transcriptional regulator Spx; Reviewed
Probab=81.58 E-value=1.8 Score=28.38 Aligned_cols=24 Identities=17% Similarity=0.376 Sum_probs=21.2
Q ss_pred ChhHHHHHHHHhcCCCCceEecCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDL 24 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~ 24 (164)
|+|++++-+|...||+|+.+.+.-
T Consensus 11 ~~C~ka~~~L~~~gi~~~~idi~~ 34 (131)
T PRK01655 11 TSCRKAKAWLEEHDIPFTERNIFS 34 (131)
T ss_pred hHHHHHHHHHHHcCCCcEEeeccC
Confidence 689999999999999998887753
No 147
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=78.85 E-value=2.6 Score=26.87 Aligned_cols=23 Identities=17% Similarity=0.453 Sum_probs=20.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|+|++++-+|++.|++|+.+.+.
T Consensus 11 ~~c~ka~~~L~~~gi~~~~idi~ 33 (115)
T cd03032 11 SSCRKAKQWLEEHQIPFEERNLF 33 (115)
T ss_pred HHHHHHHHHHHHCCCceEEEecC
Confidence 67999999999999999888775
No 148
>TIGR01617 arsC_related transcriptional regulator, Spx/MgsR family. This model represents a portion of the proteins within the larger set covered by Pfam model pfam03960. That larger family includes a glutaredoxin-dependent arsenate reductase (TIGR00014). Characterized members of this family include Spx and MgsR from Bacillus subtili. Spx is a global regulator for response to thiol-specific oxidative stress. It interacts with RNA polymerase. MgsR (modulator of the general stress response, also called YqgZ) provides a second level of regulation for more than a third of the proteins in the B. subtilis general stress regulon controlled by Sigma-B.
Probab=77.95 E-value=2.3 Score=27.22 Aligned_cols=23 Identities=13% Similarity=0.310 Sum_probs=20.6
Q ss_pred ChhHHHHHHHHhcCCCCceEecC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|+|++++-+|.+.|++|+.+.+.
T Consensus 10 ~~c~ka~~~L~~~~i~~~~idi~ 32 (117)
T TIGR01617 10 TTCKKARRWLEANGIEYQFIDIG 32 (117)
T ss_pred HHHHHHHHHHHHcCCceEEEecC
Confidence 68999999999999999888765
No 149
>PF13192 Thioredoxin_3: Thioredoxin domain; PDB: 1ZYP_B 1ZYN_A 1HYU_A 1ILO_A 1J08_F 2YWM_B 2AYT_B 2HLS_B 1A8L_A 2K8S_B ....
Probab=75.66 E-value=8.1 Score=22.45 Aligned_cols=49 Identities=16% Similarity=0.233 Sum_probs=28.5
Q ss_pred ChhHHHHH----HHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeecch
Q 040329 1 PFCQRVLL----TIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLPDS 53 (164)
Q Consensus 1 P~~~~~r~----~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~es 53 (164)
|+|.++.- ++...|+.++.+.+ ...++. .......+|++..||...+..
T Consensus 11 ~~C~~~~~~~~~~~~~~~i~~ei~~~---~~~~~~-~~ygv~~vPalvIng~~~~~G 63 (76)
T PF13192_consen 11 PYCPELVQLLKEAAEELGIEVEIIDI---EDFEEI-EKYGVMSVPALVINGKVVFVG 63 (76)
T ss_dssp TTHHHHHHHHHHHHHHTTEEEEEEET---TTHHHH-HHTT-SSSSEEEETTEEEEES
T ss_pred CCcHHHHHHHHHHHHhcCCeEEEEEc---cCHHHH-HHcCCCCCCEEEECCEEEEEe
Confidence 45554444 45566766655544 233444 334467899999998765443
No 150
>PF04908 SH3BGR: SH3-binding, glutamic acid-rich protein; InterPro: IPR006993 This family of proteins, which contains SH3BGRL3, is functionally uncharacterised. SH3BGRL3 is a highly conserved small protein, which is widely expressed and shows a significant similarity to glutaredoxin 1 (GRX1) of Escherichia coli which is predicted to belong to the thioredoxin superfamily. However, SH3BGRL3 lacks both conserved cysteine residues, which characterise the enzymatic active site of GRX. This structural feature raises the possibility that SH3BGRL3 and its homologues could function as endogenous modulators of GRX activity []. ; PDB: 1SJ6_A 1U6T_A 1WRY_A 1T1V_B 1J0F_A 2CT6_A.
Probab=75.04 E-value=5.9 Score=24.75 Aligned_cols=51 Identities=22% Similarity=0.411 Sum_probs=28.4
Q ss_pred hHHHHHHHHhcCCCCceEecCCCCC-chhhhhcC---------CCCCCceEEeCCeeecch
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLGNK-PEWFLKIS---------PEGKVPVIKLDEKWLPDS 53 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~~~-~~~~~~~~---------p~~~~P~L~~~~~~i~es 53 (164)
.+++..+|+.++|+|+.+.+...+. ..+.++.. +....|-+..|+..+.+=
T Consensus 20 q~~v~~iL~a~kI~fe~vDIa~~e~~r~~mr~~~g~~~~~~~~~~~lpPqiF~~~~Y~Gdy 80 (99)
T PF04908_consen 20 QQRVLMILEAKKIPFEEVDIAMDEEARQWMRENAGPEEKDPGNGKPLPPQIFNGDEYCGDY 80 (99)
T ss_dssp HHHHHHHHHHTT--EEEEETTT-HHHHHHHHHHT--CCCS-TSTT--S-EEEETTEEEEEH
T ss_pred HHHHHHHHHHcCCCcEEEeCcCCHHHHHHHHHhccccccCCCCCCCCCCEEEeCCEEEeeH
Confidence 5789999999999998887766431 12233322 233446777677655443
No 151
>PRK12559 transcriptional regulator Spx; Provisional
Probab=74.60 E-value=4.1 Score=26.76 Aligned_cols=25 Identities=20% Similarity=0.336 Sum_probs=21.3
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG 25 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~ 25 (164)
|.|++++-+|.+.|++|+.+.+.-.
T Consensus 11 ~~crkA~~~L~~~gi~~~~~di~~~ 35 (131)
T PRK12559 11 ASCRKAKAWLEENQIDYTEKNIVSN 35 (131)
T ss_pred hHHHHHHHHHHHcCCCeEEEEeeCC
Confidence 5789999999999999998877543
No 152
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=71.89 E-value=5.8 Score=26.09 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=21.3
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG 25 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~ 25 (164)
|.|++++-.|...|++|+.+.+.-.
T Consensus 11 ~~crkA~~~L~~~~i~~~~~d~~~~ 35 (132)
T PRK13344 11 TSCKKAKTWLNAHQLSYKEQNLGKE 35 (132)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCC
Confidence 5789999999999999999887643
No 153
>COG0278 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=68.91 E-value=22 Score=22.35 Aligned_cols=59 Identities=8% Similarity=0.130 Sum_probs=39.0
Q ss_pred hhHHHHHHHHhcC-CCCceEecCCC-CCchhhhhcCCCCCCceEEeCCeeecchHHHHHHH
Q 040329 2 FCQRVLLTIEEKH-LPYDMKLVDLG-NKPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSL 60 (164)
Q Consensus 2 ~~~~~r~~L~~~g-i~~~~~~~~~~-~~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL 60 (164)
||.++--+|...| ++|..+.|=-+ +-...+++.+-..++|=|-.+|..+..|--|.+..
T Consensus 32 FS~~~vqiL~~~g~v~~~~vnVL~d~eiR~~lk~~s~WPT~PQLyi~GEfvGG~DIv~Em~ 92 (105)
T COG0278 32 FSAQAVQILSACGVVDFAYVDVLQDPEIRQGLKEYSNWPTFPQLYVNGEFVGGCDIVREMY 92 (105)
T ss_pred ccHHHHHHHHHcCCcceeEEeeccCHHHHhccHhhcCCCCCceeeECCEEeccHHHHHHHH
Confidence 6788888999999 55544443211 12233445555678998888998888887666554
No 154
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=65.01 E-value=9.6 Score=23.91 Aligned_cols=23 Identities=9% Similarity=0.098 Sum_probs=19.6
Q ss_pred hhHHHHHHHHhcCCCCceEecCC
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDL 24 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~ 24 (164)
.|++++-.|.+.|++|+.+.+.-
T Consensus 11 ~crka~~~L~~~~i~~~~~di~~ 33 (105)
T cd03035 11 TVKKARKWLEARGVAYTFHDYRK 33 (105)
T ss_pred HHHHHHHHHHHcCCCeEEEeccc
Confidence 58899999999999998887653
No 155
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=63.16 E-value=25 Score=20.12 Aligned_cols=47 Identities=17% Similarity=0.295 Sum_probs=28.8
Q ss_pred ChhHHHHHHHHh----cCCCCceEecCCCCCchhhhhcCCCCCCceEEeCCe
Q 040329 1 PFCQRVLLTIEE----KHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEK 48 (164)
Q Consensus 1 P~~~~~r~~L~~----~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~ 48 (164)
|+|..+.-.|+. .+..+....+|..+... ..+......+|++..+|.
T Consensus 12 ~~C~~~~~~l~~l~~~~~~~~~~~~vd~~~~~~-~~~~~~v~~vPt~~~~g~ 62 (82)
T TIGR00411 12 PYCPAAKRVVEEVAKEMGDAVEVEYINVMENPQ-KAMEYGIMAVPAIVINGD 62 (82)
T ss_pred cchHHHHHHHHHHHHHhcCceEEEEEeCccCHH-HHHHcCCccCCEEEECCE
Confidence 566666666543 34446667777655444 334444567999988775
No 156
>KOG2824 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=61.18 E-value=14 Score=27.59 Aligned_cols=56 Identities=13% Similarity=0.246 Sum_probs=41.3
Q ss_pred hHHHHHHHHhcCCCCceEecCCCC-CchhhhhcC----CCCCCceEEeCCeeecchHHHHH
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKIS----PEGKVPVIKLDEKWLPDSDVITQ 58 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~----p~~~~P~L~~~~~~i~es~aI~~ 58 (164)
|..+|.+|+--+|.|+...|.+.. ..++++.+- -.-.+|.+..+|.-|....-|.+
T Consensus 150 C~~VR~ilesf~V~v~ERDVSMd~~fr~EL~~~lg~~~~~~~LPrVFV~GryIGgaeeV~~ 210 (281)
T KOG2824|consen 150 CNAVRAILESFRVKVDERDVSMDSEFREELQELLGEDEKAVSLPRVFVKGRYIGGAEEVVR 210 (281)
T ss_pred HHHHHHHHHhCceEEEEecccccHHHHHHHHHHHhcccccCccCeEEEccEEeccHHHhhh
Confidence 678999999999999999998875 334444332 24578988888887766665554
No 157
>cd03026 AhpF_NTD_C TRX-GRX-like family, Alkyl hydroperoxide reductase F subunit (AhpF) N-terminal domain (NTD) subfamily, C-terminal TRX-fold subdomain; AhpF is a homodimeric flavoenzyme which catalyzes the NADH-dependent reduction of the peroxiredoxin AhpC, which then reduces hydrogen peroxide and organic hydroperoxides. AhpF contains an NTD containing two contiguous TRX-fold subdomains similar to Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO). It also contains a catalytic core similar to TRX reductase containing FAD and NADH binding domains with an active site disulfide. The proposed mechanism of action of AhpF is similar to a TRX/TRX reductase system. The flow of reducing equivalents goes from NADH - catalytic core of AhpF - NTD of AhpF - AhpC - peroxide substrates. The catalytic CXXC motif of the NTD of AhpF is contained in its C-terminal TRX subdomain.
Probab=61.00 E-value=22 Score=21.44 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=26.4
Q ss_pred ChhHHHHHHHHhc-----CCCCceEecCCCCCchhhhhcCCCCCCceEEeCCeeec
Q 040329 1 PFCQRVLLTIEEK-----HLPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDEKWLP 51 (164)
Q Consensus 1 P~~~~~r~~L~~~-----gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~~~i~ 51 (164)
|+|..+.-++.+. ++.+ ..+|..+.++ ......-..+|+++.||..+.
T Consensus 25 ~~C~~~~~~~~~l~~~~~~i~~--~~vd~~~~~e-~a~~~~V~~vPt~vidG~~~~ 77 (89)
T cd03026 25 HNCPDVVQALNLMAVLNPNIEH--EMIDGALFQD-EVEERGIMSVPAIFLNGELFG 77 (89)
T ss_pred CCcHHHHHHHHHHHHHCCCceE--EEEEhHhCHH-HHHHcCCccCCEEEECCEEEE
Confidence 4566665555433 3444 4445444444 333344557999988876543
No 158
>cd03033 ArsC_15kD Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.
Probab=58.54 E-value=15 Score=23.40 Aligned_cols=22 Identities=9% Similarity=-0.067 Sum_probs=18.9
Q ss_pred hhHHHHHHHHhcCCCCceEecC
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~ 23 (164)
-|++++-+|++.|++|+.+.+-
T Consensus 12 ~crkA~~~L~~~gi~~~~~d~~ 33 (113)
T cd03033 12 NNARQKALLEAAGHEVEVRDLL 33 (113)
T ss_pred HHHHHHHHHHHcCCCcEEeehh
Confidence 4789999999999999888764
No 159
>KOG1668 consensus Elongation factor 1 beta/delta chain [Transcription]
Probab=57.20 E-value=12 Score=27.17 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhh
Q 040329 104 LNELNSFNDYIKENGPFIIGGKVSAADLSLGPKF 137 (164)
Q Consensus 104 ~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l 137 (164)
...+..++..|. +++|..|.+++-+|+.++..+
T Consensus 10 ~~glk~l~~sLA-~ks~~~g~~~s~edv~vf~al 42 (231)
T KOG1668|consen 10 PAGLKKLNKSLA-EKSYIEGYQLSKEDVVVFAAL 42 (231)
T ss_pred hhhhhhhhHhhh-cccCCCCCCcccccceeehhc
Confidence 566788999997 789999999999999999777
No 160
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=57.18 E-value=18 Score=23.63 Aligned_cols=21 Identities=5% Similarity=-0.023 Sum_probs=18.2
Q ss_pred hHHHHHHHHhcCCCCceEecC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|+|++-.|++.|++|+.+.+-
T Consensus 14 ~RKA~~~L~~~gi~~~~~d~~ 34 (126)
T TIGR01616 14 NARQKAALKASGHDVEVQDIL 34 (126)
T ss_pred HHHHHHHHHHCCCCcEEEecc
Confidence 688999999999999888764
No 161
>PRK10853 putative reductase; Provisional
Probab=52.19 E-value=16 Score=23.49 Aligned_cols=21 Identities=10% Similarity=0.132 Sum_probs=17.8
Q ss_pred hHHHHHHHHhcCCCCceEecC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|++++-.|++.|++|+.+.+-
T Consensus 13 ~rkA~~~L~~~~i~~~~~d~~ 33 (118)
T PRK10853 13 IKKARRWLEAQGIDYRFHDYR 33 (118)
T ss_pred HHHHHHHHHHcCCCcEEeehc
Confidence 688889999999999887653
No 162
>PRK09266 hypothetical protein; Provisional
Probab=50.39 E-value=22 Score=26.14 Aligned_cols=60 Identities=25% Similarity=0.340 Sum_probs=40.6
Q ss_pred HHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCC
Q 040329 9 TIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPP 68 (164)
Q Consensus 9 ~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~ 68 (164)
.+...|++++...++..+ ..+-|.-.+-.|-+||-..|+..+.....+.+.|.+.|...+
T Consensus 200 ~~~~~g~~v~e~~i~~~eL~~adevfltnSl~gi~pV~~i~~~~~~~~~~~~~~l~~~~~~~~ 262 (266)
T PRK09266 200 GLERLGIPQRTRPVTLADLGRFAGAFACNAWRGQRAVSAIDDVALPDSHALLELLRRAYEAEP 262 (266)
T ss_pred HHHHcCCeeEEEECCHHHHHHhhHhhhhcCccceEEEEEECCEECCCCchHHHHHHHHHHhcC
Confidence 345668998888887654 222234334469999999888887655678787877764433
No 163
>PHA02125 thioredoxin-like protein
Probab=49.69 E-value=34 Score=19.65 Aligned_cols=41 Identities=15% Similarity=0.125 Sum_probs=25.6
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCCCchhhhhcCCCCCCceEEe
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGNKPEWFLKISPEGKVPVIKL 45 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~ 45 (164)
.|+++.-.|+ ++.++...+|.++. .++.+..--..+|++..
T Consensus 12 ~Ck~~~~~l~--~~~~~~~~vd~~~~-~~l~~~~~v~~~PT~~~ 52 (75)
T PHA02125 12 NCKMVKPMLA--NVEYTYVDVDTDEG-VELTAKHHIRSLPTLVN 52 (75)
T ss_pred hHHHHHHHHH--HHhheEEeeeCCCC-HHHHHHcCCceeCeEEC
Confidence 4555555564 45677777776543 34555555678999983
No 164
>COG1393 ArsC Arsenate reductase and related proteins, glutaredoxin family [Inorganic ion transport and metabolism]
Probab=49.29 E-value=30 Score=22.29 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=18.0
Q ss_pred hHHHHHHHHhcCCCCceEecC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|++++-.|++.||+|+.+.+-
T Consensus 14 ~rka~~~L~~~gi~~~~~~y~ 34 (117)
T COG1393 14 CRKALAWLEEHGIEYTFIDYL 34 (117)
T ss_pred HHHHHHHHHHcCCCcEEEEee
Confidence 688999999999999887654
No 165
>PF05768 DUF836: Glutaredoxin-like domain (DUF836); InterPro: IPR008554 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. This family contains several viral glutaredoxins, and many related bacterial and eukaryotic proteins of unknown function. The best characterised member of this family is G4L (P68460 from SWISSPROT) from Vaccinia virus (strain Western Reserve/WR) (VACV), which is necessary for virion morphogenesis and virus replication []. This is a cytomplasmic protein which functions as a shuttle in a redox pathway between membrane-associated E10R and L1R or F9L []. ; PDB: 1TTZ_A 1XPV_A 2FGX_A 2G2Q_C 1WJK_A.
Probab=48.35 E-value=55 Score=19.16 Aligned_cols=44 Identities=25% Similarity=0.619 Sum_probs=28.9
Q ss_pred hhHHHHHHHHhcC--CCCceEecCCCCCchhhhhcCCCCCCceEEeCC
Q 040329 2 FCQRVLLTIEEKH--LPYDMKLVDLGNKPEWFLKISPEGKVPVIKLDE 47 (164)
Q Consensus 2 ~~~~~r~~L~~~g--i~~~~~~~~~~~~~~~~~~~~p~~~~P~L~~~~ 47 (164)
.|..+.-.|.... .+++...+|..+.+. +....- -.+|||..+|
T Consensus 12 LC~~a~~~L~~~~~~~~~~l~~vDI~~d~~-l~~~Y~-~~IPVl~~~~ 57 (81)
T PF05768_consen 12 LCDEAKEILEEVAAEFPFELEEVDIDEDPE-LFEKYG-YRIPVLHIDG 57 (81)
T ss_dssp HHHHHHHHHHHCCTTSTCEEEEEETTTTHH-HHHHSC-TSTSEEEETT
T ss_pred hHHHHHHHHHHHHhhcCceEEEEECCCCHH-HHHHhc-CCCCEEEEcC
Confidence 3666777777543 456777788775544 444442 4899999877
No 166
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=46.74 E-value=18 Score=22.69 Aligned_cols=21 Identities=24% Similarity=0.498 Sum_probs=16.0
Q ss_pred hHHHHHHHHhcCCCCceEecC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|++++-.|++.|++|+.+.+.
T Consensus 9 ~rka~~~L~~~gi~~~~~d~~ 29 (110)
T PF03960_consen 9 CRKALKWLEENGIEYEFIDYK 29 (110)
T ss_dssp HHHHHHHHHHTT--EEEEETT
T ss_pred HHHHHHHHHHcCCCeEeehhh
Confidence 788999999999999887664
No 167
>PRK10026 arsenate reductase; Provisional
Probab=43.40 E-value=37 Score=22.67 Aligned_cols=21 Identities=10% Similarity=-0.077 Sum_probs=18.0
Q ss_pred hHHHHHHHHhcCCCCceEecC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|++++-.|.+.|++|+.+.+-
T Consensus 15 ~RKA~~wL~~~gi~~~~~d~~ 35 (141)
T PRK10026 15 SRNTLEMIRNSGTEPTIIHYL 35 (141)
T ss_pred HHHHHHHHHHCCCCcEEEeee
Confidence 688889999999999888764
No 168
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=42.41 E-value=25 Score=20.78 Aligned_cols=22 Identities=18% Similarity=0.434 Sum_probs=18.7
Q ss_pred hhHHHHHHHHhcCCCCceEecC
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|++|+.-+|+..|++|+..+-.
T Consensus 17 F~rk~L~I~E~~~is~Eh~PSG 38 (76)
T cd04911 17 FGRKLLSILEDNGISYEHMPSG 38 (76)
T ss_pred HHHHHHHHHHHcCCCEeeecCC
Confidence 6789999999999999888543
No 169
>TIGR02681 phage_pRha phage regulatory protein, rha family. Members of this protein family are found in temperate phage and bacterial prophage regions. Members include the product of the rha gene of the lambdoid phage phi-80, a late operon gene. The presence of this gene interferes with infection of bacterial strains that lack integration host factor (IHF), which regulates the rha gene. It is suggested that pRha is a phage regulatory protein.
Probab=42.39 E-value=27 Score=22.14 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=20.6
Q ss_pred CceE-EeCCeeecchHHHHHHHHhhCC
Q 040329 40 VPVI-KLDEKWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 40 ~P~L-~~~~~~i~es~aI~~yL~~~~~ 65 (164)
.|.+ ..+|.+++.|..|+++...+|.
T Consensus 2 ~~~v~~~~~~~~ttS~~IAe~fgK~H~ 28 (108)
T TIGR02681 2 FPKVFTKRNQVVTDSLTMAQMFGKRHD 28 (108)
T ss_pred CceEEEECCEEEEeHHHHHHHHCcchH
Confidence 3544 4689999999999999887654
No 170
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=42.12 E-value=29 Score=21.96 Aligned_cols=21 Identities=14% Similarity=0.105 Sum_probs=17.6
Q ss_pred hHHHHHHHHhcCCCCceEecC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|++++-.|++.|++|+.+.+-
T Consensus 12 ~rkA~~~L~~~~i~~~~~di~ 32 (112)
T cd03034 12 SRNALALLEEAGIEPEIVEYL 32 (112)
T ss_pred HHHHHHHHHHCCCCeEEEecc
Confidence 688888999999999887653
No 171
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=41.11 E-value=43 Score=21.24 Aligned_cols=21 Identities=14% Similarity=0.143 Sum_probs=17.8
Q ss_pred hHHHHHHHHhcCCCCceEecC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVD 23 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~ 23 (164)
|++++-.|++.|++|+.+.+-
T Consensus 12 ~rkA~~~L~~~~i~~~~~di~ 32 (114)
T TIGR00014 12 SRNTLALLEDKGIEPEVVKYL 32 (114)
T ss_pred HHHHHHHHHHCCCCeEEEecc
Confidence 788899999999999887654
No 172
>TIGR01764 excise DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376).
Probab=35.32 E-value=64 Score=16.15 Aligned_cols=25 Identities=20% Similarity=0.461 Sum_probs=20.3
Q ss_pred CCCCceEEeCCeeecchHHHHHHHH
Q 040329 37 EGKVPVIKLDEKWLPDSDVITQSLE 61 (164)
Q Consensus 37 ~~~~P~L~~~~~~i~es~aI~~yL~ 61 (164)
.|.+|....++........|.+|+.
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~ 48 (49)
T TIGR01764 24 EGELPAYRVGRHYRIPREDVDEYLE 48 (49)
T ss_pred cCCCCeEEeCCeEEEeHHHHHHHHh
Confidence 5788988778888888888888875
No 173
>PF08159 NUC153: NUC153 domain; InterPro: IPR012580 This small domain is found in a novel nucleolar family [].; GO: 0005634 nucleus
Probab=32.42 E-value=37 Score=16.17 Aligned_cols=21 Identities=10% Similarity=0.064 Sum_probs=13.2
Q ss_pred ceEecCCCCCchhhhhcCCCC
Q 040329 18 DMKLVDLGNKPEWFLKISPEG 38 (164)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~p~~ 38 (164)
+.....+....++|+.++|..
T Consensus 9 ~~~dF~ID~t~~~yk~~~~~~ 29 (30)
T PF08159_consen 9 EDPDFAIDPTSPEYKKTNPME 29 (30)
T ss_pred CCcccccCCCCHHHHhhCccc
Confidence 333444445667899888864
No 174
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=29.97 E-value=50 Score=23.15 Aligned_cols=18 Identities=28% Similarity=0.532 Sum_probs=17.0
Q ss_pred eeecchHHHHHHHHhhCC
Q 040329 48 KWLPDSDVITQSLEEKYP 65 (164)
Q Consensus 48 ~~i~es~aI~~yL~~~~~ 65 (164)
..|++|..|-+|+.++|+
T Consensus 156 ~lIaDs~~I~~y~~~~y~ 173 (185)
T PF09314_consen 156 RLIADSKGIQDYIKERYG 173 (185)
T ss_pred EEEEcCHHHHHHHHHHcC
Confidence 589999999999999998
No 175
>KOG0911 consensus Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=29.47 E-value=1.7e+02 Score=21.29 Aligned_cols=58 Identities=10% Similarity=0.198 Sum_probs=40.8
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCC-CchhhhhcCCCCCCceEEeCCeeecchHHHHHH
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGN-KPEWFLKISPEGKVPVIKLDEKWLPDSDVITQS 59 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~-~~~~~~~~~p~~~~P~L~~~~~~i~es~aI~~y 59 (164)
|++++.-.|...|++|....|-.++ -..-+++.+-..+.|=|-.+|.-+...--|...
T Consensus 156 FS~~~v~iL~~~nV~~~~fdIL~DeelRqglK~fSdWPTfPQlyI~GEFiGGlDIl~~m 214 (227)
T KOG0911|consen 156 FSRQLVGILQSHNVNYTIFDVLTDEELRQGLKEFSDWPTFPQLYVKGEFIGGLDILKEM 214 (227)
T ss_pred ccHHHHHHHHHcCCCeeEEeccCCHHHHHHhhhhcCCCCccceeECCEeccCcHHHHHH
Confidence 6788889999999998777664332 223355666678899888888777665544433
No 176
>PRK15371 effector protein YopJ; Provisional
Probab=28.32 E-value=1.2e+02 Score=22.96 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHH
Q 040329 98 GSEQALLNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLE 141 (164)
Q Consensus 98 ~~~~~~~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~ 141 (164)
...+.+..+++.||+.++ .|.|+ -+..+..|+-+.+.|....
T Consensus 23 ~~~~~L~~~i~~le~~~~-~G~~~-~~~~~~~Di~~lp~lv~~~ 64 (287)
T PRK15371 23 ISNEELKNIITQLEDDIA-DGSWI-HKNYARTDLEVMPALVAQA 64 (287)
T ss_pred hhHHHHHHHHHHHHHHHH-cCCCC-CchhHHhhHHhhHHHHHHH
Confidence 456779999999999997 56777 4458999999999986665
No 177
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=27.34 E-value=92 Score=19.18 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=38.2
Q ss_pred hHHHHHHHHhcCCCCceEecCCCCCchhhhh-cCCCCCCceEEeCCeeecchHHHHHHHHhhCCCCC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLGNKPEWFLK-ISPEGKVPVIKLDEKWLPDSDVITQSLEEKYPDPP 68 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~~~~~~~~~-~~p~~~~P~L~~~~~~i~es~aI~~yL~~~~~~~~ 68 (164)
+....-.|+..|.++-...=+....+.++.+ +.-.| ++ +..+.+++-..++.+||.++.+...
T Consensus 19 a~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G-i~--~~~~~i~ts~~~~~~~l~~~~~~~~ 82 (101)
T PF13344_consen 19 AVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG-IP--VDEDEIITSGMAAAEYLKEHKGGKK 82 (101)
T ss_dssp HHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT-TT----GGGEEEHHHHHHHHHHHHTTSSE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC-cC--CCcCEEEChHHHHHHHHHhcCCCCE
Confidence 4445556788888887765554444344433 22233 44 3447888999999999999765443
No 178
>PF12728 HTH_17: Helix-turn-helix domain
Probab=26.79 E-value=1e+02 Score=15.92 Aligned_cols=27 Identities=30% Similarity=0.608 Sum_probs=22.2
Q ss_pred CCCCceEEeCCeeecchHHHHHHHHhh
Q 040329 37 EGKVPVIKLDEKWLPDSDVITQSLEEK 63 (164)
Q Consensus 37 ~~~~P~L~~~~~~i~es~aI~~yL~~~ 63 (164)
.|.+|....++.....-..|.+|+.++
T Consensus 24 ~g~i~~~~~g~~~~~~~~~l~~~~~~~ 50 (51)
T PF12728_consen 24 QGKIPPFKIGRKWRIPKSDLDRWLERR 50 (51)
T ss_pred cCCCCeEEeCCEEEEeHHHHHHHHHhC
Confidence 578888887788888889999998763
No 179
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.50 E-value=2.1e+02 Score=22.51 Aligned_cols=101 Identities=10% Similarity=-0.027 Sum_probs=61.2
Q ss_pred CceEEeCCeeecchHHHHHHHHhhCCC-CCCCCChHHHhhhhhhHH-----------HHHh----hhcCCCCCchHHHHH
Q 040329 40 VPVIKLDEKWLPDSDVITQSLEEKYPD-PPLRTPPEKASVGSKIFS-----------MFIG----FLKSKDPSDGSEQAL 103 (164)
Q Consensus 40 ~P~L~~~~~~i~es~aI~~yL~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~~~ 103 (164)
.+.+.+.+..+.|+.+|..-|...-.. ..-++..++.++..|+.. .++. .+....-.+.-...+
T Consensus 98 w~~~~~~dQ~~VEaa~la~aL~~a~~~lW~~L~~~~k~~l~~wL~~~~~~~~~~nNW~lF~v~v~~~L~~~G~~~d~~~i 177 (361)
T PF10022_consen 98 WGFIGDYDQRLVEAASLALALLRAPEWLWDPLDEEEKENLVDWLKQIRGIKPPDNNWLLFRVMVEAFLKKVGEEYDEERI 177 (361)
T ss_pred cCCcccchhhHhHHHHHHHHHHHCHHHHHhhCCHHHHHHHHHHHHhcCcCCCccchhHHHHHHHHHHHHHcCCCCcHHHH
Confidence 444455568999999999888764221 122467788888887642 1111 111111222224677
Q ss_pred HHHHHHHHHhhhhcCCcccCCCCCcchhhhhhhhHHHH
Q 040329 104 LNELNSFNDYIKENGPFIIGGKVSAADLSLGPKFYHLE 141 (164)
Q Consensus 104 ~~~l~~le~~L~~~~~~l~G~~~t~aD~~l~~~l~~~~ 141 (164)
...++.+|+.-. |..|+....-.-.|.+..-.++...
T Consensus 178 ~~~l~~~e~~Y~-GdGWY~DG~~~~~DYYns~aih~y~ 214 (361)
T PF10022_consen 178 DYDLERIEEWYL-GDGWYSDGPEFQFDYYNSWAIHPYL 214 (361)
T ss_pred HHHHHHHHHHhc-cCCccccCCccCCcchHHHHHHHHH
Confidence 888888998876 4457775556678888855554443
No 180
>PHA02776 E7 protein; Provisional
Probab=24.12 E-value=32 Score=21.60 Aligned_cols=13 Identities=23% Similarity=0.386 Sum_probs=11.5
Q ss_pred ccCCCCCcchhhh
Q 040329 121 IIGGKVSAADLSL 133 (164)
Q Consensus 121 l~G~~~t~aD~~l 133 (164)
+.|.++|+.||.+
T Consensus 1 M~G~~pTl~DIvL 13 (101)
T PHA02776 1 MHGKHPTLKDIVL 13 (101)
T ss_pred CCCCCCcHhHeee
Confidence 4699999999998
No 181
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=24.03 E-value=62 Score=21.89 Aligned_cols=24 Identities=25% Similarity=0.587 Sum_probs=18.1
Q ss_pred ChhHHHHHHHHhcCCCCceEecCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDL 24 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~ 24 (164)
|.+++++-.|++.|++|+......
T Consensus 14 ~~~~~a~~~L~~~gi~~~~~V~sa 37 (150)
T PF00731_consen 14 PIAEEAAKTLEEFGIPYEVRVASA 37 (150)
T ss_dssp HHHHHHHHHHHHTT-EEEEEE--T
T ss_pred HHHHHHHHHHHHcCCCEEEEEEec
Confidence 467899999999999999876664
No 182
>COG2176 PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair]
Probab=23.86 E-value=3.8e+02 Score=25.08 Aligned_cols=92 Identities=13% Similarity=0.175 Sum_probs=55.1
Q ss_pred eeecchHHHHHHHHhhCC-CCCCCCC-h--HHHhhhhhhHHHHHhhhcCCCCC---chHHHHHHHHH-------HHHHHh
Q 040329 48 KWLPDSDVITQSLEEKYP-DPPLRTP-P--EKASVGSKIFSMFIGFLKSKDPS---DGSEQALLNEL-------NSFNDY 113 (164)
Q Consensus 48 ~~i~es~aI~~yL~~~~~-~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l-------~~le~~ 113 (164)
.++..++.|...+++-.| +..+++| . ....+....+......+.++-+. .+.++.+..++ -.+.+.
T Consensus 797 iVv~Ntn~iad~ie~i~Pik~~LytPkie~a~e~v~~lty~~A~~iYG~pLP~IVe~RiEKEL~sII~nGFaViYlISq~ 876 (1444)
T COG2176 797 IVVENTNKIADMIEDIQPIKDKLYTPKIEGAEEKVRDLTYEKAHKIYGDPLPEIVEQRIEKELNSIIGNGFAVIYLISQK 876 (1444)
T ss_pred HhhcCcHHHHHHhhcceecccCCCCCccCCHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHcCCeeehhHHHHH
Confidence 478999999999999766 4556553 2 23334444444444444444331 33444455443 234444
Q ss_pred hhh---cCCcccCCCCCcchhhhhhhhHH
Q 040329 114 IKE---NGPFIIGGKVSAADLSLGPKFYH 139 (164)
Q Consensus 114 L~~---~~~~l~G~~~t~aD~~l~~~l~~ 139 (164)
|.+ ...|++|++-|+.-=.++.++.-
T Consensus 877 LVkkS~~dGYlVGSRGSVGSSlVAtm~gI 905 (1444)
T COG2176 877 LVKKSLDDGYLVGSRGSVGSSLVATMIGI 905 (1444)
T ss_pred HHHhhccCCeEecCCCcchHHHHHHhhcc
Confidence 542 34699999999998887766643
No 183
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=23.17 E-value=1e+02 Score=21.01 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=21.0
Q ss_pred ChhHHHHHHHHhcCCCCceEecCCC
Q 040329 1 PFCQRVLLTIEEKHLPYDMKLVDLG 25 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~~~~~~ 25 (164)
|.++++...|+..|++|+......-
T Consensus 12 ~~~~~a~~~L~~~gi~~dv~V~SaH 36 (156)
T TIGR01162 12 PTMKKAADILEEFGIPYELRVVSAH 36 (156)
T ss_pred HHHHHHHHHHHHcCCCeEEEEECcc
Confidence 4678899999999999999877653
No 184
>COG4545 Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=22.61 E-value=1.8e+02 Score=17.29 Aligned_cols=50 Identities=16% Similarity=0.181 Sum_probs=29.7
Q ss_pred hhHHHHHHHHhcCCCCceEecCCC-----------CCchhhhhc--CCCCCCceEE-eCCeeec
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLG-----------NKPEWFLKI--SPEGKVPVIK-LDEKWLP 51 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~-----------~~~~~~~~~--~p~~~~P~L~-~~~~~i~ 51 (164)
-|....-.|+-.++.|+.+.+... +..++|-+. |.+--+|.|. +||.++.
T Consensus 14 dca~a~eyl~rl~v~yd~VeIt~Sm~NlKrFl~lRDs~~~Fd~vk~~gyiGIPall~~d~~vVl 77 (85)
T COG4545 14 DCAPAVEYLERLNVDYDFVEITESMANLKRFLHLRDSRPEFDEVKSNGYIGIPALLTDDGKVVL 77 (85)
T ss_pred chHHHHHHHHHcCCCceeeehhhhhhhHHHHHhhhccchhHHhhhhcCcccceEEEeCCCcEEE
Confidence 345556678888999999887532 123333332 3344578886 4555543
No 185
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=21.56 E-value=83 Score=22.76 Aligned_cols=54 Identities=20% Similarity=0.300 Sum_probs=33.8
Q ss_pred HHHhcCCCCceEecCCCC---CchhhhhcCCCCCCceEEeCCeee--cchHHHHHHHHh
Q 040329 9 TIEEKHLPYDMKLVDLGN---KPEWFLKISPEGKVPVIKLDEKWL--PDSDVITQSLEE 62 (164)
Q Consensus 9 ~L~~~gi~~~~~~~~~~~---~~~~~~~~~p~~~~P~L~~~~~~i--~es~aI~~yL~~ 62 (164)
.++..|++++...+...+ ..+-|.-.+..|-+|+-..++..+ .....+.+.|.+
T Consensus 196 ~~~~~g~~v~e~~i~~~dL~~adevfl~ns~~gv~pV~~i~~~~~~~~~~~~~~~~l~~ 254 (256)
T cd00449 196 LAKELGIKVEERPISLDELYAADEVFLTGTAAEVTPVTEIDGRGIGDGKPGPVTRKLRE 254 (256)
T ss_pred HHHHcCCeEEEEecCHHHHhhCCEEEEccccceEEEEEEECCeecCCCCCCHHHHHHHH
Confidence 456778888888776543 222233334468899998887766 344556665544
No 186
>PF15643 Tox-PL-2: Papain fold toxin 2
Probab=21.55 E-value=1.6e+02 Score=18.41 Aligned_cols=30 Identities=10% Similarity=0.095 Sum_probs=23.4
Q ss_pred hhHHHHHHHHhcCCCCceEecCCCCCchhh
Q 040329 2 FCQRVLLTIEEKHLPYDMKLVDLGNKPEWF 31 (164)
Q Consensus 2 ~~~~~r~~L~~~gi~~~~~~~~~~~~~~~~ 31 (164)
++..++-.|...||+.+.+.+........|
T Consensus 24 cA~Al~~~L~~~gI~Gk~i~l~T~~~~~~~ 53 (100)
T PF15643_consen 24 CASALKQFLKQAGIPGKIIRLYTGYHEGPF 53 (100)
T ss_pred HHHHHHHHHHHCCCCceEEEEEecCCCCce
Confidence 567788889999999999998875444444
No 187
>PF06603 UpxZ: UpxZ family of transcription anti-terminator antagonists; InterPro: IPR010570 This family consists of several hypothetical proteins of unknown function and seems to be specific to Bacteroides species.
Probab=21.40 E-value=2.3e+02 Score=17.95 Aligned_cols=59 Identities=5% Similarity=0.066 Sum_probs=29.0
Q ss_pred HHHHHHhhCCCCCCCCChHHHhhhhhhHHHHHhhhcCCCCCchHHHHHHHHHHHHHHhh
Q 040329 56 ITQSLEEKYPDPPLRTPPEKASVGSKIFSMFIGFLKSKDPSDGSEQALLNELNSFNDYI 114 (164)
Q Consensus 56 I~~yL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~le~~L 114 (164)
|.+-....|+..+-.+.++...-...+...-..++.++++.+.....+.+.+..+++.-
T Consensus 34 v~~~~~~Ly~~~G~t~EeeA~lCLaLLmGYnat~yd~geke~~~Q~vL~Rs~~vL~~Lp 92 (106)
T PF06603_consen 34 VYEQSNDLYSQHGSTPEEEANLCLALLMGYNATIYDNGEKEEKKQEVLDRSWEVLDKLP 92 (106)
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHHHHhccchhhhCccHHHHHHHHHHHHHHHHHhCC
Confidence 33444445554442333333322333333323344455556666677777777777653
No 188
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=21.27 E-value=1.6e+02 Score=18.31 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=18.3
Q ss_pred hHHHHHHHHhcCCCCceEecCCC
Q 040329 3 CQRVLLTIEEKHLPYDMKLVDLG 25 (164)
Q Consensus 3 ~~~~r~~L~~~gi~~~~~~~~~~ 25 (164)
+.|++-++++.|++++...+...
T Consensus 17 a~km~~~a~~~gi~~~i~a~~~~ 39 (99)
T cd05565 17 ANALNKGAKERGVPLEAAAGAYG 39 (99)
T ss_pred HHHHHHHHHHCCCcEEEEEeeHH
Confidence 56888899999999987766543
No 189
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=20.72 E-value=97 Score=19.43 Aligned_cols=20 Identities=35% Similarity=0.487 Sum_probs=16.1
Q ss_pred ChhHHHHHHHHhcCCCCceE
Q 040329 1 PFCQRVLLTIEEKHLPYDMK 20 (164)
Q Consensus 1 P~~~~~r~~L~~~gi~~~~~ 20 (164)
|....++.+.+++||+++..
T Consensus 67 pd~~Hl~~LA~ekgVpVe~~ 86 (100)
T PF15608_consen 67 PDLAHLLLLAEEKGVPVEVY 86 (100)
T ss_pred ccHHHHHHHHHHcCCcEEEe
Confidence 45667888899999998766
Done!