Query 040333
Match_columns 513
No_of_seqs 449 out of 3726
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 07:26:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040333.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040333hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK11498 bcsA cellulose syntha 100.0 9.9E-43 2.1E-47 377.2 45.6 336 80-436 256-613 (852)
2 TIGR03030 CelA cellulose synth 100.0 1.8E-42 3.9E-47 378.3 45.4 339 80-435 127-501 (713)
3 PRK14583 hmsR N-glycosyltransf 100.0 1.3E-41 2.9E-46 354.9 43.3 235 81-323 72-314 (444)
4 PRK11204 N-glycosyltransferase 100.0 2.1E-41 4.5E-46 352.4 42.7 237 80-324 50-294 (420)
5 PRK05454 glucosyltransferase M 100.0 1.7E-37 3.8E-42 332.6 45.9 372 80-481 120-558 (691)
6 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 3.1E-37 6.7E-42 321.1 40.9 233 80-318 45-295 (439)
7 cd06437 CESA_CaSu_A2 Cellulose 100.0 1.1E-37 2.4E-42 298.1 24.8 224 84-309 1-232 (232)
8 PRK14716 bacteriophage N4 adso 100.0 1E-35 2.2E-40 308.7 37.3 231 80-319 62-334 (504)
9 COG1215 Glycosyltransferases, 100.0 4.3E-34 9.2E-39 299.4 31.1 228 83-316 53-291 (439)
10 PRK11234 nfrB bacteriophage N4 100.0 6E-33 1.3E-37 299.2 34.8 231 79-318 58-338 (727)
11 PRK15489 nfrB bacteriophage N4 100.0 2.4E-32 5.2E-37 290.6 37.7 262 49-319 30-347 (703)
12 cd06427 CESA_like_2 CESA_like_ 100.0 1.6E-33 3.4E-38 271.0 24.6 228 84-317 1-238 (241)
13 cd04191 Glucan_BSP_ModH Glucan 100.0 2.8E-33 6E-38 269.1 22.7 222 86-311 1-253 (254)
14 cd06435 CESA_NdvC_like NdvC_li 100.0 1E-32 2.2E-37 264.4 21.4 224 87-316 1-235 (236)
15 TIGR03472 HpnI hopanoid biosyn 100.0 1.7E-31 3.6E-36 272.8 31.6 223 81-309 38-272 (373)
16 cd06421 CESA_CelA_like CESA_Ce 100.0 3.4E-30 7.5E-35 246.2 21.5 222 84-312 1-233 (234)
17 PF13641 Glyco_tranf_2_3: Glyc 100.0 9.7E-32 2.1E-36 256.2 6.4 218 84-308 1-228 (228)
18 cd02520 Glucosylceramide_synth 100.0 2.8E-30 6E-35 240.4 15.3 183 84-308 1-195 (196)
19 PLN02893 Cellulose synthase-li 100.0 9.2E-28 2E-32 252.8 35.8 252 80-336 97-522 (734)
20 cd04190 Chitin_synth_C C-termi 100.0 1.3E-30 2.9E-35 251.0 12.0 196 88-311 1-243 (244)
21 PF03142 Chitin_synth_2: Chiti 100.0 3.5E-28 7.6E-33 250.2 28.8 352 82-440 23-502 (527)
22 COG2943 MdoH Membrane glycosyl 100.0 8.2E-27 1.8E-31 230.1 32.6 365 84-479 144-577 (736)
23 cd06434 GT2_HAS Hyaluronan syn 100.0 6.7E-28 1.4E-32 230.7 21.2 214 85-310 1-233 (235)
24 TIGR03469 HonB hopene-associat 100.0 1E-25 2.2E-30 231.0 34.0 222 80-307 36-280 (384)
25 cd06439 CESA_like_1 CESA_like_ 100.0 1.5E-26 3.3E-31 223.7 22.9 217 80-311 25-250 (251)
26 cd04192 GT_2_like_e Subfamily 99.9 2.1E-26 4.6E-31 219.0 19.5 214 88-308 1-229 (229)
27 PLN02248 cellulose synthase-li 99.9 5.7E-24 1.2E-28 229.2 33.8 314 147-484 587-1056(1135)
28 PLN02195 cellulose synthase A 99.9 9.5E-24 2.1E-28 225.9 34.4 253 80-337 248-752 (977)
29 PLN02189 cellulose synthase 99.9 2.2E-23 4.7E-28 224.3 34.9 252 81-337 328-817 (1040)
30 cd02525 Succinoglycan_BP_ExoA 99.9 1.9E-24 4E-29 208.3 20.5 222 85-316 1-234 (249)
31 PLN02638 cellulose synthase A 99.9 1.4E-22 2.9E-27 218.9 33.6 252 81-337 346-855 (1079)
32 PLN02190 cellulose synthase-li 99.9 5.7E-23 1.2E-27 215.5 29.1 248 81-337 90-537 (756)
33 PLN02400 cellulose synthase 99.9 6.5E-23 1.4E-27 221.4 28.9 81 257-337 776-860 (1085)
34 PLN02436 cellulose synthase A 99.9 2.2E-22 4.7E-27 216.5 32.0 81 257-337 787-871 (1094)
35 PLN02915 cellulose synthase A 99.9 3.5E-22 7.6E-27 215.1 31.3 81 257-337 735-819 (1044)
36 cd06438 EpsO_like EpsO protein 99.9 1.6E-22 3.4E-27 186.0 16.2 169 88-268 1-183 (183)
37 cd06436 GlcNAc-1-P_transferase 99.9 3E-22 6.6E-27 185.5 15.9 168 88-265 1-191 (191)
38 cd04184 GT2_RfbC_Mx_like Myxoc 99.9 2.7E-22 5.9E-27 187.1 14.5 189 84-288 1-199 (202)
39 cd04195 GT2_AmsE_like GT2_AmsE 99.9 2E-21 4.3E-26 181.2 16.4 189 87-288 1-199 (201)
40 cd02510 pp-GalNAc-T pp-GalNAc- 99.9 1.3E-21 2.7E-26 194.4 15.9 200 87-292 1-227 (299)
41 PF13632 Glyco_trans_2_3: Glyc 99.8 1.1E-19 2.3E-24 168.6 15.6 136 172-309 4-143 (193)
42 PF03552 Cellulose_synt: Cellu 99.8 1E-19 2.2E-24 190.7 14.5 77 260-336 420-500 (720)
43 cd06433 GT_2_WfgS_like WfgS an 99.8 1.3E-19 2.7E-24 168.4 13.5 184 87-289 1-193 (202)
44 cd04196 GT_2_like_d Subfamily 99.8 1.5E-19 3.2E-24 169.9 13.5 191 87-288 1-201 (214)
45 PRK10073 putative glycosyl tra 99.8 5E-19 1.1E-23 177.2 17.8 195 82-288 4-214 (328)
46 PLN02726 dolichyl-phosphate be 99.8 2.2E-18 4.8E-23 165.9 21.2 203 81-294 6-222 (243)
47 cd06442 DPM1_like DPM1_like re 99.8 1.2E-18 2.5E-23 165.3 18.7 196 88-293 1-206 (224)
48 cd04185 GT_2_like_b Subfamily 99.8 4.8E-19 1E-23 165.4 14.9 165 88-295 1-178 (202)
49 cd02526 GT2_RfbF_like RfbF is 99.8 2.9E-19 6.2E-24 171.1 12.5 191 88-294 1-208 (237)
50 cd02522 GT_2_like_a GT_2_like_ 99.8 1.4E-18 3.1E-23 164.3 16.8 176 86-288 1-184 (221)
51 cd06913 beta3GnTL1_like Beta 1 99.8 2.5E-18 5.5E-23 162.7 18.1 193 88-289 1-208 (219)
52 cd04186 GT_2_like_c Subfamily 99.8 1.2E-18 2.6E-23 156.6 14.6 155 88-290 1-165 (166)
53 cd06423 CESA_like CESA_like is 99.8 6.2E-19 1.3E-23 159.2 12.6 171 88-265 1-180 (180)
54 cd06420 GT2_Chondriotin_Pol_N 99.8 4.4E-18 9.4E-23 155.9 16.0 168 88-289 1-180 (182)
55 COG1216 Predicted glycosyltran 99.8 8.6E-18 1.9E-22 167.2 15.2 202 83-294 2-224 (305)
56 PRK10018 putative glycosyl tra 99.8 2.1E-17 4.6E-22 161.1 17.6 218 82-316 3-231 (279)
57 PTZ00260 dolichyl-phosphate be 99.7 8.2E-16 1.8E-20 154.2 23.3 199 81-286 67-288 (333)
58 PRK10063 putative glycosyl tra 99.7 1.7E-16 3.7E-21 152.7 17.4 182 84-288 1-194 (248)
59 cd04188 DPG_synthase DPG_synth 99.7 1.3E-16 2.9E-21 150.0 16.0 191 88-293 1-209 (211)
60 PF13506 Glyco_transf_21: Glyc 99.7 9E-17 1.9E-21 145.8 12.4 145 157-307 16-175 (175)
61 KOG2547 Ceramide glucosyltrans 99.7 1.1E-15 2.4E-20 146.3 14.4 274 19-308 30-315 (431)
62 KOG2571 Chitin synthase/hyalur 99.6 2.5E-14 5.4E-19 152.8 22.0 136 173-310 447-598 (862)
63 cd04179 DPM_DPG-synthase_like 99.6 3.2E-15 7E-20 137.1 12.5 171 88-271 1-184 (185)
64 PF10111 Glyco_tranf_2_2: Glyc 99.6 2.2E-14 4.8E-19 140.9 18.1 196 87-290 1-222 (281)
65 PRK13915 putative glucosyl-3-p 99.6 2.4E-14 5.2E-19 141.7 17.7 190 81-283 28-238 (306)
66 PF00535 Glycos_transf_2: Glyc 99.6 2.4E-16 5.2E-21 141.4 3.0 161 87-255 1-169 (169)
67 TIGR01556 rhamnosyltran L-rham 99.6 5.1E-15 1.1E-19 145.7 12.5 188 92-294 2-205 (281)
68 PRK10714 undecaprenyl phosphat 99.6 5.1E-13 1.1E-17 133.7 25.4 184 83-285 5-199 (325)
69 cd04187 DPM1_like_bac Bacteria 99.6 1.9E-14 4.1E-19 131.8 13.2 167 88-270 1-179 (181)
70 cd00761 Glyco_tranf_GTA_type G 99.4 3E-12 6.4E-17 112.3 13.2 145 88-280 1-155 (156)
71 KOG2978 Dolichol-phosphate man 99.4 1.5E-11 3.2E-16 107.3 13.7 193 84-287 3-210 (238)
72 cd02511 Beta4Glucosyltransfera 99.2 2.8E-10 6E-15 108.5 12.7 97 85-197 1-105 (229)
73 COG0463 WcaA Glycosyltransfera 99.1 4.5E-10 9.7E-15 104.1 8.7 98 83-187 2-106 (291)
74 KOG2977 Glycosyltransferase [G 99.0 4.1E-08 8.8E-13 91.8 19.3 199 85-294 68-291 (323)
75 KOG3738 Predicted polypeptide 99.0 4.1E-10 8.9E-15 109.0 5.4 225 81-315 121-381 (559)
76 KOG3737 Predicted polypeptide 98.8 9.3E-09 2E-13 99.5 8.1 203 80-287 151-384 (603)
77 KOG3736 Polypeptide N-acetylga 98.7 6.3E-09 1.4E-13 108.5 3.8 210 80-295 138-378 (578)
78 cd02514 GT13_GLCNAC-TI GT13_GL 98.5 2.3E-06 4.9E-11 84.9 13.3 164 86-278 2-197 (334)
79 PF13712 Glyco_tranf_2_5: Glyc 98.3 2E-06 4.3E-11 80.9 7.1 172 87-296 2-203 (217)
80 cd00899 b4GalT Beta-4-Galactos 97.6 0.00014 3E-09 67.5 7.0 49 239-287 111-162 (219)
81 PF02709 Glyco_transf_7C: N-te 96.9 0.00057 1.2E-08 52.8 2.1 48 239-286 19-69 (78)
82 PF03452 Anp1: Anp1; InterPro 96.7 0.0092 2E-07 57.1 9.1 106 80-186 21-166 (269)
83 COG4092 Predicted glycosyltran 96.4 0.14 3.1E-06 48.1 14.6 185 84-275 2-216 (346)
84 KOG3588 Chondroitin synthase 1 96.4 0.033 7.1E-07 54.6 10.8 191 81-287 226-434 (494)
85 PRK14503 mannosyl-3-phosphogly 96.3 0.29 6.2E-06 48.4 16.9 182 83-276 50-283 (393)
86 TIGR02460 osmo_MPGsynth mannos 96.3 0.25 5.5E-06 48.4 16.4 181 83-277 49-283 (381)
87 PF09488 Osmo_MPGsynth: Mannos 96.2 0.046 9.9E-07 53.8 10.8 113 84-205 50-205 (381)
88 PF03071 GNT-I: GNT-I family; 96.0 0.051 1.1E-06 55.7 10.4 175 82-281 91-295 (434)
89 PF05679 CHGN: Chondroitin N-a 93.4 1.3 2.9E-05 47.1 13.4 189 83-286 246-463 (499)
90 PF13704 Glyco_tranf_2_4: Glyc 93.3 0.32 6.9E-06 39.0 6.7 38 93-133 1-38 (97)
91 KOG3916 UDP-Gal:glucosylcerami 92.8 0.41 8.8E-06 46.9 7.5 76 239-314 260-349 (372)
92 PRK14502 bifunctional mannosyl 92.6 0.73 1.6E-05 50.1 9.9 97 83-188 54-188 (694)
93 PF11316 Rhamno_transf: Putati 91.0 1.5 3.3E-05 41.6 9.2 81 101-188 46-139 (234)
94 PF06306 CgtA: Beta-1,4-N-acet 88.0 0.84 1.8E-05 44.4 4.9 53 85-142 88-140 (347)
95 KOG1413 N-acetylglucosaminyltr 80.7 45 0.00098 33.3 13.1 54 81-135 64-118 (411)
96 PF02364 Glucan_synthase: 1,3- 68.7 2.1E+02 0.0045 32.3 19.3 171 157-334 274-481 (817)
97 PLN02917 CMP-KDO synthetase 68.1 1.1E+02 0.0024 30.0 12.9 45 239-283 221-266 (293)
98 TIGR03310 matur_ygfJ molybdenu 66.4 36 0.00079 30.5 8.6 91 90-193 20-120 (188)
99 COG1212 KdsB CMP-2-keto-3-deox 64.3 1.3E+02 0.0028 28.3 11.9 40 242-282 178-219 (247)
100 cd04182 GT_2_like_f GT_2_like_ 62.3 43 0.00093 29.7 8.2 83 94-189 24-117 (186)
101 PF02434 Fringe: Fringe-like; 62.2 32 0.00069 33.0 7.6 97 173-283 93-203 (252)
102 TIGR00466 kdsB 3-deoxy-D-manno 55.8 1.1E+02 0.0023 29.0 10.0 41 242-283 180-222 (238)
103 TIGR03584 PseF pseudaminic aci 53.3 60 0.0013 30.4 7.7 148 94-257 22-189 (222)
104 PF12804 NTP_transf_3: MobA-li 52.5 53 0.0012 28.5 6.9 93 90-198 19-122 (160)
105 PF01762 Galactosyl_T: Galacto 50.8 1E+02 0.0022 28.0 8.7 42 239-280 148-192 (195)
106 PLN02458 transferase, transfer 49.6 2.5E+02 0.0055 28.0 11.2 79 83-170 111-197 (346)
107 TIGR03202 pucB xanthine dehydr 47.2 1.7E+02 0.0036 26.3 9.5 90 94-192 24-125 (190)
108 PF09258 Glyco_transf_64: Glyc 46.9 61 0.0013 31.0 6.7 96 86-193 1-105 (247)
109 TIGR02584 cas_NE0113 CRISPR-as 44.8 2.6E+02 0.0056 25.9 11.6 43 88-130 1-46 (209)
110 cd02503 MobA MobA catalyzes th 42.2 1.2E+02 0.0026 26.9 7.7 77 94-188 24-109 (181)
111 KOG1476 Beta-1,3-glucuronyltra 41.5 2.5E+02 0.0055 27.7 9.8 78 83-170 86-171 (330)
112 cd02516 CDP-ME_synthetase CDP- 41.3 2.1E+02 0.0046 26.1 9.5 91 89-191 22-124 (218)
113 PF05045 RgpF: Rhamnan synthes 39.9 3.5E+02 0.0076 28.9 11.7 24 178-201 383-406 (498)
114 PF09623 Cas_NE0113: CRISPR-as 39.3 1.5E+02 0.0033 27.9 7.8 54 87-140 3-61 (224)
115 cd02540 GT2_GlmU_N_bac N-termi 37.6 3E+02 0.0065 25.3 10.0 86 90-190 21-117 (229)
116 PRK05339 PEP synthetase regula 37.2 71 0.0015 30.9 5.4 21 263-283 154-174 (269)
117 PF03618 Kinase-PPPase: Kinase 36.8 47 0.001 31.9 4.1 21 264-284 149-169 (255)
118 PF11397 GlcNAc: Glycosyltrans 35.1 79 0.0017 31.9 5.6 51 239-289 207-261 (343)
119 PRK13385 2-C-methyl-D-erythrit 33.7 2.7E+02 0.0059 25.9 8.9 89 94-191 28-126 (230)
120 PF11735 CAP59_mtransfer: Cryp 33.7 3.6E+02 0.0077 25.7 9.5 63 88-151 4-70 (241)
121 PLN03183 acetylglucosaminyltra 32.1 6E+02 0.013 26.5 13.0 68 81-152 75-145 (421)
122 PF05060 MGAT2: N-acetylglucos 31.2 1.5E+02 0.0033 29.9 6.8 51 83-134 30-80 (356)
123 COG1512 Beta-propeller domains 30.0 3.3E+02 0.0072 26.4 8.7 46 94-141 46-91 (271)
124 COG3181 Uncharacterized protei 30.0 2E+02 0.0044 28.6 7.4 28 85-112 29-58 (319)
125 PF10138 vWA-TerF-like: vWA fo 28.9 3.5E+02 0.0075 25.0 8.2 34 93-128 83-119 (200)
126 cd00218 GlcAT-I Beta1,3-glucur 28.6 5E+02 0.011 24.4 10.2 38 84-124 1-41 (223)
127 PF14979 TMEM52: Transmembrane 28.0 2.2E+02 0.0048 24.6 6.2 33 82-114 60-92 (154)
128 PRK00317 mobA molybdopterin-gu 25.8 3.8E+02 0.0082 24.0 8.2 78 94-189 28-115 (193)
129 KOG0916 1,3-beta-glucan syntha 24.6 1.2E+03 0.027 28.3 13.0 153 158-310 1051-1222(1679)
130 PF13733 Glyco_transf_7N: N-te 24.6 1.2E+02 0.0025 26.1 4.0 38 84-124 47-88 (136)
131 cd01977 Nitrogenase_VFe_alpha 24.1 1.7E+02 0.0038 30.3 6.2 33 93-127 69-101 (415)
132 PF11181 YflT: Heat induced st 22.8 1.7E+02 0.0036 23.7 4.6 29 90-118 3-31 (103)
133 PF04666 Glyco_transf_54: N-Ac 21.7 7.8E+02 0.017 24.3 10.0 32 83-114 51-84 (297)
134 PRK02726 molybdopterin-guanine 21.6 3E+02 0.0065 25.0 6.7 80 94-189 31-119 (200)
135 COG1209 RfbA dTDP-glucose pyro 20.5 5.1E+02 0.011 25.2 7.8 191 89-296 25-229 (286)
No 1
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=9.9e-43 Score=377.22 Aligned_cols=336 Identities=22% Similarity=0.380 Sum_probs=240.6
Q ss_pred CCCCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcC-CCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC
Q 040333 80 SSNFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDD-STDPAIKQMVEQECQRWAAKGINIRYQIRENRTG 157 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~Dd-stD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g 157 (513)
.+..|+|||+||+|||+ +.+++++.++++||||+++++|+|+|| |+|++.+ ++++ .++++++++++++
T Consensus 256 ~~~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~-la~~---------~~v~yI~R~~n~~ 325 (852)
T PRK11498 256 MSLWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ-FAQE---------VGVKYIARPTHEH 325 (852)
T ss_pred cCCCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH-HHHH---------CCcEEEEeCCCCc
Confidence 35679999999999999 678899999999999998888877776 5666543 4431 4789998888888
Q ss_pred CchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCc--HHHHHHHh--hhhhhhhH
Q 040333 158 YKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANEC--LLTRMQEM--SLDYHFKV 225 (513)
Q Consensus 158 ~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~--~~~~~~~~--~~~~~~~~ 225 (513)
+|++|+|.|++.+. ++|||+ ||+|++++.++.+||++++||++..+.|.+.- ...+.+.. +-...+..
T Consensus 326 gKAGnLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~VglVQtp~~f~n~dp~~rnl~~~~~~~~e~~~fy~~ 405 (852)
T PRK11498 326 AKAGNINNALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGL 405 (852)
T ss_pred chHHHHHHHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeEEEEcceeccCCchHHHhhHHHhhcccchhHHHHH
Confidence 99999999999985 579999 99999999998799999999999888775421 11111111 11112223
Q ss_pred HHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHh
Q 040333 226 EQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRW 305 (513)
Q Consensus 226 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW 305 (513)
.+.+...... ..++|+++++||++++++|||++++++||+|++.|++++||++.|++++.+.++.|+|++++.+||.||
T Consensus 406 iq~g~~~~~a-~~~~Gs~aviRReaLeeVGGfd~~titED~dlslRL~~~Gyrv~yl~~~~a~glaPesl~~~~~QR~RW 484 (852)
T PRK11498 406 VQDGNDMWDA-TFFCGSCAVIRRKPLDEIGGIAVETVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRW 484 (852)
T ss_pred HHhHHHhhcc-cccccceeeeEHHHHHHhcCCCCCccCccHHHHHHHHHcCCEEEEEeccceeEECCCCHHHHHHHHHHH
Confidence 3333332222 336799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhHHHHHhhHhHhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhcCC-----chhhHHHHHHHHHH
Q 040333 306 SCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTILVPE-----VQVPIWGAVYIPSI 380 (513)
Q Consensus 306 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~~l~~~-----~~~~~~~~~~l~~~ 380 (513)
++|.+|.++++ +.+..+++++.+|+++..+.+.. +..+..+ ..++.|+.+++.. .+.......++|.+
T Consensus 485 arG~lQi~r~~--~pl~~~gL~~~qRl~y~~~~l~~---l~g~~~l--~~l~~Pl~~l~~gi~~i~a~~~~i~~y~lP~~ 557 (852)
T PRK11498 485 ARGMVQIFRLD--NPLTGKGLKLAQRLCYANAMLHF---LSGIPRL--IFLTAPLAFLLLHAYIIYAPALMIALFVLPHM 557 (852)
T ss_pred HHHHHHHHHHh--ChhccCCCCHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHhCChheeCChHHHHHHHHHHH
Confidence 99999999875 34557789999999766443211 1111111 1123444443211 12222234445555
Q ss_pred HHHH--HHhccchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCceeeccccCcc
Q 040333 381 ITIL--NSVGTPRSIHLLFYWI-LFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGDA 436 (513)
Q Consensus 381 ~~~~--~~~~~~~~~~~~~~~~-~~~~~~s~~~~~a~~~gl~~~g~~~~w~~T~k~~~~ 436 (513)
+... ......+. ...+|. +++.+++...+.+++.++++. ++..|.+|+|.+..
T Consensus 558 ~~~~l~~~~~~g~~--r~~~wseiye~v~a~~l~~~~~~~ll~p-~~~~F~VTpKg~~~ 613 (852)
T PRK11498 558 IHASLTNSRIQGKY--RHSFWSEIYETVLAWYIAPPTTVALFNP-HKGKFNVTAKGGLV 613 (852)
T ss_pred HHHHHHHHHhcCcc--hHhHHHHHHHHHHHHHHHHHHHHHHcCc-cCCCcccCCCCccc
Confidence 4322 22222221 223443 788888888888888888853 45589999995543
No 2
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=1.8e-42 Score=378.35 Aligned_cols=339 Identities=24% Similarity=0.388 Sum_probs=239.2
Q ss_pred CCCCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEc-CCCcHHHH-------------HHHHHHHHHHhhcC
Q 040333 80 SSNFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLD-DSTDPAIK-------------QMVEQECQRWAAKG 144 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~D-dstD~t~~-------------~l~~~~~~~~~~~~ 144 (513)
++..|+|||+||+|||+ +.+++|++++++||||+++++|+|+| +|||+|.+ ...+++++ .
T Consensus 127 ~~~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~-----~ 201 (713)
T TIGR03030 127 PEEWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCR-----K 201 (713)
T ss_pred cccCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHH-----H
Confidence 45689999999999999 46688999999999997777666655 58887621 11222332 3
Q ss_pred CcEEEEEecCCCCCchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCC---cH--H
Q 040333 145 INIRYQIRENRTGYKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANE---CL--L 211 (513)
Q Consensus 145 ~~i~~i~~~~~~g~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~---~~--~ 211 (513)
.+++++.++++.++|++|+|.|++++. ++|||. ||+|++++.+|.+||++++||++..+.|.+. +. .
T Consensus 202 ~~v~yi~r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~dp~v~~Vqtp~~f~~p~~~~~nl~~~ 281 (713)
T TIGR03030 202 LGVNYITRPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVEDPKLFLVQTPHFFVSPDPIERNLGTF 281 (713)
T ss_pred cCcEEEECCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhCCCEEEEeCCeeccCCCHHhhhhHHH
Confidence 578999888888899999999999984 579999 9999999999988999999999988777542 11 1
Q ss_pred HHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccC
Q 040333 212 TRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSEL 291 (513)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 291 (513)
.+... +....+...+.+.+..+. ..++|+++++||++++++|||++++++||++++.|++++||++.|++++.++++.
T Consensus 282 ~~~~~-e~~~f~~~i~~g~~~~~~-~~~~Gs~~~iRR~al~~iGGf~~~~vtED~~l~~rL~~~G~~~~y~~~~~~~g~~ 359 (713)
T TIGR03030 282 RRMPN-ENELFYGLIQDGNDFWNA-AFFCGSAAVLRREALDEIGGIAGETVTEDAETALKLHRRGWNSAYLDRPLIAGLA 359 (713)
T ss_pred HHhhh-HHHHHHHHHHHHHhhhCC-eeecCceeEEEHHHHHHcCCCCCCCcCcHHHHHHHHHHcCCeEEEeccccccccC
Confidence 11110 111122222333333232 3467999999999999999999999999999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHhhhchhHHHHHhhHhHhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhcCC-----
Q 040333 292 PSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTILVPE----- 366 (513)
Q Consensus 292 p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~~l~~~----- 366 (513)
|+|++++.+||.||++|.+|.++.. +.+..+++++.+|++++.+.+.. +.++..+ ..++.|+.+++..
T Consensus 360 p~sl~~~~~Qr~RWa~G~~qi~~~~--~pl~~~gl~~~qrl~y~~~~~~~---~~~~~~~--~~~~~P~~~l~~~~~~~~ 432 (713)
T TIGR03030 360 PETLSGHIGQRIRWAQGMMQIFRLD--NPLLKRGLSFPQRLCYLNAMLFW---FFPLPRV--IFLTAPLAYLFFGLNIFV 432 (713)
T ss_pred CCCHHHHHHHHHHHhcChHHHHhhh--CccccCCCCHHHHHHHHHHHHHH---HHHHHHH--HHHHHHHHHHHhCCccee
Confidence 9999999999999999999998753 45566789999999876543221 1121111 1123454443311
Q ss_pred chhhHHHHHHHHHHHHHHH--HhccchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCceeeccccCc
Q 040333 367 VQVPIWGAVYIPSIITILN--SVGTPRSIHLLFYW-ILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLGD 435 (513)
Q Consensus 367 ~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~s~~~~~a~~~gl~~~g~~~~w~~T~k~~~ 435 (513)
.....+...++|.++.... .....+. ...+| -+|+.+++.+.+.+++.+++.. ++.+|.+|+|.+.
T Consensus 433 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~F~VT~Kg~~ 501 (713)
T TIGR03030 433 ASALEILAYALPHMLHSLLTNSYLFGRV--RWPFWSEVYETVLAVYLLPPVLVTLLNP-KKPKFNVTPKGEL 501 (713)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHcCCe--ecchHHHHHHHHHHHHHHHHHHHHHhCc-CCCCceecCCCcc
Confidence 1122233444555543321 1111111 11233 3888888888899999999854 3448999999554
No 3
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=1.3e-41 Score=354.86 Aligned_cols=235 Identities=21% Similarity=0.287 Sum_probs=200.5
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCch
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKA 160 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka 160 (513)
+..|.|||+||+|||++.+++|++|+++|+||+.+++| |+|+|+|+|.+.+ ++.. .+.+++++++.+ +++||+
T Consensus 72 ~~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIiv-VdDgs~D~t~~~~-~~~~----~~~~~v~vv~~~-~n~Gka 144 (444)
T PRK14583 72 KGHPLVSILVPCFNEGLNARETIHAALAQTYTNIEVIA-INDGSSDDTAQVL-DALL----AEDPRLRVIHLA-HNQGKA 144 (444)
T ss_pred CCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEE-EECCCCccHHHHH-HHHH----HhCCCEEEEEeC-CCCCHH
Confidence 45799999999999999999999999999999866544 7777999987754 3333 335678888654 456699
Q ss_pred hHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhh
Q 040333 161 GALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSA 232 (513)
Q Consensus 161 ~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (513)
+|+|.|++.+. ++|+|. ||+++++++++.++|++++|++.....|. .++.++.|..++...+...+.....
T Consensus 145 ~AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~g~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~ 223 (444)
T PRK14583 145 IALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVTGNPRIRTR-STLIGRVQVGEFSSIIGLIKRTQRV 223 (444)
T ss_pred HHHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEEccceecCC-CcchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999884 479999 99999999999889999999999887775 5677888877766665555555566
Q ss_pred ccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchhHH
Q 040333 233 THAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANL 312 (513)
Q Consensus 233 ~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~ 312 (513)
.+..+..+|+++++||++++++|||+++.++||.|++.|++++||++.|.|++.++++.|+|++++.+||.||++|..|.
T Consensus 224 ~g~~~~~sG~~~~~rr~al~~vGg~~~~~i~ED~dl~~rl~~~G~~i~~~p~a~~~~~~p~t~~~~~~Qr~RW~~G~~~~ 303 (444)
T PRK14583 224 YGQVFTVSGVVAAFRRRALADVGYWSPDMITEDIDISWKLQLKHWSVFFEPRGLCWILMPETLRGLWKQRLRWAQGGAEV 303 (444)
T ss_pred hCCceEecCceeEEEHHHHHHcCCCCCCcccccHHHHHHHHHcCCeEEEeeccEEeeeCCCCHHHHHHHHHHHhCcHHHH
Confidence 67777788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhHhHhhc
Q 040333 313 FRKMVMEIIRN 323 (513)
Q Consensus 313 ~~~~~~~~~~~ 323 (513)
+.++..+.+..
T Consensus 304 ~~~~~~~~~~~ 314 (444)
T PRK14583 304 FLKNMFKLWRW 314 (444)
T ss_pred HHHHHHHHhCc
Confidence 99987766543
No 4
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=2.1e-41 Score=352.36 Aligned_cols=237 Identities=24% Similarity=0.333 Sum_probs=200.8
Q ss_pred CCCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCc
Q 040333 80 SSNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYK 159 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~K 159 (513)
.+..|+|||+||+|||++.+++|++|+++|+||+.|++| |+|+|+|+|.+. .++. ..+++++++++.+ +++||
T Consensus 50 ~~~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiV-vdD~s~d~t~~~-l~~~----~~~~~~v~~i~~~-~n~Gk 122 (420)
T PRK11204 50 LKEYPGVSILVPCYNEGENVEETISHLLALRYPNYEVIA-INDGSSDNTGEI-LDRL----AAQIPRLRVIHLA-ENQGK 122 (420)
T ss_pred cCCCCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCccHHHH-HHHH----HHhCCcEEEEEcC-CCCCH
Confidence 456789999999999999999999999999999766554 777799998774 4433 3345678888644 45569
Q ss_pred hhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhh
Q 040333 160 AGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGS 231 (513)
Q Consensus 160 a~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (513)
++|+|.|++.+. ++|+|. ||+|+++++.++++|++++|+|.....|. .++.++.|..++...+...+...+
T Consensus 123 a~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 201 (420)
T PRK11204 123 ANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVTGNPRIRNR-STLLGRIQVGEFSSIIGLIKRAQR 201 (420)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEECCceeccc-hhHHHHHHHHHHHHhhhHHHHHHH
Confidence 999999999884 479999 99999999999889999999999887775 467777776666655554455555
Q ss_pred hccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchhH
Q 040333 232 ATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPAN 311 (513)
Q Consensus 232 ~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 311 (513)
..+...+.+|+++++||++++++|||+++..+||.|++.|++++||++.|.|++.++++.|+|++++.+||+||++|.+|
T Consensus 202 ~~~~~~~~~G~~~~~rr~~l~~vgg~~~~~~~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 281 (420)
T PRK11204 202 VYGRVFTVSGVITAFRKSALHEVGYWSTDMITEDIDISWKLQLRGWDIRYEPRALCWILMPETLKGLWKQRLRWAQGGAE 281 (420)
T ss_pred HhCCceEecceeeeeeHHHHHHhCCCCCCcccchHHHHHHHHHcCCeEEeccccEEEeECcccHHHHHHHHHHHhcCHHH
Confidence 56666677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHhHhhcC
Q 040333 312 LFRKMVMEIIRNK 324 (513)
Q Consensus 312 ~~~~~~~~~~~~~ 324 (513)
.++++.+..+..+
T Consensus 282 ~l~~~~~~~~~~~ 294 (420)
T PRK11204 282 VLLKNFRRLWRWK 294 (420)
T ss_pred HHHHHHHHhcCcc
Confidence 9999877666543
No 5
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.7e-37 Score=332.57 Aligned_cols=372 Identities=18% Similarity=0.207 Sum_probs=254.8
Q ss_pred CCCCCeEEEEEecCCChH-----HHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHH----HHHHHHhhcCCcEEEE
Q 040333 80 SSNFPVVLIQIPMFNEKE-----VYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVE----QECQRWAAKGINIRYQ 150 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~-----~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~----~~~~~~~~~~~~i~~i 150 (513)
.+..|+|+|+||+|||+. .++.+++|+++|+|+ .+++|+|+||++|+......+ ++++++. .+.++.|.
T Consensus 120 ~~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~-~~~~i~yr 197 (691)
T PRK05454 120 PPPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDIAAAEEAAWLELRAELG-GEGRIFYR 197 (691)
T ss_pred CCCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhHHHHHHHHHHHHHHhcC-CCCcEEEE
Confidence 355789999999999994 689999999999997 356777888877776554333 3344442 24689999
Q ss_pred EecCCCCCchhHHHHHhhh--c---c--cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhh
Q 040333 151 IRENRTGYKAGALKEGLKR--S---Y--VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLD 220 (513)
Q Consensus 151 ~~~~~~g~Ka~aln~gl~~--a---~--v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~ 220 (513)
+|.++.+.|+||+|.+++. . + ++|||. +|++.+++..|++||++|+||+.+...|. +++++++|++...
T Consensus 198 ~R~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQt~~~~~n~-~slfaR~qqf~~~ 276 (691)
T PRK05454 198 RRRRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQTLPVAVGA-DTLFARLQQFATR 276 (691)
T ss_pred ECCcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEeCCccCcCC-CCHHHHHHHHHHH
Confidence 8888888899999999876 2 2 589999 99999999999789999999999998887 4899999875433
Q ss_pred hhhhHHHHhhh-hccCcccccccchHhhHHHHHHhC---------CcCCCCccchHHHHHHHHhCCCeEEEecc-ceecc
Q 040333 221 YHFKVEQEVGS-ATHAFFGFNGTAGVWRIAAINEAG---------GWKDRTTVEDMDLAVRASLKGWKFVYLGD-LQVKS 289 (513)
Q Consensus 221 ~~~~~~~~~~~-~~~~~~~~~G~~~~~Rr~~l~~~G---------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~-~~~~~ 289 (513)
........+.+ ..++..++.|+|.++|++++.+++ +|+++.++||++++.+++++||++.|+|+ ..+++
T Consensus 277 ~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd~~~~~e 356 (691)
T PRK05454 277 VYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWLAPDLPGSYE 356 (691)
T ss_pred HHHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHHCCCEEEEcCccccccc
Confidence 32222111111 112334578999999999999865 46677889999999999999999999999 57899
Q ss_pred cCCcCHHHHHHHHHHhhhchhHHHHHhhHhHhhcCCCChhHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhhH
Q 040333 290 ELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSF--------FFVRKIIAHMVTFSFYCVVLPLT 361 (513)
Q Consensus 290 ~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~i~~~~~~~~~~~~~p~~ 361 (513)
+.|+|+.++.+||+||++|++|.++.. ..+++++.+|.+++.+. +++..++.++..+..+ +..|..
T Consensus 357 e~P~tl~~~~~qr~RW~~G~lQ~l~~l-----~~~gl~~~~R~~~l~g~~~yl~~P~wll~l~l~~~~~~~~~-~~~~~~ 430 (691)
T PRK05454 357 ELPPNLLDELKRDRRWCQGNLQHLRLL-----LAKGLHPVSRLHFLTGIMSYLSAPLWLLFLLLGTALALQAA-LTEPEY 430 (691)
T ss_pred cCCCCHHHHHHHHHHHHhchHHHHHHH-----HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhh
Confidence 999999999999999999999987643 35678888888754321 2222222222221111 112222
Q ss_pred hhcC--Cchhh-------HH------HHHHHHHHHHHHHHhccch---h---HHHHH--------HHHHHHHHHHHHHHH
Q 040333 362 ILVP--EVQVP-------IW------GAVYIPSIITILNSVGTPR---S---IHLLF--------YWILFENVMSLHRTK 412 (513)
Q Consensus 362 ~l~~--~~~~~-------~~------~~~~l~~~~~~~~~~~~~~---~---~~~~~--------~~~~~~~~~s~~~~~ 412 (513)
+..+ ...+| .+ .+.++|.+++++..+...+ . ...+. +..++.+++.+..+.
T Consensus 431 f~~~~~~~~wp~~~~~~a~~L~~~~l~ll~~Pklls~~~~l~~~~~~~~~gg~~rll~s~llE~~~s~l~aPi~ml~~~~ 510 (691)
T PRK05454 431 FQPRQLFPVWPQWDPELAIALFAATMVLLFLPKLLGLLLVLLDPKRRRAFGGALRLLLSVLLETLFSALLAPIRMLFHTR 510 (691)
T ss_pred hcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 01111 11 1223344444444433211 1 11111 223466667888889
Q ss_pred HHHHHHHhcCCCCceeeccccCcccccchhhhhcccCCCCCCCCcccccchhHHHHHHHHHHHHHHHHH
Q 040333 413 ATFIGLLEAGRANEWVVTEKLGDALKNKAADAKNKTNTKAPKKPKIKFAERMHTLELGFGVFLFFCGCY 481 (513)
Q Consensus 413 a~~~gl~~~g~~~~w~~T~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 481 (513)
+++..+. |++.+|+..+|.+. +.+|++. -+.++.+.++|+.+...+++
T Consensus 511 ~v~~~l~--g~~~~W~~q~R~~~-------~~~~~~~------------~~~~~~~~~~g~~~~~~~~~ 558 (691)
T PRK05454 511 FVVSILL--GRDVGWNSQRRDDG-------STPWGEA------------FRRHGWHTLLGLVLAAGAAW 558 (691)
T ss_pred HHHHHHh--CccCCCCchhhcCC-------CCCHHHH------------HHHHHHHHHHHHHHHHHHHH
Confidence 9998888 88889999998532 2245443 26788888888877544433
No 6
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=3.1e-37 Score=321.09 Aligned_cols=233 Identities=16% Similarity=0.206 Sum_probs=180.4
Q ss_pred CCCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEE-EcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 80 SSNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQV-LDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V-~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
++..|+|||+||+|||++.+++||+|+.+|+||+++++|+| +|+|+|+|.+.+ ++.. +++++++++..+ +++|
T Consensus 45 ~~~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il-~~~~----~~~~~v~v~~~~-~~~G 118 (439)
T TIGR03111 45 IGKLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVF-CRAQ----NEFPGLSLRYMN-SDQG 118 (439)
T ss_pred cCCCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHH-HHHH----HhCCCeEEEEeC-CCCC
Confidence 35679999999999999999999999999999987765554 456899997743 3322 334566665444 4577
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCC----Cc----HHHHHHHhhhhhh
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNAN----EC----LLTRMQEMSLDYH 222 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~----~~~~~~~~~~~~~ 222 (513)
|++|+|.|++.+. ++|+|. ||+++++++.+.+||++++++|........ .. ...+.+..++...
T Consensus 119 ka~AlN~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 198 (439)
T TIGR03111 119 KAKALNAAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENNPDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQA 198 (439)
T ss_pred HHHHHHHHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhCCCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHH
Confidence 9999999999984 479999 999999999997799999999887542210 01 1122221222222
Q ss_pred hhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHH-hCCCeEEEeccceecccCCcCHHHHHHH
Q 040333 223 FKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRAS-LKGWKFVYLGDLQVKSELPSTFKAFRFQ 301 (513)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~-~~G~ki~~~~~~~~~~~~p~t~~~~~~Q 301 (513)
+...+...+..+.....+|+++++||++++++|||++++++||+|++.+++ ..|+++.++|++.++++.|+|++++.+|
T Consensus 199 ~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~p~t~~~~~~Q 278 (439)
T TIGR03111 199 FLAGRNFESQVNSLFTLSGAFSAFRRETILKTQLYNSETVGEDTDMTFQIRELLDGKVYLCENAIFYVDPIDGLNKLYTQ 278 (439)
T ss_pred HHhhhHHHHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCcCccHHHHHHHHHhcCCeEEECCCCEEEEECCcCHHHHHHH
Confidence 222222333444556678999999999999999999999999999999997 4699999999999999999999999999
Q ss_pred HHHhhhchhHHHHHhhH
Q 040333 302 QHRWSCGPANLFRKMVM 318 (513)
Q Consensus 302 r~RW~~G~~~~~~~~~~ 318 (513)
|.||.+|.+|+++++..
T Consensus 279 R~RW~rG~~qv~~~~~~ 295 (439)
T TIGR03111 279 RQRWQRGELEVSHMFFE 295 (439)
T ss_pred HHHHhccHHHHHHHHHh
Confidence 99999999999987654
No 7
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=100.00 E-value=1.1e-37 Score=298.12 Aligned_cols=224 Identities=54% Similarity=0.947 Sum_probs=192.0
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHH
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGAL 163 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~al 163 (513)
|+|||+||+|||++.|.++|+|+++|+||.++++|+|+|||+|+|.+.+ ++..+++...+.+++++.+.+++|+|++|+
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s~D~t~~~~-~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~ 79 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDSTDETVRLA-REIVEEYAAQGVNIKHVRRADRTGYKAGAL 79 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECCCCcHHHHH-HHHHHHHhhcCCceEEEECCCCCCCchHHH
Confidence 6799999999999999999999999999988778878888999998854 444455555567888887777778899999
Q ss_pred HHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccC
Q 040333 164 KEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHA 235 (513)
Q Consensus 164 n~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (513)
|.|++.+. ++|+|. |++|+++...+ +++++++|+++....|.+.+++.+.+...+.+++...+......+.
T Consensus 80 n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (232)
T cd06437 80 AEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYF-ADPKLGFVQTRWGHINANYSLLTRVQAMSLDYHFTIEQVARSSTGL 158 (232)
T ss_pred HHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhh-cCCCeEEEecceeeEcCCCchhhHhhhhhHHhhhhHhHhhHhhcCC
Confidence 99999985 479999 99999977776 7899999999988888777888887776666555554444444455
Q ss_pred cccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhch
Q 040333 236 FFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGP 309 (513)
Q Consensus 236 ~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 309 (513)
..+++|+++++||++++++|||++....||++++.|+..+||++.|.|++.++++.|.|++++.+||.||++|.
T Consensus 159 ~~~~~g~~~~~rr~~~~~vgg~~~~~~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~rW~~g~ 232 (232)
T cd06437 159 FFNFNGTAGVWRKECIEDAGGWNHDTLTEDLDLSYRAQLKGWKFVYLDDVVVPAELPASMSAYRSQQHRWSKGP 232 (232)
T ss_pred eEEeccchhhhhHHHHHHhCCCCCCcchhhHHHHHHHHHCCCeEEEeccceeeeeCCcCHHHHHHHHHHhccCC
Confidence 55678999999999999999999988899999999999999999999999999999999999999999999984
No 8
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=1e-35 Score=308.70 Aligned_cols=231 Identities=16% Similarity=0.155 Sum_probs=174.0
Q ss_pred CCCCCeEEEEEecCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEec-CCCC
Q 040333 80 SSNFPVVLIQIPMFNEKEVYKISIGAAC-GLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRE-NRTG 157 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~~l~~~l~sl~-~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~-~~~g 157 (513)
..+.|+++|+||+|||+++|+++|+|++ ++|||+.++.| ++|+|+|+|.+.+ ++.++ ++++++.+..+ +.+.
T Consensus 62 ~~~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiV-v~d~ndd~T~~~v-~~l~~----~~p~v~~vv~~~~gp~ 135 (504)
T PRK14716 62 SVPEKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFV-GTYPNDPATLREV-DRLAA----RYPRVHLVIVPHDGPT 135 (504)
T ss_pred cCCCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEE-EECCCChhHHHHH-HHHHH----HCCCeEEEEeCCCCCC
Confidence 4558999999999999999999999965 78999766544 5677888887744 43333 35666654322 2234
Q ss_pred CchhHHHHHhhhc-----------c---cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHH-HHHHHhhh
Q 040333 158 YKAGALKEGLKRS-----------Y---VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLL-TRMQEMSL 219 (513)
Q Consensus 158 ~Ka~aln~gl~~a-----------~---v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~-~~~~~~~~ 219 (513)
+|++|+|.|++.+ . +.|||. ||+|+.+...+ ++.++||.+....+.+.+.+ +.....++
T Consensus 136 ~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~---~~~~~VQ~pv~~~~~~~~~~~ag~y~~ef 212 (504)
T PRK14716 136 SKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLL---PRHDFVQLPVFSLPRDWGEWVAGTYMDEF 212 (504)
T ss_pred CHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhc---CCCCEEecceeccCCchhHHHHHHHHHHH
Confidence 6999999998653 1 469999 99999877665 45678888776555444333 33332333
Q ss_pred hhhhhHHHHhhhhccCcccccccchHhhHHHHHHh-----CC-cCCCCccchHHHHHHHHhCCCeEEEeccceec-----
Q 040333 220 DYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEA-----GG-WKDRTTVEDMDLAVRASLKGWKFVYLGDLQVK----- 288 (513)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~-----Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~----- 288 (513)
...+......+...+...+.+|+++++||++++++ |+ |++++++||+|++.|+.++|+|+.|+|+++++
T Consensus 213 ~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sLTED~dLglRL~~~G~rv~y~p~ai~~~~~~~ 292 (504)
T PRK14716 213 AESHLKDLPVREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSLTEDYDIGLRLKRAGFRQIFVRVRADDTTDRP 292 (504)
T ss_pred HHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCcchHHHHHHHHHHCCCEEEEeccccccccccc
Confidence 33333334456677777778899999999999998 33 99999999999999999999999999998543
Q ss_pred ----------ccCCcCHHHHHHHHHHhhhch-hHHHHHhhHh
Q 040333 289 ----------SELPSTFKAFRFQQHRWSCGP-ANLFRKMVME 319 (513)
Q Consensus 289 ----------~~~p~t~~~~~~Qr~RW~~G~-~~~~~~~~~~ 319 (513)
++.|.|++++.+||.||..|. +|.+++..++
T Consensus 293 ~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~ 334 (504)
T PRK14716 293 DRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWK 334 (504)
T ss_pred ccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCC
Confidence 668999999999999999995 7888765543
No 9
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.3e-34 Score=299.40 Aligned_cols=228 Identities=29% Similarity=0.471 Sum_probs=194.1
Q ss_pred CCeEEEEEecCCChH-HHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchh
Q 040333 83 FPVVLIQIPMFNEKE-VYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAG 161 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~-~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~ 161 (513)
.|+|+|+||+|||++ +++++++|+++||||+.++.+ |+|||+|++.+. +++..+++ ++++++...+++++||++
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~eviv-v~d~~~d~~~~~-~~~~~~~~---~~~~~~~~~~~~~~gK~~ 127 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIV-VDDGSTDETYEI-LEELGAEY---GPNFRVIYPEKKNGGKAG 127 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEE-ECCCCChhHHHH-HHHHHhhc---CcceEEEeccccCccchH
Confidence 599999999999997 999999999999999866554 777799999884 44444332 145555522356778999
Q ss_pred HHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCC--CcHHHHHHHhhhhhhhhHHHHhhh
Q 040333 162 ALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNAN--ECLLTRMQEMSLDYHFKVEQEVGS 231 (513)
Q Consensus 162 aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (513)
|+|.|++.+. ++|+|+ ||+|.+++++| .+++.+++++.....|.. .+++++.+..++...+........
T Consensus 128 al~~~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f-~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 206 (439)
T COG1215 128 ALNNGLKRAKGDVVVILDADTVPEPDALRELVSPF-EDPPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLRAAS 206 (439)
T ss_pred HHHHHHhhcCCCEEEEEcCCCCCChhHHHHHHhhh-cCCCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhhhhh
Confidence 9999999984 479999 99999999999 666666777777766654 678899998888887777766666
Q ss_pred hccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchhH
Q 040333 232 ATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPAN 311 (513)
Q Consensus 232 ~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 311 (513)
..+....++|++.++||+++++.|||++++++||.+++.+++.+|||+.|++++.++++.|+|++++++||.||.+|.+|
T Consensus 207 ~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i~ED~~lt~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g~~~ 286 (439)
T COG1215 207 KGGLISFLSGSSSAFRRSALEEVGGWLEDTITEDADLTLRLHLRGYRVVYVPEAIVWTEAPETLKELWRQRLRWARGGLQ 286 (439)
T ss_pred hcCCeEEEcceeeeEEHHHHHHhCCCCCCceeccHHHHHHHHHCCCeEEEeecceEeeeCcccHHHHHHHHHHHHcccce
Confidence 77777778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 040333 312 LFRKM 316 (513)
Q Consensus 312 ~~~~~ 316 (513)
.+..+
T Consensus 287 ~~~~~ 291 (439)
T COG1215 287 VLLLH 291 (439)
T ss_pred eeehh
Confidence 88654
No 10
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=6e-33 Score=299.21 Aligned_cols=231 Identities=20% Similarity=0.225 Sum_probs=176.9
Q ss_pred CCCCCCeEEEEEecCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEec-CCC
Q 040333 79 GSSNFPVVLIQIPMFNEKEVYKISIGAAC-GLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRE-NRT 156 (513)
Q Consensus 79 ~~~~~P~VsIiIP~yNE~~~l~~~l~sl~-~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~-~~~ 156 (513)
.++..|+|||+||+|||+.++.+++++++ +||||+.++.+ ++|+++|+|.+ .++++++++ ++++.+..+ ..+
T Consensus 58 ~~~~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~v-i~~~nD~~T~~-~~~~l~~~~----p~~~~v~~~~~g~ 131 (727)
T PRK11234 58 YKPDEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFV-GTYPNDPATQA-DVDAVCARF----PNVHKVVCARPGP 131 (727)
T ss_pred ccCCCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEE-EecCCChhHHH-HHHHHHHHC----CCcEEEEeCCCCC
Confidence 35667999999999999999999999987 79999855433 44444444555 566555553 555544322 235
Q ss_pred CCchhHHHHHhhhc---------c-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCC-CcHHHHHHHhh
Q 040333 157 GYKAGALKEGLKRS---------Y-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNAN-ECLLTRMQEMS 218 (513)
Q Consensus 157 g~Ka~aln~gl~~a---------~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~~~~~~~~~~~ 218 (513)
+||++|+|.+++.+ . +.|||+ ||+|+ +++++ .++. ++||++....+.+ .++.++.+..+
T Consensus 132 ~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~-~~~~l-~~~~-~~VQ~p~~p~~~~~~~~~~~~~~~E 208 (727)
T PRK11234 132 TSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVISPMELR-LFNYL-VERK-DLIQIPVYPFEREWTHFTSGTYIDE 208 (727)
T ss_pred CCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHH-HHHhh-cCCC-CeEeecccCCCccHHHHHHHHHHHH
Confidence 67999999999876 1 379999 99997 67777 4555 8999986644432 23455666667
Q ss_pred hhhhhhHHHHhhhhccCcccccccchHh-hH--HHHHHhC---CcCCCCccchHHHHHHHHhCCCeEEEecc--------
Q 040333 219 LDYHFKVEQEVGSATHAFFGFNGTAGVW-RI--AAINEAG---GWKDRTTVEDMDLAVRASLKGWKFVYLGD-------- 284 (513)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~-Rr--~~l~~~G---g~~~~~~~ED~~l~~rl~~~G~ki~~~~~-------- 284 (513)
+...+...+.+....++..++.|+++++ || +++.+.| +|+.++++||+|++.|++.+||++.|+|.
T Consensus 209 Fa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v~~~~~~ 288 (727)
T PRK11234 209 FAELHGKDVPVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPVVDEAKE 288 (727)
T ss_pred HHHHhhhhhHHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHHHHHCCCEEEEccccccccccc
Confidence 6665555556677777777889999999 77 5788888 69999999999999999999999999992
Q ss_pred ---------------ceecccCCcCHHHHHHHHHHhhhc-hhHHHHHhhH
Q 040333 285 ---------------LQVKSELPSTFKAFRFQQHRWSCG-PANLFRKMVM 318 (513)
Q Consensus 285 ---------------~~~~~~~p~t~~~~~~Qr~RW~~G-~~~~~~~~~~ 318 (513)
+.++++.|.|+++..+||.||..| .+|.++...|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~~~~w 338 (727)
T PRK11234 289 REQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFKTLGW 338 (727)
T ss_pred ccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHHHhCC
Confidence 347788999999999999999999 5888876653
No 11
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=2.4e-32 Score=290.60 Aligned_cols=262 Identities=17% Similarity=0.175 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHHHHhhhccc---C---CCCcccccCCCCCCeEEEEEecCCChHHHHHHHHHHH-cCCCCCCceEEEEE
Q 040333 49 LAMSLMLFMERVYMGIKRYNW---Q---PIEDDVELGSSNFPVVLIQIPMFNEKEVYKISIGAAC-GLSWPSDRLVIQVL 121 (513)
Q Consensus 49 l~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~P~VsIiIP~yNE~~~l~~~l~sl~-~q~yp~~~~~I~V~ 121 (513)
+...--++++..|+.++.+|+ . .....++..+.+.|++||+||+|||++++.+++++++ ++|||++++.| ++
T Consensus 30 i~~~ddl~~d~~yw~r~~~r~~~~~~~~~~~~~~~l~~~~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~~~I~v-~~ 108 (703)
T PRK15489 30 ISSLDDLFIDAWYWVRELYRWLTRERRYRPLTAEQLRERDEQPLAIMVPAWKEYDVIAKMIENMLATLDYRRYVIFV-GT 108 (703)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhhccccCCCCChHHhcccCCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCCeEEEE-Ee
Confidence 333334667777665422221 1 1111222234567899999999999999999999986 89999875433 23
Q ss_pred cCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecC-CCCCchhHHHHHhhhc--------------ccccCCh---HHHHHH
Q 040333 122 DDSTDPAIKQMVEQECQRWAAKGINIRYQIREN-RTGYKAGALKEGLKRS--------------YVKHCEY---PDYLRR 183 (513)
Q Consensus 122 DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~-~~g~Ka~aln~gl~~a--------------~v~DaD~---pd~L~~ 183 (513)
+..+++|.+.+ ++. ....++++.++.++ .+.||+.|||.|++.+ -+.|||. |+.|+.
T Consensus 109 ~~nD~~T~~~~-~~~----~~~~p~~~~v~~~~~gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~ 183 (703)
T PRK15489 109 YPNDAETITEV-ERM----RRRYKRLVRVEVPHDGPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKY 183 (703)
T ss_pred cCCCccHHHHH-HHH----hccCCcEEEEEcCCCCCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHH
Confidence 22223555533 322 23345777766543 3357999999999875 1379999 999987
Q ss_pred HHHHhhcCCCeEEEeeeEE-EecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHh---CC---
Q 040333 184 AIPYLVQNSDIALVQARWR-FVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEA---GG--- 256 (513)
Q Consensus 184 lv~~~~~~~~v~~V~~~~~-~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~---Gg--- 256 (513)
+ +++..++ +++|++.. ..|...+++++.+..||...+......+...++..+.+|++++|||++++++ ||
T Consensus 184 ~-~~~~~~~--~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l~~~gg~~~ 260 (703)
T PRK15489 184 F-NYLLPRK--DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLALMKERGNQP 260 (703)
T ss_pred H-HhhcCCc--ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHHHHHhcCCCC
Confidence 7 5553444 67888754 4555678999999999999888777778888888889999999999999887 54
Q ss_pred cCCCCccchHHHHHHHHhCCCeEEEec-----------------------cceecccCCcCHHHHHHHHHHhhhchh-HH
Q 040333 257 WKDRTTVEDMDLAVRASLKGWKFVYLG-----------------------DLQVKSELPSTFKAFRFQQHRWSCGPA-NL 312 (513)
Q Consensus 257 ~~~~~~~ED~~l~~rl~~~G~ki~~~~-----------------------~~~~~~~~p~t~~~~~~Qr~RW~~G~~-~~ 312 (513)
|+.++++||+|++.|++++|+++.|+- ...+.++.|.|+++..+||.||..|.. |.
T Consensus 261 ~n~~sLTED~Dlg~RL~~~G~r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~ 340 (703)
T PRK15489 261 FNTSSLTEDYDFSFRLAELGMQEIFVRFPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQG 340 (703)
T ss_pred CCCCCchHhHHHHHHHHHCCCceEEEEEeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhh
Confidence 777888999999999999999999821 134557889999999999999999988 88
Q ss_pred HHHhhHh
Q 040333 313 FRKMVME 319 (513)
Q Consensus 313 ~~~~~~~ 319 (513)
+++..|.
T Consensus 341 ~~~~gw~ 347 (703)
T PRK15489 341 WEQMGWR 347 (703)
T ss_pred HHHhCCC
Confidence 7766553
No 12
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=100.00 E-value=1.6e-33 Score=271.04 Aligned_cols=228 Identities=23% Similarity=0.322 Sum_probs=178.8
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhH
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGA 162 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~a 162 (513)
|.|||+||+|||++.+.++|+|+++|+||+.+++|+ |+|+|+|+|.+.+ ++... ....+++++. .+.+.||+.|
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~-~~~~~---~~~~~i~~~~-~~~~~G~~~a 75 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAA-RALRL---PSIFRVVVVP-PSQPRTKPKA 75 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHH-HHhcc---CCCeeEEEec-CCCCCchHHH
Confidence 789999999999999999999999999997656554 4567999998754 32211 0123344442 2345579999
Q ss_pred HHHHhhhcc-----cccCCh---HHHHHHHHHHhhcC-CCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhc
Q 040333 163 LKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQN-SDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSAT 233 (513)
Q Consensus 163 ln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~-~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (513)
+|.|++.+. ++|+|. |+++.+++..+.++ +++++++++....+...++..+....++...+..........
T Consensus 76 ~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (241)
T cd06427 76 CNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFARLDDKLACVQAPLNYYNARENWLTRMFALEYAAWFDYLLPGLARL 155 (241)
T ss_pred HHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHHhcCCCEEEEeCceEeeCCCccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999985 469998 99999999999654 799999999887776666666655444443333322333334
Q ss_pred cCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchhHHH
Q 040333 234 HAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLF 313 (513)
Q Consensus 234 ~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~ 313 (513)
+....++|+++++||++++++|||++...+||+|++.|+.++|+++.+++.. ++++.|.|++.+.+||.||.+|.+|.+
T Consensus 156 ~~~~~~~g~~~~~rr~~~~~vgg~~~~~~~eD~~l~~rl~~~G~r~~~~~~~-~~~~~~~~~~~~~~q~~Rw~~g~~~~~ 234 (241)
T cd06427 156 GLPIPLGGTSNHFRTDVLRELGGWDPFNVTEDADLGLRLARAGYRTGVLNST-TLEEANNALGNWIRQRSRWIKGYMQTW 234 (241)
T ss_pred CCeeecCCchHHhhHHHHHHcCCCCcccchhhHHHHHHHHHCCceEEEeccc-ccccCcHhHHHHHHHHHHHhccHHHHH
Confidence 4445567999999999999999999877899999999999999999999885 578999999999999999999999998
Q ss_pred HHhh
Q 040333 314 RKMV 317 (513)
Q Consensus 314 ~~~~ 317 (513)
..|.
T Consensus 235 ~~~~ 238 (241)
T cd06427 235 LVHM 238 (241)
T ss_pred HHHh
Confidence 7763
No 13
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=2.8e-33 Score=269.08 Aligned_cols=222 Identities=24% Similarity=0.294 Sum_probs=178.9
Q ss_pred EEEEEecCCChH-HHHHHHHHHHc----CCC-CCCceEEEEEcCCCcHHHHHHHH----HHHHHHhhcCCcEEEEEecCC
Q 040333 86 VLIQIPMFNEKE-VYKISIGAACG----LSW-PSDRLVIQVLDDSTDPAIKQMVE----QECQRWAAKGINIRYQIRENR 155 (513)
Q Consensus 86 VsIiIP~yNE~~-~l~~~l~sl~~----q~y-p~~~~~I~V~DdstD~t~~~l~~----~~~~~~~~~~~~i~~i~~~~~ 155 (513)
|||+||+|||+. .+.++|++.++ |+| |+ ++|+|+||++|++.....+ +++++++. +.+++++++.++
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~--~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~-~~~v~~~~r~~~ 77 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADH--FDFFILSDTRDPDIWLAEEAAWLDLCEELGA-QGRIYYRRRREN 77 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCc--eEEEEECCCCChHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCC
Confidence 699999999995 49999999875 777 54 5567889999987653332 25555544 789999999998
Q ss_pred CCCchhHHHHHhhh--cc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhH
Q 040333 156 TGYKAGALKEGLKR--SY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKV 225 (513)
Q Consensus 156 ~g~Ka~aln~gl~~--a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 225 (513)
.|.|++++|.++.. +. ++|||. ||+|.+++++|.+||++++||+++...|. .++++++|+.+.......
T Consensus 78 ~g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n~-~~~~~~~~~~~~~~~~~~ 156 (254)
T cd04191 78 TGRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIGA-ETLFARLQQFANRLYGPV 156 (254)
T ss_pred CCccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeECC-CCHHHHHHHHHHHHHHHH
Confidence 89999999999976 32 579999 99999999999779999999999999997 478999987764333222
Q ss_pred HHHhhhhc-cCcccccccchHhhHHHHHHh---------CCcCCCCccchHHHHHHHHhCCCeEEEeccce-ecccCCcC
Q 040333 226 EQEVGSAT-HAFFGFNGTAGVWRIAAINEA---------GGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQ-VKSELPST 294 (513)
Q Consensus 226 ~~~~~~~~-~~~~~~~G~~~~~Rr~~l~~~---------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~~~p~t 294 (513)
.+.+.... ++...+.|+++++||++++++ |+|++++++||++++.+++++||+++|.|++. ++++.|++
T Consensus 157 ~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~~~~~~~p~~ 236 (254)
T cd04191 157 FGRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLEGSYEECPPT 236 (254)
T ss_pred HHHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCcceEeECCCC
Confidence 22222221 233346799999999999884 34666789999999999999999999999987 58889999
Q ss_pred HHHHHHHHHHhhhchhH
Q 040333 295 FKAFRFQQHRWSCGPAN 311 (513)
Q Consensus 295 ~~~~~~Qr~RW~~G~~~ 311 (513)
++++++||.||++|++|
T Consensus 237 ~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 237 LIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred HHHHHHHHHHHHhhcCc
Confidence 99999999999999886
No 14
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=100.00 E-value=1e-32 Score=264.40 Aligned_cols=224 Identities=28% Similarity=0.516 Sum_probs=176.0
Q ss_pred EEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHH
Q 040333 87 LIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKE 165 (513)
Q Consensus 87 sIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~ 165 (513)
||+||+|||+ +.++++++|+.+|+||+.+++| |+|+|+|+|....+++.+++. +.+++++...++.|+|++|+|.
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiV-vdd~s~D~t~~~~i~~~~~~~---~~~i~~i~~~~~~G~~~~a~n~ 76 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIV-IDNNTKDEALWKPVEAHCAQL---GERFRFFHVEPLPGAKAGALNY 76 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEE-EeCCCCchhHHHHHHHHHHHh---CCcEEEEEcCCCCCCchHHHHH
Confidence 6999999998 7999999999999999877644 777899998744455544432 4567777666566779999999
Q ss_pred Hhhhcc-------cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccC
Q 040333 166 GLKRSY-------VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHA 235 (513)
Q Consensus 166 gl~~a~-------v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (513)
|++.+. ++|+|. |++|.+++..+ +++++++|+++....+...+.+.+.....+...+......... ..
T Consensus 77 g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 154 (236)
T cd06435 77 ALERTAPDAEIIAVIDADYQVEPDWLKRLVPIF-DDPRVGFVQAPQDYRDGEESLFKRMCYAEYKGFFDIGMVSRNE-RN 154 (236)
T ss_pred HHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHh-cCCCeeEEecCccccCCCccHHHHHHhHHHHHHHHHHhccccc-cC
Confidence 999862 469998 99999999998 6889999998765555444455443332222222222111111 11
Q ss_pred cccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchhHHHHH
Q 040333 236 FFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRK 315 (513)
Q Consensus 236 ~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~ 315 (513)
.....|+++++||++++++|||++....||.+++.|+.++||++.++|++.+++..|.++.++.+||.||..|.+|.+++
T Consensus 155 ~~~~~g~~~~~rr~~~~~iGgf~~~~~~eD~dl~~r~~~~G~~~~~~~~~~~~~~~~~~~~~~~~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 155 AIIQHGTMCLIRRSALDDVGGWDEWCITEDSELGLRMHEAGYIGVYVAQSYGHGLIPDTFEAFKKQRFRWAYGAVQILKK 234 (236)
T ss_pred ceEEecceEEEEHHHHHHhCCCCCccccchHHHHHHHHHCCcEEEEcchhhccCcCcccHHHHHHHHHHHhcchhhhhhc
Confidence 22356889999999999999999988899999999999999999999999999999999999999999999999999987
Q ss_pred h
Q 040333 316 M 316 (513)
Q Consensus 316 ~ 316 (513)
|
T Consensus 235 ~ 235 (236)
T cd06435 235 H 235 (236)
T ss_pred c
Confidence 6
No 15
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=100.00 E-value=1.7e-31 Score=272.82 Aligned_cols=223 Identities=20% Similarity=0.297 Sum_probs=169.1
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC--C
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTG--Y 158 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g--~ 158 (513)
+..|+|||+||+|||++.+++||+|+++|+||++|++| ++|+|+|+|.+ +++++.++++ +.+++++..+++.| +
T Consensus 38 ~~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIiv-vdd~s~D~t~~-iv~~~~~~~p--~~~i~~v~~~~~~G~~~ 113 (373)
T TIGR03472 38 RAWPPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLF-GVQDPDDPALA-VVRRLRADFP--DADIDLVIDARRHGPNR 113 (373)
T ss_pred CCCCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEE-EeCCCCCcHHH-HHHHHHHhCC--CCceEEEECCCCCCCCh
Confidence 44799999999999999999999999999999866544 66778888876 5555444331 23577675444333 5
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhh
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVG 230 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (513)
|.+|++.+++.++ +.|+|. ||+|+++++.+ ++|++++|++.....+ ..++.++......+..+.......
T Consensus 114 K~~~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~-~~~~v~~V~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~ 191 (373)
T TIGR03472 114 KVSNLINMLPHARHDILVIADSDISVGPDYLRQVVAPL-ADPDVGLVTCLYRGRP-VPGFWSRLGAMGINHNFLPSVMVA 191 (373)
T ss_pred HHHHHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHh-cCCCcceEeccccCCC-CCCHHHHHHHHHhhhhhhHHHHHH
Confidence 8889998888874 469999 99999999999 7899999999755333 345666655443332222111111
Q ss_pred hhccCcccccccchHhhHHHHHHhCCcCC--CCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhc
Q 040333 231 SATHAFFGFNGTAGVWRIAAINEAGGWKD--RTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCG 308 (513)
Q Consensus 231 ~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 308 (513)
...+......|+++++||++++++|||++ +.++||++++.++.++|+++.+.|+++..+..|+|++++++||.||.++
T Consensus 192 ~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~~~~ED~~l~~~i~~~G~~v~~~~~~v~~~~~~~s~~~~~~q~~RW~r~ 271 (373)
T TIGR03472 192 RALGRARFCFGATMALRRATLEAIGGLAALAHHLADDYWLGELVRALGLRVVLAPVVVDTDVHETSFATLLAHELRWSRT 271 (373)
T ss_pred HhccCCccccChhhheeHHHHHHcCChHHhcccchHHHHHHHHHHHcCCeEEecchhhhcCCCccCHHHHHHHHHHHHhh
Confidence 12222233569999999999999999986 4568999999999999999999999888888889999999999999866
Q ss_pred h
Q 040333 309 P 309 (513)
Q Consensus 309 ~ 309 (513)
.
T Consensus 272 ~ 272 (373)
T TIGR03472 272 I 272 (373)
T ss_pred h
Confidence 3
No 16
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=3.4e-30 Score=246.20 Aligned_cols=222 Identities=26% Similarity=0.427 Sum_probs=169.2
Q ss_pred CeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchh
Q 040333 84 PVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAG 161 (513)
Q Consensus 84 P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~ 161 (513)
|+|||+||+|||+ +.++++|+|+++|+||+.+++|+ |+|+|+|+|.+ +++.+.. + .+++++..+++.++|++
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~-~~~~~~~----~-~~~~~~~~~~~~~~~~~ 74 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRA-LAAELGV----E-YGYRYLTRPDNRHAKAG 74 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHH-HHHHhhc----c-cCceEEEeCCCCCCcHH
Confidence 6899999999987 78999999999999998534444 55567777766 4444322 2 25677766767778999
Q ss_pred HHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCc-HHHHHHHhhhhhhhhHHHHhhhh
Q 040333 162 ALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANEC-LLTRMQEMSLDYHFKVEQEVGSA 232 (513)
Q Consensus 162 aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (513)
++|.|++.+. ++|+|. |+++++++..+.+++++++|++.....+.+.. ...+...................
T Consensus 75 ~~n~~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (234)
T cd06421 75 NLNNALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDDPKVALVQTPQFFYNPDPFDWLADGAPNEQELFYGVIQPGRDR 154 (234)
T ss_pred HHHHHHHhCCCCEEEEEccccCcCccHHHHHHHHHhcCCCeEEEecceEEecCCcchhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999884 468888 99999999999666999999998776665432 12221111111111111111111
Q ss_pred ccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchhHH
Q 040333 233 THAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANL 312 (513)
Q Consensus 233 ~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~ 312 (513)
.....+.|+++++||++++++|||++....||++++.|+.++|+++.+.|++.++++.|.+++++.+|+.||.+|.+|.
T Consensus 155 -~~~~~~~g~~~~~r~~~~~~ig~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~~~~~~~ 233 (234)
T cd06421 155 -WGAAFCCGSGAVVRREALDEIGGFPTDSVTEDLATSLRLHAKGWRSVYVPEPLAAGLAPETLAAYIKQRLRWARGMLQI 233 (234)
T ss_pred -cCCceecCceeeEeHHHHHHhCCCCccceeccHHHHHHHHHcCceEEEecCccccccCCccHHHHHHHHHHHhcCCeee
Confidence 2233456899999999999999999888899999999999999999999999999999999999999999999998763
No 17
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.97 E-value=9.7e-32 Score=256.15 Aligned_cols=218 Identities=28% Similarity=0.421 Sum_probs=144.3
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC--Cchh
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTG--YKAG 161 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g--~Ka~ 161 (513)
|+|+|+||+|||++.+.++|+|+++|+||+.+++| |+|+++|++.+ ..++.+++++ ..++++++.+++.| +|++
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~v-vd~~~~~~~~~-~~~~~~~~~~--~~~v~vi~~~~~~g~~~k~~ 76 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVV-VDDGSDDETAE-ILRALAARYP--RVRVRVIRRPRNPGPGGKAR 76 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEE-EEE-SSS-GCT-THHHHHHTTG--G-GEEEEE----HHHHHHHH
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEE-EECCCChHHHH-HHHHHHHHcC--CCceEEeecCCCCCcchHHH
Confidence 78999999999999999999999999997755443 55567777765 4444444432 23567776654444 6999
Q ss_pred HHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhc
Q 040333 162 ALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSAT 233 (513)
Q Consensus 162 aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (513)
|+|.|++.+. ++|+|. |++|+++++++ ++|++++|++.....+ +.++++..+...+...+..........
T Consensus 77 a~n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~-~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (228)
T PF13641_consen 77 ALNEALAAARGDYILFLDDDTVLDPDWLERLLAAF-ADPGVGAVGGPVFPDN-DRNWLTRLQDLFFARWHLRFRSGRRAL 154 (228)
T ss_dssp HHHHHHHH---SEEEEE-SSEEE-CHHHHHHHHHH-HBSS--EEEEEEEETT-CCCEEEE-TT--S-EETTTS-TT-B--
T ss_pred HHHHHHHhcCCCEEEEECCCcEECHHHHHHHHHHH-HhCCCCeEeeeEeecC-CCCHHHHHHHHHHhhhhhhhhhhhccc
Confidence 9999999885 479999 99999999999 8999999999986665 455555444333222222111222222
Q ss_pred cCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhc
Q 040333 234 HAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCG 308 (513)
Q Consensus 234 ~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 308 (513)
...+++|+++++||++++++|||++...+||.+++.|+.++||++.|+|++.++++.|.|++++.+||.||.+|
T Consensus 155 -~~~~~~G~~~~~rr~~~~~~g~fd~~~~~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~~~~~~~~~q~~RW~~g 228 (228)
T PF13641_consen 155 -GVAFLSGSGMLFRRSALEEVGGFDPFILGEDFDLCLRLRAAGWRIVYAPDALVYHEEPSSLKAFFKQRFRWSRG 228 (228)
T ss_dssp ---S-B--TEEEEEHHHHHHH-S--SSSSSHHHHHHHHHHHTT--EEEEEEEEEEE--SSSTHHHHHHHHHHH--
T ss_pred -ceeeccCcEEEEEHHHHHHhCCCCCCCcccHHHHHHHHHHCCCcEEEECCcEEEEeCCCCHHHHHHHHhccCcC
Confidence 23446799999999999999999997779999999999999999999999999999999999999999999987
No 18
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.97 E-value=2.8e-30 Score=240.45 Aligned_cols=183 Identities=22% Similarity=0.342 Sum_probs=153.1
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC--Cchh
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTG--YKAG 161 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g--~Ka~ 161 (513)
|.|||+||+|||++.++++|+|+++|+||+.+++| |+|+|+|+|.+ .++++.++++ ..+++++..+++.| +|++
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiiv-Vdd~s~d~t~~-~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~ 76 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYEILF-CVQDEDDPAIP-VVRKLIAKYP--NVDARLLIGGEKVGINPKVN 76 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCCeEEEE-EeCCCcchHHH-HHHHHHHHCC--CCcEEEEecCCcCCCCHhHH
Confidence 67999999999999999999999999999866554 77889999977 4444443321 23455665444433 4778
Q ss_pred HHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhc
Q 040333 162 ALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSAT 233 (513)
Q Consensus 162 aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (513)
|+|.|++.+. ++|+|. |++|++++..+ .++++++|++.
T Consensus 77 ~~n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~--------------------------------- 122 (196)
T cd02520 77 NLIKGYEEARYDILVISDSDISVPPDYLRRMVAPL-MDPGVGLVTCL--------------------------------- 122 (196)
T ss_pred HHHHHHHhCCCCEEEEECCCceEChhHHHHHHHHh-hCCCCCeEEee---------------------------------
Confidence 8999999884 469999 99999999998 68899999876
Q ss_pred cCcccccccchHhhHHHHHHhCCcCCC--CccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhc
Q 040333 234 HAFFGFNGTAGVWRIAAINEAGGWKDR--TTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCG 308 (513)
Q Consensus 234 ~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 308 (513)
+..|+++++||++++++|||+.. ..+||++++.|+.++|+++.++|++.++++.|.+++++++||.||.+.
T Consensus 123 ----~~~g~~~~~r~~~~~~~ggf~~~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~~~~~~~~~~q~~rw~~~ 195 (196)
T cd02520 123 ----CAFGKSMALRREVLDAIGGFEAFADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLGSTSLASFWRRQLRWSRT 195 (196)
T ss_pred ----cccCceeeeEHHHHHhccChHHHhHHHHHHHHHHHHHHHcCCeEEEcchheeccCCcccHHHHHHHHHHHhcc
Confidence 34689999999999999999763 358999999999999999999999999999999999999999999875
No 19
>PLN02893 Cellulose synthase-like protein
Probab=99.97 E-value=9.2e-28 Score=252.75 Aligned_cols=252 Identities=21% Similarity=0.284 Sum_probs=187.9
Q ss_pred CCCCCeEEEEEec---CCCh-HHHHHHHHHHHcCCCCCCceEEEEEcC-CCcHHHHHHHHHH---------HH-------
Q 040333 80 SSNFPVVLIQIPM---FNEK-EVYKISIGAACGLSWPSDRLVIQVLDD-STDPAIKQMVEQE---------CQ------- 138 (513)
Q Consensus 80 ~~~~P~VsIiIP~---yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~Dd-stD~t~~~l~~~~---------~~------- 138 (513)
.+++|.|.|.|++ +.|+ -...+|+-|+++.|||.+++-++|.|| ++.-|.+.+.|+. |+
T Consensus 97 ~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~WvPFCrk~~ie~R 176 (734)
T PLN02893 97 ESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVER 176 (734)
T ss_pred cccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHhhcccccccCCCcC
Confidence 3569999999999 6677 588899999999999999999999988 4444554444410 00
Q ss_pred ------------------------------------------HHh-----------------------------------
Q 040333 139 ------------------------------------------RWA----------------------------------- 141 (513)
Q Consensus 139 ------------------------------------------~~~----------------------------------- 141 (513)
++.
T Consensus 177 ~P~~YF~~~~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~~~~dH~~ivqV~l~~~~~~ 256 (734)
T PLN02893 177 CPEAYFSSNSHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQDHPTVIQVLLESGKDK 256 (734)
T ss_pred CHHHHhccCCCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCCCCCCCCceeeeeccCCCcc
Confidence 000
Q ss_pred ----hcCCcEEEEEecCCC----CCchhHHHHHhhhcc---------cccCCh----HHHHHHHHHHhhcCC----CeEE
Q 040333 142 ----AKGINIRYQIRENRT----GYKAGALKEGLKRSY---------VKHCEY----PDYLRRAIPYLVQNS----DIAL 196 (513)
Q Consensus 142 ----~~~~~i~~i~~~~~~----g~Ka~aln~gl~~a~---------v~DaD~----pd~L~~lv~~~~~~~----~v~~ 196 (513)
..-+++.|++|++|+ +.||||+|.+++.+- ++|||+ |+++++.+.+| .|| +++.
T Consensus 257 d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff-~Dp~~~~~vaf 335 (734)
T PLN02893 257 DITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYL-LDPSMDPKLGY 335 (734)
T ss_pred chhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHh-cCCCcCCceEE
Confidence 012345677777774 579999999999742 479999 78999999999 565 7999
Q ss_pred EeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHH---------H--------------
Q 040333 197 VQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAIN---------E-------------- 253 (513)
Q Consensus 197 V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~---------~-------------- 253 (513)
||.++++.|.+.+-. ...+....+...+.+.+..++. .+.|+++++||+++. +
T Consensus 336 VQfPQ~F~~i~~~D~---y~~~~~vff~~~~~glDG~~gp-~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~~~~ 411 (734)
T PLN02893 336 VQFPQIFHGINKNDI---YAGELKRLFQINMIGMDGLAGP-NYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVDKSI 411 (734)
T ss_pred EeCcccccCCCcCCC---CcchhHHHHHHHhhcccccCCc-eeeccceEEEHHHhcCCCccccchhhhhccccccccccc
Confidence 999999877654311 0112223345555555555554 467999999999993 0
Q ss_pred -------------------------hCCcCCCCccchHHHHHHHHhCCCeEEEec--cceecccCCcCHHHHHHHHHHhh
Q 040333 254 -------------------------AGGWKDRTTVEDMDLAVRASLKGWKFVYLG--DLQVKSELPSTFKAFRFQQHRWS 306 (513)
Q Consensus 254 -------------------------~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~ 306 (513)
.+||..++++||++.+++++.+|||.+|++ .....+..|.|+.+++.||.||+
T Consensus 412 ~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa 491 (734)
T PLN02893 412 KSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWS 491 (734)
T ss_pred chHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHhcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHH
Confidence 246777889999999999999999999985 34457999999999999999999
Q ss_pred hchhHHHHH-hhHhHhhcCCCChhHHHHHHH
Q 040333 307 CGPANLFRK-MVMEIIRNKKVKFWKKVYVIY 336 (513)
Q Consensus 307 ~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 336 (513)
.|.+|++.. +-+-....+++++.+|+.++.
T Consensus 492 ~G~lqI~~s~~nPl~~g~~~L~~~Qrl~Y~~ 522 (734)
T PLN02893 492 VGLLEVAFSKYSPITFGVKSIGLLMGLGYAH 522 (734)
T ss_pred hhhHHHHhhccCchhhcccCCCHHHHHHHHH
Confidence 999999754 323333347899999998765
No 20
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.97 E-value=1.3e-30 Score=250.96 Aligned_cols=196 Identities=18% Similarity=0.207 Sum_probs=161.7
Q ss_pred EEEecCCCh-HHHHHHHHHHHcCCCC--------CCceEEEE-EcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC
Q 040333 88 IQIPMFNEK-EVYKISIGAACGLSWP--------SDRLVIQV-LDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTG 157 (513)
Q Consensus 88 IiIP~yNE~-~~l~~~l~sl~~q~yp--------~~~~~I~V-~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g 157 (513)
|+||+|||+ .+|+++|+|+++|+|| .++++|+| +|||+| .+.
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d----------------------------~~~ 52 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK----------------------------KNR 52 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc----------------------------ccC
Confidence 689999997 7999999999999999 56666655 567888 112
Q ss_pred Cchh-------HHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhh
Q 040333 158 YKAG-------ALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYH 222 (513)
Q Consensus 158 ~Ka~-------aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 222 (513)
||.. ++|.++..+. ++|+|. ||+|++++.+|.++|++++|+|.....|.+.+++++.|..++...
T Consensus 53 gk~~~~~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~ 132 (244)
T cd04190 53 GKRDSQLWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKDPEIGGVCGEIHPMGKKQGPLVMYQVFEYAIS 132 (244)
T ss_pred cchHHHHHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhCCCEEEEEeeeEEcCCcchhHHHhHheehhhh
Confidence 2443 4566665443 479999 999999999997799999999999888877788999988877654
Q ss_pred hhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCC--------------------CCccchHHHHHHHHhCCCeEEE-
Q 040333 223 FKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKD--------------------RTTVEDMDLAVRASLKGWKFVY- 281 (513)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--------------------~~~~ED~~l~~rl~~~G~ki~~- 281 (513)
....+...+..+...+.+|++.++|++++++.|++.. ..++||.+++.++.++||++.|
T Consensus 133 ~~~~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~ 212 (244)
T cd04190 133 HWLDKAFESVFGFVTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKYL 212 (244)
T ss_pred hhhcccHHHcCCceEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccEEE
Confidence 4444445566677778899999999999999976543 1368999999999999999999
Q ss_pred -eccceecccCCcCHHHHHHHHHHhhhchhH
Q 040333 282 -LGDLQVKSELPSTFKAFRFQQHRWSCGPAN 311 (513)
Q Consensus 282 -~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~ 311 (513)
+|++.++++.|+|++++++||.||.+|.+.
T Consensus 213 ~~~~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 213 YVPGAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred EecccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 999999999999999999999999999753
No 21
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.97 E-value=3.5e-28 Score=250.17 Aligned_cols=352 Identities=14% Similarity=0.205 Sum_probs=223.8
Q ss_pred CCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCC-ceEEEEEcC-----CCc-HHHHHHHHHHHH-----------H---
Q 040333 82 NFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSD-RLVIQVLDD-----STD-PAIKQMVEQECQ-----------R--- 139 (513)
Q Consensus 82 ~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~-~~~I~V~Dd-----stD-~t~~~l~~~~~~-----------~--- 139 (513)
..+.+-.+||||||. +.++++|+|+..++||+. +++++|+|| ++| .|.+.+.+.+.+ .
T Consensus 23 ~~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l~~~~~~~~~~~~~~~~~~~~ 102 (527)
T PF03142_consen 23 PDKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVLDILGDFVDPPEDPEPLSYVS 102 (527)
T ss_pred CCceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHHHhhcccCCCcCCCCCcceEE
Confidence 445688899999998 899999999999999986 566667787 344 455544442220 0
Q ss_pred -----------------HhhcC-----------CcEEEEEe----------cCCCCCchhHHHHHhhhc-----------
Q 040333 140 -----------------WAAKG-----------INIRYQIR----------ENRTGYKAGALKEGLKRS----------- 170 (513)
Q Consensus 140 -----------------~~~~~-----------~~i~~i~~----------~~~~g~Ka~aln~gl~~a----------- 170 (513)
|...+ ....++.. .+.|.||.+.+-..+...
T Consensus 103 ~~~g~~~~n~~~vy~g~y~~~~~~~~~~~~~~~vp~~~vvk~g~~~e~~~~k~~NrGKRDsq~~~~~fl~~~~~~~~~~~ 182 (527)
T PF03142_consen 103 LGEGSKQHNMAKVYSGFYEYDGDSHVPPEKQQRVPYIVVVKCGTPSERSSPKPGNRGKRDSQILLMSFLNKVHFNNPMTP 182 (527)
T ss_pred eccCchhhcCEEEEEEEEecCCccccccccccccCEEEEEEcCChHHhcccccccCCchHHHHHHHHHHHHHhcCCCCch
Confidence 00001 11111111 123446766543222111
Q ss_pred ---------------------c--cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhh
Q 040333 171 ---------------------Y--VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFK 224 (513)
Q Consensus 171 ---------------------~--v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~ 224 (513)
+ ..|||. ||++.+++..+.+||++++|+|.....|...++++..|.++|...+.
T Consensus 183 ~~~e~~~~i~~~~g~~~~~~~~il~~DaDt~~~p~~~~~lv~~m~~d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~ 262 (527)
T PF03142_consen 183 LELELFHQIWNIIGVDPDFYEYILMVDADTKFDPDSVNRLVDAMERDPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHH 262 (527)
T ss_pred HHHHHHHHHHHHhccCccceEEEEEecCCceEcHHHHHHHHHHHcCCCCeEEEeceeEEcCCCCCHhhheeccchhHHHH
Confidence 0 259999 99999999999899999999999999999899999999999999999
Q ss_pred HHHHhhhhccCcccccccchHhhHHHHHHh--------------CCcCC---------C--CccchHHHHHHHHhC--CC
Q 040333 225 VEQEVGSATHAFFGFNGTAGVWRIAAINEA--------------GGWKD---------R--TTVEDMDLAVRASLK--GW 277 (513)
Q Consensus 225 ~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~--------------Gg~~~---------~--~~~ED~~l~~rl~~~--G~ 277 (513)
..+..++..|.+.|++|++.++|-++.+.- .+|.+ . .++||..|+..+.++ |+
T Consensus 263 l~Ka~Es~fG~VtCLPGcfsmyR~~a~~~~~~~~~p~l~~~~i~~~Y~~~~~dtlh~~nl~~lGEDR~LttLlLk~~~~~ 342 (527)
T PF03142_consen 263 LQKAFESVFGSVTCLPGCFSMYRISALMDGDGYWVPLLISPDIIEKYSENPVDTLHQKNLLDLGEDRWLTTLLLKQFPGY 342 (527)
T ss_pred HHHHHHHHhCceeecCCcceeeeeehhccccccccccccchHHHHHHhhccchHHHHHhhhhcchhHHHHHHHHhhCCCc
Confidence 999999999999999999999998887651 11211 1 359999999988887 79
Q ss_pred eEEEeccceecccCCcCHHHHHHHHHHhhhchhHHHHHhhH--hHhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 040333 278 KFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVM--EIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYC 355 (513)
Q Consensus 278 ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 355 (513)
|+.|+|++.+++.+|+|++.+++||+||..|++.+...... ++.. ...+..++-. ..-++..++.|....+..
T Consensus 343 k~~y~~~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~eLl~~~~l~g--~~~fsm~fvv--fi~Li~tiI~P~ti~~iI- 417 (527)
T PF03142_consen 343 KTEYVPSAVAYTDAPETFSVFLSQRRRWINSTIHNLFELLLVRDLCG--FCCFSMRFVV--FIDLIGTIILPATIVFII- 417 (527)
T ss_pred eEEEcccccccccCCccHHHHHHHhhhccchhHhhHhHHHHhhhhcc--eeeecHHHHH--HHHHHHHHHHHHHHHHHH-
Confidence 99999999999999999999999999999999876543311 1111 1111111111 111222233333211111
Q ss_pred HHHhhHhhcCCchhhHHHHHHHHHHHHHH--HHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeecccc
Q 040333 356 VVLPLTILVPEVQVPIWGAVYIPSIITIL--NSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKL 433 (513)
Q Consensus 356 ~~~p~~~l~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~~~a~~~gl~~~g~~~~w~~T~k~ 433 (513)
.++-..+ ......+.+.++++..++.+. ..+...+.+..+...++|.....+++..-.+++++... +-+|+.|++.
T Consensus 418 ylIv~~I-~~s~~~piIsLiLLAiIyGL~aIl~iL~~r~wq~i~wmiiYll~~P~~n~vLpiYSfwn~D-DFSWGtTR~v 495 (527)
T PF03142_consen 418 YLIVVSI-FSSDPVPIISLILLAIIYGLPAILFILRSRRWQYIGWMIIYLLALPFFNFVLPIYSFWNFD-DFSWGTTRVV 495 (527)
T ss_pred HHhheeh-cccccccchHHHHHHHHHHHHhhhheecccHHHHHHHHHHHHHHHHHHHhHhhheeEEEec-ccccCCeeee
Confidence 1111111 111122222222222222221 12223344443333335555566777777777777655 4599999987
Q ss_pred Ccccccc
Q 040333 434 GDALKNK 440 (513)
Q Consensus 434 ~~~~~~~ 440 (513)
..+++++
T Consensus 496 ~ge~~k~ 502 (527)
T PF03142_consen 496 VGEKGKK 502 (527)
T ss_pred ccccccc
Confidence 7665433
No 22
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.96 E-value=8.2e-27 Score=230.11 Aligned_cols=365 Identities=19% Similarity=0.258 Sum_probs=251.0
Q ss_pred CeEEEEEecCCCh-----HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHH----HHHHHhhcCCcEEEEEecC
Q 040333 84 PVVLIQIPMFNEK-----EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQ----ECQRWAAKGINIRYQIREN 154 (513)
Q Consensus 84 P~VsIiIP~yNE~-----~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~----~~~~~~~~~~~i~~i~~~~ 154 (513)
....|++|+|||+ ..++.+-+|+.+...- ..+.++|+.||+|+......++ +|++... ..+|.|.+|.+
T Consensus 144 hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~-~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g-~~~ifYRrRr~ 221 (736)
T COG2943 144 HRTAILMPIYNEDVNRVFAGLRATYESLAATGHA-EHFDFFVLSDSRDPDIALAEQKAWAELCRELGG-EGNIFYRRRRR 221 (736)
T ss_pred cceeEEeeccccCHHHHHHHHHHHHHHHHhhCCc-ccceEEEEcCCCCchhhhhHHHHHHHHHHHhCC-CCceeeehHhh
Confidence 3489999999999 3678888898876544 5677889999999987733332 4555432 35899998888
Q ss_pred CCCCchhHHHHHhhh-----cc--cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhh-h
Q 040333 155 RTGYKAGALKEGLKR-----SY--VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYH-F 223 (513)
Q Consensus 155 ~~g~Ka~aln~gl~~-----a~--v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~-~ 223 (513)
+.+.|+||+..-.+. .+ |+|||. +|++.++++.++.||+.|++|+.....|. .+++.|+|++.-... -
T Consensus 222 n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME~~P~aGlIQt~P~~~gg-~TL~AR~qQFatrvYGp 300 (736)
T COG2943 222 NVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLMEANPDAGLIQTSPKASGG-DTLYARCQQFATRVYGP 300 (736)
T ss_pred hhcccccCHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHhhCCCCceeecchhhcCc-chHHHHHHHHHHHHhch
Confidence 888899998764433 22 789999 99999999999999999999999999987 568999887642211 1
Q ss_pred hHHHHhhhhccCcccccccchHhhHHHHHHhCC---------cCCCCccchHHHHHHHHhCCCeEEEeccce-ecccCCc
Q 040333 224 KVEQEVGSATHAFFGFNGTAGVWRIAAINEAGG---------WKDRTTVEDMDLAVRASLKGWKFVYLGDLQ-VKSELPS 293 (513)
Q Consensus 224 ~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg---------~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~-~~~~~p~ 293 (513)
.......-..++-..+.|+|.++|.+++.+.-| |.+..+++|+--+..+++.||.+...++.- .++|.|+
T Consensus 301 l~~~GLawW~~~Es~yWGHNAIIRt~aF~~hcgLp~LpG~~pFgG~ilSHDfvEAALmRRaGW~v~ia~dL~GSyEE~Pp 380 (736)
T COG2943 301 LFTAGLAWWQLGESHYWGHNAIIRTKAFIEHCGLPPLPGRGPFGGHILSHDFVEAALMRRAGWGVWIAYDLDGSYEELPP 380 (736)
T ss_pred HHhhhhHHHhccccccccccceeechhhHHhcCCCCCCCCCCCCccccchHHHHHHHHhhcCceEEEeccCCCchhhCCc
Confidence 111111112233345779999999999998644 444556999999999999999999888876 6789999
Q ss_pred CHHHHHHHHHHhhhchhHHHHHhhHhHhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHhhHhhc
Q 040333 294 TFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFY---------CVVLPLTILV 364 (513)
Q Consensus 294 t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------~~~~p~~~l~ 364 (513)
|+-++.++.+||++|++|.++ ++..+++++..|.+++.+.. .++.+|+..++.. -+.-|-.+..
T Consensus 381 nLlD~l~RDRRWC~GNLqh~r-----l~~~~GlHwvsR~h~~tGVm--sYlsaPlWfl~ll~g~al~~~~~l~~p~yFt~ 453 (736)
T COG2943 381 NLLDELKRDRRWCHGNLQHFR-----LFLVKGLHWVSRAHFLTGVM--SYLSAPLWFLFLLLGTALQAVHALTEPQYFTQ 453 (736)
T ss_pred hHHHHHhhhhHhhhcchhhce-----eeccCCccHHHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHhHhhhchhhhcC
Confidence 999999999999999999765 56778999999999876532 2233343322111 1111222221
Q ss_pred CCchhhH----------------HHHHHHHHHHHHHHHhccc---hh---HHH--------HHHHHHHHHHHHHHHHHHH
Q 040333 365 PEVQVPI----------------WGAVYIPSIITILNSVGTP---RS---IHL--------LFYWILFENVMSLHRTKAT 414 (513)
Q Consensus 365 ~~~~~~~----------------~~~~~l~~~~~~~~~~~~~---~~---~~~--------~~~~~~~~~~~s~~~~~a~ 414 (513)
|....|. ..++++|.+++++..+.++ |. ... +.+..+..+++-+..+.++
T Consensus 454 p~qlfp~wp~~~~~~a~~lf~~Tm~lLf~PKil~~~ll~~k~~~~k~~GG~~Rv~ls~~lE~llSaL~APv~Ml~htr~V 533 (736)
T COG2943 454 PRQLFPVWPQWRPELAIALFAITMVLLFLPKLLSILLLWAKKGGTKEFGGALRVTLSLLLEVLLSALLAPVRMLFHTRFV 533 (736)
T ss_pred hHhhcCCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHcCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111111 1245666666666555431 11 111 1233455555667779999
Q ss_pred HHHHHhcCCCCceeeccccCcccccchhhhhcccCCCCCCCCcccccchhHHHHHHHHHHHHHHH
Q 040333 415 FIGLLEAGRANEWVVTEKLGDALKNKAADAKNKTNTKAPKKPKIKFAERMHTLELGFGVFLFFCG 479 (513)
Q Consensus 415 ~~gl~~~g~~~~w~~T~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 479 (513)
++.++ |++..|...+| |+.+.+|++.. +-|-.+.++|+.+...+
T Consensus 534 v~~l~--G~~~gW~sq~R-------Dd~~~~w~ea~------------~rhg~~~llGl~~~al~ 577 (736)
T COG2943 534 VSALL--GWDVGWNSQQR-------DDDSTSWGEAL------------RRHGWQSLLGLLWAALA 577 (736)
T ss_pred HHHHh--ccccCcCCCCC-------CCCCCCHHHHH------------HHcccHHHHHHHHHHHH
Confidence 99999 99999998887 33344666643 44666777777665443
No 23
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.96 E-value=6.7e-28 Score=230.70 Aligned_cols=214 Identities=18% Similarity=0.228 Sum_probs=168.3
Q ss_pred eEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHH
Q 040333 85 VVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGAL 163 (513)
Q Consensus 85 ~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~al 163 (513)
.|||+||+|||+ +.+++||+|+.+|+ | .+++| |+|+|+|++.+.+.+. .....++++. .+++||++|+
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~-~-~eiiv-vdd~s~d~~~~~l~~~------~~~~~~~v~~--~~~~g~~~a~ 69 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK-P-LEIIV-VTDGDDEPYLSILSQT------VKYGGIFVIT--VPHPGKRRAL 69 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC-C-CEEEE-EeCCCChHHHHHHHhh------ccCCcEEEEe--cCCCChHHHH
Confidence 489999999999 99999999999998 4 56544 7788999987755221 2234555553 3456799999
Q ss_pred HHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccC
Q 040333 164 KEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHA 235 (513)
Q Consensus 164 n~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (513)
|.|++.+. ++|+|. |++|++++..+. ++++++|++.....+.+.+.+.......+..............+.
T Consensus 70 n~g~~~a~~d~v~~lD~D~~~~~~~l~~l~~~~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (235)
T cd06434 70 AEGIRHVTTDIVVLLDSDTVWPPNALPEMLKPFE-DPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEEIRAAMSYDGG 148 (235)
T ss_pred HHHHHHhCCCEEEEECCCceeChhHHHHHHHhcc-CCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999884 479999 999999999994 999999999988777655555555444333333333333444555
Q ss_pred cccccccchHhhHHHHHHhCCcCC----------CCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHh
Q 040333 236 FFGFNGTAGVWRIAAINEAGGWKD----------RTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRW 305 (513)
Q Consensus 236 ~~~~~G~~~~~Rr~~l~~~Gg~~~----------~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW 305 (513)
..+.+|+++++||+++++.+...+ ...+||.+++.++.++||++.|.|++.++++.|.+++++.+||.||
T Consensus 149 ~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw 228 (235)
T cd06434 149 VPCLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTETPENYKKFLKQQLRW 228 (235)
T ss_pred EEEccCcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEEcchhHHHHHHHhhhh
Confidence 666789999999999998754322 2468999999999999999999999999999999999999999999
Q ss_pred hhchh
Q 040333 306 SCGPA 310 (513)
Q Consensus 306 ~~G~~ 310 (513)
.+|..
T Consensus 229 ~~~~~ 233 (235)
T cd06434 229 SRSNW 233 (235)
T ss_pred hhccc
Confidence 99974
No 24
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.95 E-value=1e-25 Score=231.05 Aligned_cols=222 Identities=16% Similarity=0.185 Sum_probs=154.5
Q ss_pred CCCCCeEEEEEecCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecC---C
Q 040333 80 SSNFPVVLIQIPMFNEKEVYKISIGAACGLSWPS-DRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIREN---R 155 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~-~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~---~ 155 (513)
++..|+|||+||+|||++.+++||+|+++|+||+ .|++ +|+|+|+|+|.+ ++++..++++ .+.++++++.++ .
T Consensus 36 ~~~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eII-VVDd~StD~T~~-i~~~~~~~~~-~~~~i~vi~~~~~~~g 112 (384)
T TIGR03469 36 PEAWPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVI-LVDDHSTDGTAD-IARAAARAYG-RGDRLTVVSGQPLPPG 112 (384)
T ss_pred CCCCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEE-EEeCCCCCcHHH-HHHHHHHhcC-CCCcEEEecCCCCCCC
Confidence 4578999999999999999999999999999994 3433 366679999977 4444433321 123678776432 2
Q ss_pred CCCchhHHHHHhhhcc----------cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhh
Q 040333 156 TGYKAGALKEGLKRSY----------VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYH 222 (513)
Q Consensus 156 ~g~Ka~aln~gl~~a~----------v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 222 (513)
..||+.|+|.|++.+. ++|+|. ||+++++++.+ ++++.++|++....... +...+.....+...
T Consensus 113 ~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~-~~~~~~~vs~~~~~~~~--~~~~~~~~~~~~~~ 189 (384)
T TIGR03469 113 WSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARA-RAEGLDLVSLMVRLRCE--SFWEKLLIPAFVFF 189 (384)
T ss_pred CcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHH-HhCCCCEEEecccccCC--CHHHHHHHHHHHHH
Confidence 2479999999998864 259999 99999999999 45567788776654432 33332211111111
Q ss_pred hhH---HHHhhhhccCcccccccchHhhHHHHHHhCCcCC--CCccchHHHHHHHHhCCCeEEEeccceec-ccCCcCHH
Q 040333 223 FKV---EQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKD--RTTVEDMDLAVRASLKGWKFVYLGDLQVK-SELPSTFK 296 (513)
Q Consensus 223 ~~~---~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~-~~~p~t~~ 296 (513)
+.. ...............|+++++||++++++|||++ ....||.+++.|+.++|+++.+.+..... .+.-++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~~vGGf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~~~~~s~r~~~~~~ 269 (384)
T TIGR03469 190 FQKLYPFRWVNDPRRRTAAAAGGCILIRREALERIGGIAAIRGALIDDCTLAAAVKRSGGRIWLGLAARTRSLRPYDGLG 269 (384)
T ss_pred HHHhcchhhhcCCCccceeecceEEEEEHHHHHHcCCHHHHhhCcccHHHHHHHHHHcCCcEEEEecCceEEEEecCCHH
Confidence 100 0011111122223469999999999999999986 35689999999999999999988665543 34556888
Q ss_pred HHHHHHHHhhh
Q 040333 297 AFRFQQHRWSC 307 (513)
Q Consensus 297 ~~~~Qr~RW~~ 307 (513)
+.++|+.||..
T Consensus 270 ~~~~~~~r~~~ 280 (384)
T TIGR03469 270 EIWRMIARTAY 280 (384)
T ss_pred HHHHHHHHhHH
Confidence 99999998843
No 25
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.95 E-value=1.5e-26 Score=223.71 Aligned_cols=217 Identities=23% Similarity=0.268 Sum_probs=166.5
Q ss_pred CCCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEE-EcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 80 SSNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQV-LDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V-~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
.+..|++||+||+|||++.++++|+|+.+|+||+.+.+|+| +|+|+|+|.+. .++ +..+ +++++..+ ++.|
T Consensus 25 ~~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~-~~~----~~~~--~v~~i~~~-~~~g 96 (251)
T cd06439 25 PAYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEI-ARE----YADK--GVKLLRFP-ERRG 96 (251)
T ss_pred CCCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHH-HHH----HhhC--cEEEEEcC-CCCC
Confidence 46678999999999999999999999999999986455544 55688888764 443 2222 57777544 5567
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhh
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVG 230 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (513)
|++|+|.|++.+. ++|+|. |++++++++.+ ++++++++++.....+.+. ........... ........
T Consensus 97 ~~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~ 172 (251)
T cd06439 97 KAAALNRALALATGEIVVFTDANALLDPDALRLLVRHF-ADPSVGAVSGELVIVDGGG--SGSGEGLYWKY-ENWLKRAE 172 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHHHHh-cCCCccEEEeEEEecCCcc--cchhHHHHHHH-HHHHHHHH
Confidence 9999999999984 469999 99999999999 6889999999988766542 11111111011 11111112
Q ss_pred hhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchh
Q 040333 231 SATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPA 310 (513)
Q Consensus 231 ~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~ 310 (513)
...+.....+|+++++||++++ ++++....||.+++.++.++|+++.+.|++.+++..|.+++++.+|+.||++|++
T Consensus 173 ~~~~~~~~~~g~~~~~rr~~~~---~~~~~~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~g~~ 249 (251)
T cd06439 173 SRLGSTVGANGAIYAIRRELFR---PLPADTINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDGSEEFRRRVRIAAGNL 249 (251)
T ss_pred HhcCCeeeecchHHHhHHHHhc---CCCcccchhHHHHHHHHHHcCCeEEeccccEEEEeCcccHHHHHHHHHHHHhccc
Confidence 2233445567888999999998 6777778999999999999999999999999999999999999999999999987
Q ss_pred H
Q 040333 311 N 311 (513)
Q Consensus 311 ~ 311 (513)
|
T Consensus 250 ~ 250 (251)
T cd06439 250 Q 250 (251)
T ss_pred c
Confidence 6
No 26
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.95 E-value=2.1e-26 Score=219.00 Aligned_cols=214 Identities=20% Similarity=0.302 Sum_probs=159.5
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecC-CCCCchhHHHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIREN-RTGYKAGALKE 165 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~-~~g~Ka~aln~ 165 (513)
|+||+|||++.+++||+|+++|+||++.++|+ |+|+|+|+|.+.+ + ... ...+.+++++..+. .+.||+.++|.
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~-~-~~~--~~~~~~v~~~~~~~~~~~g~~~a~n~ 76 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQIL-E-FAA--AKPNFQLKILNNSRVSISGKKNALTT 76 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHH-H-HHH--hCCCcceEEeeccCcccchhHHHHHH
Confidence 68999999999999999999999998544554 4555888887743 3 111 23356777775542 35579999999
Q ss_pred Hhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcc
Q 040333 166 GLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFF 237 (513)
Q Consensus 166 gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (513)
|++.+. ++|+|. ||+|++++..+ .+++.+++++..... ...++....+..+......... .....+...
T Consensus 77 g~~~~~~d~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 153 (229)
T cd04192 77 AIKAAKGDWIVTTDADCVVPSNWLLTFVAFI-QKEQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLIA-GSFGLGKPF 153 (229)
T ss_pred HHHHhcCCEEEEECCCcccCHHHHHHHHHHh-hcCCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHHh-hHHHhcCcc
Confidence 999874 468888 99999999988 556777888877655 3345666555443332222111 122223333
Q ss_pred cccccchHhhHHHHHHhCCcCCC--CccchHHHHHHHHhCCC-eEEEe--ccceecccCCcCHHHHHHHHHHhhhc
Q 040333 238 GFNGTAGVWRIAAINEAGGWKDR--TTVEDMDLAVRASLKGW-KFVYL--GDLQVKSELPSTFKAFRFQQHRWSCG 308 (513)
Q Consensus 238 ~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED~~l~~rl~~~G~-ki~~~--~~~~~~~~~p~t~~~~~~Qr~RW~~G 308 (513)
..+|+++++||++++++|||++. ..+||.+++.++.++|+ ++.+. |++.++++.|.+++++.+||.||++|
T Consensus 154 ~~~g~~~~~rr~~~~~~ggf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~Rw~~g 229 (229)
T cd04192 154 MCNGANMAYRKEAFFEVGGFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKELLNQRKRWASK 229 (229)
T ss_pred ccccceEEEEHHHHHHhcCCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHHHHHHHHhhcC
Confidence 45789999999999999999865 34899999999999999 88887 56778899999999999999999987
No 27
>PLN02248 cellulose synthase-like protein
Probab=99.94 E-value=5.7e-24 Score=229.21 Aligned_cols=314 Identities=20% Similarity=0.277 Sum_probs=184.5
Q ss_pred EEEEEecCCCC----CchhHHHHHhhhcc---------cccCCh----HHHHHHHHHHhhcC---CCeEEEeeeEEEecC
Q 040333 147 IRYQIRENRTG----YKAGALKEGLKRSY---------VKHCEY----PDYLRRAIPYLVQN---SDIALVQARWRFVNA 206 (513)
Q Consensus 147 i~~i~~~~~~g----~Ka~aln~gl~~a~---------v~DaD~----pd~L~~lv~~~~~~---~~v~~V~~~~~~~n~ 206 (513)
+.|+.|+++++ .||||+|..++.+- .+|||. ++.+++.+.+|. | ++++.||.++++.|.
T Consensus 587 LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~l-D~~g~~vAfVQFPQrF~~I 665 (1135)
T PLN02248 587 LVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMM-DRGGDRICYVQFPQRFEGI 665 (1135)
T ss_pred eEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchhee-cCCCCceEEEcCCcccCCC
Confidence 45666666655 59999998887652 369999 789999999994 5 689999999998876
Q ss_pred CCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHh--------------------------------
Q 040333 207 NECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEA-------------------------------- 254 (513)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~-------------------------------- 254 (513)
+.+-.- ......+|...+.+.+..++.+ +.|+++++||+++...
T Consensus 666 ~k~D~Y---gn~~~Vffdi~~~GlDGlqGP~-YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1135)
T PLN02248 666 DPSDRY---ANHNTVFFDVNMRALDGLQGPV-YVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEE 741 (1135)
T ss_pred CCCCcc---CCcceeeeeeeeccccccCCcc-ccccCceeeehhhcCcCCcccccccccccccccccccccccccccccc
Confidence 442100 0011223333344444444432 4577777777665421
Q ss_pred --------------------------------------------------------------------------------
Q 040333 255 -------------------------------------------------------------------------------- 254 (513)
Q Consensus 255 -------------------------------------------------------------------------------- 254 (513)
T Consensus 742 ~~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~ 821 (1135)
T PLN02248 742 QPDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDK 821 (1135)
T ss_pred cccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccC
Confidence
Q ss_pred ------CCcCCCCccchHHHHHHHHhCCCeEEEe--ccceecccCCcCHHHHHHHHHHhhhchhHHHHHhhHhHhhcCCC
Q 040333 255 ------GGWKDRTTVEDMDLAVRASLKGWKFVYL--GDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRNKKV 326 (513)
Q Consensus 255 ------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~--~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~ 326 (513)
-||..++++||+..+++++.+|||.+|+ +.....+..|.++.+++.||.||+.|.+|++......++..+++
T Consensus 822 T~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~~~L 901 (1135)
T PLN02248 822 TEWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRRL 901 (1135)
T ss_pred CchhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccCCCC
Confidence 0233344799999999999999999998 34455689999999999999999999999987543445556789
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhcC-Cchhh---HHHHHHH-HHHHH-HHHHhccc-------hhH
Q 040333 327 KFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTILVP-EVQVP---IWGAVYI-PSIIT-ILNSVGTP-------RSI 393 (513)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~~l~~-~~~~~---~~~~~~l-~~~~~-~~~~~~~~-------~~~ 393 (513)
++.+++.++...+.. +..+. .+.|+ ++|++.++. ...++ .+.+.++ +.+++ ....+... +.+
T Consensus 902 sl~QRL~Yl~~~lyp---f~Slp-~liY~-llP~l~LLtGi~~~p~~~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~W 976 (1135)
T PLN02248 902 KFLQRIAYLNVGIYP---FTSIF-LIVYC-FLPALSLFSGQFIVQTLNVTFLVYLLIITITLCLLAVLEIKWSGITLEEW 976 (1135)
T ss_pred CHHHHHHHHHHHHHH---HHHHH-HHHHH-HHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhhccccHHHH
Confidence 999999976432221 11111 22233 455555442 21111 1222222 22221 11111100 111
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCceeeccccCcccccchhhhhcccCCCCCCCCcccccchhHHHHHH
Q 040333 394 H-LLFYWILFENVMSLHRTKATFIGLLEA--GRANEWVVTEKLGDALKNKAADAKNKTNTKAPKKPKIKFAERMHTLELG 470 (513)
Q Consensus 394 ~-~~~~~~~~~~~~s~~~~~a~~~gl~~~--g~~~~w~~T~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 470 (513)
+ --.+|++... + ....|++.+++.. +++..|.+|+|..+.+.++ . +. ..+.-.++.+.++.+.
T Consensus 977 WrnQq~W~I~~t--S-A~L~A~l~aiLKvLggs~~~F~VTsK~~~~d~~~--------~-~a--~ly~f~wS~L~iP~tt 1042 (1135)
T PLN02248 977 WRNEQFWLIGGT--S-AHLAAVLQGLLKVIAGIEISFTLTSKSAGDDEDD--------E-FA--DLYIVKWTSLMIPPIT 1042 (1135)
T ss_pred hhhhheeeehhh--H-HHHHHHHHHHHHHhcCccccceeCCccccccccc--------c-cc--hheecCcchHHHHHHH
Confidence 1 1123332111 1 1233556666543 7888999999977543322 0 00 0111113345677777
Q ss_pred HHHHHHHHHHHHHH
Q 040333 471 FGVFLFFCGCYDFV 484 (513)
Q Consensus 471 ~~~~~~~~~~~~~~ 484 (513)
+.+..++++++++.
T Consensus 1043 l~llNLvAivvGv~ 1056 (1135)
T PLN02248 1043 IMMVNLIAIAVGVS 1056 (1135)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777776666654
No 28
>PLN02195 cellulose synthase A
Probab=99.94 E-value=9.5e-24 Score=225.87 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=178.6
Q ss_pred CCCCCeEEEEEecCCCh----HHHHHHHHHHHcCCCCCCceEEEEEcCC-CcHHHHHHHHHH---------H--------
Q 040333 80 SSNFPVVLIQIPMFNEK----EVYKISIGAACGLSWPSDRLVIQVLDDS-TDPAIKQMVEQE---------C-------- 137 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~----~~l~~~l~sl~~q~yp~~~~~I~V~Dds-tD~t~~~l~~~~---------~-------- 137 (513)
++++|.|.|.|++-+.. -...+|+-|+++.|||.+++-++|.||+ +.-|.+.+.|+. |
T Consensus 248 ~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepR 327 (977)
T PLN02195 248 PSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFARKWVPFCKKYSIEPR 327 (977)
T ss_pred cccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcC
Confidence 35699999999887644 4888999999999999999999999884 333443333310 0
Q ss_pred --------------------------------H-----------H---Hh-----------------------------h
Q 040333 138 --------------------------------Q-----------R---WA-----------------------------A 142 (513)
Q Consensus 138 --------------------------------~-----------~---~~-----------------------------~ 142 (513)
+ + .+ .
T Consensus 328 aPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~ 407 (977)
T PLN02195 328 APEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGE 407 (977)
T ss_pred CHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccC
Confidence 0 0 00 0
Q ss_pred ---------cCCcEEEEEecCCCC----CchhHHHHHhhhcc---------cccCCh----HHHHHHHHHHhhcCC----
Q 040333 143 ---------KGINIRYQIRENRTG----YKAGALKEGLKRSY---------VKHCEY----PDYLRRAIPYLVQNS---- 192 (513)
Q Consensus 143 ---------~~~~i~~i~~~~~~g----~Ka~aln~gl~~a~---------v~DaD~----pd~L~~lv~~~~~~~---- 192 (513)
.-+++.|+.|++++| .||||+|.+++.+- .+|||. ++++++.+.+| .||
T Consensus 408 ~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~-~D~~~g~ 486 (977)
T PLN02195 408 TGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFL-MDPVVGR 486 (977)
T ss_pred CCCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhc-cCcccCC
Confidence 113466777877766 59999999997652 369997 68999999998 677
Q ss_pred CeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhC-----------------
Q 040333 193 DIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAG----------------- 255 (513)
Q Consensus 193 ~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G----------------- 255 (513)
+++.||.++.+.|.+.+-. .......++...+.+....++.+ +.|+++++||+++...+
T Consensus 487 ~va~VQ~PQ~F~~i~~~D~---y~~~~~~ffd~~~~g~dglqGP~-YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~ 562 (977)
T PLN02195 487 DVCYVQFPQRFDGIDRSDR---YANRNVVFFDVNMKGLDGIQGPV-YVGTGCVFNRQALYGYGPPSLPRLPKSSSSSSSC 562 (977)
T ss_pred eeEEEcCCcccCCCCCCCC---CCcccceeeeeeeccccccCCcc-ccccCceeeehhhhccCccccccccccccccccc
Confidence 6789999999888654210 00012223444444444444433 46777777777765321
Q ss_pred --------------------------------------------------------------------------------
Q 040333 256 -------------------------------------------------------------------------------- 255 (513)
Q Consensus 256 -------------------------------------------------------------------------------- 255 (513)
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ 642 (977)
T PLN02195 563 CCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGGVPESANPST 642 (977)
T ss_pred cccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcCCCCCCCcHH
Confidence
Q ss_pred -----------------------CcCCCCccchHHHHHHHHhCCCeEEEeccc--eecccCCcCHHHHHHHHHHhhhchh
Q 040333 256 -----------------------GWKDRTTVEDMDLAVRASLKGWKFVYLGDL--QVKSELPSTFKAFRFQQHRWSCGPA 310 (513)
Q Consensus 256 -----------------------g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~G~~ 310 (513)
||..++++||+..+++++.+|||.+|++.. ...+..|.|+.+.+.||.||+.|.+
T Consensus 643 ~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L~Qr~RWA~G~l 722 (977)
T PLN02195 643 LIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSV 722 (977)
T ss_pred HHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHHHHHHHHHhchh
Confidence 222334799999999999999999998643 4578999999999999999999999
Q ss_pred HHHHHhhHhHh---hcCCCChhHHHHHHHH
Q 040333 311 NLFRKMVMEII---RNKKVKFWKKVYVIYS 337 (513)
Q Consensus 311 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 337 (513)
|++......++ ..+++++.+|+.++..
T Consensus 723 qI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~ 752 (977)
T PLN02195 723 EIFLSRHCPLWYGYGGGRLKWLQRLAYINT 752 (977)
T ss_pred hhhhccCCccccccCCCCCCHHHHHHHHHH
Confidence 99874322333 2368999999987644
No 29
>PLN02189 cellulose synthase
Probab=99.93 E-value=2.2e-23 Score=224.29 Aligned_cols=252 Identities=20% Similarity=0.305 Sum_probs=179.6
Q ss_pred CCCCeEEEEEecCCCh----HHHHHHHHHHHcCCCCCCceEEEEEcCC-CcHHHHHHHHHH---------H---------
Q 040333 81 SNFPVVLIQIPMFNEK----EVYKISIGAACGLSWPSDRLVIQVLDDS-TDPAIKQMVEQE---------C--------- 137 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~----~~l~~~l~sl~~q~yp~~~~~I~V~Dds-tD~t~~~l~~~~---------~--------- 137 (513)
+.+|.|.|.|++-+.. -...+|+-|+++.|||.+++-++|.||+ +.-|.+.+.|+. |
T Consensus 328 ~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 407 (1040)
T PLN02189 328 NMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEFARKWVPFCKKFSIEPRA 407 (1040)
T ss_pred ccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 4599999999887644 4888999999999999999999999884 333444443310 0
Q ss_pred -------------------------------HH--------------Hh----------------------------h--
Q 040333 138 -------------------------------QR--------------WA----------------------------A-- 142 (513)
Q Consensus 138 -------------------------------~~--------------~~----------------------------~-- 142 (513)
++ .+ +
T Consensus 408 Pe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~ 487 (1040)
T PLN02189 408 PEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 487 (1040)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCC
Confidence 00 00 0
Q ss_pred --------cCCcEEEEEecCCCC----CchhHHHHHhhhcc---------cccCCh----HHHHHHHHHHhhcCC----C
Q 040333 143 --------KGINIRYQIRENRTG----YKAGALKEGLKRSY---------VKHCEY----PDYLRRAIPYLVQNS----D 193 (513)
Q Consensus 143 --------~~~~i~~i~~~~~~g----~Ka~aln~gl~~a~---------v~DaD~----pd~L~~lv~~~~~~~----~ 193 (513)
.-+++.|+.|+++++ .||||+|..++.+- .+|||. |+.+++.+.+| -|| +
T Consensus 488 ~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCff-lDp~~g~~ 566 (1040)
T PLN02189 488 GGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFL-MDPQIGRK 566 (1040)
T ss_pred CCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhh-cCCccCce
Confidence 012388898888776 59999999997652 369999 79999999998 577 8
Q ss_pred eEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHh-------------------
Q 040333 194 IALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEA------------------- 254 (513)
Q Consensus 194 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~------------------- 254 (513)
++.||.++++.|.+.+-.- ......++...+.+.+..++.+ +.|+++++||+++...
T Consensus 567 vAfVQFPQrF~~i~k~D~Y---gn~~~vffdi~~~GlDGlqGP~-YvGTGC~fRR~ALyG~~p~~~~~~~~~~~~~~~~~ 642 (1040)
T PLN02189 567 VCYVQFPQRFDGIDTHDRY---ANRNTVFFDINMKGLDGIQGPV-YVGTGCVFRRQALYGYDPPKGPKRPKMVTCDCCPC 642 (1040)
T ss_pred eEEEeCccccCCCCCCCcc---CCccceeeeeeecccccCCCcc-ccccCceeeeeeeeccCcccccccccccccchhhh
Confidence 9999999998876542100 0011223344444444444433 4677777777665421
Q ss_pred --------------------------------------------------------------------------------
Q 040333 255 -------------------------------------------------------------------------------- 254 (513)
Q Consensus 255 -------------------------------------------------------------------------------- 254 (513)
T Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~ 722 (1040)
T PLN02189 643 FGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPPSSSPAALLKEAIHVISCGYED 722 (1040)
T ss_pred cccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCCCCCcHHHHHHHHHhhcccccc
Confidence
Q ss_pred ----C---CcCCCCccchHHHHHHHHhCCCeEEEec--cceecccCCcCHHHHHHHHHHhhhchhHHHHHhhHhHhh---
Q 040333 255 ----G---GWKDRTTVEDMDLAVRASLKGWKFVYLG--DLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIR--- 322 (513)
Q Consensus 255 ----G---g~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--- 322 (513)
| ||..++++||+..+++++.+|||.+|+. .+...+..|.|+.+.+.||.||+.|.+|++......++.
T Consensus 723 ~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lqI~~sr~nPl~~g~~ 802 (1040)
T PLN02189 723 KTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVEIFFSRHSPLLYGYK 802 (1040)
T ss_pred CCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHHHhhccCCccccccC
Confidence 0 3334457999999999999999999994 455678999999999999999999999998743233332
Q ss_pred cCCCChhHHHHHHHH
Q 040333 323 NKKVKFWKKVYVIYS 337 (513)
Q Consensus 323 ~~~~~~~~~~~~~~~ 337 (513)
.+++++.+++.++..
T Consensus 803 ~~~L~l~QRL~Yl~~ 817 (1040)
T PLN02189 803 GGNLKWLERFAYVNT 817 (1040)
T ss_pred CCCCCHHHHHHHHHH
Confidence 367899999987644
No 30
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.93 E-value=1.9e-24 Score=208.33 Aligned_cols=222 Identities=22% Similarity=0.250 Sum_probs=162.9
Q ss_pred eEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHH
Q 040333 85 VVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGAL 163 (513)
Q Consensus 85 ~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~al 163 (513)
++||+||+|||++.+.++|+|+.+|+||....+|+ |+|+|+|+|.+. .+. +.++.+.++++..+ ++++++|+
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~-~~~----~~~~~~~v~~i~~~--~~~~~~a~ 73 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREI-VQE----YAAKDPRIRLIDNP--KRIQSAGL 73 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHH-HHH----HHhcCCeEEEEeCC--CCCchHHH
Confidence 38999999999999999999999999974444444 555688888664 343 33445678887543 34588999
Q ss_pred HHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHH--hhhhc
Q 040333 164 KEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQE--VGSAT 233 (513)
Q Consensus 164 n~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 233 (513)
|.|++.+. ++|+|. |++|+++++.+ .+++.+++++.....+.+. ...... ......+..... .....
T Consensus 74 N~g~~~a~~d~v~~lD~D~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 150 (249)
T cd02525 74 NIGIRNSRGDIIIRVDAHAVYPKDYILELVEAL-KRTGADNVGGPMETIGESK-FQKAIA-VAQSSPLGSGGSAYRGGAV 150 (249)
T ss_pred HHHHHHhCCCEEEEECCCccCCHHHHHHHHHHH-hcCCCCEEecceecCCCCh-HHHHHH-HHhhchhccCCcccccccc
Confidence 99999985 468888 99999999988 6678888887765444321 111111 111111110000 00011
Q ss_pred cCcccccccchHhhHHHHHHhCCcCCCC-ccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchhHH
Q 040333 234 HAFFGFNGTAGVWRIAAINEAGGWKDRT-TVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANL 312 (513)
Q Consensus 234 ~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~ 312 (513)
.......|+++++||++++++|+|++.. .+||.+++.|+.++|+++.++|++.+.+..+.+++.+.+|+.||..|..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~s~~~~~~~~~r~~~~~~~~ 230 (249)
T cd02525 151 KIGYVDTVHHGAYRREVFEKVGGFDESLVRNEDAELNYRLRKAGYKIWLSPDIRVYYYPRSTLKKLARQYFRYGKWRART 230 (249)
T ss_pred ccccccccccceEEHHHHHHhCCCCcccCccchhHHHHHHHHcCcEEEEcCCeEEEEcCCCCHHHHHHHHHHHhhhhHHH
Confidence 1022356888999999999999998863 379999999999999999999999999999999999999999999999998
Q ss_pred HHHh
Q 040333 313 FRKM 316 (513)
Q Consensus 313 ~~~~ 316 (513)
.+++
T Consensus 231 ~~~~ 234 (249)
T cd02525 231 LRKH 234 (249)
T ss_pred HHhC
Confidence 8765
No 31
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=99.92 E-value=1.4e-22 Score=218.86 Aligned_cols=252 Identities=20% Similarity=0.292 Sum_probs=178.6
Q ss_pred CCCCeEEEEEecCCCh----HHHHHHHHHHHcCCCCCCceEEEEEcCC-CcHHHHHHHHHH---------HH--------
Q 040333 81 SNFPVVLIQIPMFNEK----EVYKISIGAACGLSWPSDRLVIQVLDDS-TDPAIKQMVEQE---------CQ-------- 138 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~----~~l~~~l~sl~~q~yp~~~~~I~V~Dds-tD~t~~~l~~~~---------~~-------- 138 (513)
+++|.|.|.|++-+.. -...+|+-|+++.|||.+++-++|.||+ +.-|.+.+.|+. |+
T Consensus 346 s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~~WvPFCkK~~IepRa 425 (1079)
T PLN02638 346 SQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRA 425 (1079)
T ss_pred ccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCC
Confidence 5699999999887654 4888999999999999999999999884 333444443310 00
Q ss_pred --------------------------------H--------------Hh-------------------------------
Q 040333 139 --------------------------------R--------------WA------------------------------- 141 (513)
Q Consensus 139 --------------------------------~--------------~~------------------------------- 141 (513)
+ .+
T Consensus 426 Pe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~ 505 (1079)
T PLN02638 426 PEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHS 505 (1079)
T ss_pred HHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCC
Confidence 0 00
Q ss_pred -----h--cCCcEEEEEecCCCC----CchhHHHHHhhhcc---------cccCCh----HHHHHHHHHHhhcCCC----
Q 040333 142 -----A--KGINIRYQIRENRTG----YKAGALKEGLKRSY---------VKHCEY----PDYLRRAIPYLVQNSD---- 193 (513)
Q Consensus 142 -----~--~~~~i~~i~~~~~~g----~Ka~aln~gl~~a~---------v~DaD~----pd~L~~lv~~~~~~~~---- 193 (513)
+ .-+++.|+.|+++++ .||||+|..++.+- .+|||. |+.+++.+.+| -||+
T Consensus 506 ~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~-lDp~~g~~ 584 (1079)
T PLN02638 506 GGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFL-MDPNLGKS 584 (1079)
T ss_pred CccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhh-cCcccCCe
Confidence 0 112358888888777 59999999997762 369998 89999999998 5765
Q ss_pred eEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhC------------------
Q 040333 194 IALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAG------------------ 255 (513)
Q Consensus 194 v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G------------------ 255 (513)
++.||.++++.|.+.+-. .......+|...+.+.+..++.+ +.|+++++||+++....
T Consensus 585 vafVQFPQrF~~i~k~D~---Ygn~~~vffdi~~~GlDGlqGP~-YvGTGC~fRR~ALYG~~p~~~~~~~~~~~~~~~~~ 660 (1079)
T PLN02638 585 VCYVQFPQRFDGIDRNDR---YANRNTVFFDINLRGLDGIQGPV-YVGTGCVFNRTALYGYEPPIKPKHKKPGFLSSLCG 660 (1079)
T ss_pred eEEecCCcccCCCCCCCc---ccccceeeeccccccccccCCcc-ccccCcceeehhhcCcCCccccccccccccccccc
Confidence 889999999887654210 00112223444444444444433 46777777777754220
Q ss_pred --------------------------------------------------------------------------------
Q 040333 256 -------------------------------------------------------------------------------- 255 (513)
Q Consensus 256 -------------------------------------------------------------------------------- 255 (513)
T Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~ 740 (1079)
T PLN02638 661 GSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQ 740 (1079)
T ss_pred ccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHHHHHhhcCCCC
Confidence
Q ss_pred -----------------------------CcCCCCccchHHHHHHHHhCCCeEEEe-ccc-eecccCCcCHHHHHHHHHH
Q 040333 256 -----------------------------GWKDRTTVEDMDLAVRASLKGWKFVYL-GDL-QVKSELPSTFKAFRFQQHR 304 (513)
Q Consensus 256 -----------------------------g~~~~~~~ED~~l~~rl~~~G~ki~~~-~~~-~~~~~~p~t~~~~~~Qr~R 304 (513)
||..++++||+..+++++.+|||.+|+ |+. ...+..|.|+.+++.||.|
T Consensus 741 ~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~l~d~L~Qr~R 820 (1079)
T PLN02638 741 SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLR 820 (1079)
T ss_pred CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCCCCHHHHHHHHHH
Confidence 122234799999999999999999999 543 4568999999999999999
Q ss_pred hhhchhHHHHHhhHhHhh--cCCCChhHHHHHHHH
Q 040333 305 WSCGPANLFRKMVMEIIR--NKKVKFWKKVYVIYS 337 (513)
Q Consensus 305 W~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 337 (513)
|+.|.+|++......++. ++++++.+++.++..
T Consensus 821 WA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~ 855 (1079)
T PLN02638 821 WALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNT 855 (1079)
T ss_pred HhhcchheeeccCCccccccCCCCCHHHHHHHHHH
Confidence 999999998632223442 468999999987643
No 32
>PLN02190 cellulose synthase-like protein
Probab=99.92 E-value=5.7e-23 Score=215.46 Aligned_cols=248 Identities=22% Similarity=0.342 Sum_probs=168.3
Q ss_pred CCCCeEEEEEecCC---Ch-HHHHHHHHHHHcCCCCCCceEEEEEcCC-CcHHHHHHHHHH---------H---------
Q 040333 81 SNFPVVLIQIPMFN---EK-EVYKISIGAACGLSWPSDRLVIQVLDDS-TDPAIKQMVEQE---------C--------- 137 (513)
Q Consensus 81 ~~~P~VsIiIP~yN---E~-~~l~~~l~sl~~q~yp~~~~~I~V~Dds-tD~t~~~l~~~~---------~--------- 137 (513)
+++|.|.|.|+++| |+ ..+.+|+-|+++.|||.+++-++|.||+ +.-|.+.+.|+. |
T Consensus 90 ~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFCrK~~IepRa 169 (756)
T PLN02190 90 HDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFCKKYNVRVRA 169 (756)
T ss_pred ccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccccccCCCcCC
Confidence 35899999999999 87 6889999999999999999999999885 333554444410 0
Q ss_pred ----------------------------HHH----hh-------------------------------------------
Q 040333 138 ----------------------------QRW----AA------------------------------------------- 142 (513)
Q Consensus 138 ----------------------------~~~----~~------------------------------------------- 142 (513)
+++ .+
T Consensus 170 Pe~YF~~~~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll~~~~~~~~~~ 249 (756)
T PLN02190 170 PFRYFLNPPVATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVWENKGGVGDEK 249 (756)
T ss_pred HHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEecCCCCccccc
Confidence 000 00
Q ss_pred cCCcEEEEEecCCCC----CchhHHHHHhhhcc-------c--ccCCh----HHHHHHHHHHhhcCC----CeEEEeeeE
Q 040333 143 KGINIRYQIRENRTG----YKAGALKEGLKRSY-------V--KHCEY----PDYLRRAIPYLVQNS----DIALVQARW 201 (513)
Q Consensus 143 ~~~~i~~i~~~~~~g----~Ka~aln~gl~~a~-------v--~DaD~----pd~L~~lv~~~~~~~----~v~~V~~~~ 201 (513)
+-+++.|+.|++|++ .||||+|..++.+- + +|||. |+.+++.+..|..++ +++.||-++
T Consensus 250 ~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~~~~~fVQfPQ 329 (756)
T PLN02190 250 EVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNSNHCAFVQFPQ 329 (756)
T ss_pred cCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCCCeeEEEeCch
Confidence 113456777777766 69999999887762 2 69999 999999999985332 589999999
Q ss_pred EEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHH-------------------------------
Q 040333 202 RFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAA------------------------------- 250 (513)
Q Consensus 202 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~------------------------------- 250 (513)
++.+.-.+-.+. .+.....+-+..++. .+.|+++++||++
T Consensus 330 ~F~D~y~n~~~v--------~f~~~~~GldGlqGP-~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (756)
T PLN02190 330 EFYDSNTNELTV--------LQSYLGRGIAGIQGP-IYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLAR 400 (756)
T ss_pred hhccccCccceE--------EEEEeeccccccCCc-ccccCCcceEeeeecCCCcccccccccccccccccccchhhhhh
Confidence 875432221110 011111111111111 1223333333322
Q ss_pred -----------------------------HHHh-----------------CCcCCCCccchHHHHHHHHhCCCeEEEecc
Q 040333 251 -----------------------------INEA-----------------GGWKDRTTVEDMDLAVRASLKGWKFVYLGD 284 (513)
Q Consensus 251 -----------------------------l~~~-----------------Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~ 284 (513)
++++ -||..++++||...+++++.+|||.+|+..
T Consensus 401 ~fg~s~~f~~s~~~~~~~~~~~~~~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~~p 480 (756)
T PLN02190 401 EFGNSKEMVKSVVDALQRKPNPQNSLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYISP 480 (756)
T ss_pred hcCCcHHHHHHHHHHhccCCCCccchHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEecCC
Confidence 2221 146666789999999999999999999853
Q ss_pred --ceecccCCcCHHHHHHHHHHhhhchhHHHHHhhHhHhh--cCCCChhHHHHHHHH
Q 040333 285 --LQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIR--NKKVKFWKKVYVIYS 337 (513)
Q Consensus 285 --~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 337 (513)
+...+..|.++.+.+.||+||+.|.+|++......++. .+++++.+|+.++..
T Consensus 481 ~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~ 537 (756)
T PLN02190 481 DPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYV 537 (756)
T ss_pred CchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHH
Confidence 33457899999999999999999999997754333433 478999999997654
No 33
>PLN02400 cellulose synthase
Probab=99.92 E-value=6.5e-23 Score=221.43 Aligned_cols=81 Identities=20% Similarity=0.337 Sum_probs=66.8
Q ss_pred cCCCCccchHHHHHHHHhCCCeEEEec--cceecccCCcCHHHHHHHHHHhhhchhHHHHHhhHhHhh--cCCCChhHHH
Q 040333 257 WKDRTTVEDMDLAVRASLKGWKFVYLG--DLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIR--NKKVKFWKKV 332 (513)
Q Consensus 257 ~~~~~~~ED~~l~~rl~~~G~ki~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--~~~~~~~~~~ 332 (513)
|--++++||+..+++++.+|||.+|+. .+...+..|.++.+++.||.||+.|.+|++......++. .+++++.+|+
T Consensus 776 wiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL 855 (1085)
T PLN02400 776 WIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERL 855 (1085)
T ss_pred eeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHH
Confidence 334567999999999999999999994 556789999999999999999999999998743233443 4789999999
Q ss_pred HHHHH
Q 040333 333 YVIYS 337 (513)
Q Consensus 333 ~~~~~ 337 (513)
.++..
T Consensus 856 ~Yl~~ 860 (1085)
T PLN02400 856 AYINT 860 (1085)
T ss_pred HHHHH
Confidence 97654
No 34
>PLN02436 cellulose synthase A
Probab=99.92 E-value=2.2e-22 Score=216.48 Aligned_cols=81 Identities=22% Similarity=0.370 Sum_probs=65.4
Q ss_pred cCCCCccchHHHHHHHHhCCCeEEEe-ccce-ecccCCcCHHHHHHHHHHhhhchhHHHHHhhHhHh--hcCCCChhHHH
Q 040333 257 WKDRTTVEDMDLAVRASLKGWKFVYL-GDLQ-VKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEII--RNKKVKFWKKV 332 (513)
Q Consensus 257 ~~~~~~~ED~~l~~rl~~~G~ki~~~-~~~~-~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~--~~~~~~~~~~~ 332 (513)
|.-++++||+..+++++.+|||.+|+ |+.. ..+..|.++.+++.||.||+.|.+|++......++ ..+++++.+|+
T Consensus 787 wiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL 866 (1094)
T PLN02436 787 WIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERF 866 (1094)
T ss_pred eeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHH
Confidence 44456799999999999999999998 5553 46899999999999999999999999865323333 24679999999
Q ss_pred HHHHH
Q 040333 333 YVIYS 337 (513)
Q Consensus 333 ~~~~~ 337 (513)
.++..
T Consensus 867 ~Yl~~ 871 (1094)
T PLN02436 867 SYINS 871 (1094)
T ss_pred HHHHH
Confidence 87654
No 35
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=99.91 E-value=3.5e-22 Score=215.15 Aligned_cols=81 Identities=22% Similarity=0.391 Sum_probs=67.1
Q ss_pred cCCCCccchHHHHHHHHhCCCeEEEec-c-ceecccCCcCHHHHHHHHHHhhhchhHHHHHhhHhHhh--cCCCChhHHH
Q 040333 257 WKDRTTVEDMDLAVRASLKGWKFVYLG-D-LQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIR--NKKVKFWKKV 332 (513)
Q Consensus 257 ~~~~~~~ED~~l~~rl~~~G~ki~~~~-~-~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~--~~~~~~~~~~ 332 (513)
|..++++||+..+++++.+|||.+|+. + +...+..|.++.+++.||.||+.|.+|+++.....++. .+++++.+++
T Consensus 735 w~YGSvTEDv~TG~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL 814 (1044)
T PLN02915 735 WIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERL 814 (1044)
T ss_pred ccccccccHHHHHHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHH
Confidence 555678999999999999999999994 4 34468999999999999999999999999854333442 4789999999
Q ss_pred HHHHH
Q 040333 333 YVIYS 337 (513)
Q Consensus 333 ~~~~~ 337 (513)
.++..
T Consensus 815 ~Yl~~ 819 (1044)
T PLN02915 815 AYINT 819 (1044)
T ss_pred HHHHH
Confidence 97654
No 36
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.89 E-value=1.6e-22 Score=186.05 Aligned_cols=169 Identities=20% Similarity=0.241 Sum_probs=130.6
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~g 166 (513)
|+||+|||++.+.++|+|+++|+||..+++|+ |+|+|+|+|.+.+.+ + +..+.. ...++++||++|+|.|
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~-----~---~~~~~~-~~~~~~~gk~~aln~g 71 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA-----A---GATVLE-RHDPERRGKGYALDFG 71 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH-----c---CCeEEE-eCCCCCCCHHHHHHHH
Confidence 68999999999999999999999986544444 557799999874332 1 222322 2334567899999999
Q ss_pred hhhc------c----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhc
Q 040333 167 LKRS------Y----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSAT 233 (513)
Q Consensus 167 l~~a------~----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (513)
++.+ . ++|+|. |+++.+++..+.+ +.++|++.....+.+.++..+.+..++.......+......
T Consensus 72 ~~~a~~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~~--~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (183)
T cd06438 72 FRHLLNLADDPDAVVVFDADNLVDPNALEELNARFAA--GARVVQAYYNSKNPDDSWITRLYAFAFLVFNRLRPLGRSNL 149 (183)
T ss_pred HHHHHhcCCCCCEEEEEcCCCCCChhHHHHHHHHHhh--CCCeeEEEEeeeCCccCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9865 1 479999 9999999999943 45688888887776667888887766655555555556666
Q ss_pred cCcccccccchHhhHHHHHHhCCcCCCCccchHHH
Q 040333 234 HAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDL 268 (513)
Q Consensus 234 ~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l 268 (513)
+....+.|+++++||+++++ |||++.+++||+++
T Consensus 150 ~~~~~~~G~~~~~rr~~l~~-~g~~~~~l~ED~~~ 183 (183)
T cd06438 150 GLSCQLGGTGMCFPWAVLRQ-APWAAHSLTEDLEF 183 (183)
T ss_pred CCCeeecCchhhhHHHHHHh-CCCCCCCcccccCC
Confidence 77777889999999999999 99999999999874
No 37
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.89 E-value=3e-22 Score=185.46 Aligned_cols=168 Identities=22% Similarity=0.308 Sum_probs=135.3
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEec--CCCCCchhHHHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRE--NRTGYKAGALKE 165 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~--~~~g~Ka~aln~ 165 (513)
|+||+|||++.++++|+|+++|+ |+.+++| |+|+|+|+|.+.+ + . ...+.+++++.+. +.++||++|+|.
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~~eIiv-vdd~S~D~t~~~~-~-~----~~~~~~v~~i~~~~~~~~~Gk~~aln~ 72 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PNFLVLV-IDDASDDDTAGIV-R-L----AITDSRVHLLRRHLPNARTGKGDALNA 72 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CCeEEEE-EECCCCcCHHHHH-h-h----eecCCcEEEEeccCCcCCCCHHHHHHH
Confidence 68999999999999999999998 7655443 6677999998744 3 1 1224578877653 345689999999
Q ss_pred Hhhhc--------------c--cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHH
Q 040333 166 GLKRS--------------Y--VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVE 226 (513)
Q Consensus 166 gl~~a--------------~--v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 226 (513)
|++.+ . ++|+|. |++|+++...+ ++|++++++++....|.+.++.+++|.+++...+...
T Consensus 73 g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 151 (191)
T cd06436 73 AYDQIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF-SDPRVAGTQSRVRMYNRHKNLLTILQDLEFFIIIAAT 151 (191)
T ss_pred HHHHHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh-cCCceEEEeeeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 99874 2 469998 99999988877 7899999999999999888899999999888777777
Q ss_pred HHhhhhccCcccccccchHhhHHHHHHhCCcCCC--Cccch
Q 040333 227 QEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDR--TTVED 265 (513)
Q Consensus 227 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~--~~~ED 265 (513)
+..+...+. ..+.|++.++||++++++|||++. +++||
T Consensus 152 ~~~~~~~~~-~~~~G~~~~~r~~~l~~vgg~~~~~~~~~ED 191 (191)
T cd06436 152 QSLRALTGT-VGLGGNGQFMRLSALDGLIGEEPWSDSLLED 191 (191)
T ss_pred HHHHHhcCc-EEECCeeEEEeHHHHHHhhcCCCCchhhcCC
Confidence 776666554 457899999999999999776654 77888
No 38
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.88 E-value=2.7e-22 Score=187.12 Aligned_cols=189 Identities=19% Similarity=0.290 Sum_probs=139.0
Q ss_pred CeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhH
Q 040333 84 PVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGA 162 (513)
Q Consensus 84 P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~a 162 (513)
|++||+||+|||+ +.+++||+|+.+|+|++.+++| |+|+|+|++.+.+.+.+ ..++.+++++.. +.+.|++.|
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiiv-vd~gs~d~~~~~~~~~~----~~~~~~~~~~~~-~~~~g~~~a 74 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWELCI-ADDASTDPEVKRVLKKY----AAQDPRIKVVFR-EENGGISAA 74 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEE-EeCCCCChHHHHHHHHH----HhcCCCEEEEEc-ccCCCHHHH
Confidence 6799999999999 9999999999999999766544 77778898877666543 233567777644 456679999
Q ss_pred HHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhcc
Q 040333 163 LKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATH 234 (513)
Q Consensus 163 ln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (513)
+|.|++.+. ++|+|. |++++++++.+.+++++++|.+.......+....... ....+.....
T Consensus 75 ~n~g~~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~------ 144 (202)
T cd04184 75 TNSALELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKIDEGGKRSEPF----FKPDWSPDLL------ 144 (202)
T ss_pred HHHHHHhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhccCCCCEeccc----cCCCCCHHHh------
Confidence 999999884 468888 9999999999867889998877654332221111100 0000110000
Q ss_pred CcccccccchHhhHHHHHHhCCcCCCC-ccchHHHHHHHHhCCCeEEEeccceec
Q 040333 235 AFFGFNGTAGVWRIAAINEAGGWKDRT-TVEDMDLAVRASLKGWKFVYLGDLQVK 288 (513)
Q Consensus 235 ~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~ 288 (513)
......|+++++||++++++|||++.. .+||+|++.|+.++|+++.++|++...
T Consensus 145 ~~~~~~~~~~~~~r~~~~~iggf~~~~~~~eD~~l~~rl~~~g~~~~~~~~~~~~ 199 (202)
T cd04184 145 LSQNYIGHLLVYRRSLVRQVGGFREGFEGAQDYDLVLRVSEHTDRIAHIPRVLYH 199 (202)
T ss_pred hhcCCccceEeEEHHHHHHhCCCCcCcccchhHHHHHHHHhccceEEEccHhhhh
Confidence 011234677899999999999998864 489999999999999999999997654
No 39
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.87 E-value=2e-21 Score=181.19 Aligned_cols=189 Identities=20% Similarity=0.296 Sum_probs=137.4
Q ss_pred EEEEecCCCh--HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHH
Q 040333 87 LIQIPMFNEK--EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALK 164 (513)
Q Consensus 87 sIiIP~yNE~--~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln 164 (513)
||+||+||++ +.+++||+|+++|+|++.+++| |+|+|+|++...+++.+.+ +. +++++..+ .+.|+++|+|
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~eiii-vdd~ss~d~t~~~~~~~~~----~~-~i~~i~~~-~n~G~~~a~N 73 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEVVL-VKDGPVTQSLNEVLEEFKR----KL-PLKVVPLE-KNRGLGKALN 73 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEEEE-EECCCCchhHHHHHHHHHh----cC-CeEEEEcC-ccccHHHHHH
Confidence 6999999997 5999999999999999766544 7777745444445554433 23 37777554 4567999999
Q ss_pred HHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCc
Q 040333 165 EGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAF 236 (513)
Q Consensus 165 ~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (513)
.|++.+. ++|+|. |+++++++..+.++|+++++++.....+.+........ .. ....... ......
T Consensus 74 ~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~----~~~~~~ 147 (201)
T cd04195 74 EGLKHCTYDWVARMDTDDISLPDRFEKQLDFIEKNPEIDIVGGGVLEFDSDGNDIGKRR-LP-TSHDDIL----KFARRR 147 (201)
T ss_pred HHHHhcCCCEEEEeCCccccCcHHHHHHHHHHHhCCCeEEEcccEEEECCCCCeecccc-CC-CCHHHHH----HHhccC
Confidence 9999884 468888 99999999999778999999998876554332111000 00 0000000 000111
Q ss_pred ccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceec
Q 040333 237 FGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVK 288 (513)
Q Consensus 237 ~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 288 (513)
..+.|+++++||++++++|||++....||++++.|+..+|+++.++|++.++
T Consensus 148 ~~~~~~~~~~rr~~~~~~g~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~~~~ 199 (201)
T cd04195 148 SPFNHPTVMFRKSKVLAVGGYQDLPLVEDYALWARMLANGARFANLPEILVK 199 (201)
T ss_pred CCCCChHHhhhHHHHHHcCCcCCCCCchHHHHHHHHHHcCCceecccHHHhh
Confidence 2345778999999999999999887899999999999999999999988764
No 40
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.87 E-value=1.3e-21 Score=194.44 Aligned_cols=200 Identities=15% Similarity=0.121 Sum_probs=137.3
Q ss_pred EEEEecCCCh-HHHHHHHHHHHcCCCCCC--ceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHH
Q 040333 87 LIQIPMFNEK-EVYKISIGAACGLSWPSD--RLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGAL 163 (513)
Q Consensus 87 sIiIP~yNE~-~~l~~~l~sl~~q~yp~~--~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~al 163 (513)
|||||+|||+ +.+++||+|+.+|+++.. |++| |+|+|+|+|.+.+.+... ....+++++++.+ ++.|.+.|+
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIv-VDd~S~d~t~~~~~~~~~---~~~~~~v~vi~~~-~n~G~~~a~ 75 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIIL-VDDFSDKPELKLLLEEYY---KKYLPKVKVLRLK-KREGLIRAR 75 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEE-EECCCCchHHHHHHHHHH---hhcCCcEEEEEcC-CCCCHHHHH
Confidence 6999999999 999999999999998864 4333 667799999886544221 1335678888554 566799999
Q ss_pred HHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHH----H---HHhhhhhhhh---H
Q 040333 164 KEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTR----M---QEMSLDYHFK---V 225 (513)
Q Consensus 164 n~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~----~---~~~~~~~~~~---~ 225 (513)
|.|++.|. ++|+|. |+||+++++.+.++|. +++++.....+.+...... . ....+...+. .
T Consensus 76 N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~~-~~v~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (299)
T cd02510 76 IAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAENRK-TVVCPIIDVIDADTFEYRGSSGDARGGFDWSLHFKWLPLPE 154 (299)
T ss_pred HHHHHHccCCEEEEEeCCcccCccHHHHHHHHHHhCCC-eEEEeeeccccCCCeeEecCCCceeEEecccceeccccCCH
Confidence 99999985 479998 9999999999966655 4555543322221100000 0 0000000000 0
Q ss_pred H---HHhhhhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccceecccCC
Q 040333 226 E---QEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQVKSELP 292 (513)
Q Consensus 226 ~---~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p 292 (513)
. ............++|+++++||++++++|||++... .||.|+++|+.++|+++.++|++.+.+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~ 227 (299)
T cd02510 155 EERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFR 227 (299)
T ss_pred HHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEecc
Confidence 0 000011122334579999999999999999998754 599999999999999999999999886443
No 41
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.83 E-value=1.1e-19 Score=168.58 Aligned_cols=136 Identities=31% Similarity=0.496 Sum_probs=120.5
Q ss_pred cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhH
Q 040333 172 VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRI 248 (513)
Q Consensus 172 v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr 248 (513)
++|+|. ||+++++++.+. +|+++++|++....+ .+++.++.|..++.......+...+..+....+.|+++++|+
T Consensus 4 ~~DaDt~~~~d~l~~~~~~~~-~~~~~~vq~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~r~ 81 (193)
T PF13632_consen 4 FLDADTRLPPDFLERLVAALE-DPKVDAVQGPIIFRN-RGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGSGMLFRR 81 (193)
T ss_pred EEcCCCCCChHHHHHHHHHHh-CCCceEEEccEEecC-CCChhheeehhhhhhhhhhhHHHHHhcCCCccccCcceeeeH
Confidence 469999 999999999995 899999999999865 467899998887755544445555666777778899999999
Q ss_pred HHHHHhCCcC-CCCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhch
Q 040333 249 AAINEAGGWK-DRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGP 309 (513)
Q Consensus 249 ~~l~~~Gg~~-~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~ 309 (513)
++++++|||+ ...++||.|++.|+.++||++.++|++.++++.|+|+.++.+||+||.+|.
T Consensus 82 ~~l~~vg~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 82 EALREVGGFDDPFSIGEDMDLGFRLRRAGYRIVYVPDAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred HHHHHhCcccccccccchHHHHHHHHHCCCEEEEecccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 9999999999 777899999999999999999999999999999999999999999999997
No 42
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=99.82 E-value=1e-19 Score=190.74 Aligned_cols=77 Identities=19% Similarity=0.367 Sum_probs=63.2
Q ss_pred CCccchHHHHHHHHhCCCeEEEecc--ceecccCCcCHHHHHHHHHHhhhchhHHHHHhhHhHhhc--CCCChhHHHHHH
Q 040333 260 RTTVEDMDLAVRASLKGWKFVYLGD--LQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIIRN--KKVKFWKKVYVI 335 (513)
Q Consensus 260 ~~~~ED~~l~~rl~~~G~ki~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 335 (513)
++++||+..+++++.+|||.+|+.. +...+-.|.++.+.+.|+.||+.|.+|++......++.. +++++.+++.++
T Consensus 420 GSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr~~Pl~~g~~~rL~~lQrLaY~ 499 (720)
T PF03552_consen 420 GSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSRHCPLWYGYGGRLKFLQRLAYL 499 (720)
T ss_pred EecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhcCCchhccCCCCCcHHHHHHHH
Confidence 3568999999999999999999853 345688999999999999999999999886433444444 688999999876
Q ss_pred H
Q 040333 336 Y 336 (513)
Q Consensus 336 ~ 336 (513)
.
T Consensus 500 ~ 500 (720)
T PF03552_consen 500 N 500 (720)
T ss_pred H
Confidence 4
No 43
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.82 E-value=1.3e-19 Score=168.38 Aligned_cols=184 Identities=17% Similarity=0.250 Sum_probs=133.5
Q ss_pred EEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHH
Q 040333 87 LIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 87 sIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~g 166 (513)
||+||+||+++.++++|+|+.+|++|+.+++| |+|+|+|+|.+.+.+ +..+ .+.+. ..+++|++.|+|.|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~eviv-vDd~s~d~~~~~~~~-----~~~~--~~~~~--~~~~~g~~~a~n~~ 70 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIV-IDGGSTDGTVDIIKK-----YEDK--ITYWI--SEPDKGIYDAMNKG 70 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCceEEE-EeCCCCccHHHHHHH-----hHhh--cEEEE--ecCCcCHHHHHHHH
Confidence 69999999999999999999999999866544 667789998774433 2111 23333 33566799999999
Q ss_pred hhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCccc
Q 040333 167 LKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFG 238 (513)
Q Consensus 167 l~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (513)
++.+. ++|+|. |+++.+++..+.++++.+++.|.....+.+........ ...... ........
T Consensus 71 ~~~a~~~~v~~ld~D~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~ 141 (202)
T cd06433 71 IALATGDIIGFLNSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRR----PPPFLD-----KFLLYGMP 141 (202)
T ss_pred HHHcCCCEEEEeCCCcccCchHHHHHHHHHHhCCCccEEEeeeEEEcCCCCcccCCC----Ccchhh-----hHHhhcCc
Confidence 99984 468888 99999999777688899999998876654332211110 000000 01111122
Q ss_pred ccccchHhhHHHHHHhCCcCCC-CccchHHHHHHHHhCCCeEEEeccceecc
Q 040333 239 FNGTAGVWRIAAINEAGGWKDR-TTVEDMDLAVRASLKGWKFVYLGDLQVKS 289 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 289 (513)
+.|+++++||++++++|+|++. ..+||.+++.|+.++|+++.+.|++.++.
T Consensus 142 ~~~~~~~~~~~~~~~~~~f~~~~~~~~D~~~~~r~~~~g~~~~~~~~~~~~~ 193 (202)
T cd06433 142 ICHQATFFRRSLFEKYGGFDESYRIAADYDLLLRLLLAGKIFKYLPEVLAAF 193 (202)
T ss_pred ccCcceEEEHHHHHHhCCCchhhCchhhHHHHHHHHHcCCceEecchhhhhh
Confidence 4577789999999999999876 35899999999999999999999888763
No 44
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.81 E-value=1.5e-19 Score=169.95 Aligned_cols=191 Identities=17% Similarity=0.150 Sum_probs=134.1
Q ss_pred EEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCC-cEEEEEecCCCCCchhHHHH
Q 040333 87 LIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGI-NIRYQIRENRTGYKAGALKE 165 (513)
Q Consensus 87 sIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~-~i~~i~~~~~~g~Ka~aln~ 165 (513)
||+||+|||++.++++|+|+++|+||+.+++| |+|+|+|+|.+ ++++..+ +++ .++++ ..+.+.|+++++|.
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiV-vddgS~d~t~~-~~~~~~~----~~~~~~~~~-~~~~~~G~~~~~n~ 73 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELII-SDDGSTDGTVE-IIKEYID----KDPFIIILI-RNGKNLGVARNFES 73 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEE-EeCCCCCCcHH-HHHHHHh----cCCceEEEE-eCCCCccHHHHHHH
Confidence 69999999999999999999999999666544 67779998877 4444332 333 34444 55566779999999
Q ss_pred Hhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcc
Q 040333 166 GLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFF 237 (513)
Q Consensus 166 gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (513)
|++.+. ++|+|. |++|.+++..+.++++.+++++.....+.+............. ........ ......
T Consensus 74 g~~~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~ 150 (214)
T cd04196 74 LLQAADGDYVFFCDQDDIWLPDKLERLLKAFLKDDKPLLVYSDLELVDENGNPIGESFFEYQK--IKPGTSFN-NLLFQN 150 (214)
T ss_pred HHHhCCCCEEEEECCCcccChhHHHHHHHHHhcCCCceEEecCcEEECCCCCCcccccccccc--cCCccCHH-HHHHhC
Confidence 999874 468887 9999999999668889999999876554433221111000000 00000000 001111
Q ss_pred cccccchHhhHHHHHHhCCcCCC-CccchHHHHHHHHhCCCeEEEeccceec
Q 040333 238 GFNGTAGVWRIAAINEAGGWKDR-TTVEDMDLAVRASLKGWKFVYLGDLQVK 288 (513)
Q Consensus 238 ~~~G~~~~~Rr~~l~~~Gg~~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 288 (513)
...|+++++||++++++|++++. ...||.++..++.. |.++.+++++.+.
T Consensus 151 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~-~~~~~~~~~~~~~ 201 (214)
T cd04196 151 VVTGCTMAFNRELLELALPFPDADVIMHDWWLALLASA-FGKVVFLDEPLIL 201 (214)
T ss_pred ccCCceeeEEHHHHHhhccccccccccchHHHHHHHHH-cCceEEcchhHHH
Confidence 24688899999999999999887 67899999998877 6689999987654
No 45
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.81 E-value=5e-19 Score=177.25 Aligned_cols=195 Identities=16% Similarity=0.223 Sum_probs=133.5
Q ss_pred CCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchh
Q 040333 82 NFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAG 161 (513)
Q Consensus 82 ~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~ 161 (513)
..|.|||+||+||+++.+++||+|+++|+|++.|++| |+|+|+|+|.+. +++ +.++++++++++. +++|.+.
T Consensus 4 ~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIi-VdDgStD~t~~i-~~~----~~~~~~~i~vi~~--~n~G~~~ 75 (328)
T PRK10073 4 STPKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIII-VNDGSTDNSVEI-AKH----YAENYPHVRLLHQ--ANAGVSV 75 (328)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEE-EeCCCCccHHHH-HHH----HHhhCCCEEEEEC--CCCChHH
Confidence 3589999999999999999999999999999877655 888899999774 443 4445678888853 4677999
Q ss_pred HHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEE--EecCCCc--HH--HHHHHhh-hhhhhhHH
Q 040333 162 ALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWR--FVNANEC--LL--TRMQEMS-LDYHFKVE 226 (513)
Q Consensus 162 aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~--~~n~~~~--~~--~~~~~~~-~~~~~~~~ 226 (513)
|+|.|++.|. ++|+|. |++++++++.+ .+++.+++.+... ..+.+.. .. .+..... +.......
T Consensus 76 arN~gl~~a~g~yi~flD~DD~~~p~~l~~l~~~~-~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 154 (328)
T PRK10073 76 ARNTGLAVATGKYVAFPDADDVVYPTMYETLMTMA-LEDDLDVAQCNADWCFRDTGETWQSIPSDRLRSTGVLSGPDWLR 154 (328)
T ss_pred HHHHHHHhCCCCEEEEECCCCccChhHHHHHHHHH-HhCCCCEEEEccEEEEeCCCccccccccccccccceechHHHHH
Confidence 9999999985 468888 99999999987 4445555544432 2221110 00 0000000 00000000
Q ss_pred HHhhhhccCcccccccchHhhHHHHHHhCC-cCCCCccchHHHHHHHHhCCCeEEEeccceec
Q 040333 227 QEVGSATHAFFGFNGTAGVWRIAAINEAGG-WKDRTTVEDMDLAVRASLKGWKFVYLGDLQVK 288 (513)
Q Consensus 227 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 288 (513)
.... ...+.....+.++||+.+++.|. |++....||.++..++..++.++.+++++...
T Consensus 155 ~~l~---~~~~~~~~~~~l~Rr~~l~~~~~~f~~~~~~eD~~~~~~~~~~~~~v~~~~~~ly~ 214 (328)
T PRK10073 155 MALS---SRRWTHVVWLGVYRRDFIVKNNIKFEPGLHHQDIPWTTEVMFNALRVRYTEQSLYK 214 (328)
T ss_pred HHHh---hCCCCccHhHHHHHHHHHHHcCCccCCCCEeccHHHHHHHHHHCCEEEEECCCEEE
Confidence 0000 11111123467999999999874 66666689999999999999999999998654
No 46
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.81 E-value=2.2e-18 Score=165.91 Aligned_cols=203 Identities=16% Similarity=0.133 Sum_probs=136.6
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcC--CCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGL--SWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q--~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
...|+|||+||+|||++.++.+++++.++ ++++.+++| |+|+|+|+|.+. ++++.+++ ...+++++.. +++.|
T Consensus 6 ~~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiiv-vDdgS~D~t~~i-~~~~~~~~--~~~~v~~~~~-~~n~G 80 (243)
T PLN02726 6 EGAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIV-VDDGSPDGTQDV-VKQLQKVY--GEDRILLRPR-PGKLG 80 (243)
T ss_pred CCCceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEE-EeCCCCCCHHHH-HHHHHHhc--CCCcEEEEec-CCCCC
Confidence 44689999999999999999999988753 444444433 667799999774 44443332 1235666643 35567
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCC-C--cHHHHHHHhhhhhhhhHHH
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNAN-E--CLLTRMQEMSLDYHFKVEQ 227 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~-~--~~~~~~~~~~~~~~~~~~~ 227 (513)
+++|+|.|++.+. ++|+|. |+++.++++.+ .+++.++|.|.....+.. . .+..+........... .
T Consensus 81 ~~~a~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~r~~~~~~~~~~~~~r~~~~~~~~~~~~--~ 157 (243)
T PLN02726 81 LGTAYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQ-RETGADIVTGTRYVKGGGVHGWDLRRKLTSRGANVLAQ--T 157 (243)
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHH-HhcCCcEEEEccccCCCCcCCccHHHHHHHHHHHHHHH--H
Confidence 9999999999885 469998 99999999998 556788888875433221 1 1222221111111100 0
Q ss_pred HhhhhccCcccccccchHhhHHHHHHhCCcCC-CCccchHHHHHHHHhCCCeEEEeccceecccCCcC
Q 040333 228 EVGSATHAFFGFNGTAGVWRIAAINEAGGWKD-RTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPST 294 (513)
Q Consensus 228 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~-~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 294 (513)
. .........|++.++||+++++++.+.+ ....+|.|++.++.++|+++..+|.....+...+|
T Consensus 158 ~---~~~~~~d~~g~~~~~rr~~~~~i~~~~~~~~~~~~~el~~~~~~~g~~i~~vp~~~~~r~~g~s 222 (243)
T PLN02726 158 L---LWPGVSDLTGSFRLYKRSALEDLVSSVVSKGYVFQMEIIVRASRKGYRIEEVPITFVDRVYGES 222 (243)
T ss_pred H---hCCCCCcCCCcccceeHHHHHHHHhhccCCCcEEehHHHHHHHHcCCcEEEeCcEEeCCCCCcc
Confidence 0 1112333568888999999999986443 34578999999999999999999988776544333
No 47
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.81 E-value=1.2e-18 Score=165.34 Aligned_cols=196 Identities=17% Similarity=0.119 Sum_probs=132.9
Q ss_pred EEEecCCChHHHHHHHHHHHcCCC-CCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSW-PSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~y-p~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~g 166 (513)
|+||+|||++.++++|+|+.+|.+ ++.+++| |+|+|+|+|.+. .++ +.+++.++++++. +.++|+++|+|.|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiii-VDd~S~d~t~~~-~~~----~~~~~~~i~~~~~-~~n~G~~~a~n~g 73 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEIIV-VDDNSPDGTAEI-VRE----LAKEYPRVRLIVR-PGKRGLGSAYIEG 73 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEEEE-EeCCCCCChHHH-HHH----HHHhCCceEEEec-CCCCChHHHHHHH
Confidence 689999999999999999999998 4445443 667799999774 333 3334566777744 4567799999999
Q ss_pred hhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCccc
Q 040333 167 LKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFG 238 (513)
Q Consensus 167 l~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (513)
++.|. ++|+|. |+++..++..+ .+++.++|.|.......+...+...............+.. .......
T Consensus 74 ~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 150 (224)
T cd06442 74 FKAARGDVIVVMDADLSHPPEYIPELLEAQ-LEGGADLVIGSRYVEGGGVEGWGLKRKLISRGANLLARLL--LGRKVSD 150 (224)
T ss_pred HHHcCCCEEEEEECCCCCCHHHHHHHHHHH-hcCCCCEEEEeeeecCCccCCCcHHHHHHHHHHHHHHHHH--cCCCCCC
Confidence 99985 468888 99999999987 4556677777654332211100000000000000001110 1122333
Q ss_pred ccccchHhhHHHHHHhC-CcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCc
Q 040333 239 FNGTAGVWRIAAINEAG-GWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPS 293 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~G-g~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 293 (513)
..|+++++||++++++| ++......+|.|++.++.+.|+++.+.|.....+..-.
T Consensus 151 ~~~~~~~~~r~~~~~ig~~~~~~~~~~~~~l~~~~~~~g~~i~~~p~~~~~~~~g~ 206 (224)
T cd06442 151 PTSGFRAYRREVLEKLIDSLVSKGYKFQLELLVRARRLGYRIVEVPITFVDREHGE 206 (224)
T ss_pred CCCccchhhHHHHHHHhhhccCCCcEEeHHHHHHHHHcCCeEEEeCeEEeccCCCc
Confidence 56788899999999998 55555567889999999999999999998876654433
No 48
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.81 E-value=4.8e-19 Score=165.35 Aligned_cols=165 Identities=18% Similarity=0.207 Sum_probs=130.2
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHh
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGL 167 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl 167 (513)
|+||+|||++.++++|+|+++|++|+.+++| |+|+|+|+|.+.+.+ +.. ..++++++.+ .+.|.+.++|.|+
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiii-vD~~s~d~t~~~~~~-----~~~-~~~i~~~~~~-~n~g~~~~~n~~~ 72 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIV-IDNASTDGTAEWLTS-----LGD-LDNIVYLRLP-ENLGGAGGFYEGV 72 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEEE-EECCCCcchHHHHHH-----hcC-CCceEEEECc-cccchhhHHHHHH
Confidence 6899999999999999999999999777544 777899998774433 222 2236777554 4456888888888
Q ss_pred hhcc--------cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCc
Q 040333 168 KRSY--------VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAF 236 (513)
Q Consensus 168 ~~a~--------v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (513)
+.+. ++|+|. |++++++++.+ ++++++++.+.....+.
T Consensus 73 ~~a~~~~~d~v~~ld~D~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~------------------------------ 121 (202)
T cd04185 73 RRAYELGYDWIWLMDDDAIPDPDALEKLLAYA-DKDNPQFLAPLVLDPDG------------------------------ 121 (202)
T ss_pred HHHhccCCCEEEEeCCCCCcChHHHHHHHHHH-hcCCceEecceeEcCCC------------------------------
Confidence 7652 468888 99999999999 48889988876543321
Q ss_pred ccccccchHhhHHHHHHhCCcCCCC--ccchHHHHHHHHhCCCeEEEeccceecccCCcCH
Q 040333 237 FGFNGTAGVWRIAAINEAGGWKDRT--TVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTF 295 (513)
Q Consensus 237 ~~~~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~ 295 (513)
.++++++||+.++++|++++.. .+||.+++.|+.++|+++ ++|++.+.+..+.+.
T Consensus 122 ---~~~~~~~~~~~~~~~g~~~~~~~~~~eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~~ 178 (202)
T cd04185 122 ---SFVGVLISRRVVEKIGLPDKEFFIWGDDTEYTLRASKAGPGI-YVPDAVVVHKTAINK 178 (202)
T ss_pred ---ceEEEEEeHHHHHHhCCCChhhhccchHHHHHHHHHHcCCcE-EecceEEEEcccccc
Confidence 2356789999999999987753 489999999999999999 999999998876654
No 49
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.80 E-value=2.9e-19 Score=171.09 Aligned_cols=191 Identities=19% Similarity=0.234 Sum_probs=129.0
Q ss_pred EEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHH
Q 040333 88 IQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 88 IiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~g 166 (513)
++||+|||+ +.+++||+|+.+| ..+ |+|+||++|++.....+ . ...+++++..+ .+.|+++|+|.|
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q---~~~--iivvDn~s~~~~~~~~~-----~--~~~~i~~i~~~-~n~G~~~a~N~g 67 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ---VDK--VVVVDNSSGNDIELRLR-----L--NSEKIELIHLG-ENLGIAKALNIG 67 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc---CCE--EEEEeCCCCccHHHHhh-----c--cCCcEEEEECC-CceehHHhhhHH
Confidence 589999999 9999999999998 233 44566655555443333 1 24678877554 456699999999
Q ss_pred hhhc-----c---cccCCh---HHHHHHHH---HHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhh
Q 040333 167 LKRS-----Y---VKHCEY---PDYLRRAI---PYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSA 232 (513)
Q Consensus 167 l~~a-----~---v~DaD~---pd~L~~lv---~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (513)
++.+ . ++|+|. |++|++++ ..+.++++++++++.....+.... ....+... ............
T Consensus 68 ~~~a~~~~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~ 144 (237)
T cd02526 68 IKAALENGADYVLLFDQDSVPPPDMVEKLLAYKILSDKNSNIGAVGPRIIDRRTGEN-SPGVRKSG--YKLRIQKEGEEG 144 (237)
T ss_pred HHHHHhCCCCEEEEECCCCCcCHhHHHHHHHHHHhhccCCCeEEEeeeEEcCCCCee-ccceeccC--ccceecccccCC
Confidence 9987 2 468888 99999994 555467788887776543332211 11111000 000000000011
Q ss_pred ccCcccccccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEeccceecccCCcC
Q 040333 233 THAFFGFNGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYLGDLQVKSELPST 294 (513)
Q Consensus 233 ~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 294 (513)
........|+++++||++++++|||++... .||.|++.|+.++|+++.++|++.++++.+.+
T Consensus 145 ~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~~~ 208 (237)
T cd02526 145 LKEVDFLITSGSLISLEALEKVGGFDEDLFIDYVDTEWCLRARSKGYKIYVVPDAVLKHELGDK 208 (237)
T ss_pred ceEeeeeeccceEEcHHHHHHhCCCCHHHcCccchHHHHHHHHHcCCcEEEEcCeEEEecccCc
Confidence 111112346788999999999999998754 68999999999999999999999999887766
No 50
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.80 E-value=1.4e-18 Score=164.33 Aligned_cols=176 Identities=18% Similarity=0.189 Sum_probs=123.8
Q ss_pred EEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHH
Q 040333 86 VLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKE 165 (513)
Q Consensus 86 VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~ 165 (513)
|||+||+||+++.++++|+|+++|+|++.+++| |+|+|+|++.+.+.+ .+++++. .+.|++.|+|.
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~eviv-vdd~s~d~~~~~~~~----------~~~~~~~---~~~g~~~a~n~ 66 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIV-VDGGSTDGTVAIARS----------AGVVVIS---SPKGRARQMNA 66 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEE-EeCCCCccHHHHHhc----------CCeEEEe---CCcCHHHHHHH
Confidence 689999999999999999999999997766554 677788988774322 4555553 23458999999
Q ss_pred Hhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcc
Q 040333 166 GLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFF 237 (513)
Q Consensus 166 gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (513)
|++.+. ++|+|. |+++++++..+ .+++..++.......+.+ ...+.... .. ... ......
T Consensus 67 g~~~a~~~~i~~~D~D~~~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~------~~~-~~~~~~ 134 (221)
T cd02522 67 GAAAARGDWLLFLHADTRLPPDWDAAIIETL-RADGAVAGAFRLRFDDPG--PRLRLLEL--GA------NLR-SRLFGL 134 (221)
T ss_pred HHHhccCCEEEEEcCCCCCChhHHHHHHHHh-hcCCcEEEEEEeeecCCc--cchhhhhh--cc------cce-ecccCC
Confidence 999984 468888 99999998777 444554444444333322 11111100 00 000 011112
Q ss_pred cccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceec
Q 040333 238 GFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVK 288 (513)
Q Consensus 238 ~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 288 (513)
...++++++||++++++|||++....||.|++.|+.++|+++.+ |.+.+.
T Consensus 135 ~~~~~~~~~r~~~~~~~G~fd~~~~~ED~d~~~r~~~~G~~~~~-~~~~~~ 184 (221)
T cd02522 135 PYGDQGLFIRRELFEELGGFPELPLMEDVELVRRLRRRGRPALL-PSPVTT 184 (221)
T ss_pred CcCCceEEEEHHHHHHhCCCCccccccHHHHHHHHHhCCCEEEc-Cceeee
Confidence 23466889999999999999998889999999999999999877 665554
No 51
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.80 E-value=2.5e-18 Score=162.70 Aligned_cols=193 Identities=12% Similarity=0.096 Sum_probs=126.0
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEec---CCCCCchhHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPS-DRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRE---NRTGYKAGAL 163 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~-~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~---~~~g~Ka~al 163 (513)
|+||+||+++.+++||+|+.+|+||+ .+++| |+|+|+|+|.+ +++++.+++. ..+++++... +.+.|.+.|+
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiV-vDd~S~d~t~~-i~~~~~~~~~--~~~~~~~~~~~~~~~~~G~~~a~ 76 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGTLELSV-FNDASTDKSAE-IIEKWRKKLE--DSGVIVLVGSHNSPSPKGVGYAK 76 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEE-EeCCCCccHHH-HHHHHHHhCc--ccCeEEEEecccCCCCccHHHHH
Confidence 68999999999999999999999984 34333 66779999976 4554444322 2356655433 2345788999
Q ss_pred HHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCc-HHHHHHHhhhhhhhhHHHHhhhhcc
Q 040333 164 KEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANEC-LLTRMQEMSLDYHFKVEQEVGSATH 234 (513)
Q Consensus 164 n~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (513)
|.|++.+. ++|+|. |+++++++..+.+++. ++++++......+.. ...+... .........+. ....+
T Consensus 77 N~g~~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 153 (219)
T cd06913 77 NQAIAQSSGRYLCFLDSDDVMMPQRIRLQYEAALQHPN-SIIGCQVRRIPEDSTERYTRWIN-TLTREQLLTQV-YTSHG 153 (219)
T ss_pred HHHHHhcCCCEEEEECCCccCChhHHHHHHHHHHhCCC-cEEEEEEEecCcccchhhHHHHH-hcCHHHHHHHH-HhhcC
Confidence 99999884 479887 9999998888855554 455554433322211 1111110 00000000000 00011
Q ss_pred CcccccccchHhhHHHHHHhCCcCCCC--ccchHHHHHHHHhCCCeEEEeccceecc
Q 040333 235 AFFGFNGTAGVWRIAAINEAGGWKDRT--TVEDMDLAVRASLKGWKFVYLGDLQVKS 289 (513)
Q Consensus 235 ~~~~~~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 289 (513)
. +....++++||++++++|||++.. ..||++++.|+.++|+++.++|++....
T Consensus 154 ~--~~~~~~~~~rr~~~~~~g~f~~~~~~~~eD~~l~~r~~~~g~~i~~~~~~~~~y 208 (219)
T cd06913 154 P--TVIMPTWFCSREWFSHVGPFDEGGKGVPEDLLFFYEHLRKGGGVYRVDRCLLLY 208 (219)
T ss_pred C--ccccccceeehhHHhhcCCccchhccchhHHHHHHHHHHcCCceEEEcceeeee
Confidence 1 112234679999999999998753 4799999999999999999999987653
No 52
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.79 E-value=1.2e-18 Score=156.61 Aligned_cols=155 Identities=21% Similarity=0.316 Sum_probs=129.8
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHh
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGL 167 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl 167 (513)
|+||+||+.+.++++++|+.+|+++..+++| |+|+|+|++.+.+.+. ..+++++..+ .+.|+++|+|.|+
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iii-vdd~s~~~~~~~~~~~--------~~~~~~~~~~-~~~g~~~a~n~~~ 70 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIV-VDNASTDGSVELLREL--------FPEVRLIRNG-ENLGFGAGNNQGI 70 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEE-EECCCCchHHHHHHHh--------CCCeEEEecC-CCcChHHHhhHHH
Confidence 6899999999999999999999997766554 7777888887754431 2257776444 4566999999999
Q ss_pred hhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccc
Q 040333 168 KRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGF 239 (513)
Q Consensus 168 ~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (513)
+.+. ++|+|. |+++.+++..+.++++++++++. .
T Consensus 71 ~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------------------~ 112 (166)
T cd04186 71 REAKGDYVLLLNPDTVVEPGALLELLDAAEQDPDVGIVGPK--------------------------------------V 112 (166)
T ss_pred hhCCCCEEEEECCCcEECccHHHHHHHHHHhCCCceEEEcc--------------------------------------C
Confidence 9984 468888 99999999988788899988877 4
Q ss_pred cccchHhhHHHHHHhCCcCCCC--ccchHHHHHHHHhCCCeEEEeccceeccc
Q 040333 240 NGTAGVWRIAAINEAGGWKDRT--TVEDMDLAVRASLKGWKFVYLGDLQVKSE 290 (513)
Q Consensus 240 ~G~~~~~Rr~~l~~~Gg~~~~~--~~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 290 (513)
.|+++++||++++++|+|++.. ..||.+++.|+.++|+++.+.|++.++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~~~~~~h~ 165 (166)
T cd04186 113 SGAFLLVRREVFEEVGGFDEDFFLYYEDVDLCLRARLAGYRVLYVPQAVIYHH 165 (166)
T ss_pred ceeeEeeeHHHHHHcCCCChhhhccccHHHHHHHHHHcCCeEEEccceEEEec
Confidence 6899999999999999998864 47999999999999999999999988764
No 53
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.79 E-value=6.2e-19 Score=159.16 Aligned_cols=171 Identities=32% Similarity=0.490 Sum_probs=122.9
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcC-CcEEEEEecCCCCCchhHHHHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKG-INIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~-~~i~~i~~~~~~g~Ka~aln~g 166 (513)
|+||+|||++.+.++|+|+++|++++.+++| |+|+|+|+|.+.+.+ .. ... ..+.++ ...++.|++.++|.|
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iiv-vdd~s~d~t~~~~~~-~~----~~~~~~~~~~-~~~~~~g~~~~~n~~ 73 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIV-VDDGSTDDTLEILEE-LA----ALYIRRVLVV-RDKENGGKAGALNAG 73 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEE-EeCCCccchHHHHHH-Hh----ccccceEEEE-EecccCCchHHHHHH
Confidence 6899999999999999999999998777655 777788888775443 21 222 334455 444567799999999
Q ss_pred hhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCccc
Q 040333 167 LKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFG 238 (513)
Q Consensus 167 l~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (513)
++.+. ++|+|. |+++++++..+.++++++++++.....+.+.++........+...................
T Consensus 74 ~~~~~~~~i~~~D~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (180)
T cd06423 74 LRHAKGDIVVVLDADTILEPDALKRLVVPFFADPKVGAVQGRVRVRNGSENLLTRLQAIEYLSIFRLGRRAQSALGGVLV 153 (180)
T ss_pred HHhcCCCEEEEECCCCCcChHHHHHHHHHhccCCCeeeEeeeEEEecCcCcceeccchheecceeeeeeehhheecceee
Confidence 99984 468888 9999999777768899999999988776543333333322222111111111122344455
Q ss_pred ccccchHhhHHHHHHhCCcCCCCccch
Q 040333 239 FNGTAGVWRIAAINEAGGWKDRTTVED 265 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~~~~ED 265 (513)
.+|+++++||++++++|||++..++||
T Consensus 154 ~~g~~~~~~~~~~~~~ggf~~~~~~eD 180 (180)
T cd06423 154 LSGAFGAFRREALREVGGWDEDTLTED 180 (180)
T ss_pred cCchHHHHHHHHHHHhCCccccCcCCC
Confidence 789999999999999999999999998
No 54
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.78 E-value=4.4e-18 Score=155.92 Aligned_cols=168 Identities=20% Similarity=0.193 Sum_probs=122.1
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHh
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGL 167 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl 167 (513)
|+||+||+++.++++|+|+.+|+|++.+++| |+|+|+|+|.+. ++...+. ...++..+.+.+.+.++++++|.|+
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~t~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~n~g~ 75 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVII-ADDGSTEETKEL-IEEFKSQ---FPIPIKHVWQEDEGFRKAKIRNKAI 75 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEE-EeCCCchhHHHH-HHHHHhh---cCCceEEEEcCCcchhHHHHHHHHH
Confidence 6899999999999999999999999877655 777798888664 4432221 1234444444444447899999999
Q ss_pred hhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccc
Q 040333 168 KRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGF 239 (513)
Q Consensus 168 ~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (513)
+.+. ++|+|. |++++++++.+ +++..+++++.. .+.+... ...
T Consensus 76 ~~a~g~~i~~lD~D~~~~~~~l~~~~~~~--~~~~~v~g~~~~-~~~~~~~--------------------------~~~ 126 (182)
T cd06420 76 AAAKGDYLIFIDGDCIPHPDFIADHIELA--EPGVFLSGSRVL-LNEKLTE--------------------------RGI 126 (182)
T ss_pred HHhcCCEEEEEcCCcccCHHHHHHHHHHh--CCCcEEecceee-cccccce--------------------------eEe
Confidence 9884 479988 99999999987 556665555443 3322110 224
Q ss_pred cccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEe-ccceecc
Q 040333 240 NGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYL-GDLQVKS 289 (513)
Q Consensus 240 ~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~-~~~~~~~ 289 (513)
.|++++++|+.+.+.|||++... .||.|++.|+.++|++...+ +++.+++
T Consensus 127 ~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h 180 (182)
T cd06420 127 RGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFH 180 (182)
T ss_pred ccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeee
Confidence 57778889999999999998654 79999999999999665544 4666654
No 55
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.76 E-value=8.6e-18 Score=167.19 Aligned_cols=202 Identities=21% Similarity=0.261 Sum_probs=145.5
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhH
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGA 162 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~a 162 (513)
.|.++++|++||..+.+.+|++++.+|+|+...++ .|+++|+|++.+.+.+.. .++++++..+ .|.|=+++
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv-~vDn~s~d~~~~~~~~~~-------~~~v~~i~~~-~NlG~agg 72 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDDVIV-VVDNGSTDGSLEALKARF-------FPNVRLIENG-ENLGFAGG 72 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEE-EccCCCCCCCHHHHHhhc-------CCcEEEEEcC-CCccchhh
Confidence 47899999999999999999999999999966544 366679999988554421 4789999555 45557788
Q ss_pred HHHHhhhcc--------cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHH-h-hhhh-hhhHHH-
Q 040333 163 LKEGLKRSY--------VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQE-M-SLDY-HFKVEQ- 227 (513)
Q Consensus 163 ln~gl~~a~--------v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~-~-~~~~-~~~~~~- 227 (513)
.|.|++.|. +++-|. |++|+++++.++.++..+++++.....+... ....... . .... ......
T Consensus 73 ~n~g~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 151 (305)
T COG1216 73 FNRGIKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAAGVVGPLIRNYDESL-YIDRRGGESDGLTGGWRASPLL 151 (305)
T ss_pred hhHHHHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCCeEeeeeEecCCCCc-chheeccccccccccceecccc
Confidence 899998872 356666 9999999999988888888888776544221 1111110 0 0000 000000
Q ss_pred -H--hhhhccCcc-cccccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEeccceecccCCcC
Q 040333 228 -E--VGSATHAFF-GFNGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYLGDLQVKSELPST 294 (513)
Q Consensus 228 -~--~~~~~~~~~-~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 294 (513)
. ......... .++|+++++|+++++++|+|+++.. .||.|++.|+.++|+++.++|++.++|..-.+
T Consensus 152 ~~~~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~~F~y~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s 224 (305)
T COG1216 152 EIAPDLSSYLEVVASLSGACLLIRREAFEKVGGFDERFFIYYEDVDLCLRARKAGYKIYYVPDAIIYHKIGSS 224 (305)
T ss_pred cccccccchhhhhhhcceeeeEEcHHHHHHhCCCCcccceeehHHHHHHHHHHcCCeEEEeeccEEEEeccCC
Confidence 0 000001111 2689999999999999999999755 99999999999999999999999999865444
No 56
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.76 E-value=2.1e-17 Score=161.11 Aligned_cols=218 Identities=12% Similarity=0.041 Sum_probs=135.6
Q ss_pred CCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchh
Q 040333 82 NFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAG 161 (513)
Q Consensus 82 ~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~ 161 (513)
+.|.|||+||+||+++.++++|+|+++|+||+.|++| |+|+|+|. + ..++..+++ .+++++++.. +.++|.+.
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIV-VDDgS~~~--~-~~~~~~~~~--~~~ri~~i~~-~~n~G~~~ 75 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMII-VDDCSTSW--E-QLQQYVTAL--NDPRITYIHN-DINSGACA 75 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCCH--H-HHHHHHHHc--CCCCEEEEEC-CCCCCHHH
Confidence 3589999999999999999999999999999877655 77778753 2 233333322 3568888854 45677999
Q ss_pred HHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhh-hhhhhHHHHhhhh
Q 040333 162 ALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSL-DYHFKVEQEVGSA 232 (513)
Q Consensus 162 aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (513)
|+|.|++.|. ++|+|. |+.|+++++.+.+.++.+++.+.....+. ...........+ ...+......
T Consensus 76 a~N~gi~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~--- 151 (279)
T PRK10018 76 VRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQG-EVYSQPASLPLYPKSPYSRRLFY--- 151 (279)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCccHHHHHHHHHHhCCCccEEEccceeecC-cccccccccCCCCCCCCCHHHHH---
Confidence 9999999985 478888 99999999988554666666654322221 100000000000 0000000000
Q ss_pred ccCcccccccchHhhHHHHHHhCCcCCCC-ccchHHHHHHHHhCCCeEEEeccceec-ccCCcCHHHHHHHHHHhhhchh
Q 040333 233 THAFFGFNGTAGVWRIAAINEAGGWKDRT-TVEDMDLAVRASLKGWKFVYLGDLQVK-SELPSTFKAFRFQQHRWSCGPA 310 (513)
Q Consensus 233 ~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~-~~~p~t~~~~~~Qr~RW~~G~~ 310 (513)
..++.|+..+.++..+.+ ++|+++. .+||+|+..|+.++|++...+|++... +..+.+.+...+... .++..
T Consensus 152 ---~~n~ig~~~~~~~~~~~~-~~fd~~~~~~eDydlwlrl~~~~~~~~~~~~~l~~y~~~~~s~~~~~s~~k--~~~~~ 225 (279)
T PRK10018 152 ---KRNIIGNQVFTWAWRFKE-CLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKK--FSGYF 225 (279)
T ss_pred ---HhcCcCceeeehhhhhhh-cccCCCCCccccHHHHHHHHHhcCceEeeccceEEEEcCCCCccccCCHHH--HHHHH
Confidence 011235555666665554 6786653 489999999999999999999998543 333444421111111 34444
Q ss_pred HHHHHh
Q 040333 311 NLFRKM 316 (513)
Q Consensus 311 ~~~~~~ 316 (513)
+.++++
T Consensus 226 ~~~rk~ 231 (279)
T PRK10018 226 HFYRKH 231 (279)
T ss_pred HHHHHh
Confidence 666665
No 57
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.72 E-value=8.2e-16 Score=154.20 Aligned_cols=199 Identities=15% Similarity=0.098 Sum_probs=126.1
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCC------CCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEec
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLS------WPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRE 153 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~------yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~ 153 (513)
+..|.+||+||+|||++.++++++++.++. .|....+|+ |+|+|+|+|.+. .+++.++....+.+++++..+
T Consensus 67 ~~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i-~~~~~~~~~~~~~~i~vi~~~ 145 (333)
T PTZ00260 67 DSDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKV-AKDFWRQNINPNIDIRLLSLL 145 (333)
T ss_pred CCCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHH-HHHHHHhcCCCCCcEEEEEcC
Confidence 456789999999999999999999987531 232223333 667799999884 444443321123457887544
Q ss_pred CCCCCchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhc--CCCeEEEeeeEEEecCC-----CcHHHHHHHhh
Q 040333 154 NRTGYKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQ--NSDIALVQARWRFVNAN-----ECLLTRMQEMS 218 (513)
Q Consensus 154 ~~~g~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~--~~~v~~V~~~~~~~n~~-----~~~~~~~~~~~ 218 (513)
++.||++|+|.|++.+. .+|+|. |+.+.++++.+.+ +++.++|.|.......+ .++..+.....
T Consensus 146 -~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~~~~~~~~~~~~~r~~~~~~ 224 (333)
T PTZ00260 146 -RNKGKGGAVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHLVDSDVVAKRKWYRNILMYG 224 (333)
T ss_pred -CCCChHHHHHHHHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeeccccccCcccccCcHHHHHHHHH
Confidence 56679999999999885 469998 8999999888743 57788888876433221 12333322111
Q ss_pred hhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCC-cCCCCccchHHHHHHHHhCCCeEEEeccce
Q 040333 219 LDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGG-WKDRTTVEDMDLAVRASLKGWKFVYLGDLQ 286 (513)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~ 286 (513)
+ +.......+.... ....+.-++||++++++-. ...+...-|.++..++.+.|+++..+|-..
T Consensus 225 ~--~~l~~~~~~~~i~---D~~~Gfk~~~r~~~~~i~~~~~~~~~~fd~Ell~~a~~~g~~I~EvPv~~ 288 (333)
T PTZ00260 225 F--HFIVNTICGTNLK---DTQCGFKLFTRETARIIFPSLHLERWAFDIEIVMIAQKLNLPIAEVPVNW 288 (333)
T ss_pred H--HHHHHHHcCCCcc---cCCCCeEEEeHHHHHHHhhhccccCccchHHHHHHHHHcCCCEEEEceee
Confidence 1 1111111111111 1123445899999987611 111223568999999999999999988643
No 58
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.72 E-value=1.7e-16 Score=152.73 Aligned_cols=182 Identities=13% Similarity=0.040 Sum_probs=117.9
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHc---CCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCch
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACG---LSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKA 160 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~---q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka 160 (513)
|.||||||+||+++.++++|+|+.+ |.+++.|++| |+|+|+|+|.+.+.+ +.. ..+++++.. ++.|.+
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIV-vDdgStD~t~~i~~~-----~~~-~~~i~~i~~--~~~G~~ 71 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIV-VDGGSNDGTREFLEN-----LNG-IFNLRFVSE--PDNGIY 71 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEE-EECcCcccHHHHHHH-----hcc-cCCEEEEEC--CCCCHH
Confidence 6899999999999999999999975 3456555444 666799999875433 221 235777743 344799
Q ss_pred hHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhh
Q 040333 161 GALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSA 232 (513)
Q Consensus 161 ~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (513)
+|+|.|++.|. ++|+|. |+.++.+.. +..+++.+++.|.......+.....+.. . .. . .
T Consensus 72 ~A~N~Gi~~a~g~~v~~ld~DD~~~~~~~~~~~~-~~~~~~~~~v~g~~~~~~~~~~~~~~~~--~----~~--~----~ 138 (248)
T PRK10063 72 DAMNKGIAMAQGRFALFLNSGDIFHQDAANFVRQ-LKMQKDNAMIIGDALLDFGDGHKIKRSA--K----PG--W----Y 138 (248)
T ss_pred HHHHHHHHHcCCCEEEEEeCCcccCcCHHHHHHH-HHhCCCCeEEEeeeEEEcCCCcEEEEcc--C----Ch--h----H
Confidence 99999999985 468777 776544333 3234334444444332221111110000 0 00 0 0
Q ss_pred ccCcccccccchHhhHHHHHHhCCcCCCC-ccchHHHHHHHHhCCCeEEEeccceec
Q 040333 233 THAFFGFNGTAGVWRIAAINEAGGWKDRT-TVEDMDLAVRASLKGWKFVYLGDLQVK 288 (513)
Q Consensus 233 ~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~ 288 (513)
.......++.+.+++|+.++. |+|++.. .+||+|+..|+.++|+++.++|...+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~-~~fd~~~~~~~Dydl~lrl~~~g~~~~~v~~~l~~ 194 (248)
T PRK10063 139 IYHSLPASHQAIFFPVSGLKK-WRYDLQYKVSSDYALAARLYKAGYAFKKLNGLVSE 194 (248)
T ss_pred HhcCCCCCCcEEEEEHHHHhc-CCCCcccchHHhHHHHHHHHHcCCcEEEcCceeEE
Confidence 000112346778899998874 7787653 479999999999999999999998876
No 59
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.72 E-value=1.3e-16 Score=150.01 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=124.8
Q ss_pred EEEecCCChHHHHHHHHHHHcCCC----CCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCc-EEEEEecCCCCCchhH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSW----PSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGIN-IRYQIRENRTGYKAGA 162 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~y----p~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~-i~~i~~~~~~g~Ka~a 162 (513)
|+||+|||++.++++|+++.+|.+ ++.+++| |+|+|+|+|.+. .+++.++ .+. +++++.+ .+.|+++|
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiiv-vdd~S~D~t~~~-~~~~~~~----~~~~i~~i~~~-~n~G~~~a 73 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIV-VDDGSKDGTAEV-ARKLARK----NPALIRVLTLP-KNRGKGGA 73 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEE-EeCCCCCchHHH-HHHHHHh----CCCcEEEEEcc-cCCCcHHH
Confidence 689999999999999999998754 4555444 667799998774 4443332 333 4666444 45669999
Q ss_pred HHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCC----CcHHHHHHHhhhhhhhhHHHHhh
Q 040333 163 LKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNAN----ECLLTRMQEMSLDYHFKVEQEVG 230 (513)
Q Consensus 163 ln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----~~~~~~~~~~~~~~~~~~~~~~~ 230 (513)
+|.|++.|. ++|+|. |+++.+++..+ .+++.++|.|.......+ .++............ .....+
T Consensus 74 ~~~g~~~a~gd~i~~ld~D~~~~~~~l~~l~~~~-~~~~~~~v~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 150 (211)
T cd04188 74 VRAGMLAARGDYILFADADLATPFEELEKLEEAL-KTSGYDIAIGSRAHLASAAVVKRSWLRNLLGRGFNFL--VRLLLG 150 (211)
T ss_pred HHHHHHHhcCCEEEEEeCCCCCCHHHHHHHHHHH-hccCCcEEEEEeeccCCcccccccHHHHHHHHHHHHH--HHHHcC
Confidence 999999985 468888 99999999996 344566666664433221 122222221111111 000011
Q ss_pred hhccCcccccccchHhhHHHHHHhCCcC-CCCccchHHHHHHHHhCCCeEEEeccceecccCCc
Q 040333 231 SATHAFFGFNGTAGVWRIAAINEAGGWK-DRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPS 293 (513)
Q Consensus 231 ~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~-~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~ 293 (513)
........+..++||++++++++.. .....+|.|+..|+.++|+++.++| +.+.+.|.
T Consensus 151 ---~~~~d~~~g~~~~~r~~~~~~~~~~~~~~~~~d~el~~r~~~~g~~~~~vp--i~~~~~~~ 209 (211)
T cd04188 151 ---LGIKDTQCGFKLFTRDAARRLFPRLHLERWAFDVELLVLARRLGYPIEEVP--VRWVEIPG 209 (211)
T ss_pred ---CCCcccccCceeEcHHHHHHHHhhhhccceEeeHHHHHHHHHcCCeEEEcC--cceecCCC
Confidence 1111112345689999999987543 3445789999999999999999998 44555554
No 60
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.71 E-value=9e-17 Score=145.84 Aligned_cols=145 Identities=25% Similarity=0.369 Sum_probs=118.8
Q ss_pred CCchhHHHHHhhh-cc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHH
Q 040333 157 GYKAGALKEGLKR-SY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQ 227 (513)
Q Consensus 157 g~Ka~aln~gl~~-a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
.+|.+|+..+++. ++ +.|+|. ||+|++++.++ ++|++++|++.+...+. .++..++.......+....+
T Consensus 16 N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l-~~p~vglVt~~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 93 (175)
T PF13506_consen 16 NPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPL-ADPGVGLVTGLPRGVPA-RGFWSRLEAAFFNFLPGVLQ 93 (175)
T ss_pred ChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHH-hCCCCcEEEecccccCC-cCHHHHHHHHHHhHHHHHHH
Confidence 3699999999998 74 469999 99999999999 78999999998887775 46777765444432222222
Q ss_pred HhhhhccCcccccccchHhhHHHHHHhCCcCC--CCccchHHHHHHHHhCCCeEEEeccceecccCC----cCHHHHHHH
Q 040333 228 EVGSATHAFFGFNGTAGVWRIAAINEAGGWKD--RTTVEDMDLAVRASLKGWKFVYLGDLQVKSELP----STFKAFRFQ 301 (513)
Q Consensus 228 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p----~t~~~~~~Q 301 (513)
. ..+..+..|.++++||+.++++|||+. +.++||+.++.+++++|+++...+.+++.+..| .++++++++
T Consensus 94 a----~~~~~~~~G~~m~~rr~~L~~~GG~~~l~~~ladD~~l~~~~~~~G~~v~~~~~~v~~~~~~~~~~~s~~~~~~r 169 (175)
T PF13506_consen 94 A----LGGAPFAWGGSMAFRREALEEIGGFEALADYLADDYALGRRLRARGYRVVLSPYPVVQTSVPRTLEDSFRDFFRR 169 (175)
T ss_pred H----hcCCCceecceeeeEHHHHHHcccHHHHhhhhhHHHHHHHHHHHCCCeEEEcchheeecccCccccccHHHHHHH
Confidence 2 334555789999999999999999977 678999999999999999999999998877777 489999999
Q ss_pred HHHhhh
Q 040333 302 QHRWSC 307 (513)
Q Consensus 302 r~RW~~ 307 (513)
+.||++
T Consensus 170 ~~RW~r 175 (175)
T PF13506_consen 170 QLRWAR 175 (175)
T ss_pred HHhhcC
Confidence 999975
No 61
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.66 E-value=1.1e-15 Score=146.27 Aligned_cols=274 Identities=16% Similarity=0.194 Sum_probs=190.3
Q ss_pred hhHHHHHHHHHHHHhhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcccccCCCCCCeEEEEEecCCChHH
Q 040333 19 EDIAGQIGLIWELLKAPLIVPLLKLGVYICLAMSLMLFMERVYMGIKRYNWQPIEDDVELGSSNFPVVLIQIPMFNEKEV 98 (513)
Q Consensus 19 ~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~VsIiIP~yNE~~~ 98 (513)
.++-....+.|+...+....-. ... +...+.+...++.+|-..+..+. .++ ...+|.|||+.|..+-+++
T Consensus 30 ~~~~ll~g~~~l~~~l~~~a~~-g~v--f~~~l~~~h~ia~~Y~~y~lh~k--s~~-----~~~LPgVSiikPl~G~d~n 99 (431)
T KOG2547|consen 30 CPPCLLLGMGWLLAELDGFAVF-GFV--FVLVLYLVHIIAFCYGRYRLHKK--SKP-----DPKLPGVSIIKPLKGVDPN 99 (431)
T ss_pred CcHHHHHHHHHHHHHhhhheee-Eee--hhhHHHHHHHHHHHHHHHHhhcc--ccC-----CCCCCCceEEeecccCCch
Confidence 5566777788887666553111 111 11222222333333333322221 111 2368999999999999999
Q ss_pred HHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC--CchhHHHHHhhhcc-----
Q 040333 99 YKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTG--YKAGALKEGLKRSY----- 171 (513)
Q Consensus 99 l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g--~Ka~aln~gl~~a~----- 171 (513)
+...+||....+||++|+.. +.+++.|+.++ +++++.++|+ ..+.++....+..| .|-+|+--|.+.++
T Consensus 100 l~~Nlesffts~Y~~~ElLf-cv~s~eDpAi~-vv~~Ll~kyp--~VdAklf~gG~~vg~npKInN~mpgy~~a~ydlvl 175 (431)
T KOG2547|consen 100 LYHNLESFFTSQYHKYELLF-CVESSEDPAIE-VVERLLKKYP--NVDAKLFFGGEKVGLNPKINNMMPGYRAAKYDLVL 175 (431)
T ss_pred hHHhHHHHHhhccCceEEEE-EEccCCCcHHH-HHHHHHhhCC--CcceEEEEcccccccChhhhccCHHHHHhcCCEEE
Confidence 99999999999999888765 88999999988 7777888775 34555554443333 48888888888884
Q ss_pred cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhH
Q 040333 172 VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRI 248 (513)
Q Consensus 172 v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr 248 (513)
+.|+|. ||.+..++..+++..+.+.|.+.....++++--.+--| ..+...+.. ........++.|.+|-..+.||
T Consensus 176 isDsgI~m~pdtildm~t~M~shekmalvtq~py~~dr~Gf~atle~-~~fgTsh~r-~yl~~n~~~~~c~tgms~~mrK 253 (431)
T KOG2547|consen 176 ISDSGIFMKPDTILDMATTMMSHEKMALVTQTPYCKDRQGFDATLEQ-VYFGTSHPR-IYLSGNVLGFNCSTGMSSMMRK 253 (431)
T ss_pred EecCCeeecCchHHHHHHhhhcccceeeecCCceeeccccchhhhhh-eeeccCCce-EEEccccccccccccHHHHHHH
Confidence 357777 99999999999777789999988877776542222222 111111111 0112234456667899999999
Q ss_pred HHHHHhCCcCC--CCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhc
Q 040333 249 AAINEAGGWKD--RTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCG 308 (513)
Q Consensus 249 ~~l~~~Gg~~~--~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G 308 (513)
+++++.||... ..+.||+..+..+..+|||..+...+.-.+....+...+.+|-.||.+=
T Consensus 254 ~~ld~~ggi~~f~~yLaedyFaaksllSRG~ksaist~palQnSas~~mssf~~Ri~rwvkL 315 (431)
T KOG2547|consen 254 EALDECGGISAFGGYLAEDYFAAKSLLSRGWKSAISTHPALQNSASVTMSSFLDRIIRWVKL 315 (431)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhhHHHHHHHHHHHhhhh
Confidence 99999999765 3579999999999999999999888877777788888999999998654
No 62
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=99.63 E-value=2.5e-14 Score=152.80 Aligned_cols=136 Identities=17% Similarity=0.251 Sum_probs=121.3
Q ss_pred ccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHH
Q 040333 173 KHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIA 249 (513)
Q Consensus 173 ~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~ 249 (513)
.|+|. |+.+.++++.|..||++|+++| +..|..++++...|.++|...+..++..++..|++.|++|+..++|-+
T Consensus 447 vD~dT~~~P~ai~~lv~~f~~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish~l~Ka~ESvFG~VsclPGcfs~yR~~ 524 (862)
T KOG2571|consen 447 VDADTRLDPDALYHLVKVFDEDPQVGGACG--RILNKGGSWVVAYQNFEYAISHNLQKATESVFGCVSCLPGCFSLYRAS 524 (862)
T ss_pred ecCCCccCcHHHHHHHHHhccCcccceecc--ccccCCCceEEeHHHHHHHHHHHHHHhhhhhceeEEecCchhHHHHHH
Confidence 58888 9999999999988999999999 556777789999999999999999999999999999999999999998
Q ss_pred HHHHhCC-------cCC------CCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHHHHHHHHhhhchh
Q 040333 250 AINEAGG-------WKD------RTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPA 310 (513)
Q Consensus 250 ~l~~~Gg-------~~~------~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~ 310 (513)
++.+--. +.+ ..++||..|+.++..+||++.|++++.+.++.|+++..++.||+||..|.+
T Consensus 525 aL~~~~~~~~y~~~~~~~~~~~~~~~geDR~L~~~llskgy~l~Y~a~s~a~t~~Pe~~~efl~QrrRW~~s~f 598 (862)
T KOG2571|consen 525 ALMDQFVEYFYGEKFSGPRHGIQYSLGEDRWLCTLLLSKGYRLKYVAASDAETEAPESFLEFLNQRRRWLNSIF 598 (862)
T ss_pred HHhcchHHhhhchhhcCcccccccccchhHHHHHHHHhccceeeeeccccccccCcHhHHHHHHHhhhhcccch
Confidence 8766320 111 136999999999999999999999999999999999999999999999943
No 63
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.62 E-value=3.2e-15 Score=137.11 Aligned_cols=171 Identities=16% Similarity=0.121 Sum_probs=111.8
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEE-cCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVL-DDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~-DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~g 166 (513)
|+||+|||++.+.++|+|+.+|.|+....+|+|+ |+|+|+|.+. .+... .+...++++..+ .+.|+++|+|.|
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~-~~~~~----~~~~~~~~~~~~-~n~G~~~a~n~g 74 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEI-ARELA----ARVPRVRVIRLS-RNFGKGAAVRAG 74 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHH-HHHHH----HhCCCeEEEEcc-CCCCccHHHHHH
Confidence 6899999999999999999999883333444455 5577887664 44332 334566666444 455699999999
Q ss_pred hhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCC--CcHHHHHHHhhhhhhhhHHHHhhhhccCc
Q 040333 167 LKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNAN--ECLLTRMQEMSLDYHFKVEQEVGSATHAF 236 (513)
Q Consensus 167 l~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (513)
++.+. ++|+|. |++|++++..+ .+++.++|.|.....+.. .....+........ ... .......
T Consensus 75 ~~~a~gd~i~~lD~D~~~~~~~l~~l~~~~-~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~ 148 (185)
T cd04179 75 FKAARGDIVVTMDADLQHPPEDIPKLLEKL-LEGGADVVIGSRFVRGGGAGMPLLRRLGSRLFNF--LIR---LLLGVRI 148 (185)
T ss_pred HHHhcCCEEEEEeCCCCCCHHHHHHHHHHH-hccCCcEEEEEeecCCCcccchHHHHHHHHHHHH--HHH---HHcCCCC
Confidence 99985 468887 99999999986 345678888876655432 22222222111111 000 1012223
Q ss_pred ccccccchHhhHHHHHHh--CCcCCCCccchHHHHHH
Q 040333 237 FGFNGTAGVWRIAAINEA--GGWKDRTTVEDMDLAVR 271 (513)
Q Consensus 237 ~~~~G~~~~~Rr~~l~~~--Gg~~~~~~~ED~~l~~r 271 (513)
....|+++++||++++++ |+++. .+.+|+++.+|
T Consensus 149 ~~~~~~~~~~~r~~~~~i~~~~~~~-~~~~~~~~~~~ 184 (185)
T cd04179 149 SDTQSGFRLFRREVLEALLSLLESN-GFEFGLELLVG 184 (185)
T ss_pred cCCCCceeeeHHHHHHHHHhhcccc-CcceeeEeeec
Confidence 335688889999999999 45544 46677777655
No 64
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.61 E-value=2.2e-14 Score=140.93 Aligned_cols=196 Identities=19% Similarity=0.278 Sum_probs=121.3
Q ss_pred EEEEecCCCh------HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCC--CC
Q 040333 87 LIQIPMFNEK------EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRT--GY 158 (513)
Q Consensus 87 sIiIP~yNE~------~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~--g~ 158 (513)
|||||++|+. +.+..++.++..+.-+ .+++|+|+|++++++....+++.+++ ....+++..+..+ -+
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~-~~~eiIvvd~~s~~~~~~~l~~~~~~----~~~~~~i~~~~~~~~f~ 75 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSD-PDFEIIVVDDGSSDEFDEELKKLCEK----NGFIRYIRHEDNGEPFS 75 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCchhHHHHHHHHHhc----cCceEEEEcCCCCCCcC
Confidence 7999999998 3455557777763323 34555566654444432233333332 2334365433222 37
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHH---HhhcCCCeEEEeeeEEEecCCCcHHHHHHHhh-hhhhhhHH
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIP---YLVQNSDIALVQARWRFVNANECLLTRMQEMS-LDYHFKVE 226 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~---~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~-~~~~~~~~ 226 (513)
++.|+|.|++.|. ++|+|. |+++++++. .+.++++ .++..+..+.+.+.+. ...... ........
T Consensus 76 ~a~arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~-~~~~~p~~yl~~~~~~--~~~~~~~~~~~~~~~ 152 (281)
T PF10111_consen 76 RAKARNIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPN-AFLVYPCLYLSEEGSE--KFYSQFKNLWDHEFL 152 (281)
T ss_pred HHHHHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCC-ceEEEeeeeccchhhH--HHhhcchhcchHHHH
Confidence 9999999999985 469999 999999999 5633433 3344444455543321 111110 00001111
Q ss_pred HHh---hhhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccceeccc
Q 040333 227 QEV---GSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQVKSE 290 (513)
Q Consensus 227 ~~~---~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 290 (513)
+.. .+.........|++++++|+.+.++|||+++.. .||.|++.|+.+.|.++...++..+++.
T Consensus 153 ~~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~ 222 (281)
T PF10111_consen 153 ESFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHS 222 (281)
T ss_pred HHHhhccccccccccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhcccc
Confidence 111 111222233567999999999999999999863 7999999999999999999999988653
No 65
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.61 E-value=2.4e-14 Score=141.70 Aligned_cols=190 Identities=15% Similarity=0.117 Sum_probs=118.4
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCC-C-CCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSW-P-SDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~y-p-~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
...|++||+||+|||++.|.++|+++.+|.+ + .++++| |+|+|+|+|.+.+.+ ...+. ......+.....+.|
T Consensus 28 ~~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIV-VDDgStD~T~~ia~~-~~~~v---~~~~~~~~~~~~n~G 102 (306)
T PRK13915 28 KAGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIV-IDSGSTDATAERAAA-AGARV---VSREEILPELPPRPG 102 (306)
T ss_pred cCCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEE-EeCCCccHHHHHHHH-hcchh---hcchhhhhccccCCC
Confidence 4568999999999999999999999998765 2 244433 667799999885433 21110 001112212245667
Q ss_pred chhHHHHHhhhcc-----cccCCh----HHHHHHHHHHhhcCCCeEEEeeeEEEec--------CCCcHHHHHHHhhhhh
Q 040333 159 KAGALKEGLKRSY-----VKHCEY----PDYLRRAIPYLVQNSDIALVQARWRFVN--------ANECLLTRMQEMSLDY 221 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~----pd~L~~lv~~~~~~~~v~~V~~~~~~~n--------~~~~~~~~~~~~~~~~ 221 (513)
|+.|+|.|++.+. ++|+|. |+++.+++.++..++++++|.|.....- ...+..++... ..
T Consensus 103 kg~A~~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~~~~~~~V~g~~~r~~~~~~~~~~~~~gr~~~~~~---~~ 179 (306)
T PRK13915 103 KGEALWRSLAATTGDIVVFVDADLINFDPMFVPGLLGPLLTDPGVHLVKAFYRRPLRVSGGVDATGGGRVTELVA---RP 179 (306)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCccccCCHHHHHHHHHHHHhCCCceEEEEEeccccccccccCcCCCCchHHHHH---HH
Confidence 9999999999874 468886 9999999999866889999988532110 00111122111 00
Q ss_pred hhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHh-CCC-eEEEec
Q 040333 222 HFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASL-KGW-KFVYLG 283 (513)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~-~G~-ki~~~~ 283 (513)
.+.... ..........++..++||++++++. ++.+ ...|.++...+.+ .|. ++..++
T Consensus 180 l~~~~~---~~l~~i~dp~sG~~a~rr~~l~~l~-~~~~-yg~e~~~l~~~~~~~g~~~i~~V~ 238 (306)
T PRK13915 180 LLNLLR---PELAGFVQPLGGEYAGRRELLESLP-FVPG-YGVEIGLLIDTLDRLGLDAIAQVD 238 (306)
T ss_pred HHHHHH---HhhhcccCcchHhHHHHHHHHHhCC-CCCC-CeehHHHHHHHHHHhCcCceEEEE
Confidence 111100 0111122222445799999999984 5543 5568888888764 576 665555
No 66
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.61 E-value=2.4e-16 Score=141.38 Aligned_cols=161 Identities=21% Similarity=0.257 Sum_probs=105.3
Q ss_pred EEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHH
Q 040333 87 LIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 87 sIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~g 166 (513)
||+||+||+++.++++|+|+.+|++++.+++| |+|+|+|+|.+. +++ +.+.+.++++++.+++ .|++.++|.|
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiiv-vdd~s~d~~~~~-~~~----~~~~~~~i~~i~~~~n-~g~~~~~n~~ 73 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIV-VDDGSTDETEEI-LEE----YAESDPNIRYIRNPEN-LGFSAARNRG 73 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEE-EECS-SSSHHHH-HHH----HHCCSTTEEEEEHCCC-SHHHHHHHHH
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEE-eccccccccccc-ccc----cccccccccccccccc-cccccccccc
Confidence 79999999999999999999999777766544 677788888664 443 3335678999976644 4799999999
Q ss_pred hhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCccc
Q 040333 167 LKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFG 238 (513)
Q Consensus 167 l~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (513)
++.+. ++|+|. |+++++++..+.++ +.+++.+.....+.+...............................
T Consensus 74 ~~~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (169)
T PF00535_consen 74 IKHAKGEYILFLDDDDIISPDWLEELVEALEKN-PPDVVIGSVIYIDDDNRYPDRRLRFSFWNRFERKIFNNIRFWKISF 152 (169)
T ss_dssp HHH--SSEEEEEETTEEE-TTHHHHHHHHHHHC-TTEEEEEEEEEEECTTETEECCCTSEEEECCHCHHHHTTHSTTSSE
T ss_pred ccccceeEEEEeCCCceEcHHHHHHHHHHHHhC-CCcEEEEEEEEecCCccccccccchhhhhhhhhHHHHhhhcCCccc
Confidence 99985 468888 89999999999554 4455555554443332211111000000011111122333444455
Q ss_pred ccccchHhhHHHHHHhC
Q 040333 239 FNGTAGVWRIAAINEAG 255 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~G 255 (513)
..|++.++||++++++|
T Consensus 153 ~~~~~~~~rr~~~~~~~ 169 (169)
T PF00535_consen 153 FIGSCALFRRSVFEEIG 169 (169)
T ss_dssp ESSSCEEEEEHHHHHCH
T ss_pred ccccEEEEEHHHHHhhC
Confidence 67999999999999975
No 67
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.60 E-value=5.1e-15 Score=145.67 Aligned_cols=188 Identities=15% Similarity=0.111 Sum_probs=121.4
Q ss_pred cCCC-hHHHHHHHHHHHcCCCCCCceEEEEEcCCCcH-HHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhh
Q 040333 92 MFNE-KEVYKISIGAACGLSWPSDRLVIQVLDDSTDP-AIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKR 169 (513)
Q Consensus 92 ~yNE-~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~-t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~ 169 (513)
+||. .+.++++++|+++|. +++ |+|+|+|+|+ +.+.+. +..+++++++.+ .|.|.++|+|.|++.
T Consensus 2 tyn~~~~~l~~~l~sl~~q~---~~i-iVVDN~S~~~~~~~~~~--------~~~~~i~~i~~~-~N~G~a~a~N~Gi~~ 68 (281)
T TIGR01556 2 TFNPDLEHLGELITSLPKQV---DRI-IAVDNSPHSDQPLKNAR--------LRGQKIALIHLG-DNQGIAGAQNQGLDA 68 (281)
T ss_pred ccCccHHHHHHHHHHHHhcC---CEE-EEEECcCCCcHhHHHHh--------ccCCCeEEEECC-CCcchHHHHHHHHHH
Confidence 7997 489999999999985 333 3255556544 443322 234678888644 556699999999998
Q ss_pred cc--------cccCCh---HHHHHHHHHHhhcCC-CeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcc
Q 040333 170 SY--------VKHCEY---PDYLRRAIPYLVQNS-DIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFF 237 (513)
Q Consensus 170 a~--------v~DaD~---pd~L~~lv~~~~~~~-~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (513)
|. ++|.|. |++++++++.+.+++ +++++++.....+. ............... ..............
T Consensus 69 a~~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 146 (281)
T TIGR01556 69 SFRRGVQGVLLLDQDSRPGNAFLAAQWKLLSAENGQACALGPRFFDRGT-SRRLPAIHLDGLLLR-QISLDGLTTPQKTS 146 (281)
T ss_pred HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHhcCCceEEECCeEEcCCC-cccCCceeeccccee-eecccccCCceecc
Confidence 72 468888 999999999985554 78888766432221 110000000000000 00000000001111
Q ss_pred cccccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEeccceecccCCcC
Q 040333 238 GFNGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYLGDLQVKSELPST 294 (513)
Q Consensus 238 ~~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 294 (513)
...++++++||++++++|+|+++.. .||.|+++|+.++|+++.++|++.+.++...+
T Consensus 147 ~~~~sg~li~~~~~~~iG~fde~~fi~~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g~~ 205 (281)
T TIGR01556 147 FLISSGCLITREVYQRLGMMDEELFIDHVDTEWSLRAQNYGIPLYIDPDIVLEHRIGDS 205 (281)
T ss_pred EEEcCcceeeHHHHHHhCCccHhhcccchHHHHHHHHHHCCCEEEEeCCEEEEEecCCc
Confidence 1234567899999999999998753 79999999999999999999999998876654
No 68
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.59 E-value=5.1e-13 Score=133.65 Aligned_cols=184 Identities=15% Similarity=0.181 Sum_probs=115.7
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHH---cCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCc
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAAC---GLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYK 159 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~---~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~K 159 (513)
.+++||+||+|||++.++++++++. ++..++.|++| |+|+|+|+|.+.+.+ ..++ .+.+++.+.. +++.||
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIv-VDDgS~D~T~~il~~-~~~~---~~~~v~~i~~-~~n~G~ 78 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILL-IDDGSSDNSAEMLVE-AAQA---PDSHIVAILL-NRNYGQ 78 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEE-EeCCCCCcHHHHHHH-HHhh---cCCcEEEEEe-CCCCCH
Confidence 4679999999999999999998875 34444445433 777799999885443 2221 2456665533 466789
Q ss_pred hhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhh
Q 040333 160 AGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGS 231 (513)
Q Consensus 160 a~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (513)
++|++.|+++|. ++|+|. |+.+.++++.+.+ +.++|.+... +...++..+.-...+.... ....+.
T Consensus 79 ~~A~~~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~~~--~~DvV~~~r~--~~~~~~~r~~~s~~~~~l~--~~~~g~ 152 (325)
T PRK10714 79 HSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE--GYDVVGTVRQ--NRQDSWFRKTASKMINRLI--QRTTGK 152 (325)
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHHh--hCCEEEEEEc--CCCCcHHHHHHHHHHHHHH--HHHcCC
Confidence 999999999985 479999 9999999999843 4567766543 3334555544322211111 111111
Q ss_pred hccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccc
Q 040333 232 ATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDL 285 (513)
Q Consensus 232 ~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 285 (513)
... ...+..-++||++++++-...+. +..+...+...|+++..+|-.
T Consensus 153 ~~~---d~~~gfr~~~r~~~~~l~~~~~~----~~~~~~l~~~~g~~i~evpv~ 199 (325)
T PRK10714 153 AMG---DYGCMLRAYRRHIVDAMLHCHER----STFIPILANTFARRAIEIPVH 199 (325)
T ss_pred CCC---CCCcCeEEEcHHHHHHHHHCCCC----ccHHHHHHHHcCCCEEEEEeE
Confidence 111 11223347999999988444332 223445566779988877743
No 69
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.58 E-value=1.9e-14 Score=131.78 Aligned_cols=167 Identities=15% Similarity=0.136 Sum_probs=111.5
Q ss_pred EEEecCCChHHHHHHHHHHHcC---CCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHH
Q 040333 88 IQIPMFNEKEVYKISIGAACGL---SWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALK 164 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q---~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln 164 (513)
|+||+|||++.+.++++++.++ ++++.+++| |+|+|+|+|.+. .+. +..+.++++++... ++.|+++|+|
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiiv-vdd~s~d~t~~~-~~~----~~~~~~~i~~i~~~-~n~G~~~a~n 73 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIF-VDDGSTDRTLEI-LRE----LAARDPRVKVIRLS-RNFGQQAALL 73 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEE-EeCCCCccHHHH-HHH----HHhhCCCEEEEEec-CCCCcHHHHH
Confidence 6899999999999999988754 355555444 677799998774 443 33345678887554 4567999999
Q ss_pred HHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCc
Q 040333 165 EGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAF 236 (513)
Q Consensus 165 ~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (513)
.|++.+. ++|+|. |+++++++..+ +++.++|.|.....+ .+...+.....+.... .. ......
T Consensus 74 ~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~--~~~~~~v~g~~~~~~--~~~~~~~~~~~~~~~~---~~--~~~~~~ 144 (181)
T cd04187 74 AGLDHARGDAVITMDADLQDPPELIPEMLAKW--EEGYDVVYGVRKNRK--ESWLKRLTSKLFYRLI---NK--LSGVDI 144 (181)
T ss_pred HHHHhcCCCEEEEEeCCCCCCHHHHHHHHHHH--hCCCcEEEEEecCCc--chHHHHHHHHHHHHHH---HH--HcCCCC
Confidence 9999884 468888 99999999986 335667777655443 3344433221111111 10 011222
Q ss_pred ccccccchHhhHHHHHHhCCcCCCCc-cchHHHHH
Q 040333 237 FGFNGTAGVWRIAAINEAGGWKDRTT-VEDMDLAV 270 (513)
Q Consensus 237 ~~~~G~~~~~Rr~~l~~~Gg~~~~~~-~ED~~l~~ 270 (513)
....|+..++||++++++|+|++... .+|.+..+
T Consensus 145 ~~~~~~~~~~~r~~~~~i~~~d~~~~~~~~~~~~~ 179 (181)
T cd04187 145 PDNGGDFRLMDRKVVDALLLLPERHRFLRGLIAWV 179 (181)
T ss_pred CCCCCCEEEEcHHHHHHHHhcCCCCccHHHHHHHh
Confidence 23457888999999999999998654 56665543
No 70
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.41 E-value=3e-12 Score=112.32 Aligned_cols=145 Identities=23% Similarity=0.323 Sum_probs=110.4
Q ss_pred EEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHh
Q 040333 88 IQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGL 167 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl 167 (513)
|+||++|+.+.++++++|+.+++++..++.| ++|+++|++.+.+.+ ..+ ....+.... ...+.|+++++|.++
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~i~i-~~~~~~~~~~~~~~~-~~~----~~~~~~~~~-~~~~~g~~~~~~~~~ 73 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIV-VDDGSTDGTLEILEE-YAK----KDPRVIRVI-NEENQGLAAARNAGL 73 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceEEEE-EeCCCCccHHHHHHH-HHh----cCCCeEEEE-ecCCCChHHHHHHHH
Confidence 6899999999999999999999987666443 556677776664333 221 123344443 345667999999999
Q ss_pred hhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccc
Q 040333 168 KRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGF 239 (513)
Q Consensus 168 ~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (513)
+.+. ++|+|. |+++..++..+..+++.+++++.
T Consensus 74 ~~~~~d~v~~~d~D~~~~~~~~~~~~~~~~~~~~~~~v~~~--------------------------------------- 114 (156)
T cd00761 74 KAARGEYILFLDADDLLLPDWLERLVAELLADPEADAVGGP--------------------------------------- 114 (156)
T ss_pred HHhcCCEEEEECCCCccCccHHHHHHHHHhcCCCceEEecc---------------------------------------
Confidence 8873 468888 89999986655578888888776
Q ss_pred cccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEE
Q 040333 240 NGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFV 280 (513)
Q Consensus 240 ~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~ 280 (513)
++++++++.++++|++++... .||.++..++...|++..
T Consensus 115 --~~~~~~~~~~~~~~~~~~~~~~~~ed~~~~~~~~~~g~~~~ 155 (156)
T cd00761 115 --GNLLFRRELLEEIGGFDEALLSGEEDDDFLLRLLRGGKVAF 155 (156)
T ss_pred --chheeeHHHHHHhCCcchHhcCCcchHHHHHHHHhhccccc
Confidence 667899999999999987655 599999999999887653
No 71
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=99.36 E-value=1.5e-11 Score=107.29 Aligned_cols=193 Identities=16% Similarity=0.183 Sum_probs=122.6
Q ss_pred CeEEEEEecCCChHHHHHHHH---HHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCch
Q 040333 84 PVVLIQIPMFNEKEVYKISIG---AACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKA 160 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~---sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka 160 (513)
++.||++|+|||.+++.-++. ....+.-.+.|++| |+|+|.|.|.+ .++++.+.+ .+.+|.+..|.+..| -+
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIi-vDD~SpDGt~~-~a~~L~k~y--g~d~i~l~pR~~klG-Lg 77 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIII-VDDASPDGTQE-VAKALQKIY--GEDNILLKPRTKKLG-LG 77 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEE-EeCCCCCccHH-HHHHHHHHh--CCCcEEEEeccCccc-ch
Confidence 678999999999976664443 33333333345443 77779999987 556555444 356788887765444 77
Q ss_pred hHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCc---HHHHHHHhhhhhhhhHHHHh
Q 040333 161 GALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANEC---LLTRMQEMSLDYHFKVEQEV 229 (513)
Q Consensus 161 ~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~---~~~~~~~~~~~~~~~~~~~~ 229 (513)
.|--.|+++|. ++|||. |.++.++++.. .+.+.++|.|.....+..-. ...+..+..-+ + ..+..
T Consensus 78 tAy~hgl~~a~g~fiviMDaDlsHhPk~ipe~i~lq-~~~~~div~GTRYa~~ggV~gW~mkRk~IS~gAn--~-la~~l 153 (238)
T KOG2978|consen 78 TAYIHGLKHATGDFIVIMDADLSHHPKFIPEFIRLQ-KEGNYDIVLGTRYAGGGGVYGWDMKRKIISRGAN--F-LARIL 153 (238)
T ss_pred HHHHhhhhhccCCeEEEEeCccCCCchhHHHHHHHh-hccCcceeeeeeEcCCCceecchhhHHHHhhhhH--H-HHHHh
Confidence 78889999995 579999 99999999877 56677888887654443221 12222111111 1 11111
Q ss_pred hhhccCcccccccchHhhHHHHHHhCC-cCCCCccchHHHHHHHHhCCCeEEEecccee
Q 040333 230 GSATHAFFGFNGTAGVWRIAAINEAGG-WKDRTTVEDMDLAVRASLKGWKFVYLGDLQV 287 (513)
Q Consensus 230 ~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~ 287 (513)
-..+...++|++.++||++++..-. -...-..-.+++..|+.+.|+.+.-+|-..+
T Consensus 154 --l~~~~sdltGsFrLykk~vl~~li~e~vSkGyvfqmEll~ra~~~~y~IgEvPitFv 210 (238)
T KOG2978|consen 154 --LNPGVSDLTGSFRLYKKEVLEKLIEESVSKGYVFQMELLARARQHGYTIGEVPITFV 210 (238)
T ss_pred --ccCCCccCcceeeeehHHHHHhhHHHhhccchhhhHHHHHhccccCceEeecceEEE
Confidence 1123445779999999999877410 0011124568899999999998877775544
No 72
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.17 E-value=2.8e-10 Score=108.49 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=74.9
Q ss_pred eEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHH
Q 040333 85 VVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALK 164 (513)
Q Consensus 85 ~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln 164 (513)
++||+||+|||++.+++||+|+..|. ++++| |+|+|+|+|.+.+.+ .++++++. .+.|.+.++|
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~---~eiiv-vD~gStD~t~~i~~~----------~~~~v~~~--~~~g~~~~~n 64 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV---DEIIV-VDSGSTDRTVEIAKE----------YGAKVYQR--WWDGFGAQRN 64 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc---CEEEE-EeCCCCccHHHHHHH----------cCCEEEEC--CCCChHHHHH
Confidence 48999999999999999999998773 34443 777799999774332 35566655 5567999999
Q ss_pred HHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEE
Q 040333 165 EGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALV 197 (513)
Q Consensus 165 ~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V 197 (513)
.|++.+. ++|+|. |++++++.+.+.++|..+..
T Consensus 65 ~~~~~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~~~~~~~~ 105 (229)
T cd02511 65 FALELATNDWVLSLDADERLTPELADEILALLATDDYDGYY 105 (229)
T ss_pred HHHHhCCCCEEEEEeCCcCcCHHHHHHHHHHHhCCCCcEEE
Confidence 9999884 479998 99999999998666653333
No 73
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.06 E-value=4.5e-10 Score=104.14 Aligned_cols=98 Identities=22% Similarity=0.267 Sum_probs=72.3
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhH
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGA 162 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~a 162 (513)
.|.+||+||+||+++.+.++|+|+++|+|++.+ +|+|+|+|+|+|.+.+.+ ... ...++... ...++.|++.|
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~-~~~----~~~~~~~~-~~~~~~g~~~~ 74 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIE-YGA----KDVRVIRL-INERNGGLGAA 74 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHH-Hhh----hcceEEEe-ecccCCChHHH
Confidence 489999999999999999999999999999867 444788899999885444 222 12233333 34466779999
Q ss_pred HHHHhhhcc-----cccCCh--HHHHHHHHHH
Q 040333 163 LKEGLKRSY-----VKHCEY--PDYLRRAIPY 187 (513)
Q Consensus 163 ln~gl~~a~-----v~DaD~--pd~L~~lv~~ 187 (513)
+|.|+..+. .+|+|. ++.+..+...
T Consensus 75 ~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~ 106 (291)
T COG0463 75 RNAGLEYARGDYIVFLDADDQHPPELIPLVAA 106 (291)
T ss_pred HHhhHHhccCCEEEEEccCCCCCHHHHHHHHH
Confidence 999999874 357777 5555554433
No 74
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=99.02 E-value=4.1e-08 Score=91.80 Aligned_cols=199 Identities=16% Similarity=0.095 Sum_probs=116.0
Q ss_pred eEEEEEecCCChHHHH----HHHHHHHcCCC---CCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCC
Q 040333 85 VVLIQIPMFNEKEVYK----ISIGAACGLSW---PSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRT 156 (513)
Q Consensus 85 ~VsIiIP~yNE~~~l~----~~l~sl~~q~y---p~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~ 156 (513)
..|||||+|||+..+. ++++++. ..| |+...+|+ |+|||+|.|.+ ++-+++.++ ...+++++... .|
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le-~ry~~~~~F~~eiiVvddgs~d~T~~-~a~k~s~K~--~~d~irV~~l~-~n 142 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLE-KRYLSDKSFTYEIIVVDDGSTDSTVE-VALKFSRKL--GDDNIRVIKLK-KN 142 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHH-HHhccCCCCceeEEEeCCCCchhHHH-HHHHHHHHc--CcceEEEeehh-cc
Confidence 6999999999996555 4444443 233 33444444 55679999988 455566443 34678888555 45
Q ss_pred CCchhHHHHHhhhcc-----cccCCh------HHHHHHHHHHhhc-CCCeEEEeeeEEE-ecCCCcHHHH-HHHhh--hh
Q 040333 157 GYKAGALKEGLKRSY-----VKHCEY------PDYLRRAIPYLVQ-NSDIALVQARWRF-VNANECLLTR-MQEMS--LD 220 (513)
Q Consensus 157 g~Ka~aln~gl~~a~-----v~DaD~------pd~L~~lv~~~~~-~~~v~~V~~~~~~-~n~~~~~~~~-~~~~~--~~ 220 (513)
.||++|...|+.++. +.|||- -+.|++.+..... .++-++++|-..+ .|. +....+ +..-. +.
T Consensus 143 rgKGgAvR~g~l~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va~GsrahLe~~-~a~a~rs~~r~iLM~g 221 (323)
T KOG2977|consen 143 RGKGGAVRKGMLSSRGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVACGSRAHLENT-EAVAKRSVIRNILMYG 221 (323)
T ss_pred CCCCcceehhhHhccCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCceeecCHHHhhcc-HHHHHHhHhhHHHHHH
Confidence 569999999998884 358887 3456665554421 2333444444433 332 222222 11111 22
Q ss_pred hhhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCc-cchHHHHHHHHhCCCeEEEeccceecccCCcC
Q 040333 221 YHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT-VEDMDLAVRASLKGWKFVYLGDLQVKSELPST 294 (513)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~-~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 294 (513)
+|..+.--+.......- -.+-++.|++.+.+-.|.+-.. +-|.++-+.+.+-+..+.-.+ +-|+|.+.|
T Consensus 222 FH~lv~~~a~rsI~DTQ---cgfklftR~aa~~if~~lh~e~W~fdvEll~La~~~~ipi~ei~--v~w~EIdgS 291 (323)
T KOG2977|consen 222 FHKLVWIFAIRSIRDTQ---CGFKLFTRAAARRIFPWLHVERWAFDVELLYLAKRFTIPIKEIP--VEWTEIDGS 291 (323)
T ss_pred HHHHHHHHhcCcccccc---hhHHHhHHHHHHhhcchhheeeeeccHHHHHHHHHcCCCcEEee--eEEEEcCCc
Confidence 23222222222222221 2556788999888865544322 679999888888776665544 566777665
No 75
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.99 E-value=4.1e-10 Score=109.02 Aligned_cols=225 Identities=15% Similarity=0.071 Sum_probs=149.0
Q ss_pred CCCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 81 SNFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
.++|..||||.-+||+ ..+-+|+.|+++++-++.-.+|+ |+|.|.|++......+ -+++++++.+ +..|
T Consensus 121 ~dlp~TsviITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dped~~~L~r--------i~kvr~LRN~-~ReG 191 (559)
T KOG3738|consen 121 VDLPPTSVIITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPEDGKLLKR--------IPKVRVLRNN-EREG 191 (559)
T ss_pred cCCCCceEEEEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChHHHHHHhh--------hheeeeeccc-chhh
Confidence 4689999999999999 79999999999988665533443 5566999876544432 3578888444 4445
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHH-----HhhhhhhhhH
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQ-----EMSLDYHFKV 225 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~-----~~~~~~~~~~ 225 (513)
--...+.|.+.|. ++|+-+ .+||+-+++...+| ...+|++...+.|.+.--..... .+....+|..
T Consensus 192 LirSRvrGAdvA~a~vltFLDSHcEvN~~WLePLL~Rvaed-~trvVsPiiDvIn~dnf~Y~~asadLrGGFDWsLhF~W 270 (559)
T KOG3738|consen 192 LIRSRVRGADVAQATVLTFLDSHCEVNEGWLEPLLERVAED-TTRVVSPIIDVINLDNFSYVGASADLRGGFDWSLHFKW 270 (559)
T ss_pred hhhhhccccccccceEEEEEecceeecchhhHHHHHHHhhc-ccceeecccccccccccccccchhhhcCCcceEEEEEe
Confidence 6666777776663 456655 99999999998555 56678777777776531111100 0112223333
Q ss_pred HHHh----hhh-----ccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccceecc----
Q 040333 226 EQEV----GSA-----THAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQVKS---- 289 (513)
Q Consensus 226 ~~~~----~~~-----~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~---- 289 (513)
++.. .+. --....+.|+-.++.|+-|.++|.|+.+.- +|.+++++|+...|..+..+|-..+-+
T Consensus 271 e~~~~eqr~sr~~Pt~PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRk 350 (559)
T KOG3738|consen 271 EQMQLEQRESRADPTAPIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRK 350 (559)
T ss_pred hhcCHHHHhhccCCCCcccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhc
Confidence 3211 111 111233679999999999999999988642 899999999999999999988766532
Q ss_pred -----cCCcCHHHHHHHHHHhhhchhHHHHH
Q 040333 290 -----ELPSTFKAFRFQQHRWSCGPANLFRK 315 (513)
Q Consensus 290 -----~~p~t~~~~~~Qr~RW~~G~~~~~~~ 315 (513)
-.+.+-..|.+.-+|-+.-++.-++.
T Consensus 351 rHpy~FP~gs~~ty~~NTkr~AEvWmDEYK~ 381 (559)
T KOG3738|consen 351 RHPYTFPGGSGNTYIKNTKRAAEVWMDEYKN 381 (559)
T ss_pred cCCCcCCCCCCcchhhcchHHHHHHHHHHHH
Confidence 12333345666666655555554443
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=9.3e-09 Score=99.51 Aligned_cols=203 Identities=14% Similarity=0.079 Sum_probs=130.8
Q ss_pred CCCCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEE-EEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC
Q 040333 80 SSNFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVI-QVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTG 157 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I-~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g 157 (513)
++++|.+||+|.-+||. ..+.+|+.|++.-+-+..--+| .|+|+|+.+-+++-.+++...+ +--++++ |+++..
T Consensus 151 pe~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKehLkekLDeYv~~f---nGlVkV~-Rne~RE 226 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKEHLKEKLDEYVKLF---NGLVKVF-RNERRE 226 (603)
T ss_pred cccCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccHHHHHHHHHHHHHh---cCEEEEE-ecchhh
Confidence 47789999999999999 8999999999976655543333 3556688777776666666654 3345666 555555
Q ss_pred CchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCC----------Cc-HHHHHHHhh
Q 040333 158 YKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNAN----------EC-LLTRMQEMS 218 (513)
Q Consensus 158 ~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~----------~~-~~~~~~~~~ 218 (513)
|--.|...|.+.|. .+||-+ .+||.-++++...|..+ +...-....+.+ .+ ....+-+..
T Consensus 227 GLI~aRSiGA~~atGeV~ifLDAHCEVntNWlpPLlAPI~rdRtv-mTVP~IDgId~n~~EyrpvyG~dn~h~rGifeWg 305 (603)
T KOG3737|consen 227 GLIQARSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAPISRDRTV-MTVPLIDGIDGNTYEYRPVYGGDNDHARGIFEWG 305 (603)
T ss_pred hhhhhhccchhhccccEEEEEecceeeecccccccccccccCceE-EEEeeeeeecCCceEEeeccCCcchhhcchhhhh
Confidence 57777777777774 357776 89999999998555332 222222222211 11 111111111
Q ss_pred --hhhhh--hHHHHhh---hhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEecccee
Q 040333 219 --LDYHF--KVEQEVG---SATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQV 287 (513)
Q Consensus 219 --~~~~~--~~~~~~~---~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~ 287 (513)
+.... ..++..+ +.-.....-.|..+++.|+.+.++|.+++... +|.+++++.+...|-++.++|-..+
T Consensus 306 mLyKe~~~t~rE~r~RkhnsePyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSrV 384 (603)
T KOG3737|consen 306 MLYKEVPLTPREKRLRKHNSEPYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSRV 384 (603)
T ss_pred heeccCCCCHHHHHhhhccCCCCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEcccc
Confidence 11100 1111111 11112223468889999999999999998754 8999999999999999999997654
No 77
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.73 E-value=6.3e-09 Score=108.53 Aligned_cols=210 Identities=16% Similarity=0.161 Sum_probs=139.0
Q ss_pred CCCCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCc-HHHHHHHHHHHHHHhhcCCcEEEEEecCCCC
Q 040333 80 SSNFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTD-PAIKQMVEQECQRWAAKGINIRYQIRENRTG 157 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD-~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g 157 (513)
.+.+|.+||||+.+||+ .++-+++.|+.+.+-+..-.+|+++||++| +......+.+.+++ ..+++++.+++.
T Consensus 138 ~~~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~l~~~Ld~y~k~~----~~v~i~r~~~R~- 212 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDHLKDKLEEYVKRF----SKVRILRTKKRE- 212 (578)
T ss_pred ccccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhhhhhhhHHHHhhh----cceeEEeecchh-
Confidence 45689999999999999 799999999998775554445556666444 44344455444443 337888665554
Q ss_pred CchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHH---H--Hhhhhhhhh
Q 040333 158 YKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRM---Q--EMSLDYHFK 224 (513)
Q Consensus 158 ~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~---~--~~~~~~~~~ 224 (513)
|+..|+..|...|. ++|+-. ..||+-+++...+| ...+|+......+.+.-..... . .+.....|.
T Consensus 213 GLIrARl~GA~~A~geVL~FLDsHcE~n~gWLePLL~~I~~~-r~tvv~PvID~Id~~tf~y~~~~~~~rGgFdW~l~f~ 291 (578)
T KOG3736|consen 213 GLIRARLLGASMATGEVLTFLDSHCEVNVGWLEPLLARIAED-RKTVVCPVIDVIDDNTFEYEKQSELMRGGFDWELTFK 291 (578)
T ss_pred hhHHHHhhhhhhhhchheeeeecceeEecCcchHHHHHhhhc-CceeecceEEeecCcCceecccCccceeeeecceeEE
Confidence 48889998888875 345555 89999999998444 6667777776666432111110 0 000111111
Q ss_pred ------HHHHhh-h--hccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccceecc---
Q 040333 225 ------VEQEVG-S--ATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQVKS--- 289 (513)
Q Consensus 225 ------~~~~~~-~--~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~--- 289 (513)
.....+ . .--....+.|+.++++|+.|.++|+||+..- +|-.++++|+..-|.++..+|-..|-+
T Consensus 292 w~~lP~~~~~~~~~~t~PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHifR 371 (578)
T KOG3736|consen 292 WERLPLPEEKRRELPTDPIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIFR 371 (578)
T ss_pred eccCCccHhhcccCCCCCcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeeee
Confidence 011111 0 1111234679999999999999999998743 899999999999999999999777654
Q ss_pred -cCCcCH
Q 040333 290 -ELPSTF 295 (513)
Q Consensus 290 -~~p~t~ 295 (513)
..|.++
T Consensus 372 k~~pY~~ 378 (578)
T KOG3736|consen 372 KRKPYTF 378 (578)
T ss_pred cCCCccC
Confidence 345555
No 78
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.47 E-value=2.3e-06 Score=84.88 Aligned_cols=164 Identities=13% Similarity=0.124 Sum_probs=95.4
Q ss_pred EEEEEecCCChHHHHHHHHHHHcCC--CCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCc----
Q 040333 86 VLIQIPMFNEKEVYKISIGAACGLS--WPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYK---- 159 (513)
Q Consensus 86 VsIiIP~yNE~~~l~~~l~sl~~q~--yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~K---- 159 (513)
+.|+|++||.++.++++|+|+++|. +.+.+++| ..|++++++.+ .++. + ..+++++...+....+
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liI-s~DG~~~~~~~-~v~~----~---~~~i~~i~~~~~~~~~~~~~ 72 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIV-SQDGGYEEVAD-VAKS----F---GDGVTHIQHPPISIKNVNPP 72 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEE-EeCCCchHHHH-HHHh----h---ccccEEEEcccccccccCcc
Confidence 4699999999999999999999984 33334333 44556555544 3332 1 1245555332111001
Q ss_pred ---------hh----HHHHHhhhc---c--cccCCh---HH---HHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHH
Q 040333 160 ---------AG----ALKEGLKRS---Y--VKHCEY---PD---YLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQ 215 (513)
Q Consensus 160 ---------a~----aln~gl~~a---~--v~DaD~---pd---~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~ 215 (513)
+. |+|.+++.. + +++.|. || +++++++.+++|+.+.+|++.-. |........
T Consensus 73 ~~~~~y~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~Nd--nG~~~~~~~-- 148 (334)
T cd02514 73 HKFQGYYRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWND--NGKEHFVDD-- 148 (334)
T ss_pred cccchhhHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeecc--CCcccccCC--
Confidence 22 777777653 1 466666 98 55777888888999999998642 211000000
Q ss_pred HhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHH--HhCCCe
Q 040333 216 EMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRA--SLKGWK 278 (513)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl--~~~G~k 278 (513)
........-.++|.+-+.+|+++++.. +.-..-|.|..+|. +++|-.
T Consensus 149 -------------~~~~lyrs~ff~glGWml~r~~W~e~~---~~wp~~~WD~w~R~~~~rkgr~ 197 (334)
T cd02514 149 -------------TPSLLYRTDFFPGLGWMLTRKLWKELE---PKWPKAFWDDWMRLPEQRKGRE 197 (334)
T ss_pred -------------CcceEEEecCCCchHHHHHHHHHHHhC---CCCCCCChHHhhcchhhhcCCc
Confidence 000111111245777788888888872 22222499999986 456633
No 79
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=98.26 E-value=2e-06 Score=80.88 Aligned_cols=172 Identities=14% Similarity=0.176 Sum_probs=86.5
Q ss_pred EEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHH
Q 040333 87 LIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEG 166 (513)
Q Consensus 87 sIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~g 166 (513)
|| |.|+|.++..++|++++.++..|+.+.+- + |+ ..+. .+-+.+.|.|
T Consensus 2 si-I~c~n~~~~~~~~~~~i~~~~~~~~~~i~-i-~~----------------------------~~~~-~s~~~~yN~a 49 (217)
T PF13712_consen 2 SI-IICVNDEELYEECLRSIKRLIGPPGELIE-I-DN----------------------------VRNA-KSMAAAYNEA 49 (217)
T ss_dssp EE-EEEES-HHHHHHHHHHHHHTT--TEEEEE-E-E-----------------------------SSS--S-TTTHHHHH
T ss_pred EE-EEEECCHHHHHHHHHHHHhhCCCCceEEE-E-ec----------------------------cCCC-cCHHHHHHHH
Confidence 44 55667777788899999999888654322 2 21 1111 3367789999
Q ss_pred hhhcc-----cccCCh----HHHHHHHHHHhhcCCCeEEEe--eeEEEecCCCcHHHHHHH----hhhhhh---hhH---
Q 040333 167 LKRSY-----VKHCEY----PDYLRRAIPYLVQNSDIALVQ--ARWRFVNANECLLTRMQE----MSLDYH---FKV--- 225 (513)
Q Consensus 167 l~~a~-----v~DaD~----pd~L~~lv~~~~~~~~v~~V~--~~~~~~n~~~~~~~~~~~----~~~~~~---~~~--- 225 (513)
++.|. .++-|. ++|+.++++.|.++|++|+++ |... ...+..++..... ..+... ...
T Consensus 50 ~~~a~~~ylvflHqDv~i~~~~~l~~il~~~~~~~~~G~iGvaG~~~-~~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~ 128 (217)
T PF13712_consen 50 MEKAKAKYLVFLHQDVFIINENWLEDILEIFEEDPNIGMIGVAGSKR-LPPNGVWWESPNKVGKVREYGRIMHGHGPNSA 128 (217)
T ss_dssp GGG--SSEEEEEETTEE-SSHHHHHHHHHHHHH-TTEEEEESEEEES-S-S-TTS---EEEEEETTEEEE----E-----
T ss_pred HHhCCCCEEEEEeCCeEEcchhHHHHHHHHHhhCCCccEEEeecCCc-CCCCCccccccccccccccccccccccccccc
Confidence 99983 234444 899999999998899987765 2221 1212222221100 000000 000
Q ss_pred HHH-h----hhhccCcccccccchHhhHHHHHHhCCcCCCCc----cchHHHHHHHHhCCCeEEEeccceecccCCcCHH
Q 040333 226 EQE-V----GSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT----VEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFK 296 (513)
Q Consensus 226 ~~~-~----~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~----~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~ 296 (513)
... . ......+-.+-|..++.+|+.+ +|+++.+ .-|.|+++++.++|+++ +++++.+.+....++.
T Consensus 129 ~~~~~~~~~~~~~~~V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v-~~~~~~~~H~s~g~~~ 203 (217)
T PF13712_consen 129 GEVRYGGPRNDPPEEVQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRV-VVPPPWCIHFSGGSFD 203 (217)
T ss_dssp --------ES-SSEEEEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EE-EE-----EE-S----S
T ss_pred ccccccccccCCceeEEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEE-EecCceEEEcCCCCcc
Confidence 000 0 0112223336699999999998 7888733 57999999999999998 6677888887776654
No 80
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=97.62 E-value=0.00014 Score=67.45 Aligned_cols=49 Identities=18% Similarity=0.119 Sum_probs=42.6
Q ss_pred ccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEecccee
Q 040333 239 FNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQV 287 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~ 287 (513)
+.|++++++|+.+.+++||++... .||.|+..|+..+|.++...+....
T Consensus 111 ~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~ 162 (219)
T cd00899 111 YFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTG 162 (219)
T ss_pred ccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCccc
Confidence 458899999999999999998754 7999999999999999887775554
No 81
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=96.88 E-value=0.00057 Score=52.82 Aligned_cols=48 Identities=25% Similarity=0.194 Sum_probs=34.6
Q ss_pred ccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccce
Q 040333 239 FNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQ 286 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~ 286 (513)
+.|++++++|+.++++|||++... .||.|+..|+..+|.++...+...
T Consensus 19 ~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~ 69 (78)
T PF02709_consen 19 FFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSI 69 (78)
T ss_dssp ---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTT
T ss_pred eeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCce
Confidence 568999999999999999998755 699999999999999887655443
No 82
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=96.69 E-value=0.0092 Score=57.13 Aligned_cols=106 Identities=19% Similarity=0.278 Sum_probs=70.8
Q ss_pred CCCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEE-EEEcCCC--cHHHHHHHHHHHHHHhh------cCCcEEEE
Q 040333 80 SSNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVI-QVLDDST--DPAIKQMVEQECQRWAA------KGINIRYQ 150 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I-~V~Ddst--D~t~~~l~~~~~~~~~~------~~~~i~~i 150 (513)
..+-+.|-|+.|..|-+..+.+-.+.+.+++||+..+.+ +++.+++ |.+.+.+ ++..++.+. ....|+++
T Consensus 21 ~~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l-~~~~~~~q~~~~~~~~F~~itIl 99 (269)
T PF03452_consen 21 ARNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKIL-EAALKKLQSHGPESKRFRSITIL 99 (269)
T ss_pred cccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHH-HHHHHHHhccCcccCCcceEEEE
Confidence 355689999999999999999999999999999988877 5667777 7776644 433333332 22345555
Q ss_pred Eec----------CCCCC---------chhHHHHHhhhc------c--cccCCh----HHHHHHHHH
Q 040333 151 IRE----------NRTGY---------KAGALKEGLKRS------Y--VKHCEY----PDYLRRAIP 186 (513)
Q Consensus 151 ~~~----------~~~g~---------Ka~aln~gl~~a------~--v~DaD~----pd~L~~lv~ 186 (513)
+.+ +|... -|.|+|..+..+ . .+|+|. |+.++.+++
T Consensus 100 ~~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~ 166 (269)
T PF03452_consen 100 RKDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIA 166 (269)
T ss_pred cCCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHh
Confidence 432 11111 133445544443 1 369999 788888866
No 83
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=96.40 E-value=0.14 Score=48.11 Aligned_cols=185 Identities=15% Similarity=0.112 Sum_probs=94.2
Q ss_pred CeEEEEEecCCChH---HHHHHHH--HHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 84 PVVLIQIPMFNEKE---VYKISIG--AACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 84 P~VsIiIP~yNE~~---~l~~~l~--sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
|+.+++||+--.++ .-.+... ++++---|++...|+++|+++-- .+...++-+..+++.|+....++..
T Consensus 2 ~~~~~iiPv~~S~e~p~~~~R~f~~~~~~k~fts~~~~~vi~~~~~~~~------d~~i~~~i~~~~~~~yl~~~s~~~F 75 (346)
T COG4092 2 QPNGEIIPVAESEELPLTDSRQFSRTSAVKVFTSSDITMVICLRAHEVM------DRLIRSYIDPMPRVLYLDFGSPEPF 75 (346)
T ss_pred CCcceEeecchhhccchhHHHHHhhHhhhhhccccccEEEEEEecchhH------HHHHHHHhccccceEEEecCCCccc
Confidence 56788888876442 2223333 22322235566777788885411 1222234455678778765443332
Q ss_pred --chhHHHHHhhhcc---------cccCCh---HHHHHHHH-----HHhhcCCCeEEEeeeEEEecCCCcHHHH-HHHhh
Q 040333 159 --KAGALKEGLKRSY---------VKHCEY---PDYLRRAI-----PYLVQNSDIALVQARWRFVNANECLLTR-MQEMS 218 (513)
Q Consensus 159 --Ka~aln~gl~~a~---------v~DaD~---pd~L~~lv-----~~~~~~~~v~~V~~~~~~~n~~~~~~~~-~~~~~ 218 (513)
-+...|.|...+. .+|+|+ .|-..+++ ..+.++-+ +..--++.+.|...+..-. ...+.
T Consensus 76 ~s~~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~S~dnF~k~l~~~~ikk~~tnI~-a~~vlPV~~LNk~~~~v~f~~~d~f 154 (346)
T COG4092 76 ASETICANNGADYSHEKCESNLVLFLDVDCFGSSDNFAKMLSIATIKKMRTNID-APLVLPVYHLNKADTQVFFDVEDMF 154 (346)
T ss_pred cchhhhhhccchhhhccccccEEEEEeccccccHHHHHHHHHHHHHHHHHhccC-cceeeeeeecchhhhhHHHHHHHHh
Confidence 1334456665552 368888 33333333 33322222 3333455677764432111 11111
Q ss_pred hhhhhhHHH--HhhhhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhC
Q 040333 219 LDYHFKVEQ--EVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLK 275 (513)
Q Consensus 219 ~~~~~~~~~--~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~ 275 (513)
.+....... ..+....-+.....+..++.|..+...||++++.. +||.|+-.|+...
T Consensus 155 ~d~~i~es~~~~~~~~~~ff~~~~T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~ 216 (346)
T COG4092 155 LDAMIFESPLAEFRKEDNFFIAPYTNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY 216 (346)
T ss_pred hhhHhhhhHHHHhCcccccccccccceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH
Confidence 111100000 01111111222334567899999999999999754 8999999998753
No 84
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=96.40 E-value=0.033 Score=54.64 Aligned_cols=191 Identities=16% Similarity=0.163 Sum_probs=107.8
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCch
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKA 160 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka 160 (513)
-+.|.+.+++|..++.....+...++|...-.+.++.|....-|.|+..+ ++....++.+..++..+... ..-..+
T Consensus 226 i~~pgih~i~pl~gr~~~f~rf~q~~c~~~d~~l~l~vv~f~~se~e~ak---~e~~tslra~f~~~q~l~ln-geFSRa 301 (494)
T KOG3588|consen 226 IEDPGIHMIMPLRGRAAIFARFAQSICARGDDRLALSVVYFGYSEDEMAK---RETITSLRASFIPVQFLGLN-GEFSRA 301 (494)
T ss_pred ccCCCceEEEeccchHHHhhhhhHHHhccCCCceEEEEEEecCCChHHHh---hhHHHHHhhcCCceEEeccc-chhhhh
Confidence 35688999999999999999999999875434444444222335555433 23445566667777666332 222467
Q ss_pred hHHHHHhhhcc----cc--cCCh---HHHHHHHHHHhhcCCCeEEEeeeEE-EecC-----CCcHHHHHHHhhhhhhhhH
Q 040333 161 GALKEGLKRSY----VK--HCEY---PDYLRRAIPYLVQNSDIALVQARWR-FVNA-----NECLLTRMQEMSLDYHFKV 225 (513)
Q Consensus 161 ~aln~gl~~a~----v~--DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~-~~n~-----~~~~~~~~~~~~~~~~~~~ 225 (513)
-||..|.+.-. ++ |.|. .++|.++-.-- .|+.-+-.+..- -.|+ .+......+.. ..
T Consensus 302 ~aL~vGAe~~~~nvLLFfcDVDi~FT~efL~rcr~Nt--~~gkqiyfPivFS~ynp~ivy~~~~~~p~e~~~------~~ 373 (494)
T KOG3588|consen 302 KALMVGAETLNANVLLFFCDVDIYFTTEFLNRCRLNT--ILGKQIYFPIVFSQYNPEIVYEQDKPLPAEQQL------VI 373 (494)
T ss_pred HHHHhhHHHhccceeEEEeccceeehHHHHHHHhhcc--CCCceEEEEEEEeecCcceeecCCCCCchhHhe------ee
Confidence 78888876652 23 5555 88888764322 232221111110 0111 11111111111 00
Q ss_pred HHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEecccee
Q 040333 226 EQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQV 287 (513)
Q Consensus 226 ~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~ 287 (513)
.+. .....-+++ |-.+.+| +-+.++||||.+.. .||.+|-....+.|.+++-.|++-.
T Consensus 374 ~~~--tGfwRdfGf-Gmtc~yr-sd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl 434 (494)
T KOG3588|consen 374 KKD--TGFWRDFGF-GMTCQYR-SDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGL 434 (494)
T ss_pred ccc--cccccccCC-ceeEEee-ccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCce
Confidence 000 011111111 4444444 45788999987533 8999999999999999998887653
No 85
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=96.35 E-value=0.29 Score=48.36 Aligned_cols=182 Identities=14% Similarity=0.161 Sum_probs=92.8
Q ss_pred CCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCc---HHHH---HHHHHHHHHHhhcCCcEEEEEec--
Q 040333 83 FPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTD---PAIK---QMVEQECQRWAAKGINIRYQIRE-- 153 (513)
Q Consensus 83 ~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD---~t~~---~l~~~~~~~~~~~~~~i~~i~~~-- 153 (513)
.....|+|||.||. ..++..|.++ |.+..+| |+.+|+. +-.+ ++++.+|+. ....+-.+|..
T Consensus 50 ~~~mAIVVP~KdE~l~lleGVL~gI-----Ph~c~iI-vVSNS~r~~~d~f~~E~dlv~~f~~~---t~r~~i~vHQkDp 120 (393)
T PRK14503 50 LGRMAIVVPVKNERLKLLEGVLKGI-----PHECPII-VVSNSKREPPDRFKLEVDLVRHFYRL---TQRPIIIVHQKDP 120 (393)
T ss_pred HhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCCchHHHHHHHHHHHHHhh---hcCceEEEEcCCH
Confidence 34689999999999 6666666555 7666666 6666543 1111 133333331 12233444331
Q ss_pred ------------------C-CCCCchhHHHHHhhhcc--------cccCCh--HHHHHHHHHHh-----hcCCCeEEEee
Q 040333 154 ------------------N-RTGYKAGALKEGLKRSY--------VKHCEY--PDYLRRAIPYL-----VQNSDIALVQA 199 (513)
Q Consensus 154 ------------------~-~~g~Ka~aln~gl~~a~--------v~DaD~--pd~L~~lv~~~-----~~~~~v~~V~~ 199 (513)
. -..||+.++-.|+-.|+ +.|||. |....+.+..+ .+.....+|--
T Consensus 121 ~la~Af~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPGaV~EYvk~yAAGf~ma~spytMVRi 200 (393)
T PRK14503 121 GLAEALKEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIPGAVNEYVKIYAAGFLMAESPYTMVRI 200 (393)
T ss_pred HHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCCchHHHHHHHHHhhhcccCCCCceEEE
Confidence 1 11268888888877663 479999 66666655543 12233455555
Q ss_pred eEEEecC---------CCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHH
Q 040333 200 RWRFVNA---------NECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAV 270 (513)
Q Consensus 200 ~~~~~n~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~ 270 (513)
.|.+... ...-.+...+..++.++... .+....-...-|++=-+.+++..+.+ .|...+-.|=..+..
T Consensus 201 ~W~~KPKv~~~~lyF~k~GRvSel~nr~LN~l~~~~--~gf~t~li~TGNAGEhAmt~~La~~l-~f~tGY~VEp~~lvd 277 (393)
T PRK14503 201 HWRYKPKVTEDRLYFRKWGRVSEITNRYLNQLISEY--TGFETDIIKTGNAGEHAMTMKLAEIM-PFSTGYSIEPYEIVY 277 (393)
T ss_pred EecCCCceecCeEEEecCcchhHHHHHHHHHHHhhh--ccccccceecCCchhhHhhHHHHHhC-CCCCCccccHHHHHH
Confidence 5543321 01112222221112111110 00000000111344457888888877 566666667777666
Q ss_pred HHHhCC
Q 040333 271 RASLKG 276 (513)
Q Consensus 271 rl~~~G 276 (513)
.+.+.|
T Consensus 278 lle~~G 283 (393)
T PRK14503 278 LLEEYG 283 (393)
T ss_pred HHHHhC
Confidence 666655
No 86
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=96.34 E-value=0.25 Score=48.43 Aligned_cols=181 Identities=13% Similarity=0.149 Sum_probs=94.6
Q ss_pred CCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCc---HHHH---HHHHHHHHHHhhcCCcEEEEEec--
Q 040333 83 FPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTD---PAIK---QMVEQECQRWAAKGINIRYQIRE-- 153 (513)
Q Consensus 83 ~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD---~t~~---~l~~~~~~~~~~~~~~i~~i~~~-- 153 (513)
.....|+|||.||. ..++..|.++ |.+..+| |+.+|+. +-.+ ++++.+|+. .+..+-.+|..
T Consensus 49 ~~~maIVVP~KdE~l~lleGVL~gI-----Ph~c~iI-vVSNS~r~~~d~f~~E~d~~~~f~~~---t~r~~i~vHQkDp 119 (381)
T TIGR02460 49 LGKTAIVVPVKNEKLHLLEGVLSGI-----PHECPII-IVSNSKREPPDRFKMEVDLIRHFSNL---THRKIIIIHQKDP 119 (381)
T ss_pred HhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCChhHHHHHHHHHHHHHHh---hcCceEEEEcCCH
Confidence 34689999999999 6666666554 7666666 5555543 1111 123333331 12334444331
Q ss_pred ------------------C-CCCCchhHHHHHhhhcc--------cccCCh--HHHHHHHHHHhh-----cCCCeEEEee
Q 040333 154 ------------------N-RTGYKAGALKEGLKRSY--------VKHCEY--PDYLRRAIPYLV-----QNSDIALVQA 199 (513)
Q Consensus 154 ------------------~-~~g~Ka~aln~gl~~a~--------v~DaD~--pd~L~~lv~~~~-----~~~~v~~V~~ 199 (513)
. -..||+.++-.|+-.|+ +.|||. |....+.+..+. +.....+|--
T Consensus 120 ~la~Af~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPGaV~EYvk~yAaGf~ma~spy~MVRi 199 (381)
T TIGR02460 120 ALAEAFKEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFPGAVNEYVKIYAAGFLMATSPYSMVRI 199 (381)
T ss_pred HHHHHHHHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCCchHHHHHHHHHhhhcccCCCCeeEEE
Confidence 1 12268888888877663 479999 666665555431 2223455555
Q ss_pred eEEEecC---------CCcHHHHHHHhhhhhhhhHHHHhhhhccCcc--cccccchHhhHHHHHHhCCcCCCCccchHHH
Q 040333 200 RWRFVNA---------NECLLTRMQEMSLDYHFKVEQEVGSATHAFF--GFNGTAGVWRIAAINEAGGWKDRTTVEDMDL 268 (513)
Q Consensus 200 ~~~~~n~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l 268 (513)
.|.+... ...-.++..+..++.++.. ........ .-+++=-+.+++..+.+ .|...+-.|=..+
T Consensus 200 ~W~~KPKv~~~~lyF~~~GRVSElvnr~LN~l~~~----~~gfet~ii~TGnAGEhAmt~~La~~l-~f~tGYaVEp~~l 274 (381)
T TIGR02460 200 HWRYKPKLTKGTLYFRKWGRVSEITNHYLNLLISE----HTGFETDIIKTGNAGEHALTMKLAEIL-PFSSGYSVEPYEL 274 (381)
T ss_pred EecCCCceecCeEEEcCCCchhHHHHHHHHHHHHh----hccccCcceecccchhhhhhHHHHhhC-CCCCCccccHHHH
Confidence 5543321 0112222222212221111 01111110 01344567889988887 5666666777777
Q ss_pred HHHHHhCCC
Q 040333 269 AVRASLKGW 277 (513)
Q Consensus 269 ~~rl~~~G~ 277 (513)
...+.+.|.
T Consensus 275 vdlle~~G~ 283 (381)
T TIGR02460 275 VYILERFGG 283 (381)
T ss_pred HHHHHHhcC
Confidence 777776663
No 87
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=96.23 E-value=0.046 Score=53.78 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=59.4
Q ss_pred CeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCC----cHH--HHHHHHHHHHHHhhcCCcEEEEEec---
Q 040333 84 PVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDST----DPA--IKQMVEQECQRWAAKGINIRYQIRE--- 153 (513)
Q Consensus 84 P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~Ddst----D~t--~~~l~~~~~~~~~~~~~~i~~i~~~--- 153 (513)
...+|+|||.||+ ..++..|.++ |.+-.+| |+.+|+ |.- -.++++.+|.. ....+-++|..
T Consensus 50 ~~maIVVP~KnE~l~lleGVL~gI-----Ph~C~II-vVSNS~r~~~d~f~~E~d~l~~f~~~---t~r~~~~vHQkDp~ 120 (381)
T PF09488_consen 50 SKMAIVVPCKNEKLKLLEGVLSGI-----PHDCLII-VVSNSSREPVDRFKMEVDLLKHFCRL---TRRQIIIVHQKDPG 120 (381)
T ss_dssp TTEEEEEEESS--HHHHHHHHHCS------TTSEEE-EEE---CSSSCHHHHHHHHHHHHHHH---CT--EEEEETT-HH
T ss_pred hCcEEEEECCCCchhhhhhhhhcC-----CCCCeEE-EEECCCCCCccHHHHHHHHHHHHHHh---hcCceEEEecCCHH
Confidence 4689999999999 6777776655 7776666 555544 321 11233444432 12345555542
Q ss_pred --------------C----CCCCchhHHHHHhhhcc--------cccCCh--HHHHHHHHHHh-----hcCCCeEEEeee
Q 040333 154 --------------N----RTGYKAGALKEGLKRSY--------VKHCEY--PDYLRRAIPYL-----VQNSDIALVQAR 200 (513)
Q Consensus 154 --------------~----~~g~Ka~aln~gl~~a~--------v~DaD~--pd~L~~lv~~~-----~~~~~v~~V~~~ 200 (513)
+ -..||+.++-.|+-.|+ +.|||. |....+.+..+ .++....+|--.
T Consensus 121 lA~Af~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiPGaV~EYvk~yAAGf~ms~spytMVRi~ 200 (381)
T PF09488_consen 121 LAEAFKEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIPGAVNEYVKDYAAGFAMSESPYTMVRIH 200 (381)
T ss_dssp HHHHHHHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-HHHHHHHHHHHHHHHHC-SSSCEEEEEE
T ss_pred HHHHHHHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCcchHHHHHHHHHhhhcccCCCceEEEEE
Confidence 1 12268888888887764 479999 76666655443 245667888888
Q ss_pred EEEec
Q 040333 201 WRFVN 205 (513)
Q Consensus 201 ~~~~n 205 (513)
|.+..
T Consensus 201 W~~KP 205 (381)
T PF09488_consen 201 WRSKP 205 (381)
T ss_dssp -----
T ss_pred ecCCC
Confidence 87654
No 88
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=95.99 E-value=0.051 Score=55.69 Aligned_cols=175 Identities=16% Similarity=0.198 Sum_probs=79.3
Q ss_pred CCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecC------C
Q 040333 82 NFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIREN------R 155 (513)
Q Consensus 82 ~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~------~ 155 (513)
..|.+-|+|-+||.++.+.+||++|++..-...+..|+|..|+.++.....++. + +..+++++... .
T Consensus 91 ~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi~~----y---~~~v~~i~~~~~~~i~~~ 163 (434)
T PF03071_consen 91 KEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVIKS----Y---GDQVTYIQHPDFSPITIP 163 (434)
T ss_dssp ------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHHHG----G---GGGSEEEE-S--S-----
T ss_pred CCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHHHH----h---hhhheeeecCCcCCceeC
Confidence 456788999999999999999999997552234555667777666654544442 3 22344443221 1
Q ss_pred CCC-chh-----H--HHHHhhhcc---------cccCCh---HHHHHH---HHHHhhcCCCeEEEeeeEEEecCCCcHHH
Q 040333 156 TGY-KAG-----A--LKEGLKRSY---------VKHCEY---PDYLRR---AIPYLVQNSDIALVQARWRFVNANECLLT 212 (513)
Q Consensus 156 ~g~-Ka~-----a--ln~gl~~a~---------v~DaD~---pd~L~~---lv~~~~~~~~v~~V~~~~~~~n~~~~~~~ 212 (513)
++. |.. | ...|+.... |+..|. ||+++. +.+.+.+||.+-+|++- |.++. ..
T Consensus 164 ~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSaw----NdnG~-~~ 238 (434)
T PF03071_consen 164 PKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAW----NDNGK-EH 238 (434)
T ss_dssp TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES------TT-B-GG
T ss_pred cccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEcc----ccCCc-cc
Confidence 111 111 1 111222221 344444 887765 45566779999998764 22211 00
Q ss_pred HHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCC-cCCCCccchHHHHHHHHhCCCeEEE
Q 040333 213 RMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGG-WKDRTTVEDMDLAVRASLKGWKFVY 281 (513)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg-~~~~~~~ED~~l~~rl~~~G~ki~~ 281 (513)
.. ...........-.++|-+-+++|+..+++.. |+.. . =|..+-....++|-.++.
T Consensus 239 ~~-----------~~~~~~~lyRsdffpglGWml~r~~w~el~~~Wp~~-~-WDdwmR~~~~rkgR~cIr 295 (434)
T PF03071_consen 239 FV-----------DDSRPSLLYRSDFFPGLGWMLTRELWDELEPKWPKA-F-WDDWMRQPEQRKGRQCIR 295 (434)
T ss_dssp GS------------TT-TT-EEEESS---SSEEEEHHHHHHHGGG--SS---HHHHHTSHHHHTT-EEEE
T ss_pred cc-----------cCCCccceEecccCCchHHHhhHHHHHhhcccCCCC-C-chhhhcCccccCCCceee
Confidence 00 0000111111112568888999999998754 6543 2 233333445677765544
No 89
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=93.44 E-value=1.3 Score=47.11 Aligned_cols=189 Identities=17% Similarity=0.180 Sum_probs=96.4
Q ss_pred CCeEEEEEecCCC-hHHHHHHHHHHHcC---CCCCCceEEEEEcCC-CcHH----HHHHHHHHHHHHhhcCCcEEEEEec
Q 040333 83 FPVVLIQIPMFNE-KEVYKISIGAACGL---SWPSDRLVIQVLDDS-TDPA----IKQMVEQECQRWAAKGINIRYQIRE 153 (513)
Q Consensus 83 ~P~VsIiIP~yNE-~~~l~~~l~sl~~q---~yp~~~~~I~V~Dds-tD~t----~~~l~~~~~~~~~~~~~~i~~i~~~ 153 (513)
-..|.||||+.+. .+.+.+-++...+. +-.+..+.| |...+ +|.. ++..++++.+++ ...++.++...
T Consensus 246 ~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~v-V~~~~~~~~~~~~~ik~~l~~l~~k~--~~~~i~~i~~~ 322 (499)
T PF05679_consen 246 STRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTV-VLFYDPSDSDSISQIKELLEELERKY--PFSRIKWISVK 322 (499)
T ss_pred CCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEE-EEecCcccchhHHHHHHHHHHHHHhC--CccceEEEEec
Confidence 4789999999999 67777666655432 212233333 44432 3322 122333333333 24567777655
Q ss_pred CCCCCchhHHHHHhhhcc----c--ccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEE--ecCCCcHHHHHHHhhhhhh
Q 040333 154 NRTGYKAGALKEGLKRSY----V--KHCEY---PDYLRRAIPYLVQNSDIALVQARWRF--VNANECLLTRMQEMSLDYH 222 (513)
Q Consensus 154 ~~~g~Ka~aln~gl~~a~----v--~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~--~n~~~~~~~~~~~~~~~~~ 222 (513)
...-.++.+++.|++... + .|.|. +|+|.++-..-..... |.-+..+ .|++... ... -.....
T Consensus 323 ~~~fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR~nti~g~q---vy~PI~Fs~y~p~~~~-~~~--~~~~~~ 396 (499)
T PF05679_consen 323 TGEFSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCRMNTIPGKQ---VYFPIVFSQYNPDIVY-AGK--PPEPDQ 396 (499)
T ss_pred CCCccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHHHhhhcCcE---EEEeeeccccCCcccc-cCC--CCcccc
Confidence 344458889999988653 2 35555 9999887544312211 2222222 1221100 000 000000
Q ss_pred hhHHHHhhhhccCccc-c-cccchHhhHHHHHHh--CCcCCC---CccchHHHHHHHHhCC--CeEEEeccce
Q 040333 223 FKVEQEVGSATHAFFG-F-NGTAGVWRIAAINEA--GGWKDR---TTVEDMDLAVRASLKG--WKFVYLGDLQ 286 (513)
Q Consensus 223 ~~~~~~~~~~~~~~~~-~-~G~~~~~Rr~~l~~~--Gg~~~~---~~~ED~~l~~rl~~~G--~ki~~~~~~~ 286 (513)
+.... ..+++- + -|-.++++.+ +.++ ||++.. ...||.||.-+..+.| .++.=.+++-
T Consensus 397 ~~i~~-----~~G~w~~~gfg~~~~YksD-y~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~ 463 (499)
T PF05679_consen 397 FDISK-----DTGFWRRFGFGMVCFYKSD-YMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPG 463 (499)
T ss_pred CccCC-----CCCccccCCCceEEEEhhh-hhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCC
Confidence 00000 001111 1 1455556655 5666 666654 2389999999999999 7776666654
No 90
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=93.30 E-value=0.32 Score=39.04 Aligned_cols=38 Identities=21% Similarity=0.114 Sum_probs=29.6
Q ss_pred CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHH
Q 040333 93 FNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMV 133 (513)
Q Consensus 93 yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~ 133 (513)
+||+..|++.|..-+++... ++.| ++|+|+|+|.+.+.
T Consensus 1 rne~~~L~~wl~~~~~lG~d--~i~i-~d~~s~D~t~~~l~ 38 (97)
T PF13704_consen 1 RNEADYLPEWLAHHLALGVD--HIYI-YDDGSTDGTREILR 38 (97)
T ss_pred CChHHHHHHHHHHHHHcCCC--EEEE-EECCCCccHHHHHH
Confidence 69999999999999877553 3444 77889999987543
No 91
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=92.80 E-value=0.41 Score=46.90 Aligned_cols=76 Identities=21% Similarity=0.241 Sum_probs=51.9
Q ss_pred ccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEE-Eeccceec----c-----c-CCcCHHHHHHHHHH
Q 040333 239 FNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFV-YLGDLQVK----S-----E-LPSTFKAFRFQQHR 304 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~-~~~~~~~~----~-----~-~p~t~~~~~~Qr~R 304 (513)
+-|+-.++.++-++++.||+...- +||-|+..|++.+|+++- +.++.--+ + + -|.-++-+.+-+.|
T Consensus 260 ~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~n~~Ry~lL~~tk~r 339 (372)
T KOG3916|consen 260 YFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEPNPGRYKLLRNTKER 339 (372)
T ss_pred hhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCCChHHHHHHHhhhhh
Confidence 346778899999999999987654 899999999999999974 22222111 1 1 23334444555777
Q ss_pred hhhchhHHHH
Q 040333 305 WSCGPANLFR 314 (513)
Q Consensus 305 W~~G~~~~~~ 314 (513)
|..-.+..+.
T Consensus 340 ~~~DGLnsl~ 349 (372)
T KOG3916|consen 340 QTQDGLNSLK 349 (372)
T ss_pred hhhcccccee
Confidence 8777665544
No 92
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=92.57 E-value=0.73 Score=50.09 Aligned_cols=97 Identities=18% Similarity=0.241 Sum_probs=57.4
Q ss_pred CCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCc---HHHH---HHHHHHHHHHhhcCCcEEEEEec--
Q 040333 83 FPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTD---PAIK---QMVEQECQRWAAKGINIRYQIRE-- 153 (513)
Q Consensus 83 ~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD---~t~~---~l~~~~~~~~~~~~~~i~~i~~~-- 153 (513)
.....|+|||.||. ..++..|.++ |.+..+| |+.+|+. +..+ ++++.+|+. ....+-++|..
T Consensus 54 ~~~~aivvp~k~e~~~~~~gvl~~i-----p~~c~ii-~vsns~r~~~d~~~~e~~~~~~~~~~---~~~~~~~vhq~dp 124 (694)
T PRK14502 54 EKKMAIVLPIKDEDLKVFEGVLSGI-----PHDCLMI-VISNSSKQEVDNFKNEKDIVNRFCRI---THRQAIVVHQKNP 124 (694)
T ss_pred HhCcEEEEEcCCCchhHHhhHhhcC-----CCCCeEE-EEeCCCCCchHHHHHHHHHHHHHHHh---hcCceEEEEcCCH
Confidence 34689999999999 6776666554 7666666 6666653 1122 123333331 11233334331
Q ss_pred ------------------C-CCCCchhHHHHHhhhcc--------cccCCh--HHHHHHHHHHh
Q 040333 154 ------------------N-RTGYKAGALKEGLKRSY--------VKHCEY--PDYLRRAIPYL 188 (513)
Q Consensus 154 ------------------~-~~g~Ka~aln~gl~~a~--------v~DaD~--pd~L~~lv~~~ 188 (513)
. -..||+.++-.|+-.|+ +.|||. |....+.+..+
T Consensus 125 ~~a~a~~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~pg~v~ey~~~y 188 (694)
T PRK14502 125 ELANAIADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIPGAVWEYAKHF 188 (694)
T ss_pred HHHHHHHHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCCchHHHHHHHH
Confidence 1 12269988888887764 469999 76666655544
No 93
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=91.02 E-value=1.5 Score=41.57 Aligned_cols=81 Identities=10% Similarity=0.087 Sum_probs=51.1
Q ss_pred HHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhcc---------
Q 040333 101 ISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRSY--------- 171 (513)
Q Consensus 101 ~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a~--------- 171 (513)
=||.|+.+|+-|++.++| +.|+.+.+..+.-+++++ +..++++++..+... ...++...++.+.
T Consensus 46 ~~LpSl~~QTd~dF~~lv-~~~~~~P~~~~~rL~~l~----~~~p~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 118 (234)
T PF11316_consen 46 YCLPSLRAQTDQDFTWLV-LFDDDLPEPYRERLRDLL----ADYPQFRIVFRPPGP--HRDAMRRAINAARRDGADPVLQ 118 (234)
T ss_pred HHhhHHHhccCCCeEEEE-EECCCCCHHHHHHHHHHh----ccCCCcEEEecCCch--HHHHHHHHHhhhccCCCCEEEE
Confidence 489999999999988877 455544443333334333 334566666554333 5566777763331
Q ss_pred -cccCCh---HHHHHHHHHHh
Q 040333 172 -VKHCEY---PDYLRRAIPYL 188 (513)
Q Consensus 172 -v~DaD~---pd~L~~lv~~~ 188 (513)
-+|+|. .|+++++-.+.
T Consensus 119 ~RLDdDDAl~~dFV~rlr~~a 139 (234)
T PF11316_consen 119 FRLDDDDALHRDFVARLRRAA 139 (234)
T ss_pred EEECCcchhhHHHHHHHHHHH
Confidence 247766 99999888776
No 94
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=87.99 E-value=0.84 Score=44.44 Aligned_cols=53 Identities=19% Similarity=0.171 Sum_probs=41.7
Q ss_pred eEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhh
Q 040333 85 VVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAA 142 (513)
Q Consensus 85 ~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~ 142 (513)
.++-.|=+.||+..++++|+|++-. -++. |+.-+||||+|.+ ++.++|+++++
T Consensus 88 ~~~~~iRvKnE~~tl~~si~S~Lpa---i~~g-VI~yNdc~D~t~E-iil~fckkyP~ 140 (347)
T PF06306_consen 88 NPWAFIRVKNEAMTLAESIESILPA---IDEG-VIGYNDCTDGTEE-IILEFCKKYPS 140 (347)
T ss_pred CcceEEEEcchhhhHHHHHHHHHHH---Hhcc-EEEeecCCCCHHH-HHHHHHHhCcc
Confidence 4788899999999999999999831 0233 4477999999966 67778988765
No 95
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=80.72 E-value=45 Score=33.29 Aligned_cols=54 Identities=17% Similarity=0.241 Sum_probs=40.9
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCcHHHHHHHHH
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSWPS-DRLVIQVLDDSTDPAIKQMVEQ 135 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~-~~~~I~V~DdstD~t~~~l~~~ 135 (513)
...|.+.|++=++|.++.++++++.++.+. |. .+.-|+|.-|+.++.+...++.
T Consensus 64 ~~~~v~pvvVf~csR~~~lr~~v~kll~yr-PsaekfpiiVSQD~~~e~vk~~~~~ 118 (411)
T KOG1413|consen 64 NWPPVIPVVVFACSRADALRRHVKKLLEYR-PSAEKFPIIVSQDCEKEAVKKKLLS 118 (411)
T ss_pred CCCCceeEEEEecCcHHHHHHHHHHHHHhC-cchhhcCEEEeccCCcHHHHHHHHH
Confidence 345678899999999999999999999877 54 3555678877777665555554
No 96
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=68.72 E-value=2.1e+02 Score=32.33 Aligned_cols=171 Identities=15% Similarity=0.150 Sum_probs=94.7
Q ss_pred CCchhHHHHHhhhcc-----cccCCh----HHHH--HHHHHHhhc-----------------CCCeEEEeeeEEEecCCC
Q 040333 157 GYKAGALKEGLKRSY-----VKHCEY----PDYL--RRAIPYLVQ-----------------NSDIALVQARWRFVNANE 208 (513)
Q Consensus 157 g~Ka~aln~gl~~a~-----v~DaD~----pd~L--~~lv~~~~~-----------------~~~v~~V~~~~~~~n~~~ 208 (513)
.||+.|.|+++--.+ ..|+.- +++| +.+++.|++ .+.+.+++.+-..-..+-
T Consensus 274 eGK~eNQNhaiiF~rGe~lQ~IDmNQDnYleE~lK~rnlL~Ef~~~~~~~~~~~~~~~~~~~~~~~aIlG~RE~IFs~~v 353 (817)
T PF02364_consen 274 EGKPENQNHAIIFTRGEYLQTIDMNQDNYLEEALKMRNLLEEFEEMHGDSSSPYIPGIEEEGKRPVAILGFREHIFSENV 353 (817)
T ss_pred CCCccccceeEEEEccccccccccchhhhHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccCCCCceEecccceEecCCc
Confidence 389999999885543 345554 3333 345555633 234677777665555444
Q ss_pred cHHHHH---HHhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCC----CccchHHHHHHHHhCCCeEEE
Q 040333 209 CLLTRM---QEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDR----TTVEDMDLAVRASLKGWKFVY 281 (513)
Q Consensus 209 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~----~~~ED~~l~~rl~~~G~ki~~ 281 (513)
+.+... |+..+.. ..|+.-...+ .-.--|+-=++.|-....-||-... +++||..-++....+|.++.+
T Consensus 354 g~L~~~aa~qE~~F~T---l~qR~la~p~-~rlHYGHPD~~n~~f~~TRGGvSKAsk~lhLsEDIfaG~n~~lRGG~i~h 429 (817)
T PF02364_consen 354 GSLGDFAAGQEQSFGT---LFQRTLANPL-VRLHYGHPDVFNRIFMTTRGGVSKASKGLHLSEDIFAGMNATLRGGRIKH 429 (817)
T ss_pred chHHHHhhhhhHHHHH---HHHHHHhcch-hhccCCCchhhhhhheeccCccchHhhcccccHHHHHHHHHHhcCCceee
Confidence 433332 2222111 1222111111 0001166667777776667776542 569999999999999999999
Q ss_pred eccceecccCCcCHHHHHHHHHHhhhchh-HHHHHhhHhHhh-cCCCChhHHHHH
Q 040333 282 LGDLQVKSELPSTFKAFRFQQHRWSCGPA-NLFRKMVMEIIR-NKKVKFWKKVYV 334 (513)
Q Consensus 282 ~~~~~~~~~~p~t~~~~~~Qr~RW~~G~~-~~~~~~~~~~~~-~~~~~~~~~~~~ 334 (513)
+.-..|=----..+.+-..=..+-+.|+- |.+. ++..+ ..++++.+-+.+
T Consensus 430 ~ey~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LS---Re~yrLg~~ld~~R~LSf 481 (817)
T PF02364_consen 430 CEYIQCGKGRDVGFNSILNFETKIASGMGEQMLS---REYYRLGTRLDFFRFLSF 481 (817)
T ss_pred hhhhhcccccccCchhhhhhHhHhcCCccchhhh---HHHHHhhccCCHHHHHHH
Confidence 88777643333455544444555666766 3333 23332 334555555543
No 97
>PLN02917 CMP-KDO synthetase
Probab=68.07 E-value=1.1e+02 Score=30.03 Aligned_cols=45 Identities=7% Similarity=0.011 Sum_probs=30.3
Q ss_pred ccccchHhhHHHHHHhCCcCCCCc-cchHHHHHHHHhCCCeEEEec
Q 040333 239 FNGTAGVWRIAAINEAGGWKDRTT-VEDMDLAVRASLKGWKFVYLG 283 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~~~-~ED~~l~~rl~~~G~ki~~~~ 283 (513)
.+.+-.++|++.+.....++.+.. .|-+-.-+++..+|+++..++
T Consensus 221 ~n~Giy~f~~~~L~~l~~l~~~n~e~e~yLtdl~~le~G~~i~~~~ 266 (293)
T PLN02917 221 LHLGIQSYDAKFLKIYPELPPTPLQLEEDLEQLKVLENGYKMKVIK 266 (293)
T ss_pred EEEEEEEeCHHHHHHHHcCCCCcccchhccHHHHHHhCCCceEEEE
Confidence 356778899999988776666544 233322335779999987665
No 98
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=66.44 E-value=36 Score=30.46 Aligned_cols=91 Identities=20% Similarity=0.274 Sum_probs=51.6
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhh-
Q 040333 90 IPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLK- 168 (513)
Q Consensus 90 IP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~- 168 (513)
+|. +....++.+++++.+.. -++++| |.++..++ ..+. +.. ..++.++...+...|-..++..|++
T Consensus 20 l~~-~g~pll~~~i~~l~~~~--~~~iiv-v~~~~~~~----~~~~----~~~-~~~v~~v~~~~~~~g~~~si~~~l~~ 86 (188)
T TIGR03310 20 LPY-KGKTILEHVVDNALRLF--FDEVIL-VLGHEADE----LVAL----LAN-HSNITLVHNPQYAEGQSSSIKLGLEL 86 (188)
T ss_pred ccc-CCeeHHHHHHHHHHHcC--CCcEEE-EeCCcHHH----HHHH----hcc-CCCeEEEECcChhcCHHHHHHHHhcC
Confidence 344 45678899998888653 234444 44443222 1221 111 2356666544333356677777776
Q ss_pred hc-----ccccCCh----HHHHHHHHHHhhcCCC
Q 040333 169 RS-----YVKHCEY----PDYLRRAIPYLVQNSD 193 (513)
Q Consensus 169 ~a-----~v~DaD~----pd~L~~lv~~~~~~~~ 193 (513)
.. .+.+||. ++.++++++.+..++.
T Consensus 87 ~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~ 120 (188)
T TIGR03310 87 PVQSDGYLFLLGDQPFVTPDIIQLLLEAFALKND 120 (188)
T ss_pred CCCCCEEEEEeCCcCCCCHHHHHHHHHHHHhCCC
Confidence 22 1468887 8889999887644443
No 99
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=64.30 E-value=1.3e+02 Score=28.34 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=30.7
Q ss_pred cchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEe
Q 040333 242 TAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYL 282 (513)
Q Consensus 242 ~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~ 282 (513)
+-..||++++++...|.+..+ .|+.+ .+|+..+|.|+...
T Consensus 178 GIYayr~~~L~~f~~~~ps~LE~~E~LE-QLR~Le~G~kI~v~ 219 (247)
T COG1212 178 GIYAYRAGFLERFVALKPSPLEKIESLE-QLRVLENGEKIHVE 219 (247)
T ss_pred ehHHhHHHHHHHHHhcCCchhHHHHHHH-HHHHHHcCCeeEEE
Confidence 345799999999999987655 56665 56888999998543
No 100
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=62.26 E-value=43 Score=29.75 Aligned_cols=83 Identities=18% Similarity=0.259 Sum_probs=47.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhcc--
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRSY-- 171 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a~-- 171 (513)
++...++.+++++.+.. -+++.| |.++. +...... . ....+.++..+....|-..++..|++.+.
T Consensus 24 ~g~~li~~~i~~l~~~~--~~~i~v-v~~~~-~~~~~~~-------~--~~~~~~~~~~~~~~~G~~~~i~~al~~~~~~ 90 (186)
T cd04182 24 DGKPLLRHALDAALAAG--LSRVIV-VLGAE-ADAVRAA-------L--AGLPVVVVINPDWEEGMSSSLAAGLEALPAD 90 (186)
T ss_pred CCeeHHHHHHHHHHhCC--CCcEEE-ECCCc-HHHHHHH-------h--cCCCeEEEeCCChhhCHHHHHHHHHHhcccc
Confidence 45678999999988652 234443 44332 2221111 1 12344444444333456777888877652
Q ss_pred -----cccCCh----HHHHHHHHHHhh
Q 040333 172 -----VKHCEY----PDYLRRAIPYLV 189 (513)
Q Consensus 172 -----v~DaD~----pd~L~~lv~~~~ 189 (513)
+..||. ++.++++++.+.
T Consensus 91 ~~~vlv~~~D~P~i~~~~i~~l~~~~~ 117 (186)
T cd04182 91 ADAVLILLADQPLVTAETLRALIDAFR 117 (186)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 457776 888888888773
No 101
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=62.16 E-value=32 Score=33.04 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=45.7
Q ss_pred ccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccccccchHhhHH
Q 040333 173 KHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIA 249 (513)
Q Consensus 173 ~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~ 249 (513)
.|.|. .+-|.+++..+ ||+-...-|.......... ..+.... .....+..+.-+|++.+++|+
T Consensus 93 ~DDDtyv~~~~L~~~L~~~--~~~~~~yiG~~~~~~~~~~-~~~~~~~-----------~~~~~~~~f~~GGaG~vlSr~ 158 (252)
T PF02434_consen 93 ADDDTYVNVENLRRLLSKY--DPSEPIYIGRPSGDRPIEI-IHRFNPN-----------KSKDSGFWFATGGAGYVLSRA 158 (252)
T ss_dssp EETTEEE-HHHHHHHHTTS---TTS--EEE-EE----------------------------------EE-GGG-EEEEHH
T ss_pred EeCCceecHHHHHHHHhhC--CCccCEEeeeeccCcccee-ecccccc-----------ccCcCceEeeCCCeeHHHhHH
Confidence 57777 88888988887 4544444454432221110 0000000 011112233456899999999
Q ss_pred HHHHhCC------cCCC----CccchHHHHHHHHh-CCCeEEEec
Q 040333 250 AINEAGG------WKDR----TTVEDMDLAVRASL-KGWKFVYLG 283 (513)
Q Consensus 250 ~l~~~Gg------~~~~----~~~ED~~l~~rl~~-~G~ki~~~~ 283 (513)
+++++.. +... ...||+.++.-+.. .|.+....+
T Consensus 159 ~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~ 203 (252)
T PF02434_consen 159 LLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSP 203 (252)
T ss_dssp HHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-T
T ss_pred HHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeech
Confidence 9998722 2221 24799999999988 888876654
No 102
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase.
Probab=55.83 E-value=1.1e+02 Score=29.00 Aligned_cols=41 Identities=22% Similarity=0.208 Sum_probs=31.9
Q ss_pred cchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEec
Q 040333 242 TAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYLG 283 (513)
Q Consensus 242 ~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 283 (513)
+-.+||++++++.-.++...+ .|+.| .+|+..+|+++....
T Consensus 180 Giy~~~~~~L~~~~~~~~~~le~~e~le-qlr~le~g~~i~~~~ 222 (238)
T TIGR00466 180 GIYGYRAGFIEEYVAWKPCVLEEIEKLE-QLRVLYYGEKIHVKI 222 (238)
T ss_pred EEEeCCHHHHHHHHhCCCCcccccchhH-HHhhhhcCCceEEEE
Confidence 456799999999877766655 67777 568889999987654
No 103
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=53.28 E-value=60 Score=30.43 Aligned_cols=148 Identities=17% Similarity=0.141 Sum_probs=71.2
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecC----CCCCchhHHHHHhhh
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIREN----RTGYKAGALKEGLKR 169 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~----~~g~Ka~aln~gl~~ 169 (513)
+....+..+++++++.... ++ |+|.-| |+...... +++ +..+.+. |+. ...+...++..|++.
T Consensus 22 ~GkpLi~~ti~~a~~s~~~-d~--IvVstd--~~~i~~~a----~~~---g~~v~~~-r~~~l~~d~~~~~~si~~~l~~ 88 (222)
T TIGR03584 22 CGKPMIAYSIEAALNSGLF-DK--VVVSTD--DEEIAEVA----KSY---GASVPFL-RPKELADDFTGTAPVVKHAIEE 88 (222)
T ss_pred CCcCHHHHHHHHHHhCCCC-CE--EEEeCC--CHHHHHHH----HHc---CCEeEEe-ChHHHcCCCCCchHHHHHHHHH
Confidence 4567889999999876544 23 324322 23222222 222 3333332 322 122456667777654
Q ss_pred c------c---cccCCh----HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHH-H-HHhhhhhhhhHH-HHhhhhc
Q 040333 170 S------Y---VKHCEY----PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTR-M-QEMSLDYHFKVE-QEVGSAT 233 (513)
Q Consensus 170 a------~---v~DaD~----pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~-~-~~~~~~~~~~~~-~~~~~~~ 233 (513)
. . ++++|. ++.+++++..+.+ .+.+.+.+-...... ..+.. . ............ ...+...
T Consensus 89 l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~-~~~ds~~sv~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~rQd~ 165 (222)
T TIGR03584 89 LKLQKQYDHACCIYATAPFLQAKILKEAFELLKQ-PNAHFVFSVTSFAFP--IQRAFKLKENGGVEMFFPEHFNTRSQDL 165 (222)
T ss_pred HhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHh-CCCCEEEEeeccCCC--hHHheEECCCCcEEecCCCcccCCCCCC
Confidence 3 1 356776 8999999998844 344444333221100 00000 0 000000000000 0011122
Q ss_pred cCcccccccchHhhHHHHHHhCCc
Q 040333 234 HAFFGFNGTAGVWRIAAINEAGGW 257 (513)
Q Consensus 234 ~~~~~~~G~~~~~Rr~~l~~~Gg~ 257 (513)
...+..+|+..+++++.+.+-+.+
T Consensus 166 ~~~y~~nga~y~~~~~~~~~~~~~ 189 (222)
T TIGR03584 166 EEAYHDAGQFYWGKSQAWLESGPI 189 (222)
T ss_pred chheeeCCeEEEEEHHHHHhcCCc
Confidence 334456899999999999886554
No 104
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=52.46 E-value=53 Score=28.50 Aligned_cols=93 Identities=19% Similarity=0.307 Sum_probs=57.3
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhh
Q 040333 90 IPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKR 169 (513)
Q Consensus 90 IP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~ 169 (513)
+|. ++...++.+++.+.+... .+++| +..+ ++..+ .. ...+++++..++...|-..++..|++.
T Consensus 19 ~~i-~g~~li~~~l~~l~~~~~--~~Ivv-v~~~--~~~~~-~~---------~~~~~~~v~~~~~~~G~~~sl~~a~~~ 82 (160)
T PF12804_consen 19 LPI-GGKPLIERVLEALREAGV--DDIVV-VTGE--EEIYE-YL---------ERYGIKVVVDPEPGQGPLASLLAALSQ 82 (160)
T ss_dssp SEE-TTEEHHHHHHHHHHHHTE--SEEEE-EEST--HHHHH-HH---------TTTTSEEEE-STSSCSHHHHHHHHHHT
T ss_pred eeE-CCccHHHHHHHHhhccCC--ceEEE-ecCh--HHHHH-HH---------hccCceEEEeccccCChHHHHHHHHHh
Confidence 455 777889999998876542 33333 3333 22211 11 124577776655556788888888887
Q ss_pred c-c-----cccCCh----HHHHHHHHHHhhcC-CCeEEEe
Q 040333 170 S-Y-----VKHCEY----PDYLRRAIPYLVQN-SDIALVQ 198 (513)
Q Consensus 170 a-~-----v~DaD~----pd~L~~lv~~~~~~-~~v~~V~ 198 (513)
. . ++.||. ++.+++++..+.++ .++.++.
T Consensus 83 ~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~~~~~i~~~~ 122 (160)
T PF12804_consen 83 LPSSEPVLVLPCDQPFLSPELLRRLLEALEKSPADIVVPV 122 (160)
T ss_dssp STTSSEEEEEETTETTS-HHHHHHHHHHHHHTTTSEEEEE
T ss_pred cccCCCcEEEeCCccccCHHHHHHHHHHHhccCCcEEEEE
Confidence 6 2 467887 89999999988543 3444333
No 105
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=50.78 E-value=1e+02 Score=28.02 Aligned_cols=42 Identities=17% Similarity=0.080 Sum_probs=31.4
Q ss_pred ccccchHhhHHHHHHhCCcCC---CCccchHHHHHHHHhCCCeEE
Q 040333 239 FNGTAGVWRIAAINEAGGWKD---RTTVEDMDLAVRASLKGWKFV 280 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~---~~~~ED~~l~~rl~~~G~ki~ 280 (513)
+.|++.++++++++.+..... ....||..++..+.+.|.+..
T Consensus 148 ~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~~~i~~~ 192 (195)
T PF01762_consen 148 CSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEKLGIKPI 192 (195)
T ss_pred CCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHHCCCCcc
Confidence 468999999999888643222 223899999999999887654
No 106
>PLN02458 transferase, transferring glycosyl groups
Probab=49.55 E-value=2.5e+02 Score=27.98 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=41.0
Q ss_pred CCeEEEEEecCCC-h---HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCC---
Q 040333 83 FPVVLIQIPMFNE-K---EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENR--- 155 (513)
Q Consensus 83 ~P~VsIiIP~yNE-~---~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~--- 155 (513)
.+.+-||-|+|.. . ..+.+.-..|.-..+| ...+| |-|++.-+.+..+.+ ..+...+++..+.+
T Consensus 111 ~rlIivVTPTY~rR~~Q~a~LTRLahTL~lVp~p-L~WIV-VEd~~~t~~va~lLr-------rsGl~y~HL~~k~~~~~ 181 (346)
T PLN02458 111 RRLVIIVTPISTKDRYQGVLLRRLANTLRLVPPP-LLWIV-VEGQSDSEEVSEMLR-------KTGIMYRHLVFKENFTD 181 (346)
T ss_pred CceEEEECCCCCCcchhHHHHHHHHHHHhcCCCC-ceEEE-EeCCCCCHHHHHHHH-------HcCCceEEeccCCCCCC
Confidence 4568899999983 3 4666666666655444 44444 555432222222333 22444444432211
Q ss_pred -CCCchhHHHHHhhhc
Q 040333 156 -TGYKAGALKEGLKRS 170 (513)
Q Consensus 156 -~g~Ka~aln~gl~~a 170 (513)
.+.....+|.|++..
T Consensus 182 ~~~r~~~QRN~AL~~I 197 (346)
T PLN02458 182 PEAELDHQRNLALRHI 197 (346)
T ss_pred ccchhHHHHHHHHHHH
Confidence 111234588888776
No 107
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=47.19 E-value=1.7e+02 Score=26.29 Aligned_cols=90 Identities=12% Similarity=0.139 Sum_probs=48.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhc---
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRS--- 170 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a--- 170 (513)
++...++.+++.+++.. -.+++| |... .++..+...+.. ....++.++...+...|...++..|++++
T Consensus 24 ~g~~ll~~~i~~~~~~~--~~~i~v-v~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~G~~~si~~gl~~~~~~ 94 (190)
T TIGR03202 24 GETTLGSASLKTALSSR--LSKVIV-VIGE-KYAHLSWLDPYL-----LADERIMLVCCRDACEGQAHSLKCGLRKAEAM 94 (190)
T ss_pred CCccHHHHHHHHHHhCC--CCcEEE-EeCC-ccchhhhhhHhh-----hcCCCeEEEECCChhhhHHHHHHHHHHHhccC
Confidence 56778889887766532 133433 4432 233222122111 11234454433332224567777787764
Q ss_pred -----ccccCCh----HHHHHHHHHHhhcCC
Q 040333 171 -----YVKHCEY----PDYLRRAIPYLVQNS 192 (513)
Q Consensus 171 -----~v~DaD~----pd~L~~lv~~~~~~~ 192 (513)
.+.+||. ++.+++++..+.+.+
T Consensus 95 ~~d~vlv~~~D~P~v~~~~i~~L~~~~~~~~ 125 (190)
T TIGR03202 95 GADAVVILLADQPFLTADVINALLALAKRRP 125 (190)
T ss_pred CCCeEEEEeCCCCCCCHHHHHHHHHHHhhCC
Confidence 1468888 889999988874333
No 108
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=46.94 E-value=61 Score=31.02 Aligned_cols=96 Identities=13% Similarity=0.167 Sum_probs=49.7
Q ss_pred EEEEEec-CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHH
Q 040333 86 VLIQIPM-FNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALK 164 (513)
Q Consensus 86 VsIiIP~-yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln 164 (513)
.||+|-+ |+..+.+.+.|+++.+..+- .+++|+=.++.+-+... ++...+..|+++..+ ++ .-.++-
T Consensus 1 fTvvi~t~~~R~~~L~~~l~~l~~~~~l-~~IvVvWn~~~~~P~~~--------~~~~~~vpV~~~~~~-~n--sLnnRF 68 (247)
T PF09258_consen 1 FTVVINTSYKRSDLLKRLLRHLASSPSL-RKIVVVWNNPNPPPPSS--------KWPSTGVPVRVVRSS-RN--SLNNRF 68 (247)
T ss_dssp EEEEEEE-SS-HHHHHHHHHHHTTSTTE-EEEEEEEE-TS--THHH--------HHT---S-EEEEEES-SH--HGGGGG
T ss_pred CEEEEEecccchHHHHHHHHHHHcCCCC-CeEEEEeCCCCCCCccc--------ccCCCCceEEEEecC-Cc--cHHhcC
Confidence 3788888 99999999999999766543 23333233432222211 133445777777432 11 111111
Q ss_pred H---Hhhh-c-ccccCCh---HHHHHHHHHHhhcCCC
Q 040333 165 E---GLKR-S-YVKHCEY---PDYLRRAIPYLVQNSD 193 (513)
Q Consensus 165 ~---gl~~-a-~v~DaD~---pd~L~~lv~~~~~~~~ 193 (513)
. .++. | ..+|.|. ++.|+.......++|+
T Consensus 69 ~p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W~~~pd 105 (247)
T PF09258_consen 69 LPDPEIETDAVLSLDDDVMLSCDELEFAFQVWREFPD 105 (247)
T ss_dssp S--TT--SSEEEEEETTEEE-HHHHHHHHHHHCCSTT
T ss_pred cCccccCcceEEEecCCcccCHHHHHHHHHHHHhChh
Confidence 1 1111 1 1357788 8888888877766665
No 109
>TIGR02584 cas_NE0113 CRISPR-associated protein, NE0113 family. Members of this minor CRISPR-associated (Cas) protein family are found in cas gene clusters in Vibrio vulnificus YJ016, Nitrosomonas europaea ATCC 19718, Mannheimia succiniciproducens MBEL55E, and Verrucomicrobium spinosum.
Probab=44.82 E-value=2.6e+02 Score=25.90 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=28.5
Q ss_pred EEEecCCCh-HHHHHHHHHHHcCCCC--CCceEEEEEcCCCcHHHH
Q 040333 88 IQIPMFNEK-EVYKISIGAACGLSWP--SDRLVIQVLDDSTDPAIK 130 (513)
Q Consensus 88 IiIP~yNE~-~~l~~~l~sl~~q~yp--~~~~~I~V~DdstD~t~~ 130 (513)
|++.+-+.. .++.++|.++..+..| .+++.|+-.-++.+...+
T Consensus 1 ILvat~G~sPQVVTETLyaL~~~g~~~~pdEi~vItT~~g~~~~~~ 46 (209)
T TIGR02584 1 ILLCVSGMSPQIITETIYALAQESPPVVPEEIHVITTSDGKRDIQQ 46 (209)
T ss_pred CEEEecCCCCchHHHHHHHHHhcCCCCCCCeEEEEEccCcHHHHHH
Confidence 345555554 7999999999988777 677666433444444433
No 110
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=42.18 E-value=1.2e+02 Score=26.87 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=46.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhcc--
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRSY-- 171 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a~-- 171 (513)
+....++.+++.+.+. -.++.| |..+..+. .. ..+++++..+....|...++..|++...
T Consensus 24 ~g~~ll~~~i~~l~~~---~~~iiv-v~~~~~~~----~~----------~~~~~~v~~~~~~~G~~~si~~~l~~~~~~ 85 (181)
T cd02503 24 GGKPLLEHVLERLKPL---VDEVVI-SANRDQER----YA----------LLGVPVIPDEPPGKGPLAGILAALRAAPAD 85 (181)
T ss_pred CCEEHHHHHHHHHHhh---cCEEEE-ECCCChHH----Hh----------hcCCcEeeCCCCCCCCHHHHHHHHHhcCCC
Confidence 4567888888888754 133333 33322111 11 1234555433334467788888887752
Q ss_pred ---cccCCh----HHHHHHHHHHh
Q 040333 172 ---VKHCEY----PDYLRRAIPYL 188 (513)
Q Consensus 172 ---v~DaD~----pd~L~~lv~~~ 188 (513)
+..||. ++.+++++..+
T Consensus 86 ~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 86 WVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred eEEEEeCCcCCCCHHHHHHHHHhh
Confidence 468888 88999888876
No 111
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=41.53 E-value=2.5e+02 Score=27.72 Aligned_cols=78 Identities=15% Similarity=0.274 Sum_probs=45.7
Q ss_pred CCeEEEEEecCCCh---HHHHHHHHHHHcCCCCCCceEEEEEcC-CCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 83 FPVVLIQIPMFNEK---EVYKISIGAACGLSWPSDRLVIQVLDD-STDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 83 ~P~VsIiIP~yNE~---~~l~~~l~sl~~q~yp~~~~~I~V~Dd-stD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
.|.|-||-|+|+.. ..+.+.-.++.. -|+...+| |-|+ +..+....+.+ ..+..-+++..+.+.++
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~~--V~nLhWIV-VEd~~~~~p~v~~~L~-------rtgl~ythl~~~t~~~~ 155 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLRL--VPNLHWIV-VEDGEGTTPEVSGILR-------RTGLPYTHLVHKTPMGY 155 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHhh--cCCeeEEE-EecCCCCCHHHHHHHH-------HcCCceEEEeccCCCCC
Confidence 67899999999988 345555444443 24444444 6666 55555454544 23555555555545555
Q ss_pred c----hhHHHHHhhhc
Q 040333 159 K----AGALKEGLKRS 170 (513)
Q Consensus 159 K----a~aln~gl~~a 170 (513)
| -..+|.|++..
T Consensus 156 ~~~rg~~qRn~aL~~i 171 (330)
T KOG1476|consen 156 KARRGWEQRNMALRWI 171 (330)
T ss_pred ccccchhHHHHHHHHH
Confidence 5 33667777654
No 112
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=41.32 E-value=2.1e+02 Score=26.12 Aligned_cols=91 Identities=15% Similarity=0.187 Sum_probs=49.2
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhh
Q 040333 89 QIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLK 168 (513)
Q Consensus 89 iIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~ 168 (513)
++|. ++...++.+++++.+.... ++++| |.++......+ .. ++. .....+.++. . . .+...++..|++
T Consensus 22 l~~i-~Gkpll~~~i~~l~~~~~~-~~ivV-v~~~~~~~~~~----~~-~~~-~~~~~~~~~~-~-~-~~~~~si~~al~ 89 (218)
T cd02516 22 FLEL-GGKPVLEHTLEAFLAHPAI-DEIVV-VVPPDDIDLAK----EL-AKY-GLSKVVKIVE-G-G-ATRQDSVLNGLK 89 (218)
T ss_pred eeEE-CCeEHHHHHHHHHhcCCCC-CEEEE-EeChhHHHHHH----HH-Hhc-ccCCCeEEEC-C-c-hHHHHHHHHHHH
Confidence 3444 4568899999999865432 34433 44432222111 11 111 1122344432 1 1 135677888877
Q ss_pred hc---c-----cccCCh----HHHHHHHHHHhhcC
Q 040333 169 RS---Y-----VKHCEY----PDYLRRAIPYLVQN 191 (513)
Q Consensus 169 ~a---~-----v~DaD~----pd~L~~lv~~~~~~ 191 (513)
.. . +.++|. ++.++++++.+.+.
T Consensus 90 ~~~~~~~~~vlv~~~D~P~i~~~~i~~li~~~~~~ 124 (218)
T cd02516 90 ALPDADPDIVLIHDAARPFVSPELIDRLIDALKEY 124 (218)
T ss_pred hcccCCCCEEEEccCcCCCCCHHHHHHHHHHHhhC
Confidence 54 1 458887 89999999987443
No 113
>PF05045 RgpF: Rhamnan synthesis protein F; InterPro: IPR007739 This family consists of a group of proteins which are related to the Streptococcal rhamnose-glucose polysaccharide assembly protein (RgpF). Rhamnan backbones are found in several O-polysaccharides found in phytopathogenic bacteria and are regarded as pathogenic factors [].
Probab=39.86 E-value=3.5e+02 Score=28.87 Aligned_cols=24 Identities=13% Similarity=0.310 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEeeeE
Q 040333 178 PDYLRRAIPYLVQNSDIALVQARW 201 (513)
Q Consensus 178 pd~L~~lv~~~~~~~~v~~V~~~~ 201 (513)
++...+.++.|++||++|+|.+..
T Consensus 383 ~~~v~~Il~~F~~~p~lGlv~P~~ 406 (498)
T PF05045_consen 383 KEYVDNILSAFEDDPRLGLVIPDI 406 (498)
T ss_pred HHHHHHHHHHHhhCCCceEEeCCc
Confidence 577788888998899999998875
No 114
>PF09623 Cas_NE0113: CRISPR-associated protein NE0113 (Cas_NE0113); InterPro: IPR019092 Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) are a family of DNA direct repeats separated by regularly sized non-repetitive spacer sequences that are found in most bacterial and archaeal genomes []. CRISPRs appear to provide acquired resistance against bacteriophages, possibly acting with an RNA interference-like mechanism to inhibit gene functions of invasive DNA elements [, ]. Differences in the number and type of spacers between CRISPR repeats correlate with phage sensitivity. It is thought that following phage infection, bacteria integrate new spacers derived from phage genomic sequences, and that the removal or addition of particular spacers modifies the phage-resistance phenotype of the cell. Therefore, the specificity of CRISPRs may be determined by spacer-phage sequence similarity. In addition, there are many protein families known as CRISPR-associated sequences (Cas), which are encoded in the vicinity of CRISPR loci []. CRISPR/cas gene regions can be quite large, with up to 20 different, tandem-arranged cas genes next to a CRISPR cluster or filling the region between two repeat clusters. Cas genes and CRISPRs are found on mobile genetic elements such as plasmids, and have undergone extensive horizontal transfer. Cas proteins are thought to be involved in the propagation and functioning of CRISPRs. Some Cas proteins show similarity to helicases and repair proteins, although the functions of most are unknown. Cas families can be divided into subtypes according to operon organisation and phylogeny. This entry represents a Cas protein family found in both bacteria and arachaea. The function of these proteins is unknown.
Probab=39.26 E-value=1.5e+02 Score=27.87 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=34.7
Q ss_pred EEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHH----HHHHHHH
Q 040333 87 LIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMV----EQECQRW 140 (513)
Q Consensus 87 sIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~----~~~~~~~ 140 (513)
.|+|.+-+.. .++.+++.++.++.++.+++.|+--.++.......+. +++|++|
T Consensus 3 ~iLlatlG~sPqVVTETL~aL~~~g~~p~EV~vitT~~~~~~~~~~ll~g~~~~l~~~y 61 (224)
T PF09623_consen 3 NILLATLGTSPQVVTETLYALAQQGEIPDEVHVITTRDGAVRAALRLLDGGLQRLCQDY 61 (224)
T ss_pred eEEEEecCCCchHHHHHHHHHHcCCCCCCEEEEEECCChHHHHHHHHHHHHHHHHHHhh
Confidence 3667777765 7999999999998887788776433333333332233 4556555
No 115
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=37.64 E-value=3e+02 Score=25.25 Aligned_cols=86 Identities=22% Similarity=0.308 Sum_probs=50.1
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhh
Q 040333 90 IPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKR 169 (513)
Q Consensus 90 IP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~ 169 (513)
+|+-+ ...+..+++++.+.. -.++.| |+.. .++..+...+ ..+++++.++. ..|.++++..|++.
T Consensus 21 ~~v~g-kpli~~~i~~l~~~~--i~~i~i-v~~~-~~~~i~~~~~---------~~~~~~~~~~~-~~g~~~ai~~a~~~ 85 (229)
T cd02540 21 HPLAG-KPMLEHVLDAARALG--PDRIVV-VVGH-GAEQVKKALA---------NPNVEFVLQEE-QLGTGHAVKQALPA 85 (229)
T ss_pred ceeCC-ccHHHHHHHHHHhCC--CCeEEE-EECC-CHHHHHHHhC---------CCCcEEEECCC-CCCCHHHHHHHHHh
Confidence 45544 488999999998653 234444 3322 1222221111 13566665443 34578888888765
Q ss_pred c----c---cccCCh----HHHHHHHHHHhhc
Q 040333 170 S----Y---VKHCEY----PDYLRRAIPYLVQ 190 (513)
Q Consensus 170 a----~---v~DaD~----pd~L~~lv~~~~~ 190 (513)
. . +.++|. ++.+.+++....+
T Consensus 86 ~~~~~~~vli~~~D~p~~~~~~i~~l~~~~~~ 117 (229)
T cd02540 86 LKDFEGDVLVLYGDVPLITPETLQRLLEAHRE 117 (229)
T ss_pred hccCCCeEEEEeCCccccCHHHHHHHHHHHHh
Confidence 3 1 457885 7888888887743
No 116
>PRK05339 PEP synthetase regulatory protein; Provisional
Probab=37.18 E-value=71 Score=30.92 Aligned_cols=21 Identities=14% Similarity=0.036 Sum_probs=16.6
Q ss_pred cchHHHHHHHHhCCCeEEEec
Q 040333 263 VEDMDLAVRASLKGWKFVYLG 283 (513)
Q Consensus 263 ~ED~~l~~rl~~~G~ki~~~~ 283 (513)
+-=.=+++-|..+|||+...|
T Consensus 154 tsKTPlS~YLA~~G~KvAN~P 174 (269)
T PRK05339 154 TSKTPTSLYLANKGIKAANYP 174 (269)
T ss_pred CCCcHHHHHHHccCCceEeeC
Confidence 344667888888999998876
No 117
>PF03618 Kinase-PPPase: Kinase/pyrophosphorylase; InterPro: IPR005177 This entry represents a family of uncharacterised proteins which are predicted to function as phosphotransferases.; GO: 0005524 ATP binding, 0016772 transferase activity, transferring phosphorus-containing groups
Probab=36.81 E-value=47 Score=31.90 Aligned_cols=21 Identities=19% Similarity=0.213 Sum_probs=15.9
Q ss_pred chHHHHHHHHhCCCeEEEecc
Q 040333 264 EDMDLAVRASLKGWKFVYLGD 284 (513)
Q Consensus 264 ED~~l~~rl~~~G~ki~~~~~ 284 (513)
-=.=+++-|..+|||+..+|=
T Consensus 149 sKTPlS~YLA~~G~KvAN~PL 169 (255)
T PF03618_consen 149 SKTPLSMYLANKGYKVANVPL 169 (255)
T ss_pred CCCchhHHHHhcCcceeecCc
Confidence 345577888889999988763
No 118
>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ].
Probab=35.10 E-value=79 Score=31.90 Aligned_cols=51 Identities=12% Similarity=0.084 Sum_probs=33.7
Q ss_pred ccccchHhhHHHHHHhCCcCCCC----ccchHHHHHHHHhCCCeEEEeccceecc
Q 040333 239 FNGTAGVWRIAAINEAGGWKDRT----TVEDMDLAVRASLKGWKFVYLGDLQVKS 289 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~~----~~ED~~l~~rl~~~G~ki~~~~~~~~~~ 289 (513)
+.++++.|-+.-+..--.+|+.. .+|.+.++.|+.-+||.+.--+..++++
T Consensus 207 f~aaGF~Fa~~~~~~eVP~DP~lp~lF~GEE~~~aaRlwT~GYD~Y~P~~~v~~H 261 (343)
T PF11397_consen 207 FWAAGFSFAPGHFVREVPYDPHLPFLFDGEEISMAARLWTHGYDFYSPTRNVLFH 261 (343)
T ss_pred eecccEEEcchhheecCCCCCCcccccccHHHHHHHHHHHcCCccccCCCceeEE
Confidence 33455555554444333677654 2999999999999999985545555553
No 119
>PRK13385 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional
Probab=33.72 E-value=2.7e+02 Score=25.88 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=47.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhcc--
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRSY-- 171 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a~-- 171 (513)
++...+..+++++.+...- ++++| |.++...... +..++++.....++.++.. .. +...++..|++...
T Consensus 28 ~gkpll~~~i~~~~~~~~~-~~ivV-v~~~~~~~~~----~~~~~~~~~~~~~~~~v~~--g~-~r~~sv~~gl~~~~~~ 98 (230)
T PRK13385 28 VGEPIFIHALRPFLADNRC-SKIII-VTQAQERKHV----QDLMKQLNVADQRVEVVKG--GT-ERQESVAAGLDRIGNE 98 (230)
T ss_pred CCeEHHHHHHHHHHcCCCC-CEEEE-EeChhhHHHH----HHHHHhcCcCCCceEEcCC--Cc-hHHHHHHHHHHhccCC
Confidence 5678899999988764322 34433 5543221211 1222222111123444421 11 23467777776531
Q ss_pred ----cccCCh----HHHHHHHHHHhhcC
Q 040333 172 ----VKHCEY----PDYLRRAIPYLVQN 191 (513)
Q Consensus 172 ----v~DaD~----pd~L~~lv~~~~~~ 191 (513)
+.|||. ++.+++++..+.+.
T Consensus 99 d~vli~~~d~P~i~~~~i~~li~~~~~~ 126 (230)
T PRK13385 99 DVILVHDGARPFLTQDIIDRLLEGVAKY 126 (230)
T ss_pred CeEEEccCCCCCCCHHHHHHHHHHHhhC
Confidence 358888 99999999988443
No 120
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=33.66 E-value=3.6e+02 Score=25.72 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=36.4
Q ss_pred EEEecCCChHHHHHHHH-HHHcC--CCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEE
Q 040333 88 IQIPMFNEKEVYKISIG-AACGL--SWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQI 151 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~-sl~~q--~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~ 151 (513)
|-.-.||.++.+..... +++++ ...++.+-|- +-.||+|.|.+ +.+.+...+...+.+-.+..
T Consensus 4 IA~~l~~~~~iL~~~~~~~ll~li~~LGp~nv~vSIyE~~S~D~T~~-~L~~L~~~L~~lgv~~~i~~ 70 (241)
T PF11735_consen 4 IAANLYNNEDILPSLWGDALLELIRFLGPENVFVSIYESGSWDGTKE-ALRALDAELDALGVPHSIVL 70 (241)
T ss_pred EEEEcccCHhHHHHHHHHHHHHHHHHhCcCeEEEEEEeCCCCccHHH-HHHHHHHHHHhCCCCeEEEe
Confidence 44457888877775555 55432 1222444443 44679999977 55566655655565555443
No 121
>PLN03183 acetylglucosaminyltransferase family protein; Provisional
Probab=32.09 E-value=6e+02 Score=26.45 Aligned_cols=68 Identities=12% Similarity=0.102 Sum_probs=41.3
Q ss_pred CCCCeEEEEEecC-CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHH--HhhcCCcEEEEEe
Q 040333 81 SNFPVVLIQIPMF-NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQR--WAAKGINIRYQIR 152 (513)
Q Consensus 81 ~~~P~VsIiIP~y-NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~--~~~~~~~i~~i~~ 152 (513)
...|+..-+|-++ |+.+.++++|+++ +.|+..+.|-++-.|++.....+... .+. ......||.++.+
T Consensus 75 ~~~~r~AYLI~~h~~d~~~l~RLL~aL---YhprN~y~IHlDkKS~~~er~~l~~~-v~~~~~~~~~~NV~vl~k 145 (421)
T PLN03183 75 DKLPRFAYLVSGSKGDLEKLWRTLRAL---YHPRNQYVVHLDLESPAEERLELASR-VENDPMFSKVGNVYMITK 145 (421)
T ss_pred CCCCeEEEEEEecCCcHHHHHHHHHHh---cCCCceEEEEecCCCChHHHHHHHHH-hhccchhhccCcEEEEec
Confidence 3578899999998 7879999998877 45666555544444665433323221 111 1123468887754
No 122
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=31.21 E-value=1.5e+02 Score=29.89 Aligned_cols=51 Identities=16% Similarity=0.188 Sum_probs=39.2
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHH
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVE 134 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~ 134 (513)
.+.+.|+|-++|..+.++..|+|+.+...-.. ..+++.-|--++....+++
T Consensus 30 ~~~~vivvqVH~r~~yl~~li~sL~~~~~I~~-~llifSHd~~~~ein~~v~ 80 (356)
T PF05060_consen 30 NDSIVIVVQVHNRPEYLKLLIDSLSQARGIEE-ALLIFSHDFYSEEINDLVQ 80 (356)
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHHHhhCccc-eEEEEeccCChHHHHHHHH
Confidence 36799999999999999999999997765533 4444776766666666666
No 123
>COG1512 Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
Probab=29.99 E-value=3.3e+02 Score=26.44 Aligned_cols=46 Identities=9% Similarity=0.211 Sum_probs=35.1
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHh
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWA 141 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~ 141 (513)
+|...+++.++.+.+++. .++.|++++...|+|+|.-..++.++|.
T Consensus 46 ~e~~~Leq~l~~L~~kt~--~QiaVv~vpSt~g~~IE~ya~rlfd~W~ 91 (271)
T COG1512 46 AERGALEQQLADLEQKTG--AQIAVVTVPSTGGETIEQYATRLFDKWK 91 (271)
T ss_pred hhHHHHHHHHHHHHhccC--CeEEEEEecCCCCCCHHHHHHHHHHhcC
Confidence 456789999999987764 4566767777778899988888877753
No 124
>COG3181 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=29.99 E-value=2e+02 Score=28.61 Aligned_cols=28 Identities=7% Similarity=0.054 Sum_probs=19.7
Q ss_pred eEEEEEecCCCh--HHHHHHHHHHHcCCCC
Q 040333 85 VVLIQIPMFNEK--EVYKISIGAACGLSWP 112 (513)
Q Consensus 85 ~VsIiIP~yNE~--~~l~~~l~sl~~q~yp 112 (513)
++++|+|.--.. +.+.|++...+..++.
T Consensus 29 ~it~Ivp~~~GGg~D~~aR~~~~~l~k~lg 58 (319)
T COG3181 29 PITIIVPAAAGGGTDQTARALAESLSKELG 58 (319)
T ss_pred CeEEEEecCCCChHHHHHHHHHHHHHHHhC
Confidence 488888876554 7888888777755544
No 125
>PF10138 vWA-TerF-like: vWA found in TerF C terminus ; InterPro: IPR019303 This entry represents the N-terminal domain of a family of proteins that confer resistance to the metalloid element tellurium and its salts.
Probab=28.91 E-value=3.5e+02 Score=24.99 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=23.6
Q ss_pred CCChHHHHHHHHHHH---cCCCCCCceEEEEEcCCCcHH
Q 040333 93 FNEKEVYKISIGAAC---GLSWPSDRLVIQVLDDSTDPA 128 (513)
Q Consensus 93 yNE~~~l~~~l~sl~---~q~yp~~~~~I~V~DdstD~t 128 (513)
=||..++++.++... ..+.| .+++++.||..++.
T Consensus 83 t~y~~vm~~v~~~y~~~~~~~~P--~~VlFiTDG~~~~~ 119 (200)
T PF10138_consen 83 TNYAPVMEDVLDHYFKREPSDAP--ALVLFITDGGPDDR 119 (200)
T ss_pred cchHHHHHHHHHHHhhcCCCCCC--eEEEEEecCCccch
Confidence 356688888888887 34456 36777889866544
No 126
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=28.64 E-value=5e+02 Score=24.41 Aligned_cols=38 Identities=13% Similarity=0.225 Sum_probs=23.9
Q ss_pred CeEEEEEecCCCh---HHHHHHHHHHHcCCCCCCceEEEEEcCC
Q 040333 84 PVVLIQIPMFNEK---EVYKISIGAACGLSWPSDRLVIQVLDDS 124 (513)
Q Consensus 84 P~VsIiIP~yNE~---~~l~~~l~sl~~q~yp~~~~~I~V~Dds 124 (513)
|.+-+|-|+|... ..+.+.-..+.-. |+...+| |-|+.
T Consensus 1 p~i~vVTPTy~R~~Q~~~LtRLa~TL~lV--p~l~WIV-VEd~~ 41 (223)
T cd00218 1 PTIYVVTPTYARPVQKAELTRLAHTLRLV--PPLHWIV-VEDSE 41 (223)
T ss_pred CeEEEECCCCccchhhHHHHHHHHHHhcC--CceEEEE-EeCCC
Confidence 5688999999987 4666666666544 3344433 44543
No 127
>PF14979 TMEM52: Transmembrane 52
Probab=27.97 E-value=2.2e+02 Score=24.63 Aligned_cols=33 Identities=3% Similarity=0.130 Sum_probs=24.5
Q ss_pred CCCeEEEEEecCCChHHHHHHHHHHHcCCCCCC
Q 040333 82 NFPVVLIQIPMFNEKEVYKISIGAACGLSWPSD 114 (513)
Q Consensus 82 ~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~ 114 (513)
..++..+-|-+.+.+..+..|+.|+.+..||..
T Consensus 60 ~~~P~~~TVia~D~DSt~hsTvTS~sSVq~P~~ 92 (154)
T PF14979_consen 60 APQPYEVTVIAVDSDSTLHSTVTSYSSVQYPAG 92 (154)
T ss_pred CCCCceEEEEeccCCccccchhhhhhccccccc
Confidence 345555555566777789999999999999964
No 128
>PRK00317 mobA molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed
Probab=25.84 E-value=3.8e+02 Score=23.99 Aligned_cols=78 Identities=17% Similarity=0.151 Sum_probs=43.4
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCC-CCCchhHHHHHhhhcc-
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENR-TGYKAGALKEGLKRSY- 171 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~-~g~Ka~aln~gl~~a~- 171 (513)
+....++.+++.+. +..+-+++|.++. . +... . ..++++..... ..|-..++..|++...
T Consensus 28 ~g~~ll~~~i~~l~----~~~~~i~vv~~~~-~---~~~~--------~--~~~~~v~~~~~~~~g~~~~i~~~l~~~~~ 89 (193)
T PRK00317 28 NGKPLIQHVIERLA----PQVDEIVINANRN-L---ARYA--------A--FGLPVIPDSLADFPGPLAGILAGLKQART 89 (193)
T ss_pred CCEEHHHHHHHHHh----hhCCEEEEECCCC-h---HHHH--------h--cCCcEEeCCCCCCCCCHHHHHHHHHhcCC
Confidence 56788999999886 2222223243321 1 1111 1 12334432222 2345667777777542
Q ss_pred ----cccCCh----HHHHHHHHHHhh
Q 040333 172 ----VKHCEY----PDYLRRAIPYLV 189 (513)
Q Consensus 172 ----v~DaD~----pd~L~~lv~~~~ 189 (513)
+.+||. ++.+++++..+.
T Consensus 90 ~~vlv~~~D~P~i~~~~i~~l~~~~~ 115 (193)
T PRK00317 90 EWVLVVPCDTPFIPPDLVARLAQAAG 115 (193)
T ss_pred CeEEEEcCCcCCCCHHHHHHHHHhhh
Confidence 468888 899999988763
No 129
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]
Probab=24.64 E-value=1.2e+03 Score=28.28 Aligned_cols=153 Identities=12% Similarity=0.044 Sum_probs=76.9
Q ss_pred CchhHHHHHhhhcc-----cccCCh----HHHH--HHHHHHhhcCC----CeEEEeeeEEEecCCCcHHHHHHHhhhhhh
Q 040333 158 YKAGALKEGLKRSY-----VKHCEY----PDYL--RRAIPYLVQNS----DIALVQARWRFVNANECLLTRMQEMSLDYH 222 (513)
Q Consensus 158 ~Ka~aln~gl~~a~-----v~DaD~----pd~L--~~lv~~~~~~~----~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~ 222 (513)
||+.|.|+++-..+ ..|+.- ++++ +.+++.|++.. .+.+++.+-..-.++-+.+....+..-..+
T Consensus 1051 GKpeNQNhaiiFtRGE~iQtIDmNQDnYlEE~lKmRnlL~EF~~~~~g~r~ptIlG~RE~IFt~svssLa~fms~qEqSF 1130 (1679)
T KOG0916|consen 1051 GKPENQNHAIIFTRGEAIQTIDMNQDNYLEEALKMRNLLQEFEELHLGIRPPTILGAREHIFTGSVSSLAWFMSGQEQSF 1130 (1679)
T ss_pred CCCcccCceeeeecchhhheecccchHHHHHHHHHHHHHHHHHhhcCCCCCCceeeehhheecCCchHHHHHHccCccch
Confidence 89999999885542 345544 4433 34566664433 355666554444433333322211100111
Q ss_pred hhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCC----CCccchHHHHHHHHhCCCeEEEeccceecccCCcCHHHH
Q 040333 223 FKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKD----RTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPSTFKAF 298 (513)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~----~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t~~~~ 298 (513)
-...|+.-..-+++-.--|+--++.|-..-.-||-.. -++.||..-++....+|.++..+.-..|-----..+.+-
T Consensus 1131 vTlgqR~LA~p~~vr~HYGHPD~~drif~~TRGGvSKAsk~inlsEDIfAG~n~tlRgG~itH~EYiQvGKGRDvGlnqI 1210 (1679)
T KOG0916|consen 1131 VTLGQRTLANPGGVRLHYGHPDVFDRIFHITRGGVSKASKGINLSEDIFAGFNATLRGGNITHHEYIQVGKGRDVGLNQI 1210 (1679)
T ss_pred hhHHHHHhccccceeeecCCCcHhhhhhhhccccchHhhcccccchHhhhhhhHHhhCCCcccceeeecccccccCcchh
Confidence 1122222222222111125555566644444466543 256999999999999999998777555532222333333
Q ss_pred HHHHHHhhhchh
Q 040333 299 RFQQHRWSCGPA 310 (513)
Q Consensus 299 ~~Qr~RW~~G~~ 310 (513)
..=..+-+.|+-
T Consensus 1211 ~~FeaKia~G~G 1222 (1679)
T KOG0916|consen 1211 SNFEAKIANGNG 1222 (1679)
T ss_pred hhhhhhhcCCCc
Confidence 333444556655
No 130
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=24.63 E-value=1.2e+02 Score=26.10 Aligned_cols=38 Identities=21% Similarity=0.192 Sum_probs=24.3
Q ss_pred CeEEEEEecCCChHHHHHHHHHHH----cCCCCCCceEEEEEcCC
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAAC----GLSWPSDRLVIQVLDDS 124 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~----~q~yp~~~~~I~V~Dds 124 (513)
-+|.|+||-+|.++.+...+..+. +|.- ...|+|+..+
T Consensus 47 ~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~---~y~I~vieQ~ 88 (136)
T PF13733_consen 47 HKVAIIIPYRDREEHLRIFLPHLHPFLQRQQL---DYRIFVIEQV 88 (136)
T ss_dssp -EEEEEEEESS-HHHHHHHHHHHHHHHHHTT----EEEEEEEEE-
T ss_pred cceEEEEEeCCHHHHHHHHHHHHHHHHhhCcc---eEEEEEEeec
Confidence 489999999999987777766542 4542 3556666543
No 131
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=24.13 E-value=1.7e+02 Score=30.28 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=22.0
Q ss_pred CCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcH
Q 040333 93 FNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDP 127 (513)
Q Consensus 93 yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~ 127 (513)
++.++.+.+.|+.+.+ .||+-+.+. |...+..+
T Consensus 69 fGg~~~L~~aI~~~~~-~~p~p~~i~-V~~tc~~~ 101 (415)
T cd01977 69 FGGEKKLKKNIIEAFK-EFPDIKRMT-VYTTCTTA 101 (415)
T ss_pred eccHHHHHHHHHHHHH-hCCCCcEEE-EECCCchh
Confidence 3344799999999887 577556555 55554433
No 132
>PF11181 YflT: Heat induced stress protein YflT
Probab=22.79 E-value=1.7e+02 Score=23.65 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=24.4
Q ss_pred EecCCChHHHHHHHHHHHcCCCCCCceEE
Q 040333 90 IPMFNEKEVYKISIGAACGLSWPSDRLVI 118 (513)
Q Consensus 90 IP~yNE~~~l~~~l~sl~~q~yp~~~~~I 118 (513)
|=+|+..+.+...|+.+.++.|..+++.|
T Consensus 3 Igv~~~~~E~~~~I~~L~~~Gy~~ddI~V 31 (103)
T PF11181_consen 3 IGVYDNEEEALSAIEELKAQGYSEDDIYV 31 (103)
T ss_pred EEEECCHHHHHHHHHHHHHcCCCcccEEE
Confidence 55677777888999999999999988766
No 133
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=21.71 E-value=7.8e+02 Score=24.26 Aligned_cols=32 Identities=13% Similarity=0.070 Sum_probs=25.1
Q ss_pred CCeEEEEEecCCCh--HHHHHHHHHHHcCCCCCC
Q 040333 83 FPVVLIQIPMFNEK--EVYKISIGAACGLSWPSD 114 (513)
Q Consensus 83 ~P~VsIiIP~yNE~--~~l~~~l~sl~~q~yp~~ 114 (513)
-++++|=||+-..+ ..+.+||.|++..--|.+
T Consensus 51 ~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~E 84 (297)
T PF04666_consen 51 GKKLCIGIPTVKREKESYLLDTLASLLDGLSPEE 84 (297)
T ss_pred CCeEEEEecccccCCCchHHHHHHHHHHhCCHHH
Confidence 34599999998766 699999999996655543
No 134
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=21.62 E-value=3e+02 Score=25.05 Aligned_cols=80 Identities=14% Similarity=0.120 Sum_probs=47.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhcc--
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRSY-- 171 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a~-- 171 (513)
+....++.+++.+... ..++.| |. + +.. .... .. ..++.++.......|-..++..|++...
T Consensus 31 ~g~~ll~~~i~~l~~~---~~~ivv-v~-~--~~~--~~~~-----~~--~~~~~~i~~~~~~~G~~~si~~~l~~~~~~ 94 (200)
T PRK02726 31 QGVPLLQRVARIAAAC---ADEVYI-IT-P--WPE--RYQS-----LL--PPGCHWLREPPPSQGPLVAFAQGLPQIKTE 94 (200)
T ss_pred CCEeHHHHHHHHHHhh---CCEEEE-EC-C--CHH--HHHh-----hc--cCCCeEecCCCCCCChHHHHHHHHHhCCCC
Confidence 5577889999988643 133333 33 2 111 1111 11 1245666444444456677888887652
Q ss_pred ---cccCCh----HHHHHHHHHHhh
Q 040333 172 ---VKHCEY----PDYLRRAIPYLV 189 (513)
Q Consensus 172 ---v~DaD~----pd~L~~lv~~~~ 189 (513)
+.+||. ++.++++++...
T Consensus 95 ~vlv~~~D~P~i~~~~i~~l~~~~~ 119 (200)
T PRK02726 95 WVLLLACDLPRLTVDVLQEWLQQLE 119 (200)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHhh
Confidence 568888 899999988773
No 135
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=20.51 E-value=5.1e+02 Score=25.23 Aligned_cols=191 Identities=12% Similarity=0.095 Sum_probs=90.4
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhh
Q 040333 89 QIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLK 168 (513)
Q Consensus 89 iIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~ 168 (513)
++|+|+-+ .+.-+++.+....-. ++.| |.+..+-++.+.+... =...+.+++|...+++.| -++|.-.|-+
T Consensus 25 LlpV~~KP-mi~y~l~~L~~aGI~--dI~I-I~~~~~~~~~~~llGd----gs~~gv~itY~~Q~~p~G-lA~Av~~a~~ 95 (286)
T COG1209 25 LLPVYDKP-MIYYPLETLMLAGIR--DILI-VVGPEDKPTFKELLGD----GSDFGVDITYAVQPEPDG-LAHAVLIAED 95 (286)
T ss_pred cceecCcc-hhHhHHHHHHHcCCc--eEEE-EecCCchhhhhhhhcC----ccccCcceEEEecCCCCc-HHHHHHHHHh
Confidence 47888854 556666666644322 2333 4444333333333221 112377999998776654 6666665544
Q ss_pred hcccccCCh---------HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhccCcccc
Q 040333 169 RSYVKHCEY---------PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATHAFFGF 239 (513)
Q Consensus 169 ~a~v~DaD~---------pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (513)
... |.|+ .+-+.+.+..+.+. +.++.---..+.|+.. ....+++....+.........-..++
T Consensus 96 fv~--~~~f~l~LGDNi~~~~l~~~~~~~~~~-~~ga~i~~~~V~dP~r-----fGV~e~d~~~~v~~l~EKP~~P~SNl 167 (286)
T COG1209 96 FVG--DDDFVLYLGDNIFQDGLSELLEHFAEE-GSGATILLYEVDDPSR-----YGVVEFDEDGKVIGLEEKPKEPKSNL 167 (286)
T ss_pred hcC--CCceEEEecCceeccChHHHHHHHhcc-CCCcEEEEEEcCCccc-----ceEEEEcCCCcEEEeEECCCCCCCce
Confidence 431 2333 44667777766332 2222222222233311 11112220000000000011111111
Q ss_pred -cccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEeccceec--ccCCcCHH
Q 040333 240 -NGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYLGDLQVK--SELPSTFK 296 (513)
Q Consensus 240 -~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~~~~~~--~~~p~t~~ 296 (513)
.-+..+++.++++.+-...+..- .|=.|.-..+..+|.++....---.| +-.|+++-
T Consensus 168 AvtGlY~~d~~Vf~~~~~ikPS~RGElEITd~i~~~i~~G~~~~~~~~~G~WlDtGt~~sll 229 (286)
T COG1209 168 AVTGLYFYDPSVFEAIKQIKPSARGELEITDAIDLYIEKGYLVVAILIRGWWLDTGTPESLL 229 (286)
T ss_pred eEEEEEEeChHHHHHHHcCCCCCCCceEehHHHHHHHHcCcEEEEEEccceEEecCChhhHH
Confidence 12445788888888755433322 45566777788899888766543333 33455554
Done!