Query 040333
Match_columns 513
No_of_seqs 449 out of 3726
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 11:44:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 9.3E-39 3.2E-43 354.7 38.4 342 80-434 136-510 (802)
2 3bcv_A Putative glycosyltransf 99.9 4.8E-24 1.7E-28 203.0 12.3 197 83-288 4-223 (240)
3 1qg8_A Protein (spore coat pol 99.9 8.1E-24 2.8E-28 203.4 6.1 208 84-309 1-236 (255)
4 1xhb_A Polypeptide N-acetylgal 99.9 3.7E-22 1.3E-26 209.6 15.9 230 80-316 25-297 (472)
5 2z86_A Chondroitin synthase; G 99.9 1.1E-21 3.7E-26 213.3 18.7 210 82-298 91-338 (625)
6 2d7i_A Polypeptide N-acetylgal 99.9 8.6E-22 3E-26 211.0 12.4 228 81-314 109-373 (570)
7 2z86_A Chondroitin synthase; G 99.8 3.7E-21 1.3E-25 209.1 12.5 210 81-308 372-593 (625)
8 2ffu_A Ppgalnact-2, polypeptid 99.8 3.3E-21 1.1E-25 203.8 11.4 201 80-290 62-290 (501)
9 4fix_A UDP-galactofuranosyl tr 99.8 1.4E-20 4.6E-25 203.5 10.3 205 81-292 177-419 (657)
10 3ckj_A Putative uncharacterize 99.8 2.8E-19 9.6E-24 178.6 14.7 198 81-289 45-263 (329)
11 3l7i_A Teichoic acid biosynthe 99.7 1.3E-19 4.4E-24 200.1 0.0 193 83-288 1-204 (729)
12 3f1y_A Mannosyl-3-phosphoglyce 99.7 5.9E-16 2E-20 157.0 15.7 189 82-289 92-308 (387)
13 2fy7_A Beta-1,4-galactosyltran 99.6 6.5E-16 2.2E-20 150.3 4.7 170 83-313 64-263 (287)
14 2nxv_A ATP synthase subunits r 99.5 9.3E-15 3.2E-19 139.8 4.8 173 81-291 13-204 (249)
15 2bo4_A Mannosylglycerate synth 99.4 3.3E-12 1.1E-16 129.2 12.4 186 88-285 4-212 (397)
16 2wvl_A Mannosyl-3-phosphoglyce 98.8 2.2E-08 7.5E-13 96.9 11.8 112 83-202 52-202 (391)
17 2zu9_A Mannosyl-3-phosphoglyce 98.6 2.3E-07 8E-12 92.4 10.7 95 84-188 51-184 (394)
18 1fo8_A Alpha-1,3-mannosyl-glyc 98.1 9.5E-06 3.2E-10 80.1 9.3 109 84-200 2-139 (343)
19 3lw6_A FI08434P, beta-4-galact 97.0 0.00055 1.9E-08 64.3 4.8 76 238-313 157-250 (287)
20 2c0n_A A197; thermophil protei 57.3 3.5 0.00012 36.4 1.3 41 239-279 116-165 (203)
21 2d0j_A Galactosylgalactosylxyl 43.2 1.7E+02 0.0059 26.6 10.2 38 83-123 2-42 (246)
22 3cu0_A Galactosylgalactosylxyl 40.0 1.4E+02 0.0049 27.7 9.2 40 80-122 17-59 (281)
23 2waw_A MOBA relate protein; un 35.7 1.8E+02 0.0061 24.6 9.2 81 94-187 29-120 (199)
24 2wee_A MOBA-related protein; u 33.6 1.4E+02 0.0046 25.4 8.0 81 94-187 29-120 (197)
25 3ngw_A Molybdopterin-guanine d 31.3 1.2E+02 0.0042 26.5 7.3 79 94-189 24-109 (208)
26 1omz_A Alpha-1,4-N-acetylhexos 30.8 1.6E+02 0.0054 27.6 8.1 105 83-200 27-142 (293)
27 3tqd_A 3-deoxy-manno-octuloson 30.2 2.2E+02 0.0074 25.9 9.1 43 240-283 190-234 (256)
28 3st8_A Bifunctional protein GL 30.2 1.7E+02 0.0057 29.6 9.1 92 89-189 34-137 (501)
29 4fcu_A 3-deoxy-manno-octuloson 26.8 2.4E+02 0.0083 25.5 8.7 43 240-283 182-226 (253)
30 1v84_A Galactosylgalactosylxyl 26.7 1.8E+02 0.006 26.6 7.5 45 83-130 2-51 (253)
31 1ezi_A CMP-N-acetylneuraminic 20.6 2E+02 0.0069 25.1 6.8 81 94-188 27-122 (228)
32 3k8d_A 3-deoxy-manno-octuloson 20.5 3.6E+02 0.012 24.5 8.6 43 239-282 196-240 (264)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=9.3e-39 Score=354.69 Aligned_cols=342 Identities=23% Similarity=0.321 Sum_probs=233.5
Q ss_pred CCCCCeEEEEEecCCChHH-HHHHHHHHHcCCCCCCceEEEEEcC-CCcHHHHH----HHHH------HHHHHhhcCCcE
Q 040333 80 SSNFPVVLIQIPMFNEKEV-YKISIGAACGLSWPSDRLVIQVLDD-STDPAIKQ----MVEQ------ECQRWAAKGINI 147 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~~-l~~~l~sl~~q~yp~~~~~I~V~Dd-stD~t~~~----l~~~------~~~~~~~~~~~i 147 (513)
+++.|+|||+||+|||++. +++||+|+++|+||+++++|+|+|| |+|+|.+. ..++ ..+++.+ ..++
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~-~~~v 214 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCR-ELGV 214 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHH-HHTC
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHH-hcCc
Confidence 5678999999999999965 5999999999999987666666655 88888421 1111 1111211 2367
Q ss_pred EEEEecCCCCCchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHh--
Q 040333 148 RYQIRENRTGYKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEM-- 217 (513)
Q Consensus 148 ~~i~~~~~~g~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~-- 217 (513)
+++.++++++||++|+|.|++.+. ++|+|. ||+++++++.+++||++++|+++....|.+. ........
T Consensus 215 ~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~-~~~~~~~~~~ 293 (802)
T 4hg6_A 215 VYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDP-IQRNLALGDR 293 (802)
T ss_dssp EEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCH-HHHHHTCCTT
T ss_pred EEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCch-HhhhhhHHhh
Confidence 888888887899999999999985 479999 9999999999988999999999988877541 11111100
Q ss_pred ---hhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHhCCCeEEEeccceecccCCcC
Q 040333 218 ---SLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDLQVKSELPST 294 (513)
Q Consensus 218 ---~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~p~t 294 (513)
+....+...+......+. ..++|+++++||++++++|||+++.++||.+++.|+.++||++.|+|++.++++.|.|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~Rr~al~~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~p~t 372 (802)
T 4hg6_A 294 CPPENEMFYGKIHRGLDRWGG-AFFCGSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYIDRAMIAGLQPET 372 (802)
T ss_dssp SCCTTHHHHHTHHHHHHHTTC-CCCCSSSEEEEHHHHHHHTTCCCSSSSHHHHHHHHHHTTTCCEEECCCCCEEECCCCS
T ss_pred hhHHHHHHHHHHHhhHhhcCC-ceecccchhhhHHHHHHcCCcCCCCcchHHHHHHHHHHcCCeEEEecCCEEEecCCCC
Confidence 011112222222222222 2367999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhchhHHHHHhhHhHhhcCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhc---C--Cchh
Q 040333 295 FKAFRFQQHRWSCGPANLFRKMVMEIIRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFSFYCVVLPLTILV---P--EVQV 369 (513)
Q Consensus 295 ~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~~l~---~--~~~~ 369 (513)
++++.+||.||.+|..|.++++ ..+..++++..+++.++.++..... ++..++ .+++|+.+++ . ....
T Consensus 373 ~~~~~~Qr~RW~~G~~q~l~~~--~pl~~~~l~~~~rl~~l~~~~~~~~---~~~~li--~ll~p~~~ll~~~~~~~~~~ 445 (802)
T 4hg6_A 373 FASFIQQRGRWATGMMQMLLLK--NPLFRRGLGIAQRLCYLNSMSFWFF---PLVRMM--FLVAPLIYLFFGIEIFVATF 445 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS--CTTSCSSCCHHHHHHHHHHHHHTTH---HHHHHH--HHHHHHHHHHHCCCCSCCCH
T ss_pred HHHHHHHHHHHHccHHHHHHHh--CccccCCCCHHHHHHHHHHHHHHHH---HHHHHH--HHHHHHHHHHHhHHHhhcCH
Confidence 9999999999999999998865 3344567888888876654332111 111111 1122322211 1 1112
Q ss_pred hHHHHHHHHHHHHH---HHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeccccC
Q 040333 370 PIWGAVYIPSIITI---LNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEAGRANEWVVTEKLG 434 (513)
Q Consensus 370 ~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~~~a~~~gl~~~g~~~~w~~T~k~~ 434 (513)
..+...++|.++.. ...+....... ....+++.+++++.+.+++.++++ .++.+|.+|+|.+
T Consensus 446 ~~~~~~~lp~~l~~~~~~~~~~~~~r~~--~~~~l~~~~~~~~~~~a~l~~l~~-~~~~~f~VT~Kg~ 510 (802)
T 4hg6_A 446 EEVLAYMPGYLAVSFLVQNALFARQRWP--LVSEVYEVAQAPYLARAIVTTLLR-PRSARFAVTAKDE 510 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSCT--THHHHHHHHHHHHHHHHHHHHHHS-TTCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcHHH--HHHHHHHHHHHHHHHHHHHHHHhC-CCCCcceECCCCc
Confidence 22333334433321 12222222111 122466677888889999999995 2556999999944
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.90 E-value=4.8e-24 Score=202.99 Aligned_cols=197 Identities=12% Similarity=0.092 Sum_probs=130.2
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhH
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGA 162 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~a 162 (513)
.|+|||+||+||+++.+++||+|+++|+||+.|++| |+|+|+|+|.+. +++ +..+++++++++ . ++.|++.|
T Consensus 4 ~p~vsViIp~yn~~~~l~~~l~Sl~~q~~~~~eiIv-vDd~S~d~t~~~-~~~----~~~~~~~i~~i~-~-~n~G~~~a 75 (240)
T 3bcv_A 4 IPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIIL-IDDESPDNCPKI-CDD----YAAQYPNIKVIH-K-KNAGLGMA 75 (240)
T ss_dssp CCSEEEEEEESSCTTTHHHHHHHHHTCSSSSEEEEE-EECCCSSSHHHH-HHH----HHHHCSSEEEEE-C-CCCCHHHH
T ss_pred CCcEEEEEecCCCHHHHHHHHHHHHhCcCCCeEEEE-EECCCCcCHHHH-HHH----HHhhCCCEEEEE-C-CCCChHHH
Confidence 589999999999999999999999999999766554 777799999774 443 334467899885 3 46779999
Q ss_pred HHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhh-hhhhhH---HHHhh
Q 040333 163 LKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSL-DYHFKV---EQEVG 230 (513)
Q Consensus 163 ln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~-~~~~~~---~~~~~ 230 (513)
+|.|++.|. ++|+|. |++|+++++.+.+ ++.+++.+.....+.+............ ...+.. .....
T Consensus 76 ~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (240)
T 3bcv_A 76 CNSGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQK-YTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLK 154 (240)
T ss_dssp HHHHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHH-HTCSEEEC--------------------CEEECSHHHHHHHHG
T ss_pred HHHHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHh-cCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHH
Confidence 999999985 468888 9999999999954 3555565554433322210001100000 000000 00000
Q ss_pred hhccC--------cccccccchHhhHHHHHHhC-CcCCC--CccchHHHHHHHHhCCCeEEEeccceec
Q 040333 231 SATHA--------FFGFNGTAGVWRIAAINEAG-GWKDR--TTVEDMDLAVRASLKGWKFVYLGDLQVK 288 (513)
Q Consensus 231 ~~~~~--------~~~~~G~~~~~Rr~~l~~~G-g~~~~--~~~ED~~l~~rl~~~G~ki~~~~~~~~~ 288 (513)
...+. ....+|+++++||++++++| ||++. ...||.+++.|+.++|+++.++|++..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~ 223 (240)
T 3bcv_A 155 DLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYN 223 (240)
T ss_dssp GGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-----
T ss_pred HHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEE
Confidence 01010 11235788999999999999 99987 3589999999999999999999998665
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.88 E-value=8.1e-24 Score=203.44 Aligned_cols=208 Identities=12% Similarity=0.145 Sum_probs=144.7
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecC-------CC
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIREN-------RT 156 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~-------~~ 156 (513)
|+|||+||+||+++.+++||+|+++|+||+.+++| |+|+|+|+|.+.+.+ +.. +.++++++.+. .+
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~~~~eiiv-vDd~S~d~t~~~~~~-----~~~-~~~i~~i~~~~~~~~~~~~n 73 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFI-MDDNSNEETLNVIRP-----FLN-DNRVRFYQSDISGVKERTEK 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEE-EECSCCHHHHHHHGG-----GGG-STTEEEEECCCCSHHHHHSS
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccCCceEEEE-EECCCCchHHHHHHH-----Hhh-cCCEEEEecccccccccccc
Confidence 78999999999999999999999999999766554 777799998774333 433 67899986551 35
Q ss_pred CCchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEe--cCCCcHHHHHHHhhhhhhhhHH
Q 040333 157 GYKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFV--NANECLLTRMQEMSLDYHFKVE 226 (513)
Q Consensus 157 g~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~--n~~~~~~~~~~~~~~~~~~~~~ 226 (513)
.|++.|+|.|++.|. ++|+|. |++|++++..+.++|++++|++..... +.+....... ... ..
T Consensus 74 ~G~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~----~~~-~~-- 146 (255)
T 1qg8_A 74 TRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKET----VRP-AA-- 146 (255)
T ss_dssp CHHHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEE----EEC-CC--
T ss_pred cCHHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhc----cCc-hH--
Confidence 679999999999985 468888 999999999997789999999988765 4432211000 000 00
Q ss_pred HHhhhhccCcccccccchHhhHHHHHHhC-Cc------CCC-CccchHHHHHHHHhCCCeEEEeccceeccc-CCcCHHH
Q 040333 227 QEVGSATHAFFGFNGTAGVWRIAAINEAG-GW------KDR-TTVEDMDLAVRASLKGWKFVYLGDLQVKSE-LPSTFKA 297 (513)
Q Consensus 227 ~~~~~~~~~~~~~~G~~~~~Rr~~l~~~G-g~------~~~-~~~ED~~l~~rl~~~G~ki~~~~~~~~~~~-~p~t~~~ 297 (513)
...........|+++++||++++++| +| ++. ...||.+++.|+.++| ++.++|++.+... .+.+...
T Consensus 147 ---~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~~~s~s~ 222 (255)
T 1qg8_A 147 ---QVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNYITDQSIHF 222 (255)
T ss_dssp ---SCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC------
T ss_pred ---HHHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEEEcCCccch
Confidence 00001223356899999999999999 78 333 3489999999999987 7999999887643 3444443
Q ss_pred --HHHHHHHhhhch
Q 040333 298 --FRFQQHRWSCGP 309 (513)
Q Consensus 298 --~~~Qr~RW~~G~ 309 (513)
..+|+.+|.+..
T Consensus 223 ~~~~~~~~~~~~~~ 236 (255)
T 1qg8_A 223 QLFELEKNEFVRNL 236 (255)
T ss_dssp --------CTGGGS
T ss_pred hHHHHHHHHHHHhc
Confidence 345566666553
No 4
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.88 E-value=3.7e-22 Score=209.62 Aligned_cols=230 Identities=13% Similarity=0.053 Sum_probs=156.1
Q ss_pred CCCCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEE-EEcCCCcH-HHHHHHHHHHHHHhhcCC-cEEEEEecCC
Q 040333 80 SSNFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQ-VLDDSTDP-AIKQMVEQECQRWAAKGI-NIRYQIRENR 155 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~-t~~~l~~~~~~~~~~~~~-~i~~i~~~~~ 155 (513)
+++.|.||||||+|||+ +.+.++|+|+++|+||+...+|+ |+|+|+|+ |.+ .++++. ++.+ ++++++.+ .
T Consensus 25 ~~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~-~l~~~~----~~~~~~v~vi~~~-~ 98 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKR-PLESYV----KKLKVPVHVIRME-Q 98 (472)
T ss_dssp CSCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTH-HHHHHH----HSSSSCEEEEECS-S
T ss_pred CcCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHH-HHHHHH----HHCCCcEEEEECC-C
Confidence 35679999999999999 99999999999999997533444 55668885 655 444433 3445 79998655 4
Q ss_pred CCCchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHH---HHHHhhh--hhh
Q 040333 156 TGYKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLT---RMQEMSL--DYH 222 (513)
Q Consensus 156 ~g~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~---~~~~~~~--~~~ 222 (513)
+.|+++|+|.|++.|. ++|+|. |++|+++++.+.++++.+++ +.....+.+..... ......+ ...
T Consensus 99 n~G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (472)
T 1xhb_A 99 RSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVC-PIIDVISDDTFEYMAGSDMTYGGFNWKLN 177 (472)
T ss_dssp CCCHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEE-EEEEEECSSSCCEECCCTTEEEEECTTCC
T ss_pred CCChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEE-eeeeeEcCCCceeccCCCcccceeeccce
Confidence 4569999999999985 479998 99999999999777776544 44444433211000 0000000 000
Q ss_pred -----h-hHHHHhhh----hccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccceecc
Q 040333 223 -----F-KVEQEVGS----ATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQVKS 289 (513)
Q Consensus 223 -----~-~~~~~~~~----~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~ 289 (513)
. ........ .......+.|+++++||++++++|||++... +||.|+++|+.+.|+++.++|++.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H 257 (472)
T 1xhb_A 178 FRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGH 257 (472)
T ss_dssp EEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred eecccCCHHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEE
Confidence 0 00000000 0111223568999999999999999998765 799999999999999999999999876
Q ss_pred cCCcC-------------HHHHHHHHHHhhhchhHHHHHh
Q 040333 290 ELPST-------------FKAFRFQQHRWSCGPANLFRKM 316 (513)
Q Consensus 290 ~~p~t-------------~~~~~~Qr~RW~~G~~~~~~~~ 316 (513)
....+ .+...+...+|..+..+.+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~ 297 (472)
T 1xhb_A 258 VFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYII 297 (472)
T ss_dssp EC------------CHHHHHHHHHHHHHHCGGGGHHHHHT
T ss_pred EccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 54332 2345556678888877766543
No 5
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.87 E-value=1.1e-21 Score=213.29 Aligned_cols=210 Identities=17% Similarity=0.249 Sum_probs=150.5
Q ss_pred CCCeEEEEEecCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCch
Q 040333 82 NFPVVLIQIPMFNEKEVYKISIGAACGLSWPS-DRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKA 160 (513)
Q Consensus 82 ~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~-~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka 160 (513)
..|.|||+||+|||++.+.++|+|+.+|++|. .+++| |+|+|+|+|.+. +++ + ....+++++..++.+.|++
T Consensus 91 ~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiiv-vDd~s~d~t~~~-~~~----~-~~~~~i~~i~~~~~~~g~~ 163 (625)
T 2z86_A 91 IIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIV-ADDGSKENIEEI-VRE----F-ESLLNIKYVRQKDYGYQLC 163 (625)
T ss_dssp CCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEE-EEESCSSCHHHH-HHT----T-TTTSCEEEEEECCCSCCHH
T ss_pred cCCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEE-EeCCCchhHHHH-HHH----h-hhcCCeEEEEeCCCCcchh
Confidence 45899999999999999999999999998873 34333 667789988764 332 2 2235788887776666799
Q ss_pred hHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhh----------
Q 040333 161 GALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYH---------- 222 (513)
Q Consensus 161 ~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~---------- 222 (513)
+|+|.|++.+. ++|+|. |++|++++..+.++++++++++.....+.+...............
T Consensus 164 ~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (625)
T 2z86_A 164 AVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQV 243 (625)
T ss_dssp HHHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC-------
T ss_pred HHHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCch
Confidence 99999999985 479999 999999999997788998888877655543322222111000000
Q ss_pred -----------hhHHH--H---hhhhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEec
Q 040333 223 -----------FKVEQ--E---VGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLG 283 (513)
Q Consensus 223 -----------~~~~~--~---~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~ 283 (513)
+.... . ..........+.|+++++||++++++|||++... +||.|++.|+.++|+++.++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 244 AGKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp --------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred hhhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcc
Confidence 00000 0 0011111223679999999999999999998764 699999999999999999999
Q ss_pred cceecccCCcCHHHH
Q 040333 284 DLQVKSELPSTFKAF 298 (513)
Q Consensus 284 ~~~~~~~~p~t~~~~ 298 (513)
++.+++..|.+....
T Consensus 324 ~~~v~H~~~~~~~~~ 338 (625)
T 2z86_A 324 GAMAYHQEPPGKENE 338 (625)
T ss_dssp GGCEEEECCC-----
T ss_pred cchhhccCCccccch
Confidence 999999887765433
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.86 E-value=8.6e-22 Score=211.04 Aligned_cols=228 Identities=14% Similarity=0.109 Sum_probs=156.4
Q ss_pred CCCCeEEEEEecCCCh-HHHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 81 SNFPVVLIQIPMFNEK-EVYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~-~~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
+..|+||||||+|||+ +.+.++|+|+++|+||+...+|+ |+|+|+|+|....+++ +..+.+++++++.+ ++.|
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~----~~~~~~~v~vi~~~-~n~G 183 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLED----YMALFPSVRILRTK-KREG 183 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHH----HHTTSTTEEEEECS-SCCC
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHH----HHHhCCeEEEEECC-CCCC
Confidence 4579999999999999 99999999999999987533333 6667999993334444 33445789998554 4566
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHH--H--Hhhhh--hhhh
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRM--Q--EMSLD--YHFK 224 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~--~--~~~~~--~~~~ 224 (513)
++.|+|.|++.|. ++|+|. |++|++++..+.+++++ +|++.....+.+....... . ...+. ..+.
T Consensus 184 ~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (570)
T 2d7i_A 184 LIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYK 262 (570)
T ss_dssp HHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCccccccccccccc
Confidence 9999999999985 479999 99999999999777655 5666665554422100000 0 00000 0000
Q ss_pred ---HHH--Hhh--hhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccceecccC---
Q 040333 225 ---VEQ--EVG--SATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQVKSEL--- 291 (513)
Q Consensus 225 ---~~~--~~~--~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~~--- 291 (513)
... ... ........+.|+++++||++++++|||++... .||.|+++|+.+.|+++.++|.+.+.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~ 342 (570)
T 2d7i_A 263 RIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKY 342 (570)
T ss_dssp EECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSS
T ss_pred ccccchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcccc
Confidence 000 000 00111223569999999999999999998754 79999999999999999999999987641
Q ss_pred -CcC-------HHHHHHHHHHhhhchhHHHH
Q 040333 292 -PST-------FKAFRFQQHRWSCGPANLFR 314 (513)
Q Consensus 292 -p~t-------~~~~~~Qr~RW~~G~~~~~~ 314 (513)
|.+ .+...+-..+|.....+.+.
T Consensus 343 ~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~y 373 (570)
T 2d7i_A 343 VPYKVPAGVSLARNLKRVAEVWMDEYAEYIY 373 (570)
T ss_dssp CCSCCCSSCCHHHHHHHHHHHHCGGGHHHHH
T ss_pred CCCCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 211 34455566778877665543
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.84 E-value=3.7e-21 Score=209.07 Aligned_cols=210 Identities=16% Similarity=0.176 Sum_probs=155.0
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCch
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKA 160 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka 160 (513)
...|.|||+||+||+++.+++||+|+++|+|++.+++| |+|+|+|+|.+.+.+ +..+++++++++ +++.|++
T Consensus 372 ~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~~~~eiiv-vdd~S~d~t~~~~~~-----~~~~~~~i~~~~--~~n~G~~ 443 (625)
T 2z86_A 372 KRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCI-CDDGSTDDTLRILQE-----HYANHPRVRFIS--QKNKGIG 443 (625)
T ss_dssp CSSCSEEEEEEESSCTTTHHHHHHHHHSSSCCSEEEEE-EEESCSSSHHHHHHH-----HHTTCTTEEEEE--ECCCCHH
T ss_pred ccCCeEEEEEeCCCCHHHHHHHHHHHHhCcCCCeEEEE-EECcCChhHHHHHHH-----HHhhCCcEEEEe--CCCCCHH
Confidence 34689999999999999999999999999999877655 788899999875433 334567898885 3566799
Q ss_pred hHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhh
Q 040333 161 GALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSA 232 (513)
Q Consensus 161 ~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (513)
+|+|.|++.|. ++|+|. |++|++++..+.++|++++|++.....+.+........ ... .+.... .
T Consensus 444 ~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~-~~~~~~----~ 516 (625)
T 2z86_A 444 SASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGY--NWP-IYSREK----L 516 (625)
T ss_dssp HHHHHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECC--CCS-SCCHHH----H
T ss_pred HHHHHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCc--ccc-cCCHHH----H
Confidence 99999999984 478888 99999999999888999999998776665443211100 000 011100 0
Q ss_pred ccCcccccccchHhhHHHHHHhCCcCCCC-ccchHHHHHHHHhCCCeEEEeccceec---ccCCcCHHHHHHHHHHhhhc
Q 040333 233 THAFFGFNGTAGVWRIAAINEAGGWKDRT-TVEDMDLAVRASLKGWKFVYLGDLQVK---SELPSTFKAFRFQQHRWSCG 308 (513)
Q Consensus 233 ~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~-~~ED~~l~~rl~~~G~ki~~~~~~~~~---~~~p~t~~~~~~Qr~RW~~G 308 (513)
.. ..+.|+++++||++++++|||++.. .+||.|++.|+.+.| ++.++|++.+. +....+.+...+|+.+|.+.
T Consensus 517 ~~--~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~~s~~~~~~~~~~~~~~ 593 (625)
T 2z86_A 517 TS--AMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENHFKV 593 (625)
T ss_dssp TT--SCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC----CCSSHHHHHHHHHHH
T ss_pred hh--cccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCccchhhHHHHHHHHHHH
Confidence 11 1246888999999999999999874 489999999999999 99999998875 33444555555666655444
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.84 E-value=3.3e-21 Score=203.81 Aligned_cols=201 Identities=13% Similarity=0.079 Sum_probs=142.0
Q ss_pred CCCCCeEEEEEecCCChH-HHHHHHHHHHcCCCCCCceEEE-EEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCC
Q 040333 80 SSNFPVVLIQIPMFNEKE-VYKISIGAACGLSWPSDRLVIQ-VLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTG 157 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~~-~l~~~l~sl~~q~yp~~~~~I~-V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g 157 (513)
+++.|.||||||+|||++ .+.++|+|+++|+||+...+|+ |+|+|+|+|.+... ++.+++++++.+ ++.
T Consensus 62 ~~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~--------~~~~~v~vi~~~-~n~ 132 (501)
T 2ffu_A 62 RVDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALL--------GKIEKVRVLRND-RRE 132 (501)
T ss_dssp CSSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGG--------GGBTTEEEEECS-SCC
T ss_pred CcCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHH--------hcCCCEEEEECC-CCc
Confidence 356899999999999997 9999999999999987533343 55669999865332 335689998554 456
Q ss_pred CchhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHH-HH----HHhhhhh---
Q 040333 158 YKAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLT-RM----QEMSLDY--- 221 (513)
Q Consensus 158 ~Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~-~~----~~~~~~~--- 221 (513)
|++.|+|.|++.|. ++|+|. |++|++++..+.+++. ++|++.....+.+.-... .. ..+....
T Consensus 133 G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (501)
T 2ffu_A 133 GLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRT-RVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFK 211 (501)
T ss_dssp HHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTT-EEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEE
T ss_pred CHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCC-eEEEeeeccCcCCCceeecCCcccceEeeecCCCc
Confidence 69999999999995 479998 9999999999966654 577776655543220000 00 0000000
Q ss_pred ---hhhHHHHhh--hh--ccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccceeccc
Q 040333 222 ---HFKVEQEVG--SA--THAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDLQVKSE 290 (513)
Q Consensus 222 ---~~~~~~~~~--~~--~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~~~~~~ 290 (513)
........+ .. ......+.|+++++||++++++|||++... +||.|+++|+.+.|+++.++|++.+.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~ 290 (501)
T 2ffu_A 212 WDYMTPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHV 290 (501)
T ss_dssp EEECCHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEEC
T ss_pred cccCCHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEE
Confidence 000000000 00 011123568999999999999999998754 8999999999999999999999988765
No 9
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.82 E-value=1.4e-20 Score=203.54 Aligned_cols=205 Identities=11% Similarity=0.033 Sum_probs=140.4
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCC---CCCceEEEEEcCCCcHH-HHHHHHHHHHHHhhcCCcEEEEEecCCC
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSW---PSDRLVIQVLDDSTDPA-IKQMVEQECQRWAAKGINIRYQIRENRT 156 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~y---p~~~~~I~V~DdstD~t-~~~l~~~~~~~~~~~~~~i~~i~~~~~~ 156 (513)
...|+|||+||+||+++.+.+||+|+.+|+| +.++++| |+|+|+|++ .....+. .+ ..+.+++++..+ |
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIV-VDNgStD~s~~~~~~e~-~~---~~~~~I~vI~~~--N 249 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIV-PDQGERKVRDHPDFPAA-AA---RLGSRLSIHDQP--N 249 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEE-EECSSSCGGGSTTHHHH-HH---HHGGGEEEEECC--C
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEE-EECcCCCccchHHHHHH-HH---hcCCCEEEEECC--C
Confidence 3458999999999999999999999999998 4334333 566688753 1112221 11 124689998644 6
Q ss_pred CCchhHHHHHhhhc-------c--cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCc------HHHH-----
Q 040333 157 GYKAGALKEGLKRS-------Y--VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANEC------LLTR----- 213 (513)
Q Consensus 157 g~Ka~aln~gl~~a-------~--v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~------~~~~----- 213 (513)
.|.++|.|.|++.| + ++|+|. ||+|++++..+..++++++|++.....+.... ....
T Consensus 250 ~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~ 329 (657)
T 4fix_A 250 LGGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMW 329 (657)
T ss_dssp CHHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccc
Confidence 67899999999887 2 368888 99999999999888899999887664443210 0000
Q ss_pred --HHHhhhhhhh-----h---HHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCc-cchHHHHHHHHhCCCeEEEe
Q 040333 214 --MQEMSLDYHF-----K---VEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT-VEDMDLAVRASLKGWKFVYL 282 (513)
Q Consensus 214 --~~~~~~~~~~-----~---~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~-~ED~~l~~rl~~~G~ki~~~ 282 (513)
.....+...+ . ................|+++++||++++++|++++..+ .||.|++.|+.++|+++.++
T Consensus 330 ~~~~~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~ 409 (657)
T 4fix_A 330 TAAPHAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTL 409 (657)
T ss_dssp EECTTCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEE
Confidence 0000000000 0 00001111122233568999999999999999985433 89999999999999999999
Q ss_pred ccceecccCC
Q 040333 283 GDLQVKSELP 292 (513)
Q Consensus 283 ~~~~~~~~~p 292 (513)
|++.+++...
T Consensus 410 p~a~V~H~~~ 419 (657)
T 4fix_A 410 PGAAIWHMAW 419 (657)
T ss_dssp EEEEEEECCS
T ss_pred CCEEEEEcCc
Confidence 9999998643
No 10
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.80 E-value=2.8e-19 Score=178.59 Aligned_cols=198 Identities=14% Similarity=0.053 Sum_probs=130.9
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHcCCCCC-CceEEEEEcCCCcHHHHHHHHHHHHHHhhc-CCcEEEEEecCCCCC
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACGLSWPS-DRLVIQVLDDSTDPAIKQMVEQECQRWAAK-GINIRYQIRENRTGY 158 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~-~~~~I~V~DdstD~t~~~l~~~~~~~~~~~-~~~i~~i~~~~~~g~ 158 (513)
...|+|||+||+|||++.++++|+|+++|+||. .+++| |+|+|+|+|.+.+.+ +..+ ..+++++...+.+.|
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiiv-VDdgS~D~t~~~~~~-----~~~~~~~~~~~~~~~~~n~G 118 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIV-LDSGSTDDTEIRAVA-----AGARVVSREQALPEVPIRPG 118 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEE-EECSCCSSHHHHHHH-----TTCEEEEHHHHCTTSCCCCS
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEE-EeCCCCchHHHHHHH-----hhhhhccceeeeccCCCCCC
Confidence 345899999999999999999999999999995 45444 777899999875433 2111 011112212456678
Q ss_pred chhHHHHHhhhcc-----cccCCh----HHHHHHHHHHhhcCCCeEEEeeeEEEecC-CC-------cHHHHHHHhhhhh
Q 040333 159 KAGALKEGLKRSY-----VKHCEY----PDYLRRAIPYLVQNSDIALVQARWRFVNA-NE-------CLLTRMQEMSLDY 221 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~----pd~L~~lv~~~~~~~~v~~V~~~~~~~n~-~~-------~~~~~~~~~~~~~ 221 (513)
|+.|+|.|++.+. ++|+|. |++|.+++..+.++|++++|+|....... +. ....+........
T Consensus 119 ~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (329)
T 3ckj_A 119 KGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARP 198 (329)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHH
Confidence 9999999999985 468887 89999999997688999999997654321 10 0011111100000
Q ss_pred hhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHHh-CCCe-EEEeccceecc
Q 040333 222 HFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASL-KGWK-FVYLGDLQVKS 289 (513)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~~-~G~k-i~~~~~~~~~~ 289 (513)
.+ ..............|++.++||++++++| |+++ ..||.++..++.+ .|++ +..++.....+
T Consensus 199 ~~---~~~~~~~~~~~~~~~g~~~~rr~~l~~i~-f~~~-~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h 263 (329)
T 3ckj_A 199 LL---AALRPELGCILQPLGGEYAATRELLTSVP-FAPG-YGVEIGLLVDTFDRLGLDAIAQVNLGVREH 263 (329)
T ss_dssp HH---HHHCGGGGGCSCTTCSCEEEEHHHHTTSC-BCCG-GGHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred HH---HHhhhhhccccCCCccceeeeHHHHHhCC-CCCC-CcccHHHHHHHHHhcCCccEeeecceEEec
Confidence 01 01111112233345777899999999997 7554 5799999999986 6765 77776554444
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.74 E-value=1.3e-19 Score=200.08 Aligned_cols=193 Identities=15% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhH
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGA 162 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~a 162 (513)
.|.|||+||+||+++.+++||+|+++|+||+.|++| |+|+|+|+|.+. ++++.+++ +.++++++.+ .+.|.++|
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~~~~EIIV-VDDgStD~t~~i-l~~~~~~~---~~~i~~i~~~-~n~G~~~a 74 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRTQDFNLII-VNDGSTDQSKKL-MDEAIKDY---DKNIRFIDLD-ENSGHAHA 74 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCCCCeEEEE-EECCCCCcHHHH-HHHHHHhC---CCCEEEEECC-CCCCHHHH
Confidence 378999999999999999999999999999877655 778899999874 44333221 4578888554 45679999
Q ss_pred HHHHhhhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHHHhhhhcc
Q 040333 163 LKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQEVGSATH 234 (513)
Q Consensus 163 ln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (513)
+|.|++.|. ++|+|. |++|+++++.+. ++ +++.+.....+.+.............. ..... ....
T Consensus 75 rN~gi~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~-~~--d~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~ 147 (729)
T 3l7i_A 75 RNIALEEVETPYFMFLDADDELASYAITFYLEKFN-NT--DGLIAPIHSFTTQRPQFVDLDRVRVEY-FNAKE---NINS 147 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhccCCEEEEECCCCCCChhHHHHHHHHhc-CC--CEEEEeeEEeecCCCccccccceeeee-ecchh---hHHH
Confidence 999999985 468888 999999999994 43 444444332222221111111111000 00000 0001
Q ss_pred CcccccccchHhhHHHHHHhC-CcCCCC-ccchHHHHHHHHhCCCeEEEe-ccceec
Q 040333 235 AFFGFNGTAGVWRIAAINEAG-GWKDRT-TVEDMDLAVRASLKGWKFVYL-GDLQVK 288 (513)
Q Consensus 235 ~~~~~~G~~~~~Rr~~l~~~G-g~~~~~-~~ED~~l~~rl~~~G~ki~~~-~~~~~~ 288 (513)
......+++.++||++++++| +|++.. ..||.+++.|+..+|+++.++ ++++.+
T Consensus 148 ~~~~~~~~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~~ 204 (729)
T 3l7i_A 148 FLRKQSACNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFYF 204 (729)
T ss_dssp ---------------------------------------------------------
T ss_pred HhhccchhheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEEE
Confidence 111245788999999999999 898874 699999999999999999999 666544
No 12
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.67 E-value=5.9e-16 Score=156.97 Aligned_cols=189 Identities=12% Similarity=0.020 Sum_probs=128.4
Q ss_pred CCCeEEEEEecCCChHHHHHHHHHHHc--CCCC-CCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEe------
Q 040333 82 NFPVVLIQIPMFNEKEVYKISIGAACG--LSWP-SDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIR------ 152 (513)
Q Consensus 82 ~~P~VsIiIP~yNE~~~l~~~l~sl~~--q~yp-~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~------ 152 (513)
..|+|||+||+|||++.|+++|+|+.+ |+|| +.+++| |+|+|+|+|.+.+.+ + ..+++..
T Consensus 92 ~~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIV-VDDgStD~T~~i~~~-----~-----~~~v~~~~~~~i~ 160 (387)
T 3f1y_A 92 LGLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILV-VDADSEDGTAGVAAS-----H-----GAEVYSENELMSG 160 (387)
T ss_dssp HTCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEE-EECSCSSSHHHHHHH-----T-----TCEEEEGGGTTGG
T ss_pred CCCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEE-EcCcCCccHHHHHHH-----h-----CchhcccceeEec
Confidence 358999999999999999999999986 4665 455444 777899999885433 2 2233322
Q ss_pred cCCCCCchhHHHHHhhhcc-----cccCCh----HHHHHHHHHHhhcCCCeEEEeeeEEEecCC--------CcHHHHHH
Q 040333 153 ENRTGYKAGALKEGLKRSY-----VKHCEY----PDYLRRAIPYLVQNSDIALVQARWRFVNAN--------ECLLTRMQ 215 (513)
Q Consensus 153 ~~~~g~Ka~aln~gl~~a~-----v~DaD~----pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~--------~~~~~~~~ 215 (513)
.+.+.||+.|+|.|++.|. ++|+|. |++|.+++..+.++|++++|.|........ .+...+..
T Consensus 161 ~~~n~G~g~A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~ 240 (387)
T 3f1y_A 161 YGDAHGKGDAMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELT 240 (387)
T ss_dssp GCSCCSHHHHHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHT
T ss_pred CCccCCHHHHHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhh
Confidence 2356789999999999985 468887 999999999997788999999875422110 12222210
Q ss_pred HhhhhhhhhHHHHhhhhccCcccccccchHhhHHHHHHhCCcCCCCccchHHHHHHHH-hCCCe-EEEeccceecc
Q 040333 216 EMSLDYHFKVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRAS-LKGWK-FVYLGDLQVKS 289 (513)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~~ED~~l~~rl~-~~G~k-i~~~~~~~~~~ 289 (513)
....... ............|++.++||++++++ +|+. ..++|.++..++. +.|++ +..+|-....+
T Consensus 241 ---~~~l~~~---~~~~l~~~~d~~sG~~a~rR~~l~~i-~f~~-gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h 308 (387)
T 3f1y_A 241 ---AKPLFNL---FYPELAGFVQPLAGEFVADRELFCSI-PFLT-GYAVETGIMIDVLKKVGLGAMAQVDLGERQN 308 (387)
T ss_dssp ---HHHHHHH---HCGGGTTCSCTTCSCEEEEHHHHTTS-CEEC-STTHHHHHHHHHHHHHCGGGEEEEEEEECCC
T ss_pred ---HHHHHHH---HhHhhccccccccccEEEEHHHHHhC-CCCC-CcchHHHHHHHHHHhcCCCeEEEEecceeec
Confidence 0000100 01111123334577889999999999 6754 4678999988885 56987 98888666443
No 13
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.58 E-value=6.5e-16 Score=150.26 Aligned_cols=170 Identities=15% Similarity=0.147 Sum_probs=115.3
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHH---cCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCc
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAAC---GLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYK 159 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~---~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~K 159 (513)
.|+||||||+||+++.++++|+|+. +|+|++++ |+|+||++|.+ -++
T Consensus 64 ~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~~~~E--IiVVdds~d~~----------------------------f~~ 113 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQLDYG--IYVINQAGDTI----------------------------FNR 113 (287)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEE--EEEEEECSSSC----------------------------CCH
T ss_pred CCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhcCCce--EEEEEeCCCCc----------------------------cch
Confidence 5899999999999999999999999 68887654 55666665521 136
Q ss_pred hhHHHHHh----hhcc-----cccCCh---HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhHHH
Q 040333 160 AGALKEGL----KRSY-----VKHCEY---PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQEMSLDYHFKVEQ 227 (513)
Q Consensus 160 a~aln~gl----~~a~-----v~DaD~---pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
+.++|.|+ +.|. ++|+|. ||++... ...+|+. ... .... .. +.
T Consensus 114 a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~~---~~~~p~~---------~~~---~~~~---~~----~~--- 168 (287)
T 2fy7_A 114 AKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYR---CFSQPRH---------ISV---AMDK---FG----FS--- 168 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCS---CCSSCEE---------CCC---EEGG---GT----TS---
T ss_pred hhhhhhHHHHHHHhCCCCEEEEECCCcccCCCcceEe---cCCCCce---------EEE---eecc---cc----cC---
Confidence 77889988 6663 469998 6642100 0011111 000 0000 00 00
Q ss_pred HhhhhccCcccccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEec-----cceec-------ccCC
Q 040333 228 EVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLG-----DLQVK-------SELP 292 (513)
Q Consensus 228 ~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~-----~~~~~-------~~~p 292 (513)
.....+.|+++++||+.++++|||++... .||.|++.|+.++|+++...+ ...++ .+.|
T Consensus 169 ------~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~ 242 (287)
T 2fy7_A 169 ------LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNP 242 (287)
T ss_dssp ------CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CC
T ss_pred ------CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCH
Confidence 01123568999999999999999998755 599999999999999988433 23232 2357
Q ss_pred cCHHHHHHHHHHhhhchhHHH
Q 040333 293 STFKAFRFQQHRWSCGPANLF 313 (513)
Q Consensus 293 ~t~~~~~~Qr~RW~~G~~~~~ 313 (513)
..++.+.+|+.||.++.++.+
T Consensus 243 ~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 243 QRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp CCCCCHHHHHHHTTTSSGGGC
T ss_pred HHHHHHhhcccEEcCCCcccC
Confidence 788889999999999977543
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.49 E-value=9.3e-15 Score=139.81 Aligned_cols=173 Identities=9% Similarity=-0.055 Sum_probs=110.0
Q ss_pred CCCCeEEEEEecCCChHHHHHHHHHHHc-CCCCCCceEEEEEcC-CCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCC
Q 040333 81 SNFPVVLIQIPMFNEKEVYKISIGAACG-LSWPSDRLVIQVLDD-STDPAIKQMVEQECQRWAAKGINIRYQIRENRTGY 158 (513)
Q Consensus 81 ~~~P~VsIiIP~yNE~~~l~~~l~sl~~-q~yp~~~~~I~V~Dd-stD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~ 158 (513)
.+.|.+||| |+||+++.+++||+|+.+ ...+.. .+|+|+|| |+|. .|
T Consensus 13 ~~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d~-----------------------------~g 61 (249)
T 2nxv_A 13 ESTLMFSVC-SLVRDQAKYDRLLESFERFGFTPDK-AEFLAADNREGNQ-----------------------------FH 61 (249)
T ss_dssp CCCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSCS-----------------------------CC
T ss_pred CCcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCc-EEEEEEECCCCCc-----------------------------cc
Confidence 345789974 679999999999997763 222222 55656666 4431 23
Q ss_pred chhHHHHHhhhcc-----cccCCh---HHHHHHHHHHhhc----CCCeEEEeeeEEEecCCCcHHHHHHHhhhhhhhhH-
Q 040333 159 KAGALKEGLKRSY-----VKHCEY---PDYLRRAIPYLVQ----NSDIALVQARWRFVNANECLLTRMQEMSLDYHFKV- 225 (513)
Q Consensus 159 Ka~aln~gl~~a~-----v~DaD~---pd~L~~lv~~~~~----~~~v~~V~~~~~~~n~~~~~~~~~~~~~~~~~~~~- 225 (513)
.+.|+|.|++.|. ++|+|. |++|+++++.+.+ +|++++++......+...... ..+ ........
T Consensus 62 ~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg~vg~~~~~~~~~g~~~-~~~--~~~~~~~~~ 138 (249)
T 2nxv_A 62 GFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWLVAGVAGSPWRPLNHSV-TAQ--ALHISDVFG 138 (249)
T ss_dssp TTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEEEEESEEEESSCSCTTS-CCC--EEEEEETTE
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCeeEEeecccccCCCCcee-eec--ccccCCccc
Confidence 6889999999985 468888 9999999999855 489988875443222111000 000 00000000
Q ss_pred -HHHhhhhccCcccccccchHhhHHHHHHhCCcCCCC---ccchHHHHHHHHhCCCeEEEeccceecccC
Q 040333 226 -EQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRT---TVEDMDLAVRASLKGWKFVYLGDLQVKSEL 291 (513)
Q Consensus 226 -~~~~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~~~~~---~~ED~~l~~rl~~~G~ki~~~~~~~~~~~~ 291 (513)
...............|+++++||++ .|||++.. ..||.|++.|+.++|+++.+.|.. ++|..
T Consensus 139 ~~~~~~~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~-v~H~~ 204 (249)
T 2nxv_A 139 NDRRRGNVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFH-LHHYG 204 (249)
T ss_dssp EEEEESCSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCC-CEECC
T ss_pred cccccCCCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccE-EEECC
Confidence 0000000111122468999999998 78998642 358999999999999999999865 55443
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.35 E-value=3.3e-12 Score=129.20 Aligned_cols=186 Identities=12% Similarity=0.081 Sum_probs=111.2
Q ss_pred EEEecCCChHHHHHHHHHHH-cCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHh-hcCCcEEEEEec-CC--CCCchhH
Q 040333 88 IQIPMFNEKEVYKISIGAAC-GLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWA-AKGINIRYQIRE-NR--TGYKAGA 162 (513)
Q Consensus 88 IiIP~yNE~~~l~~~l~sl~-~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~-~~~~~i~~i~~~-~~--~g~Ka~a 162 (513)
|+||+ ||+ .+..+++++. .+.+|+.+++| |+|||+|+|.+. +++++++.+ +.+.++...... .. +.||+.|
T Consensus 4 VIiP~-~eE-~I~~vl~~l~~~~~~~~~EIIV-VDDGStD~T~ei-a~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~A 79 (397)
T 2bo4_A 4 VVFPF-KHE-HPEVLLHNVRVAAAHPRVHEVL-CIGYERDQTYEA-VERAAPEISRATGTPVSVRLQERLGTLRPGKGDG 79 (397)
T ss_dssp EEEEC-CSS-CHHHHHHHHHHHHHSTTCCEEE-EEESSCCHHHHH-HHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHH
T ss_pred EEEeC-Ccc-CHHHHHHHHHHhccCCCeEEEE-EECcCCccHHHH-HHHhhhhcccccCCeEEEEecccCCCCCCCHHHH
Confidence 45555 443 4778888774 34456666554 888999999884 554554444 335555433212 12 5689999
Q ss_pred HHHHh----hhcc-----cccCCh----HHHHHHHHHHhhcCCCeEEEeeeEEEecCCCcHHHHHH-HhhhhhhhhHHHH
Q 040333 163 LKEGL----KRSY-----VKHCEY----PDYLRRAIPYLVQNSDIALVQARWRFVNANECLLTRMQ-EMSLDYHFKVEQE 228 (513)
Q Consensus 163 ln~gl----~~a~-----v~DaD~----pd~L~~lv~~~~~~~~v~~V~~~~~~~n~~~~~~~~~~-~~~~~~~~~~~~~ 228 (513)
++.|+ +.+. ++|||. |+++.+++..+. + +.++|.|...-. ...+...+.. ...+...+...
T Consensus 80 l~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~-~-g~D~V~g~~~r~-~~~~~~~~~~~~~ll~~~~~~~-- 154 (397)
T 2bo4_A 80 MNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAAD-F-GYGLVRHYFPRA-STDAMITWMITRTGFALLWPHT-- 154 (397)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHH-T-TCSEEEEECCCC-TTSCHHHHHTHHHHHHHHCTTS--
T ss_pred HHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHH-c-CCCEEEEEeccc-cCCcHHHHHHHHHHHHHHHHHh--
Confidence 99999 6663 478887 999999999883 3 577887753211 1222222211 00000001100
Q ss_pred hhhhccCcccccccchHhhHHHHHHhCCc----CCCCccchHHHHHHHHhCCCeEEEeccc
Q 040333 229 VGSATHAFFGFNGTAGVWRIAAINEAGGW----KDRTTVEDMDLAVRASLKGWKFVYLGDL 285 (513)
Q Consensus 229 ~~~~~~~~~~~~G~~~~~Rr~~l~~~Gg~----~~~~~~ED~~l~~rl~~~G~ki~~~~~~ 285 (513)
. .. ......++..++||++++++... .....+.|.++..++.++|+++..+|-.
T Consensus 155 -~-~~-~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 155 -E-LS-WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp -S-GG-GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred -h-cc-ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 0 00 11111245558999999987321 2233567999999999999999888743
No 16
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=98.82 E-value=2.2e-08 Score=96.92 Aligned_cols=112 Identities=14% Similarity=0.134 Sum_probs=74.5
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHH--HHHHHHHHHHhh-cCCcEEEEEecC-----
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIK--QMVEQECQRWAA-KGINIRYQIREN----- 154 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~--~l~~~~~~~~~~-~~~~i~~i~~~~----- 154 (513)
..++|||||||||+.. +++++++|.+.+.++++ |+|+|+|.+.. +++++ +.. .+.++.++|..+
T Consensus 52 ~~klSIVVPvYNEe~~---lLesVl~qi~~d~eIIl-VdDGS~D~s~~e~dil~~----~~~~~~~ri~viHQkn~gls~ 123 (391)
T 2wvl_A 52 LEQTAIVVPTRNERLK---LLEGVLSGIPHEALILV-ASNSSPDRFQMERDLLEE----FAHLTERPALIFHQKDPALAE 123 (391)
T ss_dssp HTTEEEEEEESSCCHH---HHHHHHHTSCTTSEEEE-EECCCHHHHHHHHHHHHH----HHHHTTCCEEEEETTCHHHHH
T ss_pred HhceEEEEeccCcHHH---HHHHHHhcCCCCceEEE-EECCCCCChHhHHHHHHH----HHhhcccceEEEeccChHHHH
Confidence 4679999999999974 69999999988766554 77888898843 23333 443 367888887421
Q ss_pred ----------------CCCCchhHHHHHhhhcc--------cccCCh--HHHHHHHHHHhh-----cCCCeEEEeeeEE
Q 040333 155 ----------------RTGYKAGALKEGLKRSY--------VKHCEY--PDYLRRAIPYLV-----QNSDIALVQARWR 202 (513)
Q Consensus 155 ----------------~~g~Ka~aln~gl~~a~--------v~DaD~--pd~L~~lv~~~~-----~~~~v~~V~~~~~ 202 (513)
.+.||+.++-.|+..|+ +.|+|. |....+.+..+. +....++|--.|+
T Consensus 124 Ar~~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~~~MVRI~wR 202 (391)
T 2wvl_A 124 ALRAGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTPFAMVRILWR 202 (391)
T ss_dssp HHHHTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSSEEEEEEECC
T ss_pred HHHhcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCCcceEEEecc
Confidence 22468888888888872 479999 444444433331 2245677733343
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=98.56 E-value=2.3e-07 Score=92.35 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=61.3
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHc-CCCCCCceEEEEEcCCCcHH------HHHHHHHHHHHHhhcCCcEEEEEecC--
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACG-LSWPSDRLVIQVLDDSTDPA------IKQMVEQECQRWAAKGINIRYQIREN-- 154 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~-q~yp~~~~~I~V~DdstD~t------~~~l~~~~~~~~~~~~~~i~~i~~~~-- 154 (513)
.++|||||||||++.+ +..+++ ..+ ..++ |+|+|+|+|+| .+ +++++++.. ...+.+++.++
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i~~-~~eI-IvVDDgSrD~tD~~~~~~~-~l~~~~~~~---~~~~~Vl~~~~p~ 121 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAIPH-KCPI-IIVSNSKREGPNRYKLEVD-LIRHFYNLT---HSKIIMIHQKDPG 121 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHSCT-TSCE-EEEECCCCSSSCHHHHHHH-HHHHHHHHH---CCCEEEEETTCHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcCCC-CcEE-EEEECcCcccccchhhHHH-HHHHHhhcc---ccceEEEecCCcc
Confidence 4699999999999653 444433 333 2444 44778886655 33 333333321 23455565443
Q ss_pred --------------------CCCCchhHHHHHhhhc---c-----cccCCh--HHHHHHHHHHh
Q 040333 155 --------------------RTGYKAGALKEGLKRS---Y-----VKHCEY--PDYLRRAIPYL 188 (513)
Q Consensus 155 --------------------~~g~Ka~aln~gl~~a---~-----v~DaD~--pd~L~~lv~~~ 188 (513)
++ ||..|+-.|+..| . ++|||. |..+.+.+..+
T Consensus 122 v~~~~~~~g~~~il~~~~~~r~-GKG~Am~aGl~~A~~~~gd~Vv~~DaDl~iP~~v~~~~kgy 184 (394)
T 2zu9_A 122 LAKAFKEVGYTDILDENGMIRS-GKGEGMLVGLLLAKAIGAEYVGFVDADNYIPGAVNEYVKDY 184 (394)
T ss_dssp HHHHHHHHTCCTTBCTTSSBCC-SHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHH
T ss_pred hhHHhhhccccccccccccccC-ChHHHHHHHHHHHhhCCCCEEEEEeCCCCCHHHHHHHHHHh
Confidence 24 7999999999998 3 379999 88887777665
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=98.07 E-value=9.5e-06 Score=80.08 Aligned_cols=109 Identities=14% Similarity=0.128 Sum_probs=66.7
Q ss_pred CeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEec--------CC
Q 040333 84 PVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRE--------NR 155 (513)
Q Consensus 84 P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~--------~~ 155 (513)
+.++|+|++||..+ ++++|+|+++|+.+....+|+|.||+.++.++.+++. +. .++.++..+ ++
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~----~~---~~I~~~~~~d~~~~~~~~~ 73 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIAS----YG---SAVTHIRQPDLSNIAVQPD 73 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHT----TG---GGSEEEECSCCCCCCCCTT
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHH----cC---CceEEEEcCCccccccchh
Confidence 45789999999999 9999999999985544444556666444444445542 21 235554221 11
Q ss_pred CCCch----------hHHHHHhhhcc-----cccCCh---HHHHHH---HHHHhhcCCCeEEEeee
Q 040333 156 TGYKA----------GALKEGLKRSY-----VKHCEY---PDYLRR---AIPYLVQNSDIALVQAR 200 (513)
Q Consensus 156 ~g~Ka----------~aln~gl~~a~-----v~DaD~---pd~L~~---lv~~~~~~~~v~~V~~~ 200 (513)
+.|-+ .++|.+++.+. ++|.|. ||+++. +.+.++.|+.+.++++-
T Consensus 74 N~g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~~ISa~ 139 (343)
T 1fo8_A 74 HRKFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAW 139 (343)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESC
T ss_pred hcCcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEEEEecc
Confidence 11111 24555555221 467777 887754 55555778999888754
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=97.00 E-value=0.00055 Score=64.29 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=55.9
Q ss_pred cccccchHhhHHHHHHhCCcCCCCc---cchHHHHHHHHhCCCeEEEeccc-e-----ec--c-------cCCcCHHHHH
Q 040333 238 GFNGTAGVWRIAAINEAGGWKDRTT---VEDMDLAVRASLKGWKFVYLGDL-Q-----VK--S-------ELPSTFKAFR 299 (513)
Q Consensus 238 ~~~G~~~~~Rr~~l~~~Gg~~~~~~---~ED~~l~~rl~~~G~ki~~~~~~-~-----~~--~-------~~p~t~~~~~ 299 (513)
.+.|+.++++|+.+.++|||++... .||.|+..|+..+|.++.-.+.. . .. + +.|..+....
T Consensus 157 ~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~~~~gry~m~~H~hd~~~r~rd~~k~~~~~~ 236 (287)
T 3lw6_A 157 NFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKRDTQKCFNQKE 236 (287)
T ss_dssp TCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSSCCCCTTTSEEECCCTTTSCCCCCCCTTHHH
T ss_pred CccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCCccccceeEEeccccccccCCcccchhhhhh
Confidence 3568999999999999999998765 89999999999999988655432 1 11 1 1233445566
Q ss_pred HHHHHhhhchhHHH
Q 040333 300 FQQHRWSCGPANLF 313 (513)
Q Consensus 300 ~Qr~RW~~G~~~~~ 313 (513)
.++.||..+.+..+
T Consensus 237 ~~~~r~~~dGLnsl 250 (287)
T 3lw6_A 237 MTRKRDHKTGLDNV 250 (287)
T ss_dssp HHTSCCSSCSGGGC
T ss_pred hhcEEccCCCCeee
Confidence 77888877766544
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=57.33 E-value=3.5 Score=36.44 Aligned_cols=41 Identities=5% Similarity=-0.037 Sum_probs=30.0
Q ss_pred ccccchHhhHHHHHHhCC--c-------CCCCccchHHHHHHHHhCCCeE
Q 040333 239 FNGTAGVWRIAAINEAGG--W-------KDRTTVEDMDLAVRASLKGWKF 279 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg--~-------~~~~~~ED~~l~~rl~~~G~ki 279 (513)
.+++++++||++++.+-. | ..+..+||..++..+..+|+.+
T Consensus 116 ~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 116 CGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp ECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred ccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 446778899999998731 2 1234589999999999888876
No 21
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=43.22 E-value=1.7e+02 Score=26.61 Aligned_cols=38 Identities=11% Similarity=0.175 Sum_probs=23.5
Q ss_pred CCeEEEEEecCCCh---HHHHHHHHHHHcCCCCCCceEEEEEcC
Q 040333 83 FPVVLIQIPMFNEK---EVYKISIGAACGLSWPSDRLVIQVLDD 123 (513)
Q Consensus 83 ~P~VsIiIP~yNE~---~~l~~~l~sl~~q~yp~~~~~I~V~Dd 123 (513)
.|.+-||-|+|... ..+.+.-..+... |+...+| |-|+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~V--p~l~WIV-VEd~ 42 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAELTRLANTFRQV--AQLHWIL-VEDA 42 (246)
T ss_dssp CCCEEEEEEECCSTTHHHHHHHHHHHHTTS--TTEEEEE-EESS
T ss_pred CCEEEEEeCCCCccchhHHHHHHHHHHhcC--CceEEEE-EcCC
Confidence 58899999999987 3555555555432 5433332 4453
No 22
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=39.98 E-value=1.4e+02 Score=27.69 Aligned_cols=40 Identities=10% Similarity=0.102 Sum_probs=22.7
Q ss_pred CCCCCeEEEEEecCCCh---HHHHHHHHHHHcCCCCCCceEEEEEc
Q 040333 80 SSNFPVVLIQIPMFNEK---EVYKISIGAACGLSWPSDRLVIQVLD 122 (513)
Q Consensus 80 ~~~~P~VsIiIP~yNE~---~~l~~~l~sl~~q~yp~~~~~I~V~D 122 (513)
.+..|.|-||-|+|... ..+.+.-..+... |+...+| |-|
T Consensus 17 ~~~~p~IivVTPTy~R~~Q~a~LtRLa~TL~~V--p~L~WIV-VEd 59 (281)
T 3cu0_A 17 RGSHMTIYVVTPTYARLVQKAELVRLSQTLSLV--PRLHWLL-VED 59 (281)
T ss_dssp ----CEEEEEEEECCSTTHHHHHHHHHHHHTTS--SSEEEEE-EES
T ss_pred CCCCCeEEEEeCCCCCcchhHHHHHHHHHHhcC--CceEEEE-EcC
Confidence 35679999999999987 3555555555433 5433333 445
No 23
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=35.74 E-value=1.8e+02 Score=24.57 Aligned_cols=81 Identities=11% Similarity=0.076 Sum_probs=46.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhc--c
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRS--Y 171 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a--~ 171 (513)
++...++.+++++.+.. -.++.| |.+. .++. +.+ +.. ..++.++..+....|-.+++..|++.. .
T Consensus 29 ~g~pli~~~l~~l~~~~--~~~i~v-v~~~-~~~~---~~~-----~~~-~~~~~~~~~~~~~~g~~~~i~~al~~~~~~ 95 (199)
T 2waw_A 29 GDTTLLGATLAMARRCP--FDQLIV-TLGG-AADE---VLE-----KVE-LDGLDIVLVDDAGLGCSSSLKSALTWVDPT 95 (199)
T ss_dssp TTEEHHHHHHHHHHTSS--CSEEEE-EECT-THHH---HHH-----HSC-CTTSEEEECCCCCTTCCCHHHHHHHTSCTT
T ss_pred CccCHHHHHHHHHHhCC--CCcEEE-EeCC-CHHH---HHH-----Hhc-cCCCEEEECCCcccCHHHHHHHHHHhhhcc
Confidence 44578999999998764 234433 4433 2222 221 111 123445433333335677888888764 1
Q ss_pred -----cccCCh----HHHHHHHHHH
Q 040333 172 -----VKHCEY----PDYLRRAIPY 187 (513)
Q Consensus 172 -----v~DaD~----pd~L~~lv~~ 187 (513)
+.++|. ++.++++++.
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (199)
T 2waw_A 96 AEGIVLMLGDQPGITASAVASLIAG 120 (199)
T ss_dssp CSEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcccCCHHHHHHHHhh
Confidence 467887 7888888876
No 24
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=33.58 E-value=1.4e+02 Score=25.39 Aligned_cols=81 Identities=21% Similarity=0.198 Sum_probs=45.3
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhc--c
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRS--Y 171 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a--~ 171 (513)
+....++.+++++.+.. -.++.| |.+.. ++. +.+ . . . ..+++++..+....|-.+++..|++.. .
T Consensus 29 ~g~pll~~~l~~l~~~~--~~~i~v-v~~~~-~~~---~~~-~---~-~-~~~~~~~~~~~~~~g~~~~i~~al~~~~~~ 95 (197)
T 2wee_A 29 RDTTVLGATLDVARQAG--FDQLIL-TLGGA-ASA---VRA-A---M-A-LDGTDVVVVEDVERGCAASLRVALARVHPR 95 (197)
T ss_dssp TTEEHHHHHHHHHHHTT--CSEEEE-EECTT-HHH---HHH-H---S-C-CTTSEEEECC----CCHHHHHHHHTTSCTT
T ss_pred CCccHHHHHHHHHHhcC--CCcEEE-EeCCC-HHH---HHH-H---h-c-cCCCEEEECCCcccCHHHHHHHHHHHhccc
Confidence 44578999999998654 234433 44332 222 221 1 1 1 124555543323335778888888764 1
Q ss_pred -----cccCCh----HHHHHHHHHH
Q 040333 172 -----VKHCEY----PDYLRRAIPY 187 (513)
Q Consensus 172 -----v~DaD~----pd~L~~lv~~ 187 (513)
+.++|. ++.++++++.
T Consensus 96 ~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 96 ATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp EEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred CCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 468887 7888888876
No 25
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=31.32 E-value=1.2e+02 Score=26.55 Aligned_cols=79 Identities=10% Similarity=0.118 Sum_probs=46.0
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhhhc---
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLKRS--- 170 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~~a--- 170 (513)
+....++.+++.+... +++| |..+ ++..+.+ .. ..++.++.......|...++..|++.+
T Consensus 24 ~G~pli~~~~~~l~~~-----~vvv-v~~~--~~~~~~~--------~~-~~~~~~v~d~~~~~G~~~si~~gl~~~~~~ 86 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF-----QTVF-VCRD--EKQAEKL--------SS-RYEAEFIWDLHKGVGSIAGIHAALRHFGSC 86 (208)
T ss_dssp TTEEHHHHHHHHHTTS-----EEEE-ECSS--HHHHHHH--------HT-TSCSCEECCTTCCCSHHHHHHHHHHHHSSE
T ss_pred CCeeHHHHHHHHhcCC-----CEEE-EECC--HHHHHHH--------HH-hcCCeEEecCCCCCChHHHHHHHHHHcCCC
Confidence 6667899999998754 3333 4322 2222211 11 123455533323334556777777642
Q ss_pred ccccCCh----HHHHHHHHHHhh
Q 040333 171 YVKHCEY----PDYLRRAIPYLV 189 (513)
Q Consensus 171 ~v~DaD~----pd~L~~lv~~~~ 189 (513)
.+.+||. ++.+++++..+.
T Consensus 87 vv~~~D~P~i~~~~i~~l~~~~~ 109 (208)
T 3ngw_A 87 VVAAIDMPFVKPEVLEHLYKEGE 109 (208)
T ss_dssp EEEETTCTTCCHHHHHHHHHHHH
T ss_pred EEEECCccCCCHHHHHHHHHHhh
Confidence 1678888 899999998874
No 26
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=30.76 E-value=1.6e+02 Score=27.64 Aligned_cols=105 Identities=9% Similarity=0.124 Sum_probs=57.3
Q ss_pred CCeEEEEEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhH
Q 040333 83 FPVVLIQIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGA 162 (513)
Q Consensus 83 ~P~VsIiIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~a 162 (513)
....||+|-+|+..+.+.+.|+.+.+..+- .+++| |=.+...+..+.... .+......++++..+ ++ .
T Consensus 27 ~~~FTvvi~ty~R~~~L~~lv~~~~~~~~v-~~IvV-vWn~~~~~pp~~~~~----~~~~~~vpv~v~~~~-~n-----s 94 (293)
T 1omz_A 27 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSL-HKVIV-VWNNVGEKGPEELWN----SLGPHPIPVIFKPQT-AN-----K 94 (293)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTE-EEEEE-EECCTTCCCTHHHHH----HTCCCSSCEEEEECS-SC-----C
T ss_pred CCceEEEEEeecccHHHHHHHHHHhcCCCC-CeEEE-EeCCCCCCCChhhcc----ccCCCCccEEEEeCC-CC-----c
Confidence 457999999999999999999988665432 23333 333322221121111 121223567776332 22 2
Q ss_pred HHHHhhh---c---cc--ccCCh---HHHHHHHHHHhhcCCCeEEEeee
Q 040333 163 LKEGLKR---S---YV--KHCEY---PDYLRRAIPYLVQNSDIALVQAR 200 (513)
Q Consensus 163 ln~gl~~---a---~v--~DaD~---pd~L~~lv~~~~~~~~v~~V~~~ 200 (513)
+|.=+.- . -| +|.|. .+.|+.......++|+- +|+-.
T Consensus 95 LnnRF~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdR-lVGf~ 142 (293)
T 1omz_A 95 MRNRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQ-IIGFV 142 (293)
T ss_dssp GGGGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTS-EEESC
T ss_pred hhhccCCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccc-eecCc
Confidence 2222211 1 13 58887 88888777777677762 44433
No 27
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=30.18 E-value=2.2e+02 Score=25.90 Aligned_cols=43 Identities=14% Similarity=0.254 Sum_probs=30.0
Q ss_pred cccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEec
Q 040333 240 NGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYLG 283 (513)
Q Consensus 240 ~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 283 (513)
+.+-.+||+++++....++...+ .|..+ ..|+..+|+++....
T Consensus 190 ~~GiY~y~~~~l~~~~~l~~s~lE~~e~le-qlr~le~G~~i~~~~ 234 (256)
T 3tqd_A 190 HVGIYAYRVGFLEEYLSWDACPAEKMEALE-QLRILWHGGRIHMVV 234 (256)
T ss_dssp EEEEEEEEHHHHHHHHHSCCCHHHHHHTCT-THHHHHTTCCCEEEE
T ss_pred EEEEEEcCHHHHHHHHhCCCCcccchhhhH-HHHHHHCCCeEEEEE
Confidence 45678899999999876655433 23333 357788999987655
No 28
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=30.15 E-value=1.7e+02 Score=29.60 Aligned_cols=92 Identities=18% Similarity=0.157 Sum_probs=54.3
Q ss_pred EEecCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecCCCCCchhHHHHHhh
Q 040333 89 QIPMFNEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIRENRTGYKAGALKEGLK 168 (513)
Q Consensus 89 iIP~yNE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~~~g~Ka~aln~gl~ 168 (513)
++|+.|.+ .|+..|+++.+... .++.| |+ +...+..+....+..+ ..+.+++++..+++ .|-++|+..+++
T Consensus 34 l~pv~gkp-~i~~~l~~~~~~g~--~~i~v-v~-~~~~~~i~~~~~~~~~---~~~~~i~~~~q~~~-lGTa~Av~~a~~ 104 (501)
T 3st8_A 34 LHTLAGRS-MLSHVLHAIAKLAP--QRLIV-VL-GHDHQRIAPLVGELAD---TLGRTIDVALQDRP-LGTGHAVLCGLS 104 (501)
T ss_dssp GCEETTEE-HHHHHHHHHHHHCC--SEEEE-EE-CTTHHHHHHHHHHHHH---HHTSCCEEEECSSC-CCHHHHHHHHHT
T ss_pred HeEECChh-HHHHHHHHHHhCCC--CEEEE-Ee-CCCHHHHHHHHHHHHH---hcCCcEEEEEcCCC-CCcHHHHHHHHH
Confidence 57888865 78888888876542 34444 44 2222333322222222 23678888866554 458899888877
Q ss_pred hcc--------cccCCh----HHHHHHHHHHhh
Q 040333 169 RSY--------VKHCEY----PDYLRRAIPYLV 189 (513)
Q Consensus 169 ~a~--------v~DaD~----pd~L~~lv~~~~ 189 (513)
... ++.+|. ++.+.+++....
T Consensus 105 ~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~ 137 (501)
T 3st8_A 105 ALPDDYAGNVVVTSGDTPLLDADTLADLIATHR 137 (501)
T ss_dssp TSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHH
T ss_pred HhccccccceeeecCcceeecHHHHHHHHHHHh
Confidence 642 233443 788888877653
No 29
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=26.84 E-value=2.4e+02 Score=25.50 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=28.6
Q ss_pred cccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEec
Q 040333 240 NGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYLG 283 (513)
Q Consensus 240 ~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~~ 283 (513)
+.+-.+||++.+++...++...+ +|..+ .+|+..+|+++....
T Consensus 182 ~~GiY~f~~~~l~~~~~~~~~~le~~e~le-~lr~l~~G~~I~~~~ 226 (253)
T 4fcu_A 182 HLGLYAYRVSLLQEYVTWEMGKLEKLESLE-QLRVLENGHRIAIAV 226 (253)
T ss_dssp EEEEEEEEHHHHHHHTTSCCCHHHHHHTCT-THHHHHTTCCEEEEE
T ss_pred EEEEEEeCHHHHHHHHhCCCCcccchhHHH-HHHHHHCCCceEEEE
Confidence 56778899999999876654322 22222 235668899987554
No 30
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=26.70 E-value=1.8e+02 Score=26.65 Aligned_cols=45 Identities=13% Similarity=0.218 Sum_probs=27.4
Q ss_pred CCeEEEEEecCCCh---HHHHHHHHHHHcCCCCCCceEEEEEcCC--CcHHHH
Q 040333 83 FPVVLIQIPMFNEK---EVYKISIGAACGLSWPSDRLVIQVLDDS--TDPAIK 130 (513)
Q Consensus 83 ~P~VsIiIP~yNE~---~~l~~~l~sl~~q~yp~~~~~I~V~Dds--tD~t~~ 130 (513)
.|.+-||-|+|... ..+.+.-..+.. -|+...+| |-|.+ ++.+.+
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~LtRLa~TL~~--Vp~L~WIV-VEd~~~~t~~va~ 51 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAELTRMANTLLH--VPNLHWLV-VEDAPRRTPLTAR 51 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHHHHHHHHHTT--SSSEEEEE-EESSSSCCHHHHH
T ss_pred CCEEEEEeCCCCccchhHHHHHHhhhhcc--CCceEEEE-EeCCCCCCHHHHH
Confidence 58999999999987 355555555533 36544433 55532 344444
No 31
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=20.60 E-value=2e+02 Score=25.13 Aligned_cols=81 Identities=19% Similarity=0.204 Sum_probs=43.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCceEEEEEcCCCcHHHHHHHHHHHHHHhhcCCcEEEEEecC----CCCCchhHHHHHhhh
Q 040333 94 NEKEVYKISIGAACGLSWPSDRLVIQVLDDSTDPAIKQMVEQECQRWAAKGINIRYQIREN----RTGYKAGALKEGLKR 169 (513)
Q Consensus 94 NE~~~l~~~l~sl~~q~yp~~~~~I~V~DdstD~t~~~l~~~~~~~~~~~~~~i~~i~~~~----~~g~Ka~aln~gl~~ 169 (513)
+....++.+++++.+...- ++++| +.++ +..+ +.+++ .+ +.++.+++ ...|...++..|++.
T Consensus 27 ~gkpll~~~l~~~~~~~~~-~~ivv-v~~~---~~i~----~~~~~---~~--~~~~~~~~~~~~~~~g~~~sv~~~l~~ 92 (228)
T 1ezi_A 27 NGISLLGHTINAAISSKCF-DRIIV-STDG---GLIA----EEAKN---FG--VEVVLRPAELASDTASSISGVIHALET 92 (228)
T ss_dssp TTEEHHHHHHHHHHHHCCC-SEEEE-EESC---HHHH----HHHHH---TT--CEEEECCC------CHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHhCCCC-CEEEE-ECCC---HHHH----HHHHH---cC--CEEEeCchHHcCCCCChHHHHHHHHHH
Confidence 3456888999988764322 34433 4442 2222 12222 13 33343332 122345566677665
Q ss_pred c----c---cccCCh----HHHHHHHHHHh
Q 040333 170 S----Y---VKHCEY----PDYLRRAIPYL 188 (513)
Q Consensus 170 a----~---v~DaD~----pd~L~~lv~~~ 188 (513)
. . +.++|. ++.+++++..+
T Consensus 93 ~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~ 122 (228)
T 1ezi_A 93 IGSNSGTVTLLQPTSPLRTGAHIREAFSLF 122 (228)
T ss_dssp HTCCSEEEEECCTTCTTCCHHHHHHHHTTC
T ss_pred hCCCCCEEEEEcCCCCcCCHHHHHHHHHHH
Confidence 4 1 468886 78899998876
No 32
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=20.55 E-value=3.6e+02 Score=24.47 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=28.7
Q ss_pred ccccchHhhHHHHHHhCCcCCCCc--cchHHHHHHHHhCCCeEEEe
Q 040333 239 FNGTAGVWRIAAINEAGGWKDRTT--VEDMDLAVRASLKGWKFVYL 282 (513)
Q Consensus 239 ~~G~~~~~Rr~~l~~~Gg~~~~~~--~ED~~l~~rl~~~G~ki~~~ 282 (513)
.+.+..+||++++++.-..+...+ .|..+ ..|+..+|+++...
T Consensus 196 ~~~GiY~y~~~~l~~~~~~~~~~lE~~e~le-qlr~le~G~~I~~~ 240 (264)
T 3k8d_A 196 RHLGIYGYRAGFIRRYVNWQPSPLEHIEMLE-QLRVLWYGEKIHVA 240 (264)
T ss_dssp EECSEEEEEHHHHHHHHHSCCCHHHHHHTCT-THHHHHTTCCEEEE
T ss_pred EEEEEEEECHHHHHHHHhCCCChhhhHHHHH-HHHHHHCCCceEEE
Confidence 356778899999998765543322 22222 25778999998775
Done!