BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040341
(251 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PSN|A Chain A, Crystal Structure Of Enolase1
pdb|2PSN|B Chain B, Crystal Structure Of Enolase1
pdb|2PSN|C Chain C, Crystal Structure Of Enolase1
pdb|2PSN|D Chain D, Crystal Structure Of Enolase1
Length = 434
Score = 343 bits (880), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/246 (69%), Positives = 198/246 (80%), Gaps = 5/246 (2%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK+KYG+DATNVGDEGGFAPNI E+ EG ELLKTAI K GY K+VIGMDVAASEF
Sbjct: 192 LKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKVVIGMDVAASEF 251
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ S YDL+FK + D S+ +S D L ++Y+SFI D+P+VSIEDPFDQDDW + T
Sbjct: 252 FRSG--KYDLDFKSPD-DPSRYISPDQLADLYKSFIKDYPVVSIEDPFDQDDWGAWQKFT 308
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +Q+VGDDL VTNPKR+ KA+ EK+CN LLLKVNQIGSVTES++A K+++ GWG
Sbjct: 309 ASAG--IQVVGDDLTVTNPKRIAKAVNEKSCNCLLLKVNQIGSVTESLQACKLAQANGWG 366
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG A +AG
Sbjct: 367 VMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAKFAGR 426
Query: 243 KFRAPV 248
FR P+
Sbjct: 427 NFRNPL 432
>pdb|3B97|A Chain A, Crystal Structure Of Human Enolase 1
pdb|3B97|B Chain B, Crystal Structure Of Human Enolase 1
pdb|3B97|C Chain C, Crystal Structure Of Human Enolase 1
pdb|3B97|D Chain D, Crystal Structure Of Human Enolase 1
Length = 433
Score = 343 bits (879), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/246 (69%), Positives = 198/246 (80%), Gaps = 5/246 (2%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK+KYG+DATNVGDEGGFAPNI E+ EG ELLKTAI K GY K+VIGMDVAASEF
Sbjct: 191 LKNVIKEKYGKDATNVGDEGGFAPNILENKEGLELLKTAIGKAGYTDKVVIGMDVAASEF 250
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ S YDL+FK + D S+ +S D L ++Y+SFI D+P+VSIEDPFDQDDW + T
Sbjct: 251 FRSG--KYDLDFKSPD-DPSRYISPDQLADLYKSFIKDYPVVSIEDPFDQDDWGAWQKFT 307
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +Q+VGDDL VTNPKR+ KA+ EK+CN LLLKVNQIGSVTES++A K+++ GWG
Sbjct: 308 ASAG--IQVVGDDLTVTNPKRIAKAVNEKSCNCLLLKVNQIGSVTESLQACKLAQANGWG 365
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG A +AG
Sbjct: 366 VMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAKFAGR 425
Query: 243 KFRAPV 248
FR P+
Sbjct: 426 NFRNPL 431
>pdb|1PDZ|A Chain A, X-Ray Structure And Catalytic Mechanism Of Lobster Enolase
pdb|1PDY|A Chain A, X-Ray Structure And Catalytic Mechanism Of Lobster Enolase
Length = 434
Score = 340 bits (872), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 165/245 (67%), Positives = 194/245 (79%), Gaps = 3/245 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+AVIK ++G DAT VGDEGGFAPNI + + +L++ AI K GY GKI IGMDVAASEF
Sbjct: 192 LKAVIKARFGLDATAVGDEGGFAPNILNNKDALDLIQEAIKKAGYTGKIEIGMDVAASEF 251
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
Y ++ YDL+FK NNDGSQK+SGD L+++Y F D PIVSIEDPFDQDDWE +++T
Sbjct: 252 Y-KQNNIYDLDFKTANNDGSQKISGDQLRDMYMEFCKDFPIVSIEDPFDQDDWETWSKMT 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIVGDDL VTNPKR+ A+++K C LLLKVNQIGSVTESI+A ++K+ GWG
Sbjct: 311 S--GTTIQIVGDDLTVTNPKRITTAVEKKACKCLLLKVNQIGSVTESIDAHLLAKKNGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
M SHRSGETED FIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG A +AG
Sbjct: 369 TMVSHRSGETEDCFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSGAKFAGK 428
Query: 243 KFRAP 247
FRAP
Sbjct: 429 NFRAP 433
>pdb|1TE6|A Chain A, Crystal Structure Of Human Neuron Specific Enolase At 1.8
Angstrom
pdb|1TE6|B Chain B, Crystal Structure Of Human Neuron Specific Enolase At 1.8
Angstrom
pdb|2AKM|A Chain A, Fluoride Inhibition Of Enolase: Crystal Structure Of The
Inhibitory Complex
pdb|2AKM|B Chain B, Fluoride Inhibition Of Enolase: Crystal Structure Of The
Inhibitory Complex
pdb|2AKZ|A Chain A, Fluoride Inhibition Of Enolase: Crystal Structure Of The
Inhibitory Complex
pdb|2AKZ|B Chain B, Fluoride Inhibition Of Enolase: Crystal Structure Of The
Inhibitory Complex
Length = 439
Score = 340 bits (871), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 167/245 (68%), Positives = 196/245 (80%), Gaps = 5/245 (2%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK KYG+DATNVGDEGGFAPNI E+ E EL+K AI K GY KIVIGMDVAASEF
Sbjct: 191 LKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEF 250
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
Y +D YDL+FK D S+ ++GD L +Y+ F+ D+P+VSIEDPFDQDDW ++ T
Sbjct: 251 Y--RDGKYDLDFKSPT-DPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFT 307
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
+G +QIVGDDL VTNPKR+E+A++EK CN LLLKVNQIGSVTE+I+A K+++ GWG
Sbjct: 308 ANVG--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWG 365
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEEELG A +AG
Sbjct: 366 VMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGH 425
Query: 243 KFRAP 247
FR P
Sbjct: 426 NFRNP 430
>pdb|3UJE|A Chain A, Asymmetric Complex Of Human Neuron Specific
Enolase-3-PgaPEP
pdb|3UJE|B Chain B, Asymmetric Complex Of Human Neuron Specific
Enolase-3-PgaPEP
pdb|3UJF|A Chain A, Asymmetric Complex Of Human Neuron Specific
Enolase-4-PgaPEP
pdb|3UJF|B Chain B, Asymmetric Complex Of Human Neuron Specific
Enolase-4-PgaPEP
pdb|3UJR|A Chain A, Asymmetric Complex Of Human Neuron Specific
Enolase-5-PgaPEP
pdb|3UJR|B Chain B, Asymmetric Complex Of Human Neuron Specific
Enolase-5-PgaPEP
pdb|3UJS|A Chain A, Asymmetric Complex Of Human Neuron Specific
Enolase-6-PgaPEP
pdb|3UJS|B Chain B, Asymmetric Complex Of Human Neuron Specific
Enolase-6-PgaPEP
Length = 443
Score = 340 bits (871), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 167/245 (68%), Positives = 196/245 (80%), Gaps = 5/245 (2%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK KYG+DATNVGDEGGFAPNI E+ E EL+K AI K GY KIVIGMDVAASEF
Sbjct: 191 LKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEF 250
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
Y +D YDL+FK D S+ ++GD L +Y+ F+ D+P+VSIEDPFDQDDW ++ T
Sbjct: 251 Y--RDGKYDLDFKSPT-DPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFT 307
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
+G +QIVGDDL VTNPKR+E+A++EK CN LLLKVNQIGSVTE+I+A K+++ GWG
Sbjct: 308 ANVG--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWG 365
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEEELG A +AG
Sbjct: 366 VMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGH 425
Query: 243 KFRAP 247
FR P
Sbjct: 426 NFRNP 430
>pdb|3UCC|A Chain A, Asymmetric Complex Of Human Neuron Specific
Enolase-1-PgaPEP
pdb|3UCC|B Chain B, Asymmetric Complex Of Human Neuron Specific
Enolase-1-PgaPEP
pdb|3UCD|A Chain A, Asymmetric Complex Of Human Neuron Specific
Enolase-2-PgaPEP
pdb|3UCD|B Chain B, Asymmetric Complex Of Human Neuron Specific
Enolase-2-PgaPEP
Length = 439
Score = 339 bits (870), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 167/245 (68%), Positives = 196/245 (80%), Gaps = 5/245 (2%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK KYG+DATNVGDEGGFAPNI E+ E EL+K AI K GY KIVIGMDVAASEF
Sbjct: 191 LKGVIKDKYGKDATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEF 250
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
Y +D YDL+FK D S+ ++GD L +Y+ F+ D+P+VSIEDPFDQDDW ++ T
Sbjct: 251 Y--RDGKYDLDFKSPT-DPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFT 307
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
+G +QIVGDDL VTNPKR+E+A++EK CN LLLKVNQIGSVTE+I+A K+++ GWG
Sbjct: 308 ANVG--IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWG 365
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEEELG A +AG
Sbjct: 366 VMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEELGDEARFAGH 425
Query: 243 KFRAP 247
FR P
Sbjct: 426 NFRNP 430
>pdb|2XSX|A Chain A, Crystal Structure Of Human Beta Enolase Enob
pdb|2XSX|B Chain B, Crystal Structure Of Human Beta Enolase Enob
Length = 435
Score = 334 bits (856), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 164/245 (66%), Positives = 195/245 (79%), Gaps = 5/245 (2%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK KYG+DATNVGDEGGFAPNI E+ E ELLKTAI GY K+VIGMDVAASEF
Sbjct: 193 LKGVIKAKYGKDATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKVVIGMDVAASEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
Y ++ YDL+FK + D ++ ++G+ L +Y+SFI ++P+VSIEDPFDQDDW
Sbjct: 253 Y--RNGKYDLDFKSPD-DPARHITGEKLGELYKSFIKNYPVVSIEDPFDQDDWATWTSFL 309
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G ++QIVGDDL VTNPKR+ +A+++K CN LLLKVNQIGSVTESI+A K+++ GWG
Sbjct: 310 S--GVNIQIVGDDLTVTNPKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWG 367
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RIEE LG AI+AG
Sbjct: 368 VMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLMRIEEALGDKAIFAGR 427
Query: 243 KFRAP 247
KFR P
Sbjct: 428 KFRNP 432
>pdb|3OTR|A Chain A, 2.75 Angstrom Crystal Structure Of Enolase 1 From
Toxoplasma Gondii
pdb|3OTR|B Chain B, 2.75 Angstrom Crystal Structure Of Enolase 1 From
Toxoplasma Gondii
pdb|3OTR|C Chain C, 2.75 Angstrom Crystal Structure Of Enolase 1 From
Toxoplasma Gondii
pdb|3OTR|D Chain D, 2.75 Angstrom Crystal Structure Of Enolase 1 From
Toxoplasma Gondii
pdb|3OTR|E Chain E, 2.75 Angstrom Crystal Structure Of Enolase 1 From
Toxoplasma Gondii
pdb|3OTR|F Chain F, 2.75 Angstrom Crystal Structure Of Enolase 1 From
Toxoplasma Gondii
Length = 452
Score = 309 bits (792), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 145/245 (59%), Positives = 182/245 (74%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK KYG DATNVGDEGGFAPN+ + E LL AI GY GKI I D AASEF
Sbjct: 199 LKNVIKNKYGLDATNVGDEGGFAPNVATAEEALNLLVEAIKAAGYEGKIKIAFDAAASEF 258
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
Y +K YDL++K + + S+ ++G+ LK VY ++ +PI+S+EDPFDQDD+ + T
Sbjct: 259 YKQDEKKYDLDYKCKTKNASKHLTGEKLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFT 318
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
+G Q++GDD+LVTN R+EKA+K+K CN LLLKVNQIGSVTE+IEA +++++GWG
Sbjct: 319 KDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAIEACLLAQKSGWG 378
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
V SHRSGETED+FIADL VGL GQIK+G+PCRSERL KYNQL+RIEE LG +YAG
Sbjct: 379 VQVSHRSGETEDSFIADLVVGLRCGQIKSGSPCRSERLCKYNQLMRIEESLGADCVYAGE 438
Query: 243 KFRAP 247
FR P
Sbjct: 439 SFRHP 443
>pdb|1ELS|A Chain A, Catalytic Metal Ion Binding In Enolase: The Crystal
Structure Of Enolase-Mn2+-Phosphonoacetohydroxamate
Complex At 2.4 Angstroms Resolution
pdb|1NEL|A Chain A, Fluoride Inhibition Of Yeast Enolase: Crystal Structure Of
The Enolase-mg2+-f--pi Complex At 2.6-angstroms
Resolution
pdb|3ENL|A Chain A, Refined Structure Of Yeast Apo-Enolase At 2.25 Angstroms
Resolution
pdb|4ENL|A Chain A, Crystal Structure Of Holoenzyme Refined At 1.9 Angstroms
Resolution: Trigonal-Bipyramidal Geometry Of The Cation
Binding Site
pdb|5ENL|A Chain A, Inhibition Of Enolase: The Crystal Structures Of Enolase-
Ca2+-Phosphoglycerate And Enolase-Zn2+-Phosphoglycolate
Complexes At 2.2-Angstroms Resolution
pdb|6ENL|A Chain A, Inhibition Of Enolase: The Crystal Structures Of Enolase-
Ca2+-Phosphoglycerate And Enolase-Zn2+-Phosphoglycolate
Complexes At 2.2-Angstroms Resolution
pdb|7ENL|A Chain A, Mechanism Of Enolase: The Crystal Structure Of
Enolase-Mg2+- Phosphoglycerate(Slash)
Phosphoenolpyruvate Complex At 2.2-Angstroms Resolution
Length = 436
Score = 286 bits (731), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 180/243 (74%), Gaps = 4/243 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GK+ IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV DDL VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KFR 245
F
Sbjct: 429 NFH 431
>pdb|1L8P|A Chain A, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
pdb|1L8P|B Chain B, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
pdb|1L8P|C Chain C, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
pdb|1L8P|D Chain D, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
Length = 436
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 180/243 (74%), Gaps = 4/243 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GK+ IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV DDL VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KFR 245
F
Sbjct: 429 NFH 431
>pdb|1EBG|A Chain A, Chelation Of Ser 39 To Mg2+ Latches A Gate At The Active
Site Of Enolase: Structure Of The Bis(Mg2+) Complex Of
Yeast Enolase And The Intermediate Analog
Phosphonoacetohydroxamate At 2.1 Angstroms Resolution
pdb|1EBG|B Chain B, Chelation Of Ser 39 To Mg2+ Latches A Gate At The Active
Site Of Enolase: Structure Of The Bis(Mg2+) Complex Of
Yeast Enolase And The Intermediate Analog
Phosphonoacetohydroxamate At 2.1 Angstroms Resolution
pdb|1EBH|A Chain A, Octahedral Coordination At The High Affinity Metal Site In
Enolase; Crystallographic Analysis Of The Mg++-Enzyme
From Yeast At 1.9 Angstroms Resolution
pdb|1EBH|B Chain B, Octahedral Coordination At The High Affinity Metal Site In
Enolase; Crystallographic Analysis Of The Mg++-Enzyme
From Yeast At 1.9 Angstroms Resolution
pdb|1ONE|A Chain A, Yeast Enolase Complexed With An Equilibrium Mixture Of 2'-
Phosphoglyceate And Phosphoenolpyruvate
pdb|1ONE|B Chain B, Yeast Enolase Complexed With An Equilibrium Mixture Of 2'-
Phosphoglyceate And Phosphoenolpyruvate
pdb|2ONE|A Chain A, Asymmetric Yeast Enolase Dimer Complexed With Resolved 2'-
Phosphoglycerate And Phosphoenolpyruvate
pdb|2ONE|B Chain B, Asymmetric Yeast Enolase Dimer Complexed With Resolved 2'-
Phosphoglycerate And Phosphoenolpyruvate
pdb|2AL1|A Chain A, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
pdb|2AL1|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 180/243 (74%), Gaps = 4/243 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GK+ IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV DDL VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KFR 245
F
Sbjct: 429 NFH 431
>pdb|2AL2|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 286 bits (731), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 180/243 (74%), Gaps = 4/243 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GK+ IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV DDL VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KFR 245
F
Sbjct: 429 NFH 431
>pdb|1P43|A Chain A, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
pdb|1P43|B Chain B, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
Length = 436
Score = 285 bits (730), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/243 (59%), Positives = 180/243 (74%), Gaps = 4/243 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GK+ IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV DDL VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KFR 245
F
Sbjct: 429 NFH 431
>pdb|3QTP|A Chain A, Crystal Structure Analysis Of Entamoeba Histolytica
Enolase
pdb|3QTP|B Chain B, Crystal Structure Analysis Of Entamoeba Histolytica
Enolase
Length = 441
Score = 285 bits (728), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/245 (60%), Positives = 176/245 (71%), Gaps = 4/245 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VIK KYGQDATNVGDEGGFAPN+ + E +LL AIAK GY GKI I MD AASEF
Sbjct: 195 LKVVIKAKYGQDATNVGDEGGFAPNVSGAREALDLLVEAIAKAGYTGKIEIAMDCAASEF 254
Query: 63 YDSKDKTYDLNFK--EENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAE 120
Y+ + K YDL K + D S DGL Y + +PI SIEDPF +DDW +
Sbjct: 255 YNEETKKYDLGKKIPADKKDPSLVKDVDGLIAEYVDYGKHYPIASIEDPFAEDDWAAWNK 314
Query: 121 LTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180
T + G + QIVGDDLLVTNP RV+ A+ + CN++L+KVNQIG++TE+ + +KM++ G
Sbjct: 315 FTVEHG-NFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTETFKTIKMAQEKG 373
Query: 181 WGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYA 240
WGVMASHRSGETEDTFIADL VGL QIKTGAPCRSERL KYNQL+RIEEELG YA
Sbjct: 374 WGVMASHRSGETEDTFIADLVVGLNCKQIKTGAPCRSERLCKYNQLMRIEEELGNIP-YA 432
Query: 241 GTKFR 245
G +R
Sbjct: 433 GKNWR 437
>pdb|1P48|A Chain A, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
pdb|1P48|B Chain B, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
Length = 436
Score = 284 bits (727), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/243 (59%), Positives = 180/243 (74%), Gaps = 4/243 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGD+GG APNIQ + E +L+ AI G+ GK+ IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDQGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV DDL VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KFR 245
F
Sbjct: 429 NFH 431
>pdb|2XGZ|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321r Mutant Of Yeast Enolase 1
pdb|2XGZ|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321r Mutant Of Yeast Enolase 1
Length = 443
Score = 284 bits (727), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 179/242 (73%), Gaps = 4/242 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GKI IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKIKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV D L VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADRLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KF 244
F
Sbjct: 429 NF 430
>pdb|2XH0|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
Length = 443
Score = 284 bits (726), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 179/242 (73%), Gaps = 4/242 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GKI IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKIKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV D L VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADRLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KF 244
F
Sbjct: 429 NF 430
>pdb|2XH4|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 284 bits (726), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 179/242 (73%), Gaps = 4/242 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GKI IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKIKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV D L VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADALTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KF 244
F
Sbjct: 429 NF 430
>pdb|2XH7|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The D321a Mutant Of Yeast Enolase 1
pdb|2XH7|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 284 bits (726), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 179/242 (73%), Gaps = 4/242 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GKI IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKIKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV D L VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADALTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KF 244
F
Sbjct: 429 NF 430
>pdb|2XH2|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 284 bits (726), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/242 (59%), Positives = 179/242 (73%), Gaps = 4/242 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GKI IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKIKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV D L VTNPKR+ AI++K +ALLLKVNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADALTVTNPKRIATAIEKKAADALLLKVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KF 244
F
Sbjct: 429 NF 430
>pdb|2AL2|A Chain A, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 283 bits (725), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/243 (59%), Positives = 179/243 (73%), Gaps = 4/243 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++ KK+YG A NVGDEGG APNIQ + E +L+ AI G+ GK+ IG+D A+SEF
Sbjct: 193 LKSLTKKRYGASAGNVGDEGGVAPNIQTAEEALDLIVDAIKAAGHDGKVKIGLDCASSEF 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
+ KD YDL+FK N+D S+ ++G L ++Y S + +PIVSIEDPF +DDWE +
Sbjct: 253 F--KDGKYDLDFKNPNSDKSKWLTGPQLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFF 310
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
G +QIV DDL VTNPKR+ AI++K +ALLL VNQIG+++ESI+A + S AGWG
Sbjct: 311 KTAG--IQIVADDLTVTNPKRIATAIEKKAADALLLAVNQIGTLSESIKAAQDSFAAGWG 368
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
VM SHRSGETEDTFIADL VGL TGQIKTGAP RSERLAK NQLLRIEEELG A++AG
Sbjct: 369 VMVSHRSGETEDTFIADLVVGLRTGQIKTGAPARSERLAKLNQLLRIEEELGDNAVFAGE 428
Query: 243 KFR 245
F
Sbjct: 429 NFH 431
>pdb|4G7F|A Chain A, Crystal Structure Of Enolase From Trypanosoma Cruzi
Length = 429
Score = 270 bits (690), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 135/237 (56%), Positives = 168/237 (70%), Gaps = 3/237 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+++IKKKYGQDA NVGDEGGFAP I + E +L AI + G+ G+ I MD AASE
Sbjct: 190 LKSIIKKKYGQDAVNVGDEGGFAPPITDINEPLPILMEAIEQAGHKGRFAICMDSAASET 249
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
YD K Y+L FK + V+ L Y ++S++PIVS+EDP+DQDD++ A +T
Sbjct: 250 YDENKKQYNLTFKSPE---ATWVTAKQLAETYAKWVSEYPIVSLEDPYDQDDFDGFAGIT 306
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
+ Q+VGDDL VTN R++ AI++K CN+LLLK+NQIG++TE+IEA K GW
Sbjct: 307 EALKGKAQVVGDDLTVTNVSRIKTAIEKKACNSLLLKINQIGTITEAIEASKFCMSNGWS 366
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIY 239
VM SHRSGETEDT+IADL VGL TGQIKTGAPCR ER AK NQLLRIEEELG A +
Sbjct: 367 VMVSHRSGETEDTYIADLVVGLGTGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKF 423
>pdb|1OEP|A Chain A, Structure Of Trypanosoma Brucei Enolase Reveals The
Inhibitory Divalent Metal Site
Length = 432
Score = 265 bits (677), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 167/237 (70%), Gaps = 3/237 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ +IKKKYGQDA NVGDEGGFAP I++ E +L AI + G+ GK I MD AASE
Sbjct: 193 LKGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGKFAICMDCAASET 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
YD K + Y+L FK V+ + L+ Y + D+PIVSIEDP+DQDD+ A +T
Sbjct: 253 YDEKKQQYNLTFKSPE---PTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGIT 309
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
+ QIVGDDL VTN +R++ AI++K CN+LLLK+NQIG+++E+I + K+ GW
Sbjct: 310 EALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWS 369
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIY 239
VM SHRSGETEDT+IADL V L +GQIKTGAPCR ER AK NQLLRIEEELG A +
Sbjct: 370 VMVSHRSGETEDTYIADLVVALGSGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKF 426
>pdb|2PTW|A Chain A, Crystal Structure Of The T. Brucei Enolase Complexed With
Sulphate, Identification Of A Metal Binding Site Iv
pdb|2PTX|A Chain A, Crystal Structure Of The T. Brucei Enolase Complexed With
Sulphate In Closed Conformation
pdb|2PTY|A Chain A, Crystal Structure Of The T. Brucei Enolase Complexed With
Pep
pdb|2PTZ|A Chain A, Crystal Structure Of The T. Brucei Enolase Complexed With
Phosphonoacetohydroxamate (Pah), His156-Out Conformation
pdb|2PU0|A Chain A, Crystal Structure Of The T. Brucei Enolase Complexed With
Phosphonoacetohydroxamate (Pah), His156-In Conformation
pdb|2PU1|A Chain A, Crystal Structure Of The T. Brucei Enolase Complexed With
Fluoro-Phosphonoacetohydroxamate (Fpah)
Length = 432
Score = 265 bits (677), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/237 (56%), Positives = 167/237 (70%), Gaps = 3/237 (1%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ +IKKKYGQDA NVGDEGGFAP I++ E +L AI + G+ GK I MD AASE
Sbjct: 193 LRGIIKKKYGQDAVNVGDEGGFAPPIKDINEPLPILMEAIEEAGHRGKFAICMDCAASET 252
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
YD K + Y+L FK V+ + L+ Y + D+PIVSIEDP+DQDD+ A +T
Sbjct: 253 YDEKKQQYNLTFKSPE---PTWVTAEQLRETYCKWAHDYPIVSIEDPYDQDDFAGFAGIT 309
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
+ QIVGDDL VTN +R++ AI++K CN+LLLK+NQIG+++E+I + K+ GW
Sbjct: 310 EALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKINQIGTISEAIASSKLCMENGWS 369
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIY 239
VM SHRSGETEDT+IADL V L +GQIKTGAPCR ER AK NQLLRIEEELG A +
Sbjct: 370 VMVSHRSGETEDTYIADLVVALGSGQIKTGAPCRGERTAKLNQLLRIEEELGAHAKF 426
>pdb|2PA6|A Chain A, Crystal Structure Of Mj0232 From Methanococcus Jannaschii
pdb|2PA6|B Chain B, Crystal Structure Of Mj0232 From Methanococcus Jannaschii
Length = 427
Score = 247 bits (630), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/245 (52%), Positives = 176/245 (71%), Gaps = 13/245 (5%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAASEF 62
L+ VI +KYG++A NVGDEGGFAP ++ S E +LL ++ K GY ++V +D AASEF
Sbjct: 195 LKNVILEKYGKNAVNVGDEGGFAPPLKTSREALDLLTESVKKAGYEDEVVFALDAAASEF 254
Query: 63 YDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELT 122
Y KD Y + K K++ + L + Y++ + ++PIVSIEDPF ++D+E A +T
Sbjct: 255 Y--KDGYYYVEGK--------KLTREELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMIT 304
Query: 123 GKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWG 182
++ +QIVGDDL VTN +R+ K I+ K NALLLKVNQIG+++E+++A +++ R G+G
Sbjct: 305 KEL--DIQIVGDDLFVTNVERLRKGIEMKAANALLLKVNQIGTLSEAVDAAQLAFRNGYG 362
Query: 183 VMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGT 242
V+ SHRSGETEDT IADLSV L +GQIKTGAP R ER AKYNQL+RIE+ELG + YAG
Sbjct: 363 VVVSHRSGETEDTTIADLSVALNSGQIKTGAPARGERTAKYNQLIRIEQELGLSK-YAGR 421
Query: 243 KFRAP 247
FR P
Sbjct: 422 NFRCP 426
>pdb|1IYX|A Chain A, Crystal Structure Of Enolase From Enterococcus Hirae
pdb|1IYX|B Chain B, Crystal Structure Of Enolase From Enterococcus Hirae
Length = 432
Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/243 (47%), Positives = 169/243 (69%), Gaps = 9/243 (3%)
Query: 3 LQAVIKKKYGQDATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYI-GK-IVIGMDVAAS 60
L A++K + AT+VGDEGGFAPN+ + EGFE++ AI K GY+ GK +V+ MD A+S
Sbjct: 189 LAAILKSR--GLATSVGDEGGFAPNLGSNEEGFEVIIEAIEKAGYVPGKDVVLAMDAASS 246
Query: 61 EFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAE 120
EFYD + Y L + G + + D + Y +S +PI+SIED D++DW+ +
Sbjct: 247 EFYDKEKGVYVLA-----DSGEGEKTTDEMIKFYEELVSKYPIISIEDGLDENDWDGFKK 301
Query: 121 LTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180
LT +G VQ+VGDDL VTN +++ + I++ N++L+KVNQIG++TE+ EA++M+K AG
Sbjct: 302 LTDVLGDKVQLVGDDLFVTNTQKLSEGIEKGIANSILIKVNQIGTLTETFEAIEMAKEAG 361
Query: 181 WGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYA 240
+ + SHRSGETED+ I+D++V GQIKTG+ R++R+AKYNQLLRIE++LG A Y
Sbjct: 362 YTAVVSHRSGETEDSTISDIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAEYK 421
Query: 241 GTK 243
G K
Sbjct: 422 GLK 424
>pdb|3UJ2|A Chain A, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
pdb|3UJ2|B Chain B, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
pdb|3UJ2|C Chain C, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
pdb|3UJ2|D Chain D, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
pdb|3UJ2|E Chain E, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
pdb|3UJ2|F Chain F, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
pdb|3UJ2|G Chain G, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
pdb|3UJ2|H Chain H, Crystal Structure Of An Enolase From Anaerostipes Caccae
(Efi Target Efi-502054) With Bound Mg And Sulfate
Length = 449
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 159/229 (69%), Gaps = 8/229 (3%)
Query: 15 ATNVGDEGGFAPNIQESYEGFELLKTAIAKGGY-IGK-IVIGMDVAASEFYDSKDKTYDL 72
AT+VGDEGGFAP++ E E + A+ GY G+ V+ MD A+SE+ K Y L
Sbjct: 223 ATSVGDEGGFAPDLASDEEAIEYILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYIL 282
Query: 73 NFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV 132
+K + + L ++S +PIVSIED D++DWE +T ++G +Q+V
Sbjct: 283 P------KCKRKFASEELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLV 336
Query: 133 GDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGET 192
GDDL VTN +R+ K IKE+ N++L+K+NQIG+V+E++EA+KM+ +AG+ + SHRSGET
Sbjct: 337 GDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAVVSHRSGET 396
Query: 193 EDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAG 241
EDT IADL+V L TGQIKTGAP RSER+AKYNQLLRIEEELG +A+Y G
Sbjct: 397 EDTTIADLAVALNTGQIKTGAPSRSERVAKYNQLLRIEEELGDSAVYPG 445
>pdb|4A3R|A Chain A, Crystal Structure Of Enolase From Bacillus Subtilis.
pdb|4A3R|B Chain B, Crystal Structure Of Enolase From Bacillus Subtilis.
pdb|4A3R|C Chain C, Crystal Structure Of Enolase From Bacillus Subtilis.
pdb|4A3R|D Chain D, Crystal Structure Of Enolase From Bacillus Subtilis
Length = 430
Score = 221 bits (562), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 159/228 (69%), Gaps = 8/228 (3%)
Query: 16 TNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIG--KIVIGMDVAASEFYDSKDKTYDLN 73
T VGDEGGFAPN+ + E + + AI K G+ ++ + MD A+SEFY+ +D Y L+
Sbjct: 200 TAVGDEGGFAPNLGSNEEALQTIVEAIEKAGFKPGEEVKLAMDAASSEFYNKEDGKYHLS 259
Query: 74 FKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG 133
+G K S + + + Y +S +PI+SIED D++DWE H LT ++G+ VQ+VG
Sbjct: 260 -----GEGVVKTSAE-MVDWYEELVSKYPIISIEDGLDENDWEGHKLLTERLGKKVQLVG 313
Query: 134 DDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETE 193
DDL VTN K++ + IK N++L+KVNQIG++TE+ +A++M+KRAG+ + SHRSGETE
Sbjct: 314 DDLFVTNTKKLSEGIKNGVGNSILIKVNQIGTLTETFDAIEMAKRAGYTAVISHRSGETE 373
Query: 194 DTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAG 241
D+ IAD++V GQIKTGAP R++R+AKYNQLLRIE++L A Y G
Sbjct: 374 DSTIADIAVATNAGQIKTGAPSRTDRVAKYNQLLRIEDQLAETAQYHG 421
>pdb|4EWJ|A Chain A, Structure Of The Enloase From Streptococcus Suis Serotype
2
pdb|4EWJ|B Chain B, Structure Of The Enloase From Streptococcus Suis Serotype
2
Length = 443
Score = 211 bits (537), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/229 (46%), Positives = 154/229 (67%), Gaps = 5/229 (2%)
Query: 16 TNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGK---IVIGMDVAASEFYDSKDKTYDL 72
T VGDEGGFAP + + +G E + AI GY I+IG D A+SEFYD + K YD
Sbjct: 200 TAVGDEGGFAPKFEGTEDGVETIIEAIEAAGYEAGENGIMIGFDCASSEFYDKERKVYDY 259
Query: 73 NFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIV 132
K E + + S + + + ++ +PI++IED D++DW+ LT ++G+ VQ+V
Sbjct: 260 T-KFEGEGAAVRTSAEQI-DYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKRVQLV 317
Query: 133 GDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGET 192
GDD VTN + + IKE N++L+KVNQIG++TE+ EA++M+K AG+ + SHRSGET
Sbjct: 318 GDDFFVTNTDYLARGIKEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGET 377
Query: 193 EDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAG 241
ED+ IAD++V GQIKTG+ R++R+AKYNQLLRIE++LG A+Y G
Sbjct: 378 EDSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAVYKG 426
>pdb|1W6T|A Chain A, Crystal Structure Of Octameric Enolase From Streptococcus
Pneumoniae
pdb|1W6T|B Chain B, Crystal Structure Of Octameric Enolase From Streptococcus
Pneumoniae
Length = 444
Score = 210 bits (534), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 156/230 (67%), Gaps = 4/230 (1%)
Query: 16 TNVGDEGGFAPNIQESYEGFELLKTAIAKGGYI-GK-IVIGMDVAASEFYDSKDKTYDLN 73
T VGDEGGFAP + + +G E + AI GY+ GK + +G D A+SEFYD + K YD
Sbjct: 210 TAVGDEGGFAPRFEGTEDGVETILAAIEAAGYVPGKDVFLGFDCASSEFYDKERKVYDYT 269
Query: 74 FKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG 133
K E + + S + + + ++ +PI++IED D++DW+ LT ++G+ VQ+VG
Sbjct: 270 -KFEGEGAAVRTSAEQI-DYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVG 327
Query: 134 DDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETE 193
DD VTN + + I+E N++L+KVNQIG++TE+ EA++M+K AG+ + SHRSGETE
Sbjct: 328 DDFFVTNTDYLARGIQEGAANSILIKVNQIGTLTETFEAIEMAKEAGYTAVVSHRSGETE 387
Query: 194 DTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTK 243
D+ IAD++V GQIKTG+ R++R+AKYNQLLRIE++LG A Y G K
Sbjct: 388 DSTIADIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDQLGEVAEYRGLK 437
>pdb|1E9I|A Chain A, Enolase From E.Coli
pdb|1E9I|B Chain B, Enolase From E.Coli
pdb|1E9I|C Chain C, Enolase From E.Coli
pdb|1E9I|D Chain D, Enolase From E.Coli
pdb|2FYM|A Chain A, Crystal Structure Of E. Coli Enolase Complexed With The
Minimal Binding Segment Of Rnase E.
pdb|2FYM|C Chain C, Crystal Structure Of E. Coli Enolase Complexed With The
Minimal Binding Segment Of Rnase E.
pdb|2FYM|D Chain D, Crystal Structure Of E. Coli Enolase Complexed With The
Minimal Binding Segment Of Rnase E.
pdb|2FYM|F Chain F, Crystal Structure Of E. Coli Enolase Complexed With The
Minimal Binding Segment Of Rnase E
Length = 431
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 151/230 (65%), Gaps = 9/230 (3%)
Query: 16 TNVGDEGGFAPNIQESYEGFELLKTAIAKGGY-IGK-IVIGMDVAASEFYDSKDKTYDLN 73
T VGDEGG+APN+ + E ++ A+ GY +GK I + MD AASEFY KD Y L
Sbjct: 203 TAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFY--KDGKYVLA 260
Query: 74 FKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG 133
+G++ + + + +PIVSIED D+ DW+ A T +G +Q+VG
Sbjct: 261 -----GEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVG 315
Query: 134 DDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETE 193
DDL VTN K +++ I++ N++L+K NQIGS+TE++ A+KM+K AG+ + SHRSGETE
Sbjct: 316 DDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETE 375
Query: 194 DTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTK 243
D IADL+VG A GQIKTG+ RS+R+AKYNQL+RIEE LG A Y G K
Sbjct: 376 DATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRK 425
>pdb|3H8A|A Chain A, Crystal Structure Of E. Coli Enolase Bound To Its Cognate
Rnase E Recognition Domain
pdb|3H8A|B Chain B, Crystal Structure Of E. Coli Enolase Bound To Its Cognate
Rnase E Recognition Domain
pdb|3H8A|C Chain C, Crystal Structure Of E. Coli Enolase Bound To Its Cognate
Rnase E Recognition Domain
pdb|3H8A|D Chain D, Crystal Structure Of E. Coli Enolase Bound To Its Cognate
Rnase E Recognition Domain
Length = 432
Score = 204 bits (520), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 151/230 (65%), Gaps = 9/230 (3%)
Query: 16 TNVGDEGGFAPNIQESYEGFELLKTAIAKGGY-IGK-IVIGMDVAASEFYDSKDKTYDLN 73
T VGDEGG+APN+ + E ++ A+ GY +GK I + MD AASEFY KD Y L
Sbjct: 204 TAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFY--KDGKYVLA 261
Query: 74 FKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVG 133
+G++ + + + +PIVSIED D+ DW+ A T +G +Q+VG
Sbjct: 262 -----GEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVG 316
Query: 134 DDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETE 193
DDL VTN K +++ I++ N++L+K NQIGS+TE++ A+KM+K AG+ + SHRSGETE
Sbjct: 317 DDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETE 376
Query: 194 DTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAGTK 243
D IADL+VG A GQIKTG+ RS+R+AKYNQL+RIEE LG A Y G K
Sbjct: 377 DATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRK 426
>pdb|3QN3|A Chain A, Phosphopyruvate Hydratase From Campylobacter Jejuni.
pdb|3QN3|B Chain B, Phosphopyruvate Hydratase From Campylobacter Jejuni.
pdb|3QN3|C Chain C, Phosphopyruvate Hydratase From Campylobacter Jejuni.
pdb|3QN3|D Chain D, Phosphopyruvate Hydratase From Campylobacter Jejuni
Length = 417
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 147/232 (63%), Gaps = 12/232 (5%)
Query: 3 LQAVIKKKYGQD--ATNVGDEGGFAPNIQESYEGFELLKTAIAKGGYIGKIVIGMDVAAS 60
+ A++KK+ +T +GDEGGFAPN+ + E +LL T I K GY ++ I +DVA++
Sbjct: 187 IYAILKKELANSGHSTALGDEGGFAPNLANNTEPIDLLMTCIKKAGYENRVKIALDVAST 246
Query: 61 EFYDSKDKTYDLNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAE 120
EF+ KD Y + K S + L Y + +PI SIED ++D+E +
Sbjct: 247 EFF--KDGKYHMEGK--------AFSSEALIERYVELCAKYPICSIEDGLAENDFEGWIK 296
Query: 121 LTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAG 180
LT K+G +Q+VGDDL VTN + + I +K NA+L+K NQIG++T+++ V++++R
Sbjct: 297 LTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNN 356
Query: 181 WGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEE 232
+ + SHRSGE+ED FIAD +V L TGQIKTGA R ER AKYN+LL IE E
Sbjct: 357 YKCVMSHRSGESEDAFIADFAVALNTGQIKTGALARGERTAKYNRLLEIEFE 408
>pdb|3TQP|A Chain A, Structure Of An Enolase (Eno) From Coxiella Burnetii
pdb|3TQP|B Chain B, Structure Of An Enolase (Eno) From Coxiella Burnetii
Length = 428
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 146/226 (64%), Gaps = 12/226 (5%)
Query: 18 VGDEGGFAPNIQESYEGFELLKTAIAKGGYI-GK-IVIGMDVAASEFYDSKDKTYDLNFK 75
VGDEGGFAP++ + FEL+ AI Y+ GK I + +D A+SE Y ++ YD
Sbjct: 204 VGDEGGFAPDLPNNEAAFELILEAIEDANYVPGKDIYLALDAASSELY--QNGRYDF--- 258
Query: 76 EENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDD 135
ENN + + D L + +P++SIED ++DW LT ++ VQ+VGDD
Sbjct: 259 -ENNQLTSEEXIDRLT----EWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDD 313
Query: 136 LLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDT 195
+ VTNP +EK IK+ NA+L+K+NQIG++TE++ V ++K +GV+ SHRSGETEDT
Sbjct: 314 IFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVIISHRSGETEDT 373
Query: 196 FIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGPAAIYAG 241
IADL+V QIKTG+ CRS+R+AKYN+LL+IE EL A YAG
Sbjct: 374 TIADLAVATDARQIKTGSLCRSDRVAKYNRLLQIERELNDQAPYAG 419
>pdb|3IK4|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
pdb|3IK4|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
pdb|3IK4|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
pdb|3IK4|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
LACTONIZING PROTEIN From Herpetosiphon Aurantiacus
Length = 365
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 102 PIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVN 161
P+V E P ++DW A++T + G V D + V + +E T + + +K+
Sbjct: 216 PMVLFEQPLPREDWAGMAQVTAQSGFA---VAADESARSAHDVLRIAREGTASVINIKLM 272
Query: 162 QIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATG 207
+ G V E ++ + +++ AG G+M G E S LA G
Sbjct: 273 KAG-VAEGLKMIAIAQAAGLGLMI---GGMVESILAMSFSANLAAG 314
>pdb|1MRA|A Chain A, Mandelate Racemase Mutant D270n Co-Crystallized With
(S)-Atrolactate
Length = 359
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+ IE+P Q D+E H + K+ VQ+ G++ L P+ + KA+ C + +
Sbjct: 217 VTWIEEPTLQHDYEGHQRIQSKLNVPVQM-GENWL--GPEEMFKALSIGACRLAMPNAMK 273
Query: 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA 198
IG VT I A ++++ G M+SH E +A
Sbjct: 274 IGGVTGWIRASALAQQFGIP-MSSHLFQEISAHLLA 308
>pdb|3UXK|A Chain A, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXK|B Chain B, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXK|C Chain C, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXK|D Chain D, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Benzohydroxamate
pdb|3UXL|A Chain A, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
pdb|3UXL|B Chain B, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
pdb|3UXL|C Chain C, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
pdb|3UXL|D Chain D, P. Putida Mandelate Racemase Co-Crystallized With The
Intermediate Analogue Cupferron
Length = 383
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+ IE+P Q D+E H + K+ VQ+ G++ L P+ + KA+ C + +
Sbjct: 241 VTWIEEPTLQHDYEGHQRIQSKLNVPVQM-GENWL--GPEEMFKALSIGACRLAMPDAMK 297
Query: 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA 198
IG VT I A ++++ G M+SH E +A
Sbjct: 298 IGGVTGWIRASALAQQFGIP-MSSHLFQEISAHLLA 332
>pdb|1MNS|A Chain A, On The Role Of Lysine 166 In The Mechanism Of Mandelate
Racemase From Pseudomonas Putida: Mechanistic And
Crystallographic Evidence For Stereospecific Alkylation
By (R)-Alpha-Phenylglycidate
pdb|2MNR|A Chain A, Mechanism Of The Reaction Catalyzed By Mandelate Racemase.
2. Crystal Structure Of Mandelate Racemase At 2.5
Angstroms Resolution: Identification Of The Active Site
And Possible Catalytic Residues
Length = 357
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+ IE+P Q D+E H + K+ VQ+ G++ L P+ + KA+ C + +
Sbjct: 215 VTWIEEPTLQHDYEGHQRIQSKLNVPVQM-GENWL--GPEEMFKALSIGACRLAMPDAMK 271
Query: 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA 198
IG VT I A ++++ G M+SH E +A
Sbjct: 272 IGGVTGWIRASALAQQFGIP-MSSHLFQEISAHLLA 306
>pdb|1MDL|A Chain A, Mandelate Racemase Mutant K166r Co-Crystallized With (R)-
Mandelate
Length = 359
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+ IE+P Q D+E H + K+ VQ+ G++ L P+ + KA+ C + +
Sbjct: 217 VTWIEEPTLQHDYEGHQRIQSKLNVPVQM-GENWL--GPEEMFKALSIGACRLAMPDAMK 273
Query: 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA 198
IG VT I A ++++ G M+SH E +A
Sbjct: 274 IGGVTGWIRASALAQQFGIP-MSSHLFQEISAHLLA 308
>pdb|1MDR|A Chain A, The Role Of Lysine 166 In The Mechanism Of Mandelate
Racemase From Pseudomonas Putida: Mechanistic And
Crystallographic Evidence For Stereospecific Alkylation
By (r)-alpha-phenylglycidate
Length = 359
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+ IE+P Q D+E H + K+ VQ+ G++ L P+ + KA+ C + +
Sbjct: 217 VTWIEEPTLQHDYEGHQRIQSKLNVPVQM-GENWL--GPEEMFKALSIGACRLAMPDAMK 273
Query: 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA 198
IG VT I A ++++ G M+SH E +A
Sbjct: 274 IGGVTGWIRASALAQQFGIP-MSSHLFQEISAHLLA 308
>pdb|1DTN|A Chain A, Mandelate Racemase Mutant D270n Co-crystallized With
(s)-atrolactate
Length = 359
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+ IE+P Q D+E H + K+ VQ+ G++ L P+ + KA+ C + +
Sbjct: 217 VTWIEEPTLQHDYEGHQRIQSKLNVPVQM-GENWL--GPEEMFKALSIGACRLAMPDAMK 273
Query: 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIA 198
IG VT I A ++++ G M+SH E +A
Sbjct: 274 IGGVTGWIRASALAQQFGIP-MSSHLFQEISAHLLA 308
>pdb|3S5S|A Chain A, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme (PsiCOM TARGET 200551) FROM SORANGIUM
CELLULOSUM
pdb|3S5S|B Chain B, Crystal Structure Of Putative Mandelate RacemaseMUCONATE
LACTONIZING Enzyme (PsiCOM TARGET 200551) FROM SORANGIUM
CELLULOSUM
Length = 389
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+ +E P +DDW+ E+T + G V + RV N L+K
Sbjct: 218 VALLEQPVPRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK--- 274
Query: 163 IGSVTESIEAVKMSKRAGWGVM 184
G + E+++ +++ AG G+M
Sbjct: 275 -GGIAEALDIAAVARAAGLGLM 295
>pdb|1WUE|A Chain A, Crystal Structure Of Protein Gi:29375081, Unknown Member
Of Enolase Superfamily From Enterococcus Faecalis V583
pdb|1WUE|B Chain B, Crystal Structure Of Protein Gi:29375081, Unknown Member
Of Enolase Superfamily From Enterococcus Faecalis V583
Length = 386
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALL 157
+ + + IE PF DD+ HA+L ++ + + D + + K + A+ +C ++
Sbjct: 224 LDHYQLAMIEQPFAADDFLDHAQLQRELKTRICL---DENIRSLKDCQVALALGSCRSIN 280
Query: 158 LKVNQIGSVTESIE 171
LK+ ++G + E+++
Sbjct: 281 LKIPRVGGIHEALK 294
>pdb|1T7P|A Chain A, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|A Chain A, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|A Chain A, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|A Chain A, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|A Chain A, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|C Chain C, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|A Chain A, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|A Chain A, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|A Chain A, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|A Chain A, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|A Chain A, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|A Chain A, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|A Chain A, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|A Chain A, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|A Chain A, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|A Chain A, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide
Length = 698
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 135 DLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT---ESIEAVKMSKRAGWGVMASHRSGE 191
D++VT +EK + +K + +G T ES+EAV + RA W + R+G
Sbjct: 168 DVVVTK-ALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGF 226
Query: 192 TEDT-FIADLSVGLA 205
DT I +L V LA
Sbjct: 227 PFDTKAIEELYVELA 241
>pdb|1ZYQ|A Chain A, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
Length = 698
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 135 DLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT---ESIEAVKMSKRAGWGVMASHRSGE 191
D++VT +EK + +K + +G T ES+EAV + RA W + R+G
Sbjct: 168 DVVVTK-ALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGF 226
Query: 192 TEDT-FIADLSVGLA 205
DT I +L V LA
Sbjct: 227 PFDTKAIEELYVELA 241
>pdb|2AJQ|A Chain A, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|F Chain F, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
Length = 704
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 135 DLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVT---ESIEAVKMSKRAGWGVMASHRSGE 191
D++VT +EK + +K + +G T ES+EAV + RA W + R+G
Sbjct: 174 DVVVTK-ALLEKLLSDKHYFPPEIDFTDVGYTTFWSESLEAVDIEHRAAWLLAKQERNGF 232
Query: 192 TEDT-FIADLSVGLA 205
DT I +L V LA
Sbjct: 233 PFDTKAIEELYVELA 247
>pdb|3CB3|A Chain A, Crystal Structure Of L-talarate Dehydratase From
Polaromonas Sp. Js666 Complexed With Mg And L-glucarate
pdb|3CB3|B Chain B, Crystal Structure Of L-talarate Dehydratase From
Polaromonas Sp. Js666 Complexed With Mg And L-glucarate
pdb|3CB3|C Chain C, Crystal Structure Of L-talarate Dehydratase From
Polaromonas Sp. Js666 Complexed With Mg And L-glucarate
pdb|3CB3|D Chain D, Crystal Structure Of L-talarate Dehydratase From
Polaromonas Sp. Js666 Complexed With Mg And L-glucarate
Length = 393
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 103 IVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQ 162
+V IE+P D D E HA L + + G+ ++T+ I+ + + L+ +
Sbjct: 235 LVWIEEPLDAYDHEGHAALALQFDTPIA-TGE--MLTSAAEHGDLIRHRAADYLMPDAPR 291
Query: 163 IGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLA 205
+G +T ++ +++ AG ++A H F +L V LA
Sbjct: 292 VGGITPFLKIASLAEHAGL-MLAPH--------FAMELHVHLA 325
>pdb|3ZVI|A Chain A, Methylaspartate Ammonia Lyase From Clostridium
Tetanomorphum Mutant L384a
pdb|3ZVI|B Chain B, Methylaspartate Ammonia Lyase From Clostridium
Tetanomorphum Mutant L384a
Length = 438
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 104 VSIEDPFDQDDWEHH--------AELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNA 155
+ IE P D +D + AEL G+ G ++V D+ T + V+ K +
Sbjct: 270 LRIEGPMDVEDRQKQMEAMRDLRAELDGR-GVDAELVADEWCNT-VEDVKFFTDNKAGHM 327
Query: 156 LLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGA 213
+ +K +G V +A+ K G G ET + ++G+A G + A
Sbjct: 328 VQIKTPDLGGVNNIADAIMYCKANGMGAYCGGTCNETNRSAEVTTNIGMACGARQVAA 385
>pdb|2GGJ|A Chain A, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
pdb|2GGJ|B Chain B, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
pdb|2GGJ|C Chain C, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
pdb|2GGJ|D Chain D, The Mutant Y218c Of Deinococcus Radiodurans N-Acylamino
Acid Racemase
Length = 375
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 98 ISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQIVGDDLLVTNPKRVEKAIKEKTCNALL 157
+ ++ + IE P DD HAEL +I + + D V + KA+ +
Sbjct: 211 LDEYDLTCIEQPLAWDDLVDHAELARRIRTPLCL---DESVASASDARKALALGAGGVIN 267
Query: 158 LKVNQIGSVTES 169
LKV ++G ES
Sbjct: 268 LKVARVGGHAES 279
>pdb|3QNK|A Chain A, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|B Chain B, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|C Chain C, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
pdb|3QNK|D Chain D, Crystal Structure Of A Hypothetical Susd-Like Protein
(Bf3747) From Bacteroides Fragilis Nctc 9343 At 2.70 A
Resolution
Length = 517
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 72 LNFKEENNDGSQKVSGDGLKNVYRSFISDHPIVSIEDPFDQDDWEHHAELTGKIGRHVQI 131
L +E +D S D + + F ++ VS DP D D WE + K R +
Sbjct: 36 LQLQENRSDNSVSAQRDKYRASWFKF--NYDXVSASDPQDDDVWEDYYVKVRKCNRFFER 93
Query: 132 VG 133
+G
Sbjct: 94 IG 95
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.134 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,701,552
Number of Sequences: 62578
Number of extensions: 323640
Number of successful extensions: 726
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 626
Number of HSP's gapped (non-prelim): 56
length of query: 251
length of database: 14,973,337
effective HSP length: 96
effective length of query: 155
effective length of database: 8,965,849
effective search space: 1389706595
effective search space used: 1389706595
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.9 bits)